Psyllid ID: psy8771

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900----
Protein Sequence
MDTRCYVESPEEVFIILCPLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPHVNL
Secondary Structure (PSIPRED)
cccccEEcccEEEEEEEccccccccEEEEEEccccccccEEEEEEEcccEEEEEccccccccEEEEcccccccccEEEEEEEEEEcccEEcEEEEEEEEEEEccccEEccccccEEEcccccEEEEEEEEEccccEEEEEEccEEccccccEEEEEcEEEEEccccccEEEEEEEEEccccEEEEEEEEEEEccccccccccccccEEEEEEEccEEEEEEEccccccEEEEEEEEEccccccEEEEEcccccEEEEcccccccEEEEEEEEEcccccccccccEEEEEccccccccccccEEEEccccEEEEEEEccccccccEEEEEEEEEccEEEEEEccccccEEEEEEEEEEcccccccccccEEEEEccccccccccccccccccccEEEEEEEEcccccccEEEEEEEEEcccccccccccEEEEEEccccccEEEEcccccccEEEEEEEEEcccccccccccEEEEcccccccccccccEEEEccccEEEEEEEcccccccEEEEEEEEEEEccccccccEEEEEcccEEEEEEcccccccEEEEEEEEEcccccccccccEEEEEcccccccccccEEEEccccEEEEEEEccccccccEEEEEEEEEcccccccccEEEEEcccEEEEEEccccccccccEEEEEEEEccccccEEEEEEccEEEEEEcccccccEEEEEEEEEcccccccccccEEEEccccccccccccEEEEEccccEEEEEEEcccccccccEEEEEEEEEEEcccccccEEEEEcccccEEEEcccccccEEEEEEEEEcccccccccccEEEEccccccccccccccEEEcccccccEEEEEEEEccccEEEEccccEEEEEEcccccccEEEEEEEEEcccccccccccEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccEEEEccccccccccEEEEcccccccccEEEEEcccccEEEEEEcccccccEEEEEEEEEEccccccEEEEEEEEcccccEEEEEEEEEccccccccccccccEEEEcccEEEEEEEEccccccEEEEEEcccEccccccEEEEcEEEEEEEccccccEEEEEEEEcccccccccEEEEEcccccccccccccccEEEEccEEEEEEEEEccccccccEEEEEEEEccccccEEEEEccccEEEEEEcccccccEEEEEEEEEccccccccccEEEEccccccccccccEEEEEcccccEEEEEEccccccccEEEEEEEEEcccEEEEEEccccccEEEEEEEEEEccccccccccEEEEEccccccccccccEEEEEEEEEEEEEcccccccccccEEEEEEEEEccccccccccEEEEEEEcccEEEEEEEccccccEEEEEEEEEEccccccccccEEEEccccccccccccEEEEEEcccEEEEEEcccccccccEEEEEEEEEEcccccccEEEEEEccccEEEEEEccccccEEEEEEEEEEccccccccccEEEEcccccccccccEEEEEccccEEEEEEcccccccccEEEEEEEEEEcccccccEEEEEccccEEEEEEEccccccccEEEEEEEEEccccccEEEEEccccEEEEEcccccccEEEEEEEEEEccccccccccEEEEccccccccccccEEEEEccccEEEEEEcccccccccccEEEEEEEEEEccccccEEEEEEccccEEEEEEccccccEEEEEEEEEEccccccccccEEEEccccccccccccEEEccccccccccEEEEEEEccccEEEEEcccEEEEEEcccccccEEEEEEEEEEccccccccccEEEEccccccccccccc
Coil and Loop (DISEMBL)
mdtrcyvespeeVFIIlcplpplipgyilvtepgtaprdvqvrplssstmviqwdepetpngqithpptraaRSHARLAAQSVLRRGRLAHAVrqvadpvrrvppqfsipppallevmldsplnlscvavgspmpfvkwrkgqnieltpddklpvgrnvltldrvtesenyTCIAASVLGVIETSTIVKVQckyaplltlpvapldvkisEVTATSvrldwtypseTLLYYVIQykpkaantpyseISGIITTYYtvrnlspyteyEFYIIAVNnlgrgppsspavittgetepgtaprdvqvrplssstmviqwdepetpngqitakhHRRIGLVetysltglypntLYYIWLAaqsprgegattppipvrtkqygktpgfgeqAAKHHRRIGLVetysltglypntLYYIWLAaqsprgegattppipvrtkqygktpgfgeqalypnTLYYIWLAaqsprgegattppipvrtkqyepgtaprdvqvrplssstmviqwdepetpngqitgykvyytqdqslpmsawetqvvdnnqlttisdltphtIYTIRVQaftsvgpgplsapvlvktqqgvpsqprdlraVDIQETAVTLawskpthsgeniisyelywndtyakprdlravDIQETAVTLawskpthsgeniisyelywndtyAKAKHHRRIGLVetysltglypntLYYIWLAaqsprgegattppipvrtkqyvpgappqnvsceplsstsiriswepppversnghivYYKLQFvetgrsdseasiVTLKNQTSFVLDELKKWTEYRIWVLAgtsigdgpssypitirtheddpsevcptqndfrknkktngsnfkggylndpmrfdvsdggalelnvtglqpdtIYTIQVAALtrkgdgdrskpetiktpggvpnrphvnl
Flexible Loop (DISEMBL)
mdtrcyvesPEEVFIILCPLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVrqvadpvrrvpPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNieltpddklpvgrNVLTldrvtesenyTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTatsvrldwtypSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITtgetepgtaprdvqvrpLSSSTMVIQwdepetpngqitakhhRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIpvrtkqyepgtaprdvqvrplSSSTMVIqwdepetpngqiTGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVtlawskpthsgeniiSYELYWNDTYAKPRDLRAVDIQETAVtlawskpthsgenIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISwepppversngHIVYYKLQFVETGRSDSeasivtlknqtsfVLDELKKWTEYRIWVLagtsigdgpsSYPITIRtheddpsevcptqndfrknkktngsnfkggylndPMRFDVSDGGALELNVTGLQPDTIYTIQVAAltrkgdgdrskpetiktpggvpnrphvnl
Low Complexity Region (SEG)
MDTRCYVESPEEVFiilcplpplipgyilVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPHVNL
Disordered region (IsUnstruct)
****CYVESPEEVFIILCPLPPLIPGYILVTEPG****************************************************GRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG***********************************************ITAKHHRRIGLVETYSLTGLYPNTLYYIWLAA******************************AKHHRRIGLVETYSLTGLYPNTLYYIWLAA*******************YGKTPGFGEQALYPNTLYYIWLAA***************************************VIQW******NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVK***********LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAA***************************************************NGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG***YPI********************************GYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALT***************************
Disordered Region (DISOPRED)
*DTRCYVESPEEVFIILCPLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPE***GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQ*****************NLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKY**********LDVKISEVTATSVRLDWTYPSETLLYYVIQYKPK***********IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT*******APRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK**************************LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPV**********PRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQ****************NQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY****PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITI****************FRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPE****************
Disordered Region (DISEMBL)
********SPEEVFIILCPLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITHP***********AAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTP*********HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALT**********ETIKTPGGVPNRPHVNL
Disordered Region (DISPRO)
*DTRCYVESPEEVFIILCPLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGG*PNR*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDTRCYVESPEEVFIILCPLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPHVNL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	904	2.2.26 [Sep-21-2011]
P16621	2029	Tyrosine-protein phosphat	yes	N/A	0.460	0.205	0.549	1e-140
P10586	1907	Receptor-type tyrosine-pr	yes	N/A	0.788	0.373	0.334	1e-91
A7MBJ4	1898	Receptor-type tyrosine-pr	yes	N/A	0.775	0.369	0.337	7e-90
P23468	1912	Receptor-type tyrosine-pr	no	N/A	0.794	0.375	0.316	3e-88
Q64604	1898	Receptor-type tyrosine-pr	yes	N/A	0.779	0.371	0.325	2e-87
Q64605	1907	Receptor-type tyrosine-pr	no	N/A	0.788	0.373	0.319	1e-82
Q64487	1912	Receptor-type tyrosine-pr	yes	N/A	0.689	0.325	0.313	3e-82
B0V2N1	1907	Receptor-type tyrosine-pr	yes	N/A	0.662	0.314	0.343	5e-82
A2A8L5	1898	Receptor-type tyrosine-pr	no	N/A	0.799	0.380	0.289	7e-82
A4IFW2	1909	Receptor-type tyrosine-pr	no	N/A	0.761	0.360	0.307	6e-78

>sp|P16621|LAR_DROME Tyrosine-protein phosphatase Lar OS=Drosophila melanogaster GN=Lar PE=1 SV=2

 Score =  501 bits (1289), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/484 (54%), Positives = 323/484 (66%), Gaps = 68/484 (14%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE 504
           +AL P T Y  ++ A +  G G  + P    T + +  +APR+VQVR LSSSTMVI W+ 
Sbjct: 380 RALSPYTEYEFYVIAVNNIGRGPPSAPATCTTGETKMESAPRNVQVRTLSSSTMVITWEP 439

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGP 564
           PETPNGQ+TGYKVYYT + + P ++W +Q+VDN++LTT+S+LTPH IYT+RVQA+TS+G 
Sbjct: 440 PETPNGQVTGYKVYYTTNSNQPEASWNSQMVDNSELTTVSELTPHAIYTVRVQAYTSMGA 499

Query: 565 GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP 624
           GP+S PV VK QQGVPSQP +                                       
Sbjct: 500 GPMSTPVQVKAQQGVPSQPSNF-------------------------------------- 521

Query: 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYP 684
              RA DI ETAVTL W+KPTHS ENI+ YELYWNDTYA   HH+RI   E Y+L GLYP
Sbjct: 522 ---RATDIGETAVTLQWTKPTHSSENIVHYELYWNDTYANQAHHKRISNSEAYTLDGLYP 578

Query: 685 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER 744
           +TLYYIWLAA+S RGEGATTPPIPVRTKQYVPGAPP+N++    SST+I +SW PPPVER
Sbjct: 579 DTLYYIWLAARSQRGEGATTPPIPVRTKQYVPGAPPRNITAIATSSTTISLSWLPPPVER 638

Query: 745 SNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSS 804
           SNG I+YYK+ FVE GR D EA+ +TL N TS VLDELK+WTEY+IWVLAGTS+GDGP S
Sbjct: 639 SNGRIIYYKVFFVEVGREDDEATTMTL-NMTSIVLDELKRWTEYKIWVLAGTSVGDGPRS 697

Query: 805 YPITIRTHED---DPSEVCPT------------------QNDFRKNKKTNGSNFKG---G 840
           +PI +RT ED   DP +V  T                  +N   +    +    +    G
Sbjct: 698 HPIILRTQEDVPGDPQDVKATPLNSTSIHVSWKPPLEKDRNGIIRGYHIHAQELRDEGKG 757

Query: 841 YLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
           +LN+P +FDV D   LE NVTGLQPDT Y+IQVAALTRKGDGDRS    +KTPGGVP RP
Sbjct: 758 FLNEPFKFDVVD--TLEFNVTGLQPDTKYSIQVAALTRKGDGDRSAAIVVKTPGGVPVRP 815

Query: 901 HVNL 904
            V+L
Sbjct: 816 TVSL 819

Possible cell adhesion receptor. It possesses an intrinsic protein tyrosine phosphatase activity (PTPase). It controls motor axon guidance.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8

>sp|P10586|PTPRF_HUMAN Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens GN=PTPRF PE=1 SV=2

 Score =  338 bits (866), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 281/841 (33%), Positives = 406/841 (48%), Gaps = 128/841 (15%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           VRRV P+FSIPP +  EVM    +NL+CVAVG+PMP+VKW  G   ELT +D++PVGRNV
Sbjct: 227 VRRVAPRFSIPPSSQ-EVMPGGSVNLTCVAVGAPMPYVKWMMGAE-ELTKEDEMPVGRNV 284

Query: 160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
           L L  V  S NYTC+A S LG+IE +  V V+        LP  P+D+ ++E TATSV L
Sbjct: 285 LELSNVVRSANYTCVAISSLGMIEATAQVTVKA-------LPKPPIDLVVTETTATSVTL 337

Query: 220 DW-TYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
            W +  SE + YY IQY+      P+ E+ G+ TT Y++  LSP++EY F ++AVN++GR
Sbjct: 338 TWDSGNSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGR 397

Query: 279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------- 327
           GPPS      TGE  P + PR VQ R LS+STM++QW+ PE PNG +             
Sbjct: 398 GPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRR 457

Query: 328 ------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPG 381
                 KH+   GL+ T  +  L P   Y + + A +  G+G  +P I V+T+Q     G
Sbjct: 458 PPNAWHKHNTDAGLLTT--VGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQ-----G 510

Query: 382 FGEQAAKHHRRIGLVETYSLTGLYP---NTLYY--IWLAAQSPRGEGATTPPIPVRTKQY 436
              Q A     +       L+ L P     + Y  ++ AA+    +   T         +
Sbjct: 511 VPAQPADFQAEVESDTRIQLSWLLPPQERIIMYELVYWAAEDEDQQHKVT---------F 561

Query: 437 GKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSS 496
             T  +  + L P+TLY   LAA+S  G G  TP I  RT Q  P   P+ V    + S+
Sbjct: 562 DPTSSYTLEDLKPDTLYRFQLAARSDMGVGVFTPTIEARTAQSTPSAPPQKVMCVSMGST 621

Query: 497 TMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVD----NNQLTTISDLTPHT 550
           T+ + W  P  ++ NG IT Y V Y   +++        VVD     +    +  L   T
Sbjct: 622 TVRVSWVPPPADSRNGVITQYSVAY---EAVDGEDRGRHVVDGISREHSSWDLVGLEKWT 678

Query: 551 IYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAWSKPTHSGEN 609
            Y + V+A T VGPGP S+PVLV+T + VPS  PR +    +  TAV + W  P  S ++
Sbjct: 679 EYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNSTAVHVYWKLPVPSKQH 738

Query: 610 --IISYEL-YWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK 666
             I  Y++ Y      +PR L    IQ+  +  A  +P  S +    YE           
Sbjct: 739 GQIRGYQVTYVRLENGEPRGLPI--IQDVMLAEAQWRPEESED----YET---------- 782

Query: 667 HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCE 726
                      +++GL P T Y + +AA + +G+GA + P  V T   VPG P   +S  
Sbjct: 783 -----------TISGLTPETTYSVTVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMISTT 831

Query: 727 PLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA--SIVTLKNQTSFVLDELKK 784
            +++  ++  W PP  +   G ++ Y+LQ+    R+D     +I   K+   F +  L K
Sbjct: 832 AMNTALLQ--WHPP--KELPGELLGYRLQYC---RADEARPNTIDFGKDDQHFTVTGLHK 884

Query: 785 WTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNG---------- 834
            T Y   + A    G G   +   IRT ED PS        F +N    G          
Sbjct: 885 GTTYIFRLAAKNRAGLG-EEFEKEIRTPEDLPS-------GFPQNLHVTGLTTSTTELAW 936

Query: 835 -----SNFKGGYLNDPMRF-DVSDGGALE-------LNVTGLQPDTIYTIQVAALTRKGD 881
                +   G  ++  + F D++    L+         +TGL+PDT Y I+V A T KG 
Sbjct: 937 DPPVLAERNGRIISYTVVFRDINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGS 996

Query: 882 G 882
           G
Sbjct: 997 G 997

The first PTPase domain has enzymatic activity, while the second one seems to affect the substrate specificity of the first one.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|A7MBJ4|PTPRF_BOVIN Receptor-type tyrosine-protein phosphatase F OS=Bos taurus GN=PTPRF PE=2 SV=1

 Score =  332 bits (852), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 285/844 (33%), Positives = 403/844 (47%), Gaps = 143/844 (16%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           VRRV P+FSIPP +  EVM    +NL+CVAVG+PMP+VKW  G   ELT +D++PVGRNV
Sbjct: 227 VRRVAPRFSIPPSSQ-EVMPGGSVNLTCVAVGAPMPYVKWMMGAE-ELTKEDEMPVGRNV 284

Query: 160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
           L L  V  S NYTC+A S LG+IE +  V V+        LP  P+D+ ++E TATSV L
Sbjct: 285 LELSNVVRSANYTCVAISSLGMIEATAQVTVKA-------LPKPPIDLVVTETTATSVTL 337

Query: 220 DW-TYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
            W +  SE + YY IQY+P  A  P+ E+ G+ TT Y++  LSP++EY F ++AVN++GR
Sbjct: 338 TWDSGNSEPVSYYGIQYRPAGAEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGR 397

Query: 279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------- 327
           GPPS      TGE  P + PR VQ R LS+STM++QW+ PE PNG +             
Sbjct: 398 GPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRR 457

Query: 328 ------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPG 381
                 KH+   GL+ T  +  L P   Y + + A +  G+G  +P I V+T+Q     G
Sbjct: 458 PLSAWHKHNTDAGLLTT--VGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQ-----G 510

Query: 382 FGEQAAKHHRRIGLVETYSLTGLYP-------NTLYYIWLAAQSPRGEGATTPPIPVRTK 434
              Q A     +       L+ L P         L Y W A    +    T  P      
Sbjct: 511 VPAQPADFQAEVDSDTRIQLSWLLPPQERIVKYELVY-WAAEDEGQQHKVTFDP------ 563

Query: 435 QYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS 494
               T  +  + L P+TLY   LAA+S  G G  TP I  RT Q  P   P+ V    + 
Sbjct: 564 ----TSSYTVEDLKPDTLYRFQLAARSELGVGVFTPTIEARTAQSTPSAPPQKVTCVSVG 619

Query: 495 SSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVD----NNQLTTISDLTP 548
           S+T+ + W  P  ++ NG IT Y V Y   +++        VVD     +    +  L  
Sbjct: 620 STTVRVSWVPPPADSRNGVITQYSVAY---EAVDGEDRGRHVVDGIGREHSSWDLVGLEK 676

Query: 549 HTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAWSKPTHSG 607
            T Y + V+A T VGPGP S+PVLV+T + VPS  PR +    +  TAV ++W  P  S 
Sbjct: 677 WTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNSTAVRVSWKLPVPSK 736

Query: 608 EN--IISYEL-YWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK 664
           ++  I  Y++ Y      +PR   A  IQ+  V LA ++ T                   
Sbjct: 737 QHGQIRGYQVTYVRLENGEPRG--APIIQD--VMLAEAQET------------------- 773

Query: 665 AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVS 724
                        +++GL P T Y I +AA + +G+GA + P  V T   VPG P   VS
Sbjct: 774 -------------TISGLTPETTYSITVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMVS 820

Query: 725 CEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL---KNQTSFVLDE 781
              +++  ++  W PP  +   G ++ Y+LQ+    R   EA   T+   K+   F +  
Sbjct: 821 TTAMNTALLQ--WHPP--KELPGELLGYRLQY----RRADEARPSTIDFGKDDQHFTVTG 872

Query: 782 LKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNG------- 834
           L K   Y   + A    G G   +   I T ED PS        F +N +  G       
Sbjct: 873 LHKGATYIFRLTAKNRAGLG-EEFEKEITTPEDVPS-------GFPQNLRVIGLTTSTTE 924

Query: 835 --------SNFKGGYLNDPMRF-DVSDGGALE-------LNVTGLQPDTIYTIQVAALTR 878
                   +   G   N  + + D++    L+       L ++GL+PDT Y I+V A T 
Sbjct: 925 LIWDPPVLAERNGRITNYTVVYRDINSQQELQNVTADTHLTLSGLKPDTTYDIKVRARTS 984

Query: 879 KGDG 882
           KG G
Sbjct: 985 KGAG 988

The first PTPase domain has enzymatic activity, while the second one seems to affect the substrate specificity of the first one.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|P23468|PTPRD_HUMAN Receptor-type tyrosine-protein phosphatase delta OS=Homo sapiens GN=PTPRD PE=1 SV=2

 Score =  327 bits (837), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 269/851 (31%), Positives = 404/851 (47%), Gaps = 133/851 (15%)

Query: 93   VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK 152
            VR++ + VRRVPP+FSIPP    E+M    +N++CVAVGSPMP+VKW  G   +LTP+D 
Sbjct: 225  VRELRE-VRRVPPRFSIPPTNH-EIMPGGSVNITCVAVGSPMPYVKWMLGAE-DLTPEDD 281

Query: 153  LPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEV 212
            +P+GRNVL L+ V +S NYTC+A S LGVIE    + V+        LP  P    ++E 
Sbjct: 282  MPIGRNVLELNDVRQSANYTCVAMSTLGVIEAIAQITVKA-------LPKPPGTPVVTES 334

Query: 213  TATSVRLDWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYII 271
            TATS+ L W   + E + YY+IQ+KPK +   Y EI G+ TT Y+V  LSPY++YEF ++
Sbjct: 335  TATSITLTWDSGNPEPVSYYIIQHKPKNSEELYKEIDGVATTRYSVAGLSPYSDYEFRVV 394

Query: 272  AVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA---- 327
            AVNN+GRGPPS P +  T E  P +APRDVQ R LSS+T+++QW EPE PNGQI      
Sbjct: 395  AVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVY 454

Query: 328  -------------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
                         KH+  +   +  ++  L P   Y + + A +  G+G  +  I V T+
Sbjct: 455  YTMDPTQHVNNWMKHN--VADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQ 512

Query: 375  QY--GKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVR 432
                G+   F  +                    P +   I L+   PR +      +  +
Sbjct: 513  TGVPGQPLNFKAE--------------------PESETSILLSWTPPRSDTIANYELVYK 552

Query: 433  TKQYGKT------PG--FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTA 484
              ++G+       PG  +  Q L PN+LYY  LAA+SP+G GA+T  I  RT Q +P   
Sbjct: 553  DGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAP 612

Query: 485  PRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT- 541
            P+D+     SS+++++ W  P  E  NG IT Y + YT          E   + ++    
Sbjct: 613  PQDISCTSPSSTSILVSWQPPPVEKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKY 672

Query: 542  TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAW 600
             +  L   T Y I V A T VGPGP S  VL++T + VPS  PR +    +  T+V ++W
Sbjct: 673  LLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSW 732

Query: 601  SKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWND 660
              P  + ++                 +R   +    +     K     ++++  +  W  
Sbjct: 733  RSPVPNKQH---------------GQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQWE- 776

Query: 661  TYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
             +     H  I       ++GL P T Y + + A + +G+GA + P  V T   VPG P 
Sbjct: 777  -FDDTTEHDMI-------ISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKPR 828

Query: 721  QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE--ASIVTLKNQTSFV 778
              ++   +++  I+  W PP    + G +  Y+L+F   GR D E   ++   + +  F 
Sbjct: 829  LVINHTQMNTALIQ--WHPPV--DTFGPLQGYRLKF---GRKDMEPLTTLEFSEKEDHFT 881

Query: 779  LDELKKWTEYRIWVLAGTSIGDGPSSYP-ITIRTHEDDPSEVCPTQNDFRKNKKTNGSNF 837
              ++ K   Y   + A   +G G      I+I      P EV PT   F +N  + G+  
Sbjct: 882  ATDIHKGASYVFRLSARNKVGFGEEMVKEISI------PEEV-PT--GFPQNLHSEGTTS 932

Query: 838  KGGYLN-DPMRFDVSDG-------------------------GALELNVTGLQPDTIYTI 871
                L+  P      +G                             + +TGL+PDT Y +
Sbjct: 933  TSVQLSWQPPVLAERNGIITKYTLLYRDINIPLLPMEQLIVPADTTMTLTGLKPDTTYDV 992

Query: 872  QVAALTRKGDG 882
            +V A T KG G
Sbjct: 993  KVRAHTSKGPG 1003

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q64604|PTPRF_RAT Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus GN=Ptprf PE=2 SV=1

 Score =  324 bits (830), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 273/840 (32%), Positives = 396/840 (47%), Gaps = 135/840 (16%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           VRRV P+FSIPP +  EVM    +NL+CVAVG+PMP+VKW  G   ELT +D++PVGRNV
Sbjct: 227 VRRVAPRFSIPPSSQ-EVMPGGNVNLTCVAVGAPMPYVKWMMGAE-ELTKEDEMPVGRNV 284

Query: 160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
           L L  V  S NYTC+A S LG+IE +  V V+        LP  P+D+ ++E TATSV L
Sbjct: 285 LELSNVMRSANYTCVAISSLGMIEATAQVTVKA-------LPKPPIDLVVTETTATSVTL 337

Query: 220 DW-TYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
            W +  +E + +Y IQY+    + P+ E+ G+ +T Y++  LSP++EY F ++AVN++GR
Sbjct: 338 TWDSGNTEPVSFYGIQYRAAGTDGPFQEVDGVASTRYSIGGLSPFSEYAFRVLAVNSIGR 397

Query: 279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------- 327
           GPPS      TGE  P + PR VQ R LS+STM++QW+ PE PNG +             
Sbjct: 398 GPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRR 457

Query: 328 ------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPG 381
                 KH+   GL+ T  +  L P   Y + + A +  G+G  +P I V+T+Q     G
Sbjct: 458 PLSAWHKHNTDAGLLTT--VGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQ-----G 510

Query: 382 FGEQAAKHHRRIGLVETYSLTGLYPNTLYYI------WLAAQSPRGEGATTPPIPVRTKQ 435
              Q A    +        L+ L P     I      W A    +    T  P       
Sbjct: 511 VPAQPADFQAKAESDTRIQLSWLLPPQERIIKYELVYWAAEDEGQQHKVTFDP------- 563

Query: 436 YGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSS 495
              T  +  + L P+TLY+  LAA+S  G G  TP +   T Q  P   P+ V      S
Sbjct: 564 ---TSSYTLEDLKPDTLYHFQLAARSDLGVGVFTPTVEACTAQSTPSAPPQKVTCVSTGS 620

Query: 496 STMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDN----NQLTTISDLTPH 549
           +T+ + W  P  ++ NG IT Y V Y   +++     +  VVD     +    +  L   
Sbjct: 621 TTVRVSWVPPPADSRNGIITQYSVAY---EAVDGEDRKRHVVDGISREHSSWDLLGLEKW 677

Query: 550 TIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP-RDLRAVDIQETAVTLAWSKPTHSGE 608
           T Y + V+A T VGPGP S+PVLV+T + VPS P R +    +  TAV ++W  P     
Sbjct: 678 TEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNSTAVHVSWKLPVP--- 734

Query: 609 NIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHH 668
                    N  + + R       Q T V L   +P   G+ II   +            
Sbjct: 735 ---------NKQHGQIRGY-----QVTYVRLENGEP--RGQPIIQDVM------------ 766

Query: 669 RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL 728
             +   +  +++GL P T Y I +AA + +G+GA + P  V T   VPG P   VS   +
Sbjct: 767 --LAEAQETTISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGRPTMMVSTTAM 824

Query: 729 SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL---KNQTSFVLDELKKW 785
            +  ++  W PP  +   G ++ Y+LQ+    R   EA   T+   K+   F +  L K 
Sbjct: 825 HTALLQ--WHPP--KELPGELLGYRLQY----RRADEARPNTIDFGKDDQHFTVTGLHKG 876

Query: 786 TEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNG----------- 834
             Y   + A    G G   +   I T ED PS        F +N +  G           
Sbjct: 877 ATYIFRLAAKNRAGPG-EEFEKEITTPEDAPS-------GFPQNLRVTGLTTSTTELAWD 928

Query: 835 -----------SNFKGGYLNDPMRFDVSD-GGALELNVTGLQPDTIYTIQVAALTRKGDG 882
                      +N+   Y +   + ++ +  G + L + GL+PDT Y I+V A T KG G
Sbjct: 929 PPVLAERNGRITNYTVVYRDINSQHELQNVTGDVHLTLLGLKPDTTYDIKVRAHTSKGAG 988

The first PTPase domain has enzymatic activity, while the second one seems to affect the substrate specificity of the first one.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q64605|PTPRS_RAT Receptor-type tyrosine-protein phosphatase S OS=Rattus norvegicus GN=Ptprs PE=1 SV=2

 Score =  308 bits (789), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 271/849 (31%), Positives = 398/849 (46%), Gaps = 136/849 (16%)

Query: 100  VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
            VRRV P+FSI P +  E+M    +N++CVAVGSPMP+VKW +G   +LTP+D +PVGRNV
Sbjct: 227  VRRVAPRFSILPMSH-EIMPGGNVNITCVAVGSPMPYVKWMQGAE-DLTPEDDMPVGRNV 284

Query: 160  LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
            L L  V +S NYTC+A S LGVIE    + V+       +LP AP    ++E TATS+ +
Sbjct: 285  LELTDVKDSANYTCVAMSSLGVIEAVAQITVK-------SLPKAPGTPVVTENTATSITV 337

Query: 220  DWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
             W   + + + YYVI+YK K+ + PY     I TT Y++  LSP +EYE ++ AVN++G+
Sbjct: 338  TWDSGNPDPVSYYVIEYKSKSQDGPYQIKEDITTTRYSIGGLSPNSEYEIWVSAVNSIGQ 397

Query: 279  GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------- 327
            GPPS   V  TGE  P +APR+VQ R LS++TM++QW+EP  PNG I             
Sbjct: 398  GPPSESVVTRTGEQAPASAPRNVQARMLSATTMIVQWEEPVEPNGLIRGYRVYYTMEPEH 457

Query: 328  ------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ-YGKTP 380
                  KH+    L+ T  +  L  +  Y + + A +  G+G  + PI V+T+Q     P
Sbjct: 458  PVGNWQKHNVDDSLLTT--VGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQP 515

Query: 381  GFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTP 440
                  AK    IGL  +        + + Y  L  +  RG            + +  T 
Sbjct: 516  MNLRAEAKSETSIGLSWSAPRQ---ESVIKYELLFREGDRGREV--------GRTFDPTT 564

Query: 441  GFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVI 500
             F  + L PNT Y   LAA+SP+G GA T  +  RT Q +P   P+DV+   L S+ +++
Sbjct: 565  AFVVEDLKPNTEYAFRLAARSPQGLGAFTAVVRQRTLQAKPSAPPQDVKCTSLRSTAILV 624

Query: 501  QWD--EPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT----ISDLTPHTIYTI 554
             W    PET NG + GY V Y   + L     + + V+N   TT    +  L   T Y +
Sbjct: 625  SWRPPPPETHNGALVGYSVRY---RPLGSEDPDPKEVNNIPPTTTQILLEALEKWTEYRV 681

Query: 555  RVQAFTSVGPGPLSAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAWSKPTHSGEN--II 611
               A+T VGPGP S+PV+V+T + VPS  PR + A  +  TA+ + W  PT   ++  I 
Sbjct: 682  TAVAYTEVGPGPESSPVVVRTDEDVPSAPPRKVEAEALNATAIRVLWRSPTPGRQHGQIR 741

Query: 612  SYELYW-----NDTYAKPR--DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK 664
             Y++++      +    PR  D+   D QE  +                           
Sbjct: 742  GYQVHYVRMEGAEARGPPRIKDIMLADAQEMVI--------------------------- 774

Query: 665  AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVS 724
                           T L P T Y I +AA + +G+GA + P  V TK  V G P  +V 
Sbjct: 775  ---------------TNLQPETAYSITVAAYTMKGDGARSKPKVVVTKGAVLGRPTLSVQ 819

Query: 725  CEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKN-QTSFVLDELK 783
              P  S   R  WE PP + +   ++ Y+LQF   GR D+  + + L   +  F     K
Sbjct: 820  QTPEGSLLAR--WE-PPADAAEDPVLGYRLQF---GREDAAPATLELAAWERRFAAPAHK 873

Query: 784  KWTE-YRIWVLAGTSIG-----------DGPSSYP-------------ITIRTHEDDPSE 818
              T  +R+       +G           D P  +P             + +R     P+E
Sbjct: 874  GATYVFRLAARGRAGLGEEASAALSIPEDAPRGFPQILGAAGNVSAGSVILRWLPPVPAE 933

Query: 819  VCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTR 878
                   +  + +  G+   G      +      G    L + GL+P+T Y ++V A TR
Sbjct: 934  RNGAIIKYTVSVREAGA--PGPATETELAAAAQPGAETALTLQGLRPETAYELRVRAHTR 991

Query: 879  KGDGDRSKP 887
            +G G  S P
Sbjct: 992  RGPGPFSPP 1000

Interacts with LAR-interacting protein LIP.1.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q64487|PTPRD_MOUSE Receptor-type tyrosine-protein phosphatase delta OS=Mus musculus GN=Ptprd PE=1 SV=3

 Score =  307 bits (786), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 240/766 (31%), Positives = 356/766 (46%), Gaps = 143/766 (18%)

Query: 93  VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK 152
           VR++ + VRRVPP+FSIPP    E+M    +N++CVAVGSPMP+VKW  G   +LTP+D 
Sbjct: 225 VRELRE-VRRVPPRFSIPPTNH-EIMPGGSVNITCVAVGSPMPYVKWMLGAE-DLTPEDD 281

Query: 153 LPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEV 212
           +P+GRNVL L+ V +S NYTC+A S LGVIE    + V+        LP  P    ++E 
Sbjct: 282 MPIGRNVLELNDVRQSANYTCVAMSTLGVIEAIAQITVKA-------LPKPPGTPVVTES 334

Query: 213 TATSVRLDWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYII 271
           TATS+ L W   + E + YY+IQ+KPK +  PY EI GI TT Y+V  LSPY++YEF ++
Sbjct: 335 TATSITLTWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGIATTRYSVAGLSPYSDYEFRVV 394

Query: 272 AVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA---- 327
           AVNN+GRGP S P +  T E  P +APRDVQ R LSS+T+++QW EPE PNGQI      
Sbjct: 395 AVNNIGRGPASEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVY 454

Query: 328 -------------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
                        KH+  +   +  ++  L P   Y + + A +  G+G  +  I V T+
Sbjct: 455 YTMDPTQHVNNWMKHN--VADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQ 512

Query: 375 QY--GKTPGF-------------------------------GEQAAKHHRRIGLVETYSL 401
               G+   F                               G+Q  +    I    +Y L
Sbjct: 513 TGVPGQPLNFKAEPESETSILLSWTPPRSDTIASYELVYRDGDQGEEQRITIEPGTSYRL 572

Query: 402 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQS 461
            GL PN+LYY  L+A+SP+G GA+T  I  R                             
Sbjct: 573 QGLKPNSLYYFRLSARSPQGLGASTAEISAR----------------------------- 603

Query: 462 PRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYY 519
                         T Q +P   P+D+     SS+++++ W  P  E  NG IT Y + Y
Sbjct: 604 --------------TMQSKPSAPPQDISCTSPSSTSILVSWQPPPVEKQNGIITEYSLKY 649

Query: 520 TQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQG 578
                      E   + ++     +  L   T Y I V A T VGPGP S  VL++T + 
Sbjct: 650 AAVDGEDFKPHEILGIPSDTTKYLLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTDED 709

Query: 579 VPSQ-PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAV 637
           VPS  PR +    +  TAV ++W  P  + ++                 +R   +    +
Sbjct: 710 VPSGPPRKVEVEAVNATAVKVSWRSPVPNKQH---------------GQIRGYQVHYVKM 754

Query: 638 TLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 697
                K     ++++  +  W   +     H  I       ++GL P T Y + + A + 
Sbjct: 755 ENGEPKGQPMLKDVMLADAQWE--FDDTTEHDMI-------ISGLQPETSYSLTVTAYTT 805

Query: 698 RGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFV 757
           +G+GA + P  V T   VPG P   ++   +++  I+  W PP    + G +  Y+L+F 
Sbjct: 806 KGDGARSKPKLVSTTGAVPGKPRLVINHTQMNTALIQ--WHPPV--DTFGPLQGYRLKF- 860

Query: 758 ETGRSDSE--ASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG 801
             GR D E   ++   + +  F   ++ K   Y   + A   +G G
Sbjct: 861 --GRKDMEPLTTLEFSEKEDHFTATDIHKGASYVFRLSARNKVGFG 904

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|B0V2N1|PTPRS_MOUSE Receptor-type tyrosine-protein phosphatase S OS=Mus musculus GN=Ptprs PE=1 SV=1

 Score =  306 bits (784), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 243/707 (34%), Positives = 351/707 (49%), Gaps = 108/707 (15%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           VRRV P+FSI P +  E+M    +N++CVAVGSPMP+VKW +G   +LTP+D +PVGRNV
Sbjct: 227 VRRVAPRFSILPMSH-EIMPGGNVNITCVAVGSPMPYVKWMQGAE-DLTPEDDMPVGRNV 284

Query: 160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
           L L  V +S NYTC+A S LGVIE    + V+       +LP AP    ++E TATS+ +
Sbjct: 285 LELTDVKDSANYTCVAMSSLGVIEAVAQITVK-------SLPKAPGTPVVTENTATSITV 337

Query: 220 DWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
            W   + + + YYVI+YK K+ + PY     I TT Y++  LSP +EYE ++ AVN++G+
Sbjct: 338 TWDSGNPDPVSYYVIEYKSKSQDGPYQIKEDITTTRYSIGGLSPNSEYEIWVSAVNSIGQ 397

Query: 279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------- 327
           GPPS   V  TGE  P +APR+VQ R LS++TM++QW+EP  PNG I             
Sbjct: 398 GPPSESVVTRTGEQAPASAPRNVQARMLSATTMIVQWEEPVEPNGLIRGYRVYYTMEPEH 457

Query: 328 ------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ-YGKTP 380
                 KH+    L+ T  +  L  +  Y + + A +  G+G  + PI V+T+Q     P
Sbjct: 458 PVGNWQKHNVDDSLLTT--VGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQP 515

Query: 381 GFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTP 440
                 AK    IGL  +        + + Y  L  +  RG            + +  T 
Sbjct: 516 MNLRAEAKSETSIGLSWSAPRQ---ESVIKYELLFREGDRGREV--------GRTFDPTT 564

Query: 441 GFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVI 500
            F  + L PNT Y   LAA+SP+G GA T  +  RT Q +P   P+DV+   L S+ +++
Sbjct: 565 AFVVEDLKPNTEYAFRLAARSPQGLGAFTAVVRQRTLQAKPSAPPQDVKCTSLRSTAILV 624

Query: 501 QWD--EPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT----ISDLTPHTIYTI 554
            W    PET NG + GY V Y   + L     + + V+N   TT    +  L   T Y +
Sbjct: 625 SWRPPPPETHNGALVGYSVRY---RPLGSEDPDPKEVNNIPPTTTQILLEALEKWTEYRV 681

Query: 555 RVQAFTSVGPGPLSAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAWSKPTHSGEN--II 611
              A+T VGPGP S+PV+V+T + VPS  PR + A  +  TA+ + W  PT   ++  I 
Sbjct: 682 TAVAYTEVGPGPESSPVVVRTDEDVPSAPPRKVEAEALNATAIRVLWRSPTPGRQHGQIR 741

Query: 612 SYELYW-----NDTYAKPR--DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK 664
            Y++++      +    PR  D+   D QE  +                           
Sbjct: 742 GYQVHYVRMEGAEARGPPRIKDIMLADAQEMVI--------------------------- 774

Query: 665 AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVS 724
                          T L P T Y I +AA + +G+GA + P  V TK  V G P  +V 
Sbjct: 775 ---------------TNLQPETAYSITVAAYTMKGDGARSKPKVVVTKGAVLGRPTLSVQ 819

Query: 725 CEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL 771
             P  S   R  WE PP + +   ++ Y+LQF   GR D+  + + L
Sbjct: 820 QTPEGSLLAR--WE-PPADAAEDPVLGYRLQF---GREDAAPATLEL 860

Interacts with LAR-interacting protein LIP.1.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|A2A8L5|PTPRF_MOUSE Receptor-type tyrosine-protein phosphatase F OS=Mus musculus GN=Ptprf PE=1 SV=1

 Score =  306 bits (783), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 274/947 (28%), Positives = 409/947 (43%), Gaps = 224/947 (23%)

Query: 100  VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
            VRRV P+FSIPP +  EVM    +NL+CVAVG+PMP+VKW  G   ELT +D++PVGRNV
Sbjct: 227  VRRVAPRFSIPPSSQ-EVMPGGSVNLTCVAVGAPMPYVKWMMGAE-ELTKEDEMPVGRNV 284

Query: 160  LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
            L L  V  S NYTC+A S LG+IE +  V V+        LP  P+D+ ++E TATSV L
Sbjct: 285  LELSNVMRSANYTCVAISSLGMIEATAQVTVKA-------LPKPPIDLVVTETTATSVTL 337

Query: 220  DW-TYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
             W +  +E + +Y IQY+    + P+ E+ G+ +T Y++  LSP++EY F ++AVN++GR
Sbjct: 338  TWDSGNTEPVSFYGIQYRAAGTDGPFQEVDGVASTRYSIGGLSPFSEYAFRVLAVNSIGR 397

Query: 279  GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------- 327
            GPPS      TGE  P + PR VQ R LS+STM++QW+ PE PNG +             
Sbjct: 398  GPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRR 457

Query: 328  ------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ-YGKTP 380
                  KH+   GL+ T  +  L P   Y + + A +  G+G  +P I V+T+Q     P
Sbjct: 458  PLSAWHKHNTDAGLLTT--VGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQP 515

Query: 381  GFGEQAAKHHRRIGL---------------------------------VETYSLTGLYPN 407
               +  A+   RI L                                   +Y+L  L P+
Sbjct: 516  ADFQANAESDTRIQLSWLLPPQERIVKYELVYWAAEDEGQQHKVTFDPTSSYTLEDLKPD 575

Query: 408  TLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGA 467
            TLY+  LAA+S  G G  TP +  RT Q                                
Sbjct: 576  TLYHFQLAARSDLGVGVFTPTVEARTAQ-------------------------------- 603

Query: 468  TTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSL 525
            +TP  P           P+ V      S+T+ + W  P  ++ NG IT Y V Y   +++
Sbjct: 604  STPSAP-----------PQKVTCVSTGSTTVRVSWVPPPADSRNGIITQYSVAY---EAV 649

Query: 526  PMSAWETQVVD----NNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581
                 +  VVD     +    +  L   T Y + V+A T VGPGP S+PVLV+T + VPS
Sbjct: 650  DGEDRKRHVVDGISREHSSWDLLGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPS 709

Query: 582  Q-PRDLRAVDIQETAVTLAWSKPTHSGEN--IISYEL-YWNDTYAKPR------DLRAVD 631
              PR +    +  TAV ++W  P  + ++  I  Y++ Y      +PR      D+   +
Sbjct: 710  GPPRKVEVEPLNSTAVHVSWKLPVPNKQHGQIRGYQVTYVRLENGEPRGQPIIQDVMLAE 769

Query: 632  IQETAVT----------------------------------------------------L 639
             QET ++                                                    L
Sbjct: 770  AQETTISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGRPTMMVSTTAMHTALL 829

Query: 640  AWSKPTHSGENIISYELYWNDT---------YAKAKHHRRIGLVETYSLTGLYPNTLYYI 690
             W  P      ++ Y L +            + K   H        +++TGL+    Y  
Sbjct: 830  QWHPPKELPGELLGYRLQYRRADEARPNTIDFGKDDQH--------FTVTGLHKGATYVF 881

Query: 691  WLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIV 750
             LAA++  G G       + T + VP   PQN+    L++++  ++W+PP +   NGHI 
Sbjct: 882  RLAAKNRAGPGEEFEK-EITTPEDVPSGFPQNLRVTGLTTSTTELTWDPPVLAERNGHIT 940

Query: 751  YYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIR 810
             Y + + +    +S+  +  + N T   L  LK  T Y I V A TS G GP S  I  R
Sbjct: 941  NYTVVYRDI---NSQLELQNVTNDTHLTLLGLKPDTTYDIKVRAHTSKGAGPLSPSIQSR 997

Query: 811  THEDDPSEVCPTQNDFRKNKKTNGS-------------NFKGGY----LNDPMRFDVSDG 853
            T         P +  F KN +   +             ++K       L +    +V DG
Sbjct: 998  T--------MPVEQVFAKNFRVAAAMKTSVLLSWEVPDSYKSAVPFKILYNGQSVEV-DG 1048

Query: 854  GALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
             ++   +  LQP+T Y+  +        G +        P  +P +P
Sbjct: 1049 HSMRKLIADLQPNTEYSFVLMNRGSSAGGLQHLVSIRTAPDLLPQKP 1095

The first PTPase domain has enzymatic activity, while the second one seems to affect the substrate specificity of the first one.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|A4IFW2|PTPRF_DANRE Receptor-type tyrosine-protein phosphatase F OS=Danio rerio GN=ptprf PE=2 SV=1

 Score =  293 bits (749), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 266/865 (30%), Positives = 384/865 (44%), Gaps = 177/865 (20%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           VRRVPP+FSIPP    EVM    +NL+CVAVG+PMP+VKW  G+ +ELT D+++PVGRNV
Sbjct: 228 VRRVPPRFSIPPTNH-EVMPGGSVNLTCVAVGAPMPYVKWMTGE-VELTKDEEMPVGRNV 285

Query: 160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
           L L  + +S NYTC+A S LG+IE +  V V+        LP  P  + ++E TATSV L
Sbjct: 286 LELTNIRQSTNYTCVAISSLGMIEATAQVSVKA-------LPKPPTSLTVTETTATSVTL 338

Query: 220 DWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
            W   + E + YY+IQY+ K ++T + E+ G+ TT Y++  LSPY+EYEF ++AVNN+GR
Sbjct: 339 TWDSGNPEPVSYYIIQYRAKTSDTNFQEVDGVATTRYSIGGLSPYSEYEFRVMAVNNIGR 398

Query: 279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------- 327
           GPPS P    TGE  P + P  VQ R LS+STM++QW+ PE PNGQI             
Sbjct: 399 GPPSEPVETRTGEQAPSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRIYYTSDLDA 458

Query: 328 ------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ-YGKTP 380
                 KH+     + T  ++ L     Y + +   +  G+G  +  + V+T+Q     P
Sbjct: 459 PLSAWQKHNTDDSRLTT--ISSLTTGITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQP 516

Query: 381 GFGEQAAKHHRRIGL--------------------------------VETYSLTGLYPNT 408
              E  A+   RI L                                  +Y++ GL P+T
Sbjct: 517 SSFEAEAELDTRILLTWLWPVQDPIIKYELQYWEADSDNKIHVTFDPAGSYAVEGLKPDT 576

Query: 409 LYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGAT 468
           LY   LAA+S  G+G  T PI  RT Q                                 
Sbjct: 577 LYKFSLAARSEMGQGVFTHPIEARTAQSA------------------------------- 605

Query: 469 TPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLP 526
                       P   P+DV +  LSS+++ + W  P   + +G I  Y V Y       
Sbjct: 606 ------------PSAPPQDVHLLSLSSTSIKVSWVAPPAASRHGAIVRYTVSYQAVNGED 653

Query: 527 MSAWETQVVDNNQLTTISD-LTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ-PR 584
               E   +  +  + + + L   T Y + V+A T VGPGP S  V ++T + VP   PR
Sbjct: 654 TERHEVPDIGADASSCVLEGLEKWTEYQVWVRAHTDVGPGPESTAVRIRTNEDVPGAPPR 713

Query: 585 DLRAVDIQETAVTLAWSKPTHSGE---NIISYE-LYWNDTYAKPRDLRAVDIQETAVTLA 640
            L    +  TA+ + W KP  SG+    I  Y+ +Y      +PR     +I + A+  A
Sbjct: 714 KLEVEALNSTAIRVTW-KPPLSGKQHGQIRGYQVIYSRLENGEPRG--HPNIMDVALPEA 770

Query: 641 WSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 700
             K   S E    YE                       + GL   T Y + +AA + +G+
Sbjct: 771 QWKIEESTE----YEAV---------------------IAGLASETSYSVTVAAYTTKGD 805

Query: 701 GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG 760
           GA +    V T   VPG P   +S   + +T++ I W+PP  +   G ++ Y+L++    
Sbjct: 806 GARSKAKVVTTTGAVPGKPTMIIST-TVGNTAL-IQWQPP--KDMVGELMGYRLRYKRLE 861

Query: 761 RSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVC 820
             + E    +  +    V D L K   Y   + A    G G   Y   I T ED PS   
Sbjct: 862 EENYEIREFSRTDDHHTVTD-LHKGATYSFHLSARNRAGLG-EEYVKDIGTPEDVPS--- 916

Query: 821 PTQNDFRKNKKTNGSNFKGGYLN-DPMRFDVSDGGAL----------------------E 857
                F  N +  G       L  +P      +G  +                      +
Sbjct: 917 ----GFPLNLQVVGLTTSTTRLTWEPPALSERNGRIIHYIVVYRDINSKQNSTNRTSDTQ 972

Query: 858 LNVTGLQPDTIYTIQVAALTRKGDG 882
           + + GL+PDT Y I+V A T KG G
Sbjct: 973 MTIQGLRPDTTYDIRVQAFTSKGGG 997

The first PTPase domain has enzymatic activity, while the second one seems to affect the substrate specificity of the first one.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	904
189235110	2016	PREDICTED: similar to receptor tyrosine	0.457	0.205	0.602	1e-156
270004034	2156	hypothetical protein TcasGA2_TC003342 [T	0.457	0.192	0.590	1e-153
357604037	2049	putative receptor tyrosine phosphatase t	0.460	0.203	0.593	1e-153
307166143	1810	Tyrosine-protein phosphatase Lar [Campon	0.462	0.230	0.595	1e-151
332020571	1785	Tyrosine-protein phosphatase Lar [Acromy	0.460	0.233	0.597	1e-150
350427923	2025	PREDICTED: tyrosine-protein phosphatase	0.461	0.205	0.590	1e-150
328786146	2029	PREDICTED: tyrosine-protein phosphatase	0.421	0.187	0.622	1e-148
383854788	2040	PREDICTED: tyrosine-protein phosphatase	0.461	0.204	0.584	1e-148
242003488	2014	Receptor-type tyrosine-protein phosphata	0.462	0.207	0.586	1e-146
157109352	2007	receptor tyrosine phosphatase type r2a [	0.460	0.207	0.570	1e-143

>gi|189235110|ref|XP_971078.2| PREDICTED: similar to receptor tyrosine phosphatase type r2a [Tribolium castaneum]

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 294/488 (60%), Positives = 343/488 (70%), Gaps = 74/488 (15%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE 504
           ++L P T Y +++ A +  G G  + P  V T + EPG++PR+VQVRPLSSSTMVIQWDE
Sbjct: 364 RSLSPYTEYEMYVIAVNNIGRGPPSAPEFVTTGETEPGSSPRNVQVRPLSSSTMVIQWDE 423

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGP 564
           PET NGQ+TGYKVYYT +  LPM+ WE+QVVDNNQLTTIS+LTPHTIYTIRVQAFTSVGP
Sbjct: 424 PETANGQVTGYKVYYTTNSQLPMAQWESQVVDNNQLTTISELTPHTIYTIRVQAFTSVGP 483

Query: 565 GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP 624
           GPLSAPV VKTQQGVPSQP +                                       
Sbjct: 484 GPLSAPVHVKTQQGVPSQPSN--------------------------------------- 504

Query: 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYP 684
             L A DI ET+VTL WSKPTHSGENI++YELYWNDTYAK KHHRRI + E+Y+LTGLYP
Sbjct: 505 --LMASDIGETSVTLQWSKPTHSGENIVNYELYWNDTYAKEKHHRRIPITESYTLTGLYP 562

Query: 685 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER 744
           NTLYY+WLAA+S RGEGATTPPIPVRTKQYVPGAPP NV+ E +S T+IR++WEPP   R
Sbjct: 563 NTLYYVWLAARSQRGEGATTPPIPVRTKQYVPGAPPSNVTGEAVSPTAIRVTWEPPLANR 622

Query: 745 SNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSS 804
           S+G+I+YYKLQ+VE  RSDSEA  V + N TSFVLDELK+WT YRIWVLAGTS+GDGPSS
Sbjct: 623 SHGNIIYYKLQYVEADRSDSEAIEVKM-NATSFVLDELKRWTTYRIWVLAGTSVGDGPSS 681

Query: 805 YPITIRTHEDDPS-----EVCPTQNDFRK-----------------------NKKTNGSN 836
           +PIT+RTHED P      +V P  +   K                         K  G N
Sbjct: 682 FPITVRTHEDVPGNPEDVKVTPINSTTIKVEWKPPHPKERNGIILGYHVHVQETKEEGKN 741

Query: 837 FKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGV 896
           F    LNDPM+FDV     L+LNV+GLQPDT Y +QVAALTRKGDGDRS P  ++TPGGV
Sbjct: 742 F----LNDPMKFDVFGDAVLDLNVSGLQPDTTYAVQVAALTRKGDGDRSPPVNVRTPGGV 797

Query: 897 PNRPHVNL 904
           PNRP + +
Sbjct: 798 PNRPALTI 805

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270004034|gb|EFA00482.1| hypothetical protein TcasGA2_TC003342 [Tribolium castaneum]

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 293/496 (59%), Positives = 343/496 (69%), Gaps = 82/496 (16%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ--------YEPGTAPRDVQVRPLSSS 496
           ++L P T Y +++ A +  G G  + P  V T +         +PG++PR+VQVRPLSSS
Sbjct: 496 RSLSPYTEYEMYVIAVNNIGRGPPSAPEFVTTGETAETSFGGAKPGSSPRNVQVRPLSSS 555

Query: 497 TMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRV 556
           TMVIQWDEPET NGQ+TGYKVYYT +  LPM+ WE+QVVDNNQLTTIS+LTPHTIYTIRV
Sbjct: 556 TMVIQWDEPETANGQVTGYKVYYTTNSQLPMAQWESQVVDNNQLTTISELTPHTIYTIRV 615

Query: 557 QAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY 616
           QAFTSVGPGPLSAPV VKTQQGVPSQP +                               
Sbjct: 616 QAFTSVGPGPLSAPVHVKTQQGVPSQPSN------------------------------- 644

Query: 617 WNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET 676
                     L A DI ET+VTL WSKPTHSGENI++YELYWNDTYAK KHHRRI + E+
Sbjct: 645 ----------LMASDIGETSVTLQWSKPTHSGENIVNYELYWNDTYAKEKHHRRIPITES 694

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRIS 736
           Y+LTGLYPNTLYY+WLAA+S RGEGATTPPIPVRTKQYVPGAPP NV+ E +S T+IR++
Sbjct: 695 YTLTGLYPNTLYYVWLAARSQRGEGATTPPIPVRTKQYVPGAPPSNVTGEAVSPTAIRVT 754

Query: 737 WEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGT 796
           WEPP   RS+G+I+YYKLQ+VE  RSDSEA  V + N TSFVLDELK+WT YRIWVLAGT
Sbjct: 755 WEPPLANRSHGNIIYYKLQYVEADRSDSEAIEVKM-NATSFVLDELKRWTTYRIWVLAGT 813

Query: 797 SIGDGPSSYPITIRTHEDDPS-----EVCPTQNDFRK----------------------- 828
           S+GDGPSS+PIT+RTHED P      +V P  +   K                       
Sbjct: 814 SVGDGPSSFPITVRTHEDVPGNPEDVKVTPINSTTIKVEWKPPHPKERNGIILGYHVHVQ 873

Query: 829 NKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPE 888
             K  G NF    LNDPM+FDV     L+LNV+GLQPDT Y +QVAALTRKGDGDRS P 
Sbjct: 874 ETKEEGKNF----LNDPMKFDVFGDAVLDLNVSGLQPDTTYAVQVAALTRKGDGDRSPPV 929

Query: 889 TIKTPGGVPNRPHVNL 904
            ++TPGGVPNRP + +
Sbjct: 930 NVRTPGGVPNRPALTI 945

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357604037|gb|EHJ64021.1| putative receptor tyrosine phosphatase type r2a [Danaus plexippus]

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 286/482 (59%), Positives = 340/482 (70%), Gaps = 66/482 (13%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           L P T Y +++ A +  G G  + P  + T + EPG+APR+VQVRPLSSSTMVIQWDEPE
Sbjct: 450 LSPYTEYEMYVIAVNNIGRGPPSTPAVITTGETEPGSAPRNVQVRPLSSSTMVIQWDEPE 509

Query: 507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGP 566
           TPNGQ+TGYK+YYT D S  + +W +Q+VDNN LTTIS+LTPHT+YTIRVQAFTSVGPGP
Sbjct: 510 TPNGQVTGYKIYYTSDSSQSLQSWHSQMVDNNHLTTISELTPHTVYTIRVQAFTSVGPGP 569

Query: 567 LSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRD 626
           +SAPV VKTQQGVPSQP +                                         
Sbjct: 570 ISAPVQVKTQQGVPSQPSN----------------------------------------- 588

Query: 627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNT 686
           L AV+  ET+VTL+W +P H+G+NI+SYELYWNDTYAK  H +RI + ETY+LTGLYPNT
Sbjct: 589 LVAVEAGETSVTLSWKRPAHAGDNIVSYELYWNDTYAKQHHRKRIPITETYTLTGLYPNT 648

Query: 687 LYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSN 746
           LYYIWLAA+S RGEGATTP I VRTKQYVPGAPP NV+   +S T++R+SW+PPP ER+N
Sbjct: 649 LYYIWLAARSQRGEGATTPAIGVRTKQYVPGAPPMNVTATAVSPTAVRVSWQPPPAERAN 708

Query: 747 GHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP 806
           G I YYKL  VE+GR DSEA++V L NQTSFVLDEL++WTEYRIWV+AGTS+GDGP SYP
Sbjct: 709 GRIAYYKLLCVESGRGDSEATVVRL-NQTSFVLDELRRWTEYRIWVMAGTSVGDGPPSYP 767

Query: 807 ITIRTHED---DPSEVCPTQ-------------NDFRKNKKTNGSNFK--------GGYL 842
           +TIRTHED   +P EV  T               +  KN    G +           G L
Sbjct: 768 VTIRTHEDVPGEPQEVKVTAINSTSIHVTWKPPQEKEKNGIIRGYHVHVQELREEGKGLL 827

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPHV 902
           NDPMRF+V D   LELN++GLQPDT Y++QVAALTRKGDGDRS P T+KTPGGVPNRP V
Sbjct: 828 NDPMRFNVMDDTTLELNISGLQPDTRYSVQVAALTRKGDGDRSPPVTVKTPGGVPNRPTV 887

Query: 903 NL 904
           NL
Sbjct: 888 NL 889

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307166143|gb|EFN60392.1| Tyrosine-protein phosphatase Lar [Camponotus floridanus]

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 288/484 (59%), Positives = 341/484 (70%), Gaps = 66/484 (13%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE 504
           ++L P T Y +++ A +  G G  + P+ V T + +PGTAPR VQVRPLSSSTMVIQWDE
Sbjct: 157 RSLSPYTEYELYVIAVNSIGRGPPSAPVIVTTGETKPGTAPRKVQVRPLSSSTMVIQWDE 216

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGP 564
           PETPNGQ+TGYKVYYT D + PM++W+ Q+VDN+QLTTIS+LTPHTIYTIRVQA TSVGP
Sbjct: 217 PETPNGQVTGYKVYYTTDSNQPMASWQYQMVDNSQLTTISELTPHTIYTIRVQALTSVGP 276

Query: 565 GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP 624
           GPLS PV +KTQQGVPSQP                              E+         
Sbjct: 277 GPLSLPVQIKTQQGVPSQP------------------------------EM--------- 297

Query: 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYP 684
             L AV+I ET V L WSKP HS ENI+SYELYWNDTYAK KHHRRI + E Y+LTGLYP
Sbjct: 298 --LTAVEIGETTVMLQWSKPAHSAENILSYELYWNDTYAKEKHHRRIPVTENYTLTGLYP 355

Query: 685 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER 744
           NTLYY+WLAA+S RGEGATT P PVRTKQYVPGAPP+NV+ + +S TSI ++WEPP  ER
Sbjct: 356 NTLYYVWLAARSQRGEGATTIPYPVRTKQYVPGAPPRNVTGKAISPTSILVTWEPPAAER 415

Query: 745 SNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSS 804
           SNG I YY+LQ VE+GRSDSEA  + L N T FVLDELKKWTEYRIWVLAGT +GDGP S
Sbjct: 416 SNGRIAYYRLQVVESGRSDSEARNIKL-NDTRFVLDELKKWTEYRIWVLAGTRVGDGPPS 474

Query: 805 YPITIRTHED---DPSEVCPT-------QNDFRKNKKTNGSNFKGGY------------- 841
           YPI +RTHED   DP +V  T         +++  K T+ +    GY             
Sbjct: 475 YPILVRTHEDVPGDPQDVKVTPINSTAIHVEWKPPKATDQNGVIRGYHIHVQEVREEGKD 534

Query: 842 -LNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
            LN+P+R DV + G LE+N+TGLQPDT Y++QVAALTRKGDGDRS P  ++TPGGVPNRP
Sbjct: 535 LLNEPIRRDVHEDGVLEVNITGLQPDTRYSVQVAALTRKGDGDRSVPIHVRTPGGVPNRP 594

Query: 901 HVNL 904
            VN+
Sbjct: 595 QVNV 598

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020571|gb|EGI60979.1| Tyrosine-protein phosphatase Lar [Acromyrmex echinatior]

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/485 (59%), Positives = 343/485 (70%), Gaps = 69/485 (14%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE 504
           ++L P T Y +++ A +  G G  + P+ V T + +PGTAPR VQVRPLSSSTMVIQWDE
Sbjct: 135 RSLSPYTEYELYVIAVNSIGRGPPSAPVIVTTGETKPGTAPRKVQVRPLSSSTMVIQWDE 194

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGP 564
           PETPNGQ+TGYKVYYT D + PM++W+ Q+VDN+QLTTIS+LTPHTIYTIRVQA TSVGP
Sbjct: 195 PETPNGQVTGYKVYYTTDSNQPMASWQYQMVDNSQLTTISELTPHTIYTIRVQALTSVGP 254

Query: 565 GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP 624
           GPLS PV +KTQQGVPSQP  L A                                    
Sbjct: 255 GPLSLPVQIKTQQGVPSQPEMLTA------------------------------------ 278

Query: 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYP 684
                VDI ET VTL WSKP HS ENI+SYELYWNDTYAK +HHRRI + E Y+LTGLYP
Sbjct: 279 -----VDIGETKVTLQWSKPAHSAENILSYELYWNDTYAKERHHRRIPVTENYTLTGLYP 333

Query: 685 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER 744
           NTLYY+WLAA+S RGEGATT P PVRTKQYVPGAPP+NV+ + +S TSI +SWEPP  ER
Sbjct: 334 NTLYYVWLAARSQRGEGATTIPYPVRTKQYVPGAPPRNVTGKAISPTSILVSWEPPAAER 393

Query: 745 SNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSS 804
           SNG I YY+LQ VE+GRSDSEA  + L N T FVLDELKKWTEYRIWVLAGT +GDGP S
Sbjct: 394 SNGRITYYRLQVVESGRSDSEARNIKL-NDTRFVLDELKKWTEYRIWVLAGTRVGDGPPS 452

Query: 805 YPITIRTHED---DPSEVCPT-------QNDFR--KNKKTNGSNFKGGY----------- 841
           YPI++RTHED   DP +V  T         +++  K K+ NG   +G +           
Sbjct: 453 YPISVRTHEDVPGDPQDVKVTPINSTTIHVEWKPPKTKEQNGV-IRGYHIHVQEVREEGK 511

Query: 842 --LNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNR 899
             LN+P+R DV + G LE+N+TGLQPDT Y++QVAALTRKGDGDRS P  ++TPGGVPNR
Sbjct: 512 DLLNEPIRRDVHE-GVLEVNITGLQPDTRYSVQVAALTRKGDGDRSVPIHVRTPGGVPNR 570

Query: 900 PHVNL 904
           P VN+
Sbjct: 571 PQVNV 575

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350427923|ref|XP_003494927.1| PREDICTED: tyrosine-protein phosphatase Lar-like, partial [Bombus impatiens]

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 291/493 (59%), Positives = 343/493 (69%), Gaps = 76/493 (15%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY--------EPGTAPRDVQVRPLSSS 496
           ++L P T Y + + A +  G G  + P+ V T +         +PGTAPR V  RPLSSS
Sbjct: 367 RSLSPYTEYELTVTAVNAIGRGPASAPVTVTTGETTESTNGGTKPGTAPRKVVARPLSSS 426

Query: 497 TMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRV 556
           TMVIQWDEPETPNGQ+TGYKVYYT D +  M++W+ Q+VDN+QLTTISDLTPHTIY IRV
Sbjct: 427 TMVIQWDEPETPNGQVTGYKVYYTTDPNQQMASWQYQLVDNSQLTTISDLTPHTIYMIRV 486

Query: 557 QAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY 616
           QA TSVGPGPLS PV +KTQQGVPSQP  L A                            
Sbjct: 487 QALTSVGPGPLSTPVQIKTQQGVPSQPEMLTA---------------------------- 518

Query: 617 WNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET 676
                        VDI ET VTL W+KPTHS ENI+SYELYWNDTYA+ KHHRRI + E 
Sbjct: 519 -------------VDIGETKVTLQWNKPTHSAENILSYELYWNDTYAQEKHHRRIPVTEN 565

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRIS 736
           Y+LTGLYPNTLYY+WLAA+S RGEGATT P PVRTKQYVPGAPP+NVS + +S TSI ++
Sbjct: 566 YTLTGLYPNTLYYVWLAARSQRGEGATTIPYPVRTKQYVPGAPPRNVSGQAISPTSILVT 625

Query: 737 WEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGT 796
           WEPPP +RSNG I YYKLQ VE+GRSDSEA ++ L N T FVLDELKKWTEYRIWVLAGT
Sbjct: 626 WEPPPADRSNGRIAYYKLQVVESGRSDSEAKVIKL-NDTRFVLDELKKWTEYRIWVLAGT 684

Query: 797 SIGDGPSSYPITIRTHEDDPSE-----VCPTQN-----DFR--KNKKTNGSNFKGGY--- 841
           S+GDGP SYPI++RTHED P       V P  +      +R   +K+ NG   +G +   
Sbjct: 685 SVGDGPPSYPISVRTHEDVPGHPQNVTVTPINSTTIHVKWRPPTSKEQNGV-IRGYHIHV 743

Query: 842 ----------LNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIK 891
                     LN+P+R DV + G LE+N+TGLQPDT Y++QVAALTRKGDGDRS PET++
Sbjct: 744 QEMREEGKDLLNEPIRRDVQEDGVLEVNITGLQPDTTYSVQVAALTRKGDGDRSPPETVR 803

Query: 892 TPGGVPNRPHVNL 904
           TPGGVPNRPHVN+
Sbjct: 804 TPGGVPNRPHVNV 816

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786146|ref|XP_397010.3| PREDICTED: tyrosine-protein phosphatase Lar [Apis mellifera]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 280/450 (62%), Positives = 326/450 (72%), Gaps = 69/450 (15%)

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           +PGTAPR VQ RPLSSSTMVIQW EPETPNGQ+TGYK+YYT D + PM++W+ Q+VDNNQ
Sbjct: 414 KPGTAPRKVQARPLSSSTMVIQWVEPETPNGQVTGYKIYYTTDPNQPMASWKYQMVDNNQ 473

Query: 540 LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLA 599
           LTTISDL  HTIYTIRVQA TSVGPGPLS PV +KTQQGVPSQP  L A           
Sbjct: 474 LTTISDLDTHTIYTIRVQALTSVGPGPLSTPVQIKTQQGVPSQPEMLTA----------- 522

Query: 600 WSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 659
                                         +DI ET VTL W+KP HS ENI+SYELYWN
Sbjct: 523 ------------------------------IDIGETTVTLQWNKPIHSAENILSYELYWN 552

Query: 660 DTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
           DTYA+ KHHRRI + E Y+LTGLYPNTLYY+WLAA+S RGEGATT P PVRTKQYVPGAP
Sbjct: 553 DTYAQEKHHRRIPVTENYTLTGLYPNTLYYVWLAARSQRGEGATTIPYPVRTKQYVPGAP 612

Query: 720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVL 779
           P+NVS E +S TSIR++WEPPP +RSNG I YYKLQ VE+GRSDSEA ++ L N T FVL
Sbjct: 613 PRNVSGEAVSPTSIRVTWEPPPADRSNGRIAYYKLQVVESGRSDSEAKVIKL-NDTQFVL 671

Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED---DPSEVCPT-------QNDFR-- 827
           DELKKWTEYRIWVLAGTS+GDGP SYPI++RTHED   DP +V  T         +++  
Sbjct: 672 DELKKWTEYRIWVLAGTSVGDGPPSYPISVRTHEDVPGDPQDVKVTPINSTAIHVEWKPP 731

Query: 828 KNKKTNGSNFKGGY-------------LNDPMRFDVSDGGALELNVTGLQPDTIYTIQVA 874
           K+K+ NG   +G +             LN+P+R DV + G LE+N+TGLQPDT Y++QVA
Sbjct: 732 KSKEQNGV-IRGYHIHVQEVREEGKDLLNEPIRRDVHE-GVLEVNITGLQPDTRYSVQVA 789

Query: 875 ALTRKGDGDRSKPETIKTPGGVPNRPHVNL 904
           ALTRKGDGDRS P  ++TPGGVPNRPHVN+
Sbjct: 790 ALTRKGDGDRSPPVHVRTPGGVPNRPHVNV 819

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854788|ref|XP_003702902.1| PREDICTED: tyrosine-protein phosphatase Lar-like [Megachile rotundata]

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 288/493 (58%), Positives = 341/493 (69%), Gaps = 76/493 (15%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY--------EPGTAPRDVQVRPLSSS 496
           ++L P T Y  ++ A +  G G  + P+ V T +         +PGTAPR VQ RPLSSS
Sbjct: 381 RSLSPYTEYEFYVIAVNAIGRGPPSAPVTVTTGETTESTNGGAKPGTAPRKVQARPLSSS 440

Query: 497 TMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRV 556
           TMVIQWDEPETPNGQ+TGYKVYYT D S  M++W+ Q+VDN+QLTTISDLTPHTIYTIRV
Sbjct: 441 TMVIQWDEPETPNGQVTGYKVYYTIDPSQQMASWQYQMVDNSQLTTISDLTPHTIYTIRV 500

Query: 557 QAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY 616
           QA TSVGPGPLS PV +KTQQGVPSQP  L A                            
Sbjct: 501 QALTSVGPGPLSLPVQIKTQQGVPSQPEMLTA---------------------------- 532

Query: 617 WNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET 676
                        VDI ET VTL WSKP HS ENI++YELYWNDTYA+ KHHR+I + E 
Sbjct: 533 -------------VDIGETKVTLQWSKPAHSAENILNYELYWNDTYAQEKHHRKIPVTEN 579

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRIS 736
           Y+LT LYPNTLYY+WLAA++ RGEGATT P PVRTKQYVPGAPP+NVS + +S TSI ++
Sbjct: 580 YTLTNLYPNTLYYVWLAAKNQRGEGATTIPYPVRTKQYVPGAPPRNVSGQAISPTSILVT 639

Query: 737 WEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGT 796
           WEPPP +RSNG I YYKLQ VE+GRSDSEA I+ L N T FVLDELKKWTEYRIWV AGT
Sbjct: 640 WEPPPADRSNGRIAYYKLQVVESGRSDSEAKIIKL-NDTRFVLDELKKWTEYRIWVSAGT 698

Query: 797 SIGDGPSSYPITIRTHED---DPSEV-------CPTQNDFR--KNKKTNGSNFKGGY--- 841
           S+GDGP SYPI++RTHED   DP +V            +++  K+K+ NG   +G +   
Sbjct: 699 SVGDGPPSYPISVRTHEDVPGDPQDVKARPINSTAIHVEWKPPKSKEQNGV-IRGYHIHV 757

Query: 842 ----------LNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIK 891
                     LN+P+R DV D G LE+N+TGLQPDT Y++QVAALTRKGDGDRS P  ++
Sbjct: 758 QEVREEGKDLLNEPIRRDVHDDGVLEMNITGLQPDTRYSVQVAALTRKGDGDRSTPVHVR 817

Query: 892 TPGGVPNRPHVNL 904
           TPGGVPNRP VN+
Sbjct: 818 TPGGVPNRPQVNV 830

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003488|ref|XP_002422752.1| Receptor-type tyrosine-protein phosphatase F precursor, putative [Pediculus humanus corporis] gi|212505585|gb|EEB10014.1| Receptor-type tyrosine-protein phosphatase F precursor, putative [Pediculus humanus corporis]

 Score =  527 bits (1358), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/486 (58%), Positives = 328/486 (67%), Gaps = 68/486 (13%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE 504
           ++L P T Y + + A +  G G  +  + V T + EPGTAPR+VQVRPLSSSTMVIQWDE
Sbjct: 363 RSLSPYTEYEMSVIAVNNIGRGPPSQSVVVTTGETEPGTAPRNVQVRPLSSSTMVIQWDE 422

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGP 564
           PET NGQ+TGYKVYYT +  LP+++WE+Q+VD N LTTIS LTPHTIYTIRVQAFTSVGP
Sbjct: 423 PETANGQVTGYKVYYTTNPQLPIASWESQMVDVNHLTTISGLTPHTIYTIRVQAFTSVGP 482

Query: 565 GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP 624
           GPLS P LVKTQQGVPSQP +L                                      
Sbjct: 483 GPLSTPALVKTQQGVPSQPVNL-------------------------------------- 504

Query: 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYP 684
              R  D  ET+ TL W KP HS E I+SYELYWNDTYA  KHH  I   E+Y+L  LYP
Sbjct: 505 ---RVTDFDETSATLQWGKPVHSSETIVSYELYWNDTYANEKHHTPIPASESYTLNDLYP 561

Query: 685 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER 744
           NTLYY+WLAA++ RGEGATTPPIP RTKQYVPGAPPQN+S E    TSIR+SW PP  ER
Sbjct: 562 NTLYYVWLAARNQRGEGATTPPIPFRTKQYVPGAPPQNISGEADGPTSIRVSWSPP-AER 620

Query: 745 SNGHIVYYKLQFVETGRSDSEASIVTLKN--QTSFVLDELKKWTEYRIWVLAGTSIGDGP 802
           SNG IVYYKLQFVE  RSDSEA++VT+ N   TSF L+ELK+WTEY+IWVLAGTS+GDGP
Sbjct: 621 SNGRIVYYKLQFVEKDRSDSEAAVVTIVNVTSTSFTLEELKRWTEYKIWVLAGTSVGDGP 680

Query: 803 SSYPITIRTHEDDPSE-----VCPTQN-----------DFRKNKKTNGSNFK-------- 838
           SS PI +RTHED P E     V P  +           D  +N    G +          
Sbjct: 681 SSDPIYVRTHEDVPGEPRDVKVFPINSTSIQVMWKPPADRERNGVIRGYHVHVQETRDES 740

Query: 839 GGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPN 898
              +N+P+  DVSDG  LELNVTGLQPDT Y +QVAALTRKGDG+RS P +IKTPGGVPN
Sbjct: 741 KNLVNEPLTIDVSDGNVLELNVTGLQPDTKYNVQVAALTRKGDGNRSPPVSIKTPGGVPN 800

Query: 899 RPHVNL 904
           RP VNL
Sbjct: 801 RPTVNL 806

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157109352|ref|XP_001650632.1| receptor tyrosine phosphatase type r2a [Aedes aegypti] gi|108879038|gb|EAT43263.1| AAEL005284-PA [Aedes aegypti]

 Score =  517 bits (1332), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 276/484 (57%), Positives = 330/484 (68%), Gaps = 68/484 (14%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE 504
           + L P T Y  ++ A +  G G  + P    T + E  +APR++QVRPLSSSTMVI W+ 
Sbjct: 359 RTLSPYTEYEFYVIAVNNIGRGPPSSPATCTTGETEMESAPRNIQVRPLSSSTMVITWEP 418

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGP 564
           PETPNGQ+TGYKVYYT + S   ++WE+Q+VDN++LTTIS+LTPH IYTIRVQAFTS+G 
Sbjct: 419 PETPNGQVTGYKVYYTTNPSQQEASWESQMVDNSELTTISELTPHAIYTIRVQAFTSMGA 478

Query: 565 GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP 624
           GP+S PV VKTQQGVPSQP +                                       
Sbjct: 479 GPMSNPVQVKTQQGVPSQPSNF-------------------------------------- 500

Query: 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYP 684
              RA DI ETAVTL WS+PTHSGENI+ YELYWNDTYA  +HH+RI   ETY+L+ LYP
Sbjct: 501 ---RATDIGETAVTLQWSRPTHSGENIVHYELYWNDTYANEQHHQRIPNTETYTLSSLYP 557

Query: 685 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER 744
           +TLYY WLAA+S RGEGATTPPIPVRTKQYVPGAPP+N++ E  S T+I +SW PPPVER
Sbjct: 558 DTLYYFWLAARSQRGEGATTPPIPVRTKQYVPGAPPRNITVEATSPTTINVSWLPPPVER 617

Query: 745 SNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSS 804
           SNG IVYYK+ FVE GRSD +A++ TL N TS VLDELK+WT+Y+IWVLAGTS+GDGP S
Sbjct: 618 SNGAIVYYKVFFVEDGRSDGDATVTTL-NSTSIVLDELKRWTDYKIWVLAGTSVGDGPRS 676

Query: 805 YPITIRTHEDDPSE-----VCPTQNDFRK------NKKTNGSNFKG-------------G 840
           YP+T+RTHED P E       P  +   K       +K      +G             G
Sbjct: 677 YPVTVRTHEDVPGEPQDVLAVPVNSTTIKVTWKPPKEKNRNGIIRGYHIHVQEMRDEGRG 736

Query: 841 YLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
            LN+PM+FDV D  A+E NVT LQPDT Y++QVAALTRKGDGDRS P T+KTPGGVP RP
Sbjct: 737 LLNEPMKFDVVD--AMEYNVTALQPDTKYSVQVAALTRKGDGDRSTPITVKTPGGVPVRP 794

Query: 901 HVNL 904
            VNL
Sbjct: 795 TVNL 798

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	904
FB|FBgn0000464	2029	Lar "Leukocyte-antigen-related	0.549	0.244	0.465	1.3e-131
UNIPROTKB|F1N897	1767	PTPRF "Uncharacterized protein	0.547	0.280	0.376	6.4e-96
UNIPROTKB|F1SMP3	1342	PTPRD "Uncharacterized protein	0.637	0.429	0.354	5.1e-95
UNIPROTKB|F1MJR2	1776	PTPRD "Uncharacterized protein	0.543	0.276	0.381	1.6e-93
UNIPROTKB|F1PH17	1890	PTPRD "Uncharacterized protein	0.543	0.259	0.383	2.1e-93
UNIPROTKB|A7MBJ4	1898	PTPRF "Receptor-type tyrosine-	0.578	0.275	0.372	2.5e-93
UNIPROTKB|P23468	1912	PTPRD "Receptor-type tyrosine-	0.643	0.304	0.351	3.5e-93
UNIPROTKB|G3XAE2	1899	PTPRD "Receptor-type tyrosine-	0.637	0.303	0.352	9.2e-93
UNIPROTKB|F1NQ48	1918	F1NQ48 "Uncharacterized protei	0.662	0.312	0.355	1.4e-92
UNIPROTKB|F1M2Y2	1692	Ptprd "Protein Ptprd" [Rattus	0.543	0.290	0.384	1.4e-92

FB|FBgn0000464 Lar "Leukocyte-antigen-related-like" [Drosophila melanogaster (taxid:7227)]

 Score = 1106 (394.4 bits), Expect = 1.3e-131, Sum P(2) = 1.3e-131
 Identities = 251/539 (46%), Positives = 329/539 (61%)

Query:   100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
             VRRVPP FS PP  + EVML S LNLSC+AVGSPMP VKW KG   +LTP++++P+GRNV
Sbjct:   229 VRRVPPTFSRPPETISEVMLGSNLNLSCIAVGSPMPHVKWMKGSE-DLTPENEMPIGRNV 287

Query:   160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
             L L  + ES NYTCIAAS LG I++ ++VKVQ       +LP AP DV+ISEVTATSVRL
Sbjct:   288 LQLINIQESANYTCIAASTLGQIDSVSVVKVQ-------SLPTAPTDVQISEVTATSVRL 340

Query:   220 DWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
             +W+Y   E L YYVIQYKPK AN  +SEISGIIT YY VR LSPYTEYEFY+IAVNN+GR
Sbjct:   341 EWSYKGPEDLQYYVIQYKPKNANQAFSEISGIITMYYVVRALSPYTEYEFYVIAVNNIGR 400

Query:   279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA-KHHRRIG--- 334
             GPPS+PA  TTGET+  +APR+VQVR LSSSTMVI W+ PETPNGQ+T  K +       
Sbjct:   401 GPPSAPATCTTGETKMESAPRNVQVRTLSSSTMVITWEPPETPNGQVTGYKVYYTTNSNQ 460

Query:   335 --------LVETYSLTG---LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFG 383
                     +V+   LT    L P+ +Y + + A +  G G  + P+ V+ +Q   +    
Sbjct:   461 PEASWNSQMVDNSELTTVSELTPHAIYTVRVQAYTSMGAGPMSTPVQVKAQQGVPSQPSN 520

Query:   384 EQAAKHHRRIGLVETYSLTGLYPNTLYY--IWLAAQSPRGEGATTPPIPVRTKQYGKTPG 441
              +A         ++    T    N ++Y   W    + +             K+   +  
Sbjct:   521 FRATDIGETAVTLQWTKPTHSSENIVHYELYWNDTYANQAHH----------KRISNSEA 570

Query:   442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQ 501
             +    LYP+TLYYIWLAA+S RGEGATTPPIPVRTKQY PG  PR++     SS+T+ + 
Sbjct:   571 YTLDGLYPDTLYYIWLAARSQRGEGATTPPIPVRTKQYVPGAPPRNITAIATSSTTISLS 630

Query:   502 WDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF 559
             W  P  E  NG+I  YKV++ +       A  T +  N     + +L   T Y I V A 
Sbjct:   631 WLPPPVERSNGRIIYYKVFFVEVGREDDEA--TTMTLNMTSIVLDELKRWTEYKIWVLAG 688

Query:   560 TSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGEN-II-SYELY 616
             TSVG GP S P++++TQ+ VP  P+D++A  +  T++ ++W  P     N II  Y ++
Sbjct:   689 TSVGDGPRSHPIILRTQEDVPGDPQDVKATPLNSTSIHVSWKPPLEKDRNGIIRGYHIH 747

GO:0006470 "protein dephosphorylation" evidence=NAS;IDA

GO:0005001 "transmembrane receptor protein tyrosine phosphatase activity" evidence=ISS

GO:0004725 "protein tyrosine phosphatase activity" evidence=NAS;IDA

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0007411 "axon guidance" evidence=IMP;TAS

GO:0008045 "motor neuron axon guidance" evidence=IGI;NAS;IMP;TAS

GO:0016021 "integral to membrane" evidence=NAS

GO:0001700 "embryonic development via the syncytial blastoderm" evidence=NAS

GO:0048477 "oogenesis" evidence=IMP

GO:0007399 "nervous system development" evidence=IMP

GO:0007155 "cell adhesion" evidence=IMP

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0045467 "R7 cell development" evidence=IMP

GO:0008594 "photoreceptor cell morphogenesis" evidence=IMP

GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0030424 "axon" evidence=IDA

GO:0048841 "regulation of axon extension involved in axon guidance" evidence=IMP

GO:0048675 "axon extension" evidence=IMP

GO:0051124 "synaptic growth at neuromuscular junction" evidence=IMP

GO:0007412 "axon target recognition" evidence=IMP

GO:0032093 "SAM domain binding" evidence=IPI

GO:0005925 "focal adhesion" evidence=IDA

UNIPROTKB|F1N897 PTPRF "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 804 (288.1 bits), Expect = 6.4e-96, Sum P(2) = 6.4e-96
 Identities = 208/552 (37%), Positives = 296/552 (53%)

Query:   100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
             VRRV P+FSIPP +  EVM    +NL+CVAVG+PMP+VKW  G   ELT +D++PVGRNV
Sbjct:   100 VRRVAPRFSIPP-SNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVE-ELTKEDEMPVGRNV 157

Query:   160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
             L L+ + +S NYTC+A S LG+IE +  + ++        LP  P +  ++E TATSV L
Sbjct:   158 LELNNIMQSANYTCVAISSLGMIEATAQITIKA-------LPKPPTEPLVTETTATSVTL 210

Query:   220 DW-TYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
              W +  S+ + YYVIQYKPK+    + E+ G+ TT Y++  LSP++EYEF +IAVNN+GR
Sbjct:   211 TWDSGNSDPISYYVIQYKPKSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGR 270

Query:   279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI-------TAKHHR 331
             GPPS      TGE  P + P  VQ R LS+STM++QW++PE PNGQI       T   H 
Sbjct:   271 GPPSELVEARTGEQAPSSPPLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDSHL 330

Query:   332 RIGLVETYS-----LT---GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ-YGKTPGF 382
              + + + ++     LT    L   T Y I + A +  G+G  +  I V+T+Q     P  
Sbjct:   331 PLSMWQKHNTDDSHLTTVGSLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPAD 390

Query:   383 GEQAAKHHRRIGLVETYSLTGLYPNTLYYI--WLAAQSPRGEGATTPPIPVRTKQYGKTP 440
              +  A+   RI L  T+        T Y +  W       GE      +     ++  T 
Sbjct:   391 FQAEAESDTRILL--TWLPASQERITKYELLYW------EGEDGVQQKV-----EFDPTS 437

Query:   441 GFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVI 500
              +  + L P+TLY   L A S  G G  TP +  RT Q  P   P++V+    SS+T+ +
Sbjct:   438 SYAVEGLKPDTLYKFRLGAHSELGVGVYTPTVEARTAQSTPSAPPQEVECVSTSSTTIRV 497

Query:   501 QWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDN----NQLTTISDLTPHTIYTI 554
              W  P  ++ NG IT Y + Y   Q++        VVD     +    I DL   T Y +
Sbjct:   498 SWVPPPAQSRNGVITQYSIAY---QAVEGDDSTKHVVDGIGREHSSWEIKDLEKWTEYKV 554

Query:   555 RVQAFTSVGPGPLSAPVLVKTQQGVPSQP-RDLRAVDIQETAVTLAWSKPTHSGEN--II 611
              V+A T VGPGP S PV V+T + VPS P R +    +  TA+ ++W  P  + ++  I 
Sbjct:   555 WVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESVNSTAIRVSWKLPISNKQHGQIR 614

Query:   612 SYELYWNDTYAK 623
              Y++    TY K
Sbjct:   615 GYQV----TYVK 622

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|F1SMP3 PTPRD "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 850 (304.3 bits), Expect = 5.1e-95, Sum P(2) = 5.1e-95
 Identities = 227/641 (35%), Positives = 327/641 (51%)

Query:   100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
             VRRVPP+FSIPP    E+M    +N++CVAVGSPMP+VKW  G   +LTP+D +P+GRNV
Sbjct:   103 VRRVPPRFSIPPTNH-EIMPGGSVNITCVAVGSPMPYVKWMLGAE-DLTPEDDMPIGRNV 160

Query:   160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
             L L+ V +S NYTC+A S LGVIE   I ++  K      LP  P    ++E TATS+ L
Sbjct:   161 LELNDVRQSANYTCVAMSTLGVIEA--IAQITVK-----ALPKPPGTPVVTESTATSITL 213

Query:   220 DWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
              W   + E + YY+IQ+KPK +  PY EI G+ TT Y+V  LSPY++YEF ++AVNN+GR
Sbjct:   214 TWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGVATTRYSVAGLSPYSDYEFRVVAVNNIGR 273

Query:   279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------K 328
             GPPS P +  T E  P +APRDVQ R LSS+T+++QW EPE PNGQI            +
Sbjct:   274 GPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQ 333

Query:   329 H-----HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFG 383
             H        +   +  ++  L P   Y + + A +  G+G  +  I V T Q G  PG  
Sbjct:   334 HVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVIT-QTG-VPGQP 391

Query:   384 EQ-AAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGF 442
                 A+      ++   S T    +T+    L  +   GE      I +     G +  +
Sbjct:   392 LNFKAEPESETSIL--LSWTPPRSDTIANYELVYKD--GEHGEEQRITIEP---GTS--Y 442

Query:   443 GEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQW 502
               Q L PN+LYY  LAA+SP+G GA+T  I  RT Q +P   P+D+     SS+++++ W
Sbjct:   443 RLQGLRPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVSW 502

Query:   503 DEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAF 559
               P  E  NG IT Y + YT          E   + ++     +  L   T Y I V A 
Sbjct:   503 QPPPVEKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKYLLEQLEKWTEYRITVTAH 562

Query:   560 TSVGPGPLSAPVLVKTQQGVPS-QPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 618
             T VGPGP S  VL++T + VPS  PR +    +  T+V ++W  P  + ++         
Sbjct:   563 TDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQH--------- 613

Query:   619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYS 678
                     +R   +    +     K     ++++  +  W   +     H  I       
Sbjct:   614 ------GQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQWE--FDDTTEHDMI------- 658

Query:   679 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
             ++GL P T Y + + A + +G+GA + P  V T   VPG P
Sbjct:   659 ISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKP 699

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|F1MJR2 PTPRD "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 831 (297.6 bits), Expect = 1.6e-93, Sum P(2) = 1.6e-93
 Identities = 209/548 (38%), Positives = 297/548 (54%)

Query:   100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
             VRRVPP+FSIPP    E+M    +N++CVAVGSPMP+VKW  G   +LTP+D +P+GRNV
Sbjct:   103 VRRVPPRFSIPPTNH-EIMPGGSVNITCVAVGSPMPYVKWMLGAE-DLTPEDDMPIGRNV 160

Query:   160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
             L L+ V +S NYTC+A S LGVIE   I ++  K      LP  P    ++E TATS+ L
Sbjct:   161 LELNDVRQSANYTCVAMSTLGVIEA--IAQITVK-----ALPKPPGTPVVTESTATSITL 213

Query:   220 DWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
              W   + E + YY+IQ+KPK +  PY EI G+ TT Y+V  LSPY++YEF ++AVNN+GR
Sbjct:   214 TWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGVATTRYSVAGLSPYSDYEFRVVAVNNIGR 273

Query:   279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------K 328
             GPPS P +  T E  P +APRDVQ R LSS+T+++QW EPE PNGQI            +
Sbjct:   274 GPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQ 333

Query:   329 H-----HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFG 383
             H        +   +  ++  L P   Y + + A +  G+G  +  I V T Q G  PG  
Sbjct:   334 HVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVIT-QTG-VPG-- 389

Query:   384 EQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKT---- 439
              Q           E  S T         I L+   PR +   +  +  +  ++G+     
Sbjct:   390 -QPLNFK-----AEPESETS--------ILLSWTPPRSDTIASYELVYKDGEHGEEQRIT 435

Query:   440 --PG--FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSS 495
               PG  +  Q L PN+LYY  LAA+SP+G GA+T  I  RT Q +P   P+D+     SS
Sbjct:   436 IEPGTSYRLQGLRPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSS 495

Query:   496 STMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIY 552
             +++++ W  P  +  NG IT Y + YT          E   + ++     +  L   T Y
Sbjct:   496 TSILVSWQPPPVDKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKYLLEQLEKWTEY 555

Query:   553 TIRVQAFTSVGPGPLSAPVLVKTQQGVPS-QPRDLRAVDIQETAVTLAWSKPTHSGEN-- 609
              I V A T VGPGP S  VL++T + VPS  PR +    +  T+V ++W  P  + ++  
Sbjct:   556 RITVTAHTDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQ 615

Query:   610 IISYELYW 617
             I  Y++++
Sbjct:   616 IRGYQVHY 623

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|F1PH17 PTPRD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 834 (298.6 bits), Expect = 2.1e-93, Sum P(2) = 2.1e-93
 Identities = 210/548 (38%), Positives = 297/548 (54%)

Query:   100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
             VRRVPP+FSIPP    E+M    +N++CVAVGSPMP+VKW  G   +LTP+D +P+GRNV
Sbjct:   218 VRRVPPRFSIPPTNH-EIMPGGSVNITCVAVGSPMPYVKWMLGAE-DLTPEDDMPIGRNV 275

Query:   160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
             L L+ V +S NYTC+A S LGVIE   I ++  K      LP  P    ++E TATS+ L
Sbjct:   276 LELNDVRQSANYTCVAMSTLGVIEA--IAQITVK-----ALPKPPGTPVVTESTATSITL 328

Query:   220 DWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
              W   + E + YY+IQ+KPK +  PY EI G+ TT Y+V  LSPY++YEF ++AVNN+GR
Sbjct:   329 TWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGVATTRYSVAGLSPYSDYEFRVVAVNNIGR 388

Query:   279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------K 328
             GPPS P +  T E  P +APRDVQ R LSS+T+++QW EPE PNGQI            +
Sbjct:   389 GPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQ 448

Query:   329 H-----HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFG 383
             H        +   +  ++  L P   Y + + A +  G+G  +  I V T Q G  PG  
Sbjct:   449 HVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVIT-QTG-VPG-- 504

Query:   384 EQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKT---- 439
              Q           E  S T         I L+   PR +   +  +  +  ++G+     
Sbjct:   505 -QPLNFK-----AEPESETS--------ILLSWTPPRSDTIASYELVYKDGEHGEEQRVT 550

Query:   440 --PG--FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSS 495
               PG  +  Q L PN+LYY  LAA+SP+G GA+T  I  RT Q +P   P+D+     SS
Sbjct:   551 IEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSS 610

Query:   496 STMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIY 552
             +++++ W  P  E  NG IT Y + YT          E   + ++     +  L   T Y
Sbjct:   611 TSILVSWQPPPVEKQNGIITEYSIKYTSVDGEDDKPHEILGIPSDTTKYLLEQLEKWTEY 670

Query:   553 TIRVQAFTSVGPGPLSAPVLVKTQQGVPS-QPRDLRAVDIQETAVTLAWSKPTHSGEN-- 609
              I V A T VGPGP S  VL++T + VPS  PR +    +  T+V ++W  P  + ++  
Sbjct:   671 RITVTAHTDVGPGPESFSVLIRTDEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQ 730

Query:   610 IISYELYW 617
             I  Y++++
Sbjct:   731 IRGYQVHY 738

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|A7MBJ4 PTPRF "Receptor-type tyrosine-protein phosphatase F" [Bos taurus (taxid:9913)]

 Score = 795 (284.9 bits), Expect = 2.5e-93, Sum P(2) = 2.5e-93
 Identities = 215/577 (37%), Positives = 300/577 (51%)

Query:   100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
             VRRV P+FSIPP +  EVM    +NL+CVAVG+PMP+VKW  G   ELT +D++PVGRNV
Sbjct:   227 VRRVAPRFSIPPSSQ-EVMPGGSVNLTCVAVGAPMPYVKWMMGAE-ELTKEDEMPVGRNV 284

Query:   160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
             L L  V  S NYTC+A S LG+IE +  V V+        LP  P+D+ ++E TATSV L
Sbjct:   285 LELSNVVRSANYTCVAISSLGMIEATAQVTVKA-------LPKPPIDLVVTETTATSVTL 337

Query:   220 DW-TYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
              W +  SE + YY IQY+P  A  P+ E+ G+ TT Y++  LSP++EY F ++AVN++GR
Sbjct:   338 TWDSGNSEPVSYYGIQYRPAGAEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGR 397

Query:   279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI-------TAKHHR 331
             GPPS      TGE  P + PR VQ R LS+STM++QW+ PE PNG +       T    R
Sbjct:   398 GPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRR 457

Query:   332 RIGLVETYS-----LT---GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFG 383
              +     ++     LT    L P   Y + + A +  G+G  +P I V+T+Q     G  
Sbjct:   458 PLSAWHKHNTDAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQ-----GVP 512

Query:   384 EQAAKHHRRIGLVETYSLTGLYP--NTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPG 441
              Q A     +       L+ L P    +    L   +   EG            +  T  
Sbjct:   513 AQPADFQAEVDSDTRIQLSWLLPPQERIVKYELVYWAAEDEGQQ------HKVTFDPTSS 566

Query:   442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQ 501
             +  + L P+TLY   LAA+S  G G  TP I  RT Q  P   P+ V    + S+T+ + 
Sbjct:   567 YTVEDLKPDTLYRFQLAARSELGVGVFTPTIEARTAQSTPSAPPQKVTCVSVGSTTVRVS 626

Query:   502 WDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDN----NQLTTISDLTPHTIYTIR 555
             W  P  ++ NG IT Y V Y   +++        VVD     +    +  L   T Y + 
Sbjct:   627 WVPPPADSRNGVITQYSVAY---EAVDGEDRGRHVVDGIGREHSSWDLVGLEKWTEYRVW 683

Query:   556 VQAFTSVGPGPLSAPVLVKTQQGVPS-QPRDLRAVDIQETAVTLAWSKPTHSGEN--IIS 612
             V+A T VGPGP S+PVLV+T + VPS  PR +    +  TAV ++W  P  S ++  I  
Sbjct:   684 VRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNSTAVRVSWKLPVPSKQHGQIRG 743

Query:   613 YEL-YWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSG 648
             Y++ Y      +PR   A  IQ+  +  A  + T SG
Sbjct:   744 YQVTYVRLENGEPRG--APIIQDVMLAEA-QETTISG 777

GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=ISS

GO:0004725 "protein tyrosine phosphatase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|P23468 PTPRD "Receptor-type tyrosine-protein phosphatase delta" [Homo sapiens (taxid:9606)]

 Score = 844 (302.2 bits), Expect = 3.5e-93, Sum P(2) = 3.5e-93
 Identities = 228/648 (35%), Positives = 331/648 (51%)

Query:    93 VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK 152
             VR++ + VRRVPP+FSIPP    E+M    +N++CVAVGSPMP+VKW  G   +LTP+D 
Sbjct:   225 VRELRE-VRRVPPRFSIPPTNH-EIMPGGSVNITCVAVGSPMPYVKWMLGAE-DLTPEDD 281

Query:   153 LPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEV 212
             +P+GRNVL L+ V +S NYTC+A S LGVIE   I ++  K      LP  P    ++E 
Sbjct:   282 MPIGRNVLELNDVRQSANYTCVAMSTLGVIEA--IAQITVK-----ALPKPPGTPVVTES 334

Query:   213 TATSVRLDWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYII 271
             TATS+ L W   + E + YY+IQ+KPK +   Y EI G+ TT Y+V  LSPY++YEF ++
Sbjct:   335 TATSITLTWDSGNPEPVSYYIIQHKPKNSEELYKEIDGVATTRYSVAGLSPYSDYEFRVV 394

Query:   272 AVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA---- 327
             AVNN+GRGPPS P +  T E  P +APRDVQ R LSS+T+++QW EPE PNGQI      
Sbjct:   395 AVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVY 454

Query:   328 ------KH-----HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY 376
                   +H        +   +  ++  L P   Y + + A +  G+G  +  I V T Q 
Sbjct:   455 YTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVIT-QT 513

Query:   377 GKTPGFGEQ-AAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 435
             G  PG      A+      ++   S T    +T+    L  +   GE      I +    
Sbjct:   514 G-VPGQPLNFKAEPESETSIL--LSWTPPRSDTIANYELVYKD--GEHGEEQRITIEP-- 566

Query:   436 YGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSS 495
              G +  +  Q L PN+LYY  LAA+SP+G GA+T  I  RT Q +P   P+D+     SS
Sbjct:   567 -GTS--YRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSS 623

Query:   496 STMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIY 552
             +++++ W  P  E  NG IT Y + YT          E   + ++     +  L   T Y
Sbjct:   624 TSILVSWQPPPVEKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKYLLEQLEKWTEY 683

Query:   553 TIRVQAFTSVGPGPLSAPVLVKTQQGVPS-QPRDLRAVDIQETAVTLAWSKPTHSGENII 611
              I V A T VGPGP S  VL++T + VPS  PR +    +  T+V ++W  P  + ++  
Sbjct:   684 RITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQH-- 741

Query:   612 SYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI 671
                            +R   +    +     K     ++++  +  W   +     H  I
Sbjct:   742 -------------GQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQWE--FDDTTEHDMI 786

Query:   672 GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
                    ++GL P T Y + + A + +G+GA + P  V T   VPG P
Sbjct:   787 -------ISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKP 827

GO:0005515 "protein binding" evidence=IPI

GO:0006470 "protein dephosphorylation" evidence=TAS

GO:0005001 "transmembrane receptor protein tyrosine phosphatase activity" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0006796 "phosphate-containing compound metabolic process" evidence=NAS

GO:0007185 "transmembrane receptor protein tyrosine phosphatase signaling pathway" evidence=TAS

GO:0007157 "heterophilic cell-cell adhesion" evidence=ISS

GO:0030182 "neuron differentiation" evidence=ISS

GO:0050775 "positive regulation of dendrite morphogenesis" evidence=ISS

GO:0097105 "presynaptic membrane assembly" evidence=ISS

GO:0005102 "receptor binding" evidence=ISS

GO:0050839 "cell adhesion molecule binding" evidence=ISS

UNIPROTKB|G3XAE2 PTPRD "Receptor-type tyrosine-protein phosphatase delta" [Homo sapiens (taxid:9606)]

 Score = 840 (300.8 bits), Expect = 9.2e-93, Sum P(2) = 9.2e-93
 Identities = 226/641 (35%), Positives = 326/641 (50%)

Query:   100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
             VRRVPP+FSIPP    E+M    +N++CVAVGSPMP+VKW  G   +LTP+D +P+GRNV
Sbjct:   218 VRRVPPRFSIPPTNH-EIMPGGSVNITCVAVGSPMPYVKWMLGAE-DLTPEDDMPIGRNV 275

Query:   160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
             L L+ V +S NYTC+A S LGVIE   I ++  K      LP  P    ++E TATS+ L
Sbjct:   276 LELNDVRQSANYTCVAMSTLGVIEA--IAQITVK-----ALPKPPGTPVVTESTATSITL 328

Query:   220 DWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
              W   + E + YY+IQ+KPK +   Y EI G+ TT Y+V  LSPY++YEF ++AVNN+GR
Sbjct:   329 TWDSGNPEPVSYYIIQHKPKNSEELYKEIDGVATTRYSVAGLSPYSDYEFRVVAVNNIGR 388

Query:   279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------K 328
             GPPS P +  T E  P +APRDVQ R LSS+T+++QW EPE PNGQI            +
Sbjct:   389 GPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQ 448

Query:   329 H-----HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFG 383
             H        +   +  ++  L P   Y + + A +  G+G  +  I V T Q G  PG  
Sbjct:   449 HVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVIT-QTG-VPGQP 506

Query:   384 EQ-AAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGF 442
                 A+      ++   S T    +T+    L  +   GE      I +     G +  +
Sbjct:   507 LNFKAEPESETSIL--LSWTPPRSDTIANYELVYKD--GEHGEEQRITIEP---GTS--Y 557

Query:   443 GEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQW 502
               Q L PN+LYY  LAA+SP+G GA+T  I  RT Q +P   P+D+     SS+++++ W
Sbjct:   558 RLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVSW 617

Query:   503 DEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAF 559
               P  E  NG IT Y + YT          E   + ++     +  L   T Y I V A 
Sbjct:   618 QPPPVEKQNGIITEYSIKYTAVDGEDDKPHEILGIPSDTTKYLLEQLEKWTEYRITVTAH 677

Query:   560 TSVGPGPLSAPVLVKTQQGVPS-QPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 618
             T VGPGP S  VL++T + VPS  PR +    +  T+V ++W  P  + ++         
Sbjct:   678 TDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAVNSTSVKVSWRSPVPNKQH--------- 728

Query:   619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYS 678
                     +R   +    +     K     ++++  +  W   +     H  I       
Sbjct:   729 ------GQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQWE--FDDTTEHDMI------- 773

Query:   679 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
             ++GL P T Y + + A + +G+GA + P  V T   VPG P
Sbjct:   774 ISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKP 814

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|F1NQ48 F1NQ48 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 876 (313.4 bits), Expect = 1.4e-92, Sum P(3) = 1.4e-92
 Identities = 239/672 (35%), Positives = 349/672 (51%)

Query:    93 VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK 152
             VR++ + VRRVPP+FSIPP    E+M    +N++CVAVGSPMP+VKW  G   +LTP+D 
Sbjct:   226 VRELRE-VRRVPPRFSIPPTNH-EIMPGGSVNITCVAVGSPMPYVKWMLGAE-DLTPEDD 282

Query:   153 LPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEV 212
             +P+GRNVL L+ V +S NYTC+A S LGVIE   I ++  K      LP  P    ++E 
Sbjct:   283 MPIGRNVLELNDVRQSANYTCVAMSTLGVIEA--IAQITVK-----ALPKPPGTPVVTES 335

Query:   213 TATSVRLDWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYII 271
             TATS+ L W   + E + YY+IQ KPK +  PY EI G+ TT Y+V  LSPY+EYEF ++
Sbjct:   336 TATSITLTWDSGNPEPVSYYMIQLKPKNSEEPYKEIDGVATTRYSVAGLSPYSEYEFRVV 395

Query:   272 AVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA---- 327
             AVNN+GRGPPS P    T E  P +APR+VQ R LSS+T+++QW+EPE PNGQI      
Sbjct:   396 AVNNIGRGPPSEPVSTRTSEQAPSSAPRNVQARMLSSTTILVQWEEPEEPNGQIQGYRVY 455

Query:   328 ------KHHR---RIGLVETYSLT--GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY 376
                   +H     +  + +++  T   L P   Y + + A +  G+G  +  I V T Q 
Sbjct:   456 YTMDPTQHVNSWLKHNVADSHITTIGNLVPQKTYSVKVLAFTSVGDGPLSSDIQVIT-QT 514

Query:   377 GKTPGFGEQ-AAKHHRRIGLVETYSLTGLYPNTLY-YIWLAAQSPRGEGATTPPIPVRTK 434
             G  PG      A+      ++   S T    +T+  Y  +      GE       P    
Sbjct:   515 G-VPGQPLNFKAEPESETSIL--LSWTPPRSDTISSYELVYKDGEHGEEQRVSTEP---- 567

Query:   435 QYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS 494
                 T  +  Q L PN+LY   LAA+SP+G GA+T  I  RT Q +P   P+D+     S
Sbjct:   568 ----TTSYRLQGLKPNSLYLFRLAARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPS 623

Query:   495 SSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTI 551
             S+++++ W  P  E  NG IT Y + Y +     +   E   + ++     +  L   T 
Sbjct:   624 STSILVSWKPPPVENQNGIITAYSIKYIEIDGEDVKPHEILGISSDSTQYLLEQLEKWTE 683

Query:   552 YTIRVQAFTSVGPGPLSAPVLVKTQQGVPS-QPRDLRAVDIQETAVTLAWSKPTHSGEN- 609
             Y I V A T VGPGP S  VL++T + VPS  PR +    +  TAV ++W  P  + ++ 
Sbjct:   684 YRISVTAHTDVGPGPESLAVLIRTDEDVPSGPPRKVEVEAVNSTAVKVSWRSPVPNKQHG 743

Query:   610 -IISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHH 668
              I  Y++++                   V +   +P   G+ ++  ++   D     +H 
Sbjct:   744 QIRGYQVHY-------------------VRMENGEP--KGQPMLK-DIMLADAQTM-RHD 780

Query:   669 RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL 728
              R  L     ++GL P+T Y   + A + +G+GA + P  V T   VPG P   +S   +
Sbjct:   781 ERTSL--EMIISGLQPDTTYSFTVTAYTTKGDGARSKPKLVSTTGAVPGKPRLVISHTQM 838

Query:   729 SSTSIRISWEPP 740
             + T++ I W PP
Sbjct:   839 N-TAL-IQWHPP 848

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|F1M2Y2 Ptprd "Protein Ptprd" [Rattus norvegicus (taxid:10116)]

 Score = 821 (294.1 bits), Expect = 1.4e-92, Sum P(2) = 1.4e-92
 Identities = 211/549 (38%), Positives = 294/549 (53%)

Query:    99 PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN 158
             PVRRVPP+FSIPP    E+M    +N++CVAVGSPMP+VKW  G   +LTP+D +P+GRN
Sbjct:    22 PVRRVPPRFSIPPTNH-EIMPGGSVNITCVAVGSPMPYVKWMLGAE-DLTPEDDMPIGRN 79

Query:   159 VLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVR 218
             VL L+ V +S NYTC+A S LGVIE   + ++  K      LP  P    ++E TATS+ 
Sbjct:    80 VLELNDVRQSANYTCVAMSTLGVIEA--VAQITVK-----ALPKPPGTPVVTESTATSIT 132

Query:   219 LDWTYPS-ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277
             L W   + E + YY+IQ+KPK +  PY EI GI TT Y+V  LSPY++YEF ++AVNN+G
Sbjct:   133 LTWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGIATTRYSVAGLSPYSDYEFRVVAVNNIG 192

Query:   278 RGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA---------- 327
             RGP S P +  T E  P +APRDVQ R LSS+T+++QW EPE PNGQI            
Sbjct:   193 RGPASEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPT 252

Query:   328 KH-----HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGF 382
             +H        +   +  ++  L P   Y + + A +  G+G  +  I V T Q G  PG 
Sbjct:   253 QHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVIT-QTG-VPG- 309

Query:   383 GEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKT--- 439
               Q           E  S T         I L+   PR +   +  +  R    G+    
Sbjct:   310 --QPLNFK-----AEPESETS--------ILLSWTPPRSDTIASYELVYRDGDQGEEQRI 354

Query:   440 ---PG--FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS 494
                PG  +  Q L PN+LYY  L+A+SP+G GA+T  I  RT Q EP   P+D+     S
Sbjct:   355 TIEPGTSYRLQGLKPNSLYYFRLSARSPQGLGASTAEISARTMQ-EPSAPPQDISCTSPS 413

Query:   495 SSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTI 551
             S+++++ W  P  E  NG IT Y + Y           E   + ++     +  L   T 
Sbjct:   414 STSILVSWQPPPVEKQNGIITEYSLKYAAVDGEDYRPHEILGIPSDTTKYLLEQLEKWTE 473

Query:   552 YTIRVQAFTSVGPGPLSAPVLVKTQQGVPS-QPRDLRAVDIQETAVTLAWSKPTHSGEN- 609
             Y I V A T VGPGP S  VL++T + VPS  PR +    +  TAV ++W  P  + ++ 
Sbjct:   474 YRITVTAHTDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAVNATAVKVSWRSPVPNKQHG 533

Query:   610 -IISYELYW 617
              I  Y++++
Sbjct:   534 QIRGYQVHY 542

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P16621	LAR_DROME	3, ., 1, ., 3, ., 4, 8	0.5495	0.4601	0.2050	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	904
cd05739	69	cd05739, Ig3_RPTP_IIa_LAR_like, Third immunoglobul	5e-25
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	2e-18
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	6e-17
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	9e-17
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	6e-15
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	2e-13
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	4e-13
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	5e-13
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	6e-13
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	5e-12
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	2e-11
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	1e-09
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	2e-09
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	3e-09
pfam07679	90	pfam07679, I-set, Immunoglobulin I-set domain	7e-08
smart00410	85	smart00410, IG_like, Immunoglobulin like	1e-07
smart00409	85	smart00409, IG, Immunoglobulin	1e-07
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	2e-06
smart00408	63	smart00408, IGc2, Immunoglobulin C-2 Type	4e-06
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	5e-06
cd05725	69	cd05725, Ig3_Robo, Third immunoglobulin (Ig)-like	2e-05
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	3e-05
cd00096	74	cd00096, Ig, Immunoglobulin domain	3e-04
pfam00047	62	pfam00047, ig, Immunoglobulin domain	4e-04
cd05849	93	cd05849, Ig1_Contactin-1, First Ig domain of conta	0.001
cd05729	85	cd05729, Ig2_FGFR_like, Second immunoglobulin (Ig)	0.002
cd05731	71	cd05731, Ig3_L1-CAM_like, Third immunoglobulin (Ig	0.002

>gnl|CDD|143216 cd05739, Ig3_RPTP_IIa_LAR_like, Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

 Score = 98.8 bits (246), Expect = 5e-25
 Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 1/69 (1%)

Query: 121 SPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLG 180
             +NL+CVAVG+PMP+VKW KG   ELT +D++PVGRNVL L  + ES NYTC+A S LG
Sbjct: 2   GSVNLTCVAVGAPMPYVKWMKGG-EELTKEDEMPVGRNVLELTNIYESANYTCVAISSLG 60

Query: 181 VIETSTIVK 189
           +IE +  V 
Sbjct: 61  MIEATAQVT 69

Ig3_RPTP_IIa_LAR_like: domain similar to the third immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple IG-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains. Included in this group is Drosophila LAR (DLAR). Length = 69

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 80.6 bits (199), Expect = 2e-18
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 1/92 (1%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P +++V  ++S+++ + W  PE   G ITGY V Y +  S      E          T+
Sbjct: 3   PPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSY-TL 61

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
           + L P T Y  RV+A    G  P S  V V T
Sbjct: 62  TGLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 76.4 bits (188), Expect = 6e-17
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
           PP N+    ++STS+ +SW PP      G I  Y +++ E G  D +   VT  ++TS+ 
Sbjct: 3   PPTNLRVTDVTSTSVTLSWTPPE--DDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYT 60

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           L  LK  TEY   V A    G+ P S  +T+ T
Sbjct: 61  LTGLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 76.0 bits (187), Expect = 9e-17
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 4/93 (4%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYS-EISGIITTYYT 256
           P  P ++++++VT+TSV L WT P +    +  YV++Y+ K +      E++    T YT
Sbjct: 1   PSPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYT 60

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           +  L P TEYEF + AVN  G  PPS    +TT
Sbjct: 61  LTGLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 70.5 bits (173), Expect = 6e-15
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-T 542
           AP ++ V  ++S+++ + W  P   NG ITGY+V Y          W+   V     + T
Sbjct: 2   APTNLTVTDVTSTSLTLSWSPP-PGNGPITGYEVEYRPVNG--GEEWKEITVPGTTTSYT 58

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLS 568
           ++ L P T Y +RVQA    G GP S
Sbjct: 59  LTGLKPGTEYEVRVQAVNGAGEGPPS 84

Length = 84

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 66.3 bits (162), Expect = 2e-13
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P N++   ++STS+ +SW PPP    NG I  Y++++      +    I      TS+ 
Sbjct: 2   APTNLTVTDVTSTSLTLSWSPPP---GNGPITGYEVEYRPVNGGEEWKEITVPGTTTSYT 58

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSS 804
           L  LK  TEY + V A    G+GP S
Sbjct: 59  LTGLKPGTEYEVRVQAVNGAGEGPPS 84

Length = 84

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 65.3 bits (159), Expect = 4e-13
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-T 542
            P +++V  ++S+++ + W+ P       TGY V Y  +     S W+   V  +  + T
Sbjct: 3   PPSNLRVTDVTSTSVTLSWEPPPDDGI--TGYIVGYRVEYREEGSEWKEVNVTPSSTSYT 60

Query: 543 ISDLTPHTIYTIRVQAFTSVGPG 565
           ++ L P T Y  RV+A    G G
Sbjct: 61  LTGLKPGTEYEFRVRAVNGAGEG 83

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 65.1 bits (159), Expect = 5e-13
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 203 APLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPYSEISGII---TTYYTV 257
           AP ++ +++VT+TS+ L W+ P  +  +  Y ++Y+P   N         +   TT YT+
Sbjct: 2   APTNLTVTDVTSTSLTLSWSPPPGNGPITGYEVEYRPV--NGGEEWKEITVPGTTTSYTL 59

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPS 282
             L P TEYE  + AVN  G GPPS
Sbjct: 60  TGLKPGTEYEVRVQAVNGAGEGPPS 84

Length = 84

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 64.9 bits (158), Expect = 6e-13
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
           PP N+    ++STS+ +SWEPPP +   G+IV Y++++ E G       +    + TS+ 
Sbjct: 3   PPSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEG--SEWKEVNVTPSSTSYT 60

Query: 779 LDELKKWTEYRIWVLAGTSIGDG 801
           L  LK  TEY   V A    G+G
Sbjct: 61  LTGLKPGTEYEFRVRAVNGAGEG 83

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 62.5 bits (152), Expect = 5e-12
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA--KHHRRIGLVETYSLT 680
            P +LR  D+  T+VTL+W+ P   G  I  Y + + +  +    +     G   +Y+LT
Sbjct: 3   PPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYTLT 62

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
           GL P T Y   + A +  GE   +  + V T
Sbjct: 63  GLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 60.3 bits (146), Expect = 2e-11
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGIITTYY 255
           P  P ++++++VT+TSV L W  P +      ++ Y ++Y+ + +           +T Y
Sbjct: 1   PSPPSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEGSEW-KEVNVTPSSTSY 59

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRG 279
           T+  L P TEYEF + AVN  G G
Sbjct: 60  TLTGLKPGTEYEFRVRAVNGAGEG 83

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 55.5 bits (134), Expect = 1e-09
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 3/84 (3%)

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL-YWNDTYAKAKHHRRIGLVE-TYSLT 680
            P +L   D+  T++TL+WS P  +G  I  YE+ Y      +      +     +Y+LT
Sbjct: 2   APTNLTVTDVTSTSLTLSWSPPPGNGP-ITGYEVEYRPVNGGEEWKEITVPGTTTSYTLT 60

Query: 681 GLYPNTLYYIWLAAQSPRGEGATT 704
           GL P T Y + + A +  GEG  +
Sbjct: 61  GLKPGTEYEVRVQAVNGAGEGPPS 84

Length = 84

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 54.9 bits (132), Expect = 2e-09
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGEN--IISYELYWNDTYAKAKHHRRIGLVETYSLTG 681
           P +LR  D+  T+VTL+W  P   G    I+ Y + + +  ++ K         +Y+LTG
Sbjct: 4   PSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEGSEWKEVNVTPSSTSYTLTG 63

Query: 682 LYPNTLYYIWLAAQSPRGEG 701
           L P T Y   + A +  GEG
Sbjct: 64  LKPGTEYEFRVRAVNGAGEG 83

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 54.4 bits (131), Expect = 3e-09
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 14/91 (15%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNGQITA--------------KHHRRIGLVETYSLT 342
            P +++V  ++S+++ + W  PE   G IT               +     G   +Y+LT
Sbjct: 3   PPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYTLT 62

Query: 343 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
           GL P T Y   + A +  GE   +  + V T
Sbjct: 63  GLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|191810 pfam07679, I-set, Immunoglobulin I-set domain

 Score = 50.7 bits (122), Expect = 7e-08
 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 8/92 (8%)

Query: 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVL 160
           P+F+  P  + EV        +C   G P P V W K     L   D+  V    G   L
Sbjct: 1   PKFTQKPKDV-EVQEGESARFTCTVTGDPDPTVSWFKD-GQPLRSSDRFKVTYEGGTYTL 58

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKV 190
           T+  V   +   YTC+A +  G  E S  + V
Sbjct: 59  TISNVQPDDEGKYTCVATNSAGEAEASAELTV 90

Length = 90

>gnl|CDD|214653 smart00410, IG_like, Immunoglobulin like

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 112 PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN----VLTLDRVTE 167
           P  + V     + LSC A GSP P V W K     L    +  V R+     LT+  VT 
Sbjct: 1   PPSVTVKEGESVTLSCEASGSPPPEVTWYKQGGKLLAESGRFSVSRSGSTSTLTISNVTP 60

Query: 168 SE--NYTCIAASVLGVIETSTIVKV 190
            +   YTC A +  G   + T + V
Sbjct: 61  EDSGTYTCAATNSSGSASSGTTLTV 85

IG domains that cannot be classified into one of IGv1, IGc1, IGc2, IG. Length = 85

>gnl|CDD|214652 smart00409, IG, Immunoglobulin

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 112 PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN----VLTLDRVTE 167
           P  + V     + LSC A GSP P V W K     L    +  V R+     LT+  VT 
Sbjct: 1   PPSVTVKEGESVTLSCEASGSPPPEVTWYKQGGKLLAESGRFSVSRSGSTSTLTISNVTP 60

Query: 168 SE--NYTCIAASVLGVIETSTIVKV 190
            +   YTC A +  G   + T + V
Sbjct: 61  EDSGTYTCAATNSSGSASSGTTLTV 85

Length = 85

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 15/84 (17%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNGQIT-------------AKHHRRIGLVE-TYSLT 342
           AP ++ V  ++S+++ + W  P   NG IT                   +     +Y+LT
Sbjct: 2   APTNLTVTDVTSTSLTLSWSPP-PGNGPITGYEVEYRPVNGGEEWKEITVPGTTTSYTLT 60

Query: 343 GLYPNTLYYIWLAAQSPRGEGATT 366
           GL P T Y + + A +  GEG  +
Sbjct: 61  GLKPGTEYEVRVQAVNGAGEGPPS 84

Length = 84

>gnl|CDD|197706 smart00408, IGc2, Immunoglobulin C-2 Type

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESE--NYTCIAAS 177
              + L+C A G+P+P + W K     L   ++     + LT+  V+  +   YTC+A +
Sbjct: 2   GQSVTLTCPAEGNPVPNITWLKD-GKPLPESNRFVASGSTLTIKSVSLEDSGLYTCVAEN 60

Query: 178 VLG 180
             G
Sbjct: 61  SAG 63

Length = 63

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 44.9 bits (106), Expect = 5e-06
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 14/81 (17%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNG--------------QITAKHHRRIGLVETYSLT 342
            P +++V  ++S+++ + W+ P                       K         +Y+LT
Sbjct: 3   PPSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEGSEWKEVNVTPSSTSYTLT 62

Query: 343 GLYPNTLYYIWLAAQSPRGEG 363
           GL P T Y   + A +  GEG
Sbjct: 63  GLKPGTEYEFRVRAVNGAGEG 83

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

>gnl|CDD|143202 cd05725, Ig3_Robo, Third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 15/74 (20%)

Query: 125 LSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGR------NVLTLDRVTESE--NYTCIAA 176
             C   G P+P V WRK        D +LP GR        L +  VT  +  +YTC A 
Sbjct: 3   FQCEVGGDPVPTVLWRK-------EDGELPKGRAEILDDKSLKIRNVTAGDEGSYTCEAE 55

Query: 177 SVLGVIETSTIVKV 190
           +++G IE S  + V
Sbjct: 56  NMVGKIEASASLTV 69

Ig3_Robo: domain similar to the third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagonizes slit responsiveness in precrossing axons. The Slit-Robo interaction is mediated by the second leucine-rich repeat (LRR) domain of Slit and the two N-terminal Ig domains of Robo, Ig1 and Ig2. The primary Robo binding site for Slit2 has been shown by surface plasmon resonance experiments and mutational analysis to be is the Ig1 domain, while the Ig2 domain has been proposed to harbor a weak secondary binding site. Length = 69

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKT 892
            D    +V+ G      +TGL+P T Y  +V A+   G+   S+  T+ T
Sbjct: 44  GDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|143165 cd00096, Ig, Immunoglobulin domain

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 9/73 (12%)

Query: 123 LNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRN------VLTLDRVTESE--NYTC 173
           + L+C+A G P P + W K G+ +  +   ++   R        LT+  VT  +   YTC
Sbjct: 1   VTLTCLASGPPPPTITWLKNGKPLPSSVLTRVRSSRGTSSGSSTLTISNVTLEDSGTYTC 60

Query: 174 IAASVLGVIETST 186
           +A++  G +  S 
Sbjct: 61  VASNSAGTVSASV 73

Ig: immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of this group are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as, T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as, butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond. Length = 74

>gnl|CDD|215677 pfam00047, ig, Immunoglobulin domain

 Score = 39.1 bits (91), Expect = 4e-04
 Identities = 17/61 (27%), Positives = 21/61 (34%), Gaps = 6/61 (9%)

Query: 121 SPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV----LTLDRVTE--SENYTCI 174
           S + L+C   G P   V W K                 V    LT+  VT   S  YTC+
Sbjct: 2   SSVTLTCSVSGPPQVDVTWFKEGKGLEESTTVGTDENRVSSITLTISNVTPEDSGTYTCV 61

Query: 175 A 175
            
Sbjct: 62  V 62

Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions. The Pfam alignments do not include the first and last strand of the immunoglobulin-like domain. Length = 62

>gnl|CDD|143257 cd05849, Ig1_Contactin-1, First Ig domain of contactin-1

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 116 EVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIELTPDDKLPVGRNVL--TLDRVTESENYT 172
           E   +  ++++C A  +P P  KWRK   +I+LT D    VG N++    D+  ++  Y 
Sbjct: 15  EESTEGKVSVNCRARANPFPIYKWRKNNLDIDLTNDRYSMVGGNLVINNPDKYKDAGRYV 74

Query: 173 CIAASVLGVIETS 185
           CI +++ G + + 
Sbjct: 75  CIVSNIYGKVRSR 87

Ig1_Contactin-1: First Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may, through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma. Length = 93

>gnl|CDD|143206 cd05729, Ig2_FGFR_like, Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor and similar proteins

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 114 LLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN-----VLTLDRVTES 168
           L  V   S + L C A G+P P + W K        + ++   +       L L+ V  S
Sbjct: 3   LHAVPAGSTVRLKCPASGNPRPTITWLK-DGKPFKKEHRIGGYKVRKKKWTLILESVVPS 61

Query: 169 E--NYTCIAASVLGVIETSTIVKV 190
           +   YTCI  +  G I  +  V V
Sbjct: 62  DSGKYTCIVENKYGSINHTYKVDV 85

Ig2_FGFR_like: domain similar to the second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor. FGF receptors bind FGF signaling polypeptides. FGFs participate in multiple processes such as morphogenesis, development, and angiogenesis. FGFs bind to four FGF receptor tyrosine kinases (FGFR1, -2, -3, -4). Receptor diversity is controlled by alternative splicing producing splice variants with different ligand binding characteristics and different expression patterns. FGFRs have an extracellular region comprised of three Ig-like domains, a single transmembrane helix, and an intracellular tyrosine kinase domain. Ligand binding and specificity reside in the Ig-like domains 2 and 3, and the linker region that connects these two. FGFR activation and signaling depend on FGF-induced dimerization, a process involving cell surface heparin or heparin sulfate proteoglycans. This group also contains fibroblast growth factor (FGF) receptor_like-1(FGFRL1). FGFRL1 does not have a protein tyrosine kinase domain at its C terminus; neither does its cytoplasmic domain appear to interact with a signaling partner. It has been suggested that FGFRL1 may not have any direct signaling function, but instead acts as a decoy receptor trapping FGFs and preventing them from binding other receptors. Length = 85

>gnl|CDD|143208 cd05731, Ig3_L1-CAM_like, Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 16/78 (20%)

Query: 123 LNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGR-------NVLTLDRVTESE--NYTC 173
           L L C+A G P P + W K          +LP  R         L +D V+E +   Y C
Sbjct: 1   LLLECIAEGLPTPEISWIK-------IGGELPADRTKFENFNKTLKIDNVSEEDDGEYRC 53

Query: 174 IAASVLGVIETSTIVKVQ 191
            A++ LG    +  V V+
Sbjct: 54  TASNSLGSARHTISVTVE 71

Ig3_L1-CAM_like: domain similar to the third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM and human neurofascin. Length = 71

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	904
KOG4221|consensus	1381		100.0
KOG4221|consensus	1381		100.0
KOG3513|consensus	1051		100.0
KOG3513|consensus	1051		100.0
KOG4222|consensus	1281		100.0
KOG4222|consensus	1281		100.0
KOG0196|consensus	996		99.71
KOG0196|consensus	996		99.67
cd05762	98	Ig8_MLCK Eighth immunoglobulin (Ig)-like domain of	99.61
cd05851	88	Ig3_Contactin-1 Third Ig domain of contactin-1. Ig	99.6
KOG4258|consensus	1025		99.57
KOG4194|consensus	873		99.56
cd04968	88	Ig3_Contactin_like Third Ig domain of contactin. I	99.46
cd05728	85	Ig4_Contactin-2-like Fourth Ig domain of the neura	99.45
cd05852	73	Ig5_Contactin-1 Fifth Ig domain of contactin-1. Ig	99.44
cd05739	69	Ig3_RPTP_IIa_LAR_like Third immunoglobulin (Ig)-li	99.44
cd05747	92	Ig5_Titin_like M5, fifth immunoglobulin (Ig)-like	99.42
cd05745	74	Ig3_Peroxidasin Third immunoglobulin (Ig)-like dom	99.4
cd05749	81	Ig2_Tyro3_like Second immunoglobulin (Ig)-like dom	99.38
cd05735	88	Ig8_DSCAM Eight immunoglobulin (Ig) domain of Down	99.37
cd05893	75	Ig_Palladin_C C-terminal immunoglobulin (Ig)-like	99.37
cd05894	86	Ig_C5_MyBP-C C5 immunoglobulin (Ig) domain of card	99.36
cd05892	75	Ig_Myotilin_C C-terminal immunoglobulin (Ig)-like	99.35
cd05867	76	Ig4_L1-CAM_like Fourth immunoglobulin (Ig)-like do	99.35
cd05870	98	Ig5_NCAM-2 Fifth immunoglobulin (Ig)-like domain o	99.34
cd04972	90	Ig_TrkABC_d4 Fourth domain (immunoglobulin-like) o	99.34
cd05723	71	Ig4_Neogenin Fourth immunoglobulin (Ig)-like domai	99.34
cd05868	76	Ig4_NrCAM Fourth immunoglobulin (Ig)-like domain o	99.33
cd05737	92	Ig_Myomesin_like_C C-temrinal immunoglobulin (Ig)-	99.33
cd05869	97	Ig5_NCAM-1 Fifth immunoglobulin (Ig)-like domain o	99.32
cd05849	93	Ig1_Contactin-1 First Ig domain of contactin-1. Ig	99.32
cd05730	95	Ig3_NCAM-1_like Third immunoglobulin (Ig)-like dom	99.32
PF07679	90	I-set: Immunoglobulin I-set domain; InterPro: IPR0	99.31
cd04975	101	Ig4_SCFR_like Fourth immunoglobulin (Ig)-like doma	99.31
cd05865	96	Ig1_NCAM-1 First immunoglobulin (Ig)-like domain o	99.3
PHA02785	326	IL-beta-binding protein; Provisional	99.29
cd05848	94	Ig1_Contactin-5 First Ig domain of contactin-5. Ig	99.28
cd05876	71	Ig3_L1-CAM Third immunoglobulin (Ig)-like domain o	99.28
cd05850	94	Ig1_Contactin-2 First Ig domain of contactin-2. Ig	99.27
cd04969	73	Ig5_Contactin_like Fifth Ig domain of contactin. I	99.27
cd05773	109	Ig8_hNephrin_like Eighth immunoglobulin-like domai	99.27
cd05866	92	Ig1_NCAM-2 First immunoglobulin (Ig)-like domain o	99.26
cd05863	67	Ig2_VEGFR-3 Second immunoglobulin (Ig)-like domain	99.25
cd07693	100	Ig1_Robo First immunoglobulin (Ig)-like domain in	99.25
cd04976	71	Ig2_VEGFR Second immunoglobulin (Ig)-like domain o	99.25
cd05859	101	Ig4_PDGFR-alpha Fourth immunoglobulin (Ig)-like do	99.25
cd05744	75	Ig_Myotilin_C_like Immunoglobulin (Ig)-like domain	99.25
cd04973	79	Ig1_FGFR First immunoglobulin (Ig)-like domain of	99.25
cd04978	76	Ig4_L1-NrCAM_like Fourth immunoglobulin (Ig)-like	99.25
cd05746	69	Ig4_Peroxidasin Fourth immunoglobulin (Ig)-like do	99.23
cd05732	96	Ig5_NCAM-1_like Fifth immunoglobulin (Ig)-like dom	99.23
KOG4258|consensus	1025		99.23
cd05740	91	Ig_CEACAM_D4 Fourth immunoglobulin (Ig)-like domai	99.23
cd05725	69	Ig3_Robo Third immunoglobulin (Ig)-like domain in	99.23
cd05854	85	Ig6_Contactin-2 Sixth Ig domain of contactin-2. Ig	99.22
cd05864	70	Ig2_VEGFR-2 Second immunoglobulin (Ig)-like domain	99.21
cd05748	74	Ig_Titin_like Immunoglobulin (Ig)-like domain of t	99.21
cd05857	85	Ig2_FGFR Second immunoglobulin (Ig)-like domain of	99.2
cd05853	85	Ig6_Contactin-4 Sixth Ig domain of contactin-4. Ig	99.2
cd05743	78	Ig_Perlecan_D2_like Immunoglobulin (Ig)-like domai	99.19
cd05764	74	Ig_2 Subgroup of the immunoglobulin (Ig) superfami	99.19
cd05891	92	Ig_M-protein_C C-terminal immunoglobulin (Ig)-like	99.18
cd05722	95	Ig1_Neogenin First immunoglobulin (Ig)-like domain	99.18
cd05763	75	Ig_1 Subgroup of the immunoglobulin (Ig) superfami	99.17
cd05758	98	Ig5_KIRREL3-like Fifth immunoglobulin (Ig)-like do	99.16
cd05726	90	Ig4_Robo Fhird immunoglobulin (Ig)-like domain in	99.16
cd05760	77	Ig2_PTK7 Second immunoglobulin (Ig)-like domain of	99.15
cd05738	74	Ig2_RPTP_IIa_LAR_like Second immunoglobulin (Ig)-l	99.14
cd05855	79	Ig_TrkB_d5 Fifth domain (immunoglobulin-like) of T	99.14
cd05731	71	Ig3_L1-CAM_like Third immunoglobulin (Ig)-like dom	99.14
cd05724	86	Ig2_Robo Second immunoglobulin (Ig)-like domain in	99.14
cd04974	90	Ig3_FGFR Third immunoglobulin (Ig)-like domain of	99.13
cd07702	72	Ig2_VEGFR-1 Second immunoglobulin (Ig)-like domain	99.11
cd04970	85	Ig6_Contactin_like Sixth Ig domain of contactin. I	99.11
cd05756	94	Ig1_IL1R_like First immunoglobulin (Ig)-like domai	99.11
cd04971	81	Ig_TrKABC_d5 Fifth domain (immunoglobulin-like) of	99.11
cd05856	82	Ig2_FGFRL1-like Second immunoglobulin (Ig)-like do	99.1
cd05858	90	Ig3_FGFR-2 Third immunoglobulin (Ig)-like domain o	99.09
KOG4194|consensus	873		99.09
cd04967	91	Ig1_Contactin First Ig domain of contactin. Ig1_Co	99.08
cd04977	92	Ig1_NCAM-1_like First immunoglobulin (Ig)-like dom	99.07
PHA02785	326	IL-beta-binding protein; Provisional	99.07
PF00041	85	fn3: Fibronectin type III domain; InterPro: IPR003	99.05
PF00041	85	fn3: Fibronectin type III domain; InterPro: IPR003	99.04
cd05736	76	Ig2_Follistatin_like Second immunoglobulin (Ig)-li	98.99
cd05874	77	Ig6_NrCAM Sixth immunoglobulin (Ig)-like domain of	98.98
cd05765	81	Ig_3 Subgroup of the immunoglobulin (Ig) superfami	98.98
cd05754	85	Ig3_Perlecan_like Third immunoglobulin (Ig)-like d	98.97
cd05734	79	Ig7_DSCAM Seventh immunoglobulin (Ig)-like domain	98.97
cd05873	87	Ig_Sema4D_like Immunoglobulin (Ig)-like domain of	98.96
PHA02826	227	IL-1 receptor-like protein; Provisional	98.95
cd05875	77	Ig6_hNeurofascin_like Sixth immunoglobulin (Ig)-li	98.95
cd05733	77	Ig6_L1-CAM_like Sixth immunoglobulin (Ig)-like dom	98.93
cd05882	95	Ig1_Necl-1 First (N-terminal) immunoglobulin (Ig)-	98.93
PHA02826	227	IL-1 receptor-like protein; Provisional	98.92
cd05752	78	Ig1_FcgammaR_like Frst immunoglobulin (Ig)-like do	98.9
cd05750	75	Ig_Pro_neuregulin Immunoglobulin (Ig)-like domain	98.89
cd05898	98	Ig5_KIRREL3 Fifth immunoglobulin (Ig)-like domain	98.88
cd07701	95	Ig1_Necl-3 First (N-terminal) immunoglobulin (Ig)-	98.87
cd05845	95	Ig2_L1-CAM_like Second immunoglobulin (Ig)-like do	98.86
cd05742	84	Ig1_VEGFR_like First immunoglobulin (Ig)-like doma	98.85
cd04979	89	Ig_Semaphorin_C Immunoglobulin (Ig)-like domain of	98.83
cd05757	92	Ig2_IL1R_like Second immunoglobulin (Ig)-like doma	98.83
cd05729	85	Ig2_FGFR_like Second immunoglobulin (Ig)-like doma	98.81
cd05871	91	Ig_Semaphorin_classIII Immunoglobulin (Ig)-like do	98.8
PF10179	300	DUF2369: Uncharacterised conserved protein (DUF236	98.76
cd05895	76	Ig_Pro_neuregulin-1 Immunoglobulin (Ig)-like domai	98.68
cd05717	95	Ig1_Necl-1-3_like First (N-terminal) immunoglobuli	98.64
cd05861	84	Ig1_PDGFR-alphabeta Frst immunoglobulin (Ig)-like	98.63
cd05727	96	Ig2_Contactin-2-like Second Ig domain of the neura	98.62
KOG4802|consensus	516		98.59
smart00408	63	IGc2 Immunoglobulin C-2 Type.	98.58
PF10179	300	DUF2369: Uncharacterised conserved protein (DUF236	98.56
KOG4802|consensus	516		98.56
cd07690	94	Ig1_CD4 First immunoglobulin (Ig) domain of CD4. I	98.55
cd05753	83	Ig2_FcgammaR_like Second immunoglobulin (Ig)-like	98.48
COG3401	343	Fibronectin type 3 domain-containing protein [Gene	98.46
cd00063	93	FN3 Fibronectin type 3 domain; One of three types	98.4
smart00409	86	IG Immunoglobulin.	98.38
smart00410	86	IG_like Immunoglobulin like. IG domains that canno	98.38
cd00063	93	FN3 Fibronectin type 3 domain; One of three types	98.37
cd05862	86	Ig1_VEGFR First immunoglobulin (Ig)-like domain of	98.36
cd05896	104	Ig1_IL1RAPL-1_like First immunoglobulin (Ig)-like	98.29
PF13895	80	Ig_2: Immunoglobulin domain; PDB: 2V5R_B 2V5M_A 2V	98.28
cd05860	101	Ig4_SCFR Fourth immunoglobulin (Ig)-like domain of	98.28
cd05872	85	Ig_Sema4B_like Immunoglobulin (Ig)-like domain of	98.2
cd05897	95	Ig2_IL1R2_like Second immunoglobulin (Ig)-like dom	98.2
cd05885	80	Ig2_Necl-4 Second immunoglobulin (Ig)-like domain	98.18
cd05881	95	Ig1_Necl-2 First (N-terminal) immunoglobulin (Ig)-	98.11
KOG3632|consensus	1335		98.11
PF00047	64	ig: Immunoglobulin domain The Prosite family only	98.11
PF13927	75	Ig_3: Immunoglobulin domain; PDB: 2D3V_A 1G0X_A 1V	98.04
cd05774	105	Ig_CEACAM_D1 First immunoglobulin (Ig)-like domain	98.04
COG3401	343	Fibronectin type 3 domain-containing protein [Gene	97.99
cd05759	82	Ig2_KIRREL3-like Second immunoglobulin (Ig)-like d	97.98
smart00060	83	FN3 Fibronectin type 3 domain. One of three types	97.91
cd05751	91	Ig1_LILRB1_like First immunoglobulin (Ig)-like dom	97.86
KOG4228|consensus	1087		97.85
cd05877	106	Ig_LP_like Immunoglobulin (Ig)-like domain of huma	97.8
cd05900	112	Ig_Aggrecan Immunoglobulin (Ig)-like domain of the	97.8
cd04983	109	IgV_TCR_alpha_like Immunoglobulin (Ig) variable (V	97.79
smart00060	83	FN3 Fibronectin type 3 domain. One of three types	97.76
cd05879	116	Ig_P0 Immunoglobulin (Ig)-like domain of Protein z	97.75
cd05714	106	Ig_CSPGs_LP Immunoglobulin (Ig)-like domain of cho	97.74
cd05713	100	Ig_MOG_like Immunoglobulin (Ig)-like domain of mye	97.74
cd05741	92	Ig_CEACAM_D1_like First immunoglobulin (Ig)-like d	97.7
TIGR00864	2740	PCC polycystin cation channel protein. Note: this	97.69
cd05771	139	IgC_Tapasin_R Tapasin-R immunoglobulin-like domain	97.66
cd05899	110	IgV_TCR_beta Immunoglobulin (Ig) variable (V) doma	97.63
cd05878	110	Ig_Aggrecan_like Immunoglobulin (Ig)-like domain o	97.61
cd05718	98	Ig1_PVR_like First immunoglobulin (Ig) domain of p	97.58
KOG3515|consensus	741		97.55
PHA02987	189	Ig domain OX-2-like protein; Provisional	97.53
cd00099	105	IgV Immunoglobulin variable domain (IgV). IgV: Imm	97.5
cd04980	106	IgV_L_kappa Immunoglobulin (Ig) light chain, kappa	97.49
cd05880	115	Ig_EVA1 Immunoglobulin (Ig)-like domain of epithel	97.45
cd05886	99	Ig1_Nectin-1_like First immunoglobulin (Ig) domain	97.4
cd04982	116	IgV_TCR_gamma Immunoglobulin (Ig) variable (V) dom	97.4
cd05883	82	Ig2_Necl-2 Second immunoglobulin (Ig)-like domain	97.39
cd05887	96	Ig1_Nectin-3_like First immunoglobulin (Ig) domain	97.37
cd05775	97	Ig_SLAM-CD84_like_N N-terminal immunoglobulin (Ig)	97.37
cd05715	116	Ig_P0-like Immunoglobulin (Ig)-like domain of Prot	97.33
KOG4367|consensus	699		97.31
cd05888	100	Ig1_Nectin-4_like Frst immunoglobulin (Ig) domain	97.27
KOG0613|consensus	1205		97.24
KOG4367|consensus	699		97.18
cd05761	82	Ig2_Necl-1-4_like Second immunoglobulin (Ig)-like	97.18
cd05901	117	Ig_Versican Immunoglobulin (Ig)-like domain of the	97.12
cd05902	110	Ig_Neurocan Immunoglobulin (Ig)-like domain of the	97.12
PF07686	114	V-set: Immunoglobulin V-set domain; InterPro: IPR0	97.09
cd07706	116	IgV_TCR_delta Immunoglobulin (Ig) variable (V) dom	97.09
cd05755	100	Ig2_ICAM-1_like Second immunoglobulin (Ig)-like do	97.08
cd04984	98	IgV_L_lambda Immunoglobulin (Ig) lambda light chai	97.07
KOG3632|consensus	1335		97.07
cd05846	97	Ig1_MRC-OX-2_like First immunoglobulin (Ig) domain	97.04
cd00098	95	IgC Immunoglobulin Constant domain. IgC: Immunoglo	97.02
KOG4152|consensus	830		97.0
cd07705	83	Ig2_Necl-1 Second immunoglobulin (Ig)-like domain	97.0
cd05711	94	Ig_FcalphaRI Immunoglobulin (IG)-like domain of of	96.96
cd07694	88	Ig2_CD4 Second immunoglobulin (Ig) domain of CD4.	96.92
KOG0613|consensus	1205		96.91
KOG3515|consensus	741		96.89
KOG4228|consensus	1087		96.76
cd05884	83	Ig2_Necl-3 Second immunoglobulin (Ig)-like domain	96.75
cd05716	98	Ig_pIgR Immunoglobulin (Ig)-like domain in the pol	96.69
cd07698	93	IgC_MHC_I_alpha3 Class I major histocompatibility	96.62
cd05771	139	IgC_Tapasin_R Tapasin-R immunoglobulin-like domain	96.57
cd05712	119	Ig_Siglec_N Immunoglobulin (Ig) domain at the N te	96.54
KOG4806|consensus	454		96.52
KOG4152|consensus	830		96.5
PF09294	106	Interfer-bind: Interferon-alpha/beta receptor, fib	96.5
PF09294	106	Interfer-bind: Interferon-alpha/beta receptor, fib	96.49
cd07700	107	IgV_CD8_beta Immunoglobulin (Ig) like domain of CD	96.41
TIGR00864	2740	PCC polycystin cation channel protein. Note: this	96.27
COG4733	952	Phage-related protein, tail component [Function un	96.27
cd07699	100	IgC_L Immunoglobulin Constant domain. IgC_L: Immun	96.25
cd05889	96	Ig1_DNAM-1_like First immunoglobulin (Ig) domain o	96.24
cd00096	74	Ig Immunoglobulin domain. Ig: immunoglobulin (Ig)	96.22
cd05735	88	Ig8_DSCAM Eight immunoglobulin (Ig) domain of Down	96.22
PHA03376	221	BARF1; Provisional	96.11
cd05767	94	IgC_MHC_II_alpha Class II major histocompatibility	95.99
PF01108	107	Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH	95.98
PF08205	89	C2-set_2: CD80-like C2-set immunoglobulin domain ;	95.94
cd05720	104	Ig_CD8_alpha Immunoglobulin (Ig) like domain of CD	95.92
KOG4806|consensus	454		95.9
cd05766	94	IgC_MHC_II_beta Class II major histocompatibility	95.9
PF01108	107	Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH	95.88
cd05770	93	IgC_beta2m Class I major histocompatibility comple	95.83
cd05719	95	Ig2_PVR_like Second immunoglobulin (Ig) domain of	95.71
cd05772	111	IgC_SIRP Signal-regulatory protein (SIRP) immunogl	95.59
cd05762	98	Ig8_MLCK Eighth immunoglobulin (Ig)-like domain of	95.56
cd07692	65	Ig_CD3_epsilon Immunoglobulin (Ig)-like domain of	95.37
cd04981	117	IgV_H Immunoglobulin (Ig) heavy chain (H), variabl	95.31
smart00407	75	IGc1 Immunoglobulin C-Type.	95.19
cd07703	95	Ig2_Nectin-2_like Second immunoglobulin (Ig) domai	95.12
cd05847	94	IgC_CH2_IgE CH2 domain (second constant Ig domain	94.82
cd07696	96	IgC_CH3 CH3 domain (third constant Ig domain of th	94.81
cd05851	88	Ig3_Contactin-1 Third Ig domain of contactin-1. Ig	94.63
cd07704	97	Ig2_Nectin-3-4_like Second immunoglobulin (Ig) dom	94.58
cd05748	74	Ig_Titin_like Immunoglobulin (Ig)-like domain of t	94.47
cd05894	86	Ig_C5_MyBP-C C5 immunoglobulin (Ig) domain of card	94.36
cd05769	115	IgC_TCR_beta T cell receptor (TCR) beta chain cons	94.34
cd05768	102	IgC_CH4 CH4 domain (fourth constant Ig domain of t	94.2
cd07691	69	Ig_CD3_gamma_delta Immunoglobulin (Ig)-like domain	94.19
PF07654	83	C1-set: Immunoglobulin C1-set domain; InterPro: IP	94.14
cd04986	99	IgC_CH2 CH2 domain (second constant Ig domain of t	94.11
cd05747	92	Ig5_Titin_like M5, fifth immunoglobulin (Ig)-like	93.99
cd04972	90	Ig_TrkABC_d4 Fourth domain (immunoglobulin-like) o	93.95
cd05893	75	Ig_Palladin_C C-terminal immunoglobulin (Ig)-like	93.93
smart00406	81	IGv Immunoglobulin V-Type.	93.91
COG4733	952	Phage-related protein, tail component [Function un	93.9
cd05854	85	Ig6_Contactin-2 Sixth Ig domain of contactin-2. Ig	93.83
cd04968	88	Ig3_Contactin_like Third Ig domain of contactin. I	93.78
cd05743	78	Ig_Perlecan_D2_like Immunoglobulin (Ig)-like domai	93.77
cd05892	75	Ig_Myotilin_C C-terminal immunoglobulin (Ig)-like	93.71
cd05866	92	Ig1_NCAM-2 First immunoglobulin (Ig)-like domain o	93.49
cd07697	96	IgC_TCR_gamma T cell receptor (TCR) gamma chain co	93.42
cd05870	98	Ig5_NCAM-2 Fifth immunoglobulin (Ig)-like domain o	93.33
cd05730	95	Ig3_NCAM-1_like Third immunoglobulin (Ig)-like dom	93.22
cd05853	85	Ig6_Contactin-4 Sixth Ig domain of contactin-4. Ig	92.93
cd05760	77	Ig2_PTK7 Second immunoglobulin (Ig)-like domain of	92.85
cd05773	109	Ig8_hNephrin_like Eighth immunoglobulin-like domai	92.84
cd05744	75	Ig_Myotilin_C_like Immunoglobulin (Ig)-like domain	92.77
cd05852	73	Ig5_Contactin-1 Fifth Ig domain of contactin-1. Ig	92.66
cd05742	84	Ig1_VEGFR_like First immunoglobulin (Ig)-like doma	92.54
cd05725	69	Ig3_Robo Third immunoglobulin (Ig)-like domain in	92.5
cd05876	71	Ig3_L1-CAM Third immunoglobulin (Ig)-like domain o	92.3
TIGR00868	863	hCaCC calcium-activated chloride channel protein 1	92.19
cd04971	81	Ig_TrKABC_d5 Fifth domain (immunoglobulin-like) of	92.01
cd05736	76	Ig2_Follistatin_like Second immunoglobulin (Ig)-li	91.95
cd05867	76	Ig4_L1-CAM_like Fourth immunoglobulin (Ig)-like do	91.81
cd05868	76	Ig4_NrCAM Fourth immunoglobulin (Ig)-like domain o	91.79
cd04985	95	IgC_CH1 CH1 domain (first constant Ig domain of th	91.73
cd05750	75	Ig_Pro_neuregulin Immunoglobulin (Ig)-like domain	91.64
cd05737	92	Ig_Myomesin_like_C C-temrinal immunoglobulin (Ig)-	91.64
cd04970	85	Ig6_Contactin_like Sixth Ig domain of contactin. I	91.53
cd05863	67	Ig2_VEGFR-3 Second immunoglobulin (Ig)-like domain	91.44
cd05763	75	Ig_1 Subgroup of the immunoglobulin (Ig) superfami	91.35
cd05732	96	Ig5_NCAM-1_like Fifth immunoglobulin (Ig)-like dom	91.34
cd05721	115	IgV_CTLA-4 Immunoglobulin (Ig) domain of cytotoxic	91.32
cd05723	71	Ig4_Neogenin Fourth immunoglobulin (Ig)-like domai	91.22
cd04973	79	Ig1_FGFR First immunoglobulin (Ig)-like domain of	91.22
cd05745	74	Ig3_Peroxidasin Third immunoglobulin (Ig)-like dom	91.09
cd05891	92	Ig_M-protein_C C-terminal immunoglobulin (Ig)-like	90.89
cd05726	90	Ig4_Robo Fhird immunoglobulin (Ig)-like domain in	90.72
cd04978	76	Ig4_L1-NrCAM_like Fourth immunoglobulin (Ig)-like	90.64
cd05865	96	Ig1_NCAM-1 First immunoglobulin (Ig)-like domain o	90.59
cd05869	97	Ig5_NCAM-1 Fifth immunoglobulin (Ig)-like domain o	90.54
PF07495	66	Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi	90.51
PF07354	271	Sp38: Zona-pellucida-binding protein (Sp38); Inter	90.31
cd05740	91	Ig_CEACAM_D4 Fourth immunoglobulin (Ig)-like domai	90.28
cd05895	76	Ig_Pro_neuregulin-1 Immunoglobulin (Ig)-like domai	90.18
PF09067	104	EpoR_lig-bind: Erythropoietin receptor, ligand bin	90.12
PF09067	104	EpoR_lig-bind: Erythropoietin receptor, ligand bin	90.02
cd05731	71	Ig3_L1-CAM_like Third immunoglobulin (Ig)-like dom	89.95
cd05746	69	Ig4_Peroxidasin Fourth immunoglobulin (Ig)-like do	89.29
cd04975	101	Ig4_SCFR_like Fourth immunoglobulin (Ig)-like doma	89.18
cd05855	79	Ig_TrkB_d5 Fifth domain (immunoglobulin-like) of T	89.08
cd05738	74	Ig2_RPTP_IIa_LAR_like Second immunoglobulin (Ig)-l	89.02
cd05857	85	Ig2_FGFR Second immunoglobulin (Ig)-like domain of	88.91
cd05850	94	Ig1_Contactin-2 First Ig domain of contactin-2. Ig	88.74
cd04969	73	Ig5_Contactin_like Fifth Ig domain of contactin. I	88.74
PF07679	90	I-set: Immunoglobulin I-set domain; InterPro: IPR0	88.65
cd05728	85	Ig4_Contactin-2-like Fourth Ig domain of the neura	88.51
cd05858	90	Ig3_FGFR-2 Third immunoglobulin (Ig)-like domain o	88.39
cd07689	99	Ig2_VCAM-1 Second immunoglobulin (Ig)-like domain	87.96
cd05764	74	Ig_2 Subgroup of the immunoglobulin (Ig) superfami	87.85
cd04974	90	Ig3_FGFR Third immunoglobulin (Ig)-like domain of	87.84
PHA02633	63	hypothetical protein; Provisional	87.82
cd05862	86	Ig1_VEGFR First immunoglobulin (Ig)-like domain of	87.8
KOG4597|consensus	560		87.77
cd05864	70	Ig2_VEGFR-2 Second immunoglobulin (Ig)-like domain	87.71
cd05848	94	Ig1_Contactin-5 First Ig domain of contactin-5. Ig	87.61
cd05856	82	Ig2_FGFRL1-like Second immunoglobulin (Ig)-like do	87.58
cd05733	77	Ig6_L1-CAM_like Sixth immunoglobulin (Ig)-like dom	87.26
PF08204	130	V-set_CD47: CD47 immunoglobulin-like domain; Inter	87.13
cd05861	84	Ig1_PDGFR-alphabeta Frst immunoglobulin (Ig)-like	86.93
KOG1948|consensus	1165		86.82
cd05859	101	Ig4_PDGFR-alpha Fourth immunoglobulin (Ig)-like do	86.78
cd05751	91	Ig1_LILRB1_like First immunoglobulin (Ig)-like dom	86.64
cd04977	92	Ig1_NCAM-1_like First immunoglobulin (Ig)-like dom	86.53
cd05765	81	Ig_3 Subgroup of the immunoglobulin (Ig) superfami	86.44
cd04976	71	Ig2_VEGFR Second immunoglobulin (Ig)-like domain o	86.23
cd05724	86	Ig2_Robo Second immunoglobulin (Ig)-like domain in	86.17
cd05754	85	Ig3_Perlecan_like Third immunoglobulin (Ig)-like d	86.11
cd05849	93	Ig1_Contactin-1 First Ig domain of contactin-1. Ig	85.25
PLN02533	427	probable purple acid phosphatase	84.97
TIGR00868	863	hCaCC calcium-activated chloride channel protein 1	84.58
PF07495	66	Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi	84.47
PF09240	99	IL6Ra-bind: Interleukin-6 receptor alpha chain, bi	84.21
PF09240	99	IL6Ra-bind: Interleukin-6 receptor alpha chain, bi	83.97
KOG1225|consensus	525		83.6
cd05739	69	Ig3_RPTP_IIa_LAR_like Third immunoglobulin (Ig)-li	83.55
cd05734	79	Ig7_DSCAM Seventh immunoglobulin (Ig)-like domain	83.47
PLN02533	427	probable purple acid phosphatase	82.86
KOG1480|consensus	909		82.71
PHA02865	338	MHC-like TNF binding protein; Provisional	81.45
cd05874	77	Ig6_NrCAM Sixth immunoglobulin (Ig)-like domain of	81.42
cd05758	98	Ig5_KIRREL3-like Fifth immunoglobulin (Ig)-like do	81.37
PHA02982	251	hypothetical protein; Provisional	81.29
cd05749	81	Ig2_Tyro3_like Second immunoglobulin (Ig)-like dom	80.94
PHA03042	286	CD47-like protein; Provisional	80.84
cd04967	91	Ig1_Contactin First Ig domain of contactin. Ig1_Co	80.15

>KOG4221|consensus

Probab=100.00  E-value=2.2e-61  Score=522.32  Aligned_cols=818  Identities=22%  Similarity=0.298  Sum_probs=593.7

Q ss_pred             CcceeeeccceEEEEe--------cCCCCCcceeeEeeCCCCCCCCcEEEeccCCceEEEEeCCCC-----------CCC
Q psy8771           2 DTRCYVESPEEVFIIL--------CPLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPET-----------PNG   62 (904)
Q Consensus         2 ~~~~~~~~~~~~~~~~--------~~~~p~~~~~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~-----------~~g   62 (904)
                      .|||.+... ++-.|+        ..+++--++.+..+.-.+.+.-+.|..-.++...|.|.+...           ++|
T Consensus       115 ~Yqc~atv~-~~gsi~Sr~a~v~~a~~~~f~~~~~~~t~~~g~ta~f~c~vn~e~~p~i~w~kn~~pl~~~~r~i~lpsG  193 (1381)
T KOG4221|consen  115 VYQCLATVE-DVGSILSRTAKVALAGLADFALQPESTTLLYGQTALFSCEVNAEPVPTIMWLKNDQPLPLDSRVIVLPSG  193 (1381)
T ss_pred             eEEEEEEcc-ccceeecceEEEEecccCccccCccceeEecCCcEEEEEEEcCccCceeEEecccccccCCCcEEEcCCC
Confidence            489999887 333333        335555556555555555788888888888888999987754           266


Q ss_pred             ceecccccccccc-eEEEEeeeccCCeeeeeeeecc-CCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEe
Q psy8771          63 QITHPPTRAARSH-ARLAAQSVLRRGRLAHAVRQVA-DPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWR  140 (904)
Q Consensus        63 ~i~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~v~-~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~  140 (904)
                      .+....+.+.+.+ .++++..+...+...++.+.+. ++....--.|...|.+ .++.+|+++.|+|.+.|.|+|.|.|.
T Consensus       194 ~L~I~~~qp~d~g~yrc~vt~g~~~r~S~~a~ltv~s~~~~~~~~~fl~~p~~-~~v~~g~~v~leCvvs~~p~p~v~Wl  272 (1381)
T KOG4221|consen  194 ALEISGLQPSDTGEYRCVVTGGASQRTSNEAELTVLSDPGALNKLVFLDEPSN-AVVVEGDDVVLECVVSGVPKPSVKWL  272 (1381)
T ss_pred             cEEecccccCCCceEEEEEecCCcCCccceeEEEecCCcccccceeeecCCCc-cccccCCcEEEEEEecCCCCCceEEe
Confidence            6666666666433 3444444444444445555554 3323333337888888 99999999999999999999999999


Q ss_pred             eCCccccC-CCCceee-cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCe
Q psy8771         141 KGQNIELT-PDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATS  216 (904)
Q Consensus       141 k~~~~~~~-~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~s  216 (904)
                      || +..+. ++.|+.. ..++|.|.++  .|+|.|+|+|.|......+++.|.|+.+    ...+..|.++...+    +
T Consensus       273 rn-g~~i~~ds~rivl~g~~slliS~a~~~dSg~YtC~Atn~~D~idasaev~V~a~----P~~~~~p~~l~A~e----~  343 (1381)
T KOG4221|consen  273 RN-GEKISVDSYRIVLVGGSSLLISNATDDDSGKYTCRATNTNDSIDASAEVTVLAP----PGFTKAPTTLVAHE----S  343 (1381)
T ss_pred             eC-CeeeeecceEEEEecccceEEeccccccCceEEEEecCCCcccccceEEEEEcC----CCCCCCCcceeeee----c
Confidence            99 66554 3445543 6889999999  5899999999998888899999999922    23344666665433    6


Q ss_pred             EEEEEeCC--CccceEEEEEEEeCC-CCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCC-
Q psy8771         217 VRLDWTYP--SETLLYYVIQYKPKA-ANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET-  292 (904)
Q Consensus       217 v~l~W~~~--~~~~~~y~v~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~-  292 (904)
                      ..++|+.+  +.++..|++....+- ....+..+.+.. . +.|.++-..++..|+|.|.|+.|....+..+.+...+. 
T Consensus       344 ~die~ec~~~g~p~p~v~w~kNgd~~ipsdy~ki~~~~-~-lrIlgi~~sdeg~yQcvaen~~G~a~a~a~l~vv~~p~~  421 (1381)
T KOG4221|consen  344 MDIEFECPVSGKPIPTVRWYKNGDRIIPSDYFKIVGGG-N-LRILGIVKSDEGFYQCVAENDAGSAQAAAQLEVVPQPAS  421 (1381)
T ss_pred             cceeEeCCCCCCCcceEEEEecCcccCcccceEecCCC-C-cEEEEEecccchhhhhhhccCcccccchhhheeccCCcc
Confidence            67888877  555665554433210 012333343332 2 78888888888888999999999876665554443322 


Q ss_pred             ----CCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEeec-------------eeEEEEEcCCCCCcEEEEEEE
Q psy8771         293 ----EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIG-------------LVETYSLTGLYPNTLYYIWLA  355 (904)
Q Consensus       293 ----~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~~-------------~~~~~~~~~L~~~~~Y~v~v~  355 (904)
                          .-+..|..+.+...+.+.+.++|.+|...++.+..|.+....             ......+..|.+.+.|.|+|.
T Consensus       422 ~~s~~~~sap~~lv~~~~~srfi~~tw~~p~~~~g~i~~~~v~~~~~~~~rer~~~tss~g~~~tv~nl~p~t~Y~~rv~  501 (1381)
T KOG4221|consen  422 ASSDLLPSAPRDLVANLVSSRFIQLTWRPPAQISGNISTYTVFYKVEGDVRERLQNTSSPGIQVTVQNLSPLTMYFFRVR  501 (1381)
T ss_pred             cccCccccCCcceecccccceeEEEeecCccccCCCcceEEEEEecCCchhhhheeccCCceEEEeeecccceeEEEEEe
Confidence                224678899999999999999999888777777776543321             114678899999999999999


Q ss_pred             EEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEecc------ccCcEEEEEEeeecCCCCCCCCCCc
Q psy8771         356 AQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGL------YPNTLYYIWLAAQSPRGEGATTPPI  429 (904)
Q Consensus       356 a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~y~~~~~~~~~~g~~~~~~~~  429 (904)
                      |.|..|.+.++.++.+.+...++.. +....       .......+.+-      .+...|.+.+.-.+.          
T Consensus       502 A~n~~g~g~sS~pLkV~t~pEgp~~-~~a~a-------ts~~ti~v~WepP~~~n~~I~~yk~~ys~~~~----------  563 (1381)
T KOG4221|consen  502 AKNEAGSGESSAPLKVTTQPEGPVQ-LQAYA-------TSPTTILVTWEPPPFGNGPITGYKLFYSEDDT----------  563 (1381)
T ss_pred             ccCcccCCccCCceEEecCCCCCcc-ccccc-------cCcceEEEEecCCCCCCCCceEEEEEEEcCCC----------
Confidence            9999999999999999987653222 11000       00111111111      233455555443211          


Q ss_pred             ceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCC--C
Q psy8771         430 PVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE--T  507 (904)
Q Consensus       430 ~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~--~  507 (904)
                      ...........+++|.||++.|+|.|+|.|+|..|.|..|..+.+.|..+.|..||.||++...++++|+|+|.+|.  .
T Consensus       564 ~~~~~~~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t  643 (1381)
T KOG4221|consen  564 GKELRVENNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTLSDVPSAPPQNLSLEVVSSTSVRVSWLPPPSET  643 (1381)
T ss_pred             CceEEEecCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEeccCCCCCCCcceEEEecCCCeEEEEccCCCccc
Confidence            11333445678899999999999999999999999999999999999999999999999999999999999999964  3


Q ss_pred             CCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCC-----CCC
Q psy8771         508 PNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGV-----PSQ  582 (904)
Q Consensus       508 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~-----p~~  582 (904)
                      .+|.+.+|+|+|+.........|. ...++.+.+.+.+|+|++.|.|+|.|.+..|.|+.|++..+.|+...     |.+
T Consensus       644 ~ng~itgYkIRy~~~~~~~~~~~t-~v~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~~d~~e~vp~~  722 (1381)
T KOG4221|consen  644 QNGQITGYKIRYRKLSREDEVNET-VVKGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPESDLDERVPGK  722 (1381)
T ss_pred             ccceEEEEEEEecccCccccccee-ecccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccCccccccccCCCC
Confidence            568999999999977644333332 22247788999999999999999999999999999999999987643     334


Q ss_pred             CCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCC
Q psy8771         583 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY  662 (904)
Q Consensus       583 p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~  662 (904)
                      |..|.+.. ..++|.++|.++.+                                         .+-.+.+|+|.|+...
T Consensus       723 ps~l~~~~-g~~si~vsW~Pp~~-----------------------------------------~~~~vrgY~ig~r~g~  760 (1381)
T KOG4221|consen  723 PSELHVHP-GSNSIVVSWTPPPH-----------------------------------------PNIVVRGYKIGYRPGS  760 (1381)
T ss_pred             Cceeeecc-CceeEEEEeCCCCC-----------------------------------------hhhhhcceEEeeeccc
Confidence            55555544 67789999999876                                         4456778888885443


Q ss_pred             ccc--cceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCC-CeeEEecCC------CCCCCCCCcEEEecCCCEE
Q psy8771         663 AKA--KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTP-PIPVRTKQY------VPGAPPQNVSCEPLSSTSI  733 (904)
Q Consensus       663 ~~~--~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~-~~~~~t~~~------~p~~~P~~l~~~~~~~~~v  733 (904)
                      +..  ...........|.|..|.++..|.|+++|+|..|.|.+.. .+.+++...      .|..+|..+++...+.++|
T Consensus       761 ~~p~~~tIrl~~~~s~y~l~~Le~~~~YvVkL~AfNn~gdG~p~y~~~~tR~~~~~~~~v~tp~~ppvgv~A~~~S~tsI  840 (1381)
T KOG4221|consen  761 GIPDTGTIRLDEKVSYYNLEQLEPNRDYVVKLRAFNNHGDGNPIYESVKTRSATDPTSPVDTPMLPPVGVRANALSSTSI  840 (1381)
T ss_pred             CCCCCccEEecceeeEEEEEecccCceEEEEEEEeccCCCCcceeeeeeeccCCCcCCcCCCCCCCcccccccccccceE
Confidence            332  2445556678999999999999999999999999997642 233332111      2555778888888999999


Q ss_pred             EEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEee-CCCCCCCCCcEEeecC
Q psy8771         734 RISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGT-SIGDGPSSYPITIRTH  812 (904)
Q Consensus       734 ~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~-~~g~g~~s~~~~~~t~  812 (904)
                      .+.|..-. +. -.....|.|.|...+-.....-+.......++.+.+|+|.+.|+|.|.++- ....|.+|..+..+|.
T Consensus       841 ~v~w~~~~-~~-t~~~~~yTVr~~~~gi~~~~~~~~~~~t~ls~~v~glkpnt~yEfav~~~~~~~r~stwsmsv~~~tl  918 (1381)
T KOG4221|consen  841 RVTWADNK-DQ-TTDNRIYTVRWSLTGIRNGTLYRYDNSTDLSYLVGGLKPNTPYEFAVMVVKRNRRESTWSMSVENRTL  918 (1381)
T ss_pred             EEEEecCC-Cc-cccceEEEEEEeecccccceeEEEecccccceeccCcCcCChhhhhhhhhhccCcCCcccceeeeeec
Confidence            99999731 12 335788999998544222222233333888999999999999999999887 4557888999999998


Q ss_pred             CCCCCC------------CccCCcceeeCCCCCceeeeeeeecCC--------ceEEecCCCeeEEEEcCCCCCcEEEEE
Q psy8771         813 EDDPSE------------VCPTQNDFRKNKKTNGSNFKGGYLNDP--------MRFDVSDGGALELNVTGLQPDTIYTIQ  872 (904)
Q Consensus       813 ~~~P~~------------v~~~~~~W~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~L~p~t~Y~~~  872 (904)
                      +..|..            ...+.+.|.+|...||.|..|.+.+..        .......+....+.+.+|.+++.|.|+
T Consensus       919 e~~P~sPP~d~tv~p~e~P~~v~v~WqPp~e~nG~I~~Yii~Ys~~~n~~~~dWt~~t~~g~~L~~~v~~l~p~t~yffk  998 (1381)
T KOG4221|consen  919 ELVPSSPPRDLTVQPDEKPTTVIVHWQPPTEPNGEITEYIIYYSTDGNTPEHDWTIETTAGAELSHQVPNLDPDTGYFFK  998 (1381)
T ss_pred             ccCCCCCChhceecccCCCCccccccCCCcCCCCceeeEEEEEecCCCCchhhceeeecccchhhhccCCCCCCCceEEE
Confidence            876632            122334999999999998876654321        112235677889999999999999999


Q ss_pred             EEEEecCCCCCCCCceEEecCCC
Q psy8771         873 VAALTRKGDGDRSKPETIKTPGG  895 (904)
Q Consensus       873 v~a~n~~G~g~~s~~~~~~t~~~  895 (904)
                      |+|.|..|.|+.|..+.+.|...
T Consensus       999 iQAr~~kG~gp~s~~v~y~t~~~ 1021 (1381)
T KOG4221|consen  999 IQARNEKGPGPFSSPVLYETSKA 1021 (1381)
T ss_pred             EEeeccCCCCccccceeeecccc
Confidence            99999999999999999888765

>KOG4221|consensus

Probab=100.00  E-value=2.5e-56  Score=483.26  Aligned_cols=746  Identities=23%  Similarity=0.356  Sum_probs=543.9

Q ss_pred             Ccceeeecc------ceEEEEecCCCCCcceeeEeeCCC------CCCCCcEEEeccCCceEEEEeCCCCC---------
Q psy8771           2 DTRCYVESP------EEVFIILCPLPPLIPGYILVTEPG------TAPRDVQVRPLSSSTMVIQWDEPETP---------   60 (904)
Q Consensus         2 ~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~~~p~------~~p~~l~~~~~~~~s~~v~W~~~~~~---------   60 (904)
                      -|||+|++.      ++....+-..+=..+..+-...|.      +.+..|.|..-+-+.+.|.|.+....         
T Consensus       207 ~yrc~vt~g~~~r~S~~a~ltv~s~~~~~~~~~fl~~p~~~~v~~g~~v~leCvvs~~p~p~v~Wlrng~~i~~ds~riv  286 (1381)
T KOG4221|consen  207 EYRCVVTGGASQRTSNEAELTVLSDPGALNKLVFLDEPSNAVVVEGDDVVLECVVSGVPKPSVKWLRNGEKISVDSYRIV  286 (1381)
T ss_pred             eEEEEEecCCcCCccceeEEEecCCcccccceeeecCCCccccccCCcEEEEEEecCCCCCceEEeeCCeeeeecceEEE
Confidence            379999875      333333333222223322223332      45677888888999999999986322         


Q ss_pred             ---CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeE
Q psy8771          61 ---NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFV  137 (904)
Q Consensus        61 ---~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i  137 (904)
                         ++.++....+..+.....|..++......+.+.+.|     ..||.|+..|.+ +.+.++.++.|+|.+.|.|.|.+
T Consensus       287 l~g~~slliS~a~~~dSg~YtC~Atn~~D~idasaev~V-----~a~P~~~~~p~~-l~A~e~~die~ec~~~g~p~p~v  360 (1381)
T KOG4221|consen  287 LVGGSSLLISNATDDDSGKYTCRATNTNDSIDASAEVTV-----LAPPGFTKAPTT-LVAHESMDIEFECPVSGKPIPTV  360 (1381)
T ss_pred             EecccceEEeccccccCceEEEEecCCCcccccceEEEE-----EcCCCCCCCCcc-eeeeeccceeEeCCCCCCCcceE
Confidence               223444445555555555655553333344445554     678999999999 99999999999999999999999


Q ss_pred             EEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCC--CCCCCCCCcceEEEee
Q psy8771         138 KWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAP--LLTLPVAPLDVKISEV  212 (904)
Q Consensus       138 ~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~--~~~~P~~p~~l~~~~~  212 (904)
                      .|+|+ |..+..++++++ .++.|+|..+  .|.|.|+|.++|..|...+.+.|.+..+.+.  ..-.|.+|..+.+...
T Consensus       361 ~w~kN-gd~~ipsdy~ki~~~~~lrIlgi~~sdeg~yQcvaen~~G~a~a~a~l~vv~~p~~~~s~~~~sap~~lv~~~~  439 (1381)
T KOG4221|consen  361 RWYKN-GDRIIPSDYFKIVGGGNLRILGIVKSDEGFYQCVAENDAGSAQAAAQLEVVPQPASASSDLLPSAPRDLVANLV  439 (1381)
T ss_pred             EEEec-CcccCcccceEecCCCCcEEEEEecccchhhhhhhccCcccccchhhheeccCCcccccCccccCCcceecccc
Confidence            99999 555555777776 4445888887  7999999999999999999999976622211  1134668888988889


Q ss_pred             cCCeEEEEEeCC---CccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEec
Q psy8771         213 TATSVRLDWTYP---SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT  289 (904)
Q Consensus       213 ~~~sv~l~W~~~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t  289 (904)
                      +...+.|+|..|   ++++..|.+.|........-...........++.+|+|.+.|.|+|.|.|..|.+.++.++.+.+
T Consensus       440 ~srfi~~tw~~p~~~~g~i~~~~v~~~~~~~~rer~~~tss~g~~~tv~nl~p~t~Y~~rv~A~n~~g~g~sS~pLkV~t  519 (1381)
T KOG4221|consen  440 SSRFIQLTWRPPAQISGNISTYTVFYKVEGDVRERLQNTSSPGIQVTVQNLSPLTMYFFRVRAKNEAGSGESSAPLKVTT  519 (1381)
T ss_pred             cceeEEEeecCccccCCCcceEEEEEecCCchhhhheeccCCceEEEeeecccceeEEEEEeccCcccCCccCCceEEec
Confidence            999999999987   78899999999876433222222222227889999999999999999999999999999999887


Q ss_pred             CCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEee-----------ceeEEEEEcCCCCCcEEEEEEEEEc
Q psy8771         290 GETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRI-----------GLVETYSLTGLYPNTLYYIWLAAQS  358 (904)
Q Consensus       290 ~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~~~~~Y~v~v~a~~  358 (904)
                      .+.    +|..+++...+..++.+.|++|...++.+++|.....           .+...|+|.+|.+.+.|.|+|.|.|
T Consensus       520 ~pE----gp~~~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~~~~~~~~~~~n~~e~ti~gL~k~TeY~~~vvA~N  595 (1381)
T KOG4221|consen  520 QPE----GPVQLQAYATSPTTILVTWEPPPFGNGPITGYKLFYSEDDTGKELRVENNATEYTINGLEKYTEYSIRVVAYN  595 (1381)
T ss_pred             CCC----CCccccccccCcceEEEEecCCCCCCCCceEEEEEEEcCCCCceEEEecCccEEEeecCCCccceEEEEEEec
Confidence            654    3444999999999999999999999999998754332           2345799999999999999999999


Q ss_pred             CCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccC--------cEEEEEEeeecCCCCCCCCCCcc
Q psy8771         359 PRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPN--------TLYYIWLAAQSPRGEGATTPPIP  430 (904)
Q Consensus       359 ~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~y~~~~~~~~~~g~~~~~~~~~  430 (904)
                      ..|.+..|..+.|+|....+.........    ......+..+....+.        ..|.++.......+...      
T Consensus       596 ~~G~g~sS~~i~V~Tlsd~PsaPP~Nl~l----ev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~------  665 (1381)
T KOG4221|consen  596 SAGSGVSSADITVRTLSDVPSAPPQNLSL----EVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVN------  665 (1381)
T ss_pred             CCCCCCCCCceEEEeccCCCCCCCcceEE----EecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccc------
Confidence            99999999999999986544333321111    1111122233333222        24555555433332211      


Q ss_pred             eEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCC----CCCCCeEEEecCCceEEEEecCCC
Q psy8771         431 VRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPG----TAPRDVQVRPLSSSTMVIQWDEPE  506 (904)
Q Consensus       431 ~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~----~~p~~l~v~~~~~~~~~l~W~~p~  506 (904)
                       ..-..+....+.+.+|+|++.|.|+|.|.+..|.|+.|.+..+.|....+.    .+|..|.+. ...++|.++|.||.
T Consensus       666 -~t~v~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~~d~~e~vp~~ps~l~~~-~g~~si~vsW~Pp~  743 (1381)
T KOG4221|consen  666 -ETVVKGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPESDLDERVPGKPSELHVH-PGSNSIVVSWTPPP  743 (1381)
T ss_pred             -eeecccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccCccccccccCCCCCceeeec-cCceeEEEEeCCCC
Confidence             112223566678899999999999999999999999999999888654332    355555543 45689999999998


Q ss_pred             CCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCc-EEEecCCC-------
Q psy8771         507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAP-VLVKTQQG-------  578 (904)
Q Consensus       507 ~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~-~~~~t~~~-------  578 (904)
                      +.+-.+.+|+|.|+.....+. .-........+.|.|..|+++..|.++++|+|..|.|..... ..++....       
T Consensus       744 ~~~~~vrgY~ig~r~g~~~p~-~~tIrl~~~~s~y~l~~Le~~~~YvVkL~AfNn~gdG~p~y~~~~tR~~~~~~~~v~t  822 (1381)
T KOG4221|consen  744 HPNIVVRGYKIGYRPGSGIPD-TGTIRLDEKVSYYNLEQLEPNRDYVVKLRAFNNHGDGNPIYESVKTRSATDPTSPVDT  822 (1381)
T ss_pred             ChhhhhcceEEeeecccCCCC-CccEEecceeeEEEEEecccCceEEEEEEEeccCCCCcceeeeeeeccCCCcCCcCCC
Confidence            877789999999976544331 122344466788999999999999999999999999865432 33332211       


Q ss_pred             CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEE
Q psy8771         579 VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW  658 (904)
Q Consensus       579 ~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~  658 (904)
                      +..+|..++....+.++|.+.|..-.+                                         .-.....|.|+|
T Consensus       823 p~~ppvgv~A~~~S~tsI~v~w~~~~~-----------------------------------------~t~~~~~yTVr~  861 (1381)
T KOG4221|consen  823 PMLPPVGVRANALSSTSIRVTWADNKD-----------------------------------------QTTDNRIYTVRW  861 (1381)
T ss_pred             CCCCcccccccccccceEEEEEecCCC-----------------------------------------ccccceEEEEEE
Confidence            223556677777777888888876321                                         112456777777


Q ss_pred             EeCCcc--ccceEEecccceEEEeCCCCCcEEEEEEEEEc-CCCCCCCCCCeeEEecCCCCCCCCCCcEEEecC-CCEEE
Q psy8771         659 NDTYAK--AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQS-PRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLS-STSIR  734 (904)
Q Consensus       659 ~~~~~~--~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~-~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~-~~~v~  734 (904)
                      ...+-.  ...........++.+.+|+|++.|+|-|.++- ..-.|.+|..+..+|.+.+|..||.++.+.... ++++.
T Consensus       862 ~~~gi~~~~~~~~~~~t~ls~~v~glkpnt~yEfav~~~~~~~r~stwsmsv~~~tle~~P~sPP~d~tv~p~e~P~~v~  941 (1381)
T KOG4221|consen  862 SLTGIRNGTLYRYDNSTDLSYLVGGLKPNTPYEFAVMVVKRNRRESTWSMSVENRTLELVPSSPPRDLTVQPDEKPTTVI  941 (1381)
T ss_pred             eecccccceeEEEecccccceeccCcCcCChhhhhhhhhhccCcCCcccceeeeeecccCCCCCChhceecccCCCCccc
Confidence            633222  22223344567899999999999999999988 444577888899999999999999999997554 79999


Q ss_pred             EEecCCCCCCCCccEEEEEEEEEEccCCC-CccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecC
Q psy8771         735 ISWEPPPVERSNGHIVYYKLQFVETGRSD-SEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTH  812 (904)
Q Consensus       735 l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~  812 (904)
                      +.|.+|  .+.||.|+.|.|+|....... ..+...... +...+.+.+|.+++.|.|+|+|.+..|.|++|.++.++|.
T Consensus       942 v~WqPp--~e~nG~I~~Yii~Ys~~~n~~~~dWt~~t~~g~~L~~~v~~l~p~t~yffkiQAr~~kG~gp~s~~v~y~t~ 1019 (1381)
T KOG4221|consen  942 VHWQPP--TEPNGEITEYIIYYSTDGNTPEHDWTIETTAGAELSHQVPNLDPDTGYFFKIQARNEKGPGPFSSPVLYETS 1019 (1381)
T ss_pred             cccCCC--cCCCCceeeEEEEEecCCCCchhhceeeecccchhhhccCCCCCCCceEEEEEeeccCCCCccccceeeecc
Confidence            999999  689999999999999876432 233444454 8888999999999999999999999999999999988876


Q ss_pred             CC
Q psy8771         813 ED  814 (904)
Q Consensus       813 ~~  814 (904)
                      ..
T Consensus      1020 ~~ 1021 (1381)
T KOG4221|consen 1020 KA 1021 (1381)
T ss_pred             cc
Confidence            44

>KOG3513|consensus

Probab=100.00  E-value=2.3e-54  Score=472.89  Aligned_cols=739  Identities=22%  Similarity=0.310  Sum_probs=507.9

Q ss_pred             CcceeeeccceEEEEecCCCCCcc--------------eeeE--eeCCCCCCCCcEEEeccCCceEEEEeCCCCC-----
Q psy8771           2 DTRCYVESPEEVFIILCPLPPLIP--------------GYIL--VTEPGTAPRDVQVRPLSSSTMVIQWDEPETP-----   60 (904)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~p~~~--------------~~~~--~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~~-----   60 (904)
                      +|.|.+.++.+..+++-+.-|.+.              ....  ..+-.+....|.|-..+.+.++|.|.+....     
T Consensus       207 ~Y~C~a~~~~~~~~v~~~~~~L~~~~~~~~~~~~P~i~~~~p~~~~a~~G~~v~LECfA~G~P~P~i~W~k~~g~~~~~r  286 (1051)
T KOG3513|consen  207 NYICSATFPSTQTIVQGPPFPLIVRSNNVMREYAPKILVPFPETETALKGQSVKLECFALGNPTPQIKWRKVDGKPPPRR  286 (1051)
T ss_pred             ceEEEEEchhhcccccCCceeEEEcccccccccCCccccCCCCcccccCCCeEEEEEEecCCCCCcEEEEeCCCCCCCcc
Confidence            789999999998888777444331              1111  1111246677889999999999999988652     


Q ss_pred             -----CCceec-ccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCC
Q psy8771          61 -----NGQITH-PPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPM  134 (904)
Q Consensus        61 -----~g~i~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~  134 (904)
                           -|.++. -.....|.....|...+..+-......+.+     ..+|.|+..+++ ..+..|+++.|+|.|.|.|.
T Consensus       287 ~~~~~~~~vL~I~nv~~~D~G~Y~C~AeN~~G~~~~~~~v~v-----~a~P~w~~~~~d-~~~~~gs~v~~eC~a~g~P~  360 (1051)
T KOG3513|consen  287 ATYSNYGKVLKIPNVQYEDAGEYECIAENSRGSATHSGHVTV-----YAPPYWLQKPQD-TEADTGSNVTLECKASGKPN  360 (1051)
T ss_pred             eeeeccccEEEecccCcCCCeEEEEEEecccccceeeEEEEE-----ecCchhhcccce-eEecCCCCeEEEEEecCCCC
Confidence                 122221 112222444444555554443333444443     789999999999 99999999999999999999


Q ss_pred             CeEEEeeCCccccCCCCc---eeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEE
Q psy8771         135 PFVKWRKGQNIELTPDDK---LPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKI  209 (904)
Q Consensus       135 p~i~W~k~~~~~~~~~~~---~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~  209 (904)
                      |.|+|+|| |..+....|   +.+.++.|.|.+|  +|+|+|+|.|.|.+|...+++.|.|..   ..+..+..|.+-.+
T Consensus       361 p~v~WlkN-g~pl~~~~r~~~~~i~~g~L~is~v~~~dsg~YQC~A~Nk~G~i~anA~L~V~a---~~P~f~~~p~~~~~  436 (1051)
T KOG3513|consen  361 PTVKWLKN-GEPLEPAERDPRYKIDDGTLIISNVQESDSGVYQCIAENKYGTIYANAELKVLA---SAPVFPLNPVERKV  436 (1051)
T ss_pred             CceEEeeC-CeecCccCCCcceEEeCCEEEEEecccccCeEEEeeeecccceEeeeeEEEEEc---cCCCCCCCccceEE
Confidence            99999999 888877666   8899999999999  699999999999999999999999992   12233334444445


Q ss_pred             EeecCCeEEEEEeCCCccceEEEEEEEeCCCC-CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771         210 SEVTATSVRLDWTYPSETLLYYVIQYKPKAAN-TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT  288 (904)
Q Consensus       210 ~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~  288 (904)
                      ..+-...+.|.+++.+++-.  .+.|...+.. ..-.......+..|.|.+++..+.+.|+|.|.|..|.......+.+.
T Consensus       437 ~a~~g~~v~i~C~~~asP~p--~~~W~k~~~~~~~~~r~~i~edGtL~I~n~t~~DaG~YtC~A~N~~G~a~~~~~L~Vk  514 (1051)
T KOG3513|consen  437 MAVVGGTVTIDCKPFASPKP--KVSWLKGGEKLLQSGRIRILEDGTLEISNVTRSDAGKYTCVAENKLGKAESTGNLIVK  514 (1051)
T ss_pred             EEEeCCeEEEeeccCCCCcc--eEEEEcCCcccccCceEEECCCCcEEecccCcccCcEEEEEEEcccCccceEEEEEEe
Confidence            55667788888887755544  4556554331 01111222345789999999999999999999999987644444443


Q ss_pred             cCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCC
Q psy8771         289 TGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP  368 (904)
Q Consensus       289 t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~  368 (904)
                      -... ...+|.+..+..  ..++.|.++...++.-.+...- ...+    ..+.-...+..|..                
T Consensus       515 d~tr-i~~~P~~~~v~~--g~~v~l~Ce~shD~~ld~~f~W-~~nG----~~id~~~~~~~~~~----------------  570 (1051)
T KOG3513|consen  515 DATR-ITLAPSNTDVKV--GESVTLTCEASHDPSLDITFTW-KKNG----RPIDFNPDGDHFEI----------------  570 (1051)
T ss_pred             cCce-EEeccchhhhcc--CceEEEEeecccCCCcceEEEE-EECC----EEhhccCCCCceEE----------------
Confidence            2211 112333333222  3456666665433322221100 0000    00000011111110                


Q ss_pred             cceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeecc
Q psy8771         369 IPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALY  448 (904)
Q Consensus       369 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~  448 (904)
                                                       .+...                              .......-..|+
T Consensus       571 ---------------------------------~~~~~------------------------------~g~L~i~nv~l~  587 (1051)
T KOG3513|consen  571 ---------------------------------NDGSD------------------------------SGRLTIANVSLE  587 (1051)
T ss_pred             ---------------------------------eCCcC------------------------------ccceEEEeeccc
Confidence                                             00000                              000111224577


Q ss_pred             CCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCc
Q psy8771         449 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMS  528 (904)
Q Consensus       449 p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~  528 (904)
                      ....|.+.+.+..+.-.+  ...+.++    .||.||.+|.+...+.++++|+|.+..+++++|..|.|+.+..-.   .
T Consensus       588 ~~G~Y~C~aqT~~Ds~s~--~A~l~V~----gpPgpP~~v~~~~i~~t~~~lsW~~g~dn~SpI~~Y~iq~rt~~~---~  658 (1051)
T KOG3513|consen  588 DSGKYTCVAQTALDSASA--RADLLVR----GPPGPPPDVHVDDISDTTARLSWSPGSDNNSPIEKYTIQFRTPFP---G  658 (1051)
T ss_pred             cCceEEEEEEEeecchhc--ccceEEe----cCCCCCCceeEeeeccceEEEEeecCCCCCCCceEEeEEecCCCC---C
Confidence            888999998884432221  1123333    456788899999999999999999988888999999999998743   5


Q ss_pred             ceEEEee--cCc---eEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcE-EEecCCCCCC-CCCCceEEecCCCeEEEEEe
Q psy8771         529 AWETQVV--DNN---QLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQGVPS-QPRDLRAVDIQETAVTLAWS  601 (904)
Q Consensus       529 ~~~~~~~--~~~---~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~-~~~t~~~~p~-~p~~~~~~~~~~~~~~l~W~  601 (904)
                      .|+.+..  ...   .+.++.+|.|...|+|||+|+|..|.|++|.+. ..+|.+++|. +|.++.......+.+.|.|+
T Consensus       659 ~W~~v~~vp~~~~~~~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~pS~~~rT~ea~P~~~P~nv~g~g~~~~eLvItW~  738 (1051)
T KOG3513|consen  659 KWKAVTTVPGNITGDESATVVNLSPWVEYEFRVVAVNSIGIGEPSPPSEKVRTPEAAPSVNPSNVKGGGGSPTELVITWE  738 (1051)
T ss_pred             cceEeeECCCcccCccceeEEccCCCcceEEEEEEEcccccCCCCCCccceecCCCCCccCCccccccCCCCceEEEEec
Confidence            5665543  111   357899999999999999999999999998875 6788888885 89999999988999999999


Q ss_pred             CCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcc-ccceEEecc--cceEE
Q psy8771         602 KPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK-AKHHRRIGL--VETYS  678 (904)
Q Consensus       602 ~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~--~~~~~  678 (904)
                      +...                                       ...+|+-.+|+|.|+..+.. .|......+  ...+.
T Consensus       739 Pl~~---------------------------------------~~qNG~gfgY~Vswr~~g~~~~W~~~~v~~~d~~~~V  779 (1051)
T KOG3513|consen  739 PLPE---------------------------------------EEQNGPGFGYRVSWRPQGADKEWKEVIVSNQDQPRYV  779 (1051)
T ss_pred             cCCH---------------------------------------HHccCCCceEEEEEEeCCCCcccceeEecccCCceEE
Confidence            8742                                       23578899999999999988 665444433  23444


Q ss_pred             E--eCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEE
Q psy8771         679 L--TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQF  756 (904)
Q Consensus       679 l--~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~  756 (904)
                      +  ....|.+.|+|+|+|+|..|+|+.|..+.+.+.++.|..+|..+.+...+.+.+.|+|++|.  ..||.+++|.|+|
T Consensus       780 ~~~~st~~~tpyevKVqa~N~~GeGp~s~~~v~~S~Ed~P~~ap~~~~~~~~s~s~~~v~W~~~~--~~nG~l~gY~v~Y  857 (1051)
T KOG3513|consen  780 VSNESTEPFTPYEVKVQAINDQGEGPESQVTVGYSGEDEPPVAPTKLSAKPLSSSEVNLSWKPPL--WDNGKLTGYEVKY  857 (1051)
T ss_pred             EcCCCCCCcceeEEEEEEecCCCCCCCCceEEEEcCCCCCCCCCccceeecccCceEEEEecCcC--ccCCccceeEEEE
Confidence            4  44667999999999999999999999999999999999999999999999999999999994  6779999999999


Q ss_pred             EEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCCCC------------ccCC
Q psy8771         757 VETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEV------------CPTQ  823 (904)
Q Consensus       757 ~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~~v------------~~~~  823 (904)
                      +.............+. +.++..|.||++.+.|.|.|+|+|++|.|+.|.....+|...+|+.+            ....
T Consensus       858 ~~~~~~~~~~~~~~i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~pPs~~~~~p~g~~~~~~~~~~  937 (1051)
T KOG3513|consen  858 WKINEKEGSLSRVQIAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKAPPSQVDIAPPGNFIWKFSASI  937 (1051)
T ss_pred             EEcCCCcccccceeecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCCCCcccccCCCcceEEeeeeeE
Confidence            9986543322333444 99999999999999999999999999999999999999999998741            1111


Q ss_pred             --cceeeC--C----CCCceeeeeeeecCC--ceEEecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCCCCCCceEEe
Q psy8771         824 --NDFRKN--K----KTNGSNFKGGYLNDP--MRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIK  891 (904)
Q Consensus       824 --~~W~~p--~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~  891 (904)
                        +.|..-  .    ...||.+.+......  ............-....+  +-.|.++|++....|.|..+......
T Consensus       938 ~~l~w~~v~~~~nes~v~gYkV~~~~~~~~~~~~~~t~~~~~~~~~p~~~--~~~y~i~v~~~~~ggdg~~s~~~~~~ 1013 (1051)
T KOG3513|consen  938 LLLLWLLVSAFENESEVGGYKVLYREDLQNDIEIILTMKLDAEFPEPSDL--DGKYDIKVRGYSPGGDGTISEEISID 1013 (1051)
T ss_pred             EEEEEeeEEEEeecccCcceEEEEeecccCCceeEecccccccccCcccc--CCcceeEeccccCCCCCCcCCccccc
Confidence              167621  1    223343333222111  111111111111122333  27999999999999998776665433

>KOG3513|consensus

Probab=100.00  E-value=1.7e-50  Score=442.70  Aligned_cols=662  Identities=22%  Similarity=0.330  Sum_probs=486.4

Q ss_pred             CcceeeeccceEEE----EecCCCCCcceeeE-eeCCCCCCCCcEEEeccCCceEEEEeCCCCC-------------CCc
Q psy8771           2 DTRCYVESPEEVFI----ILCPLPPLIPGYIL-VTEPGTAPRDVQVRPLSSSTMVIQWDEPETP-------------NGQ   63 (904)
Q Consensus         2 ~~~~~~~~~~~~~~----~~~~~~p~~~~~~~-~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~~-------------~g~   63 (904)
                      .|+|+|++..+...    +.-..+|.....+. ..........+.|+..+.+..+++|.+...+             +|.
T Consensus       308 ~Y~C~AeN~~G~~~~~~~v~v~a~P~w~~~~~d~~~~~gs~v~~eC~a~g~P~p~v~WlkNg~pl~~~~r~~~~~i~~g~  387 (1051)
T KOG3513|consen  308 EYECIAENSRGSATHSGHVTVYAPPYWLQKPQDTEADTGSNVTLECKASGKPNPTVKWLKNGEPLEPAERDPRYKIDDGT  387 (1051)
T ss_pred             EEEEEEecccccceeeEEEEEecCchhhcccceeEecCCCCeEEEEEecCCCCCceEEeeCCeecCccCCCcceEEeCCE
Confidence            48999999988432    22225665543333 2222347888889999999999999887422             566


Q ss_pred             eecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCC-ceEEecCCCeEEEEEEccCCCCeEEEeeC
Q psy8771          64 ITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPA-LLEVMLDSPLNLSCVAVGSPMPFVKWRKG  142 (904)
Q Consensus        64 i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~i~W~k~  142 (904)
                      |+...+...+.....|...+..+-..+.+.|.|.    ..+|.|...|.+ .+.+..|..+.|.|.+.+.|.|.++|.|+
T Consensus       388 L~is~v~~~dsg~YQC~A~Nk~G~i~anA~L~V~----a~~P~f~~~p~~~~~~a~~g~~v~i~C~~~asP~p~~~W~k~  463 (1051)
T KOG3513|consen  388 LIISNVQESDSGVYQCIAENKYGTIYANAELKVL----ASAPVFPLNPVERKVMAVVGGTVTIDCKPFASPKPKVSWLKG  463 (1051)
T ss_pred             EEEEecccccCeEEEeeeecccceEeeeeEEEEE----ccCCCCCCCccceEEEEEeCCeEEEeeccCCCCcceEEEEcC
Confidence            6666667777777777777777777788888886    567777777764 37889999999999999999999999999


Q ss_pred             CccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEE
Q psy8771         143 QNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL  219 (904)
Q Consensus       143 ~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l  219 (904)
                      ++ .+..+.|+.+ .+|+|.|.++  +|+|.|+|.|.|.+|.+++.+.|.|..  ++.+..  +|.+..+.  ...+++|
T Consensus       464 ~~-~~~~~~r~~i~edGtL~I~n~t~~DaG~YtC~A~N~~G~a~~~~~L~Vkd--~tri~~--~P~~~~v~--~g~~v~l  536 (1051)
T KOG3513|consen  464 GE-KLLQSGRIRILEDGTLEISNVTRSDAGKYTCVAENKLGKAESTGNLIVKD--ATRITL--APSNTDVK--VGESVTL  536 (1051)
T ss_pred             Cc-ccccCceEEECCCCcEEecccCcccCcEEEEEEEcccCccceEEEEEEec--CceEEe--ccchhhhc--cCceEEE
Confidence            44 6777788876 8999999999  699999999999999999999999982  222222  45544332  2345555


Q ss_pred             EEeCCCccceEEEEEEEeCCC-------CCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCC
Q psy8771         220 DWTYPSETLLYYVIQYKPKAA-------NTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET  292 (904)
Q Consensus       220 ~W~~~~~~~~~y~v~~~~~~~-------~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~  292 (904)
                      .++....+...-.+.|..++.       +..+....+.+...++|.+++..+.+.|.|+|............+.++.   
T Consensus       537 ~Ce~shD~~ld~~f~W~~nG~~id~~~~~~~~~~~~~~~~g~L~i~nv~l~~~G~Y~C~aqT~~Ds~s~~A~l~V~g---  613 (1051)
T KOG3513|consen  537 TCEASHDPSLDITFTWKKNGRPIDFNPDGDHFEINDGSDSGRLTIANVSLEDSGKYTCVAQTALDSASARADLLVRG---  613 (1051)
T ss_pred             EeecccCCCcceEEEEEECCEEhhccCCCCceEEeCCcCccceEEEeeccccCceEEEEEEEeecchhcccceEEec---
Confidence            555542222222233333221       2233333333336799999999999999999988655443334444443   


Q ss_pred             CCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCccee
Q psy8771         293 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVR  372 (904)
Q Consensus       293 ~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~  372 (904)
                       ||.||.++.+...+.+++.|+|.+..+.+..|..|                      .++.+.....+           
T Consensus       614 -pPgpP~~v~~~~i~~t~~~lsW~~g~dn~SpI~~Y----------------------~iq~rt~~~~~-----------  659 (1051)
T KOG3513|consen  614 -PPGPPPDVHVDDISDTTARLSWSPGSDNNSPIEKY----------------------TIQFRTPFPGK-----------  659 (1051)
T ss_pred             -CCCCCCceeEeeeccceEEEEeecCCCCCCCceEE----------------------eEEecCCCCCc-----------
Confidence             35677799999999999999999988877665543                      33222210000           


Q ss_pred             eccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeE
Q psy8771         373 TKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTL  452 (904)
Q Consensus       373 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~  452 (904)
                                                          ...+.                .+.....+. ...++.+|.|..+
T Consensus       660 ------------------------------------W~~v~----------------~vp~~~~~~-~sa~vv~L~Pwv~  686 (1051)
T KOG3513|consen  660 ------------------------------------WKAVT----------------TVPGNITGD-ESATVVNLSPWVE  686 (1051)
T ss_pred             ------------------------------------ceEee----------------ECCCcccCc-cceeEEccCCCcc
Confidence                                                00000                001111122 2356889999999


Q ss_pred             EEEEEEEeeCCCCCCCCCC-ceeeecCCCCCCCCCCeEEEecCCceEEEEecC--CCCCCCceeeEEEEEEeCCCCCCcc
Q psy8771         453 YYIWLAAQSPRGEGATTPP-IPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE--PETPNGQITGYKVYYTQDQSLPMSA  529 (904)
Q Consensus       453 Y~~~v~a~~~~g~~~~s~~-~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~  529 (904)
                      |+|||+|.|..|.+..|.+ ..++|.+++|...|.++.......+.|.|+|++  +...+|+-.+|+|.|+..+..  ..
T Consensus       687 YeFRV~AvN~iG~gePS~pS~~~rT~ea~P~~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~--~~  764 (1051)
T KOG3513|consen  687 YEFRVVAVNSIGIGEPSPPSEKVRTPEAAPSVNPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGAD--KE  764 (1051)
T ss_pred             eEEEEEEEcccccCCCCCCccceecCCCCCccCCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCC--cc
Confidence            9999999999999998877 678899999999999999999999999999999  345678899999999998754  36


Q ss_pred             eEEEeecC--ceEEEEc--CCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCC-CCCCCceEEecCCCeEEEEEeCCC
Q psy8771         530 WETQVVDN--NQLTTIS--DLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP-SQPRDLRAVDIQETAVTLAWSKPT  604 (904)
Q Consensus       530 ~~~~~~~~--~~~~~~~--~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p-~~p~~~~~~~~~~~~~~l~W~~~~  604 (904)
                      |......+  ...+.+.  -..|.+.|.++|+|+|..|.|+.|..+.+....+.| .+|..+.+...+.+.+.|+|+++.
T Consensus       765 W~~~~v~~~d~~~~V~~~~st~~~tpyevKVqa~N~~GeGp~s~~~v~~S~Ed~P~~ap~~~~~~~~s~s~~~v~W~~~~  844 (1051)
T KOG3513|consen  765 WKEVIVSNQDQPRYVVSNESTEPFTPYEVKVQAINDQGEGPESQVTVGYSGEDEPPVAPTKLSAKPLSSSEVNLSWKPPL  844 (1051)
T ss_pred             cceeEecccCCceEEEcCCCCCCcceeEEEEEEecCCCCCCCCceEEEEcCCCCCCCCCccceeecccCceEEEEecCcC
Confidence            77766644  2445554  456799999999999999999999999998888777 489999999999999999999987


Q ss_pred             CCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc---ceEEecccceEEEeC
Q psy8771         605 HSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK---HHRRIGLVETYSLTG  681 (904)
Q Consensus       605 ~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~---~~~~~~~~~~~~l~~  681 (904)
                      .                                         .+|.+.+|.|+|+..+....   .....++.++..|.|
T Consensus       845 ~-----------------------------------------~nG~l~gY~v~Y~~~~~~~~~~~~~~i~~~~~~~~ltg  883 (1051)
T KOG3513|consen  845 W-----------------------------------------DNGKLTGYEVKYWKINEKEGSLSRVQIAGNRTSWRLTG  883 (1051)
T ss_pred             c-----------------------------------------cCCccceeEEEEEEcCCCcccccceeecCCcceEeeeC
Confidence            5                                         56788999999998876632   333446778999999


Q ss_pred             CCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC----CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEE
Q psy8771         682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA----PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFV  757 (904)
Q Consensus       682 L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~----~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~  757 (904)
                      |++.+.|.|.|+|+|.+|.|+.|.....+|...+|..    +|. ..+.......+.|.|....+-.....+.+|.|.++
T Consensus       884 L~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~pPs~~~~~p~g-~~~~~~~~~~~~l~w~~v~~~~nes~v~gYkV~~~  962 (1051)
T KOG3513|consen  884 LEPNTKYRFYVRAYTSAGGGPASSEENVTTKKAPPSQVDIAPPG-NFIWKFSASILLLLWLLVSAFENESEVGGYKVLYR  962 (1051)
T ss_pred             CCCCceEEEEEEEecCCCCCCCccceeccccCCCCcccccCCCc-ceEEeeeeeEEEEEEeeEEEEeecccCcceEEEEe
Confidence            9999999999999999999999999999999988886    444 45556678899999998866555556899999999


Q ss_pred             EccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEee
Q psy8771         758 ETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIR  810 (904)
Q Consensus       758 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~  810 (904)
                      ...................-...++  +..|.++|++....|.|..++.+...
T Consensus       963 ~~~~~~~~~~~t~~~~~~~~~p~~~--~~~y~i~v~~~~~ggdg~~s~~~~~~ 1013 (1051)
T KOG3513|consen  963 EDLQNDIEIILTMKLDAEFPEPSDL--DGKYDIKVRGYSPGGDGTISEEISID 1013 (1051)
T ss_pred             ecccCCceeEecccccccccCcccc--CCcceeEeccccCCCCCCcCCccccc
Confidence            8875433111111112222222333  27999999999999999877766543

>KOG4222|consensus

Probab=100.00  E-value=7.7e-34  Score=307.47  Aligned_cols=730  Identities=20%  Similarity=0.267  Sum_probs=437.8

Q ss_pred             CCCCcce---eeEeeCCCCCCCCcEEEeccCCceEEEEeCCCC--------------CCCceecccc---ccc--ccceE
Q psy8771          20 LPPLIPG---YILVTEPGTAPRDVQVRPLSSSTMVIQWDEPET--------------PNGQITHPPT---RAA--RSHAR   77 (904)
Q Consensus        20 ~~p~~~~---~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~--------------~~g~i~~~~~---~~~--~~~~~   77 (904)
                      .+|.|..   .+.+..  ++|..|.|+.-+.+..+|+|.+...              +.|++..+.+   +..  +.+.+
T Consensus        30 ~~p~iiehp~d~vvs~--~~patlnc~asG~ppPti~w~k~G~~~~~~e~~shR~~lp~gsLf~l~~ahg~~a~~d~G~y  107 (1281)
T KOG4222|consen   30 QPPRIIEHPHDLVVSK--GEPATLNCKASGDPPPTIEWYKDGENVFKGEPGSHRFLLPDGSLFLLRLAHGKKAGHDHGVY  107 (1281)
T ss_pred             CCCceEecchhhhccC--CCCceeecCCCCCCCCceecccCCcccCCCCCCCcceecCCccEEEEecccCCcccCCCcee
Confidence            5555522   233333  3799999999999999999987641              1455322211   111  44555


Q ss_pred             EEEeee-ccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCC-C--Cc
Q psy8771          78 LAAQSV-LRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTP-D--DK  152 (904)
Q Consensus        78 ~~~~~~-~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~-~--~~  152 (904)
                      .|+..+ ++.+....+.+.++    -.+-.|...|.+ +.+..|+.+.|+|.- .|.|.|.|.|.|+ |..+.. .  .+
T Consensus       108 ~cvasn~~g~avSr~a~L~va----vlrddfrv~prd-~~~a~ge~avlEcgpP~ghpeptvSw~Kd-g~pl~~~~~~~~  181 (1281)
T KOG4222|consen  108 SCVASNRLGEAVSRGASLIVA----VLRDDFRVSPRD-VQAAVGEEAVLECGPPRGHPEPTVSWVKD-GKPLDHYDVPII  181 (1281)
T ss_pred             EeeecCccceeeecCceEEEE----EechhcccCccc-ccccccceeEEeccCCCCCCCCcceeecC-CCccccccceeE
Confidence            655544 44444445555543    223346667777 889999999999965 5999999999999 655542 2  23


Q ss_pred             eeecceEEEEeee--cCCeEEEEEEEecCcce-EEEEEEEEEeecCCCCCCC---CCCcceEEEeecCCeEEEEEeCCCc
Q psy8771         153 LPVGRNVLTLDRV--TESENYTCIAASVLGVI-ETSTIVKVQCKYAPLLTLP---VAPLDVKISEVTATSVRLDWTYPSE  226 (904)
Q Consensus       153 ~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~-~~~~~l~v~~~~~~~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~  226 (904)
                      ..+++|.|.|.++  +|.|.|.|.+.|..|.. +..++|+|+       ..|   ..|.++.+....+  +.+.+...+.
T Consensus       182 ~lisgG~LlIsnvrksD~GtY~CVatNmvG~ReS~~A~lsv~-------e~P~f~~rp~~~~v~~g~~--~~f~c~v~Gd  252 (1281)
T KOG4222|consen  182 ALISGGNLLISNVRKSDEGTYACVATNMVGERESIPARLSVQ-------EKPWFWKRPKDLAVLVGAA--AEFDCRVGGD  252 (1281)
T ss_pred             EEecCCcEEEeccccCCCceeeeeecccccccccccceeeec-------cCCccccccccceeecccc--cccccccCCC
Confidence            3468999999999  69999999999999994 457888888       333   2455554332222  3333333332


Q ss_pred             cceEEEEEEEeCCCCCCeEEe-ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCc-----
Q psy8771         227 TLLYYVIQYKPKAANTPYSEI-SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRD-----  300 (904)
Q Consensus       227 ~~~~y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~-----  300 (904)
                      +..  .|.|+..+........ ....+.++.|....|.++..|.|.|.|..|.-.++....+...+. ....|.+     
T Consensus       253 P~P--~Vrwkk~~~~~P~~ry~i~~d~qtl~i~r~tp~deg~y~C~a~n~vG~l~asa~ltV~apP~-f~kkp~dq~v~l  329 (1281)
T KOG4222|consen  253 PQP--TVRWKKDDPSLPRSRYSILDDTQTLRIDRVTPTDEGTYVCPAENLVGGLEASATLTVQAPPS-FGKKPRDQKVAL  329 (1281)
T ss_pred             CCC--ceeeeccCCCCCccceeeeeccccccccccCCCcccceeeeccccccccccccceEEecCcc-cccccCcccccc
Confidence            222  2333332222111111 111225688899999999999999999999877676666654321 1111111     


Q ss_pred             -----eEecccCCCeeEEEecC-----------CCCCCceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCC
Q psy8771         301 -----VQVRPLSSSTMVIQWDE-----------PETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA  364 (904)
Q Consensus       301 -----l~~~~~~~~~v~l~W~~-----------p~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~  364 (904)
                           +.+...+.-.-.+.|.+           |...++.-.      +....+..++++.....-.+.+.+.+..|.+.
T Consensus       330 g~~vt~pc~~~gnP~PavfW~keg~q~llf~~~p~~~~~r~s------vs~~g~L~it~v~~~d~g~Yvcq~~~~~~ss~  403 (1281)
T KOG4222|consen  330 GGTVTFPCETLGNPPPAVFWLKEGSQDLLFSASPPSSNGRGS------VSPTGTLTITNVRQSDEGYYVCQTQTSAGSSL  403 (1281)
T ss_pred             CceEEeeeecCCCCCcceEEeccCcceecccCCCCCcCccce------ecCCCCcccccccccccceEeecccccccccc
Confidence                 11111222222233332           222221111      01111445555555444444444444444332


Q ss_pred             CCCCcceeeccC--CCCCCCCcccccccccceeeeEEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCce
Q psy8771         365 TTPPIPVRTKQY--GKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGF  442 (904)
Q Consensus       365 ~s~~~~~~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  442 (904)
                      ......+.....  .+++.......+.....+....+.-.-....+.-.-|+.+    |.+.....   ...........
T Consensus       404 ~~a~~~qt~~~~~~rPpp~i~~g~~nQtl~v~s~a~l~c~atg~P~p~i~wl~d----g~~v~~~d---~~~s~~~~~~l  476 (1281)
T KOG4222|consen  404 TKAYLEQTDVLTDSRPPPIIEQGPANQTLPVGSTASLPCSATGAPTPNISWLKD----GCNVMNPD---SRISQQEIGSL  476 (1281)
T ss_pred             cceeEEEEeeeccCCCCceeeecccccccccCcccccChhhhCCCCCCchhhhc----ccccccCC---cccceeeecee
Confidence            221111111111  1111111111111111111110000000000000000000    00000000   00000012345


Q ss_pred             eeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeec-----------CCCCCCCCCCeEEEecCCceEEEEecCCCCCC-C
Q psy8771         443 GEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTK-----------QYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN-G  510 (904)
Q Consensus       443 ~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~-----------~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~-~  510 (904)
                      ++.+|+-...|.|++.|.+..|++.++..+.+.-.           ...-+++|....+..++.++++|+|.+....+ +
T Consensus       477 ~i~dl~~~DtG~YTc~as~~~ges~wSatl~v~~~~~s~q~~r~~D~S~~pS~p~~p~v~~v~~~~v~LsW~~~s~sg~v  556 (1281)
T KOG4222|consen  477 RIRDLKGPDTGRYTCIASDESGESTWSATLTVEKAGSSQQFCRCEDPSALPSPPGTPGVVNVSRTSVTLSWQPTSPSGAV  556 (1281)
T ss_pred             eeeeeecCCCcceeeeccCcccccccceeeEhhhcCcccccccCCChhhCCCCCCCCccccCCCceEEecccCCCCCCcc
Confidence            78889999999999999999999988876554321           11234667777888899999999999976533 4


Q ss_pred             ceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcE-EEecCCCCCCCC-CCce
Q psy8771         511 QITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQGVPSQP-RDLR  587 (904)
Q Consensus       511 ~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~-~~~t~~~~p~~p-~~~~  587 (904)
                      ++.+|.+++...+..  ..|..... -..+.+.|.+|+|++.|.|.|+|.|..|.+..|... .++|....+..- .+-.
T Consensus       557 P~s~yiieafs~~~~--etw~~ta~~v~~t~~~I~gL~P~~sylf~vRa~n~~Gis~Ps~~S~~vrta~a~~~~a~ad~~  634 (1281)
T KOG4222|consen  557 PASGYIIEAFSPDLG--ETWQTTAGRVKTTTYAIRGLKPNLSYLFLVRAENEQGISDPSTSSDPVRTAPADAAAAGADHQ  634 (1281)
T ss_pred             ccchhHHHHhhhhhc--ccccccccccccceeeecCcCccceeeeeeeccccccccCCcccCCccccCCCChhhhhhhHH
Confidence            889999998776533  44555443 456778999999999999999999999987655432 233322221110 0000


Q ss_pred             EEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCC-CCCceeeEEEEEEeCCcccc
Q psy8771         588 AVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTH-SGENIISYELYWNDTYAKAK  666 (904)
Q Consensus       588 ~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~-~~~~~~~y~v~~~~~~~~~~  666 (904)
                      -.........|.|..+.                          ..+.+++.+.|+.+.. +...+.+|+|.|+.......
T Consensus       635 k~~~~ls~~l~~l~~~~--------------------------~L~asslr~~w~~~kq~~~~~i~g~~I~~r~~~~~~a  688 (1281)
T KOG4222|consen  635 KVQRELSNELLRLSNPN--------------------------VLNASSLRLGWTKDKQHGSQYIQGYRISYRSLGSQLA  688 (1281)
T ss_pred             HHHHhhcccceeecccc--------------------------ccchhheeeeeeeecccCcccccceEEEeccCccccc
Confidence            00001112445666553                          2567777777877654 46789999999998876221


Q ss_pred             ----ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCC---CCCCCCeeEEecCCCCCCCCCCcE---EEecCCCEEEEE
Q psy8771         667 ----HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE---GATTPPIPVRTKQYVPGAPPQNVS---CEPLSSTSIRIS  736 (904)
Q Consensus       667 ----~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~---~~~s~~~~~~t~~~~p~~~P~~l~---~~~~~~~~v~l~  736 (904)
                          ..........+.+.+|.|++.|+|.+..+...|.   |.++....+.|.+.+|..+|.++.   .-..+.++..|+
T Consensus       689 ~~s~~~v~~~t~~s~v~~nl~p~t~ye~f~~Pf~~~~~s~~g~pS~sk~alt~e~~PSapp~~~~~~s~~~~n~Ta~~Vs  768 (1281)
T KOG4222|consen  689 QWSNAGVTVPTPESVVVPNLKPGTNYEFFVRPFFPHGYSIQGAPSNSKTALTLEEPPSAPPQGVQHVSKGSYNGTAGSVS  768 (1281)
T ss_pred             cccccceeccCCcceeccccCCCccceeeccCccCCCcceecCCcccccccccccCCCCCCCCccccccccCCCceeeEE
Confidence                2334445678999999999999999999999664   677888999999999999999854   444567899999


Q ss_pred             ecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeec
Q psy8771         737 WEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT  811 (904)
Q Consensus       737 W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t  811 (904)
                      |.+++.+..||.+.+|.|........ ......... ...+.+|.+|.+|..|.|+|.|.+.+|.|..+.+..+.+
T Consensus       769 w~~pp~d~~ng~~qg~ki~~~~~e~t-r~h~n~t~~a~~~sv~i~~l~~g~ay~vtv~a~T~aGvG~~s~p~~~~~  843 (1281)
T KOG4222|consen  769 WAPPPADVQNGILQGYKIECSGGEKT-RIHINKTTNARTGSVTIGNLVTGIAYSVTVAARTGAGVGVKSPPQPIVF  843 (1281)
T ss_pred             ecCCcccccCCcccceeEEeecCccc-cccccccccCCCCceEeccccccceEEEEEeeecCCccCCCCCCeeeec
Confidence            99999999999999999998765521 111223333 778899999999999999999999999999887666433

>KOG4222|consensus

Probab=100.00  E-value=2.8e-30  Score=280.10  Aligned_cols=730  Identities=19%  Similarity=0.212  Sum_probs=420.6

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC---CCCceeecceEEEEeee-------cCCeEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT---PDDKLPVGRNVLTLDRV-------TESENY  171 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~---~~~~~~~~~~~l~i~~l-------~d~g~Y  171 (904)
                      ..+|.|+..|.+ +.+..|++++|.|.+.|+|.|+|+|+|+|...+.   ...|+...+++|.+-.+       .|.|.|
T Consensus        29 d~~p~iiehp~d-~vvs~~~patlnc~asG~ppPti~w~k~G~~~~~~e~~shR~~lp~gsLf~l~~ahg~~a~~d~G~y  107 (1281)
T KOG4222|consen   29 DQPPRIIEHPHD-LVVSKGEPATLNCKASGDPPPTIEWYKDGENVFKGEPGSHRFLLPDGSLFLLRLAHGKKAGHDHGVY  107 (1281)
T ss_pred             cCCCceEecchh-hhccCCCCceeecCCCCCCCCceecccCCcccCCCCCCCcceecCCccEEEEecccCCcccCCCcee
Confidence            689999999999 9999999999999999999999999999434443   35678888888888766       388999


Q ss_pred             EEEEEecCcc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE---Ee
Q psy8771         172 TCIAASVLGV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS---EI  247 (904)
Q Consensus       172 ~c~a~n~~g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~---~~  247 (904)
                      .|.|.|..|. .+..+.|.+.....   ..-..|..+++  .....+.+++.+|.+ ..--.|.|.+++....+.   ..
T Consensus       108 ~cvasn~~g~avSr~a~L~vavlrd---dfrv~prd~~~--a~ge~avlEcgpP~g-hpeptvSw~Kdg~pl~~~~~~~~  181 (1281)
T KOG4222|consen  108 SCVASNRLGEAVSRGASLIVAVLRD---DFRVSPRDVQA--AVGEEAVLECGPPRG-HPEPTVSWVKDGKPLDHYDVPII  181 (1281)
T ss_pred             EeeecCccceeeecCceEEEEEech---hcccCcccccc--cccceeEEeccCCCC-CCCCcceeecCCCccccccceeE
Confidence            9999999998 44556666552211   22235555433  344556666665521 111124444443322211   11


Q ss_pred             ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeE
Q psy8771         248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA  327 (904)
Q Consensus       248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~  327 (904)
                      .-.....+.|.+++..+++.|.|.|.|..|.-...............-..|.++.+....+  +.+.+..+.++...+.+
T Consensus       182 ~lisgG~LlIsnvrksD~GtY~CVatNmvG~ReS~~A~lsv~e~P~f~~rp~~~~v~~g~~--~~f~c~v~GdP~P~Vrw  259 (1281)
T KOG4222|consen  182 ALISGGNLLISNVRKSDEGTYACVATNMVGERESIPARLSVQEKPWFWKRPKDLAVLVGAA--AEFDCRVGGDPQPTVRW  259 (1281)
T ss_pred             EEecCCcEEEeccccCCCceeeeeecccccccccccceeeeccCCccccccccceeecccc--cccccccCCCCCCceee
Confidence            2233467999999999999999999999998653322111111111223444444433221  22223222222222222


Q ss_pred             EE---------EEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeE
Q psy8771         328 KH---------HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVET  398 (904)
Q Consensus       328 ~~---------~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  398 (904)
                      ..         ........+..+....|..+-.+.+.+.+..|.-..+....|...     +.++..........+....
T Consensus       260 kk~~~~~P~~ry~i~~d~qtl~i~r~tp~deg~y~C~a~n~vG~l~asa~ltV~ap-----P~f~kkp~dq~v~lg~~vt  334 (1281)
T KOG4222|consen  260 KKDDPSLPRSRYSILDDTQTLRIDRVTPTDEGTYVCPAENLVGGLEASATLTVQAP-----PSFGKKPRDQKVALGGTVT  334 (1281)
T ss_pred             eccCCCCCccceeeeeccccccccccCCCcccceeeeccccccccccccceEEecC-----cccccccCccccccCceEE
Confidence            11         111111234455566666777777778877776666554444432     2222222222222222222


Q ss_pred             EEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecC
Q psy8771         399 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ  478 (904)
Q Consensus       399 ~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~  478 (904)
                      +.-.-+.....-.||..-....-.+...+.-+-........-..+++++.....-.|-+.+.+..|.+..-.........
T Consensus       335 ~pc~~~gnP~PavfW~keg~q~llf~~~p~~~~~r~svs~~g~L~it~v~~~d~g~Yvcq~~~~~~ss~~~a~~~qt~~~  414 (1281)
T KOG4222|consen  335 FPCETLGNPPPAVFWLKEGSQDLLFSASPPSSNGRGSVSPTGTLTITNVRQSDEGYYVCQTQTSAGSSLTKAYLEQTDVL  414 (1281)
T ss_pred             eeeecCCCCCcceEEeccCcceecccCCCCCcCccceecCCCCcccccccccccceEeecccccccccccceeEEEEeee
Confidence            22222211112222221100000000000000000001112267888888888777888888888776544433332221


Q ss_pred             CCCCCCCCCeEEEecCC----ceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE-eecCceEEEEcCCCCCCeEE
Q psy8771         479 YEPGTAPRDVQVRPLSS----STMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ-VVDNNQLTTISDLTPHTIYT  553 (904)
Q Consensus       479 ~~p~~~p~~l~v~~~~~----~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~p~t~Y~  553 (904)
                      .. ..||-.+.....+.    .+..+-|....   +. -.|.+.|..++-. ...|... ..-......+.+|.-.-.|.
T Consensus       415 ~~-~rPpp~i~~g~~nQtl~v~s~a~l~c~at---g~-P~p~i~wl~dg~~-v~~~d~~~s~~~~~~l~i~dl~~~DtG~  488 (1281)
T KOG4222|consen  415 TD-SRPPPIIEQGPANQTLPVGSTASLPCSAT---GA-PTPNISWLKDGCN-VMNPDSRISQQEIGSLRIRDLKGPDTGR  488 (1281)
T ss_pred             cc-CCCCceeeecccccccccCcccccChhhh---CC-CCCCchhhhcccc-cccCCcccceeeeceeeeeeeecCCCcc
Confidence            11 12222222222111    12223332211   10 1234444443311 1111111 11122345677777777888


Q ss_pred             EEEEEEeCCCCCCCCCcEEEecCC------------CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCC
Q psy8771         554 IRVQAFTSVGPGPLSAPVLVKTQQ------------GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY  621 (904)
Q Consensus       554 ~~V~a~~~~g~~~~S~~~~~~t~~------------~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~  621 (904)
                      +++.|.+..|...||..+.+.-..            ..|++|..-.+..++.++++|+|.+...                
T Consensus       489 YTc~as~~~ges~wSatl~v~~~~~s~q~~r~~D~S~~pS~p~~p~v~~v~~~~v~LsW~~~s~----------------  552 (1281)
T KOG4222|consen  489 YTCIASDESGESTWSATLTVEKAGSSQQFCRCEDPSALPSPPGTPGVVNVSRTSVTLSWQPTSP----------------  552 (1281)
T ss_pred             eeeeccCcccccccceeeEhhhcCcccccccCCChhhCCCCCCCCccccCCCceEEecccCCCC----------------
Confidence            899999999988888765543221            2344555556666666677777766532                


Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEE--ecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRR--IGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                                              .+..++.+|.+++...+-.+.....  ....+.+.|.+|+|++.|.|.|+|.|..|
T Consensus       553 ------------------------sg~vP~s~yiieafs~~~~etw~~ta~~v~~t~~~I~gL~P~~sylf~vRa~n~~G  608 (1281)
T KOG4222|consen  553 ------------------------SGAVPASGYIIEAFSPDLGETWQTTAGRVKTTTYAIRGLKPNLSYLFLVRAENEQG  608 (1281)
T ss_pred             ------------------------CCccccchhHHHHhhhhhcccccccccccccceeeecCcCccceeeeeeecccccc
Confidence                                    1456888899998776655443222  23457899999999999999999999999


Q ss_pred             CCCCCCCe-eEEecCCCCCCC---------------CCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC
Q psy8771         700 EGATTPPI-PVRTKQYVPGAP---------------PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD  763 (904)
Q Consensus       700 ~~~~s~~~-~~~t~~~~p~~~---------------P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~  763 (904)
                      .+.++..- .++|.+..+...               -..-.....++.+|.+.|..... +....+.+|.|.|+......
T Consensus       609 is~Ps~~S~~vrta~a~~~~a~ad~~k~~~~ls~~l~~l~~~~~L~asslr~~w~~~kq-~~~~~i~g~~I~~r~~~~~~  687 (1281)
T KOG4222|consen  609 ISDPSTSSDPVRTAPADAAAAGADHQKVQRELSNELLRLSNPNVLNASSLRLGWTKDKQ-HGSQYIQGYRISYRSLGSQL  687 (1281)
T ss_pred             ccCCcccCCccccCCCChhhhhhhHHHHHHhhcccceeeccccccchhheeeeeeeecc-cCcccccceEEEeccCcccc
Confidence            98776432 234433211110               00112244567899999998742 33567999999999987522


Q ss_pred             CccEEEEec--CcceEEecCCCCCceEEEEEEEeeCCC---CCCCCCcEEeecCCCCCCC----C----------ccCCc
Q psy8771         764 SEASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSIG---DGPSSYPITIRTHEDDPSE----V----------CPTQN  824 (904)
Q Consensus       764 ~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~g---~g~~s~~~~~~t~~~~P~~----v----------~~~~~  824 (904)
                      .......+.  ....+.+.+|+|++.|+|.++.+...|   .|..+.+..+.|.+.+|+.    +          ++..+
T Consensus       688 a~~s~~~v~~~t~~s~v~~nl~p~t~ye~f~~Pf~~~~~s~~g~pS~sk~alt~e~~PSapp~~~~~~s~~~~n~Ta~~V  767 (1281)
T KOG4222|consen  688 AQWSNAGVTVPTPESVVVPNLKPGTNYEFFVRPFFPHGYSIQGAPSNSKTALTLEEPPSAPPQGVQHVSKGSYNGTAGSV  767 (1281)
T ss_pred             ccccccceeccCCcceeccccCCCccceeeccCccCCCcceecCCcccccccccccCCCCCCCCccccccccCCCceeeE
Confidence            222333333  778899999999999999999998855   4677888889998888854    2          22233


Q ss_pred             ceeeCC--CCCceeeeeee--ecCC-ce---EEecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCCCCCCceEEec
Q psy8771         825 DFRKNK--KTNGSNFKGGY--LNDP-MR---FDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKT  892 (904)
Q Consensus       825 ~W~~p~--~~~~~~~~~~~--~~~~-~~---~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~t  892 (904)
                      .|.+|.  ..||.+..|.+  .+.. ..   ...++....+..|.+|.+|..|.|+|.|.+.+|.|..+.+..+.+
T Consensus       768 sw~~pp~d~~ng~~qg~ki~~~~~e~tr~h~n~t~~a~~~sv~i~~l~~g~ay~vtv~a~T~aGvG~~s~p~~~~~  843 (1281)
T KOG4222|consen  768 SWAPPPADVQNGILQGYKIECSGGEKTRIHINKTTNARTGSVTIGNLVTGIAYSVTVAARTGAGVGVKSPPQPIVF  843 (1281)
T ss_pred             EecCCcccccCCcccceeEEeecCccccccccccccCCCCceEeccccccceEEEEEeeecCCccCCCCCCeeeec
Confidence            898553  45666554433  2222 11   113457778999999999999999999999999998777765444

>KOG0196|consensus

Probab=99.71  E-value=1.2e-15  Score=161.48  Aligned_cols=192  Identities=26%  Similarity=0.406  Sum_probs=152.4

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceE-----EEee-----cCceEEEEcCCCC
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWE-----TQVV-----DNNQLTTISDLTP  548 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~-----~~~~-----~~~~~~~~~~L~p  548 (904)
                      .||++|.+|... ++.+++.|.|.+|.+.+| ....|.|.++...... ..+.     ....     -..+...+.+|.|
T Consensus       330 ~PPSaP~nlis~-vn~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~-~~C~~Cg~~V~f~P~q~gLt~~~V~v~~L~a  407 (996)
T KOG0196|consen  330 RPPSAPRNLISN-VNGTSLILEWSPPADTGGREDITYNVICKKCGGGR-GACEPCGDNVRFTPRQRGLTETSVTVSDLLA  407 (996)
T ss_pred             CCCCccceeeee-cccceEEEEecCCcccCCCcceEEEEEeeccCCCC-CccccCCCCceECCCCCCcccceEEEecccc
Confidence            578999999755 899999999999998887 6677888887765221 1111     1111     2356789999999


Q ss_pred             CCeEEEEEEEEeCCCC-C---CCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCC
Q psy8771         549 HTIYTIRVQAFTSVGP-G---PLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP  624 (904)
Q Consensus       549 ~t~Y~~~V~a~~~~g~-~---~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p  624 (904)
                      .+.|+|.|.|+|+... +   .....+.++|....|+++..++....+.++++|+|..|..                   
T Consensus       408 h~~YTFeV~AvNgVS~lsp~~~~~a~vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~-------------------  468 (996)
T KOG0196|consen  408 HTNYTFEVEAVNGVSDLSPFPRQFASVNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQ-------------------  468 (996)
T ss_pred             ccccEEEEEEeecccccCCCCCcceeEEeeccccCCCccceEEEeeeccCceEEecCCCCC-------------------
Confidence            9999999999998542 1   2334567888888888889999999899999999998876                   


Q ss_pred             cceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCC
Q psy8771         625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGAT  703 (904)
Q Consensus       625 ~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~  703 (904)
                                            .++.+..|+|+|.+.+..+. ........+..+|.+|+|++.|.|+|+|.+..|.|..
T Consensus       469 ----------------------png~ildYEvky~ek~~~e~~~~~~~t~~~~~ti~gL~p~t~YvfqVRarT~aG~G~~  526 (996)
T KOG0196|consen  469 ----------------------PNGVILDYEVKYYEKDEDERSYSTLKTKTTTATITGLKPGTVYVFQVRARTAAGYGPY  526 (996)
T ss_pred             ----------------------CCCcceeEEEEEeeccccccceeEEecccceEEeeccCCCcEEEEEEEEecccCCCCC
Confidence                                  67778999999998875444 3444556679999999999999999999999999999


Q ss_pred             CCCeeEEecCC
Q psy8771         704 TPPIPVRTKQY  714 (904)
Q Consensus       704 s~~~~~~t~~~  714 (904)
                      |....+.|.+.
T Consensus       527 S~~~~fqT~~~  537 (996)
T KOG0196|consen  527 SGKHEFQTLPS  537 (996)
T ss_pred             CCceeeeecCc
Confidence            99999999865

>KOG0196|consensus

Probab=99.67  E-value=4e-15  Score=157.73  Aligned_cols=189  Identities=25%  Similarity=0.365  Sum_probs=151.5

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCC-CceeeEEEEEEeCCcccc-------ceEEec-----ccceEEEeCCCCCc
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSG-ENIISYELYWNDTYAKAK-------HHRRIG-----LVETYSLTGLYPNT  686 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~-~~~~~y~v~~~~~~~~~~-------~~~~~~-----~~~~~~l~~L~p~t  686 (904)
                      +|++|.+|... ++.+++.|.|++|.+.+ .....|.|.+..-.....       .....+     ....+.+.+|.|.+
T Consensus       331 PPSaP~nlis~-vn~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg~~V~f~P~q~gLt~~~V~v~~L~ah~  409 (996)
T KOG0196|consen  331 PPSAPRNLISN-VNGTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCGDNVRFTPRQRGLTETSVTVSDLLAHT  409 (996)
T ss_pred             CCCccceeeee-cccceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCCCCceECCCCCCcccceEEEecccccc
Confidence            57888998776 99999999999997744 466788888876553221       112211     35689999999999


Q ss_pred             EEEEEEEEEcCCCC-C---CCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCC
Q psy8771         687 LYYIWLAAQSPRGE-G---ATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRS  762 (904)
Q Consensus       687 ~Y~v~V~a~~~~G~-~---~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~  762 (904)
                      .|+|.|.|+|+.-. +   .....+.++|....|+ +...++......+++.|+|..|  +.+||.+..|+|.|.+.+.+
T Consensus       410 ~YTFeV~AvNgVS~lsp~~~~~a~vnItt~qa~ps-~V~~~r~~~~~~~sitlsW~~p--~~png~ildYEvky~ek~~~  486 (996)
T KOG0196|consen  410 NYTFEVEAVNGVSDLSPFPRQFASVNITTNQAAPS-PVSVLRQVSRTSDSITLSWSEP--DQPNGVILDYEVKYYEKDED  486 (996)
T ss_pred             ccEEEEEEeecccccCCCCCcceeEEeeccccCCC-ccceEEEeeeccCceEEecCCC--CCCCCcceeEEEEEeecccc
Confidence            99999999997532 2   2234578889888887 4577899999999999999999  68999999999999998642


Q ss_pred             CCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         763 DSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       763 ~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      .  .....+. ..+..+|.+|+|++.|.|+|+|.+..|.|.+|....|.|.+.
T Consensus       487 e--~~~~~~~t~~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~  537 (996)
T KOG0196|consen  487 E--RSYSTLKTKTTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS  537 (996)
T ss_pred             c--cceeEEecccceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence            2  2334444 788999999999999999999999999999999999999875

>cd05762 Ig8_MLCK Eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK)

Probab=99.61  E-value=7.4e-15  Score=122.05  Aligned_cols=91  Identities=20%  Similarity=0.296  Sum_probs=80.9

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEec
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      |.|+..|.+ +.+..|+.+.|.|.+.|.|.|.|.|+|+ +..+..+.++.+    ....|.|.++  +|+|.|+|.|.|.
T Consensus         1 p~~~~~p~~-~~v~~G~~v~l~C~~~G~p~p~v~W~kd-g~~l~~~~~~~~~~~~~~s~L~I~~~~~~D~G~Ytc~a~N~   78 (98)
T cd05762           1 PQIIQFPED-MKVRAGESVELFCKVTGTQPITCTWMKF-RKQIQEGEGIKIENTENSSKLTITEGQQEHCGCYTLEVENK   78 (98)
T ss_pred             CceEECCcC-EEEECCCEEEEEEEEcccCCCceEEEEC-CEEecCCCcEEEEecCCeeEEEECCCChhhCEEEEEEEEcC
Confidence            668888888 9999999999999999999999999999 777766666654    3568999999  6999999999999


Q ss_pred             CcceEEEEEEEEEeecCCCCCCCCCC
Q psy8771         179 LGVIETSTIVKVQCKYAPLLTLPVAP  204 (904)
Q Consensus       179 ~g~~~~~~~l~v~~~~~~~~~~P~~p  204 (904)
                      .|...+++.|.|.       ..|.+|
T Consensus        79 ~G~~~~~~~l~V~-------~~P~pP   97 (98)
T cd05762          79 LGSRQAQVNLTVV-------DKPDPP   97 (98)
T ss_pred             CCceeEEEEEEEe-------cCCCCC
Confidence            9999999999999       788877

Ig8_MLCK: the eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK). MLCK is a key regulator of different forms of cell motility involving actin and myosin II. Agonist stimulation of smooth muscle cells increases cytosolic Ca2+, which binds calmodulin. This Ca2+-calmodulin complex in turn binds to and activates MLCK. Activated MLCK leads to the phosphorylation of the 20 kDa myosin regulatory light chain (RLC) of myosin II and the stimulation of actin-activated myosin MgATPase activity. MLCK is widely present in vertebrate tissues; it phosphorylates the 20 kDa RLC of both smooth and nonmuscle myosin II. Phosphorylation leads to the activation of the myosin motor domain and altered structural properties of myosin II. In smooth muscle MLCK it is involved in initiating contraction. In nonmuscle cells, MLCK may participate in cell division and cell motility; it has

>cd05851 Ig3_Contactin-1 Third Ig domain of contactin-1

Probab=99.60  E-value=6.9e-15  Score=119.80  Aligned_cols=86  Identities=22%  Similarity=0.454  Sum_probs=77.4

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      ||.|...+.+ ..+.+|+.+.|+|.+.|.|.|.|+|+|+ +..+....++...++.|.|.++  +|+|.|+|.|.|..|.
T Consensus         1 ~p~i~~~~~~-~~~~~G~~v~l~C~~~G~P~P~v~W~k~-~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~   78 (88)
T cd05851           1 PADINVKFKD-TYALKGQNVTLECFALGNPVPVIRWRKI-LEPMPATAEISMSGAVLKIFNIQPEDEGTYECEAENIKGK   78 (88)
T ss_pred             CCceEEcccc-EEEeCCCcEEEEEEecccCCCEEEEEEC-CcCCCCCCEEecCCCEEEECcCChhhCEEEEEEEEcCCCc
Confidence            6889999998 9999999999999999999999999999 6677666677677789999999  6999999999999999


Q ss_pred             eEEEEEEEEE
Q psy8771         182 IETSTIVKVQ  191 (904)
Q Consensus       182 ~~~~~~l~v~  191 (904)
                      .+..+.|.|+
T Consensus        79 ~~~~~~l~V~   88 (88)
T cd05851          79 DKHQARVYVQ   88 (88)
T ss_pred             eEEEEEEEEC
Confidence            9999988874

Ig3_Contactin-1: Third Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>KOG4258|consensus

Probab=99.57  E-value=9.4e-14  Score=147.90  Aligned_cols=317  Identities=20%  Similarity=0.336  Sum_probs=204.4

Q ss_pred             CCeEEEecCCceEEEEecCCCCCC-CceeeEEEEEEeCCC-----------CCCcceEEEeecC---------ceEEEEc
Q psy8771         486 RDVQVRPLSSSTMVIQWDEPETPN-GQITGYKVYYTQDQS-----------LPMSAWETQVVDN---------NQLTTIS  544 (904)
Q Consensus       486 ~~l~v~~~~~~~~~l~W~~p~~~~-~~i~~Y~v~~~~~~~-----------~~~~~~~~~~~~~---------~~~~~~~  544 (904)
                      .++.....+.+++.|+|..-...+ .+..+|.++|+...-           -....|.......         ..-+.+.
T Consensus       492 l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~~~~~l~  571 (1025)
T KOG4258|consen  492 LQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTHPGFLLD  571 (1025)
T ss_pred             eeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCccccceecCccccccCcceEEeccCCcCCCccccccceehh
Confidence            355666678889999998833222 367899999986531           1124566554411         2246899


Q ss_pred             CCCCCCeEEEEEEEEeCCCC----CCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccC
Q psy8771         545 DLTPHTIYTIRVQAFTSVGP----GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT  620 (904)
Q Consensus       545 ~L~p~t~Y~~~V~a~~~~g~----~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~  620 (904)
                      +|+|.|.|.+.|++....-.    -..|+...++|....|++|..+-....+++.+.|+|.+|..+||.++.|.|.|..-
T Consensus       572 ~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~PspPl~~ls~snsSsqi~l~W~pP~~pNG~lt~Ylv~wer~  651 (1025)
T KOG4258|consen  572 GLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSPPLDVLSKSNSSSQILLKWKPPSQPNGNLTHYLVVWERQ  651 (1025)
T ss_pred             cCCccceeEEEEeeeehhhhccccccccceEEEEecCCCCCCcchhhhccCcchheeEEecCCCCCCCceeEEEEEEEec
Confidence            99999999999999843221    14688889999999999998887777778899999999999999999999998551


Q ss_pred             C-------------C--------CCcceEEEeec---------------------------------------cceEEEe
Q psy8771         621 Y-------------A--------KPRDLRAVDIQ---------------------------------------ETAVTLA  640 (904)
Q Consensus       621 ~-------------~--------~p~~l~~~~~~---------------------------------------~~~~~l~  640 (904)
                      .             +        .| .+...+..                                       .+.+.+.
T Consensus       652 ~~~~yl~~~nYC~~~~k~p~~~~~p-~~~~ed~d~~~e~e~~~~~Cc~c~~~~~~~~~e~eea~~~~~FEd~L~n~i~vp  730 (1025)
T KOG4258|consen  652 AEDGYLEQRNYCHKGLKLPIRADLP-SFDSEDMDPLLEMEGHTGPCCSCPPTESYPQYEDEEASEQKTFEDFLHNAIFVP  730 (1025)
T ss_pred             cCCchHHHhccccccccccccccCC-CCchhhcchhhhhccCCCCCCCCCcccccCchhhHHHHHHHHHhhhccceeeec
Confidence            0             0        00 00000000                                       0122222


Q ss_pred             ----ccCCCCCCCceeeEEEEEEeCCcc--------------ccc-eEEecccceEEEeCCCCCcEEEEEEEEEcCCCC-
Q psy8771         641 ----WSKPTHSGENIISYELYWNDTYAK--------------AKH-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE-  700 (904)
Q Consensus       641 ----w~~~~~~~~~~~~y~v~~~~~~~~--------------~~~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~-  700 (904)
                          |......  ....+..........              +.. .....+..++.+.+|++.+.|.+.+.|+|..+. 
T Consensus       731 r~~~~krk~l~--~~~n~t~~~~~~~~~~p~t~~~t~p~ei~e~~p~~~n~n~~~~vi~~Lrh~tlY~i~l~aCnh~~~~  808 (1025)
T KOG4258|consen  731 RRPDRKRKSLD--DVENCTRLAPTRKAEEPTTPPTTAPTEIEEPKPRLENGNKESYVISGLRHFTLYRIDLQACNHATPK  808 (1025)
T ss_pred             ccCcccccccc--cccceeeccccccccCCCCCCCCCCccccccCcccccccchhhhhhccccchhhhhhHhhhcccccc
Confidence                2111100  111111111110000              000 001244568899999999999999999998875 


Q ss_pred             ---CCCCCCeeEEecCCCCCCC-CCCcEEEec-CCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec--C
Q psy8771         701 ---GATTPPIPVRTKQYVPGAP-PQNVSCEPL-SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK--N  773 (904)
Q Consensus       701 ---~~~s~~~~~~t~~~~p~~~-P~~l~~~~~-~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~--~  773 (904)
                         |.. ..+..+|.+..-... |..+...-. ..+++.|+|.+|  .+.||.+..|.|.|+..+............  .
T Consensus       809 ~~cS~a-~~v~~RT~~~~~aD~i~g~v~we~~~~~~~v~l~w~EP--~~pNGli~~Y~Vk~r~~~~et~v~cvsR~~~~k  885 (1025)
T KOG4258|consen  809 CGCSHA-AFVFARTMPTMGADDIPGPVTWECHIEMNSVILRWLEP--KEPNGLILNYEVKYRRNGDETHVECVSRMDYAK  885 (1025)
T ss_pred             cccchh-hhhhhccccccccccCCCceeEecccCcceEEEecCCC--CCCCccEEEEEEEEeeccCcchhhhhhhhhhhh
Confidence               322 234555655443332 222222222 779999999999  579999999999999776543322111222  6


Q ss_pred             cceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEe
Q psy8771         774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITI  809 (904)
Q Consensus       774 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~  809 (904)
                      ...+.+.+|.+| .|.++|+|.+-+|.|.+.++..+
T Consensus       886 ~~gv~l~~l~~G-~y~~~vratSlaGng~~t~~~~~  920 (1025)
T KOG4258|consen  886 AGGVYLKRLNPG-NYSVRVRATSLAGNGSWTESVIF  920 (1025)
T ss_pred             cCceEEEecCCC-cEEEEEEEEeeccCCCCcCCcce
Confidence            678889999996 99999999999999998776654

>KOG4194|consensus

Probab=99.56  E-value=1.5e-13  Score=141.10  Aligned_cols=170  Identities=19%  Similarity=0.289  Sum_probs=123.1

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC--CCceee--cceEEEEeee--cCCeEEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP--DDKLPV--GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~--~~~~~~--~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      +...|+|+..|.+ ++...|+.+.|.|.|.|.|.|+|.|.|+||..++.  ..|+.+  ++..+.|.|+  +|.|.|+|+
T Consensus       609 V~~~PsFtktP~d-ltl~tg~mArl~CaAtG~P~PeIawqkdggtdFPAA~eRRl~Vmpedd~f~Itnvk~eD~GiYtC~  687 (873)
T KOG4194|consen  609 VNQAPSFTKTPED-LTLRTGQMARLECAATGHPRPEIAWQKDGGTDFPAARERRLHVMPEDDVFFITNVKIEDQGIYTCT  687 (873)
T ss_pred             eeccCccccCccc-ceeecccceeeeeeccCCCCcceeehhcCCCCCchhhhheeeecCCCCEEEEecccccccceeEEe
Confidence            4788999999999 99999999999999999999999999997776764  345554  7889999999  799999999


Q ss_pred             EEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE--eeccee
Q psy8771         175 AASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE--ISGIIT  252 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~  252 (904)
                      |.|..|+.++++.|.|...  |.+..|..++   ...+ ...+.+++...+.+.+ -++.|......--+..  .....+
T Consensus       688 A~n~AG~isanAtL~V~e~--p~f~~PL~~~---~V~~-get~vlqC~a~~~~a~-pr~~W~k~d~pil~t~rh~f~d~d  760 (873)
T KOG4194|consen  688 AQNVAGQISANATLTVLET--PSFSIPLEDQ---LVVV-GETLVLQCLAEGAPAD-PRLEWFKEDKPILITERHTFPDGD  760 (873)
T ss_pred             eeccccceeeceEEEEecC--Ccccccccce---EEEe-cceEEEEEecCCCCCC-ccccccCCCCceEEeecccCCCCC
Confidence            9999999999999999932  2223333332   2223 3456667766544443 2344444322211111  122333


Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      .-+++.+..-.+.+.|+|.-.|..|.
T Consensus       761 Qllvv~~~~~~daG~yTcem~~~~~~  786 (873)
T KOG4194|consen  761 QLLVVKENLVEDAGIYTCEMSNTLGT  786 (873)
T ss_pred             eEEEEEehhhhhcceEEEEEEeeccc
Confidence            55677777788889999999998775

>cd04968 Ig3_Contactin_like Third Ig domain of contactin

Probab=99.46  E-value=6.6e-13  Score=108.87  Aligned_cols=86  Identities=23%  Similarity=0.484  Sum_probs=72.9

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      ||.|...|.+ ..+.+|+.+.|.|.+.|.|.|.|+|+|+ +..+....+....++.|.|.++  +|+|.|+|.|.|..|.
T Consensus         1 p~~~~~~p~~-~~~~~g~~v~l~C~~~g~P~p~v~W~k~-~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~   78 (88)
T cd04968           1 PSIIVVFPKD-TYALKGQNVTLECFALGNPVPQIKWRKV-DGSMPSSAEISMSGAVLKIPNIQFEDEGTYECEAENIKGK   78 (88)
T ss_pred             CCcEEECCCc-eEEeCCCcEEEEEEeeEeCCCEEEEEEC-CCcCCCccEEEEeCCEEEECCCCcccCEEEEEEEEECCCc
Confidence            4567777777 8899999999999999999999999998 4444444444567789999999  6999999999999999


Q ss_pred             eEEEEEEEEE
Q psy8771         182 IETSTIVKVQ  191 (904)
Q Consensus       182 ~~~~~~l~v~  191 (904)
                      ..+.+.|.|.
T Consensus        79 ~~~~~~l~V~   88 (88)
T cd04968          79 DTHQGRIYVQ   88 (88)
T ss_pred             EEEEEEEEEC
Confidence            9999988773

Ig3_Contactin_like: Third Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd05728 Ig4_Contactin-2-like Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins

Probab=99.45  E-value=5.1e-13  Score=108.32  Aligned_cols=82  Identities=26%  Similarity=0.462  Sum_probs=73.2

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIET  184 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~  184 (904)
                      |...|.+ ..+..|+++.|.|.+.|.|.|.+.|+|+ +..+....++...++.|.|.++  +|+|.|+|.|.|..|...+
T Consensus         2 ~~~~p~~-~~~~~G~~~~l~C~~~g~p~p~v~W~k~-g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~   79 (85)
T cd05728           2 WLKVISD-TEADIGSSLRWECKASGNPRPAYRWLKN-GQPLASENRIEVEAGDLRITKLSLSDSGMYQCVAENKHGTIYA   79 (85)
T ss_pred             ccccCCc-cEEcCCCcEEEEEEeeEeCCCEEEEEEC-CEECCCCCeEEEeCCEEEEeeCCHHHCEEEEEEEECCCCeEEE
Confidence            4566777 9999999999999999999999999999 7777777778888889999999  6999999999999999998


Q ss_pred             EEEEEE
Q psy8771         185 STIVKV  190 (904)
Q Consensus       185 ~~~l~v  190 (904)
                      ++.|.|
T Consensus        80 ~~~l~V   85 (85)
T cd05728          80 SAELAV   85 (85)
T ss_pred             EEEEEC
Confidence            888765

Ig4_Contactin-2-like: fourth Ig domain of the neural cell adhesion molecule contactin-2. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (aliases TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. The first four Ig domains form the intermolecular binding fragment which arranges as a compact U-shaped module by contacts between Ig domains 1 and 4, and domains 2 and 3. It has been proposed that a linear zipper-like array forms, from contactin-2 molecules alternatively provided by the two apposed membranes.

>cd05852 Ig5_Contactin-1 Fifth Ig domain of contactin-1

Probab=99.44  E-value=3.9e-13  Score=104.48  Aligned_cols=70  Identities=20%  Similarity=0.477  Sum_probs=62.4

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      |+++.|+|.+.|.|.|+|+|+|+ +..+..+.|+.+ .+++|.|.++  +|+|.|+|.|.|..|...+++.|.|
T Consensus         1 G~~~~l~C~~~g~P~p~v~W~k~-~~~l~~~~r~~~~~~g~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~~   73 (73)
T cd05852           1 GGRVIIECKPKAAPKPKFSWSKG-TELLVNNSRISIWDDGSLEILNITKLDEGSYTCFAENNRGKANSTGVLSV   73 (73)
T ss_pred             CCeEEEEEecceeCCCEEEEEeC-CEecccCCCEEEcCCCEEEECcCChhHCEEEEEEEECCCCceeEEEEEEC
Confidence            68899999999999999999999 666666677776 6789999999  6999999999999999999988865

Ig5_Contactin-1: fifth Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>cd05739 Ig3_RPTP_IIa_LAR_like Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

Probab=99.44  E-value=5.5e-13  Score=102.41  Aligned_cols=68  Identities=59%  Similarity=1.042  Sum_probs=60.4

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEEEEEecCcceEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      |+.++|+|.+.|.|.|.|+|+|+ +..+....++......|.|.+++|+|.|+|.|.|..|..++++.|
T Consensus         1 G~~v~L~C~a~G~P~P~v~W~k~-g~~l~~~~~~~~~~~~L~i~~~~d~G~Y~C~A~N~~G~~~~~a~l   68 (69)
T cd05739           1 GGSVNLTCVAVGAPMPYVKWMKG-GEELTKEDEMPVGRNVLELTNIYESANYTCVAISSLGMIEATAQV   68 (69)
T ss_pred             CCeEEEEEEeeecCCCEEEEEEC-CEECCCccceecCccEEEEeccccCeeEEEEEEeCCCEEEEEEEE
Confidence            67899999999999999999999 666766666766777899999999999999999999998888766

Ig3_RPTP_IIa_LAR_like: domain similar to the third immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple IG-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains. Included in this group is Drosophila LAR (DLAR).

>cd05747 Ig5_Titin_like M5, fifth immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins

Probab=99.42  E-value=1.5e-12  Score=107.66  Aligned_cols=84  Identities=20%  Similarity=0.416  Sum_probs=73.0

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      .||+|+..|.+ +.+.+|+.+.|.|.+.|.|.|.+.|+|+ +..+..+.++.+    ..++|.|.++  +|+|.|+|.|.
T Consensus         2 ~~~~~~~~p~~-~~~~~G~~~~L~C~~~g~P~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~   79 (92)
T cd05747           2 LPATILTKPRS-LTVSEGESARFSCDVDGEPAPTVTWMRE-GQIIVSSQRHQITSTEYKSTFEISKVQMSDEGNYTVVVE   79 (92)
T ss_pred             CCCcccccCcc-EEEeCCCcEEEEEEEeecCCCEEEEEEC-CEECCCCCcEEEEEcCCeeEEEECCCCcccCEeEEEEEE
Confidence            47899999988 9999999999999999999999999999 666666666554    2468999999  69999999999


Q ss_pred             ecCcceEEEEEE
Q psy8771         177 SVLGVIETSTIV  188 (904)
Q Consensus       177 n~~g~~~~~~~l  188 (904)
                      |..|..+....|
T Consensus        80 N~~G~~~~~~~l   91 (92)
T cd05747          80 NSEGKQEAQFTL   91 (92)
T ss_pred             cCCCCEeEEEEe
Confidence            999998887665

Ig5_Titin_like: domain similar to the M5, fifth immunoglobulin (Ig)-like domain from the human titin C terminus. Titin (also called connectin) is a fibrous sarcomeric protein specifically found in vertebrate striated muscle. Titin is gigantic; depending on isoform composition it ranges from 2970 to 3700 kDa, and is of a length that spans half a sarcomere. Titin largely consists of multiple repeats of Ig-like and fibronectin type 3 (FN-III)-like domains. Titin connects the ends of myosin thick filaments to Z disks and extends along the thick filament to the H zone, and appears to function similar to an elastic band, keeping the myosin filaments centered in the sarcomere during muscle contraction or stretching.

>cd05745 Ig3_Peroxidasin Third immunoglobulin (Ig)-like domain of peroxidasin

Probab=99.40  E-value=1.4e-12  Score=102.66  Aligned_cols=71  Identities=27%  Similarity=0.563  Sum_probs=61.6

Q ss_pred             cCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee-ecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         119 LDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP-VGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      +|+.+.|.|.+.|.|.|.|+|+|+ +..+....++. ..++.|.|.++  +|+|.|+|.|.|..|..+..+.|.|
T Consensus         1 eG~~v~l~C~~~g~P~p~i~W~k~-g~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~L~V   74 (74)
T cd05745           1 EGQTVDFLCEAQGYPQPVIAWTKG-GSQLSVDRRHLVLSSGTLRISRVALHDQGQYECQAVNIVGSQRTVAQLTV   74 (74)
T ss_pred             CCCeEEEEeECCEecCCEEEEEEC-CEECCCCCCeEEccCCeEEEeeCCHHhCEEEEEEEEeCCCceeEEEEEeC
Confidence            589999999999999999999999 66666555544 36779999999  6999999999999999999888865

Ig3_Peroxidasin: the third immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells which have undergone programmed cell death, and protection of the organism against non-self.

>cd05749 Ig2_Tyro3_like Second immunoglobulin (Ig)-like domain of Axl/Tyro3 receptor tyrosine kinases (RTKs)

Probab=99.38  E-value=2.3e-12  Score=101.95  Aligned_cols=74  Identities=31%  Similarity=0.629  Sum_probs=61.9

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEEEEEecCcceEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIET  184 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c~a~n~~g~~~~  184 (904)
                      |...|.+ +.+.+|+++.|.|.+.|.|.| +|+|+|+ +..+..  +.....+.|.|.++.|.|.|+|.|.|..|...+
T Consensus         1 f~~~P~~-~~v~~G~~v~l~C~a~G~P~P~~I~W~k~-g~~l~~--~~~~~~s~L~i~~~~d~g~Y~C~A~N~~G~~~s   75 (81)
T cd05749           1 FTVEPED-LSVTANTPFNLTCQAVGPPEPVEILWWQG-GSPLGD--PPAPSPSVLNVPGLNETSKFSCEAHNAKGVTTS   75 (81)
T ss_pred             CcCCCCc-eEEcCCCCEEEEEEeeeecCCeEEEEEEC-CEECCC--CCCCCCCEEEEccccCCeEEEEEEEeccCcEEe
Confidence            3456677 999999999999999999999 7999999 666643  233456789999999999999999999997554

Ig2_Tyro3_like: the second immunoglobulin (Ig)-like domain in the Axl/Tyro3 family of receptor tyrosine kinases (RTKs). This family includes Axl (also known as Ark, Ufo, and Tyro7), Tyro3 (also known as Sky, Rse, Brt, Dtk, and Tif), and Mer (also known as Nyk, c-Eyk, and Tyro12). Axl/Tyro3 family receptors have an extracellular portion with two Ig-like domains followed by two fibronectin-types III (FNIII) domains, a membrane-spanning single helix, and a cytoplasmic tyrosine kinase domain. Axl, Tyro3 and Mer are widely expressed in adult tissues, though they show higher expression in the brain, in the lymphatic and vascular systems, and in the testis. Axl, Tyro3, and Mer bind the vitamin K dependent protein Gas6 with high affinity, and in doing so activate their tyrosine kinase activity. Axl/Gas6 signaling may play a part in cell adhesion processes, prevention of apoptosis, and c

>cd05735 Ig8_DSCAM Eight immunoglobulin (Ig) domain of Down Syndrome Cell Adhesion molecule (DSCAM)

Probab=99.37  E-value=4.3e-12  Score=103.23  Aligned_cols=77  Identities=23%  Similarity=0.395  Sum_probs=64.3

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccCCC-Cceeec-----c---eEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPVG-----R---NVLTLDRV--TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~-----~---~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      |+.++|.|.+.|.|.+.|.|+|+ +..+... .|+.+.     .   ..|.|.++  +|.|.|+|.|.|..|..++.+.|
T Consensus         1 g~~~~l~C~~~g~p~~~i~W~k~-~~~i~~~~~r~~~~~~~~~~~~~s~L~I~~~~~~D~G~YtC~A~N~~G~~~~~~~L   79 (88)
T cd05735           1 GQKKEMSCTAHGEKPIIVRWEKE-DRIINPEMSRYLVSTKEVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQL   79 (88)
T ss_pred             CCeEEEEEEEECCCCCEEEEeeC-CEECCCCCCcEEEEEecCCCcEEEEEEECCCCcccCEEEEEEEEcCCCcceEEEEE
Confidence            78999999999999999999999 6556432 354431     1   57889888  69999999999999999999999


Q ss_pred             EEEeecCCCCCCCCCC
Q psy8771         189 KVQCKYAPLLTLPVAP  204 (904)
Q Consensus       189 ~v~~~~~~~~~~P~~p  204 (904)
                      .|.       .+|.+|
T Consensus        80 ~V~-------~~P~~P   88 (88)
T cd05735          80 TVQ-------EPPDPP   88 (88)
T ss_pred             EEe-------CCCCCC
Confidence            999       777776

Ig8_DSCAM: the eight immunoglobulin (Ig) domain of Down Syndrome Cell Adhesion molecule (DSCAM). DSCAM is a cell adhesion molecule expressed largely in the developing nervous system. The gene encoding DSCAM is located at human chromosome 21q22, the locus associated with the mental retardation phenotype of Down Syndrome. DSCAM is predicted to be the largest member of the IG superfamily. It has been demonstrated that DSCAM can mediate cation-independent homophilic intercellular adhesion.

>cd05893 Ig_Palladin_C C-terminal immunoglobulin (Ig)-like domain of palladin

Probab=99.37  E-value=2.3e-12  Score=100.72  Aligned_cols=67  Identities=25%  Similarity=0.491  Sum_probs=55.7

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCC-CCceeec-c--e--EEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPVG-R--N--VLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~~-~--~--~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      +.|+|.+.|.|.|.|+|+|+ +..+.. ..|+.+. +  +  .|.|.++  +|+|.|+|.|.|..|+.++++.|.|
T Consensus         1 v~l~C~v~G~P~P~v~W~k~-~~~l~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V   75 (75)
T cd05893           1 VRLECRVSGVPHPQIFWKKE-NESLTHNTDRVSMHQDNCGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDV   75 (75)
T ss_pred             CEEEEEEeEecCCEEEEEEC-CEECCCCCCeEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEEEEEeC
Confidence            57999999999999999999 555543 4566552 2  2  6999999  6999999999999999999998875

Ig_Palladin_C: C-terminal immunoglobulin (Ig)-like domain of palladin. Palladin belongs to the palladin-myotilin-myopalladin family. Proteins belonging to this family contain multiple Ig-like domains and function as scaffolds, modulating actin cytoskeleton. Palladin binds to alpha-actinin ezrin, vasodilator-stimulated phosphoprotein VASP, SPIN90 (DIP, mDia interacting protein), and Src. Palladin also binds F-actin directly, via its Ig3 domain. Palladin is expressed as several alternatively spliced isoforms, having various combinations of Ig-like domains, in a cell-type-specific manner. It has been suggested that palladin's different Ig-like domains may be specialized for distinct functions.

>cd05894 Ig_C5_MyBP-C C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)

Probab=99.36  E-value=5.5e-12  Score=101.97  Aligned_cols=76  Identities=24%  Similarity=0.427  Sum_probs=64.7

Q ss_pred             ceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceee----cceEEEEeee--cCCeEEEEEEEecCcceEEEE
Q psy8771         114 LLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV----GRNVLTLDRV--TESENYTCIAASVLGVIETST  186 (904)
Q Consensus       114 ~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~  186 (904)
                      .+.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+.. ..|+.+    ....|.|.++  +|+|.|+|.|.|..|+..+.+
T Consensus         4 ~~~v~~G~~v~l~c~~~G~P~P~v~W~k~-~~~i~~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a~N~~G~~~~~~   82 (86)
T cd05894           4 TIVVVAGNKLRLDVPISGEPAPTVTWSRG-DKAFTETEGRVRVESYKDLSSFVIEGAEREDEGVYTITVTNPVGEDHASL   82 (86)
T ss_pred             EEEEEcCCEEEEEeeEeecCCCeEEEEEC-CEECccCCCeEEEEEcCCeEEEEECCCccCcCEEEEEEEEeCCCcEEEEE
Confidence            48899999999999999999999999999 666654 345554    2468999999  699999999999999988888


Q ss_pred             EEEE
Q psy8771         187 IVKV  190 (904)
Q Consensus       187 ~l~v  190 (904)
                      .|.|
T Consensus        83 ~l~V   86 (86)
T cd05894          83 FVKV   86 (86)
T ss_pred             EEEC
Confidence            7764

Ig_C5_MyBP_C : the C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C). MyBP_C consists of repeated domains, Ig and fibronectin type 3, and various linkers. Three isoforms of MYBP_C exist and are included in this group: cardiac(c), and fast and slow skeletal muscle (s) MyBP_C. cMYBP_C has insertions between and inside domains and an additional cardiac-specific Ig domain at the N-terminus. For cMYBP_C an interaction has been demonstrated between this C5 domain and the Ig C8 domain.

>cd05892 Ig_Myotilin_C C-terminal immunoglobulin (Ig)-like domain of myotilin

Probab=99.35  E-value=4e-12  Score=99.06  Aligned_cols=67  Identities=22%  Similarity=0.429  Sum_probs=56.2

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccC-CCCceee--c-ce--EEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELT-PDDKLPV--G-RN--VLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~-~~~~~~~--~-~~--~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      +.|+|.+.|.|.|.|+|+|+ +..+. ...|+.+  + .+  +|.|.++  +|+|.|+|.|.|..|.....+.|.|
T Consensus         1 v~l~C~v~G~P~P~i~W~k~-~~~i~~~~~r~~~~~~~~g~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~~a~L~V   75 (75)
T cd05892           1 VKLECQISAIPPPKIFWKRN-NEMVQYNTDRISLYQDNSGRVTLLIKNVNKKDAGWYTVSAVNEAGVATCHARLDV   75 (75)
T ss_pred             CEEEEEEEecCCCeEEEEEC-CEECcCCCCeEEEEEcCCCcEEEEECCCChhhCEEEEEEEEcCcCeEEEEEEEeC
Confidence            57999999999999999999 66665 3456654  2 22  7999999  6999999999999999999998875

Ig_Myotilin_C: C-terminal immunoglobulin (Ig)-like domain of myotilin. Mytolin belongs to the palladin-myotilin-myopalladin family. Proteins belonging to the latter family contain multiple Ig-like domains and function as scaffolds, modulating actin cytoskeleton. Myotilin is most abundant in skeletal and cardiac muscle, and is involved in maintaining sarcomere integrity. It binds to alpha-actinin, filamin and actin. Mutations in myotilin lead to muscle disorders.

>cd05867 Ig4_L1-CAM_like Fourth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=99.35  E-value=5.2e-12  Score=99.99  Aligned_cols=70  Identities=23%  Similarity=0.421  Sum_probs=61.1

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccCCC---CceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPD---DKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~---~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      |+.+.|.|.+.|.|.|.|+|+|+ +..+...   .++...++.|.|.++  +|+|.|+|.|.|..|...+.+.|.|
T Consensus         1 G~~v~l~C~~~G~P~p~i~W~k~-g~~i~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V   75 (76)
T cd05867           1 GETARLDCQVEGIPTPNITWSIN-GAPIEGTDPDPRRHVSSGALILTDVQPSDTAVYQCEARNRHGNLLANAHVHV   75 (76)
T ss_pred             CCeEEEEEEeeEeCCCeEEEEEC-CEECCCCCCCceEEeeCCEEEECCCChhhCEEEEEEEECCCCeEEEEEEEEE
Confidence            68899999999999999999999 6665432   356667889999999  6999999999999999999988876

Ig4_L1-CAM_like: fourth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM.

>cd05870 Ig5_NCAM-2 Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-2 (also known as OCAM/mamFas II and RNCAM)

Probab=99.34  E-value=8.7e-12  Score=104.40  Aligned_cols=86  Identities=27%  Similarity=0.526  Sum_probs=68.8

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccccCC-----CCceee----cceEEEEeee--cCCeE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIELTP-----DDKLPV----GRNVLTLDRV--TESEN  170 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~~~-----~~~~~~----~~~~l~i~~l--~d~g~  170 (904)
                      ++|+|.. +.+ +.+.+|+.++|.|.+.|.|.|.|.|+|+. +..+..     +.|+.+    ...+|.|.++  +|+|.
T Consensus         1 ~~p~i~~-~~~-~~~~~G~~v~l~C~~~G~P~p~i~W~k~~~g~~~~~~~~~~~~r~~v~~~~~~~~L~I~~v~~~D~G~   78 (98)
T cd05870           1 VQPHIIQ-LKN-ETTVENGAATLSCKAEGEPIPEITWKRASDGHTFSEGDKSPDGRIEVKGQHGESSLHIKDVKLSDSGR   78 (98)
T ss_pred             CCCEEEe-ecc-EEEcCCCcEEEEEecccCCCCeEEEEECCCCceeccCCcCcCceEEEeecCCeeEEEEeeCCcCCCEE
Confidence            3678865 556 99999999999999999999999999952 333321     235554    2458999999  69999


Q ss_pred             EEEEEEecCcceEEEEEEEE
Q psy8771         171 YTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       171 Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      |+|.|.|..|....++.|.|
T Consensus        79 Y~C~A~N~~G~~~~~~~l~~   98 (98)
T cd05870          79 YDCEAASRIGGHQKSMYLDI   98 (98)
T ss_pred             EEEEEeccCCcceeEEEEeC
Confidence            99999999999888888764

Ig5_NCAM-2: the fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-2 (also known as OCAM/mamFas II and RNCAM). NCAM-2 is organized similarly to NCAM , including five N-terminal Ig-like domains and two fibronectin type III domains. NCAM-2 is differentially expressed in the developing and mature olfactory epithelium (OE), and may function like NCAM, as an adhesion molecule.

>cd04972 Ig_TrkABC_d4 Fourth domain (immunoglobulin-like) of Trk receptors TrkA, TrkB and TrkC

Probab=99.34  E-value=1e-11  Score=102.12  Aligned_cols=81  Identities=26%  Similarity=0.363  Sum_probs=66.2

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee----ecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP----VGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~----~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      ..+|.+ ..+.+|+.+.|.|.+.|.|.|.|+|+++ +..+....+..    .....|.|.++  +|.|.|+|.|.|..|.
T Consensus         4 v~~p~~-~~v~~G~~v~l~C~~~G~P~p~v~W~~~-g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~g~Y~C~A~N~~G~   81 (90)
T cd04972           4 VDGPNA-TVVYEGGTATIRCTAEGSPLPKVEWIIA-GLIVIQTRTDTLETTVDIYNLQLSNITSETQTTVTCTAENPVGQ   81 (90)
T ss_pred             ccCCcC-EEEcCCCcEEEEEEEEEcCCCeEEEEEC-CEEccCCccEEEEecCCEEEEEEecCCcccCEEEEEEEECCCCc
Confidence            445566 7799999999999999999999999999 65554443322    23458999999  6899999999999999


Q ss_pred             eEEEEEEEE
Q psy8771         182 IETSTIVKV  190 (904)
Q Consensus       182 ~~~~~~l~v  190 (904)
                      ..+.+.|.|
T Consensus        82 ~~~~~~L~v   90 (90)
T cd04972          82 ANVSVQVTV   90 (90)
T ss_pred             eeEEEEEeC
Confidence            999888764

TrkABC_d4: the fourth domain of Trk receptors TrkA, TrkB and TrkC, this is an immunoglobulin (Ig)-like domain which binds to neurotrophin. The Trk family of receptors are tyrosine kinase receptors. They are activated by dimerization, leading to autophosphorylation of intracellular tyrosine residues, and triggering the signal transduction pathway. TrkA, TrkB, and TrkC share significant sequence homology and domain organization. The first three domains are leucine-rich domains. The fourth and fifth domains are Ig-like domains playing a part in ligand binding. TrkA, Band C mediate the trophic effects of the neurotrophin Nerve growth factor (NGF) family. TrkA is recognized by NGF. TrKB is recognized by brain-derived neurotrophic factor (BDNF) and neurotrophin (NT)-4. TrkC is recognized by NT-3. NT-3 is promiscuous as in some cell systems it activates TrkA and TrkB receptors. TrkA is a receptor fo

>cd05723 Ig4_Neogenin Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins

Probab=99.34  E-value=6.3e-12  Score=97.79  Aligned_cols=68  Identities=25%  Similarity=0.506  Sum_probs=57.7

Q ss_pred             CeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         122 PLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       122 ~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      ++.|+|.+.|.|.|.|+|+|+ +..+....++.+ .++.|.|.++  +|+|.|+|.|.|..|+.++++.|.|
T Consensus         1 ~v~l~C~~~G~P~p~v~W~k~-g~~~~~~~~~~~~~~~~l~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~L~V   71 (71)
T cd05723           1 DVIFECEVTGKPTPTVKWVKN-GDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNVQASAQLII   71 (71)
T ss_pred             CEEEEEEEEEeCCCEEEEEEC-CeECCCCCCEEEEecCCEEEEcCCcccCEEEEEEEEcCCCEEEEEEEEEC
Confidence            478999999999999999999 555655555554 5677899898  6999999999999999999988865

Ig4_Neogenin: fourth immunoglobulin (Ig)-like domain in neogenin and related proteins. Neogenin is a cell surface protein which is expressed in the developing nervous system of vertebrate embryos in the growing nerve cells. It is also expressed in other embryonic tissues, and may play a general role in developmental processes such as cell migration, cell-cell recognition, and tissue growth regulation. Included in this group is the tumor suppressor protein DCC, which is deleted in colorectal carcinoma . DCC and neogenin each have four Ig-like domains followed by six fibronectin type III domains, a transmembrane domain, and an intracellular domain.

>cd05868 Ig4_NrCAM Fourth immunoglobulin (Ig)-like domain of NrCAM (NgCAM-related cell adhesion molecule)

Probab=99.33  E-value=7e-12  Score=98.89  Aligned_cols=70  Identities=23%  Similarity=0.439  Sum_probs=59.5

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccCCC---CceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPD---DKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~---~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      |+++.|.|.+.|.|.|+|+|+|+ +..+...   .....+++.|.|.++  +|+|.|+|.|.|..|...+++.|.|
T Consensus         1 g~~~~l~C~a~G~P~P~i~W~k~-g~~i~~~~~~~~~~~~~~~l~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v   75 (76)
T cd05868           1 GEDGTLICRANGNPKPSISWLTN-GVPIEIAPTDPSRKVDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNV   75 (76)
T ss_pred             CCCEEEEEEeeEeCCCeEEEEEC-CEEccccCCCceEEecCCEEEECCCCHhhCEEEEEEEEcCCCEEEEEEEEEe
Confidence            68999999999999999999999 7666432   223345668999998  6999999999999999999999887

Ig4_ NrCAM: fourth immunoglobulin (Ig)-like domain of NrCAM (NgCAM-related cell adhesion molecule). NrCAM belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six IG-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. NrCAM is primarily expressed in the nervous system.

>cd05737 Ig_Myomesin_like_C C-temrinal immunoglobulin (Ig)-like domain of myomesin and M-protein

Probab=99.33  E-value=9.7e-12  Score=102.67  Aligned_cols=75  Identities=29%  Similarity=0.468  Sum_probs=63.7

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--c---ceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--G---RNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~---~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      +++.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+  .   ..+|.|.++  +|+|.|+|.|.|..|.......
T Consensus        11 v~v~~G~~v~L~C~v~G~P~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~   89 (92)
T cd05737          11 VTIMEGKTLNLTCTVFGDPDPEVSWLKN-DQALALSDHYNVKVEQGKYASLTIKGVSSEDSGKYGIVVKNKYGGETVDVT   89 (92)
T ss_pred             EEEeCCCcEEEEEEEEecCCCeEEEEEC-CEECccCCCEEEEEcCCCEEEEEEccCChhhCEEEEEEEEECCCcceEEEE
Confidence            8999999999999999999999999999 767766555443  2   347999999  6999999999999999888776


Q ss_pred             EEE
Q psy8771         188 VKV  190 (904)
Q Consensus       188 l~v  190 (904)
                      |.|
T Consensus        90 v~v   92 (92)
T cd05737          90 VSV   92 (92)
T ss_pred             EeC
Confidence            654

Ig_Myomesin_like_C: domain similar to the C-temrinal immunoglobulin (Ig)-like domain of myomesin and M-protein. Myomesin and M-protein are both structural proteins localized to the M-band, a transverse structure in the center of the sarcomere, and are candidates for M-band bridges. Both proteins are modular, consisting mainly of repetitive Ig-like and fibronectin type III (FnIII) domains. Myomesin is expressed in all types of vertebrate striated muscle; M-protein has a muscle-type specific expression pattern. Myomesin is present in both slow and fast fibers; M-protein is present only in fast fibers. It has been suggested that myomesin acts as a molecular spring with alternative splicing as a means of modifying its elasticity.

>cd05869 Ig5_NCAM-1 Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)

Probab=99.32  E-value=1.3e-11  Score=103.13  Aligned_cols=85  Identities=25%  Similarity=0.537  Sum_probs=68.2

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-----Cceee----cceEEEEeee--cCCeEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-----DKLPV----GRNVLTLDRV--TESENYT  172 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-----~~~~~----~~~~l~i~~l--~d~g~Y~  172 (904)
                      .|+|...+.. ..+..|+.++|.|.+.|.|.|.|+|+++ +..+...     .++.+    ..+.|.|.++  +|+|.|+
T Consensus         2 ~p~i~~~~~~-~~~~~g~~v~l~C~~~G~P~P~v~W~~~-~~~~~~~~~~~~~~~~v~~~~~~~~L~I~~v~~~D~G~Y~   79 (97)
T cd05869           2 KPKITYVENQ-TAMELEEQITLTCEASGDPIPSITWRTS-TRNISSEEKTLDGHIVVRSHARVSSLTLKYIQYTDAGEYL   79 (97)
T ss_pred             CceEEEccCc-eEEEcCCCEEEEEEeeEeCCCEEEEEEC-CccccCCccccCccEEEEcCccEEEEEEecCccCcCEEEE
Confidence            5778777776 6666789999999999999999999998 5544322     23332    2358999998  6999999


Q ss_pred             EEEEecCcceEEEEEEEE
Q psy8771         173 CIAASVLGVIETSTIVKV  190 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v  190 (904)
                      |.|.|..|..++++.|.|
T Consensus        80 C~A~N~~G~~~~~~~l~v   97 (97)
T cd05869          80 CTASNTIGQDSQSMYLEV   97 (97)
T ss_pred             EEEecCCCCeeEEEEEEC
Confidence            999999999999888875

Ig5_NCAM-1: The fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM) and heterophilic (NCAM-non-NCAM) interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (tr

>cd05849 Ig1_Contactin-1 First Ig domain of contactin-1

Probab=99.32  E-value=1.2e-11  Score=101.57  Aligned_cols=83  Identities=22%  Similarity=0.538  Sum_probs=65.5

Q ss_pred             CCeEEcCCCCceEEecC---CCeEEEEEEccCCCCeEEEeeCCccccC-CCCceeecceEEEEeee---cCCeEEEEEEE
Q psy8771         104 PPQFSIPPPALLEVMLD---SPLNLSCVAVGSPMPFVKWRKGQNIELT-PDDKLPVGRNVLTLDRV---TESENYTCIAA  176 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g---~~~~l~C~~~g~p~p~i~W~k~~~~~~~-~~~~~~~~~~~l~i~~l---~d~g~Y~c~a~  176 (904)
                      +|.|...|.+ +.+.++   ..+.|.|.+.|.|.|.|+|+|+ +..+. ...++.+.++.|.|.++   +|+|.|+|.|.
T Consensus         1 ~P~f~~~P~~-~~~~~~~~~~~v~l~C~a~G~P~P~i~W~k~-~~~i~~~~~~~~~~~g~L~I~~~~~~~D~G~Y~C~A~   78 (93)
T cd05849           1 GPVFEEQPID-TIYPEESTEGKVSVNCRARANPFPIYKWRKN-NLDIDLTNDRYSMVGGNLVINNPDKYKDAGRYVCIVS   78 (93)
T ss_pred             CCEEEECCCC-EEecCCccCCeEEEeCcCccCCCCEEEEEEC-CEEccCCCCeEEEECCEEEECcCCcCCCCEEEEEEEE
Confidence            4778888887 655544   4899999999999999999999 55553 34567677889999886   59999999999


Q ss_pred             ecCcceEE-EEEE
Q psy8771         177 SVLGVIET-STIV  188 (904)
Q Consensus       177 n~~g~~~~-~~~l  188 (904)
                      |..|...+ .+.|
T Consensus        79 N~~G~~~s~~a~l   91 (93)
T cd05849          79 NIYGKVRSREATL   91 (93)
T ss_pred             eCcceEEEccEEE
Confidence            99998644 4443

Ig1_Contactin-1: First Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may, through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>cd05730 Ig3_NCAM-1_like Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)

Probab=99.32  E-value=1.6e-11  Score=102.50  Aligned_cols=86  Identities=27%  Similarity=0.450  Sum_probs=69.9

Q ss_pred             CCeEEcCCC--CceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-Cceee--cceEEEEeee--cCCeEEEEEEE
Q psy8771         104 PPQFSIPPP--ALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPV--GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       104 ~P~~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~--~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ||.|...+.  + +.+..|+.+.|.|.+.|.|.|.|.|+|+ +..+... .++..  ....|.|.++  +|+|.|+|.|.
T Consensus         1 pp~i~~~~~~~~-~~~~~G~~v~L~C~~~g~P~p~v~W~k~-g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~   78 (95)
T cd05730           1 PPTIRARQSEVN-ATANLGQSVTLACDADGFPEPTMTWTKD-GEPIESGEEKYSFNEDGSEMTILDVDKLDEAEYTCIAE   78 (95)
T ss_pred             CCccccCCcccc-eEEeCCCCEEEEEeccEeCCCEEEEEEC-CEECcCCCCEEEEeCCCCEEEECCCChhhCEEEEEEEE
Confidence            455554432  3 6889999999999999999999999999 6666543 44443  3457999999  69999999999


Q ss_pred             ecCcceEEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKVQ  191 (904)
Q Consensus       177 n~~g~~~~~~~l~v~  191 (904)
                      |..|..+..+.|.|.
T Consensus        79 N~~G~~~~~~~L~V~   93 (95)
T cd05730          79 NKAGEQEAEIHLKVF   93 (95)
T ss_pred             cCCCeEEEEEEEEEE
Confidence            999999999999886

Ig3_NCAM-1_like: domain similar to the third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-non-NCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1,and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the

>PF07679 I-set: Immunoglobulin I-set domain; InterPro: IPR013098 The basic structure of immunoglobulin (Ig) molecules is a tetramer of two light chains and two heavy chains linked by disulphide bonds

Probab=99.31  E-value=1.1e-11  Score=102.69  Aligned_cols=84  Identities=30%  Similarity=0.568  Sum_probs=74.0

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEec
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      |.|...+.+ +.+.+|+++.|.|.+.|.|.|.|.|+++ +..+..+.++.+    ....|.|.++  +|+|.|+|.|.|.
T Consensus         1 P~~~~~~~~-~~v~~G~~~~l~c~~~~~p~~~v~W~~~-~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~   78 (90)
T PF07679_consen    1 PVFTKKPKD-VTVKEGESVTLECEVSGNPPPTVTWYKN-GRPLTSSQRYQIESDGGSSSLTIKNVTREDAGTYTCVASNS   78 (90)
T ss_dssp             EEEEEESSE-EEEETTSEEEEEEEEEESSSSEEEEEET-TEEEESSSSEEEEEETTEEEEEESSESGGGSEEEEEEEEET
T ss_pred             CEEEEecCC-EEEeCCCEEEEEEEEEeCCCCccccccc-ccceeeeeeeeeecccceeEEccCCCChhhCEEEEEEEEEC
Confidence            678888877 9999999999999999999999999999 777776666654    4668999999  6999999999999


Q ss_pred             CcceEEEEEEEE
Q psy8771         179 LGVIETSTIVKV  190 (904)
Q Consensus       179 ~g~~~~~~~l~v  190 (904)
                      .|..+..+.|.|
T Consensus        79 ~g~~~~~~~l~V   90 (90)
T PF07679_consen   79 SGEATASVNLTV   90 (90)
T ss_dssp             TEEEEEEEEEEE
T ss_pred             CCEEEEEEEEEC
Confidence            999998888875

There are two types of light chains: kappa and lambda, each composed of a constant domain (CL) and a variable domain (VL). There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are highly modular proteins, in which the variable and constant domains have clear, conserved sequence patterns. The domains in Ig and Ig-like molecules are grouped into four types: V-set (variable; IPR013106 from INTERPRO), C1-set (constant-1; IPR003597 from INTERPRO), C2-set (constant-2; IPR008424 from INTERPRO) and I-set (intermediate; IPR013098 from INTERPRO) []. Structural studies have shown that these domains share a common core Greek-key beta-sandwich structure, with the types differing in the number of strands in the beta-sheets as well as in their sequence patterns [, ]. Immunoglobulin-like domains that are related in both sequence and structure can be found in several diverse protein families. Ig-like domains are involved in a variety of functions, including cell-cell recognition, cell-surface receptors, muscle structure and the immune system []. This entry represents I-set domains, which are found in several cell adhesion molecules, including vascular (VCAM), intercellular (ICAM), neural (NCAM) and mucosal addressin (MADCAM) cell adhesion molecules, as well as junction adhesion molecules (JAM). I-set domains are also present in several other diverse protein families, including several tyrosine-protein kinase receptors, the hemolymph protein hemolin, the muscle proteins titin, telokin, and twitchin, the neuronal adhesion molecule axonin-1 [], and the signalling molecule semaphorin 4D that is involved in axonal guidance, immune function and angiogenesis [].; PDB: 3MTR_A 2EDK_A 3DMK_B 1KOA_A 3NCM_A 2NCM_A 2V9Q_A 2CR3_A 3QQN_A 3QR2_A ....

>cd04975 Ig4_SCFR_like Fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR) and similar proteins

Probab=99.31  E-value=2.6e-11  Score=100.70  Aligned_cols=76  Identities=25%  Similarity=0.267  Sum_probs=65.4

Q ss_pred             eEEecCCCeEEEEEEcc-CCCCeEEEeeCCccccCCCCcee-e-c-------ceEEEEeee--cCCeEEEEEEEecCcce
Q psy8771         115 LEVMLDSPLNLSCVAVG-SPMPFVKWRKGQNIELTPDDKLP-V-G-------RNVLTLDRV--TESENYTCIAASVLGVI  182 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~~~~-~-~-------~~~l~i~~l--~d~g~Y~c~a~n~~g~~  182 (904)
                      +.+.+|+++.|+|.+.| .|.|.|.|+|| |..+....+.. . .       ...|.|.++  +|+|.|+|.|.|..|..
T Consensus        13 ~~v~~G~~v~L~c~v~g~~P~p~v~W~Kd-g~~i~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Ytc~A~N~~G~~   91 (101)
T cd04975          13 IFVNLGENLNLVVEVEAYPPPPHINWTYD-NRTLTNKLTEIVTSENESEYRYVSELKLVRLKESEAGTYTFLASNSDASK   91 (101)
T ss_pred             EEEECCCCEEEEEEEEecCCCCccEEEeC-CeeCCCCcceeEEEeccCcceEEEEEEEeecCHhhCeeEEEEEECCCccE
Confidence            89999999999999999 99999999999 77776543322 1 2       367999999  69999999999999999


Q ss_pred             EEEEEEEEE
Q psy8771         183 ETSTIVKVQ  191 (904)
Q Consensus       183 ~~~~~l~v~  191 (904)
                      +..+.|.|.
T Consensus        92 ~~t~~L~V~  100 (101)
T cd04975          92 SLTFELYVN  100 (101)
T ss_pred             EEEEEEEEE
Confidence            999888876

Ig4_SCFR_like; fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR). In addition to SCFR this group also includes the fourth Ig domain of platelet-derived growth factor receptors (PDGFR), alpha and beta, the fourth Ig domain of macrophage colony stimulating factor (M-CSF), and the Ig domain of the receptor tyrosine kinase KIT. SCFR and the PDGFR alpha and beta have similar organization: an extracellular component having five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. SCFR and its ligand SCF are critical for normal hematopoiesis, mast cell development, melanocytes and gametogenesis. SCF binds to the second and third Ig-like domains of SCFR, this fourth Ig-like domain participates in SCFR dimerization, which follows ligand binding. Deletion of this fourth SCFR_Ig-like domain abolishes

>cd05865 Ig1_NCAM-1 First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1

Probab=99.30  E-value=2.7e-11  Score=99.75  Aligned_cols=81  Identities=22%  Similarity=0.408  Sum_probs=64.2

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCCC-CeEEEeeCCccccCC-CCceee--c---ceEEEEeee--cCCeEEEEEEEecC
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSPM-PFVKWRKGQNIELTP-DDKLPV--G---RNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~k~~~~~~~~-~~~~~~--~---~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      ..|.+ ..+..|+.++|.|.+.|.|. |.|+|+++++..+.. +.|+.+  +   .+.|.|.++  +|+|.|+|.|.|..
T Consensus         5 ~~p~~-~~v~~G~~v~l~C~v~G~P~~p~i~W~~~~g~~l~~~~~r~~v~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~   83 (96)
T cd05865           5 IVPSQ-GEISVGESKFFLCQVAGEAKDKDISWFSPNGEKLTPNQQRISVVRNDDYSSTLTIYNANIDDAGIYKCVVSNED   83 (96)
T ss_pred             EeCCc-cEECCCCeEEEEEEEeCCCCCCEEEEECCCCcCccccCCeEEEEeCCCCceEEEEeccChhhCEEEEEEEEcCC
Confidence            34555 78899999999999999995 799999832655544 445443  2   258999999  69999999999997


Q ss_pred             -cceEEEEEEEE
Q psy8771         180 -GVIETSTIVKV  190 (904)
Q Consensus       180 -g~~~~~~~l~v  190 (904)
                       |..++++.|.|
T Consensus        84 ~g~~~~s~~l~v   95 (96)
T cd05865          84 EGESEATVNVKI   95 (96)
T ss_pred             CCcEEEEEEEEE
Confidence             88888888876

Ig1_NCAM-1: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1. NCAM-1 plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-nonNCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves the Ig1, Ig2, and Ig3 domains. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (trans

>PHA02785 IL-beta-binding protein; Provisional

Probab=99.29  E-value=5.8e-10  Score=115.80  Aligned_cols=219  Identities=12%  Similarity=0.141  Sum_probs=128.7

Q ss_pred             cCCceEEEEeCCCCC--------CCc-eecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceE
Q psy8771          46 SSSTMVIQWDEPETP--------NGQ-ITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLE  116 (904)
Q Consensus        46 ~~~s~~v~W~~~~~~--------~g~-i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~  116 (904)
                      +.+.++|.|.+...+        +|. +........|.+...|...+........+.+.|..   ..+|.|...+.. ..
T Consensus        57 g~p~~~i~W~K~g~~~~~~~~~~~g~~l~i~~~~~~DsG~Y~C~a~N~~g~~~~s~~L~V~~---~~~~~~~~~~~~-~~  132 (326)
T PHA02785         57 GYNILDILWEKRGADNDRIIPIDNGSNMLILNPTQSDSGIYICITKNETYCDMMSLNLTIVS---VSESNIDLISYP-QI  132 (326)
T ss_pred             CCCCceEEEEECCCccceEEEccCCceEEEcccCcccCeEEEEEEECCCcceEEEEEEEEEe---cCCCccceeecc-ce
Confidence            556788999886432        343 44333444566666677766554444455555542   222333323334 56


Q ss_pred             EecCCCeEEEEE-----EccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceEEE---
Q psy8771         117 VMLDSPLNLSCV-----AVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIETS---  185 (904)
Q Consensus       117 ~~~g~~~~l~C~-----~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~---  185 (904)
                      +.+|..+.|.|.     ..+.|.+.|+|+|+ .. + .+.|+.. .++.|.|.++  +|+|.|+|.|.|..|.....   
T Consensus       133 ~~~g~~~~i~C~~~~~~~~~~~~~~i~W~k~-~~-~-~~~r~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~t~  209 (326)
T PHA02785        133 VNERSTGEMVCPNINAFIASNVNADIIWSGH-RR-L-RNKRLKQRTPGIITIEDVRKNDAGYYTCVLKYIYGDKTYNVTR  209 (326)
T ss_pred             ecccCcEEEECCChhhcccCCCCceEEEccC-Cc-c-CCcceEecCCCeEEEeecChhhCeEEEEEEEeccCCEEEeEEE
Confidence            779999999997     34789999999987 42 2 3345443 4678999999  69999999999998875433   


Q ss_pred             -EEEEEEeecCCCCCCC--CCCcceEEEeecCCeEEEEEeCCCccce-EEEEEEEeCCCC---------CCeEEeec---
Q psy8771         186 -TIVKVQCKYAPLLTLP--VAPLDVKISEVTATSVRLDWTYPSETLL-YYVIQYKPKAAN---------TPYSEISG---  249 (904)
Q Consensus       186 -~~l~v~~~~~~~~~~P--~~p~~l~~~~~~~~sv~l~W~~~~~~~~-~y~v~~~~~~~~---------~~~~~~~~---  249 (904)
                       +.|.|....    .+|  ..|..+.+.  ....++|.+...+.+.. .-.+.|..++..         ..+.....   
T Consensus       210 ~v~l~V~~~~----~pp~~~~p~~~~~~--~G~~v~L~C~a~g~P~~~~~~v~W~kng~~i~~~~~~~~~~~~~~~~~~~  283 (326)
T PHA02785        210 IVKLEVRDRI----IPPTMQLPEGVVTS--IGSNLTIACRVSLRPPTTDADVFWISNGMYYEEDDEDGDGRISVANKIYT  283 (326)
T ss_pred             EEEEEEeccC----CCceecCCCcEEec--CCCcEEEEEEEECCCCCCCceEEEEECCEECCCcCCCCceeEEEecCccc
Confidence             344444111    111  123333332  23446666665422211 013444433210         01111000   


Q ss_pred             -----ceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         250 -----IITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       250 -----~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                           .....|+|.+++..+.+.|+|.|.|..|
T Consensus       284 ~~~~~~~~~~L~I~~V~~~D~G~Y~C~A~n~~~  316 (326)
T PHA02785        284 TDKRRVITSRLNINPVKEEDATTFTCMAFTIPS  316 (326)
T ss_pred             cccceeeeEEEEECCcchhcCeeeEEEEEeccC
Confidence                 1135799999999999999999999874

>cd05848 Ig1_Contactin-5 First Ig domain of contactin-5

Probab=99.28  E-value=2.6e-11  Score=100.08  Aligned_cols=78  Identities=24%  Similarity=0.485  Sum_probs=63.6

Q ss_pred             CeEEcCCCCceEEe---cCCCeEEEEEEccCCCCeEEEeeCCccccCC--CCceeecceEEEEeee---cCCeEEEEEEE
Q psy8771         105 PQFSIPPPALLEVM---LDSPLNLSCVAVGSPMPFVKWRKGQNIELTP--DDKLPVGRNVLTLDRV---TESENYTCIAA  176 (904)
Q Consensus       105 P~~~~~~~~~~~~~---~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~--~~~~~~~~~~l~i~~l---~d~g~Y~c~a~  176 (904)
                      |.|+..|.+ +.+.   +|++++|.|.+.|.|.|.|+|+|+ +..+..  ..++...+++|.|.++   +|+|.|+|.|.
T Consensus         2 P~f~~~p~~-~~~~~~~~g~~v~l~C~~~G~P~P~i~W~k~-g~~l~~~~~~~~~~~~g~L~i~~~~~~~D~G~Y~C~A~   79 (94)
T cd05848           2 PVFVQEPDD-AIFPTDSDEKKVILNCEARGNPVPTYRWLRN-GTEIDTESDYRYSLIDGNLIISNPSEVKDSGRYQCLAT   79 (94)
T ss_pred             CeeEECCCc-EEccCCCCCCEEEEEEEeeecCCCEEEEEEC-CeECccCCCceEEeeCCeEEEccCCccCcCEEEEEEEE
Confidence            677888887 6554   478999999999999999999999 666643  2355567789999886   59999999999


Q ss_pred             ecCcceEE
Q psy8771         177 SVLGVIET  184 (904)
Q Consensus       177 n~~g~~~~  184 (904)
                      |..|...+
T Consensus        80 N~~G~~~S   87 (94)
T cd05848          80 NSIGSILS   87 (94)
T ss_pred             cCCCeEEe
Confidence            99998644

Ig1_Contactin-5: First Ig domain of the neural cell adhesion molecule contactin-5. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains, anchored to the membrane by glycosylphosphatidylinositol. The different contactins show different expression patterns in the central nervous system. In rats, a lack of contactin-5 (NB-2) results in an impairment of the neuronal activity in the auditory system. Contactin-5 is expressed specifically in the postnatal nervous system, peaking at about 3 weeks postnatal. Contactin-5 is highly expressed in the adult human brain in the occipital lobe and in the amygdala; lower levels of expression have been detected in the corpus callosum, caudate nucleus, and spinal cord.

>cd05876 Ig3_L1-CAM Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=99.28  E-value=1.8e-11  Score=95.22  Aligned_cols=67  Identities=33%  Similarity=0.555  Sum_probs=55.5

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCC-CceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      +.|+|.+.|.|.|.|.|+|+ +..+... .+.....+.|.|.++  +|.|.|+|.|.|..|..+..+.|.|
T Consensus         1 ~~L~C~~~G~P~P~v~W~k~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V   70 (71)
T cd05876           1 LVLECIAEGLPTPEVHWDRI-DGPLSPNRTKKLNNNKTLQLDNVLESDDGEYVCTAENSEGSARHHYTVTV   70 (71)
T ss_pred             CEEEEEeeEecCCeEEEEEC-CcCCCCCceeEEcCCCEEEEcccCHHhCEEEEEEEEcCCCeEEEEEEEEE
Confidence            47999999999999999999 4444433 233346789999999  6999999999999999988888876

Ig3_L1-CAM: third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains, five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM.

>cd05850 Ig1_Contactin-2 First Ig domain of contactin-2

Probab=99.27  E-value=3.9e-11  Score=99.13  Aligned_cols=82  Identities=21%  Similarity=0.459  Sum_probs=65.4

Q ss_pred             CeEEcCCCCceEEecC---CCeEEEEEEccCCCCeEEEeeCCccccC--CCCceeecceEEEEeee---cCCeEEEEEEE
Q psy8771         105 PQFSIPPPALLEVMLD---SPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPVGRNVLTLDRV---TESENYTCIAA  176 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g---~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~~~~~l~i~~l---~d~g~Y~c~a~  176 (904)
                      |.|...|.+ +.+.+|   +.++|.|.+.|.|.|.|+|+++ +..+.  ...++.+.++.|.|.++   +|+|.|+|.|.
T Consensus         2 P~f~~~P~~-~~~~~~~~g~~v~l~C~a~g~P~p~i~W~~~-g~~l~~~~~~~~~~~~g~L~I~~~~~~~D~G~Y~C~A~   79 (94)
T cd05850           2 PVFEEQPSS-LLFPEGSPEEKVTLGCRARASPPATYRWKMN-GTEIKFAPESRYTLVAGNLVINNPQKARDAGSYQCLAI   79 (94)
T ss_pred             CeeEECCCC-EEecCCCCCCeEEEEeEceeCCCCEEEEEEC-CEECccCCCceEEEECCeEEEccCCccCcCEEEEEEEE
Confidence            667788887 766565   5799999999999999999999 66664  23466667789999875   59999999999


Q ss_pred             ecCcceEE-EEEE
Q psy8771         177 SVLGVIET-STIV  188 (904)
Q Consensus       177 n~~g~~~~-~~~l  188 (904)
                      |..|...+ .+.|
T Consensus        80 N~~G~~~s~~a~l   92 (94)
T cd05850          80 NRCGTVVSREANL   92 (94)
T ss_pred             cCcCcEEEEEEEE
Confidence            99998654 4443

Ig1_Contactin-2: First Ig domain of the neural cell adhesion molecule contactin-2-like. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. It may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module by contacts between IG domains 1 and 4, and domains 2 and 3. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-2 is also expressed in retinal amacrine cells in the developing c

>cd04969 Ig5_Contactin_like Fifth Ig domain of contactin

Probab=99.27  E-value=2.2e-11  Score=95.54  Aligned_cols=70  Identities=23%  Similarity=0.498  Sum_probs=61.1

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      |+.+.|.|.+.|.|.|.++|+|+ +..+....++.. .+++|.|.++  +|+|.|+|.|.|..|..+.++.|.|
T Consensus         1 G~~v~L~C~~~g~P~p~v~W~k~-~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V   73 (73)
T cd04969           1 GGDVIIECKPKAAPKPTISWSKG-TELLTNSSRICIWPDGSLEILNVTKSDEGKYTCFAENFFGKANSTGSLSV   73 (73)
T ss_pred             CCeEEEEEeeeEcCCCEEEEEEC-CEEcccCCCEEECCCCeEEEccCChhHCEEEEEEEECCCCceEEEEEEEC
Confidence            68899999999999999999999 666666666664 5678999999  6999999999999999999888765

Ig5_Contactin_like: Fifth Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd05773 Ig8_hNephrin_like Eighth immunoglobulin-like domain of nephrin

Probab=99.27  E-value=3.9e-11  Score=102.06  Aligned_cols=89  Identities=24%  Similarity=0.329  Sum_probs=69.8

Q ss_pred             CCCCeEEcCCCCceEEe---cCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceee--------cceEEEEeee---c
Q psy8771         102 RVPPQFSIPPPALLEVM---LDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV--------GRNVLTLDRV---T  166 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~---~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~--------~~~~l~i~~l---~  166 (904)
                      ..+|.|..+|.-...+.   .|..++|.|.+.|.|.|.++|+|+ +..+.. +.++..        ..+.|.|.++   +
T Consensus         2 ~~~P~~~~~~~~~~~~~~~~~g~~v~L~C~a~G~P~p~i~W~k~-g~~l~~~~~r~~~~~~~~~~~~~s~L~I~~v~~~~   80 (109)
T cd05773           2 RFAPDLQKGPQLRKVASRGDGSSDANLVCQAQGVPRVQFRWAKN-GVPLDLGNPRYEETTEHTGTVHTSILTIINVSAAL   80 (109)
T ss_pred             ccccccccCCceEEEEEecCCCCEEEEEEECcccCCCEEEEEEC-CEECCCCCCeEEEEeeccCccceeEEEECcCCccC
Confidence            45788877777323333   558999999999999999999999 666643 334431        1357999887   5


Q ss_pred             CCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         167 ESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       167 d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|.|+|.|.|..|.....+.|.+.
T Consensus        81 D~G~Y~C~A~N~~G~~~~~i~L~~~  105 (109)
T cd05773          81 DYALFTCTAHNSLGEDSLDIQLVST  105 (109)
T ss_pred             CCEEEEEEEEeCCccCcEEEEEEec
Confidence            9999999999999999999999988

Ig8_hNephrin_like: domain similar to the eighth immunoglobulin-like domain in human nephrin. Nephrin is an integral component of the slit diaphragm, and is a central component of the glomerular ultrafilter. Nephrin plays a structural role, and has a role in signaling. Nephrin is a transmembrane protein having a short intracellular portion, and an extracellular portion comprised of eight Ig-like domains, and one fibronectin type III-like domain. The extracellular portions of nephrin, from neighboring foot processes of separate podocyte cells, may interact with each other, and in association with other components of the slit diaphragm, form a porous molecular sieve within the slit pore. The intracellular portion of nephrin is associated with linker proteins, which connect nephrin to the actin cytoskeleton. The intracellular portion is tyrosine phosphorylated, and mediates signaling from the slit diaphragm into the p

>cd05866 Ig1_NCAM-2 First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2

Probab=99.26  E-value=4e-11  Score=97.59  Aligned_cols=80  Identities=20%  Similarity=0.441  Sum_probs=63.8

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cce---EEEEeee--cCCeEEEEEEEecCcce
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRN---VLTLDRV--TESENYTCIAASVLGVI  182 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~---~l~i~~l--~d~g~Y~c~a~n~~g~~  182 (904)
                      ..|.+ +.+.+|+.+.|.|.+.|.|. .++|+++++..+..+.|+.+ .++   .|.|.++  +|+|.|+|.|.|..|..
T Consensus         5 ~~~~~-~~v~~G~~v~l~C~~~G~P~-~v~W~k~~g~~~~~~~r~~~~~~g~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~   82 (92)
T cd05866           5 ISLSK-VELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIVSSQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQT   82 (92)
T ss_pred             EEecc-eEEcCCCeEEEEEEEEEeCC-eEEEEeCCCeEecCCCCEEEEeCCCeeEEEEecCChHHCEEEEEEEEcCCCcE
Confidence            34556 88999999999999999998 89999864666666666664 233   8999999  69999999999999985


Q ss_pred             -EEEEEEEE
Q psy8771         183 -ETSTIVKV  190 (904)
Q Consensus       183 -~~~~~l~v  190 (904)
                       +++..|.+
T Consensus        83 ~~~~i~l~~   91 (92)
T cd05866          83 QEATVVLEI   91 (92)
T ss_pred             EEEEEEEEE
Confidence             45555543

Ig1_NCAM-2: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2 (OCAM/mamFas II, RNCAM). NCAM-2 is organized similarly to NCAM , including five N-terminal Ig-like domains and two fibronectin type III domains. NCAM-2 is differentially expressed in the developing and mature olfactory epithelium (OE), and may function like NCAM, as an adhesion molecule.

>cd05863 Ig2_VEGFR-3 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 3 (VEGFR-3)

Probab=99.25  E-value=3.1e-11  Score=91.08  Aligned_cols=64  Identities=16%  Similarity=0.267  Sum_probs=54.2

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      ++|.|.+.|.|.|.++|+|+ |..+...    ...+.|.|.++  +|+|.|+|.|.|..|..+.+..+.+.
T Consensus         1 ~~l~c~v~g~P~P~v~W~kd-g~~l~~~----~~~~~L~i~~v~~~D~G~YtC~a~N~~g~~~~~~~~~l~   66 (67)
T cd05863           1 VKLPVKVAAYPPPEFQWYKD-GKLISGK----HSQHSLQIKDVTEASAGTYTLVLWNSAAGLEKRISLELI   66 (67)
T ss_pred             CEEEEEEEEeCCCEEEEEEC-CEECccc----CCcCEEEECCCCHHHCEEEEEEEEECCccEEEEEEEEEE
Confidence            47999999999999999999 7766432    24569999999  69999999999999988887777654

Ig2_VEGFR-3: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 3 (VEGFR-3). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-3 (Flt-4) binds two members of the VEGF family (VEGF-C and -D) and is involved in tumor angiogenesis and growth.

>cd07693 Ig1_Robo First immunoglobulin (Ig)-like domain in Robo (roundabout) receptors and similar proteins

Probab=99.25  E-value=4.9e-11  Score=101.29  Aligned_cols=85  Identities=27%  Similarity=0.528  Sum_probs=65.5

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-----C-CceeecceEEEEee-------ecCCeE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-----D-DKLPVGRNVLTLDR-------VTESEN  170 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-----~-~~~~~~~~~l~i~~-------l~d~g~  170 (904)
                      ||.|...|.+ +.+.+|+++.|.|.+.|.|.|.|.|+|+ +..+..     . .+....++.+.+..       .+|+|.
T Consensus         1 ~P~i~~~p~~-~~v~~G~~~~l~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~D~G~   78 (100)
T cd07693           1 PPRIVEHPSD-LIVSKGDPATLNCKAEGRPTPTIQWLKN-GQPLETDKDDPRSHRIVLPSGSLFFLRVVHGRKGRSDEGV   78 (100)
T ss_pred             CCeEEecCce-eEEcCCCeEEEEeeCCcCCCCEEEEEEC-CEECccccCCCCcceEEecCCcEEEEEeeccCCCcCcCEE
Confidence            6889999988 9999999999999999999999999999 665543     1 12223344332222       269999


Q ss_pred             EEEEEEecCcc-eEEEEEEEE
Q psy8771         171 YTCIAASVLGV-IETSTIVKV  190 (904)
Q Consensus       171 Y~c~a~n~~g~-~~~~~~l~v  190 (904)
                      |+|.|.|..|. .+..+.|.|
T Consensus        79 Y~C~a~N~~G~~~s~~~~l~v   99 (100)
T cd07693          79 YVCVAHNSLGEAVSRNASLEV   99 (100)
T ss_pred             EEEEEEccccceecceEEEEe
Confidence            99999999999 666776665

Ig1_Robo: domain similar to the first immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit res

>cd04976 Ig2_VEGFR Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor (VEGFR)

Probab=99.25  E-value=3.5e-11  Score=93.35  Aligned_cols=68  Identities=18%  Similarity=0.323  Sum_probs=59.4

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +.|.|.+.|.|.|.+.|+|+ +..+....++....+.|.|.++  +|+|.|+|.|.|..|..+.+..+.+.
T Consensus         1 ~~l~c~v~g~P~p~v~W~k~-g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~a~N~~g~~~~~~~~~~~   70 (71)
T cd04976           1 VRLPVKVKAYPPPEIQWYKN-GKLISEKNRTKKSGHSLTIKDVTEEDAGNYTVVLTNKQAKLEKRLTFTLV   70 (71)
T ss_pred             CEEEeEEEEeCCCEEEEEEC-CEECCCCCEEEcCCCEEEECcCCHHHCEEEEEEEEcCCccEEEEEEEEEE
Confidence            47999999999999999999 7777777777778889999999  69999999999999988777776653

Ig2_VEGFR: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor (VEGFR). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-2 is a major mediator of the mitogenic, angiogenic and microvascular permeability-enhancing effects of VEGF-A. VEGFR-1 may play an inhibitory part in these processes by binding VEGF and interfering with its interaction with VEGFR-2. VEGFR-1 has a signa

>cd05859 Ig4_PDGFR-alpha Fourth immunoglobulin (Ig)-like domain of platelet-derived growth factor receptor (PDGFR) alpha

Probab=99.25  E-value=7.5e-11  Score=98.21  Aligned_cols=76  Identities=21%  Similarity=0.173  Sum_probs=65.1

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----------cceEEEEeee--cCCeEEEEEEEecCcce
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----------GRNVLTLDRV--TESENYTCIAASVLGVI  182 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----------~~~~l~i~~l--~d~g~Y~c~a~n~~g~~  182 (904)
                      ..+..|+.+.|.|.+.|.|.|.|.|+|+ +.++..+.+...          ....|.|.++  +|+|.|+|.|.|..|..
T Consensus        13 ~~~~~~~~~~l~~~v~g~P~P~v~W~kd-g~~l~~~~~~~~~~~~~~~~~~~~s~L~I~~v~~~D~G~Ytc~A~N~~g~~   91 (101)
T cd05859          13 EFANLHEVKEFVVEVEAYPPPQIRWLKD-NRTLIENLTEITTSEHNVQETRYVSKLKLIRAKEEDSGLYTALAQNEDAVK   91 (101)
T ss_pred             EEEecCCcEEEEEEEEEeCCCceEEEEC-CEECcCCcceEEeccccccceeeccEEEEeeCCHHHCEEEEEEEEcCCceE
Confidence            8888999999999999999999999999 777765543321          1357999999  69999999999999999


Q ss_pred             EEEEEEEEE
Q psy8771         183 ETSTIVKVQ  191 (904)
Q Consensus       183 ~~~~~l~v~  191 (904)
                      +.++.|.|.
T Consensus        92 ~~t~~l~V~  100 (101)
T cd05859          92 SYTFALQIQ  100 (101)
T ss_pred             EEEEEEEEE
Confidence            999888875

IG4_PDGFR-alpha: The fourth immunoglobulin (Ig)-like domain of platelet-derived growth factor receptor (PDGFR) alpha. PDGF is a potent mitogen for connective tissue cells. PDGF-stimulated processes are mediated by three different PDGFs (PDGF-A,-B, and C). PDGFR alpha binds to all three PDGFs, whereas the PDGFR beta (not included in this group) binds only to PDGF-B. PDGF alpha is organized as an extracellular component having five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. In mice, PDGFR alpha and PDGFR beta are essential for normal development.

>cd05744 Ig_Myotilin_C_like Immunoglobulin (Ig)-like domain of myotilin, palladin, and myopalladin

Probab=99.25  E-value=3.2e-11  Score=94.71  Aligned_cols=67  Identities=27%  Similarity=0.466  Sum_probs=55.5

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCC-CCceee--c---ceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV--G---RNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~--~---~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      ++|+|.+.|.|.|.|.|+|+ +..+.. ..|+.+  .   ..+|.|.++  +|+|.|+|.|.|..|+..+.+.|.|
T Consensus         1 v~L~C~v~G~P~P~v~W~k~-~~~i~~~~~r~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~v   75 (75)
T cd05744           1 VRLECRVSAIPPPQIFWKKN-NEMLTYNTDRISLYQDNCGRICLLIQNANKEDAGWYTVSAVNEAGVVSCNARLDV   75 (75)
T ss_pred             CEEEEEEeecCCCeEEEEEC-CEECCCCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCcEEEEEEEeC
Confidence            57999999999999999999 666653 355543  1   126999999  6999999999999999999988865

Ig_Myotilin_like_C: immunoglobulin (Ig)-like domain in myotilin, palladin, and myopalladin. Myotilin, palladin, and myopalladin function as scaffolds that regulate actin organization. Myotilin and myopalladin are most abundant in skeletal and cardiac muscle; palladin is ubiquitously expressed in the organs of developing vertebrates and plays a key role in cellular morphogenesis. The three family members each interact with specific molecular partners: all three bind to alpha-actinin; in addition, palladin also binds to vasodilator-stimulated phosphoprotein (VASP) and ezrin, myotilin binds to filamin and actin, and myopalladin also binds to nebulin and cardiac ankyrin repeat protein (CARP).

>cd04973 Ig1_FGFR First immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR)

Probab=99.25  E-value=4.8e-11  Score=95.05  Aligned_cols=74  Identities=19%  Similarity=0.350  Sum_probs=63.9

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      +.+.+|+.+.|.|.+.|. .+.|.|+|+ |..+....++.+..+.|.|.++  +|+|.|+|.|.|..|.....+.|.|
T Consensus         4 ~~~~~G~~v~l~C~~~~~-~~~v~W~k~-g~~l~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g~~~~~~~v~V   79 (79)
T cd04973           4 YSAHPGDLLQLRCRLRDD-VQSINWTKD-GVQLGENNRTRITGEEVQIKDAVPRDSGLYACVTSSPSGSDTTYFSVNV   79 (79)
T ss_pred             EEecCCCCEEEEEEecCC-CceEEEeeC-CcCCCCCceEEEeCCEEEECCCChhhCEEEEEEEeCCCCcccEEEEEeC
Confidence            788999999999999997 568999999 8888777778777789999998  7999999999999998776665543

Ig1_FGFR: The first immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for all FGFs.

>cd04978 Ig4_L1-NrCAM_like Fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related)

Probab=99.25  E-value=3.4e-11  Score=95.78  Aligned_cols=70  Identities=27%  Similarity=0.494  Sum_probs=60.0

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccCCCC---ceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD---KLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~---~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      |+.+.|.|.+.|.|.|.|.|+++ +..+....   +....++.|.|.++  +|+|.|+|.|.|..|...+.+.|.|
T Consensus         1 G~~~~l~C~~~g~P~p~i~W~~~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~V   75 (76)
T cd04978           1 GETGRLDCEAEGIPQPTITWRLN-GVPIEELPPDPRRRVDGGTLILSNVQPNDTAVYQCNASNVHGYLLANAFVHV   75 (76)
T ss_pred             CCeEEEEEEceeeCCCEEEEEEC-CEECCCCCCcceEEccCCEEEECCCChhhCEEEEEEEEccCCeEEEeEEEEE
Confidence            68899999999999999999999 66554432   34456789999999  6999999999999999999988876

Ig4_L1-NrCAM_like: fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related). These proteins belong to the L1 subfamily of cell adhesion molecules (CAMs) and are comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. These molecules are primarily expressed in the nervous system. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth.

>cd05746 Ig4_Peroxidasin Fourth immunoglobulin (Ig)-like domain of peroxidasin

Probab=99.23  E-value=2.7e-11  Score=93.65  Aligned_cols=65  Identities=25%  Similarity=0.634  Sum_probs=56.6

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      +.|.|.+.|.|.|.|+|+|+ +..+....++.+ .++.|.|.++  +|+|.|+|.|.|..|..+.++.|
T Consensus         1 v~L~C~~~g~P~p~i~W~k~-g~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~L   68 (69)
T cd05746           1 VQIPCSAQGDPEPTITWNKD-GVQVTESGKFHISPEGYLAIRDVGVADQGRYECVARNTIGYASVSMVL   68 (69)
T ss_pred             CEeEecceEeCCCEEEEEEC-CEECCCCCCEEECCCCEEEECcCChhhCEEEEEEEECCCCcEEEEEEe
Confidence            57999999999999999999 777766666665 5779999999  69999999999999998887766

Ig4_Peroxidasin: the fourth immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted, and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells, which have undergone programmed cell death, and protection of the organism against non-self.

>cd05732 Ig5_NCAM-1_like Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM) and similar proteins

Probab=99.23  E-value=6.5e-11  Score=99.18  Aligned_cols=84  Identities=25%  Similarity=0.486  Sum_probs=67.3

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-----Cceee----cceEEEEeee--cCCeEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-----DKLPV----GRNVLTLDRV--TESENYT  172 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-----~~~~~----~~~~l~i~~l--~d~g~Y~  172 (904)
                      +|+|.. +.+ ..+.+|+++.|.|.+.|.|.|.|.|+++ +..+...     .++.+    ....|.|.++  +|+|.|+
T Consensus         2 ~P~i~~-~~~-~~~~~g~~v~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~   78 (96)
T cd05732           2 QPKITY-LEN-QTAVELEQITLTCEAEGDPIPEITWRRA-TRNFSEGDKSLDGRIVVRGHARVSSLTLKDVQLTDAGRYD   78 (96)
T ss_pred             Ccccee-cCc-eeEecCCcEEEEEEEeEcCCCcEEEEEC-CcccCCCCccccceEEEeCCccEEEEEECcCCcCcCEEeE
Confidence            577753 445 8899999999999999999999999998 5444332     23333    2358999999  6999999


Q ss_pred             EEEEecCcceEEEEEEEE
Q psy8771         173 CIAASVLGVIETSTIVKV  190 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v  190 (904)
                      |.|.|..|..+.++.|.|
T Consensus        79 C~a~N~~G~~~~s~~l~v   96 (96)
T cd05732          79 CEASNRIGGDQQSMYLEV   96 (96)
T ss_pred             EEEEeCCCCcEEEEEEeC
Confidence            999999999988888764

Ig5_NCAM-1 like: domain similar to the fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-non-NCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM mole

>KOG4258|consensus

Probab=99.23  E-value=3.9e-10  Score=120.91  Aligned_cols=360  Identities=19%  Similarity=0.271  Sum_probs=192.9

Q ss_pred             ceEEEeecCCeEEEEEeCCC----ccceEEEEEEEeCCC-------------CCCeEEee--c-------ceeceEEEcC
Q psy8771         206 DVKISEVTATSVRLDWTYPS----ETLLYYVIQYKPKAA-------------NTPYSEIS--G-------IITTYYTVRN  259 (904)
Q Consensus       206 ~l~~~~~~~~sv~l~W~~~~----~~~~~y~v~~~~~~~-------------~~~~~~~~--~-------~~~~~~~i~~  259 (904)
                      ++.....+.+++.++|..-.    ....+|.+.|...-.             ...|..+.  .       ....-+.+.+
T Consensus       493 ~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~~~~~l~~  572 (1025)
T KOG4258|consen  493 QFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTHPGFLLDG  572 (1025)
T ss_pred             eeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCccccceecCccccccCcceEEeccCCcCCCccccccceehhc
Confidence            34455567789999998763    337889998875421             12233221  1       1223578899


Q ss_pred             CCCCCeEEEEEEEEcCC--CCC--CCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEeece
Q psy8771         260 LSPYTEYEFYIIAVNNL--GRG--PPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGL  335 (904)
Q Consensus       260 L~p~~~Y~~~v~a~n~~--g~s--~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~~~  335 (904)
                      |+|.|.|-|-|++....  +..  ..|....++|.+..| .+|........+++.+.|+|.+|..+||.+.+|.+.....
T Consensus       573 LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~P-spPl~~ls~snsSsqi~l~W~pP~~pNG~lt~Ylv~wer~  651 (1025)
T KOG4258|consen  573 LKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIP-SPPLDVLSKSNSSSQILLKWKPPSQPNGNLTHYLVVWERQ  651 (1025)
T ss_pred             CCccceeEEEEeeeehhhhccccccccceEEEEecCCCC-CCcchhhhccCcchheeEEecCCCCCCCceeEEEEEEEec
Confidence            99999999999997321  211  346667788887766 7787777777778899999999999999999987655332


Q ss_pred             e-------EEEEEcCCCCCcE-EEEEEEEEc---------CCCCCCCCCCcceeeccCCCCCCCCcccccccccceee--
Q psy8771         336 V-------ETYSLTGLYPNTL-YYIWLAAQS---------PRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLV--  396 (904)
Q Consensus       336 ~-------~~~~~~~L~~~~~-Y~v~v~a~~---------~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~--  396 (904)
                      .       ..|-..+++--.. +.=.+.+.+         ..|....-++.......       ........+...+.  
T Consensus       652 ~~~~yl~~~nYC~~~~k~p~~~~~p~~~~ed~d~~~e~e~~~~~Cc~c~~~~~~~~~-------e~eea~~~~~FEd~L~  724 (1025)
T KOG4258|consen  652 AEDGYLEQRNYCHKGLKLPIRADLPSFDSEDMDPLLEMEGHTGPCCSCPPTESYPQY-------EDEEASEQKTFEDFLH  724 (1025)
T ss_pred             cCCchHHHhccccccccccccccCCCCchhhcchhhhhccCCCCCCCCCcccccCch-------hhHHHHHHHHHhhhcc
Confidence            1       1233332211000 000000000         00000000000000000       00000000000000  


Q ss_pred             --------eEEEEeccccCcEEEEEEeeecCC--CCCCCCCCcceE----eeccCCCCceeeeeccCCeEEEEEEEEeeC
Q psy8771         397 --------ETYSLTGLYPNTLYYIWLAAQSPR--GEGATTPPIPVR----TKQYGKTPGFGEQALYPNTLYYIWLAAQSP  462 (904)
Q Consensus       397 --------~~~~~~~~~~~~~y~~~~~~~~~~--g~~~~~~~~~~~----~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~  462 (904)
                              ....-..+.+...+..-.......  .....+.+.++.    ....+...++.+.+|+..+.|.+.+.|.|.
T Consensus       725 n~i~vpr~~~~krk~l~~~~n~t~~~~~~~~~~p~t~~~t~p~ei~e~~p~~~n~n~~~~vi~~Lrh~tlY~i~l~aCnh  804 (1025)
T KOG4258|consen  725 NAIFVPRRPDRKRKSLDDVENCTRLAPTRKAEEPTTPPTTAPTEIEEPKPRLENGNKESYVISGLRHFTLYRIDLQACNH  804 (1025)
T ss_pred             ceeeecccCcccccccccccceeeccccccccCCCCCCCCCCccccccCcccccccchhhhhhccccchhhhhhHhhhcc
Confidence                    000000011111111111100000  000000111110    111256677899999999999999999998


Q ss_pred             CCC----CCCCCCceeeecCCCC-CCCCCCeEEEec-CCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE-ee
Q psy8771         463 RGE----GATTPPIPVRTKQYEP-GTAPRDVQVRPL-SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ-VV  535 (904)
Q Consensus       463 ~g~----~~~s~~~~~~t~~~~p-~~~p~~l~v~~~-~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~  535 (904)
                      .+.    |..+ .+..+|...+- ...|..+.-... ..+++.|+|.+|.+++|-+..|.|.|+............. ..
T Consensus       805 ~~~~~~cS~a~-~v~~RT~~~~~aD~i~g~v~we~~~~~~~v~l~w~EP~~pNGli~~Y~Vk~r~~~~et~v~cvsR~~~  883 (1025)
T KOG4258|consen  805 ATPKCGCSHAA-FVFARTMPTMGADDIPGPVTWECHIEMNSVILRWLEPKEPNGLILNYEVKYRRNGDETHVECVSRMDY  883 (1025)
T ss_pred             cccccccchhh-hhhhccccccccccCCCceeEecccCcceEEEecCCCCCCCccEEEEEEEEeeccCcchhhhhhhhhh
Confidence            765    2211 12223322211 122322322223 7789999999999999999999999997664322211111 11


Q ss_pred             cCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEec
Q psy8771         536 DNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT  575 (904)
Q Consensus       536 ~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t  575 (904)
                      .......+..|.+| .|.++|+|..-.|.|.|.+...+..
T Consensus       884 ~k~~gv~l~~l~~G-~y~~~vratSlaGng~~t~~~~~~v  922 (1025)
T KOG4258|consen  884 AKAGGVYLKRLNPG-NYSVRVRATSLAGNGSWTESVIFYV  922 (1025)
T ss_pred             hhcCceEEEecCCC-cEEEEEEEEeeccCCCCcCCcceEE
Confidence            33345678889888 8999999999999998877665443

>cd05740 Ig_CEACAM_D4 Fourth immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)

Probab=99.23  E-value=8.4e-11  Score=96.06  Aligned_cols=73  Identities=23%  Similarity=0.503  Sum_probs=59.6

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEEecCcceEE-EEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAASVLGVIET-STIVK  189 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~-~~~l~  189 (904)
                      +.+.+|++++|.|.+.|. .|.|.|+|+ +..+... ++.+  +.+.|.|.++  +|+|.|+|.|.|..|...+ .+.|.
T Consensus        13 ~~v~~g~~v~l~C~a~g~-~p~i~W~kn-g~~l~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~S~~~~L~   89 (91)
T cd05740          13 QPPEDNQPVTLTCEAEGQ-ATYIWWVNN-GSLLVPP-RLQLSNDNRTLTFNNVTRSDTGHYQCEASNEVSNMTSDPYILN   89 (91)
T ss_pred             cccccCCcEEEEEEeCCC-CCEEEEEEC-CEECCCC-CEEEeCCCCEEEECcCChhhCEEEEEEEEcCCCCEEeeeEEEE
Confidence            899999999999999999 999999999 5555433 3433  5568999999  6999999999999998544 55555


Q ss_pred             E
Q psy8771         190 V  190 (904)
Q Consensus       190 v  190 (904)
                      |
T Consensus        90 V   90 (91)
T cd05740          90 V   90 (91)
T ss_pred             e
Confidence            4

Ig_CEACAM_D4: immunoglobulin (Ig)-like domain 4 in carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) protein subfamily. The CEA family is a group of anchored or secreted glycoproteins, expressed by epithelial cells, leukocytes, endothelial cells and placenta. The CEA family is divided into the CEACAM and pregnancy-specific glycoprotein (PSG) subfamilies. This group represents the CEACAM subfamily. CEACAM1 has many important cellular functions, it is a cell adhesion molecule, and a signaling molecule that regulates the growth of tumor cells, it is an angiogenic factor, and is a receptor for bacterial and viral pathogens, including mouse hepatitis virus (MHV). In mice, four isoforms of CEACAM1 generated by alternative splicing have either two [D1, D4] or four [D1-D4] Ig-like domains on the cell surface. This family corresponds to the

>cd05725 Ig3_Robo Third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=99.23  E-value=4.8e-11  Score=92.48  Aligned_cols=67  Identities=31%  Similarity=0.564  Sum_probs=55.4

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      ++|+|.+.|.|.|.+.|+|+ +..+.........++.|.|.++  +|+|.|+|.|.|..|..+..+.|.|
T Consensus         1 v~l~C~~~g~P~p~v~W~k~-~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V   69 (69)
T cd05725           1 VEFQCEVGGDPVPTVLWRKE-DGELPKGRAEILDDKSLKIRNVTAGDEGSYTCEAENMVGKIEASASLTV   69 (69)
T ss_pred             CEEEEECccCCCCEEEEEEC-CccCCCCcEEEeeCCEEEECcCChhHCEEEEEEEEcCCCcEEEEEEEEC
Confidence            57999999999999999999 5555443322336778999999  6999999999999999988888764

Ig3_Robo: domain similar to the third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagoni

>cd05854 Ig6_Contactin-2 Sixth Ig domain of contactin-2

Probab=99.22  E-value=8.7e-11  Score=94.72  Aligned_cols=70  Identities=21%  Similarity=0.376  Sum_probs=57.9

Q ss_pred             CCeEEEEEEccCCCC--eEEEeeCCccccCC---CCcee---e--cceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771         121 SPLNLSCVAVGSPMP--FVKWRKGQNIELTP---DDKLP---V--GRNVLTLDRV--TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       121 ~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~---~~~~~---~--~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      +.++|.|.+.|+|.|  .|+|+|+ +..+..   ..++.   .  ..++|.|.++  +|+|.|+|.|.|..|+.++++.|
T Consensus         1 ~~~~L~C~a~g~P~p~~~v~W~~~-g~~i~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~n~~g~~~~~~~L   79 (85)
T cd05854           1 ENLTLQCHASHDPTMDLTFTWSLD-DFPIDLDKPNGHYRRMEVKETIGDLVIVNAQLSHAGTYTCTAQTVVDSASASATL   79 (85)
T ss_pred             CcEEEEEEEecCCCCCeEEEEEEC-CeEccccCCCCcEEEEEecceEeEEEEccCChhhCeEEEEEEecCCCCEEEEEEE
Confidence            468999999999998  5799999 665543   22332   1  4578999999  69999999999999999999999


Q ss_pred             EEE
Q psy8771         189 KVQ  191 (904)
Q Consensus       189 ~v~  191 (904)
                      .|.
T Consensus        80 ~V~   82 (85)
T cd05854          80 VVR   82 (85)
T ss_pred             EEE
Confidence            998

Ig6_Contactin-2: Sixth Ig domain of the neural cell adhesion molecule contactin-2-like. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. It may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module by contacts between IG domains 1 and 4, and domains 2 and 3. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-2 is also expressed in retinal amacrine cells in the developing c

>cd05864 Ig2_VEGFR-2 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 2 (VEGFR-2)

Probab=99.21  E-value=6.1e-11  Score=90.87  Aligned_cols=67  Identities=21%  Similarity=0.309  Sum_probs=55.4

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +.|.|.+.|.|.|.++|+|+ +..+....++. .+..|.|.++  +|+|.|+|.|.|..|..+....+.+.
T Consensus         1 ~~~~c~v~G~P~P~v~W~k~-g~~l~~~~~~~-~~~~L~I~~v~~~D~G~YtC~a~N~~G~~~~~~t~~l~   69 (70)
T cd05864           1 VKIPVKYYGYPPPEVKWYKN-GQLIVLNHTFK-RGVHLTIYEVTEKDAGNYTVVLTNPITKEEQRHTFQLV   69 (70)
T ss_pred             CEEEeEEEEeCCCEEEEEEC-CEECCCCCEEc-cCCEEEECcCCHHHCEEEEEEEEECCCceeeEEEEEEE
Confidence            47999999999999999999 77776554443 4558999999  69999999999999987777666653

Ig2_VEGF-2: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 2 (VEGFR-2). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-2 (KDR/Flk-1) is a major mediator of the mitogenic, angiogenic and microvascular permeability-enhancing effects of VEGF-A; VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGF-A also interacts with VEGFR-1, which it binds more strongly than VEGFR-2. VEGFR-2 and -1 may mediate a chemotactic and a survival signal in hematopoietic stem cells or leukemia cells.

>cd05748 Ig_Titin_like Immunoglobulin (Ig)-like domain of titin and similar proteins

Probab=99.21  E-value=7.9e-11  Score=92.86  Aligned_cols=68  Identities=24%  Similarity=0.394  Sum_probs=57.5

Q ss_pred             CeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         122 PLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       122 ~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      .+.|.|.+.|.|.|.+.|+|+ +..+....++.+    ....|.|.++  +|+|.|+|.|.|..|..+.++.|.|
T Consensus         1 ~~~l~c~~~G~P~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V   74 (74)
T cd05748           1 SVRLEVPISGRPTPTVTWSKD-GKPLKLSGRVQIETTASSTSLVIKNAERSDSGKYTLTLKNPAGEKSATINVKV   74 (74)
T ss_pred             CEEEEeeEeeeCCCeEEEEEC-CEEcCCCCeEEEEECCCeEEEEECCCCcCcCEEEEEEEECCCccEEEEEEEEC
Confidence            478999999999999999999 667765566554    3568999999  6999999999999999888887764

Ig_Titin_like: immunoglobulin (Ig)-like domain found in titin-like proteins. Titin (also called connectin) is a fibrous sarcomeric protein specifically found in vertebrate striated muscle. Titin is gigantic, depending on isoform composition it ranges from 2970 to 3700 kDa, and is of a length that spans half a sarcomere. Titin largely consists of multiple repeats of Ig-like and fibronectin type 3 (FN-III)-like domains. Titin connects the ends of myosin thick filaments to Z disks and extends along the thick filament to the H zone. It appears to function similarly to an elastic band, keeping the myosin filaments centered in the sarcomere during muscle contraction or stretching. Within the sarcomere, titin is also attached to or is associated with myosin binding protein C (MyBP-C). MyBP-C appears to contribute to the generation of passive tension by titin, and similar to titin has repeated Ig-like and FN-

>cd05857 Ig2_FGFR Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor

Probab=99.20  E-value=8.8e-11  Score=95.76  Aligned_cols=75  Identities=24%  Similarity=0.516  Sum_probs=62.6

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCce-----eecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKL-----PVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~-----~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      ..+.+|+.+.|.|.+.|.|.|.|+|+|+ +..+....+.     ......|.|.++  +|+|.|+|.|.|..|..+..+.
T Consensus         4 ~~v~~G~~~~L~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~~~~~~l~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~   82 (85)
T cd05857           4 HAVPAANTVKFRCPAAGNPTPTMRWLKN-GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYH   82 (85)
T ss_pred             EEcCCCCEEEEEEEcCCCCCCEEEEEEC-CEECCCCCceeeeEEeCCceEEEEccCCcccCEEEEEEEEeCCCEEEEEEE
Confidence            5678999999999999999999999999 6666544332     224567999888  6999999999999999999888


Q ss_pred             EEE
Q psy8771         188 VKV  190 (904)
Q Consensus       188 l~v  190 (904)
                      |.|
T Consensus        83 l~v   85 (85)
T cd05857          83 LDV   85 (85)
T ss_pred             EEC
Confidence            765

Ig2_FGFR: second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor. FGF receptors bind FGF signaling polypeptides. FGFs participate in multiple processes such as morphogenesis, development, and angiogenesis. FGFs bind to four FGF receptor tyrosine kinases (FGFR1, -2, -3, -4). Receptor diversity is controlled by alternative splicing producing splice variants with different ligand binding characteristics and different expression patterns. FGFRs have an extracellular region comprised of three IG-like domains, a single transmembrane helix, and an intracellular tyrosine kinase domain. Ligand binding and specificity reside in the Ig-like domains 2 and 3, and the linker region that connects these two. FGFR activation and signaling depend on FGF-induced dimerization, a process involving cell surface heparin or heparin sulfate proteoglycans.

>cd05853 Ig6_Contactin-4 Sixth Ig domain of contactin-4

Probab=99.20  E-value=1.3e-10  Score=92.28  Aligned_cols=70  Identities=11%  Similarity=0.274  Sum_probs=58.7

Q ss_pred             CCeEEEEEEccCC--CCeEEEeeCCccccC---CCCceee-----cceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771         121 SPLNLSCVAVGSP--MPFVKWRKGQNIELT---PDDKLPV-----GRNVLTLDRV--TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       121 ~~~~l~C~~~g~p--~p~i~W~k~~~~~~~---~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      +++.|+|.+.++|  .+.|.|+|| |..+.   ...++..     ..+.|.|.++  +|+|.|+|.|.|..++.++++.|
T Consensus         1 ~~~~l~C~v~~d~~l~~~~~W~~d-g~~i~~~~~~~~~~~~~~~~~~~~L~I~nv~~~dsG~YtC~a~n~~~~~~a~a~L   79 (85)
T cd05853           1 ESIVLPCQVSHDHSLDIVFTWSFN-GHLIDFQKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADL   79 (85)
T ss_pred             CcEEEEEEeccCCCCCcEEEEEEC-CEECcccCCCccEEEeccCCCCCcEEEecCCHHHCEEEEEEEEcccCceEEEEEE
Confidence            4689999999855  678999999 77664   2335544     4568999999  69999999999999999999999


Q ss_pred             EEE
Q psy8771         189 KVQ  191 (904)
Q Consensus       189 ~v~  191 (904)
                      .|+
T Consensus        80 ~V~   82 (85)
T cd05853          80 IVR   82 (85)
T ss_pred             EEe
Confidence            999

Ig6_Contactin-4: sixth Ig domain of the neural cell adhesion molecule contactin-4. Contactins are neural cell adhesion molecules, and are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The different contactins show different expression patterns in the central nervous system. Highest expresson of contactin-4 is in testes, thyroid, small intestine, uterus and brain. Contactin-4 plays a role in the response of neuroblastoma cells to differentiating agents, such as retinoids. The contactin 4 gene is associated with cerebellar degeneration in spinocerebellar ataxia type 16.

>cd05743 Ig_Perlecan_D2_like Immunoglobulin (Ig)-like domain II (D2) of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2

Probab=99.19  E-value=8.9e-11  Score=93.39  Aligned_cols=70  Identities=24%  Similarity=0.501  Sum_probs=58.1

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      |+++.|.|.+.|.|.|.|.|+++ +..+....++.+    +.+.|.|.++  +|+|.|+|.|.|..|...+.+.+.+
T Consensus         1 G~~v~l~C~~~g~P~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~~~~   76 (78)
T cd05743           1 GETVEFTCVATGVPTPIINWRLN-WGHVPDSARVSITSEGGYGTLTIRDVKESDQGAYTCEAINTRGMVFGIPDGIL   76 (78)
T ss_pred             CCEEEEEEEEEEecCCEEEEEEC-CeECCCCCCEEEEECCCEEEEEECCCChHHCEEEEEEEEecCCEEEecccEEE
Confidence            68899999999999999999999 556655555543    3468999999  6999999999999999877766654

Ig_Perlecan_D2_like: the immunoglobulin (Ig)-like domain II (D2) of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2. Perlecan consists of five domains. Domain I has three putative heparan sulfate attachment sites; domain II has four LDL receptor-like repeats, and one Ig-like repeat; domain III resembles the short arm of laminin chains; domain IV has multiple Ig-like repeats (21 repeats in human perlecan); and domain V resembles the globular G domain of the laminin A chain and internal repeats of EGF. Perlecan may participate in a variety of biological functions including cell binding, LDL-metabolism, basement membrane assembly and selective permeability, calcium binding, and growth- and neurite-promoting activities.

>cd05764 Ig_2 Subgroup of the immunoglobulin (Ig) superfamily

Probab=99.19  E-value=1.2e-10  Score=91.84  Aligned_cols=71  Identities=18%  Similarity=0.397  Sum_probs=59.0

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee-ecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP-VGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      |+.+.|.|.+.|.|.|.|.|+++++..+....+.. ..+++|.|.++  +|.|.|+|.|.|..|..++.+.|.|
T Consensus         1 G~~~~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~v   74 (74)
T cd05764           1 GQRATLRCKARGDPEPAIHWISPDGKLISNSSRTLVYDNGTLDILITTVKDTGSFTCIASNAAGEATATVELHI   74 (74)
T ss_pred             CCeEEEEEEccCcCCCEEEEEeCCCEEecCCCeEEEecCCEEEEEECChhhCEEEEEEEECCCCeEEEEEEEEC
Confidence            68899999999999999999985466665555443 36778999988  6999999999999999888877764

Ig_2: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05891 Ig_M-protein_C C-terminal immunoglobulin (Ig)-like domain of M-protein (also known as myomesin-2)

Probab=99.18  E-value=1.6e-10  Score=95.03  Aligned_cols=75  Identities=27%  Similarity=0.441  Sum_probs=62.7

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--c---ceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--G---RNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~---~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      +++.+|+.+.|.|.+.|.|.|.+.|+|+ +..+....++..  .   ..+|.|.++  +|+|.|+|.|.|..|...++..
T Consensus        11 v~v~eG~~v~L~C~v~g~P~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~   89 (92)
T cd05891          11 VTIMEGKTLNLTCTVFGNPDPEVIWFKN-DQDIELSEHYSVKLEQGKYASLTIKGVTSEDSGKYSINVKNKYGGETVDVT   89 (92)
T ss_pred             EEEcCCCEEEEEEEEEEeCCCeEEEEEC-CEECCCCCCEEEEEcCCCEEEEEECCCChhhCEEEEEEEEeCCCceeeEEE
Confidence            8999999999999999999999999999 555655554432  2   247999998  7999999999999999888777


Q ss_pred             EEE
Q psy8771         188 VKV  190 (904)
Q Consensus       188 l~v  190 (904)
                      |.|
T Consensus        90 v~~   92 (92)
T cd05891          90 VSV   92 (92)
T ss_pred             EEC
Confidence            654

Ig_M-protein_C: the C-terminal immunoglobulin (Ig)-like domain of M-protein (also known as myomesin-2). M-protein is a structural protein localized to the M-band, a transverse structure in the center of the sarcomere, and is a candidate for M-band bridges. M-protein is modular consisting mainly of repetitive IG-like and fibronectin type III (FnIII) domains, and has a muscle-type specific expression pattern. M-protein is present in fast fibers.

>cd05722 Ig1_Neogenin First immunoglobulin (Ig)-like domain in neogenin and similar proteins

Probab=99.18  E-value=1.9e-10  Score=95.82  Aligned_cols=81  Identities=25%  Similarity=0.491  Sum_probs=63.3

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc--e-eecceEEEEeee-------cCCeEEEEEEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK--L-PVGRNVLTLDRV-------TESENYTCIAA  176 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~--~-~~~~~~l~i~~l-------~d~g~Y~c~a~  176 (904)
                      |...|.+ ..+.+|+++.|.|.+.|.|.|.|+|+|+ +..+....+  . ...+++|.|.++       +|.|.|+|.|.
T Consensus         2 f~~~P~~-~~~~~g~~v~l~C~v~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~~~~l~i~~v~~~~~~~~D~G~Y~C~a~   79 (95)
T cd05722           2 FLSEPSD-IVAVRGGPVVLNCSAEGEPPPKIEWKKD-GVLLNLVSDERRQQLPNGSLLITSVVHSKHNKPDEGFYQCVAQ   79 (95)
T ss_pred             cEECCCC-eEEcCCCCEEEeeecccCCCCEEEEEEC-CeECccccCcceEEccCCeEEEeeeeccCCCCCcCEEEEEEEE
Confidence            4556777 8888999999999999999999999999 666654322  2 235677888776       48999999999


Q ss_pred             ec-Ccce-EEEEEEE
Q psy8771         177 SV-LGVI-ETSTIVK  189 (904)
Q Consensus       177 n~-~g~~-~~~~~l~  189 (904)
                      |. .|.. +..+.|.
T Consensus        80 N~~~G~~~s~~~~l~   94 (95)
T cd05722          80 NDSLGSIVSRTARLT   94 (95)
T ss_pred             CCccCcEEEeeeEEe
Confidence            99 9986 4455554

Ig1_Neogenin: first immunoglobulin (Ig)-like domain in neogenin and related proteins. Neogenin is a cell surface protein which is expressed in the developing nervous system of vertebrate embryos in the growing nerve cells. It is also expressed in other embryonic tissues, and may play a general role in developmental processes such as cell migration, cell-cell recognition, and tissue growth regulation. Included in this group is the tumor suppressor protein DCC, which is deleted in colorectal carcinoma . DCC and neogenin each have four Ig-like domains followed by six fibronectin type III domains, a transmembrane domain, and an intracellular domain.

>cd05763 Ig_1 Subgroup of the immunoglobulin (Ig) superfamily

Probab=99.17  E-value=1.7e-10  Score=91.23  Aligned_cols=68  Identities=25%  Similarity=0.576  Sum_probs=55.1

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccC--CCCceee--cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPV--GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      ++|.|.+.|.|.|.|+|+|+++..+.  ...++..  .++.|.|.++  +|+|.|+|.|.|..|.....+.|.|
T Consensus         1 a~l~C~~~G~P~P~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~~~~l~V   74 (75)
T cd05763           1 ARLECAATGHPTPQIAWQKDGGTDFPAARERRMHVMPEDDVFFIVDVKIEDTGVYSCTAQNTAGSISANATLTV   74 (75)
T ss_pred             CEeEeecccccCCEEEEEeCCCccCCcccccceEEecCCCEEEEeeCCcccCEEEEEEEEcCCCEEEeeEEEEE
Confidence            47999999999999999998443232  2234433  4568999999  6999999999999999999988877

Ig_1: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05758 Ig5_KIRREL3-like Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2) and similar proteins

Probab=99.16  E-value=2.3e-10  Score=95.81  Aligned_cols=82  Identities=20%  Similarity=0.381  Sum_probs=64.8

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCC--CCceeecc--------eEEEEeeec--C-Ce
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTP--DDKLPVGR--------NVLTLDRVT--E-SE  169 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~--~~~~~~~~--------~~l~i~~l~--d-~g  169 (904)
                      ||.|.. +.. ..+.+|+.+.|.|.+.|.|.| .|.|+++ +..+..  ..|+.+..        ..|.|.+++  | .|
T Consensus         2 pp~i~~-~~~-~~~~~G~~v~L~C~~~g~P~P~~v~W~~~-~~~i~~~~~~r~~i~~~~~~~~~~s~L~I~~v~~~d~~G   78 (98)
T cd05758           2 PPIITS-EAT-QYAILGDKGRVECFIFSTPPPDRIVWTWK-ENELESGSSGRYTVETDPSPGGVLSTLTISNTQESDFQT   78 (98)
T ss_pred             CCeEcC-CCc-EEEeCCCcEEEEEEEcccCCCCEeEEEEC-CEEccCCCCCCEEEEEecCCCceEEEEEECCccccccce
Confidence            677754 445 788999999999999999999 6999999 655543  24555421        379999993  5 79


Q ss_pred             EEEEEEEecCcceEEEEEE
Q psy8771         170 NYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       170 ~Y~c~a~n~~g~~~~~~~l  188 (904)
                      .|+|.|.|..|...+.+.|
T Consensus        79 ~Y~C~A~N~~G~~~~~~~L   97 (98)
T cd05758          79 SYNCTAWNSFGSGTAIISL   97 (98)
T ss_pred             eEEEEEEcCCCcccEEEEe
Confidence            9999999999998887765

Ig5_KIRREL3-like: domain similar to the fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2). This protein has five Ig-like domains, one transmembrane domain, and a cytoplasmic tail. Included in this group is mammalian Kirrel (Neph1), Kirrel2 (Neph3), and Drosophila RST (irregular chiasm C-roughest) protein. These proteins contain multiple Ig domains, have properties of cell adhesion molecules, and are important in organ development.

>cd05726 Ig4_Robo Fhird immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=99.16  E-value=2e-10  Score=94.42  Aligned_cols=72  Identities=26%  Similarity=0.519  Sum_probs=60.7

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCcccc-------CCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIEL-------TPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVK  189 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~-------~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~  189 (904)
                      |+.+.|.|.+.|.|.|.|.|+|+++..+       ....|+.+ .++.|.|.++  +|+|.|+|.|.|..|...+.+.|.
T Consensus         1 G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~r~~v~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~   80 (90)
T cd05726           1 GRTVTFQCEATGNPQPAIFWQKEGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSILTKAYLE   80 (90)
T ss_pred             CCEEEEEEECCccCCCEEEEEeCCCcceeecccCCCCCCeEEECCCCeEEEeeCChhhCEEEEEEEEcCCCceEEEEEEE
Confidence            6889999999999999999999844321       23445654 4678999999  699999999999999999999999


Q ss_pred             EE
Q psy8771         190 VQ  191 (904)
Q Consensus       190 v~  191 (904)
                      |.
T Consensus        81 V~   82 (90)
T cd05726          81 VT   82 (90)
T ss_pred             Ee
Confidence            98

Ig4_Robo: domain similar to the fhird immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagoni

>cd05760 Ig2_PTK7 Second immunoglobulin (Ig)-like domain of protein tyrosine kinase (PTK) 7, also known as CCK4

Probab=99.15  E-value=1.8e-10  Score=91.24  Aligned_cols=68  Identities=25%  Similarity=0.462  Sum_probs=53.7

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCCC-ceee--cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPDD-KLPV--GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~~-~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      ++|.|.+.|.|.|.|+|+|+ |..+.... ++..  .++.|.|.++  +|+|.|+|.|.|..|...+++.+.+.
T Consensus         1 v~L~C~~~g~P~p~v~W~k~-g~~l~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~s~~~~~l~   73 (77)
T cd05760           1 VTLRCHIDGHPRPTYQWFRD-GTPLSDGQGNYSVSSKERTLTLRSAGPDDSGLYYCCAHNAFGSVCSSQNFTLS   73 (77)
T ss_pred             CEEEEEeeecCCCcEEEEEC-CEECCCCCccEEEeCCCCEEEEeeCCcccCEEEEEEEEeCCCeEeeCceEEEE
Confidence            57999999999999999999 66665432 3333  4568999999  69999999999999987655555443

Ig2_PTK7: domain similar to the second immunoglobulin (Ig)-like domain in protein tyrosine kinase (PTK) 7, also known as CCK4. PTK7 is a subfamily of the receptor protein tyrosine kinase family, and is referred to as an RPTK-like molecule. RPTKs transduce extracellular signals across the cell membrane, and play important roles in regulating cell proliferation, migration, and differentiation. PTK7 is organized as an extracellular portion having seven Ig-like domains, a single transmembrane region, and a cytoplasmic tyrosine kinase-like domain. PTK7 is considered a pseudokinase as it has several unusual residues in some of the highly conserved tyrosine kinase (TK) motifs; it is predicted to lack TK activity. PTK7 may function as a cell-adhesion molecule. PTK7 mRNA is expressed at high levels in placenta, melanocytes, liver, lung, pancreas, and kidney. PTK7 is overexpressed in s

>cd05738 Ig2_RPTP_IIa_LAR_like Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

Probab=99.14  E-value=1.6e-10  Score=90.70  Aligned_cols=67  Identities=19%  Similarity=0.488  Sum_probs=55.0

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccC--CCCceee-cceEEEEeee--cCCeEEEEEEEecCcc-eEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGV-IETSTIVKV  190 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~-~~~~~~l~v  190 (904)
                      ++|.|.+.|.|.|.|+|+|+ +..+.  ...++.. .++.|.|.++  +|+|.|+|.|.|..|. .+..+.|.|
T Consensus         1 a~l~C~~~G~P~p~v~W~k~-~~~~~~~~~~~~~~~~~g~L~i~~~~~~D~G~Y~C~a~N~~G~~~s~~a~l~v   73 (74)
T cd05738           1 ATMLCAASGNPDPEITWFKD-FLPVDTTSNGRIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYV   73 (74)
T ss_pred             CEEEEEEeEecCCEEEEEEC-CEECccCCCCCEEEcCCcEEEECCCChhhCEEEEEEEECCCCceEcccEEEEE
Confidence            57999999999999999999 66665  3455554 5678999998  6999999999999998 466777766

Ig2_RPTP_IIa_LAR_like: domain similar to the second immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple Ig-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains.

>cd05855 Ig_TrkB_d5 Fifth domain (immunoglobulin-like) of Trk receptor TrkB

Probab=99.14  E-value=1.7e-10  Score=89.98  Aligned_cols=65  Identities=20%  Similarity=0.290  Sum_probs=52.7

Q ss_pred             EEEEEEccCCCCeEEEeeCCccccCCCCceee---------cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEE
Q psy8771         124 NLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV---------GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVK  189 (904)
Q Consensus       124 ~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~---------~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~  189 (904)
                      -|.|.+.|.|.|+|+|+|+ |..+..+.+...         ..+.|.|.++  +|+|.|+|.|.|..|+.+++..+.
T Consensus         2 ~i~~~v~G~P~Pti~W~kn-g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~~~~~~   77 (79)
T cd05855           2 CIPFTVKGNPKPTLQWFHE-GAILNESEYICTKIHVINNTEYHGCLQLDNPTHLNNGIYTLVAKNEYGEDEKNVSAH   77 (79)
T ss_pred             eEEEEEeEeCCCceEEEEC-CEECCCCcceeeeeEeecccceEEEEEECCCCcccCEEEEEEEEcCCcccceEEEee
Confidence            3789999999999999999 878876654321         2357999998  699999999999999887766543

TrkB_d5: the fifth domain of Trk receptor TrkB, this is an immunoglobulin (Ig)-like domain which binds to neurotrophin. The Trk family of receptors are tyrosine kinase receptors, which mediate the trophic effects of the neurotrophin Nerve growth factor (NGF) family. The Trks are activated by dimerization, leading to autophosphorylation of intracellular tyrosine residues, and triggering the signal transduction pathway. TrkB shares significant sequence homology and domain organization with TrkA, and TrkC. The first three domains are leucine-rich domains. The fourth and fifth domains are Ig-like domains playing a part in ligand binding. TrKB is recognized by brain-derived neurotrophic factor (BDNF) and neurotrophin (NT)-4. In some cell systems NT-3 can activate TrkA and TrkB receptors. TrKB transcripts are found throughout multiple structures of the central and peripheral nervous systems.

>cd05731 Ig3_L1-CAM_like Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=99.14  E-value=1.8e-10  Score=90.27  Aligned_cols=67  Identities=34%  Similarity=0.555  Sum_probs=54.2

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCC-CceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      +.|.|.+.|.|.|.+.|+|+ +..+... .+.....+.|.|.++  +|+|.|+|.|.|..|..+..+.|.|
T Consensus         1 v~l~C~~~g~P~p~v~W~k~-~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V   70 (71)
T cd05731           1 LLLECIAEGLPTPEISWIKI-GGELPADRTKFENFNKTLKIDNVSEEDDGEYRCTASNSLGSARHTISVTV   70 (71)
T ss_pred             CEEEEEeeEecCCeEEEEEC-CeECCCCceeEecCCCEEEECCCCHHHCEEEEEEEEeCCceEEEEEEEEE
Confidence            47999999999999999999 4444332 222334568999999  6999999999999999888888776

Ig3_L1-CAM_like: domain similar to the third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM and human neurofascin.

>cd05724 Ig2_Robo Second immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=99.14  E-value=4.5e-10  Score=91.92  Aligned_cols=77  Identities=23%  Similarity=0.522  Sum_probs=61.6

Q ss_pred             CCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCC-CCceee-cceEEEEeee--cCCeEEEEEEEecCcceE-E
Q psy8771         111 PPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTP-DDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIE-T  184 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~-~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~-~  184 (904)
                      |.+ +.+.+|+++.|.|.+ .|.|.|.|.|+|+ +..+.. ..++.. .++.|.|.++  +|+|.|+|.|.|..|... .
T Consensus         3 p~~-~~~~~G~~v~l~C~~~~g~p~p~i~W~k~-g~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~s~   80 (86)
T cd05724           3 PSD-TQVAVGEMAVLECSPPRGHPEPTVSWRKD-GQPLNLDNERVRIVDDGNLLIAEARKSDEGTYKCVATNMVGERESA   80 (86)
T ss_pred             Ccc-EEEeCCCCEEEEEECCCCCCCCEEEEEEC-CEECCCCCCCEEEccCCEEEEeECCcccCEEEEEEEEeccCceeee
Confidence            445 889999999999998 7999999999999 555544 444443 5679999999  699999999999999854 4


Q ss_pred             EEEEE
Q psy8771         185 STIVK  189 (904)
Q Consensus       185 ~~~l~  189 (904)
                      .+.|.
T Consensus        81 ~~~l~   85 (86)
T cd05724          81 AARLS   85 (86)
T ss_pred             eEEEE
Confidence            44443

Ig2_Robo: domain similar to the second immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antago

>cd04974 Ig3_FGFR Third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR)

Probab=99.13  E-value=1.7e-10  Score=94.58  Aligned_cols=72  Identities=24%  Similarity=0.444  Sum_probs=55.3

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCC---ccccCC-CCc-ee-----------ecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQ---NIELTP-DDK-LP-----------VGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~---~~~~~~-~~~-~~-----------~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      |+.++|+|.+.|.|.|.|+|+|++   +..+.. +.. ..           .....|.|.++  +|+|.|+|.|.|..|.
T Consensus         1 G~~v~l~C~v~g~P~P~i~W~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~   80 (90)
T cd04974           1 GSDVEFHCKVYSDAQPHIQWLKHVEVNGSKYGPDGLPYVTVLKVAGINTTDNESEVLYLRNVSFDDAGEYTCLAGNSIGP   80 (90)
T ss_pred             CCcEEEEEEEeCCCCCeEEEEEecccCCceeCCCCCceEEEEEecCCcccccccceEEEeccccccCcEEEEEeecccCc
Confidence            678999999999999999999962   222211 111 00           12357999988  7999999999999999


Q ss_pred             eEEEEEEEEE
Q psy8771         182 IETSTIVKVQ  191 (904)
Q Consensus       182 ~~~~~~l~v~  191 (904)
                      ..+++.|.|.
T Consensus        81 ~~~sa~L~V~   90 (90)
T cd04974          81 SHHSAWLTVL   90 (90)
T ss_pred             ccCCEEEEeC
Confidence            9999999873

Ig3_FGFR: third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for FGFs.

>cd07702 Ig2_VEGFR-1 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 1 (VEGFR-1)

Probab=99.11  E-value=3.6e-10  Score=86.59  Aligned_cols=62  Identities=18%  Similarity=0.211  Sum_probs=51.1

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCC-CceeecceEEEEeee--cCCeEEEEEEEecCcceEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETS  185 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~  185 (904)
                      +.|.|.+.|.|.|++.|+|+ +..+... .++..++.+|.|.++  +|+|.|+|.|.|........
T Consensus         1 ~~l~c~v~g~P~P~v~W~kd-g~~l~~~~~~~~~~~~~L~I~~v~~~D~G~YtC~a~~~~~~~~~~   65 (72)
T cd07702           1 YRLTPKVKAFPAPEVIWLKD-GLPAAEKCSRYHVDGYSLVIKDVTEEDAGIYTILLGIKQYNLFKN   65 (72)
T ss_pred             CeEEeeEEEcCCCeEEEEEC-CEECCCCCcEEEeCCCEEEECcCCHHHCEEEEEEEEccccceEee
Confidence            47999999999999999999 6676554 556666779999999  69999999999986654443

Ig2_VEGFR-1: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 1 (VEGFR-1). VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-1 binds VEGF-A strongly; VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-1 may play an inhibitory rolet in the function of VEGFR-2 by binding VEGF-A and interfering with its interaction with VEGFR-2. VEGFR-1 has a signaling role in mediating monocyte chemotaxis and may mediate a chemotactic and a survival signal in hematopoietic stem cells or leukemia cells.

>cd04970 Ig6_Contactin_like Sixth Ig domain of contactin

Probab=99.11  E-value=4.2e-10  Score=91.41  Aligned_cols=70  Identities=20%  Similarity=0.369  Sum_probs=57.5

Q ss_pred             CCeEEEEEEccCCCC--eEEEeeCCccccCCC---Cce---e--ecceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771         121 SPLNLSCVAVGSPMP--FVKWRKGQNIELTPD---DKL---P--VGRNVLTLDRV--TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       121 ~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~~---~~~---~--~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      +++.|.|.+.|.|.|  .+.|+|+ +..+...   .++   .  ...+.|.|.++  +|+|.|+|.|.|..|..++++.|
T Consensus         1 e~~~L~C~~~g~P~p~i~~~W~~~-g~~i~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l   79 (85)
T cd04970           1 ESITLQCHASHDPTLDLTFTWSFN-GVPIDFDKDGGHYRRVGGKDSNGDLMIRNAQLKHAGKYTCTAQTVVDSLSASADL   79 (85)
T ss_pred             CcEEEEEEEecCCCCCeEEEEEEC-CeEeeccCCCccEEEEecccccceEEEccCCHHhCeeeEEEEecCCCcEEEEEEE
Confidence            468999999999988  5689999 6665432   111   1  24678999999  69999999999999999999999


Q ss_pred             EEE
Q psy8771         189 KVQ  191 (904)
Q Consensus       189 ~v~  191 (904)
                      .|.
T Consensus        80 ~V~   82 (85)
T cd04970          80 IVR   82 (85)
T ss_pred             EEE
Confidence            998

Ig6_Contactin_like: Sixth Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd05756 Ig1_IL1R_like First immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R) and similar proteins

Probab=99.11  E-value=2.9e-10  Score=93.30  Aligned_cols=75  Identities=19%  Similarity=0.290  Sum_probs=62.9

Q ss_pred             eEEecCCCeEEEEEEcc-----CCCCeEEEeeCCccccC----CCCceeecceEEEEeee--cCCeEEEEEEEecCcceE
Q psy8771         115 LEVMLDSPLNLSCVAVG-----SPMPFVKWRKGQNIELT----PDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIE  183 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g-----~p~p~i~W~k~~~~~~~----~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~  183 (904)
                      ..+.+|+++.|.|.+.|     .|.|.|.|+|+ +..+.    ...|+...++.|.|.++  +|+|.|+|.+.|..|..+
T Consensus         9 ~~v~~G~~~~L~C~~~g~~~~~~p~~~v~Wyk~-~~~~~~~~~~~~r~~~~~~~L~I~~~~~~DsG~Y~C~~~N~~g~~~   87 (94)
T cd05756           9 SYVLEGEPVVIKCPLFYSYIAQSPGLNLTWYKS-DGKTPIPTEERSRMHQQKDLLWFLPAALEDSGLYTCVVRNSTYCMK   87 (94)
T ss_pred             EEEecCCCeEEECCCCCcccccCCCceEEEEEc-CCCCcccccccceeeecCCeEEEccCCcccCeEEEEEEcCCCccEE
Confidence            78889999999999999     78999999999 44332    23555556789999998  799999999999999988


Q ss_pred             EEEEEEE
Q psy8771         184 TSTIVKV  190 (904)
Q Consensus       184 ~~~~l~v  190 (904)
                      ..+.|.|
T Consensus        88 ~~~~L~v   94 (94)
T cd05756          88 VSISLTV   94 (94)
T ss_pred             EEEEEEC
Confidence            8887765

Ig1_IL1R_like: domain similar to the first immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R). IL-1 alpha and IL-1 beta are cytokines which participate in the regulation of inflammation, immune responses, and hematopoiesis. These cytokines bind to the IL-1 receptor type 1 (IL1R1), which is activated on additional association with an accessory protein, IL1RAP. IL-1 also binds a second receptor designated type II (IL1R2). Mature IL1R1 consists of three Ig-like domains, a transmembrane domain, and a large cytoplasmic domain. Mature IL1R2 is organized similarly except that it has a short cytoplasmic domain. The latter does not initiate signal transduction. A naturally occurring cytokine IL-1RA (IL-1 receptor antagonist) is widely expressed and binds to IL-1 receptors, inhibiting the binding of IL-1 alpha and IL-1 beta.

>cd04971 Ig_TrKABC_d5 Fifth domain (immunoglobulin-like) of Trk receptors TrkA, TrkB and TrkC

Probab=99.11  E-value=3.4e-10  Score=89.94  Aligned_cols=65  Identities=22%  Similarity=0.346  Sum_probs=52.2

Q ss_pred             EEEEEEccCCCCeEEEeeCCccccCCCCceee-----------cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEE
Q psy8771         124 NLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----------GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVK  189 (904)
Q Consensus       124 ~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----------~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~  189 (904)
                      .|.|.+.|.|.|+|+|+|+ |..+..+.++..           ..+.|.|.++  +|+|.|+|.|.|..|..++...+.
T Consensus         2 ~i~~~v~G~P~P~v~W~k~-g~~i~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~YtC~A~N~~G~~~~~~~~~   79 (81)
T cd04971           2 CIPFTVRGNPKPTLTWYHN-GAVLNESDYIRTEIHYEVTTPTEYHGCLQFDNPTHVNNGNYTLVASNEYGQDSKSISAH   79 (81)
T ss_pred             eEEEEeEeeCCCcEEEEEC-CEECcCCCceeEEEEeecccccccEEEEEECCCCcccCeEEEEEEEeCCCCeeeEEEee
Confidence            4789999999999999999 777765543321           1447999999  699999999999999988766553

TrkABC_d5: the fifth domain of Trk receptors TrkA, TrkB and TrkC, this is an immunoglobulin (Ig)-like domain which binds to neurotrophin. The Trk family of receptors are tyrosine kinase receptors. They are activated by dimerization, leading to autophosphorylation of intracellular tyrosine residues, and triggering the signal transduction pathway. TrkA, TrkB, and TrkC share significant sequence homology and domain organization. The first three domains are leucine-rich domains. The fourth and fifth domains are Ig-like domains playing a part in ligand binding. TrkA, Band C mediate the trophic effects of the neurotrophin Nerve growth factor (NGF) family. TrkA is recognized by NGF. TrkB is recognized by brain-derived neurotrophic factor (BDNF) and neurotrophin (NT)-4. TrkC is recognized by NT-3. NT-3 is promiscuous as in some cell systems it activates TrkA and TrkB receptors. TrkA is a receptor foun

>cd05856 Ig2_FGFRL1-like Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor_like-1(FGFRL1)

Probab=99.10  E-value=4.3e-10  Score=91.19  Aligned_cols=75  Identities=32%  Similarity=0.526  Sum_probs=60.2

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee--ecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP--VGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~--~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      +.+..|+++.|.|.+.|.|.|.|.|+|+ +..+.......  .....|.|.++  +|+|.|+|.|.|..|..+....|.|
T Consensus         4 ~~~~~G~~v~L~C~~~g~p~p~i~W~k~-~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~~v~v   82 (82)
T cd05856           4 IARPVGSSVRLKCVASGNPRPDITWLKD-NKPLTPTEIGESRKKKWTLSLKNLKPEDSGKYTCHVSNRAGEINATYKVDV   82 (82)
T ss_pred             eeccCCCeEEEEEEeeEeCCCcEEEEEC-CcCCcCCccceecCceEEEEEccCChhhCEEEEEEEEcCCccEEEEEEEeC
Confidence            5677899999999999999999999999 55554332222  24468999999  6999999999999998877766653

Ig2_FGFRL1-like: second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor_like-1(FGFRL1). FGFRL1 is comprised of a signal peptide, three extracellular Ig-like modules, a transmembrane segment, and a short intracellular domain. FGFRL1 is expressed preferentially in skeletal tissues. Similar to FGF receptors, the expressed protein interacts specifically with heparin and with FGF2. FGFRL1 does not have a protein tyrosine kinase domain at its C terminus; neither does its cytoplasmic domain appear to interact with a signaling partner. It has been suggested that FGFRL1 may not have any direct signaling function, but instead acts as a decoy receptor trapping FGFs and preventing them from binding other receptors.

>cd05858 Ig3_FGFR-2 Third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor 2 (FGFR2)

Probab=99.09  E-value=4.7e-10  Score=92.13  Aligned_cols=71  Identities=27%  Similarity=0.533  Sum_probs=55.3

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCC---ccccCCCCc--eee-----------cceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQ---NIELTPDDK--LPV-----------GRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~---~~~~~~~~~--~~~-----------~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      |+.++|+|.+.|.|.|.|+|+|+.   +..+..+.+  ..+           ....|.|.++  +|+|.|+|.|.|..|.
T Consensus         1 G~~v~L~C~~~g~P~P~i~W~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~   80 (90)
T cd05858           1 GSTVEFVCKVYSDAQPHIQWLKHVEKNGSKYGPDGLPYVTVLKTAGVNTTDKEMEVLYLRNVTFEDAGEYTCLAGNSIGI   80 (90)
T ss_pred             CCeEEEEEEEecCCCCEEEEEEecccCCcEeCCCCCeeEEEeccCCceecCCceeEEEEccCCHHHCEEEEEEEEeCCCc
Confidence            688999999999999999999841   332322111  111           1247999999  6999999999999999


Q ss_pred             eEEEEEEEE
Q psy8771         182 IETSTIVKV  190 (904)
Q Consensus       182 ~~~~~~l~v  190 (904)
                      ..+++.|.|
T Consensus        81 ~~~~a~L~V   89 (90)
T cd05858          81 SHHSAWLTV   89 (90)
T ss_pred             ccceEEEEE
Confidence            999999887

Ig3_FGFR-2-like; domain similar to the third immunoglobulin (Ig)-like domain of human fibroblast growth factor receptor 2 (FGFR2). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for FGFs. FGFR2 is required for male sex determination.

>KOG4194|consensus

Probab=99.09  E-value=3.4e-09  Score=109.68  Aligned_cols=181  Identities=19%  Similarity=0.283  Sum_probs=129.5

Q ss_pred             Ccceeeeccc-----eEEEEecCCCCCc---ceeeEeeCCCCCCCCcEEEeccCCceEEEEeCCCCC-------------
Q psy8771           2 DTRCYVESPE-----EVFIILCPLPPLI---PGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETP-------------   60 (904)
Q Consensus         2 ~~~~~~~~~~-----~~~~~~~~~~p~~---~~~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~~-------------   60 (904)
                      .|||||.+-=     +.+.+-....|..   |..+...  .+.-..+.|...+.+.++|.|.+....             
T Consensus       588 rYQCVvtN~FGStysqk~KltV~~~PsFtktP~dltl~--tg~mArl~CaAtG~P~PeIawqkdggtdFPAA~eRRl~Vm  665 (873)
T KOG4194|consen  588 RYQCVVTNHFGSTYSQKAKLTVNQAPSFTKTPEDLTLR--TGQMARLECAATGHPRPEIAWQKDGGTDFPAARERRLHVM  665 (873)
T ss_pred             eEEEEEecccCcchhheeEEEeeccCccccCcccceee--cccceeeeeeccCCCCcceeehhcCCCCCchhhhheeeec
Confidence            4899998743     2333333333322   3333322  235667889999999999999877433             


Q ss_pred             --CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCC-CeE
Q psy8771          61 --NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPM-PFV  137 (904)
Q Consensus        61 --~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i  137 (904)
                        +..+-.......|.+.+.|...+.+++..+.+.+.|     ...|.+..+..+ ..+..|+.+.|+|.+.|.|. |.+
T Consensus       666 pedd~f~Itnvk~eD~GiYtC~A~n~AG~isanAtL~V-----~e~p~f~~PL~~-~~V~~get~vlqC~a~~~~a~pr~  739 (873)
T KOG4194|consen  666 PEDDVFFITNVKIEDQGIYTCTAQNVAGQISANATLTV-----LETPSFSIPLED-QLVVVGETLVLQCLAEGAPADPRL  739 (873)
T ss_pred             CCCCEEEEecccccccceeEEeeeccccceeeceEEEE-----ecCCcccccccc-eEEEecceEEEEEecCCCCCCccc
Confidence              222233334555667777888888888888888887     456777777888 99999999999999999998 999


Q ss_pred             EEeeCCcccc--CCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         138 KWRKGQNIEL--TPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       138 ~W~k~~~~~~--~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      .|+|+ ..++  .+...+..++.-|.+.+.  +|+|.|+|...|..|.......+.+.
T Consensus       740 ~W~k~-d~pil~t~rh~f~d~dQllvv~~~~~~daG~yTcem~~~~~~~~~~i~l~~~  796 (873)
T KOG4194|consen  740 EWFKE-DKPILITERHTFPDGDQLLVVKENLVEDAGIYTCEMSNTLGTERIHICLLVY  796 (873)
T ss_pred             cccCC-CCceEEeecccCCCCCeEEEEEehhhhhcceEEEEEEeeccceeeEEEEEEe
Confidence            99998 4443  333344456677777775  89999999999999987777777666

>cd04967 Ig1_Contactin First Ig domain of contactin

Probab=99.08  E-value=8.4e-10  Score=90.96  Aligned_cols=78  Identities=24%  Similarity=0.542  Sum_probs=61.9

Q ss_pred             CeEEcCCCCceEEecC---CCeEEEEEEccCCCCeEEEeeCCccccC--CCCceeecceEEEEeee---cCCeEEEEEEE
Q psy8771         105 PQFSIPPPALLEVMLD---SPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPVGRNVLTLDRV---TESENYTCIAA  176 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g---~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~~~~~l~i~~l---~d~g~Y~c~a~  176 (904)
                      |.|...|.+ +.+.++   +.+.|.|.+.|+|.|.|+|+|+ +..+.  ...++...++.|.|.++   +|+|.|+|.|.
T Consensus         2 P~f~~~p~~-~~~~~~~~~~~~~l~C~~~g~p~p~i~W~k~-~~~l~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~   79 (91)
T cd04967           2 PVFEEQPDD-TIFPEESDEGKVSLNCRARGSPPPTYRWLMN-GTEIDDEPDSRYSLVGGNLVISNPSKAKDAGRYQCLAS   79 (91)
T ss_pred             CeeEeCCCC-EEccCCCCCCEEEEEEeeeEcCCCEEEEEEC-CEECCCCCCCCEEEECCEEEEecCCccCCCEEEEEEEE
Confidence            567777777 655443   5799999999999999999999 66553  24556667788999876   59999999999


Q ss_pred             ecCcceEE
Q psy8771         177 SVLGVIET  184 (904)
Q Consensus       177 n~~g~~~~  184 (904)
                      |..|...+
T Consensus        80 N~~G~~~S   87 (91)
T cd04967          80 NIVGTVLS   87 (91)
T ss_pred             cCCCEEEe
Confidence            99997554

Ig1_Contactin: First Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 weeks postnata

>cd04977 Ig1_NCAM-1_like First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1 and similar proteins

Probab=99.07  E-value=1e-09  Score=90.32  Aligned_cols=80  Identities=23%  Similarity=0.439  Sum_probs=60.2

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----cceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----GRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      ..|.+ ..+..|+.+.|.|.+.|.|. .|+|+++++..+....++..     ....|+|.++  +|+|.|+|.|.|..|.
T Consensus         5 v~p~~-~~v~~G~~~~l~C~~~G~p~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~g~   82 (92)
T cd04977           5 IVPSQ-GEISVGESKFFLCQVIGEPK-DISWFSPNGEKLVTQQQISVVQNDDVRSTLTIYNANIEDAGIYKCVATDAKGT   82 (92)
T ss_pred             EecCc-EEECCCCeEEEEEEeEeeCC-eEEEECCCCCEeccCCCEEEEeCCCCEEEEEEecCCcccCEEEEEEEEcCCCC
Confidence            34556 88999999999999999985 89999853655544334332     2348999999  6999999999998754


Q ss_pred             -eEEEEEEEE
Q psy8771         182 -IETSTIVKV  190 (904)
Q Consensus       182 -~~~~~~l~v  190 (904)
                       .++++.|.|
T Consensus        83 ~~~~sv~l~~   92 (92)
T cd04977          83 ESEATVNLKI   92 (92)
T ss_pred             cceeEEEEEC
Confidence             566666543

Ig1_NCAM-1 like: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1. NCAM-1 plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-nonNCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves the Ig1, Ig2, and Ig3 domains. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the s

>PHA02785 IL-beta-binding protein; Provisional

Probab=99.07  E-value=1.2e-08  Score=105.92  Aligned_cols=156  Identities=11%  Similarity=0.125  Sum_probs=94.3

Q ss_pred             eEEecCCCeEEEEEE-----ccCCCCeEEEeeCCccccCCCCceeecce-EEEEeee--cCCeEEEEEEEecCcceEEEE
Q psy8771         115 LEVMLDSPLNLSCVA-----VGSPMPFVKWRKGQNIELTPDDKLPVGRN-VLTLDRV--TESENYTCIAASVLGVIETST  186 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~-----~g~p~p~i~W~k~~~~~~~~~~~~~~~~~-~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~  186 (904)
                      ..+.+|+++.|.|.+     .|.|.++|+|+|+ +....  .++...++ .|.|.++  +|+|.|+|.|.|..|....++
T Consensus        36 ~~~~~ge~~~l~C~~~~~~~~g~p~~~i~W~K~-g~~~~--~~~~~~~g~~l~i~~~~~~DsG~Y~C~a~N~~g~~~~s~  112 (326)
T PHA02785         36 FMELENEPVILPCPQINTLSSGYNILDILWEKR-GADND--RIIPIDNGSNMLILNPTQSDSGIYICITKNETYCDMMSL  112 (326)
T ss_pred             hhhhcCCCEEEECCCccccccCCCCceEEEEEC-CCccc--eEEEccCCceEEEcccCcccCeEEEEEEECCCcceEEEE
Confidence            566789999999997     6999999999999 43221  23333333 4888877  699999999999999888888


Q ss_pred             EEEEEeecCCCCCCCCCCcceEEEeecCCeEEEE----EeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCC
Q psy8771         187 IVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLD----WTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSP  262 (904)
Q Consensus       187 ~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~----W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p  262 (904)
                      .|.|.....+.+..  .+....+.......+.|.    |...+   ..-.|.|...... ............+.|.+++.
T Consensus       113 ~L~V~~~~~~~~~~--~~~~~~~~~g~~~~i~C~~~~~~~~~~---~~~~i~W~k~~~~-~~~r~~~~~~~~L~i~~v~~  186 (326)
T PHA02785        113 NLTIVSVSESNIDL--ISYPQIVNERSTGEMVCPNINAFIASN---VNADIIWSGHRRL-RNKRLKQRTPGIITIEDVRK  186 (326)
T ss_pred             EEEEEecCCCccce--eeccceecccCcEEEECCChhhcccCC---CCceEEEccCCcc-CCcceEecCCCeEEEeecCh
Confidence            88887322111111  111112222222223331    11111   1112333221110 00111111235799999999


Q ss_pred             CCeEEEEEEEEcCCCCC
Q psy8771         263 YTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       263 ~~~Y~~~v~a~n~~g~s  279 (904)
                      .+.+.|+|.|.|..|..
T Consensus       187 ~d~G~Y~C~~~n~~g~~  203 (326)
T PHA02785        187 NDAGYYTCVLKYIYGDK  203 (326)
T ss_pred             hhCeEEEEEEEeccCCE
Confidence            99999999999987753

>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []

Probab=99.05  E-value=9e-10  Score=90.12  Aligned_cols=83  Identities=39%  Similarity=0.694  Sum_probs=69.2

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEeCC
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFTSV  562 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~~  562 (904)
                      +|.++++..++.+++.|+|+++...++.+.+|.|+|+...+..  .+..... .....+.+.+|.|++.|.|+|+|++..
T Consensus         2 ~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~   79 (85)
T PF00041_consen    2 APENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS--DWQEVTVPGNETSYTITGLQPGTTYEFRVRAVNSD   79 (85)
T ss_dssp             SSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSS--EEEEEEEETTSSEEEEESCCTTSEEEEEEEEEETT
T ss_pred             cCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccce--eeeeeeeeeeeeeeeeccCCCCCEEEEEEEEEeCC
Confidence            6889999999999999999998766789999999999887543  2333333 555689999999999999999999999


Q ss_pred             CCCCCC
Q psy8771         563 GPGPLS  568 (904)
Q Consensus       563 g~~~~S  568 (904)
                      |.|++|
T Consensus        80 g~g~~S   85 (85)
T PF00041_consen   80 GEGPPS   85 (85)
T ss_dssp             EEEEEE
T ss_pred             cCcCCC
Confidence            877654

They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....

>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []

Probab=99.04  E-value=7.7e-10  Score=90.53  Aligned_cols=83  Identities=27%  Similarity=0.498  Sum_probs=70.8

Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc-cc-eEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA-KH-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      ++|.+|++..++.+++.|+|.++...++.+.+|.|+|+...... .. .........+.|.+|.|++.|.|+|+|++..|
T Consensus         1 s~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~g   80 (85)
T PF00041_consen    1 SAPENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDWQEVTVPGNETSYTITGLQPGTTYEFRVRAVNSDG   80 (85)
T ss_dssp             SSSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSSEEEEEEEETTSSEEEEESCCTTSEEEEEEEEEETTE
T ss_pred             CcCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccceeeeeeeeeeeeeeeeeccCCCCCEEEEEEEEEeCCc
Confidence            47899999999999999999998777889999999999987776 32 33344455999999999999999999999998


Q ss_pred             CCCCC
Q psy8771         700 EGATT  704 (904)
Q Consensus       700 ~~~~s  704 (904)
                      .|++|
T Consensus        81 ~g~~S   85 (85)
T PF00041_consen   81 EGPPS   85 (85)
T ss_dssp             EEEEE
T ss_pred             CcCCC
Confidence            87653

They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....

>cd05736 Ig2_Follistatin_like Second immunoglobulin (Ig)-like domain of a follistatin-like molecule encoded by the Mahya gene and similar proteins

Probab=98.99  E-value=1.9e-09  Score=85.40  Aligned_cols=68  Identities=32%  Similarity=0.621  Sum_probs=55.9

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCC--Cceee--cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPD--DKLPV--GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +.|.|.+.|.|.|.|.|+|+ +..+...  .++..  +...|.|.++  +|.|.|+|.|.|..|..+..+.|.|.
T Consensus         1 ~~L~C~v~g~P~p~v~W~k~-~~~l~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~   74 (76)
T cd05736           1 ASLRCHAEGIPLPRLTWLKN-GMDITPKLSKQLTLIANGSELHISNVRYEDTGAYTCIAKNEAGVDEDISSLFVE   74 (76)
T ss_pred             CEeEeEeeecCCCEEEEEEC-CEECCCCCCccEEEeCCCCEEEECcCCcccCEEEEEEEEcCCCCcceEEEEEEE
Confidence            47999999999999999999 5555443  23332  3347999999  69999999999999999999999886

Ig2_Follistatin_like: domain similar to the second immunoglobulin (Ig)-like domain found in a follistatin-like molecule encoded by the CNS-related Mahya gene. Mahya genes have been retained in certain Bilaterian branches during evolution. They are conserved in Hymenoptera and Deuterostomes, but are absent from other metazoan species such as fruit fly and nematode. Mahya proteins are secretory, with a follistatin-like domain (Kazal-type serine/threonine protease inhibitor domain and EF-hand calcium-binding domain), two Ig-like domains, and a novel C-terminal domain. Mahya may be involved in learning and memory and in processing of sensory information in Hymenoptera and vertebrates. Follistatin is a secreted, multidomain protein that binds activins with high affinity and antagonizes their signaling.

>cd05874 Ig6_NrCAM Sixth immunoglobulin (Ig)-like domain of NrCAM (Ng (neuronglia) CAM-related cell adhesion molecule)

Probab=98.98  E-value=2e-09  Score=84.82  Aligned_cols=61  Identities=21%  Similarity=0.475  Sum_probs=48.3

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccC--CCCceee--cceEEEEeeec------CCeEEEEEEEecCcceEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPV--GRNVLTLDRVT------ESENYTCIAASVLGVIET  184 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~--~~~~l~i~~l~------d~g~Y~c~a~n~~g~~~~  184 (904)
                      +.|.|.+.|.|.|+|+|+|+ +..+.  ...++..  .+++|.|..+.      |.|.|+|.|.|..|...+
T Consensus         1 ~~l~C~a~G~P~P~i~W~k~-g~~l~~~~~~~~~~~~~~g~l~i~~~~~~~~~~d~G~Y~C~A~N~~G~~~s   71 (77)
T cd05874           1 IVIQCEAKGKPPPSFSWTRN-GTHFDIDKDPKVTMKPNTGTLVINIMNGEKAEAYEGVYQCTARNERGAAVS   71 (77)
T ss_pred             CEEEeeCcccCCCeEEEEEC-CeECCCcCCCCEEEeCCCceEEEeccccCCCCCCCEEEEEEEEcCCCeEEe
Confidence            47999999999999999999 66552  2333433  57889998773      689999999999998655

Ig6_NrCAM: sixth immunoglobulin (Ig)-like domain of NrCAM (Ng (neuronglia) CAM-related cell adhesion molecule). NrCAM belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region, and an intracellular domain. NrCAM is primarily expressed in the nervous system.

>cd05765 Ig_3 Subgroup of the immunoglobulin (Ig) superfamily

Probab=98.98  E-value=2.2e-09  Score=86.57  Aligned_cols=71  Identities=20%  Similarity=0.426  Sum_probs=55.2

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCc--cc--cCCC---Ccee-ecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQN--IE--LTPD---DKLP-VGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVK  189 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~--~~--~~~~---~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~  189 (904)
                      |+.+.|.|.+.|.|.|.|+|+|+..  ..  +...   .++. .+.+.|.|.++  +|+|.|+|.|.|..|...+.+.|.
T Consensus         1 G~~v~l~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~   80 (81)
T cd05765           1 GETASFHCDVTGRPPPEITWEKQVHGKENLIMRPNHVRGNVVVTNIGQLVIYNAQPQDAGLYTCTARNSGGLLRANFPLS   80 (81)
T ss_pred             CCcEEEEeeccccCCCcEEEEecCCCCcceeecCCcccCCEEEccccEEEEccCCcccCEEEEEEEecCCceEEEEEEEe
Confidence            7899999999999999999999721  11  1111   1122 24568999999  699999999999999988888876


Q ss_pred             E
Q psy8771         190 V  190 (904)
Q Consensus       190 v  190 (904)
                      |
T Consensus        81 v   81 (81)
T cd05765          81 V   81 (81)
T ss_pred             C
Confidence            5

Ig_3: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05754 Ig3_Perlecan_like Third immunoglobulin (Ig)-like domain found in Perlecan and similar proteins

Probab=98.97  E-value=4.1e-09  Score=85.63  Aligned_cols=76  Identities=21%  Similarity=0.352  Sum_probs=61.9

Q ss_pred             cCCCCceEEecCCCeEEEEEEcc-CCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEE
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVG-SPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETS  185 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~  185 (904)
                      ..|.. +.+.+|+.++|.|.+.+ .|.+.|.|+++ +..+..  +....++.|.|.++  +|+|.|.|.|.|..|..++.
T Consensus         6 ~~p~~-~~v~~G~~v~L~C~~~~~~~~~~i~W~~~-~~~~~~--~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~   81 (85)
T cd05754           6 EEPRS-QEVRPGADVSFICRAKSKSPAYTLVWTRV-GGGLPS--RAMDFNGILTIRNVQLSDAGTYVCTGSNMLDTDEAT   81 (85)
T ss_pred             cCCCc-eEEcCCCCEEEEEEcCCCCCCcEEEEEEC-CCcCCC--cccccCCEEEECCCCHHHCEEEEEEEeccCCeEeEE
Confidence            44555 89999999999999975 78899999998 444433  22335678999999  69999999999999999888


Q ss_pred             EEE
Q psy8771         186 TIV  188 (904)
Q Consensus       186 ~~l  188 (904)
                      +.|
T Consensus        82 ~~l   84 (85)
T cd05754          82 ATL   84 (85)
T ss_pred             EEE
Confidence            776

Ig3_Perlecan_like: domain similar to the third immunoglobulin (Ig)-like domain found in Perlecan. Perlecan is a large multi-domain heparin sulfate proteoglycan, important in tissue development and organogenesis. Perlecan can be represented as 5 major portions; its fourth major portion (domain IV) is a tandem repeat of immunoglobulin-like domains (Ig2-Ig15), which can vary in size due to alternative splicing. Perlecan binds many cellular and extracellular ligands. Its domain IV region has many binding sites. Some of these have been mapped at the level of individual Ig-like domains, including a site restricted to the Ig5 domain for heparin/sulfatide, a site restricted to the Ig3 domain for nidogen-1 and nidogen-2, a site restricted to Ig4-5 for fibronectin, and sites restricted to Ig2 and to Ig13-15 for fibulin-2.

>cd05734 Ig7_DSCAM Seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)

Probab=98.97  E-value=2.2e-09  Score=85.73  Aligned_cols=67  Identities=21%  Similarity=0.467  Sum_probs=51.3

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccC-------CCCceee-cceEEEEeee--cCCeEEEEEEEecCcce-EEEEEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELT-------PDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVI-ETSTIVK  189 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~-------~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~-~~~~~l~  189 (904)
                      ++|.|.+.|.|.|.|+|+|+++....       ...|+.. .+++|.|.++  +|.|.|+|.|.|..|.. +..+.|.
T Consensus         1 v~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~s~~~~l~   78 (79)
T cd05734           1 VTLNCSAEGYPPPTIVWKHSKGRGHPQHTHTCCLAGRIQLLSNGSLLIKHVLEEDSGYYLCKVSNDVGADASKSMVLT   78 (79)
T ss_pred             CEeEeeCeEeCCCEEEEEECCCccccccccccccCCCEEEecCCeEEECcCCcccCEEEEEEEEeCCCCCCceEEEEe
Confidence            57999999999999999996332211       2345443 5689999999  69999999999999985 4555554

Ig7_DSCAM: the seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM). DSCAM is a cell adhesion molecule expressed largely in the developing nervous system. The gene encoding DSCAM is located at human chromosome 21q22, the locus associated with the mental retardation phenotype of Down Syndrome. DSCAM is predicted to be the largest member of the IG superfamily. It has been demonstrated that DSCAM can mediate cation-independent homophilic intercellular adhesion.

>cd05873 Ig_Sema4D_like Immunoglobulin (Ig)-like domain of the class IV semaphorin Sema4D

Probab=98.96  E-value=5.8e-09  Score=83.12  Aligned_cols=66  Identities=21%  Similarity=0.380  Sum_probs=55.6

Q ss_pred             CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-CceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         111 PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPVGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      |.+ +.+..|+++.|.|.+.+ |.+.|+|+++ |..+..+ .++.+.++.|.|.++  +|+|.|+|.|.+..
T Consensus         3 P~~-~~v~~G~~v~L~C~~~~-~~~~i~W~~n-g~~i~~~~~r~~~~~~~L~I~nv~~~DsG~Y~C~a~e~~   71 (87)
T cd05873           3 PRQ-RTFKLGNNAELKCSPKS-NLARVVWKFD-GKVLTPESAKYLLYRDGLLIFNASEADAGRYQCLSVEKS   71 (87)
T ss_pred             cce-EEEECCCCEEEEEECCC-CCCeEEEEEC-CEECCCCCceEEEECCcEEEeCCCHHHCEEEEEEEEecc
Confidence            556 89999999999999854 7789999999 7666554 577778889999999  69999999998753

Ig_Sema4D_like; Immunoglobulin (Ig)-like domain of Sema4D. Sema4D is a Class IV semaphorin. Semaphorins are classified based on structural features additional to the Sema domain. Sema4D has extracellular Sema and Ig domains, a transmembrane domain, and a short cytoplasmic domain. Sema4D plays a part in the development of GABAergic synapses. Sema4D in addition is an immune semaphorin. It is abundant on resting T cells; its expression is weak on resting B cells and antigen presenting cells (APCs), but is upregulated by various stimuli. The receptor used by Sema4D in the immune system is CD72. Sem4D enhances the activation of B cells and DCs through binding CD72, perhaps by reducing CD72s inhibitory signals. The receptor used by Sema4D in the non-lymphatic tissues is plexin-B1. Sem4D is anchored to the cell surface but its extracellular domain can be released from the cell surface by a metalloproteas

>PHA02826 IL-1 receptor-like protein; Provisional

Probab=98.95  E-value=1.3e-08  Score=98.60  Aligned_cols=148  Identities=10%  Similarity=0.122  Sum_probs=97.1

Q ss_pred             eEEecCCCeEEEEEEccCCC-----------CeEEEeeCCccccC--CCCc----------eeecceEEEEeee--cCCe
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM-----------PFVKWRKGQNIELT--PDDK----------LPVGRNVLTLDRV--TESE  169 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~-----------p~i~W~k~~~~~~~--~~~~----------~~~~~~~l~i~~l--~d~g  169 (904)
                      +.+.+|+++.|.|.+.+.|+           +.|.|+|++...+.  .+.|          +...+++|.|.++  +|+|
T Consensus        32 ~~v~eGe~v~L~C~~~~~~~~~~~~~~~~~~~~V~W~k~~s~~~v~~~~~~~~~~~i~~~~~~~r~~~L~I~~v~~~DsG  111 (227)
T PHA02826         32 VYAKFGDPMVLLCTGKHYKKSIFFDKTFITSYNVTWSKTDSLAFVRDSGARTKIKKITHNEIGDRSENLWIGNVINIDEG  111 (227)
T ss_pred             EEecCCCCEEEEccccccccccccccccCCCccEEEEeCCeEEEEEcCCCccccccccccceecCCCeEEECCCChHHCE
Confidence            88899999999999988653           48999998432111  1111          1223579999999  6999


Q ss_pred             EEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCcc---ceEEEEEEEeCCCC----C
Q psy8771         170 NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAAN----T  242 (904)
Q Consensus       170 ~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~---~~~y~v~~~~~~~~----~  242 (904)
                      .|+|.|.|..|..+....|.|.       ..   +.++.+.  ....+.|.+...++.   .....|.|..++..    .
T Consensus       112 ~Y~C~a~N~~~~~~~~i~L~V~-------~~---~~~~~~~--~G~~v~L~C~~~~~~~~~~p~p~I~WyKng~~l~~~~  179 (227)
T PHA02826        112 IYICTISSGNICEESTIRLTFD-------SG---TINYQFN--SGKDSKLHCYGTDGISSTFKDYTLTWYKNGNIVLYTD  179 (227)
T ss_pred             EEEEEEEECCcceEEEEEEEEe-------cC---CccceEe--cCCCEEEEeeCCCCccccCCCceEEEEECCEECCCCC
Confidence            9999999988888888888876       21   2233332  234566666543211   11234555544321    1


Q ss_pred             CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771         243 PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNL  276 (904)
Q Consensus       243 ~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~  276 (904)
                      .+. +. .....+.|.+++..+.+.|+|.|....
T Consensus       180 r~~-~~-~~~~~L~I~~V~~~DsG~YtC~a~~~~  211 (227)
T PHA02826        180 RIQ-LR-NNNSTLVIKSATHDDSGIYTCNLRFNK  211 (227)
T ss_pred             CEE-Ee-CCCCEEEECcCCHHhCEEEEEEEEEeE
Confidence            111 11 223579999999999999999998864

>cd05875 Ig6_hNeurofascin_like Sixth immunoglobulin (Ig)-like domain of human neurofascin (NF)

Probab=98.95  E-value=3.1e-09  Score=83.76  Aligned_cols=62  Identities=23%  Similarity=0.513  Sum_probs=48.9

Q ss_pred             eEEEEEEccCCCCeEEEeeCCcccc--CCCCceee--cceEEEEeee-----c-CCeEEEEEEEecCcceEEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIEL--TPDDKLPV--GRNVLTLDRV-----T-ESENYTCIAASVLGVIETS  185 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~--~~~~~~~~--~~~~l~i~~l-----~-d~g~Y~c~a~n~~g~~~~~  185 (904)
                      +.|+|.+.|.|.|.|+|+|+ +..+  ..+.++.+  .+++|.|.++     + |+|.|+|.|.|..|...+.
T Consensus         1 ~~l~C~~~G~P~P~v~W~k~-g~~~~~~~~~~~~~~~~~~~L~i~~~~~~~~~~d~G~Y~C~A~N~~G~~~s~   72 (77)
T cd05875           1 IIIECEAKGNPVPTFQWTRN-GKFFNVAKDPRVSMRRRSGTLVIDFSGGGRPEDYEGEYQCFARNNLGTALSN   72 (77)
T ss_pred             CEEEEeccccCCCEEEEEEC-CEEccCcCCCcEEEeCCCceEEEeccCCCCCCCCCEEEEEEEEeccceEEEE
Confidence            47999999999999999999 6544  33444443  5789999875     2 5899999999999986543

Ig6_hNeurofascin_like: the sixth immunoglobulin (Ig)-like domain of human neurofascin (NF). NF belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region, and a cytoplasmic domain. NF has many alternatively spliced isoforms having different temporal expression patterns during development. NF participates in axon subcellular targeting and synapse formation, however little is known of the functions of the different isoforms.

>cd05733 Ig6_L1-CAM_like Sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins

Probab=98.93  E-value=2.5e-09  Score=84.69  Aligned_cols=61  Identities=25%  Similarity=0.603  Sum_probs=48.7

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCC--CCceee--cceEEEEeee------cCCeEEEEEEEecCcceEE
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTP--DDKLPV--GRNVLTLDRV------TESENYTCIAASVLGVIET  184 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~--~~~~~~--~~~~l~i~~l------~d~g~Y~c~a~n~~g~~~~  184 (904)
                      +.|.|.+.|.|.|.|+|+|+ +..+..  ..++..  .++.|.|.++      +|+|.|+|.|.|..|...+
T Consensus         1 i~l~C~~~G~P~P~v~W~k~-g~~l~~~~~~~~~~~~~~g~L~i~~~~~~~~~~d~G~Y~C~A~N~~G~~~s   71 (77)
T cd05733           1 IVIKCEAKGNPPPTFSWTRN-GTHFDPEKDPRVTMKPDSGTLVIDNMNGGRAEDYEGEYQCYASNELGTAIS   71 (77)
T ss_pred             CEEEeeCcccCCCeEEEEEC-CeECCCCCCCCEEEeCCCCEEEEeccCCCCCcCCCEEEEEEEEcCCCcEEc
Confidence            47999999999999999999 666542  234433  5689999886      3789999999999998544

Ig6_L1-CAM_like: domain similar to the sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains NrCAM [Ng(neuronglia)CAM-related cell adhesion molecule], which is primarily expressed in the nervous system, and human neurofascin.

>cd05882 Ig1_Necl-1 First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molcule-1 (Necl-1, also known as cell adhesion molecule3 (CADM3))

Probab=98.93  E-value=5.6e-09  Score=85.64  Aligned_cols=75  Identities=17%  Similarity=0.372  Sum_probs=56.6

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCcccc-------CCCCceee-----cceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIEL-------TPDDKLPV-----GRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~-------~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      +++.+|+++.|.|.+.|.|.|.|.|+|+++..+       ....|+.+     .+.+|.|.++  +|+|.|+|.+.. .-
T Consensus         7 ~tv~~G~tv~L~C~v~g~~~~~v~W~k~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~nV~~~D~G~YtC~~~t-~~   85 (95)
T cd05882           7 ETVAVGGTVTLKCGVKEHDNSSLQWSNTAQQTLYFGEKRALRDNRIQLVKSTPTELIISISNVQLSDEGEYTCSIFT-MP   85 (95)
T ss_pred             EEEecCCcEEEEEEEeCCCCCeEEEeccCccEEEeCCeEEEeCCeEEEEeCCCceEEEEECCCCcccCEEEEEEEEe-ec
Confidence            899999999999999999999999999843221       12244442     2468999999  799999999987 33


Q ss_pred             ceEEEEEEEE
Q psy8771         181 VIETSTIVKV  190 (904)
Q Consensus       181 ~~~~~~~l~v  190 (904)
                      ..++.+.|.|
T Consensus        86 ~~~~~~~~~v   95 (95)
T cd05882          86 VRTAKATVTV   95 (95)
T ss_pred             cccEEEEEEC
Confidence            4555555543

Ig1_Necl-1: domain similar to the N-terminal immunoglobulin (Ig)-like domain of nectin-like molecule-1, Necl-1 (also known as celll adhesion molecule 3 (CADM3), SynCAM2, IGSF4). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). They all have an extracellular region containing three Ig-like domains, a transmembrane region, and a cytoplasmic region. The N-terminal Ig-like domain of the extracellular region belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-1 has Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-1 is specifically expressed in neural tissue, and is important to the format

>PHA02826 IL-1 receptor-like protein; Provisional

Probab=98.92  E-value=3.6e-08  Score=95.45  Aligned_cols=105  Identities=10%  Similarity=0.039  Sum_probs=72.2

Q ss_pred             eecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc-----CCCCeEE
Q psy8771          64 ITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG-----SPMPFVK  138 (904)
Q Consensus        64 i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-----~p~p~i~  138 (904)
                      +........|.+...|.+.+........+.+.|.+           .+.+ ..+.+|+.+.|.|.+.+     .|.|+|+
T Consensus       100 L~I~~v~~~DsG~Y~C~a~N~~~~~~~~i~L~V~~-----------~~~~-~~~~~G~~v~L~C~~~~~~~~~~p~p~I~  167 (227)
T PHA02826        100 LWIGNVINIDEGIYICTISSGNICEESTIRLTFDS-----------GTIN-YQFNSGKDSKLHCYGTDGISSTFKDYTLT  167 (227)
T ss_pred             EEECCCChHHCEEEEEEEEECCcceEEEEEEEEec-----------CCcc-ceEecCCCEEEEeeCCCCccccCCCceEE
Confidence            33333444466666677666443334444444421           1123 67789999999999873     4679999


Q ss_pred             EeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         139 WRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       139 W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      |+|+ +..+..+.++.+  +++.|.|.++  +|+|.|+|.|....+.
T Consensus       168 WyKn-g~~l~~~~r~~~~~~~~~L~I~~V~~~DsG~YtC~a~~~~~g  213 (227)
T PHA02826        168 WYKN-GNIVLYTDRIQLRNNNSTLVIKSATHDDSGIYTCNLRFNKNS  213 (227)
T ss_pred             EEEC-CEECCCCCCEEEeCCCCEEEECcCCHHhCEEEEEEEEEeECC
Confidence            9999 777766666664  4568999999  6999999999886544

>cd05752 Ig1_FcgammaR_like Frst immunoglobulin (Ig)-like domain of Fcgamma-receptors (FcgammaRs) and similar proteins

Probab=98.90  E-value=5.7e-09  Score=82.09  Aligned_cols=66  Identities=20%  Similarity=0.398  Sum_probs=53.5

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCC-CeEEEeeCCccccCCCCceeecceEEEEeee-cCCeEEEEEEEec
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPM-PFVKWRKGQNIELTPDDKLPVGRNVLTLDRV-TESENYTCIAASV  178 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l-~d~g~Y~c~a~n~  178 (904)
                      |.+...|.. ..+.+|++++|.|.+.|.|. +.+.|+|+ +..+.      ...+.|.|.++ +|+|.|+|.|.|.
T Consensus         1 ~vv~~~P~~-~~v~~G~~V~L~C~~~~~p~~~~~~W~kn-g~~l~------~~~~~l~i~~~~~dsG~Y~C~a~~~   68 (78)
T cd05752           1 AVVSLDPPW-TTIFQGEKVTLTCNGFNSPEQNSTQWYHN-GKLLE------TTTNSYRIRAANNDSGEYRCQTQGS   68 (78)
T ss_pred             CeEEeCCCC-eEeeCCCCEEEEEeCCCCCCCccEEEEEC-CEEee------ccCCeEEEeecccCCEEeEEECCCC
Confidence            345666666 89999999999999999987 46999999 65542      24567888886 8999999999874

Ig1_FcgammaR_like: domain similar to the first immunoglobulin (Ig)-like domain of Fcgamma-receptors (FcgammaRs). Interactions between IgG and FcgammaR are important to the initiation of cellular and humoral response. IgG binding to FcgammaR leads to a cascade of signals and ultimately to functions such as antibody-dependent-cellular-cytotoxicity (ADCC), endocytosis, phagocytosis, release of inflammatory mediators, etc. FcgammaR has two Ig-like domains. This group also contains FcepsilonRI, which binds IgE with high affinity.

>cd05750 Ig_Pro_neuregulin Immunoglobulin (Ig)-like domain in neuregulins (NRGs)

Probab=98.89  E-value=5.2e-09  Score=82.90  Aligned_cols=64  Identities=28%  Similarity=0.493  Sum_probs=51.0

Q ss_pred             eEEEEEEcc-CCCCeEEEeeCCccccCCCCcee---e----cceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         123 LNLSCVAVG-SPMPFVKWRKGQNIELTPDDKLP---V----GRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       123 ~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~~~~---~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      +.|.|.+.| .|.|.+.|+|+ +..+....+..   +    ....|.|.++  +|.|.|+|.|.|..|....++.
T Consensus         1 ~~l~C~~~g~~P~p~~~W~k~-g~~l~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~   74 (75)
T cd05750           1 LVLKCEATSEYPSLRFKWFKD-GKELNRKNKPRNIKIRNKKKNSELQINKAKLADSGEYTCVVENILGNDTVTAN   74 (75)
T ss_pred             CEEEEEccCCCCCceEEEEcC-CeeccccCCcceEEEEecCceEEEEEccCCcccCeEEEEEEEEcCCceeEEEe
Confidence            469999999 99999999999 66665443321   2    3468999998  6999999999999998776653

Ig_Pro_neuregulin: immunoglobulin (Ig)-like domain in neuregulins (NRGs). NRGs are signaling molecules, which participate in cell-cell interactions in the nervous system, breast, heart, and other organ systems, and are implicated in the pathology of diseases including schizophrenia, multiple sclerosis, and breast cancer. There are four members of the neuregulin gene family (NRG1, -2, -3, and -4). The NRG-1 protein, binds to and activates the tyrosine kinases receptors ErbB3 and ErbB4, initiating signaling cascades. The other NRGs proteins bind one or the other or both of these ErbBs. NRG-1 has multiple functions; for example, in the brain it regulates various processes such as radial glia formation and neuronal migration, dendritic development, and expression of neurotransmitters receptors; in the peripheral nervous system NRG-1 regulates processes such as target cell differentiation, and Schwann cell surv

>cd05898 Ig5_KIRREL3 Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)

Probab=98.88  E-value=2.3e-08  Score=81.74  Aligned_cols=82  Identities=18%  Similarity=0.333  Sum_probs=62.9

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCC--CCceee--------cceEEEEeee--cC-Ce
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTP--DDKLPV--------GRNVLTLDRV--TE-SE  169 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~--~~~~~~--------~~~~l~i~~l--~d-~g  169 (904)
                      ||.|.. ... ..+.+|+.++|.|.+.+.|.| .|.|..+ +..+..  ..|+.+        ....|.|.++  +| .|
T Consensus         2 pP~i~~-~~s-~~~~~G~~~~L~C~~~s~P~P~~i~W~w~-~~~i~~~~~~r~~I~~~~~~~g~~S~L~I~~~~~~d~~g   78 (98)
T cd05898           2 PPIISS-EQV-QYAVRGERGKVKCFIGSTPPPDRIAWAWK-ENVLESGTSERYTVERTSTGSGVLSTLTINNIMEADFQT   78 (98)
T ss_pred             CCEEec-Cce-EEEeCCCcEEEEEEEccCCCCcEEEEEEc-cccccCCCCCCEEEEEEccCCCcEEEEEECCCccccCCc
Confidence            677743 333 899999999999999999987 5788887 445543  356654        2347999999  35 79


Q ss_pred             EEEEEEEecCcceEEEEEE
Q psy8771         170 NYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       170 ~Y~c~a~n~~g~~~~~~~l  188 (904)
                      .|.|.|.|.+|.....+.|
T Consensus        79 ~Y~C~a~N~~G~d~~~i~L   97 (98)
T cd05898          79 HYNCTAWNSFGSGTAIIQL   97 (98)
T ss_pred             EEEEEEEeCCccceEEEEe
Confidence            9999999999998877665

Ig5_KIRREL3: the fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2). This protein has five Ig-like domains, one transmembrane domain, and a cytoplasmic tail. Included in this group is mammalian Kirrel (Neph1). These proteins contain multiple Ig domains, have properties of cell adhesion molecules, and are important in organ development. Neph1 and 2 may mediate axonal guidance and synapse formation in certain areas of the CNS. In the kidney, they participate in the formation of the slit diaphragm.

>cd07701 Ig1_Necl-3 First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3, also known as cell adhesion molecule 2 (CADM2))

Probab=98.87  E-value=1.4e-08  Score=83.76  Aligned_cols=77  Identities=16%  Similarity=0.329  Sum_probs=58.4

Q ss_pred             CCceEEecCCCeEEEEEEccCCCCeEEEeeCCcc-------ccCCCCceee-----cceEEEEeee--cCCeEEEEEEEe
Q psy8771         112 PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI-------ELTPDDKLPV-----GRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       112 ~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~-------~~~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      ++ +.+.+|++++|+|.+.|.|.+.|.|++.++.       ....+.|+..     ...+|.|.++  +|+|.|.|.+.+
T Consensus         5 ~~-v~v~eG~~v~L~C~~~~~p~~~v~W~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~t   83 (95)
T cd07701           5 QN-VTVVEGGTANLTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISISDVSLSDEGQYTCSLFT   83 (95)
T ss_pred             ce-EEEecCCcEEEEEEEecCCceEEEEeCCCCeEEEEcCcccccCCCEEEEECCCCcEEEEECcCCcccCEEEEEEeEe
Confidence            45 9999999999999999999999999874221       1122345543     3468999999  799999999998


Q ss_pred             cCcceEEEEEEEE
Q psy8771         178 VLGVIETSTIVKV  190 (904)
Q Consensus       178 ~~g~~~~~~~l~v  190 (904)
                      . ....+.+.|.|
T Consensus        84 ~-~~~~~~~~l~v   95 (95)
T cd07701          84 M-PVKTSKAYLTV   95 (95)
T ss_pred             e-cCccEEEEEEC
Confidence            4 44477777764

Ig1_Necl-3: domain similar to the N-terminal immunoglobulin (Ig)-like domain of nectin-like molecule-3, Necl-3 (also known as cell adhesion molecule 2 (CADM2), SynCAM2, IGSF4D). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). They all have an extracellular region containing three Ig-like domains, a transmembrane region, and a cytoplasmic region. The N-terminal Ig-like domain of the extracellular region, belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-3 accumulates in central and peripheral nervous system tissue, and has been shown to selectively interact with oligodendrocytes.

>cd05845 Ig2_L1-CAM_like Second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins

Probab=98.86  E-value=1.1e-08  Score=82.43  Aligned_cols=76  Identities=18%  Similarity=0.287  Sum_probs=61.1

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEE-EccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCe-EEEEEEEecC
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCV-AVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESE-NYTCIAASVL  179 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~-~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g-~Y~c~a~n~~  179 (904)
                      |+|.......+.+.+|+.+.|.|. ..|.|.|.|.|.+++...+..+.|+.+ .+|.|.|.++  +|+| .|.|.|.|..
T Consensus         3 ~~~~~~~~~~v~V~eG~~~~L~C~pP~g~P~P~i~W~~~~~~~i~~~~Ri~~~~~GnL~fs~v~~~D~g~~Y~C~a~~~~   82 (95)
T cd05845           3 PKWPKEKIRPVEVEEGDSVVLPCNPPKSAVPLRIYWMNSDLLHITQDERVSMGQNGNLYFANVEEQDSHPDYICHAHFPG   82 (95)
T ss_pred             CcCCccccceeEEecCCCEEEEecCCCCCCCCEEEEECCCCccccccccEEECCCceEEEEEEehhhCCCCeEEEEEccc
Confidence            344444333499999999999997 799999999999985555666777776 5799999999  6998 7999999876


Q ss_pred             c
Q psy8771         180 G  180 (904)
Q Consensus       180 g  180 (904)
                      .
T Consensus        83 ~   83 (95)
T cd05845          83 L   83 (95)
T ss_pred             c
Confidence            4

Ig2_L1-CAM_like: domain similar to the second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains, five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth.

>cd05742 Ig1_VEGFR_like First immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor (R) and similar proteins

Probab=98.85  E-value=1.5e-08  Score=82.07  Aligned_cols=70  Identities=21%  Similarity=0.243  Sum_probs=54.6

Q ss_pred             CCCeEEEEEEccC--CCCeEEEeeCCccccCCCC----c-e----eecceEEEEeee--cCCeEEEEEEEecCcceEEEE
Q psy8771         120 DSPLNLSCVAVGS--PMPFVKWRKGQNIELTPDD----K-L----PVGRNVLTLDRV--TESENYTCIAASVLGVIETST  186 (904)
Q Consensus       120 g~~~~l~C~~~g~--p~p~i~W~k~~~~~~~~~~----~-~----~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~  186 (904)
                      |+.+.|.|.+.|.  |.|.|.|.++ +..+....    + .    ......|.|.++  +|+|.|+|.|.|..|..++++
T Consensus         1 Ge~~~L~C~~~g~~~~~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~v~~~DsG~Y~C~a~n~~~~~~~s~   79 (84)
T cd05742           1 GETLVLNCTVLTELNEGVDFQWTYP-GKKRGRGKSMVTRQSLSEATELSSTLTIPNATLKDSGTYTCAASSGTMDQKEST   79 (84)
T ss_pred             CCeEEEEEEEEeCCCccEEEEEecC-CcccCCceEeecccccccceEEEEEEEECCCChhhCEEEEEEEccCCCceEEEE
Confidence            7899999999999  8899999987 43322111    1 1    113458999998  699999999999999998888


Q ss_pred             EEEE
Q psy8771         187 IVKV  190 (904)
Q Consensus       187 ~l~v  190 (904)
                      .|.|
T Consensus        80 ~v~v   83 (84)
T cd05742          80 KVNI   83 (84)
T ss_pred             EEEE
Confidence            8776

Ig1_VEGFR_like: first immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor(R) related proteins. The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGF-A interacts with both VEGFR-1 and VEGFR-2. VEGFR-1 binds strongest to VEGF, VEGF-2 binds more weakly. VEGFR-3 appears not to bind VEGF, but binds other members of the VEGF family (VEGF-C and -D). VEGFRs bind VEGFs with high affinity with the IG-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGF

>cd04979 Ig_Semaphorin_C Immunoglobulin (Ig)-like domain of semaphorin

Probab=98.83  E-value=2.2e-08  Score=82.08  Aligned_cols=75  Identities=19%  Similarity=0.249  Sum_probs=58.9

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC----CceeecceEEEEeee--cCCeEEEEEEEecC-cceEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD----DKLPVGRNVLTLDRV--TESENYTCIAASVL-GVIETSTI  187 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~----~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~-g~~~~~~~  187 (904)
                      +.+.+|+++.|+|.+.+ |.+.+.|+|+ +..+...    .++....+.|.|.++  +|+|.|.|.|.+.. +...++..
T Consensus         6 ~~v~~g~~v~L~C~~~~-p~~~i~W~k~-~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~~   83 (89)
T cd04979           6 VTVVEGNSVFLECSPKS-NLASVVWLFQ-GGPLQRKEEPEERLLVTEDGLLIRSVSPADAGVYTCQSVEHGFKQTLATYS   83 (89)
T ss_pred             EEEECCCcEEEEEeCCC-CCceEEEEEC-CcccccccCcCceEEEcCCCEEEccCCHHHCEEEEEEEecCccceeEeEEE
Confidence            88899999999999988 8889999999 5444332    456566667999998  69999999998754 44566666


Q ss_pred             EEEE
Q psy8771         188 VKVQ  191 (904)
Q Consensus       188 l~v~  191 (904)
                      |.|.
T Consensus        84 l~V~   87 (89)
T cd04979          84 LNVL   87 (89)
T ss_pred             EEEe
Confidence            6665

Ig_Semaphorin_C; Immunoglobulin (Ig)-like domain in semaphorins. Semaphorins are transmembrane protein that have important roles in a variety of tissues. Functionally, semaphorins were initially characterized for their importance in the development of the nervous system and in axonal guidance. Later they have been found to be important for the formation and functioning of the cardiovascular, endocrine, gastrointestinal, hepatic, immune, musculoskeletal, renal, reproductive, and respiratory systems. Semaphorins function through binding to their receptors and transmembrane semaphorins also serves as receptors themselves. Although molecular mechanism of semaphorins is poorly understood, the Ig-like domains may involve in ligand binding or dimerization.

>cd05757 Ig2_IL1R_like Second immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R) and similar proteins

Probab=98.83  E-value=2.2e-08  Score=81.58  Aligned_cols=76  Identities=20%  Similarity=0.257  Sum_probs=61.8

Q ss_pred             eEEecCCCeEEEEEEccC-----CCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGS-----PMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~-----p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      ..+.+|+++.|.|...+.     |.|.|.|+|+ +..+....+....++.|.|.++  +|+|.|+|.|.|..|.......
T Consensus         5 ~~~~~g~~~~l~Cp~~~~~~~~~~~p~i~Wyk~-~~~i~~~~~~~~~~~~L~I~~v~~~DsG~YtC~~~n~~~~~~~~~t   83 (92)
T cd05757           5 QILFSTKGGKIVCPDLDDFKNENTLPPVQWYKD-CKLLEGDRKRFVKGSKLLIQNVTEEDAGNYTCKLTFTHNGKQYNVT   83 (92)
T ss_pred             EEEeeccCCEEECCChHHccCCCCCCcEEEeEC-CEECCCCccEEecCCEEEEeeCChhhCEEEEEEEEecCCCEEEEEE
Confidence            778899999999988753     5789999999 7777655444447889999999  6999999999999988776665


Q ss_pred             EEEE
Q psy8771         188 VKVQ  191 (904)
Q Consensus       188 l~v~  191 (904)
                      +.+.
T Consensus        84 ~t~~   87 (92)
T cd05757          84 RTIS   87 (92)
T ss_pred             EEEE
Confidence            5554

Ig2_IL1R_like: domain similar to the second immunoglobulin (Ig)-like domain of interleukin-1 receptor (IL1R). IL-1 alpha and IL-1 beta are cytokines which participate in the regulation of inflammation, immune responses, and hematopoiesis. These cytokines bind to the IL-1 receptor type 1 (IL1R1), which is activated on additional association with an accessory protein, IL1RAP. IL-1 also binds a second receptor designated type II (IL1R2). Mature IL1R1 consists of three IG-like domains, a transmembrane domain, and a large cytoplasmic domain. Mature IL1R2 is organized similarly except that it has a short cytoplasmic domain. The latter does not initiate signal transduction. A naturally occurring cytokine IL-1RA (IL-1 receptor antagonist) is widely expressed and binds to IL-1 receptors, inhibiting the binding of IL-1 alpha and IL-1 beta. This group also contains ILIR-like 1 (IL1

>cd05729 Ig2_FGFR_like Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor and similar proteins

Probab=98.81  E-value=3.7e-08  Score=80.43  Aligned_cols=75  Identities=29%  Similarity=0.515  Sum_probs=59.9

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----cceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----GRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      +.+..|+.+.|.|.+.|.|.+.|.|+|+ +..+....+...     ....|.|.++  +|.|.|.|.+.|..|..+.+..
T Consensus         4 ~~~~~G~~~~l~C~~~~~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~~~n~~g~~~~~~~   82 (85)
T cd05729           4 HAVPAGSTVRLKCPASGNPRPTITWLKD-GKPFKKEHRIGGYKVRKKKWTLILESVVPSDSGKYTCIVENKYGSINHTYK   82 (85)
T ss_pred             eEecCCCcEEEEEEcCCCCCCeEEEEEC-CEECcccCceeEEEccCcEEEEEEeECCcccCEEEEEEEEECCceEEEEEE
Confidence            5677899999999999999999999999 655544333221     2347899998  6999999999999999877776


Q ss_pred             EEE
Q psy8771         188 VKV  190 (904)
Q Consensus       188 l~v  190 (904)
                      |.|
T Consensus        83 l~v   85 (85)
T cd05729          83 VDV   85 (85)
T ss_pred             EeC
Confidence            653

Ig2_FGFR_like: domain similar to the second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor. FGF receptors bind FGF signaling polypeptides. FGFs participate in multiple processes such as morphogenesis, development, and angiogenesis. FGFs bind to four FGF receptor tyrosine kinases (FGFR1, -2, -3, -4). Receptor diversity is controlled by alternative splicing producing splice variants with different ligand binding characteristics and different expression patterns. FGFRs have an extracellular region comprised of three Ig-like domains, a single transmembrane helix, and an intracellular tyrosine kinase domain. Ligand binding and specificity reside in the Ig-like domains 2 and 3, and the linker region that connects these two. FGFR activation and signaling depend on FGF-induced dimerization, a process involving cell surface heparin or heparin

>cd05871 Ig_Semaphorin_classIII Immunoglobulin (Ig)-like domain of class III semaphorin

Probab=98.80  E-value=4.3e-08  Score=79.93  Aligned_cols=76  Identities=20%  Similarity=0.304  Sum_probs=59.7

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc----cCCCCceeecceEEEEeee--cCCeEEEEEEE-ecCcceEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE----LTPDDKLPVGRNVLTLDRV--TESENYTCIAA-SVLGVIETST  186 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~----~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~-n~~g~~~~~~  186 (904)
                      +.+.+|+.+.|+|.. +.|.|.|.|+|.+ +..    +....++...+++|.|.++  +|+|.|+|.|. |..+.....+
T Consensus         6 ~~~~eG~~v~L~C~~-~~p~p~v~Wykq~~g~~~~~~~~~~~r~~~~~~~L~I~~~~~~DsG~Y~C~a~~~~~~~~~~~~   84 (91)
T cd05871           6 VYGVENNSTFLECLP-KSPQASVKWLFQRGGDQRKEEVKTEERLIHTERGLLLRSLQRSDAGVYTCTAVEHSFSQTLAKY   84 (91)
T ss_pred             EEEecCCcEEEEEEC-CCCCceEEEEEECCCCCccccccccccEEEecCeEEEeeCChhHCEEEEEEEEccCCeEEEEEE
Confidence            778999999999996 6899999999842 211    2234566667788999999  69999999997 5767677788


Q ss_pred             EEEEE
Q psy8771         187 IVKVQ  191 (904)
Q Consensus       187 ~l~v~  191 (904)
                      +|.|.
T Consensus        85 ~l~v~   89 (91)
T cd05871          85 TLHVI   89 (91)
T ss_pred             EEEEe
Confidence            88775

Ig_Semaphorin_class III; Immunoglobulin (Ig)-like domain of class III semaphorins. Semaphorins are classified into various classes on the basis of structural features additional to the Sema domain. Class III semaphorins are a vertebrate class having a Sema domain, an Ig domain, a short basic domain, and are secreted. They have been shown to be axonal guidance cues and have a part in the regulation of the cardiovascular, immune and respiratory systems. Sema3A, the prototype member of this class III subfamily, induces growth cone collapse and is an inhibitor of axonal sprouting. In perinatal rat cortex as a chemoattractant, it functions to direct, for pyramidal neurons, the orientated extension of apical dendrites. It may play a role, prior to the development of apical dendrites, in signaling the radial migration of newborn cortical neurons towards the upper layers. Sema3A selectively inhibits vascula

>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi

Probab=98.76  E-value=6.6e-06  Score=80.96  Aligned_cols=134  Identities=19%  Similarity=0.259  Sum_probs=85.5

Q ss_pred             cccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCee-EEecCC---CCCCCCCCcEEEecC----CCEEEEEecCCCCC
Q psy8771         672 GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIP-VRTKQY---VPGAPPQNVSCEPLS----STSIRISWEPPPVE  743 (904)
Q Consensus       672 ~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~-~~t~~~---~p~~~P~~l~~~~~~----~~~v~l~W~~~~~~  743 (904)
                      ..-..+.+.|+.||..|.+++.+.+... +....-+. .+|.+.   .|. .|.++.+...+    -++++|.|.+.+. 
T Consensus       125 ~~~~~f~l~~~~~g~~Yliri~~~~~~e-~~~~~kV~aast~~~~~~~P~-LP~d~~Ik~f~~lrtC~SvTIAW~~s~d-  201 (300)
T PF10179_consen  125 EGLRHFRLSGVKPGERYLIRIQISNSDE-GPSTFKVQAASTNPSKQPYPQ-LPDDTSIKEFNKLRTCNSVTIAWLGSPD-  201 (300)
T ss_pred             cceEEEEECCCCCCCeEEEEEEccCCCC-CceEEEEEEecCCcccCCCCC-CCCCCceeEEcCCcccceEEEEEecCCC-
Confidence            3446889999999999999998877532 22222233 333332   222 46777775544    3899999998742 


Q ss_pred             CCCccEEEEEEEEEEccCC----------------CC---c--cEEE--E-------ec-CcceEEecCCCCCceEEEEE
Q psy8771         744 RSNGHIVYYKLQFVETGRS----------------DS---E--ASIV--T-------LK-NQTSFVLDELKKWTEYRIWV  792 (904)
Q Consensus       744 ~~~g~~~~Y~v~~~~~~~~----------------~~---~--~~~~--~-------~~-~~~~~~i~~L~p~t~Y~~~V  792 (904)
                       .  . ..|.|+.+.....                ..   .  ..+.  .       .. .....+|.||+||+.|.|.|
T Consensus       202 -~--~-~kYCvy~~~~~~~~~~~~~~~~~n~C~~~~sr~k~e~v~Ck~~~~~n~~~~~~~~v~tetI~~L~PG~~Yl~dV  277 (300)
T PF10179_consen  202 -R--S-IKYCVYRREEHSNYQERSVSRMPNQCLGPESRKKSEKVLCKYFHSPNSSEDPQRAVTTETIKGLKPGTTYLFDV  277 (300)
T ss_pred             -C--C-ceEEEEEEEecCchhhhhhcccCccCCCCCccccceEEEEEEEcCCccccccccccceeecccCCCCcEEEEEE
Confidence             1  1 4799988865432                00   0  0010  0       11 33456899999999999999


Q ss_pred             EEeeCCCCCCCCCcEEeecC
Q psy8771         793 LAGTSIGDGPSSYPITIRTH  812 (904)
Q Consensus       793 ~a~~~~g~g~~s~~~~~~t~  812 (904)
                      .+.-..|..-.=....++|.
T Consensus       278 ~~~~~~G~sl~Y~s~~VkTr  297 (300)
T PF10179_consen  278 YVNGPSGQSLPYRSKWVKTR  297 (300)
T ss_pred             EEecCCCceeecceEEEEec
Confidence            99877776655555556664

The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.

>cd05895 Ig_Pro_neuregulin-1 Immunoglobulin (Ig)-like domain found in neuregulin (NRG)-1

Probab=98.68  E-value=6.2e-08  Score=76.67  Aligned_cols=64  Identities=25%  Similarity=0.476  Sum_probs=49.1

Q ss_pred             eEEEEEEcc-CCCCeEEEeeCCccccCCC----Cceee----cceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         123 LNLSCVAVG-SPMPFVKWRKGQNIELTPD----DKLPV----GRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       123 ~~l~C~~~g-~p~p~i~W~k~~~~~~~~~----~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      +.|.|.+.+ .|.+.++|+|+ +..+...    .++..    ..++|.|.++  +|+|.|+|.|.|..|..+.++.
T Consensus         1 ~~L~C~a~~~~p~~~~~W~~~-g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~N~~g~~~~~~~   75 (76)
T cd05895           1 LVLRCETVSEYPSLRFKWFKN-GKEIGAKNKPDNKIKIRKKKKSSELQISKASLADNGEYKCMVSSKLGNDSVTAN   75 (76)
T ss_pred             CEEEEecccCCCCCceEEEEC-CcccccCCCCCceEEEEeCCcEEEEEECcCCcccCEEEEEEEEeCCCceeEEEe
Confidence            479999885 68899999998 6666432    22222    3468999998  6999999999999998777654

Ig_Pro_neuregulin-1: immunoglobulin (Ig)-like domain found in neuregulin (NRG)-1. There are many NRG-1 isoforms which arise from the alternative splicing of mRNA. NRG-1 belongs to the neuregulin gene family, which is comprised of four genes. This group represents NRG-1. NRGs are signaling molecules, which participate in cell-cell interactions in the nervous system, breast, and heart, and other organ systems, and are implicated in the pathology of diseases including schizophrenia, multiple sclerosis, and breast cancer. The NRG-1 protein binds to and activates the tyrosine kinases receptors ErbB3 and ErbB4, initiating signaling cascades. NRG-1 has multiple functions; for example, in the brain it regulates various processes such as radial glia formation and neuronal migration, dendritic development, and expression of neurotransmitters receptors; in the peripheral nervous system NRG-1 regulates process

>cd05717 Ig1_Necl-1-3_like First (N-terminal) immunoglobulin (Ig)-like domain of the nectin-like molecules Necl-1 - Necl-3 (also known as cell adhesion molecules CADM3, CADM1, and CADM2 respectively)

Probab=98.64  E-value=2.4e-07  Score=77.10  Aligned_cols=75  Identities=16%  Similarity=0.336  Sum_probs=56.1

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCcccc-------CCCCceee-----cceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIEL-------TPDDKLPV-----GRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~-------~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      +.+.+|++++|.|.+.+.+.+.+.|++.++..+       ....|+.+     ...+|.|.++  +|+|.|.|.+.+...
T Consensus         7 ~~v~~G~~v~L~C~~~~~~~~~v~W~~p~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~   86 (95)
T cd05717           7 VTVVEGGTATLKCRVKNNDNSSLQWSNPNQQTLYFNDKRALRDNRIQLVNFSANELSISISNVSLSDEGRYTCSLYTMPV   86 (95)
T ss_pred             EEEcCCCCEEEEEEECCCCCceEEEeCCCCcEEEeccccccccCcEEEEcCCCCeeEEEEccCCcccCEEEEEEEecCCC
Confidence            889999999999999999999999987423211       12245543     3457999999  699999999987653


Q ss_pred             ceEEEEEEEE
Q psy8771         181 VIETSTIVKV  190 (904)
Q Consensus       181 ~~~~~~~l~v  190 (904)
                       .++.+.|.|
T Consensus        87 -~~~~~~~~v   95 (95)
T cd05717          87 -QTAKATVTV   95 (95)
T ss_pred             -ceEEEEEEC
Confidence             466666654

Ig1_Necl-1-3_like: N-terminal immunoglobulin (Ig)-like domain of the nectin-like molecules Necl-1 (also known as cell adhesion molecule 3 (CADM3)), Necl-2 (CADM1), and Necl-3 (CADM2). At least five nectin-like molecules have been identified (Necl-1 - Necl-5). They all have an extracellular region containing three Ig-like domains, a transmembrane region, and a cytoplasmic region. The N-terminal Ig-like domain of the extracellular region belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-1, Necl-2, and Necl-3 have Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-1 is specifically expressed in neural tissue, and is important to the form

>cd05861 Ig1_PDGFR-alphabeta Frst immunoglobulin (Ig)-like domain of platelet-derived growth factor (PDGF) receptors (R), alpha (CD140a), and beta (CD140b)

Probab=98.63  E-value=2.9e-07  Score=74.08  Aligned_cols=72  Identities=17%  Similarity=0.296  Sum_probs=52.1

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccc---cCCCCceee----cceEEEEeee--cCCeEEEEEEEecCc--ceEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIE---LTPDDKLPV----GRNVLTLDRV--TESENYTCIAASVLG--VIETSTIV  188 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~---~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g--~~~~~~~l  188 (904)
                      |++++|.|.+.|.|.+.+.|.++++..   +....+...    ....|.|.++  +|+|.|.|.|.|..+  ..+.+..|
T Consensus         1 Ge~~~l~C~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~DsG~Y~C~a~n~~~~~~~~~sv~i   80 (84)
T cd05861           1 GETITVNCIVQGNEVVDFSWTYPGKDIGKGIPEVEEVKVPATTLRSTLTFPHATVEDSGTYECAAHESTQDQKAFKKVNI   80 (84)
T ss_pred             CCcEEEEEEEECCCccEEEEEECCccCCCCceEEEEEecCCcEEEEEEEECCCCcCCCEEEEEEEEECccCcceeEEEEE
Confidence            789999999999999999999873321   111111211    2457999998  799999999999876  45566666


Q ss_pred             EEE
Q psy8771         189 KVQ  191 (904)
Q Consensus       189 ~v~  191 (904)
                      .|.
T Consensus        81 ~V~   83 (84)
T cd05861          81 TVH   83 (84)
T ss_pred             EEe
Confidence            654

Ig1_PDGFR-alphabeta: The first immunoglobulin (Ig)-like domain of platelet-derived growth factor (PDGF) receptors (R), alpha (CD140a), and beta (CD140b). PDGF is a potent mitogen for connective tissue cells. PDGF-stimulated processes are mediated by three different PDGFs (PDGF-A,-B, and C). PDGFRalpha binds to all three PDGFs, whereas the PDGFRbeta binds only to PDGF-B. PDGFRs alpha and beta have similar organization: an extracellular component with five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. In mice, PDGFRalpha and PDGFRbeta are essential for normal development.

>cd05727 Ig2_Contactin-2-like Second Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins

Probab=98.62  E-value=1.5e-07  Score=76.12  Aligned_cols=69  Identities=17%  Similarity=0.248  Sum_probs=53.9

Q ss_pred             CCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCcccc--CCCCc-eee-cceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         112 PALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIEL--TPDDK-LPV-GRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       112 ~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~--~~~~~-~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      .+...+.+|+.+.|.|... |.|.+.+.|+|+ +..+  ..+.| +.. .+|.|.|.++  +|.|.|+|.|.|....
T Consensus        10 ~~~~~v~eG~~~~L~C~pP~g~P~p~~~W~k~-~~~~~~~~d~r~~~~~~~G~L~fs~v~~~D~g~Y~C~A~n~~~~   85 (96)
T cd05727          10 RDEVKVKEGWGVVLFCDPPPHYPDLSYRWLLN-EFPNFIPEDGRRFVSQTNGNLYIAKVEASDRGNYSCFVSSPSST   85 (96)
T ss_pred             cCceeeeeCCcEEEeeCCCCCCCCCEEEEEEC-CcccccccCCCeEEeCCCCcEEEeecCHhhCceeEEEEEecccC
Confidence            3448889999999999655 889999999999 5433  22333 333 4799999999  6999999999997754

Ig2_Contactin-2-like: second Ig domain of the neural cell adhesion molecule contactin-2. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (aliases TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. The first four Ig domains form the intermolecular binding fragment which arranges as a compact U-shaped module by contacts between Ig domains 1 and 4, and domains 2 and 3. It has been proposed that a linear zipper-like array forms, from contactin-2 molecules alternatively provided by the two apposed membranes.

>KOG4802|consensus

Probab=98.59  E-value=6.5e-07  Score=88.32  Aligned_cols=125  Identities=20%  Similarity=0.319  Sum_probs=88.1

Q ss_pred             cceEEEeCCCCCcEEEEEEEEEcCCCC---CCCCCCeeEEecCCCCCCCCCCcEEEecC---CCEEEEEecCCCCCCCCc
Q psy8771         674 VETYSLTGLYPNTLYYIWLAAQSPRGE---GATTPPIPVRTKQYVPGAPPQNVSCEPLS---STSIRISWEPPPVERSNG  747 (904)
Q Consensus       674 ~~~~~l~~L~p~t~Y~v~V~a~~~~G~---~~~s~~~~~~t~~~~p~~~P~~l~~~~~~---~~~v~l~W~~~~~~~~~g  747 (904)
                      .+.+.+.++.||.-|+|+|.|+|..|.   +.+|......-.+.+|+ +|.+++...+.   .-...|.|.+++   .+=
T Consensus       208 e~~~~~t~~rPgRwyefrvaavn~~G~rGFs~PSkpf~ssk~pkaPp-~P~dl~l~~v~~dG~~~~~v~w~P~~---sdl  283 (516)
T KOG4802|consen  208 ENTYIFTDMRPGRWYEFRVAAVNAYGFRGFSEPSKPFPSSKNPKAPP-SPNDLKLIGVQFDGRYMLKVVWCPSK---SDL  283 (516)
T ss_pred             CceeeeeecCcceeEEEEEeeeecccccccCCCCCCCCCCCCCCCCc-CcccceeeeeeecceEEEEEEeCCCC---CCC
Confidence            348889999999999999999998765   45565555544444444 67888875443   234668888875   456


Q ss_pred             cEEEEEEEEEEccCCCCcc--EEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCC
Q psy8771         748 HIVYYKLQFVETGRSDSEA--SIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGP  802 (904)
Q Consensus       748 ~~~~Y~v~~~~~~~~~~~~--~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~  802 (904)
                      ++..|.|.|..........  ...... +...+.|.+|.|+..|.|.|.|....|.+.
T Consensus       284 Pv~~Yki~Ws~~v~s~k~~m~tks~~~k~thq~si~~L~Pns~Y~VevqAi~y~g~~r  341 (516)
T KOG4802|consen  284 PVEKYKITWSLYVNSAKASMITKSSYVKDTHQFSIKELLPNSSYYVEVQAISYLGSRR  341 (516)
T ss_pred             cceeeEEEeehhhhhhhhhcccccceeeccchhhhhhcCCCCeEEEEEEEEEeccCcc
Confidence            7999999998754221111  111111 445566999999999999999999888764

>smart00408 IGc2 Immunoglobulin C-2 Type

Probab=98.58  E-value=2.3e-07  Score=70.51  Aligned_cols=61  Identities=31%  Similarity=0.641  Sum_probs=49.9

Q ss_pred             cCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         119 LDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      +|+.+.|.|.+.+.|.+.+.|+++ +..+....+.......|.|.++  +|+|.|+|.+.|..|
T Consensus         1 ~g~~~~l~C~~~~~~~~~v~W~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g   63 (63)
T smart00408        1 EGQSVTLTCPAEGDPVPNITWLKD-GKPLPESNRLSASGSTLTIKSVSLEDSGEYTCVAENSAG   63 (63)
T ss_pred             CCceEEEEeeCccCCCCeEEEEEC-CEECCCCCEEecCCcEEEEeeCCcccCEEEEEEEecCCC
Confidence            478999999999999999999998 6555533334446778999999  699999999998765

>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi

Probab=98.56  E-value=7.1e-05  Score=73.84  Aligned_cols=258  Identities=19%  Similarity=0.234  Sum_probs=128.0

Q ss_pred             cCCCCceeeeeccCCeEEEEEEEEeeCC-CCCCCCCCceeeecCCCCCCCCCCe-----EEEecC-Cc-eEEEEecCCC-
Q psy8771         436 YGKTPGFGEQALYPNTLYYIWLAAQSPR-GEGATTPPIPVRTKQYEPGTAPRDV-----QVRPLS-SS-TMVIQWDEPE-  506 (904)
Q Consensus       436 ~~~~~~~~~~~L~p~~~Y~~~v~a~~~~-g~~~~s~~~~~~t~~~~p~~~p~~l-----~v~~~~-~~-~~~l~W~~p~-  506 (904)
                      .|..+.+++.+|.|++.|.|.|.+.|.. +.+..-......+.+... ..|..|     ...... .. .-.++...|. 
T Consensus        11 vg~~t~~t~~~L~p~t~YyfdVF~vn~~~n~ssay~gt~~~t~~~~r-~~~~~Lkdg~l~~~~l~~~~g~~~f~f~vP~~   89 (300)
T PF10179_consen   11 VGQKTNQTLSGLKPDTTYYFDVFVVNQLTNNSSAYLGTFARTREENR-SKPTRLKDGKLTQVKLKGKGGFKFFSFKVPKR   89 (300)
T ss_pred             cCCCceEEeccCCCCCeEEEEEEEEECCCCceeeeeEEEEEEccccC-CCcEEcccCcEEEEEECCcCceeEEEEcCCcC
Confidence            3566778999999999999999999974 443322223333421111 222222     111111 11 2344555441 


Q ss_pred             -CCCCceee--------EEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEE-EecC
Q psy8771         507 -TPNGQITG--------YKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVL-VKTQ  576 (904)
Q Consensus       507 -~~~~~i~~--------Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~-~~t~  576 (904)
                       ..+..+..        -+|+....+.   .........+-..+.+.++.||..|.+++.+.+... +.....+. ..+.
T Consensus        90 ~~~~~~~~l~v~~C~G~V~v~i~r~gk---~l~~~~~v~~~~~f~l~~~~~g~~Yliri~~~~~~e-~~~~~kV~aast~  165 (300)
T PF10179_consen   90 SSTHQSLWLFVQSCSGSVRVEISRNGK---ILLSQKNVEGLRHFRLSGVKPGERYLIRIQISNSDE-GPSTFKVQAASTN  165 (300)
T ss_pred             CCCCccEEEEEEeCCCeEEEEEEECCe---EEeeeecccceEEEEECCCCCCCeEEEEEEccCCCC-CceEEEEEEecCC
Confidence             11111111        1222222220   011111234556789999999999999998877543 22222222 2222


Q ss_pred             C---CCCCCCCCceEEec----CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCC-C
Q psy8771         577 Q---GVPSQPRDLRAVDI----QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHS-G  648 (904)
Q Consensus       577 ~---~~p~~p~~~~~~~~----~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~-~  648 (904)
                      .   ..|.-|.++.+...    +-++++|.|.+..+.  . ..|.|+.++...-=        ....+.-.++...+. .
T Consensus       166 ~~~~~~P~LP~d~~Ik~f~~lrtC~SvTIAW~~s~d~--~-~kYCvy~~~~~~~~--------~~~~~~~~~n~C~~~~s  234 (300)
T PF10179_consen  166 PSKQPYPQLPDDTSIKEFNKLRTCNSVTIAWLGSPDR--S-IKYCVYRREEHSNY--------QERSVSRMPNQCLGPES  234 (300)
T ss_pred             cccCCCCCCCCCCceeEEcCCcccceEEEEEecCCCC--C-ceEEEEEEEecCch--------hhhhhcccCccCCCCCc
Confidence            2   24566788777554    347999999987542  2 57877765421100        000001111111100 0


Q ss_pred             CceeeEEEE-EEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEe
Q psy8771         649 ENIISYELY-WNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT  711 (904)
Q Consensus       649 ~~~~~y~v~-~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t  711 (904)
                      .......+. |...  .+............+|.||+||+.|.|.|.+.-..|.+-+=....+.|
T Consensus       235 r~k~e~v~Ck~~~~--~n~~~~~~~~v~tetI~~L~PG~~Yl~dV~~~~~~G~sl~Y~s~~VkT  296 (300)
T PF10179_consen  235 RKKSEKVLCKYFHS--PNSSEDPQRAVTTETIKGLKPGTTYLFDVYVNGPSGQSLPYRSKWVKT  296 (300)
T ss_pred             cccceEEEEEEEcC--CccccccccccceeecccCCCCcEEEEEEEEecCCCceeecceEEEEe
Confidence            011111111 1111  000001112234668999999999999999998777654333444444

The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.

>KOG4802|consensus

Probab=98.56  E-value=1.9e-06  Score=85.09  Aligned_cols=178  Identities=20%  Similarity=0.316  Sum_probs=110.1

Q ss_pred             CCCCe-EEEecCCceEEEEecCCCCCCCceeeEE--EEEEe---CCCCCCcceEEEeecCce-EEEEcCCCCCCeEEEEE
Q psy8771         484 APRDV-QVRPLSSSTMVIQWDEPETPNGQITGYK--VYYTQ---DQSLPMSAWETQVVDNNQ-LTTISDLTPHTIYTIRV  556 (904)
Q Consensus       484 ~p~~l-~v~~~~~~~~~l~W~~p~~~~~~i~~Y~--v~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~L~p~t~Y~~~V  556 (904)
                      +|++. .......+++.+.|..-....-.-..+.  ..|.-   .++.....|+.+...... .+.+.++.||.-|+|+|
T Consensus       147 ~Pr~k~~y~r~~~g~~av~w~~~~~~~v~~~~~~vr~~w~~g~hase~~~thwQtv~~t~~e~~~~~t~~rPgRwyefrv  226 (516)
T KOG4802|consen  147 PPRPKILYFRRSRGSHAVDWKIESSLLVYYVHVEVRSHWGRGFHASELGPTHWQTVEKTMEENTYIFTDMRPGRWYEFRV  226 (516)
T ss_pred             CCcchhhhhhhccCceeeeeeeccccceeeeehhhhhhhcccccccccccccceeeeecCCCceeeeeecCcceeEEEEE
Confidence            44433 3345566789999987332110011111  11111   122334668877775444 78899999999999999


Q ss_pred             EEEeCCCCCC---CCCcEEEecCCCCCCCCCCceEEecCCC---eEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEE
Q psy8771         557 QAFTSVGPGP---LSAPVLVKTQQGVPSQPRDLRAVDIQET---AVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAV  630 (904)
Q Consensus       557 ~a~~~~g~~~---~S~~~~~~t~~~~p~~p~~~~~~~~~~~---~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~  630 (904)
                      .|+|..|.-.   +|.+....-.+.+|++|.++++..+..+   ...|.|.++.                          
T Consensus       227 aavn~~G~rGFs~PSkpf~ssk~pkaPp~P~dl~l~~v~~dG~~~~~v~w~P~~--------------------------  280 (516)
T KOG4802|consen  227 AAVNAYGFRGFSEPSKPFPSSKNPKAPPSPNDLKLIGVQFDGRYMLKVVWCPSK--------------------------  280 (516)
T ss_pred             eeeecccccccCCCCCCCCCCCCCCCCcCcccceeeeeeecceEEEEEEeCCCC--------------------------
Confidence            9999987543   4444444455566778888877665322   3566777664                          


Q ss_pred             eeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc-----ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCC
Q psy8771         631 DIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK-----HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGAT  703 (904)
Q Consensus       631 ~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~-----~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~  703 (904)
                                      .+-++..|.|.|.-.-....     ..........+.|.+|.|+..|.|.|.|....|.+..
T Consensus       281 ----------------sdlPv~~Yki~Ws~~v~s~k~~m~tks~~~k~thq~si~~L~Pns~Y~VevqAi~y~g~~rL  342 (516)
T KOG4802|consen  281 ----------------SDLPVEKYKITWSLYVNSAKASMITKSSYVKDTHQFSIKELLPNSSYYVEVQAISYLGSRRL  342 (516)
T ss_pred             ----------------CCCcceeeEEEeehhhhhhhhhcccccceeeccchhhhhhcCCCCeEEEEEEEEEeccCccc
Confidence                            45567788887765532111     0111111224449999999999999999999887653

>cd07690 Ig1_CD4 First immunoglobulin (Ig) domain of CD4

Probab=98.55  E-value=2.6e-07  Score=75.15  Aligned_cols=69  Identities=17%  Similarity=0.331  Sum_probs=51.6

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-------------CCCceee-------cceEEEEeee--cCCeEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-------------PDDKLPV-------GRNVLTLDRV--TESENYT  172 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-------------~~~~~~~-------~~~~l~i~~l--~d~g~Y~  172 (904)
                      +.+.+|+.++|.|.+.+.+.+.|.|++++.....             ...|+..       ++.+|+|.+|  +|+|.|.
T Consensus         2 v~~~~G~~VtL~C~~s~~~~~~i~W~~~~~k~~~g~~~~l~~~~~~~~~~r~~~~~~~~~~g~~~L~I~~l~~sDsgtY~   81 (94)
T cd07690           2 VLGKKGDTAELPCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRNLWDQGSFPLIIKNLKIEDSDTYI   81 (94)
T ss_pred             eEeeCCCCEEEEEEeCCCCCcEEEEEECCcEEccCcCCEEEEecccccCCCCceecccCCCCeEEEEECCCCHHHCEEEE
Confidence            5678999999999999999999999966222111             1122221       2346999999  6999999


Q ss_pred             EEEEecCcceE
Q psy8771         173 CIAASVLGVIE  183 (904)
Q Consensus       173 c~a~n~~g~~~  183 (904)
                      |.+.|..++.+
T Consensus        82 C~v~~~~~~~~   92 (94)
T cd07690          82 CEVEDKKEEVE   92 (94)
T ss_pred             EEECCccceEE
Confidence            99999887654

Ig1_CD4; first immunoglobulin (Ig) domain of CD4. CD4 and CD8 are the two primary co-receptor proteins found on the surface of T cells, and the presence of either CD4 or CD8 determines the function of the T cell. CD4 is found on helper T cells, where it is required for the binding of MHC (major histocompatibility complex) class II molecules, while CD8 is found on cytotoxic T cells, where it is required for the binding of MHC class I molecules. CD4 contains four immunoglobulin domains, with the first three included in this hierarchy. The fourth domain has a general Ig architecture, but has slight topological changes in the arrangement of beta strands relative to the other structures in this family and is not specifically included in the hierarchy.

>cd05753 Ig2_FcgammaR_like Second immunoglobulin (Ig)-like domain of Fcgamma-receptors (FcgammaRs) and similar proteins

Probab=98.48  E-value=5.2e-07  Score=72.29  Aligned_cols=63  Identities=17%  Similarity=0.212  Sum_probs=50.5

Q ss_pred             eEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcce
Q psy8771         115 LEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVI  182 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~  182 (904)
                      ..+.+|++++|.|.+. +.+.+.+.|+|+ +..+..    ......|.|.++  +|+|.|+|.+.+..|..
T Consensus         9 ~~V~~G~~vtL~C~~~~~~~~~~~~w~k~-g~~~~~----~~~~~~l~I~~~~~~dsG~Y~C~~~~~~~~~   74 (83)
T cd05753           9 RVVFEGEPLVLRCHGWKNKPVYKVTYYRD-GKAKKY----SHSNSNLSIPQATLSDSGSYHCSGIIGSYDY   74 (83)
T ss_pred             ceecCCCCEEEEeeCCCCCcceEEEEEEC-CeEccc----cCCCceEEECccCHHHCEEEEEEEEeCCcee
Confidence            5788999999999986 466778999999 544432    224568999988  79999999999988853

Ig2_FcgammaR_like: domain similar to the second immunoglobulin (Ig)-like domain of Fcgamma-receptors (FcgammaRs). Interactions between IgG and FcgammaR are important to the initiation of cellular and humoral response. IgG binding to FcgammaR leads to a cascade of signals and ultimately to functions such as antibody-dependent-cellular-cytotoxicity (ADCC), endocytosis, phagocytosis, release of inflammatory mediators, etc. FcgammaR has two Ig-like domains. This group also contains FcepsilonRI, which binds IgE with high affinity.

>COG3401 Fibronectin type 3 domain-containing protein [General function prediction only]

Probab=98.46  E-value=1.8e-05  Score=77.20  Aligned_cols=313  Identities=15%  Similarity=0.069  Sum_probs=179.3

Q ss_pred             ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEe
Q psy8771         511 QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVD  590 (904)
Q Consensus       511 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~  590 (904)
                      .+.+|.+.....+.. ............+++...+|.++..|.+..-..+..-.+..|+...+.+..-  .+.......-
T Consensus         4 ~~~~~~~~~t~~~~~-~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~i--~~~~~~~~~~   80 (343)
T COG3401           4 DIDGFVLYRTKKDLK-LKRIGTIKNKYQTHYYDEGLEGEESYPYQEGTTKVDKISYDSERILVKTSFI--ERVRSVFASL   80 (343)
T ss_pred             cceeEEEEEEcccch-hhhhhccccchhhhhhhccccccCcceeeecccccceeeecCcceEEEeeec--cccccccchh
Confidence            457777776665532 2222222224567788999999999998887766654444556655555411  1112222222


Q ss_pred             cCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE-
Q psy8771         591 IQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR-  669 (904)
Q Consensus       591 ~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~-  669 (904)
                      .-+..+.+.|.+..                                           +-....|.|+....+..-...- 
T Consensus        81 ~~~~~~~~~w~~~~-------------------------------------------d~~~~~Y~i~~~~gD~~f~r~~~  117 (343)
T COG3401          81 ERPKSVKVFWSPHP-------------------------------------------DVSVGKYIIQRQNGDGKFLRTGL  117 (343)
T ss_pred             cCcceeeecccccC-------------------------------------------CCCCCeEEEEEecCchhhhhhhH
Confidence            23455888898863                                           3457789998877665521111 


Q ss_pred             -EecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCC---CCcEEEecCCCEEEEEecCCCCCCC
Q psy8771         670 -RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP---QNVSCEPLSSTSIRISWEPPPVERS  745 (904)
Q Consensus       670 -~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P---~~l~~~~~~~~~v~l~W~~~~~~~~  745 (904)
                       ...-...+.-.+|.++..|...|.|.+..+.-..+    +.-.+..|...|   .++++.....+.+.|+|+.++.   
T Consensus       118 ~~n~l~~~~i~s~~~~~~~~~~~Iia~~f~~~~sfs----f~gVE~~~~~~P~ei~~~~~~~d~~~~i~ls~dg~~~---  190 (343)
T COG3401         118 VKNRLFVEFIDSDLGHNEKYMELIIAADFQMGKSFS----FTGVEATPKAEPKEITNVRVSFDLGNNIELSEDGSEA---  190 (343)
T ss_pred             HHhccchhheecccccccceeeeEEeecccccceee----eeeeecccccCCceeeeeeeecCCCCcceeeccCccc---
Confidence             11112344556899999999999999876543222    222222233333   3444556678899999999854   


Q ss_pred             CccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCC-CCCCCCcEE-eecCCCCCCC----
Q psy8771         746 NGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIG-DGPSSYPIT-IRTHEDDPSE----  818 (904)
Q Consensus       746 ~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g-~g~~s~~~~-~~t~~~~P~~----  818 (904)
                         ..+|.|+-.+.+.... ....... +.......+|  |..|...|.+.+..| ++..+.... -.|...++.+    
T Consensus       191 ---~~yy~IY~~~~g~e~~-~~ia~t~~n~y~d~~egl--ga~~~y~VTtVd~~~~es~lp~~~t~~~~~g~~e~pt~~g  264 (343)
T COG3401         191 ---EDYYRIYASDSGNEEY-GFIAQTTENSYYDVKEGL--GAVEYYKVTTVDNTGFESDLPNEPTVGETGGRYEVPTIPG  264 (343)
T ss_pred             ---cceEEEeccCCccccc-cceeeccccchhhhhhcc--CceeEEEEEEEcCCcceeccCCccccccccCCcccccCCC
Confidence               3388887766553322 1111111 3333344555  678888888887544 555555333 3444444433    


Q ss_pred             ----CccCCcceeeCCCCCceeeeeeeecCCceEEecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCC
Q psy8771         819 ----VCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDG  882 (904)
Q Consensus       819 ----v~~~~~~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g  882 (904)
                          ...+.+.|+......+.........+.............+.+..+..+-.|.+.|.+.+..|.+
T Consensus       265 ~t~~~s~i~V~~E~~~~~~av~ytvyr~~~g~~~~~f~it~~d~~d~~~ltg~~~~y~v~~v~~~gls  332 (343)
T COG3401         265 ETTEASFIGVAAEQNQLRQAVTYTVYRVEDGTPTKFFTITETDGQDNDMLTGVEYRYEVVAVDKAGLS  332 (343)
T ss_pred             ceeeeeeeeEEecccccceeeEEeeeeccCCCcceeeeeeeccccchhhccccceeEEEEEecccccc
Confidence                2222347764433333322222222222222344566778888999999999999999988864

>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

Probab=98.40  E-value=4.1e-06  Score=69.47  Aligned_cols=85  Identities=31%  Similarity=0.595  Sum_probs=67.0

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeec--CceEEEEcCCCCCCeEEEEEEEEe
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVD--NNQLTTISDLTPHTIYTIRVQAFT  560 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~p~t~Y~~~V~a~~  560 (904)
                      .+|.++.+.....+++.|+|.++....+.+..|.|.+....   ...|......  ....+.+.+|.|++.|.|+|++.+
T Consensus         2 ~~p~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~p~~~Y~~~v~a~~   78 (93)
T cd00063           2 SPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKG---SGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVN   78 (93)
T ss_pred             cCCCCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCC---CCCCEEeeccCCcccEEEEccccCCCEEEEEEEEEC
Confidence            35667888877889999999997655467789999998865   2345555443  677899999999999999999999


Q ss_pred             CCCCCCCCCc
Q psy8771         561 SVGPGPLSAP  570 (904)
Q Consensus       561 ~~g~~~~S~~  570 (904)
                      ..|.|.++..
T Consensus        79 ~~~~~~~s~~   88 (93)
T cd00063          79 GGGESPPSES   88 (93)
T ss_pred             CCccCCCccc
Confidence            8887766653

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.

>smart00409 IG Immunoglobulin

Probab=98.38  E-value=5.3e-06  Score=67.65  Aligned_cols=76  Identities=32%  Similarity=0.522  Sum_probs=59.9

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--c--ceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--G--RNVLTLDRV--TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~--~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      +.+..|+++.|.|.+.+.+.+.+.|+++++..+....++..  .  ...|.|.++  +|+|.|.|.+.+..+.......|
T Consensus         4 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~v~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~v~~~~~~~~~~~~l   83 (86)
T smart00409        4 VTVKEGESVTLSCEVSGSPPPEVTWYKQGGKLLAESGRFSVSRSGSNSTLTISNVTPEDSGTYTCAATNSSGSASSTTTL   83 (86)
T ss_pred             EEEeCCCeEEEEEEEccCCCCeEEEEECCCEEcCCCCcEEEEEcCCeeEEEEEeeccccCeEEEEEEEcCCCeEEEEEEE
Confidence            77889999999999999988999999973444543444443  2  368999999  69999999999888877666666


Q ss_pred             EE
Q psy8771         189 KV  190 (904)
Q Consensus       189 ~v  190 (904)
                      .|
T Consensus        84 ~V   85 (86)
T smart00409       84 TV   85 (86)
T ss_pred             EE
Confidence            54

>smart00410 IG_like Immunoglobulin like

Probab=98.38  E-value=5.3e-06  Score=67.65  Aligned_cols=76  Identities=32%  Similarity=0.522  Sum_probs=59.9

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--c--ceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--G--RNVLTLDRV--TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~--~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      +.+..|+++.|.|.+.+.+.+.+.|+++++..+....++..  .  ...|.|.++  +|+|.|.|.+.+..+.......|
T Consensus         4 ~~~~~g~~~~l~C~~~~~~~~~~~W~~~~~~~v~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~v~~~~~~~~~~~~l   83 (86)
T smart00410        4 VTVKEGESVTLSCEVSGSPPPEVTWYKQGGKLLAESGRFSVSRSGSNSTLTISNVTPEDSGTYTCAATNSSGSASSTTTL   83 (86)
T ss_pred             EEEeCCCeEEEEEEEccCCCCeEEEEECCCEEcCCCCcEEEEEcCCeeEEEEEeeccccCeEEEEEEEcCCCeEEEEEEE
Confidence            77889999999999999988999999973444543444443  2  368999999  69999999999888877666666


Q ss_pred             EE
Q psy8771         189 KV  190 (904)
Q Consensus       189 ~v  190 (904)
                      .|
T Consensus        84 ~V   85 (86)
T smart00410       84 TV   85 (86)
T ss_pred             EE
Confidence            54

IG domains that cannot be classified into one of IGv1, IGc1, IGc2, IG.

>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

Probab=98.37  E-value=4.4e-06  Score=69.26  Aligned_cols=87  Identities=28%  Similarity=0.497  Sum_probs=67.9

Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEec--ccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIG--LVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~--~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .+|.++++......++.|+|..+....+.+..|.|.+.......+......  ....+.+.+|.|++.|.|+|+|.+..|
T Consensus         2 ~~p~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~l~p~~~Y~~~v~a~~~~~   81 (93)
T cd00063           2 SPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNGGG   81 (93)
T ss_pred             cCCCCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCEEeeccCCcccEEEEccccCCCEEEEEEEEECCCc
Confidence            467778888888999999999986655678899999998763333333332  567899999999999999999999888


Q ss_pred             CCCCCCCee
Q psy8771         700 EGATTPPIP  708 (904)
Q Consensus       700 ~~~~s~~~~  708 (904)
                      .|.++....
T Consensus        82 ~~~~s~~~~   90 (93)
T cd00063          82 ESPPSESVT   90 (93)
T ss_pred             cCCCccccc
Confidence            877665343

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.

>cd05862 Ig1_VEGFR First immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor(R)

Probab=98.36  E-value=2.2e-06  Score=69.17  Aligned_cols=72  Identities=26%  Similarity=0.340  Sum_probs=53.3

Q ss_pred             CCCeEEEEEEccCCCC--eEEEeeCCcccc--C--CCCcee-----ecceEEEEeee--cCCeEEEEEEEecCcceEEEE
Q psy8771         120 DSPLNLSCVAVGSPMP--FVKWRKGQNIEL--T--PDDKLP-----VGRNVLTLDRV--TESENYTCIAASVLGVIETST  186 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p--~i~W~k~~~~~~--~--~~~~~~-----~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~  186 (904)
                      |+++.|.|.+.|++.+  .+.|..++....  .  ...+..     .....|.|.++  +|+|.|+|.|.|..|...+++
T Consensus         1 Ge~~~L~C~~~~~~~~~~~~~W~~p~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~DsG~Y~C~a~n~~~~~~~~t   80 (86)
T cd05862           1 GEKLVLNCTARTELNVGIDFQWDYPGKKEQRAKSVSENRRSLQEHTELSSTLTIENVTLSDLGRYTCTASSGQMIAKNST   80 (86)
T ss_pred             CCcEEEEEEEEeCCCCcEEEEEEcCCcccccceecccccccccccceeeeEEEEecCCcccCEEEEEEEeecceEecccE
Confidence            7899999999987754  679988733221  1  110111     12457999998  699999999999999888888


Q ss_pred             EEEEE
Q psy8771         187 IVKVQ  191 (904)
Q Consensus       187 ~l~v~  191 (904)
                      .|.|.
T Consensus        81 ~~~V~   85 (86)
T cd05862          81 IVIVH   85 (86)
T ss_pred             EEEEe
Confidence            88876

IG1_VEGFR: first immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor(R). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGF_A interacts with both VEGFR-1 and VEGFR-2. VEGFR-1 binds strongest to VEGF, VEGF-2 binds more weakly. VEGFR-3 appears not to bind VEGF, but binds other members of the VEGF family (VEGF-C and -D). VEGFRs bind VEGFs with high affinity with the IG-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-2 is a major mediator of the mitogenic, angioge

>cd05896 Ig1_IL1RAPL-1_like First immunoglobulin (Ig)-like domain of X-linked interleukin-1 receptor accessory protein-like 1 (IL1RAPL-1)

Probab=98.29  E-value=4.7e-06  Score=67.65  Aligned_cols=75  Identities=16%  Similarity=0.267  Sum_probs=56.5

Q ss_pred             eEEecCCCeEEEEEEc-----------cCCCCeEEEeeCCccccCC-------CCceeecceEEEEeee--cCCeEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAV-----------GSPMPFVKWRKGQNIELTP-------DDKLPVGRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~-----------g~p~p~i~W~k~~~~~~~~-------~~~~~~~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      +.+.+|+++.|.|...           .+....|.|+|+ +..+..       ..|+...+..|.|..+  +|+|.|+|+
T Consensus        10 ~~~~~GE~v~l~C~~~~~~~~~~~~~~~~~~~~v~WyK~-~~~~~~~~~~~~~~~Ri~~~~~~Lwf~Pa~~eDSG~Y~C~   88 (104)
T cd05896          10 YMVLAGEPVRIKCALFYGYIRTNYSMAQSAGLSLMWYKS-SGDGEEPIEIIFDGVRMSKEEDSIWFRPAELQDSGLYTCV   88 (104)
T ss_pred             EEEcCCCeEEEECCCccccccccccccccCCceEEEEEC-CCCCCCCCcccccceeEEEeCCEEEEEeCChhhCeEEEEE
Confidence            8889999999999862           222347999999 322222       1377778999999998  799999999


Q ss_pred             EEecCcceEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKV  190 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v  190 (904)
                      +.|.......+..|.|
T Consensus        89 ~rN~t~C~~~~i~l~V  104 (104)
T cd05896          89 LRNSTYCMKVSMSLTV  104 (104)
T ss_pred             ECCCCcceEEEEEEEC
Confidence            9998876666655543

Ig1_ IL1RAPL-1_like: domain similar to the first immunoglobulin (Ig)-like domain of X-linked interleukin-1 receptor accessory protein-like 1 (IL1RAPL-1). IL-1 alpha and IL-1 beta are cytokines which participates in the regulation of inflammation, immune responses, and hematopoiesis. These cytokines bind to the IL-1 receptor type 1 (IL1R1), which is activated on additional association with an accessory protein, IL1RAP. IL-1 also binds a second receptor designated type II (IL1R2). Mature IL1R1 consists of three Ig-like domains, a transmembrane domain, and a large cytoplasmic domain. Mature IL1R2 is organized similarly except that it has a short cytoplasmic domain. The latter does not initiate signal transduction. A naturally occurring cytokine IL-1RA (IL-1 receptor antagonist) is widely expressed and binds to IL-1 receptors, inhibiting the binding of

>PF13895 Ig_2: Immunoglobulin domain; PDB: 2V5R_B 2V5M_A 2V5S_B 2GI7_A 3LAF_A 4DEP_C 3O4O_B 2EC8_A 2E9W_A 1J87_A

Probab=98.28  E-value=3.5e-06  Score=67.71  Aligned_cols=75  Identities=33%  Similarity=0.531  Sum_probs=53.3

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc-
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV-  181 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~-  181 (904)
                      |.|...+   ..+.+|++++|.|.+.|.|.+.+.|+++ +..+..      ..+.+.|.++  +++|.|+|.+.+..+. 
T Consensus         2 P~l~~~~---~~v~~g~~~~l~C~~~~~p~~~~~w~~~-~~~~~~------~~~~~~~~~~~~~~~g~y~C~~~~~~~~~   71 (80)
T PF13895_consen    2 PVLSSSP---QSVEEGDSVTLTCSVSGNPPPQVQWYKN-GSPINS------SQNGLFIPNVSPEDSGNYTCRASNGSGSN   71 (80)
T ss_dssp             -EEEEES---SEEETTSEEEEEEEEESSSSSEEEEEET-TEEEEE------ESSEEEESSEEGGGTEEEEEEEEETTEEE
T ss_pred             cEEEccc---eEEeCCCcEEEEEEEEcccceeeeeeee-eeeeee------eeeeeeeeeeccccCEEEEEEEEeCCCCe
Confidence            4454433   5578999999999999999999999998 544431      2222666666  7999999999996653 


Q ss_pred             eEEEEEEE
Q psy8771         182 IETSTIVK  189 (904)
Q Consensus       182 ~~~~~~l~  189 (904)
                      .+....|.
T Consensus        72 ~s~~~~v~   79 (80)
T PF13895_consen   72 TSTSVNVT   79 (80)
T ss_dssp             EEEEEEEE
T ss_pred             EeeeEEee
Confidence            33444443

...

>cd05860 Ig4_SCFR Fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR)

Probab=98.28  E-value=1.9e-05  Score=64.04  Aligned_cols=77  Identities=23%  Similarity=0.189  Sum_probs=61.0

Q ss_pred             ceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCCCC--ceee-------cceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         114 LLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDD--KLPV-------GRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       114 ~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~~~--~~~~-------~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      .+.|.+|+++.|.|.+...|+|+ +.|.++ +..+....  .+..       -...|.|..|  +++|.|+|.|.|..+.
T Consensus        12 ~~~v~~gE~~~L~V~ieAYP~p~~~~W~~~-~~~l~~~~~~~~~~~~~~~~rY~S~L~L~Rlk~~E~G~YTf~a~N~~~~   90 (101)
T cd05860          12 TIFVNAGENLDLIVEYEAYPKPEHQQWIYM-NRTLTNTSDHYVKSRNESNNRYVSELHLTRLKGTEGGTYTFLVSNSDAS   90 (101)
T ss_pred             eEEEECCCCEEEEEEEEeCCCCeeeEEEcC-CcccCccccceeEEeccCceEEEEEEEEeecChhhCcEEEEEEECCCCe
Confidence            38899999999999999999998 999998 54342221  1221       1247899998  6999999999999998


Q ss_pred             eEEEEEEEEE
Q psy8771         182 IETSTIVKVQ  191 (904)
Q Consensus       182 ~~~~~~l~v~  191 (904)
                      .+.+..|.|.
T Consensus        91 ~s~tF~l~v~  100 (101)
T cd05860          91 ASVTFNVYVN  100 (101)
T ss_pred             EEEEEEEEEe
Confidence            8888887765

Ig4_SCFR: The fourth Immunoglobulin (Ig)-like domain in stem cell factor receptor (SCFR). SCFR is organized as an extracellular component having five IG-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. SCFR and its ligand SCF are critical for normal hematopoiesis, mast cell development, melanocytes and gametogenesis. SCF binds to the second and third Ig-like domains of SCFR. This fourth Ig-like domain participates in SCFR dimerization, which follows ligand binding. Deletion of this fourth domain abolishes the ligand-induced dimerization of SCFR and completely inhibits signal transduction.

>cd05872 Ig_Sema4B_like Immunoglobulin (Ig)-like domain of the class IV semaphorin Sema4B

Probab=98.20  E-value=1.1e-05  Score=63.86  Aligned_cols=70  Identities=17%  Similarity=0.214  Sum_probs=56.0

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      +++..|+++.|+|...+. .+.+.|+++ +..+..+.++......|.|.++  +|+|.|.|.+. ..|-....+.
T Consensus         6 ~tv~~g~~v~L~C~~~s~-~A~v~W~~n-g~~l~~~~r~~~~~~GLlI~~~~~~dsG~Y~C~s~-E~gf~~~~~~   77 (85)
T cd05872           6 RTVAPGADVVLPCQLRSN-LASPVWLFN-GTPLNAQFSYRVGTDGLLILVTSPEHSGTYRCYSE-EEGFQQLVAS   77 (85)
T ss_pred             EEEecCCCEEEECCCCCC-CccEEEEEC-CcccCCCcceEEeCCCCEEEECCHhhCEEEEEEEe-cCCCeEEEEE
Confidence            889999999999999987 558999999 7777777788877777888888  69999999876 4454443333

Ig_Sema4B_like; Immunoglobulin (Ig)-like domain of Sema4B_like. Sema4B is a Class IV semaphorin. Semaphorins are classified based on structural features additional to the Sema domain. Sema4B has extracellular Sema and Ig domains, a transmembrane domain and a short cytoplasmic domain. Sema4B has been shown to preferentially regulate the development of the postsynaptic specialization at the glutamatergic synapses. This cytoplasmic domain includes a PDZ-binding motif upon which the synaptic localization of Sem4B is dependent. Sema4B is a ligand of CLCP1, CLCP1 was identified in an expression profiling analysis, which compared a highly metastic lung cancer subline with its low metastic parental line. Sema4B was shown to promote CLCP1 endocytosis, and their interaction is a potential target for therapeutic intervention of metastasis.

>cd05897 Ig2_IL1R2_like Second immunoglobulin (Ig)-like domain of interleukin-1 receptor-2 (IL1R2)

Probab=98.20  E-value=1e-05  Score=65.70  Aligned_cols=69  Identities=20%  Similarity=0.259  Sum_probs=52.7

Q ss_pred             eEEecCCCeEEEEEE-c----cCCCCeEEEeeCCccccCCC-Cceee--cceEEEEeee--cCCeEEEEEEEecCcceEE
Q psy8771         115 LEVMLDSPLNLSCVA-V----GSPMPFVKWRKGQNIELTPD-DKLPV--GRNVLTLDRV--TESENYTCIAASVLGVIET  184 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~-~----g~p~p~i~W~k~~~~~~~~~-~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~  184 (904)
                      +.+..|.+..|.|.- .    ..+.++|+|+|| +.++... .++..  +...|.|.++  +|+|.|+|.|.+..|....
T Consensus         5 ~~~~~~~~~~l~Cp~~~~f~~~~~~~~v~WYKd-~~~l~~~~~~~~~~~~~~~L~I~~v~~~D~G~YtC~~~~~~~g~~y   83 (95)
T cd05897           5 QILFTSTSGKLVCPDLSDFTINRTDVELQWYKD-SVLLDKDNEKFYSLKGSTYLHIIDVSLNDSGYYTCKLQFTHEGKKY   83 (95)
T ss_pred             eEeccccCcEEECCCHHHcccCCCCCcEEEccC-CEECcCCCcceEecCCCCEEEEEEcChhhCEEEEEEEEEeeCCEEE
Confidence            567789999999973 2    346679999999 7766543 34443  4568999999  6999999999998876543

Ig2_IL1R2_like: domain similar to the second immunoglobulin (Ig)-like domain of interleukin-1 receptor-2 (IL1R2). IL-1 alpha and IL-1 beta are cytokines which participate in the regulation of inflammation, immune responses, and hematopoiesis. These cytokines bind to the IL-1 receptor type 1 (IL1R1), which is activated on additional association with an accessory protein, IL1RAP. IL-1 also binds the type II (IL1R2) represented in this group. Mature IL1R2 consists of three IG-like domains, a transmembrane domain, and a short cytoplasmic domain. It lacks the large cytoplasmic domain of Mature IL1R1, and does not initiate signal transduction. A naturally occurring cytokine IL-1RA (IL-1 receptor antagonist) is widely expressed and binds to IL-1 receptors, inhibiting the binding of IL-1 alpha and IL-1 beta.

>cd05885 Ig2_Necl-4 Second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4, also known as cell adhesion molecule 4 (CADM4))

Probab=98.18  E-value=1.5e-05  Score=62.16  Aligned_cols=58  Identities=17%  Similarity=0.290  Sum_probs=42.4

Q ss_pred             eEEEEEEc-cCCCCeEEEeeCCccccCCCCcee------ecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         123 LNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLP------VGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       123 ~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~------~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      ++|.|... |.|.++|+|+|+ +.++.......      ...+.|.|.-.  +|++.|.|.|.|..+.
T Consensus         2 ~~L~C~s~~skP~a~i~W~k~-~~~l~~~~~~~~~~~~~t~~s~L~~~~~~~Ddg~~~~C~A~n~a~~   68 (80)
T cd05885           2 VELTCLSPRSKPAATLRWYRD-RKELKGVISQQENGKTVSVSNTIRFPVDRKDDGAILSCEASHPALV   68 (80)
T ss_pred             EEEEEeCCCccCCCeEEEEEC-CEECCCCcccccCCceEEEEEEEEEEeeeccCCcEEEEEEEChhhC
Confidence            68999988 578999999999 77775432111      12335666555  6899999999998875

Ig2_Necl-4: second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4, also known as cell adhesion molecule 4 (CADM4)). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1-Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. Ig domains are likely to participate in ligand binding and recognition. Necl-4 is expressed on Schwann cells, and plays a key part in initiating peripheral nervous system (PNS) myelination. In injured peripheral nerve cells, the mRNA signal for both Necl-4 and Necl-5 was observed to be elevated. Necl-4 participates in cell-cell adhesion and is proposed to play a role in tumor suppression.

>cd05881 Ig1_Necl-2 First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule 2 (also known as cell adhesion molecule 1 (CADM1))

Probab=98.11  E-value=3.8e-05  Score=62.53  Aligned_cols=63  Identities=13%  Similarity=0.246  Sum_probs=49.3

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCcccc-------CCCCceee-----cceEEEEeee--cCCeEEEEEEEe
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIEL-------TPDDKLPV-----GRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~-------~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      +++.+|++++|.|.+.+.....+.|++.+...+       ..+.|+..     +.-+|.|.++  +|+|.|.|.+..
T Consensus         7 vtv~~G~ta~L~C~v~~~~~~~v~w~~~~~~~i~~~~~~~~~d~Rf~~~~~~~~~~tL~I~~vq~~D~G~Y~Cqv~t   83 (95)
T cd05881           7 VTVVEGEVAIISCRVKNNDDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSSNELRVSLSNVSLSDEGRYFCQLYT   83 (95)
T ss_pred             eEEcCCCcEEEEEEEccCCccEEEEEecCCcEEEecCccccCCcCEEEEeCCCCEEEEEECcCCcccCEEEEEEEEc
Confidence            899999999999999999888889998732221       34456653     2346999999  699999999874

Ig1_Necl-2: domain similar to the N-terminal immunoglobulin (Ig)-like domain of nectin-like molecule-2, Necl-2 (also known as cell adhesion molecule 1 (CADM1), SynCAM1, IGSF4A, Tslc1, sgIGSF, and RA175). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). They all have an extracellular region containing three Ig-like domains, a transmembrane region, and a cytoplasmic region. The N-terminal Ig-like domain of the extracellular region, belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-2 has Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-2 is expressed in a wide variety of tissues, and is a

>KOG3632|consensus

Probab=98.11  E-value=1.9e-05  Score=86.82  Aligned_cols=262  Identities=19%  Similarity=0.270  Sum_probs=169.7

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCC--CceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCC-CCCeEEEEEEEEe
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPN--GQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLT-PHTIYTIRVQAFT  560 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~--~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-p~t~Y~~~V~a~~  560 (904)
                      -|+.+.+......++.|-|++|..+.  +....|.+.....-      ......++.+...+..|. .+..|.+.|.+..
T Consensus       580 ypr~~~~vkqla~sv~vawepps~pP~~~~~~~~~~~v~~el------rq~l~~gs~tka~~E~ld~~a~s~~isvq~lt  653 (1335)
T KOG3632|consen  580 YPRTGAAVKQLAGSVHVAWEPPSSPPFTAPARMIGATVLMEL------RQTLYAGSLTKAMQESLDNSAHSGYISVQRLT  653 (1335)
T ss_pred             cccchhhhhhhccceeeeccCCCCCCccccceeeeeecchhh------hhhcccccchHHHHhhccccCCceeeehhhhh
Confidence            45666666777889999999975433  24555555443221      112233444444455544 4557889999999


Q ss_pred             CCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEe
Q psy8771         561 SVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLA  640 (904)
Q Consensus       561 ~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~  640 (904)
                      ..|....... ...+....+..|.++++..++..+..++|-+-..                                   
T Consensus       654 SrGsqd~lrc-~Llvgg~a~vvpsqlrv~n~tqtSa~itwvp~ns-----------------------------------  697 (1335)
T KOG3632|consen  654 SRGSQDQLRC-ILLVGGAAPVVPSQLRVWNATQTSAMITWVPFNS-----------------------------------  697 (1335)
T ss_pred             ccCCCCccee-eEeccccccccchhhhhhhhhchhhheeeeecCC-----------------------------------
Confidence            8887654432 3344555678899999999999999999987642                                   


Q ss_pred             ccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcC-CC--------CCCCCCCeeEEe
Q psy8771         641 WSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP-RG--------EGATTPPIPVRT  711 (904)
Q Consensus       641 w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~-~G--------~~~~s~~~~~~t  711 (904)
                               ..  -.+.|...+   ...........+++.+|.|++.|.++|-|.-. .+        .+.....+.|+|
T Consensus       698 ---------n~--~Hviyln~e---E~~ps~a~~y~ytf~~lrpgt~y~a~vea~~p~q~pwdl~~v~~etr~atv~f~t  763 (1335)
T KOG3632|consen  698 ---------NF--LHVIYLNAE---EPRPSVAEMYNYTFMRLRPGTDYWASVEAALPRQEPWDLRMVPMETRQATVLFRT  763 (1335)
T ss_pred             ---------Cc--ceeeecCCc---cCCCchhhhhHHHHhccCCCCccceecccccCcCCCcccccchhhhhccceeeec
Confidence                     11  123333222   11223344567889999999999999998765 11        123356788999


Q ss_pred             cCCCCCCCCCCcEEE-ecCCCEEEEEecCCCCCCC---Cc-cEEEEEEEEEEccCCCCccEEEEec--CcceEEecCCCC
Q psy8771         712 KQYVPGAPPQNVSCE-PLSSTSIRISWEPPPVERS---NG-HIVYYKLQFVETGRSDSEASIVTLK--NQTSFVLDELKK  784 (904)
Q Consensus       712 ~~~~p~~~P~~l~~~-~~~~~~v~l~W~~~~~~~~---~g-~~~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~i~~L~p  784 (904)
                      ...-|..||.++++. ..+...+.++|.++..+..   || .+++|.|+.....     ...+...  ..+.+.+..|+-
T Consensus       764 LpAGppappldV~vE~g~spg~l~vswrPptldsag~sngv~vtgYavyadgqk-----v~Evafptagst~VelsQlq~  838 (1335)
T KOG3632|consen  764 LPAGPPAPPLDVKVETGGSPGRLEVSWRPPTLDSAGCSNGVAVTGYAVYADGQK-----VEEVAFPTAGSTKVELSQLQD  838 (1335)
T ss_pred             ccCCCCCCchheeeecCCCCceeeeeccCceeccccccCceeeeeeeeeeCCce-----eeeeecccCCceEEEeeeehh
Confidence            999999999999885 4567899999999976442   23 6899999886321     1111122  555566666766


Q ss_pred             C-ceEEEEEEEeeCCCCCCCCCc
Q psy8771         785 W-TEYRIWVLAGTSIGDGPSSYP  806 (904)
Q Consensus       785 ~-t~Y~~~V~a~~~~g~g~~s~~  806 (904)
                      + ..=.|.|+.....|++..|.+
T Consensus       839 ~l~~~~V~vRtms~~gesvdsip  861 (1335)
T KOG3632|consen  839 GLYHGAVGVRTMSVPGESVDSIP  861 (1335)
T ss_pred             hheecceeEEecccCcccccccc
Confidence            3 233677887777787655543

>PF00047 ig: Immunoglobulin domain The Prosite family only concerns antibodies and MHCs

Probab=98.11  E-value=4.6e-06  Score=63.39  Aligned_cols=55  Identities=29%  Similarity=0.541  Sum_probs=40.8

Q ss_pred             CCCeEEEEEE-ccCCCCeEEEeeCCccccCCCCceee--cce----EEEEeee--cCCeEEEEEE
Q psy8771         120 DSPLNLSCVA-VGSPMPFVKWRKGQNIELTPDDKLPV--GRN----VLTLDRV--TESENYTCIA  175 (904)
Q Consensus       120 g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~----~l~i~~l--~d~g~Y~c~a  175 (904)
                      |+.++|.|.+ .+.+...+.|.++ +..+........  ...    .|.|.++  +|+|.|+|.|
T Consensus         1 G~~v~L~C~~~~~~~~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~v   64 (64)
T PF00047_consen    1 GSSVTLTCSVSSGPPPTTVTWSKN-GQSLPEGSTTNRSTNSVSSTSRLTISNVTPEDSGTYTCVV   64 (64)
T ss_dssp             TSEEEEEEEEEESSSTSEEEEEET-TTTTSEEEEEEEEETTTEEEEEEEESSCTGGGTEEEEEEE
T ss_pred             CCeEEEEeecCCCCCCcEEEEEEC-CccccCcceeEeecccceeeeEEEEccCCHHHCEEEEEEC
Confidence            7889999999 7888899999999 444433322221  111    2999999  6999999986

; InterPro: IPR013151 Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions. The Pfam alignments do not include the first and last strand of the immunoglobulin-like domain.; PDB: 1B6U_A 3O4O_C 3VH8_H 1BIH_A 2C9A_A 2V5Y_A 1BQH_K 2ATP_A 3B9K_A 1NEZ_H ....

>PF13927 Ig_3: Immunoglobulin domain; PDB: 2D3V_A 1G0X_A 1VDG_A 1P7Q_D 3D2U_H 1UFU_A 1UGN_A 3VH8_H 3OQ3_B 4DKD_C

Probab=98.04  E-value=3.3e-06  Score=66.80  Aligned_cols=72  Identities=31%  Similarity=0.584  Sum_probs=49.1

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      +|.|...+.. .....+. ++|.|.+.+.| .+.++|+...................|.|.++  +|.|.|+|.|.|
T Consensus         1 kP~I~~~~~~-~~~~~~~-~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~~g~y~C~a~N   75 (75)
T PF13927_consen    1 KPQISVPPPP-VVTSGGS-VTLTCSAEGGPPPPSISWYDSNPSFNSNSRGSSSSNSTLTISNVTRSDNGTYTCIASN   75 (75)
T ss_dssp             ESEEEEESTS-EEETTEE-EEEEEEESSEESSEEEEEETEEEEEEEEEEEEEEEEEEEEESSCCGGGTEEEEEEEEE
T ss_pred             CCEEEEcCCC-cEeecee-EEEEEEEccccCCeEEEEEecCCceeeeeeeccceeeEEEEccCCHHhCcEEEEEEEC
Confidence            4667766665 5544445 99999999998 78999992101111111122235678999988  699999999987

...

>cd05774 Ig_CEACAM_D1 First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)

Probab=98.04  E-value=3.1e-05  Score=64.62  Aligned_cols=75  Identities=13%  Similarity=0.175  Sum_probs=51.4

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccc----c--------------CCCCceee-cceEEEEeee--cCCeEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIE----L--------------TPDDKLPV-GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~----~--------------~~~~~~~~-~~~~l~i~~l--~d~g~Y~c  173 (904)
                      ..+.+|+++.|.|...-.+...++|+|+....    +              ....|..+ .+++|.|.++  +|+|.|+|
T Consensus         8 ~~~~~G~~V~L~v~~~p~~~~~~~W~kg~~~~~~~~I~~y~~~~~~~~~gp~~~gR~~~~~ngSL~I~~v~~~D~G~Y~~   87 (105)
T cd05774           8 PQVAEGENVLLLVHNLPENLLAYAWYKGKTVSPNFLIASYIISTNSSTPGPAYSGRETIYPNGSLLIQNVTQKDTGFYTL   87 (105)
T ss_pred             CcccCCCCEEEEecCCCCCceEEEEEcCCCCCCCEEEEEEECCCcccccCcccCCcEEEeCCCcEEEecCCcccCEEEEE
Confidence            55679999999986654444489999973211    0              01234333 5789999999  69999999


Q ss_pred             EEEecCc-ceEEEEEEE
Q psy8771         174 IAASVLG-VIETSTIVK  189 (904)
Q Consensus       174 ~a~n~~g-~~~~~~~l~  189 (904)
                      .+.+... ..++...|.
T Consensus        88 ~v~~~~~~~~~~~v~l~  104 (105)
T cd05774          88 QTITTNFQVEQATVHLQ  104 (105)
T ss_pred             EEEeCCccEEEEEEEEE
Confidence            9998774 344554443

IG_CEACAM_D1: immunoglobulin (Ig)-like domain 1 in carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) protein subfamily. The CEA family is a group of anchored or secreted glycoproteins, expressed by epithelial cells, leukocytes, endothelial cells and placenta. The CEA family is divided into the CEACAM and pregnancy-specific glycoprotein (PSG) subfamilies. This group represents the CEACAM subfamily. CEACAM1 has many important cellular functions, it is a cell adhesion molecule, and a signaling molecule that regulates the growth of tumor cells, it is an angiogenic factor, and is a receptor for bacterial and viral pathogens, including mouse hepatitis virus (MHV). In mice, four isoforms of CEACAM1 generated by alternative splicing have either two [D1, D4] or four [D1-D4] Ig-like domains on the cell surface. This family corresponds to the D

>COG3401 Fibronectin type 3 domain-containing protein [General function prediction only]

Probab=97.99  E-value=0.00083  Score=65.99  Aligned_cols=298  Identities=15%  Similarity=0.087  Sum_probs=169.5

Q ss_pred             CCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEE
Q psy8771         439 TPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVY  518 (904)
Q Consensus       439 ~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~  518 (904)
                      ..++...+|.++..|.|.--..+....+..++...+.+..-   .+.+.+...-.-+..+.+-|.+..+  -.+..|.|+
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~i---~~~~~~~~~~~~~~~~~~~w~~~~d--~~~~~Y~i~  104 (343)
T COG3401          30 QTHYYDEGLEGEESYPYQEGTTKVDKISYDSERILVKTSFI---ERVRSVFASLERPKSVKVFWSPHPD--VSVGKYIIQ  104 (343)
T ss_pred             hhhhhhccccccCcceeeecccccceeeecCcceEEEeeec---cccccccchhcCcceeeecccccCC--CCCCeEEEE
Confidence            45567888999999988877666554444555555554311   1111122222334569999998432  346789999


Q ss_pred             EEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEE
Q psy8771         519 YTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTL  598 (904)
Q Consensus       519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l  598 (904)
                      ....+.. ..........-...+.-..|.++..|...|.+.+..+.-..|-...-.+....|....++++.....+.+.|
T Consensus       105 ~~~gD~~-f~r~~~~~n~l~~~~i~s~~~~~~~~~~~Iia~~f~~~~sfsf~gVE~~~~~~P~ei~~~~~~~d~~~~i~l  183 (343)
T COG3401         105 RQNGDGK-FLRTGLVKNRLFVEFIDSDLGHNEKYMELIIAADFQMGKSFSFTGVEATPKAEPKEITNVRVSFDLGNNIEL  183 (343)
T ss_pred             EecCchh-hhhhhHHHhccchhheecccccccceeeeEEeecccccceeeeeeeecccccCCceeeeeeeecCCCCccee
Confidence            8876643 111001111112234566899999999999999887654344222222333344445566666777888999


Q ss_pred             EEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceE-
Q psy8771         599 AWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETY-  677 (904)
Q Consensus       599 ~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~-  677 (904)
                      +|+.++.                                             ...|+|+-...+......+.....+.+ 
T Consensus       184 s~dg~~~---------------------------------------------~~yy~IY~~~~g~e~~~~ia~t~~n~y~  218 (343)
T COG3401         184 SEDGSEA---------------------------------------------EDYYRIYASDSGNEEYGFIAQTTENSYY  218 (343)
T ss_pred             eccCccc---------------------------------------------cceEEEeccCCccccccceeeccccchh
Confidence            9998764                                             337777666555444444443333333 


Q ss_pred             -EEeCCCCCcEEEEEEEEEcCCC-CCCCCCCeeE-EecCCCCCC-CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEE
Q psy8771         678 -SLTGLYPNTLYYIWLAAQSPRG-EGATTPPIPV-RTKQYVPGA-PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYK  753 (904)
Q Consensus       678 -~l~~L~p~t~Y~v~V~a~~~~G-~~~~s~~~~~-~t~~~~p~~-~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~  753 (904)
                       ...+|  |..|...|.+++..| ++..+....+ .|....+.. +|....    ....+.|.|+....    -....|.
T Consensus       219 d~~egl--ga~~~y~VTtVd~~~~es~lp~~~t~~~~~g~~e~pt~~g~t~----~~s~i~V~~E~~~~----~~av~yt  288 (343)
T COG3401         219 DVKEGL--GAVEYYKVTTVDNTGFESDLPNEPTVGETGGRYEVPTIPGETT----EASFIGVAAEQNQL----RQAVTYT  288 (343)
T ss_pred             hhhhcc--CceeEEEEEEEcCCcceeccCCccccccccCCcccccCCCcee----eeeeeeEEeccccc----ceeeEEe
Confidence             34455  778888888888654 4444443322 233332221 122111    23345677776522    1234455


Q ss_pred             EEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCCCC
Q psy8771         754 LQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG  801 (904)
Q Consensus       754 v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g  801 (904)
                      ++--..+..   .....+ ..+......+..+..|.+.|.+.+..|.+
T Consensus       289 vyr~~~g~~---~~~f~i-t~~d~~d~~~ltg~~~~y~v~~v~~~gls  332 (343)
T COG3401         289 VYRVEDGTP---TKFFTI-TETDGQDNDMLTGVEYRYEVVAVDKAGLS  332 (343)
T ss_pred             eeeccCCCc---ceeeee-eeccccchhhccccceeEEEEEecccccc
Confidence            543333211   111111 56667778888999999999999988864

>cd05759 Ig2_KIRREL3-like Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)

Probab=97.98  E-value=4.1e-05  Score=61.48  Aligned_cols=59  Identities=22%  Similarity=0.350  Sum_probs=40.5

Q ss_pred             CeEEEEEEcc-CCCCeEEEeeCCccccCCCCcee--e-c------ceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         122 PLNLSCVAVG-SPMPFVKWRKGQNIELTPDDKLP--V-G------RNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       122 ~~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~~~~--~-~------~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      +++|.|.+.| .|.+.|+|+|+ +..+.......  . +      ...|.|...  ++++.|+|.|.|..-.
T Consensus         1 ~~~L~C~v~g~~P~~~v~W~~~-g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~~~y~C~a~n~~l~   71 (82)
T cd05759           1 PYNLTCRARGAKPAAEIIWFRD-GEVLDGATYSKELLKDGKRETTVSTLPITPSDHDTGRTFTCRARNEALP   71 (82)
T ss_pred             CEEEEEEEeCccCCCEEEEEEC-CEEccCceeeeeEecCCCeEEEEEEEEEeCceecCCCEEEEEEcCccCC
Confidence            4689999997 68899999999 66664432111  1 1      124555544  4788999999986644

Ig2_KIRREL3-like: domain similar to the second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2). This protein has five Ig-like domains, one transmembrane domain, and a cytoplasmic tail. Included in this group is mammalian Kirrel (Neph1), Kirrel2 (Neph3), and Drosophila RST (irregular chiasm C-roughest) protein. These proteins contain multiple Ig domains, have properties of cell adhesion molecules, and are important in organ development.

>smart00060 FN3 Fibronectin type 3 domain

Probab=97.91  E-value=0.00012  Score=58.67  Aligned_cols=78  Identities=28%  Similarity=0.520  Sum_probs=54.8

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecC-ceEEEEcCCCCCCeEEEEEEEEeCC
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDN-NQLTTISDLTPHTIYTIRVQAFTSV  562 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~p~t~Y~~~V~a~~~~  562 (904)
                      +|.++.+.....+++.|+|+++...+.  .+|.+.|..........|....... ...+.+.+|.|++.|.|+|+|.+..
T Consensus         3 ~p~~~~~~~~~~~~~~v~W~~~~~~~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~v~v~a~~~~   80 (83)
T smart00060        3 PPSNLRVTDVTSTSVTLSWEPPPDDGI--TGYIVGYRVEYREEGSSWKEVNVTPSSTSYTLTGLKPGTEYEFRVRAVNGA   80 (83)
T ss_pred             CCCcEEEEEEeCCEEEEEECCCCCCCC--CccEEEEEEEEecCCCccEEEEecCCccEEEEeCcCCCCEEEEEEEEEccc
Confidence            344577777777799999998654432  6787777765432112344444333 4679999999999999999999975


Q ss_pred             C
Q psy8771         563 G  563 (904)
Q Consensus       563 g  563 (904)
                      |
T Consensus        81 g   81 (83)
T smart00060       81 G   81 (83)
T ss_pred             C
Confidence            5

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

>cd05751 Ig1_LILRB1_like First immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILR)B1 (also known as LIR-1) and similar proteins

Probab=97.86  E-value=6.1e-05  Score=61.72  Aligned_cols=70  Identities=16%  Similarity=0.237  Sum_probs=51.1

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-CceeecceEEEEeee--cCCeEEEEEEEec
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPVGRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      |.|...|.  ..+..|++++|.|... .+...+.|+|+ |...... .........|.|.++  +|+|.|+|+..+.
T Consensus         3 P~L~a~p~--~vV~~G~~VtL~C~~~-~~~~~f~l~k~-g~~~~~~~~~~~~~~~~f~i~~v~~~~~G~Y~C~~~~~   75 (91)
T cd05751           3 PSLWAEPS--SVVPLGKPVTLRCQGP-YGAVEYRLYRE-GSTFAVKKPPEPQNKAKFFIPSMKREHAGRYRCYYRSG   75 (91)
T ss_pred             CEEEecCC--CccCCCCcEEEEEecC-CCCCEEEEEEC-CCCccccccCCCceeEEEEccCCChhHCEEEEEEEECC
Confidence            55666664  6788999999999885 66778999999 5443221 111234567999999  6999999999875

Ig1_LILRB1_like: domain similar to the first immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILR)B1 (also known as LIR-1). This group includes, LILRA5 (LIR9), an activating natural cytotoxicity receptor NKp46, and the immune-type receptor glycoprotein VI (GPVI). LILRs are a family of immunoreceptors expressed on expressed on T and B cells, on monocytes, dendritic cells, and subgroups of natural killer (NK) cells. The human LILR family contains nine proteins (LILRA1-3,and 5, and LILRB1-5). From functional assays, and as the cytoplasmic domains of various LILRs, for example LILRB1 (LIR-1), LILRB2 (LIR-2), and LILRB3 (LIR-3) contain immunoreceptor tyrosine-based inhibitory motifs (ITIMs) it is thought that LIR proteins are inhibitory receptors. Of the eight LIR family proteins, only LIR-1(LILRB1), and LIR-2 (LILRB2),

>KOG4228|consensus

Probab=97.85  E-value=0.00012  Score=83.24  Aligned_cols=138  Identities=34%  Similarity=0.399  Sum_probs=98.8

Q ss_pred             EEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeec
Q psy8771         170 NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISG  249 (904)
Q Consensus       170 ~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~  249 (904)
                      .|.|.+....|-....+.+.|.       .-|..|....+......+....|.........|.+.++....+  +..+..
T Consensus         1 ~Y~~~~~~~~~~~~~~~~v~v~-------~~p~~~~~~~vt~~~~~~~~~~~~~~~t~~~~y~v~~~~~~s~--~~~~~~   71 (1087)
T KOG4228|consen    1 NYTCLARSGLGPGELITYVRVN-------GGPPGPSTPNVTGSTATSWVQAELLGSTWPNYYQVIFKALSSG--YGYIDV   71 (1087)
T ss_pred             CeeeeecccCCCccceEEEEec-------CCCCCCCCcccccccccceeehhhccCCChhhhheeeeEeccC--cceeec
Confidence            4999999999998888888888       6666676777888888899999998866778888888876554  444444


Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCC
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP  318 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p  318 (904)
                      .....+....+.+-+.+.+  .+.|..|.+..+.+..-++....+...+....+.......+.+.|..+
T Consensus        72 ~~~~~~s~~~~~~~~~~~~--~evnt~~~a~~~~~~~~rt~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  138 (1087)
T KOG4228|consen   72 DLTTRLSYPCLSPPSFLEL--VEVNTIGRAPFQCPVAPRTGEQATLSLQRDVQALMLSAATAHVNWRRF  138 (1087)
T ss_pred             cceeecccCCCCCcchhhh--hhcccccccccccccCCccccccccccccchhhhhhhhhhhccCcccc
Confidence            4445677788888888887  888888887766666555555444445555444444455555555543

>cd05877 Ig_LP_like Immunoglobulin (Ig)-like domain of human cartilage link protein (LP)

Probab=97.80  E-value=0.00017  Score=61.31  Aligned_cols=73  Identities=16%  Similarity=0.228  Sum_probs=53.5

Q ss_pred             cCCCeEEEEEEccCC------CCeEEEeeCCcc--c----c-C----------CCCceee-----cceEEEEeee--cCC
Q psy8771         119 LDSPLNLSCVAVGSP------MPFVKWRKGQNI--E----L-T----------PDDKLPV-----GRNVLTLDRV--TES  168 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p------~p~i~W~k~~~~--~----~-~----------~~~~~~~-----~~~~l~i~~l--~d~  168 (904)
                      .|++++|.|.....|      ...|.|+|....  .    + .          ...|+..     ++.+|.|.++  +|+
T Consensus         1 ~G~~vtL~C~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~Ds   80 (106)
T cd05877           1 RGGNVTLPCRYHYEPELSAPRKIRVKWTKLESDYLKEEDVLVAIGTRHKSYGSYQGRVFLRRAHDLDASLVITDLRLEDY   80 (106)
T ss_pred             CCCcEEEEeEeECCCcCCCCccceEEEEEecCCCCeeEEEEEEcCcEEEeccCccCcEEecCCCCCcEEEEEccCChHHC
Confidence            489999999988764      357999995211  0    1 0          1134433     2458999999  699


Q ss_pred             eEEEEEEEecCcceEEEEEEEEE
Q psy8771         169 ENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       169 g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|.|.+.+..+..+....|.|.
T Consensus        81 G~Y~C~v~~~~~~~~~~~~l~v~  103 (106)
T cd05877          81 GRYRCEVIDGLEDESVVVALRLR  103 (106)
T ss_pred             EEEEEEEEecccceEEEEEEEEE
Confidence            99999999988888888888876

Ig_LP_like: immunoglobulin (Ig)-like domain similar to that that found in human cartilage link protein (LP). In cartilage, chondroitin-keratan sulfate proteoglycan (CSPG), aggrecan, forms cartilage link protein stabilized aggregates with hyaluronan (HA). These aggregates contribute to the tissue's load bearing properties. Aggregates having other CSPGs substituting for aggrecan may contribute to the structural integrity of many different tissues. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.

>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan

Probab=97.80  E-value=0.00019  Score=60.72  Aligned_cols=73  Identities=21%  Similarity=0.292  Sum_probs=52.0

Q ss_pred             cCCCeEEEEEEccCC------------CCeEEEeeCC-cc---cc-----------CCCCceee-------cceEEEEee
Q psy8771         119 LDSPLNLSCVAVGSP------------MPFVKWRKGQ-NI---EL-----------TPDDKLPV-------GRNVLTLDR  164 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p------------~p~i~W~k~~-~~---~~-----------~~~~~~~~-------~~~~l~i~~  164 (904)
                      .|++++|.|......            .+.|.|+|-. +.   .+           ....|+.+       ++.+|+|.+
T Consensus         1 ~G~~VtLpC~~~~~~~~~~~~~~~~~~~~~I~W~k~~~g~~~~ii~~~~~~~~~~~~f~~R~sl~~~~~~~~~asL~I~n   80 (112)
T cd05900           1 LGSSLLIPCYFQDPIAKDPGAPTVAPLSPRIKWSFISKEKESVLLVATEGKVRVNTEYLDRVSLPNYPAIPSDATLEITE   80 (112)
T ss_pred             CCCcEEEeeEEeCCcCccccccccCCCCCEEEEEEecCCCccEEEEEECCeEEECccccCeEEecccCCCCCCcEEEEee
Confidence            489999999998653            4689999841 11   01           11124443       467999999


Q ss_pred             e--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         165 V--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       165 l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |  +|+|.|.|.+.+..+.......|.|.
T Consensus        81 l~~sDsG~Y~C~V~~g~~~~~~~v~l~v~  109 (112)
T cd05900          81 LRSNDSGTYRCEVMHGIEDNYDTVEVQVK  109 (112)
T ss_pred             cccccCEEEEEEEecCCCCceeEEEEEEE
Confidence            9  79999999999766666677677665

Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.

>cd04983 IgV_TCR_alpha_like Immunoglobulin (Ig) variable (V) domain of T-cell receptor (TCR) alpha chain and similar proteins

Probab=97.79  E-value=0.00012  Score=62.89  Aligned_cols=69  Identities=16%  Similarity=0.283  Sum_probs=51.3

Q ss_pred             CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcc-cc------------CCCCceee------cceEEEEeee--cCC
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI-EL------------TPDDKLPV------GRNVLTLDRV--TES  168 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~-~~------------~~~~~~~~------~~~~l~i~~l--~d~  168 (904)
                      .|.. +.+.+|++++|.|.+.+.+...+.|+|.... ..            ....|+.+      ...+|.|.++  +|+
T Consensus         4 ~~~~-v~~~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~Ds   82 (109)
T cd04983           4 SPQS-LSVQEGENVTLNCNYSTSTFYYLFWYRQYPGQGPQFLIYISSNGEEKEKGRFSATLDKSRKSSSLHISAAQLSDS   82 (109)
T ss_pred             cCCc-eEEcCCCCEEEEEEECCCCccEEEEEEECCCCCeEEEEEEecCCCcccCCcEEEEEcccCCEEEEEECCCCHHHC
Confidence            4455 8999999999999999988889999984211 00            12344433      2458999999  699


Q ss_pred             eEEEEEEEecC
Q psy8771         169 ENYTCIAASVL  179 (904)
Q Consensus       169 g~Y~c~a~n~~  179 (904)
                      |.|.|.+.+..
T Consensus        83 G~Y~C~~~~~~   93 (109)
T cd04983          83 AVYFCALSESG   93 (109)
T ss_pred             EEEEEEEecCC
Confidence            99999998754

IgV_TCR_alpha: immunoglobulin (Ig) variable domain of the alpha chain of alpha/beta T-cell antigen receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are composed of alpha and beta, or gamma and delta, polypeptide chains with variable (V) and constant (C) regions. This group represents the variable domain of the alpha chain of TCRs and also includes the variable domain of delta chains of TCRs. Alpha/beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. The variable domain of TCRs is responsible for antigen recognition, and is located at the N-terminus of the receptor. Gamma/delta TCRs recognize intact protein antigens; they recognize proteins antigens directly and without antigen processing, and MHC independently of the bound peptide.

>smart00060 FN3 Fibronectin type 3 domain

Probab=97.76  E-value=0.00022  Score=57.10  Aligned_cols=76  Identities=32%  Similarity=0.537  Sum_probs=54.0

Q ss_pred             CCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc---cceEEe-cccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771         623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA---KHHRRI-GLVETYSLTGLYPNTLYYIWLAAQSPR  698 (904)
Q Consensus       623 ~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~---~~~~~~-~~~~~~~l~~L~p~t~Y~v~V~a~~~~  698 (904)
                      +|.++.+......++.|+|.++.....  .+|.+.|.......   +..... .....+.+.+|.|++.|.|+|+|++..
T Consensus         3 ~p~~~~~~~~~~~~~~v~W~~~~~~~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~v~v~a~~~~   80 (83)
T smart00060        3 PPSNLRVTDVTSTSVTLSWEPPPDDGI--TGYIVGYRVEYREEGSSWKEVNVTPSSTSYTLTGLKPGTEYEFRVRAVNGA   80 (83)
T ss_pred             CCCcEEEEEEeCCEEEEEECCCCCCCC--CccEEEEEEEEecCCCccEEEEecCCccEEEEeCcCCCCEEEEEEEEEccc
Confidence            456677877778899999997654432  67777776554332   222222 224689999999999999999999975


Q ss_pred             CC
Q psy8771         699 GE  700 (904)
Q Consensus       699 G~  700 (904)
                      |.
T Consensus        81 g~   82 (83)
T smart00060       81 GE   82 (83)
T ss_pred             CC
Confidence            53

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

>cd05879 Ig_P0 Immunoglobulin (Ig)-like domain of Protein zero (P0)

Probab=97.75  E-value=0.00023  Score=60.74  Aligned_cols=67  Identities=13%  Similarity=0.243  Sum_probs=47.8

Q ss_pred             eEEecCCCeEEEEEEccCC----CCeEEEee-CC-------------ccccC-C----CCcee------ecceEEEEeee
Q psy8771         115 LEVMLDSPLNLSCVAVGSP----MPFVKWRK-GQ-------------NIELT-P----DDKLP------VGRNVLTLDRV  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p----~p~i~W~k-~~-------------~~~~~-~----~~~~~------~~~~~l~i~~l  165 (904)
                      +.+..|+.++|.|......    ...|+|.+ ..             |.... .    ..|+.      .++.+|.|.+|
T Consensus         8 v~a~~G~~v~L~C~f~~~~~~~~~~~v~W~~~~~~~~~~~~v~~y~~g~~~~~~~~~f~~Rv~f~g~~~~~daSI~I~nv   87 (116)
T cd05879           8 VYGTVGSDVTLSCSFWSSEWISDDISFTWHYQPDGSRDAISIFHYGKGQPYIDDVGPFKERIEWVGNPSRKDGSIVIHNL   87 (116)
T ss_pred             EEEEcCCcEEEEEEEecCCCCCCcEEEEEEEcCCCCCccEEEEEeCCCceecccccCccCceEEeCCCCcCeeEEEEccC
Confidence            8899999999999998643    35899933 11             22211 1    12443      25678999999


Q ss_pred             --cCCeEEEEEEEecCcc
Q psy8771         166 --TESENYTCIAASVLGV  181 (904)
Q Consensus       166 --~d~g~Y~c~a~n~~g~  181 (904)
                        +|.|.|+|.+.|.-+.
T Consensus        88 ~~sD~G~Y~C~v~n~p~~  105 (116)
T cd05879          88 DYTDNGTFTCDVKNPPDI  105 (116)
T ss_pred             CcccCEEEEEEEEcCCCc
Confidence              7999999999986654

Ig_P0ex: immunoglobulin (Ig) domain of Protein zero (P0). P0 accounts for over 50% of the total protein in peripheral nervous system (PNS) myelin. P0 is a single-pass transmembrane glycoprotein with a highly basic intracellular domain and an Ig domain. The extracellular domain of P0 (P0-ED) is similar to the Ig variable domain, carrying one acceptor sequence for N-linked glycosylation. P0 plays a role in membrane adhesion in the spiral wraps of the myelin sheath. The intracellular domain is thought to mediate membrane apposition of the cytoplasmic faces and may, through electrostatic interactions, interact directly with lipid headgroups. It is thought that homophilic interactions of the P0 extracellular domain mediate membrane juxtaposition in the extracellular space of PNS myelin.

>cd05714 Ig_CSPGs_LP Immunoglobulin (Ig)-like domain of chondroitin sulfate proteoglycans (CSPGs), human cartilage link protein (LP) and similar proteins

Probab=97.74  E-value=0.00021  Score=60.77  Aligned_cols=73  Identities=22%  Similarity=0.383  Sum_probs=53.3

Q ss_pred             cCCCeEEEEEEccCC------CCeEEEeeCC---c-c--ccC-CC----------Cceee-----cceEEEEeee--cCC
Q psy8771         119 LDSPLNLSCVAVGSP------MPFVKWRKGQ---N-I--ELT-PD----------DKLPV-----GRNVLTLDRV--TES  168 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p------~p~i~W~k~~---~-~--~~~-~~----------~~~~~-----~~~~l~i~~l--~d~  168 (904)
                      .|++++|.|.....+      .+.|.|+|..   . .  .+. .+          .|+..     ++.+|.|.++  +|+
T Consensus         1 ~G~~V~L~C~~~~~~~~~~~~~~~i~W~k~~~~~~~~~~v~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~sD~   80 (106)
T cd05714           1 LGGNVTLPCRFHLEPALSAPHGPRIKWTKLESDGAKEVDVLVAIGGRVKVYGSGRVRVPLYPADPGDASLVITDLRLEDS   80 (106)
T ss_pred             CCCCEEEeEEeECCcccCCCCCcEEEEEEeCCCCCceEEEEEEcCCEEEEcCCCceEEEeeCCCCCcceEEECCCCHHHC
Confidence            489999999998764      4689999962   1 1  010 11          12211     4568999999  699


Q ss_pred             eEEEEEEEecCcceEEEEEEEEE
Q psy8771         169 ENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       169 g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|.|.+.+..+.......|.|.
T Consensus        81 G~Y~C~v~~~~~~~~~~v~L~V~  103 (106)
T cd05714          81 GRYRCEVIDGIEDEQDTVELEVR  103 (106)
T ss_pred             EEEEEEEEcCCCceEEEEEEEEE
Confidence            99999999987878888888887

Ig_CSPGs_LP: immunoglobulin (Ig)-like domain similar to that found in chondroitin sulfate proteoglycans (CSPGs) and human cartilage link protein (LP). Included in this group are the CSPGs aggrecan, versican, and neurocan. In CSPGs this Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with hyaluronan (HA). These aggregates contribute to the tissue's load bearing properties. Aggrecan and versican have a wide distribution in connective tissue and extracellular matrices. Neurocan is localized almost exclusively in nervous tissue.

>cd05713 Ig_MOG_like Immunoglobulin (Ig)-like domain of myelin oligodendrocyte glycoprotein (MOG)

Probab=97.74  E-value=0.00025  Score=59.52  Aligned_cols=71  Identities=21%  Similarity=0.220  Sum_probs=48.2

Q ss_pred             CCCeEEEEEEccCCC---CeEEEeeCCcccc----------C------CCCceee-------cceEEEEeee--cCCeEE
Q psy8771         120 DSPLNLSCVAVGSPM---PFVKWRKGQNIEL----------T------PDDKLPV-------GRNVLTLDRV--TESENY  171 (904)
Q Consensus       120 g~~~~l~C~~~g~p~---p~i~W~k~~~~~~----------~------~~~~~~~-------~~~~l~i~~l--~d~g~Y  171 (904)
                      |++++|.|...+...   ..|.|+|.....+          .      ...|+.+       ++.+|.|.+|  +|+|.|
T Consensus         1 G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y   80 (100)
T cd05713           1 GEDAELPCHLSPKMSAEHMEVRWFRSQFSPAVHLYRDGQDQYGEQMPEYRGRTELLKDAIAEGSVALRIHNVRASDEGLY   80 (100)
T ss_pred             CCcEEEEeEEcCCCCCCeeEEEEEECCCceeEEEEcCCcccccccCccccceEEeecccccCCcEEEEEEcCChhhCEEE
Confidence            688999999864322   3578888532111          0      1124432       2358999999  799999


Q ss_pred             EEEEEecCcceEEEEEEEE
Q psy8771         172 TCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       172 ~c~a~n~~g~~~~~~~l~v  190 (904)
                      .|.+.|..+..++...|.|
T Consensus        81 ~C~v~~~~~~~~~~i~l~v   99 (100)
T cd05713          81 TCFFQSDGFYEEATVELKV   99 (100)
T ss_pred             EEEEecCCcEEEEEEEEEE
Confidence            9999998777777776665

Ig_MOG_like: immunoglobulin (Ig)-like domain of myelin oligodendrocyte glycoprotein (MOG). MOG, a minor component of the myelin sheath, is an important CNS-specific autoantigen, linked to the pathogenesis of multiple sclerosis (MS) and experimental autoimmune encephalomyelitis (EAE). It is a transmembrane protein having an extracellular Ig domain. MOG is expressed in the CNS on the outermost lamellae of the myelin sheath, and on the surface of oligodendrocytes, and may participate in the completion, compaction, and/or maintenance of myelin. This group also includes butyrophilin (BTN). BTN is the most abundant protein in bovine milk-fat globule membrane (MFGM).

>cd05741 Ig_CEACAM_D1_like First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) and similar proteins

Probab=97.70  E-value=0.0002  Score=59.19  Aligned_cols=62  Identities=18%  Similarity=0.321  Sum_probs=45.8

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccC-----------------CCCceee-cceEEEEeee--cCCeEEEEEEEecC
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELT-----------------PDDKLPV-GRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-----------------~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      |++|+|.|.........|.|+++......                 ...|+.. .+++|.|.++  +|+|.|+|.+....
T Consensus         1 G~~VtL~c~~~~~~~~~i~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~l~~~DsG~Y~c~v~~~~   80 (92)
T cd05741           1 GESVTLPVSNLPENLQEITWYKGKDKSVEAEIASYIATNSTVFGPAYSGRETIYPNGSLLIQNLTKEDSGTYTLQIISTN   80 (92)
T ss_pred             CCcEEEEcccCCCCCEEEEEECCCCCCcceEEEEEecCCceeECCCcCCeEEEcCCceEEEccCCchhcEEEEEEEEcCC
Confidence            78999999998877778999996322110                 1123333 4689999999  69999999998876


Q ss_pred             cc
Q psy8771         180 GV  181 (904)
Q Consensus       180 g~  181 (904)
                      |.
T Consensus        81 ~~   82 (92)
T cd05741          81 GV   82 (92)
T ss_pred             Cc
Confidence            54

Ig_CEACAM_D1_like : immunoglobulin (IG)-like domain 1 in carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) protein subfamily-like. The CEA family is a group of anchored or secreted glycoproteins, expressed by epithelial cells, leukocytes, endothelial cells and placenta. The CEA family is divided into the CEACAM and pregnancy-specific glycoprotein (PSG) subfamilies. This group represents the CEACAM subfamily. CEACAM1 has many important cellular functions, it is a cell adhesion molecule, and a signaling molecule that regulates the growth of tumor cells, it is an angiogenic factor, and is a receptor for bacterial and viral pathogens, including mouse hepatitis virus (MHV). In mice, four isoforms of CEACAM1 generated by alternative splicing have either two [D1, D4] or four [D1-D4] Ig-like domains on the cell surf

>TIGR00864 PCC polycystin cation channel protein

Probab=97.69  E-value=0.4  Score=61.78  Aligned_cols=288  Identities=15%  Similarity=0.117  Sum_probs=137.4

Q ss_pred             EEEecc-CCceEEEEeCCCCCC--Cc-eecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceE
Q psy8771          41 QVRPLS-SSTMVIQWDEPETPN--GQ-ITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLE  116 (904)
Q Consensus        41 ~~~~~~-~~s~~v~W~~~~~~~--g~-i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~  116 (904)
                      .|...+ .+.+.-.|+=.+...  ++ .+..-..+..|.+++.+.+..+.. .....+.|.+++.    .|...+.. ..
T Consensus      1449 ~Ftd~StGt~~Sy~WdFGDGstst~qnptHtY~~~GtYtVtLTvtN~~Gss-t~T~~VtV~~pV~----~~tinas~-~~ 1522 (2740)
T TIGR00864      1449 LFSAFGRARNASYLWDFGDGGLLEGPEILHAFNSPGDFNIRLAAANEVGKN-EATLNVAVKARVR----GLTINASL-TN 1522 (2740)
T ss_pred             EEeecCCCCceEEEEECCCCCccCccceEEEcCCCceEEEEEEEECCCCce-EEEEEEEEecccc----ceEEcCCC-cc
Confidence            344543 344566676543221  11 222223344566666665555442 3334444433211    12222222 34


Q ss_pred             EecCCCeEEEEEE-ccCCCCeEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEE--EEEecCcceEEEEEEEEEee
Q psy8771         117 VMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTC--IAASVLGVIETSTIVKVQCK  193 (904)
Q Consensus       117 ~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c--~a~n~~g~~~~~~~l~v~~~  193 (904)
                      +..+..+.|.-.. .|. .....|..+++.....      .+ .-.+......|.|++  .|.|..|....+..+.|+. 
T Consensus      1523 vpl~~sV~Fta~~s~Gs-~v~ysWdFGDg~ts~~------~n-pt~~yTY~spGtYtVtLTvtN~~Gs~~~T~~i~V~~- 1593 (2740)
T TIGR00864      1523 VPLNGSVHFEAHLDAGD-DVRFSWILCDHCTPIF------GG-NTIFYTFRSVGTFNIIVTAENDVGAAQASIFLFVLQ- 1593 (2740)
T ss_pred             ccccceEEEEEEccCCC-ceeEEEEeCCCCcccc------CC-CceEEeecCCceEEEEEEEecCCCccceeEEEEEee-
Confidence            4456677777543 344 4468899874432211      11 111222346699986  6889999888887777772 


Q ss_pred             cCCCCCCCCCCcceEEEe------------------ecCCeEEEEEeCCCccceEEEEEEEeCCC-CCCeEEeecceece
Q psy8771         194 YAPLLTLPVAPLDVKISE------------------VTATSVRLDWTYPSETLLYYVIQYKPKAA-NTPYSEISGIITTY  254 (904)
Q Consensus       194 ~~~~~~~P~~p~~l~~~~------------------~~~~sv~l~W~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~  254 (904)
                               +...+++..                  .+..++.+.=....+....|.+.+...+. +....   ......
T Consensus      1594 ---------~I~GlqI~~~~~~gg~~~~~~~~~~~~~t~~~v~l~~~~~~GTnvsysW~~~~~n~~dg~~~---~~tGk~ 1661 (2740)
T TIGR00864      1594 ---------EIEGLQILGETAEGGGGGVQELDGCYFETNHTVQFHAGFKDGTNLSFSWNAILDNEPDGPAF---AGSGKG 1661 (2740)
T ss_pred             ---------cccceEEEeecccccCCcccccccceeccCCEEEeeeccCCCCeeEEEEEEecCCCCCCccc---cccCce
Confidence                     111222211                  11122222211123333344444421111 11111   111123


Q ss_pred             EEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecC----------CCCCCCCCCceEecccCCCeeEEEecCCCCCCce
Q psy8771         255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTG----------ETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ  324 (904)
Q Consensus       255 ~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~----------~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~  324 (904)
                      ..+.-..+| .|.+++.|.|..|....+....+...          .......+..+.+.....+.+..+|.-.++....
T Consensus      1662 ~~vt~~~pG-~Y~VtL~aSN~vG~~t~s~~i~v~epi~~L~L~aS~~~aavn~~V~fs~~lt~GS~vty~W~~gdG~s~~ 1740 (2740)
T TIGR00864      1662 AKLNPLEAG-PCDIFLQAANLLGQATADCTIDFLEPAGNLMLQASDNPAAVNALINLSAELAEGSGLQYRWFLEEGDDLE 1740 (2740)
T ss_pred             eEEecCCCc-eEEEEEEEeecccceeeEEEEEEEEEcCceEEeccCCcccCCCeEEEEEEecCCCCcEEEEEECCCCCcc
Confidence            455556776 79999999999998754433333210          0111223334555445667788888754432110


Q ss_pred             eeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCC
Q psy8771         325 ITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATT  366 (904)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s  366 (904)
                      .         ....+..+ ...-..|.|.+.+.|..|....+
T Consensus      1741 ~---------s~p~~tHt-f~~~G~y~VtVta~N~vss~~~s 1772 (2740)
T TIGR00864      1741 T---------SEPFMSHS-FPSAGLHLVTMKAFNELGSANAS 1772 (2740)
T ss_pred             c---------CCCceEEE-ccCCceEEEEEEEEcccccccee
Confidence            0         00011111 22334799999999999866544

Note: this model has been restricted to the amino half because for technical reasons.

>cd05771 IgC_Tapasin_R Tapasin-R immunoglobulin-like domain

Probab=97.66  E-value=0.00076  Score=60.67  Aligned_cols=105  Identities=17%  Similarity=0.259  Sum_probs=60.9

Q ss_pred             cccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccC-CC-CeEEEeeCCcc
Q psy8771          68 PTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PM-PFVKWRKGQNI  145 (904)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~k~~~~  145 (904)
                      .+...|...+.|..............+.+     ..||.+...+.. .....|+.++|.|.+.|. |. +.|+|++++..
T Consensus         7 ~v~~~D~G~Y~C~~~~~~~~~~~~~~l~v-----~~~P~v~~~~~~-~~~~~~~~~~L~C~a~g~~P~~~~i~W~~~g~~   80 (139)
T cd05771           7 GLTVHDEGTYICSVSTPPHQAQQIIQLSV-----SEPPRVRLSLEK-LVSMIEEPQTLICHIAGYYPLDVQVEWTREPPG   80 (139)
T ss_pred             CCCHHHCEEEEEEEEccCcceeeEEEEEE-----ecCCceEEeCCC-ceeecCCcEEEEEEECCCCCCCeEEEEEECCCC
Confidence            33444545555555433222333444544     467888777765 555689999999999996 54 48999998432


Q ss_pred             cc-----CCCC----ceeecceEEEEeee--------cCCeEEEEEEEec
Q psy8771         146 EL-----TPDD----KLPVGRNVLTLDRV--------TESENYTCIAASV  178 (904)
Q Consensus       146 ~~-----~~~~----~~~~~~~~l~i~~l--------~d~g~Y~c~a~n~  178 (904)
                      ..     ..+.    .....++++.+...        .++..|+|.+.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~g~~ytC~V~H~  130 (139)
T cd05771          81 DSPPPVSLSNVSFSSHRQHQDGTYSLSSHLTLEPGTEDAGATYTCRVSHV  130 (139)
T ss_pred             CccceeccCCeEecceEeCCCCCEEEEEEEEecCCccCCCCEEEEEEEcC
Confidence            11     1111    11123444444321        2467899999753

IgC_Tapasin_R: Immunoglobulin-like domain on Tapasin-R. Tapasin is a V-C1 (variable-constant) immunoglobulin superfamily molecule present in the endoplasmic reticulum (ER), where it links MHC class I molecules to the transporter associated with antigen processing (TAP). Tapasin-R is a tapasin-related protein that contains similar structural motifs to Tapasin, with some marked differences, especially in the V domain, transmembrane and cytoplasmic regions. The majority of Tapasin-R is located within the ER; however, there may be some expression of Tapasin-R at the cell surface. Tapasin-R lacks an obvious ER retention signal.

>cd05899 IgV_TCR_beta Immunoglobulin (Ig) variable (V) domain of T-cell receptor (TCR) bet a chain

Probab=97.63  E-value=0.00023  Score=60.93  Aligned_cols=68  Identities=21%  Similarity=0.333  Sum_probs=49.2

Q ss_pred             CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCc-ccc----------------CCCCceee-----cceEEEEeee--
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN-IEL----------------TPDDKLPV-----GRNVLTLDRV--  165 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~-~~~----------------~~~~~~~~-----~~~~l~i~~l--  165 (904)
                      .|.. +.+.+|++++|.|.+.+ +.+.|.|+|... ..+                ....|+..     ....|.|.++  
T Consensus         4 ~p~~-~~v~~G~~v~l~C~~~~-~~~~v~Wykq~~g~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~~~~   81 (110)
T cd05899           4 SPRY-LIKGRGQSVTLRCSQTS-GHDNMYWYRQDPGKGLQLLFYSNGGSLNEEEGDPKDRFSASRPSLTRSSLTIKSAEP   81 (110)
T ss_pred             CCCc-eEEcCCCcEEEEEEECC-CCCEEEEEEECCCCCcEEEEEEcCCCceEecCccCCceEEECcCCCccEEEECCCCh
Confidence            4445 89999999999999998 778899999522 110                01234432     2357999999  


Q ss_pred             cCCeEEEEEEEecC
Q psy8771         166 TESENYTCIAASVL  179 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~  179 (904)
                      +|+|.|.|.+.+..
T Consensus        82 ~Dsg~Y~Ca~~~~~   95 (110)
T cd05899          82 EDSAVYLCASSLGG   95 (110)
T ss_pred             hhCEEEEEEeeCCC
Confidence            69999999988643

IgV_TCR_beta: immunoglobulin (Ig) variable domain of the beta chain of alpha/beta T-cell antigen receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are composed of alpha and beta, or gamma and delta, polypeptide chains with variable (V) and constant (C) regions. This group includes the variable domain of the alpha chain of alpha/beta TCRs. Alpha/beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. The variable domain of TCRs is responsible for antigen recognition, and is located at the N-terminus of the receptor. Gamma/delta TCRs recognize intact protein antigens; they recognize proteins antigens directly and without antigen processing, and MHC independently of the bound peptide.

>cd05878 Ig_Aggrecan_like Immunoglobulin (Ig)-like domain of the aggrecan-like chondroitin sulfate proteoglycan core protein (CSPG)

Probab=97.61  E-value=0.00052  Score=58.37  Aligned_cols=73  Identities=25%  Similarity=0.425  Sum_probs=53.0

Q ss_pred             cCCCeEEEEEEccCC----------CCeEEEeeCC-ccc---c-----------CCCCceee-------cceEEEEeee-
Q psy8771         119 LDSPLNLSCVAVGSP----------MPFVKWRKGQ-NIE---L-----------TPDDKLPV-------GRNVLTLDRV-  165 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p----------~p~i~W~k~~-~~~---~-----------~~~~~~~~-------~~~~l~i~~l-  165 (904)
                      .|++++|.|.....+          ...|.|+|.. +..   +           ....|+..       ++.+|+|.+| 
T Consensus         1 ~G~~V~LpC~~~~~~~~~~~~~~~~~~~i~W~k~~~~~~~~v~~~~~~~~~~~~~f~gR~~~~~~~~~~~~asL~I~~l~   80 (110)
T cd05878           1 LSSSVLLPCYFTLPPALPPPSNAPESPRIKWTKLSGQKEVTVLVAQDGVVKVGQEYQGRVSLPNYPENRGDASLEISRLR   80 (110)
T ss_pred             CCCCEEEeeEeeCCccccccccCCCCCEEEEEEecCCCcEEEEEEECCEEEecccccCeEEeccCCCCCCcEEEEECCCC
Confidence            389999999998755          2569999842 111   0           01134433       3468999999 


Q ss_pred             -cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         166 -TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       166 -~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                       +|+|.|.|.+....+..+....|.|.
T Consensus        81 ~sD~G~Y~C~v~~~~~~~~~~v~l~V~  107 (110)
T cd05878          81 SSDSGVYRCEVMHGIEDEQDTVPLEVT  107 (110)
T ss_pred             hhhCEEEEEEEEeCCCcceEEEEEEEE
Confidence             69999999999877778888888886

Ig_Aggrecan_like: immunoglobulin (Ig)-like domain of the aggrecan-like chondroitin sulfate proteoglycan core protein (CSPG)s. Included in this group are the Ig domains of other CSPGs: versican, and neurocan. In CSPGs this Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with hyaluronan (HA). These aggregates contribute to the tissue's load bearing properties. Aggrecan and versican have a wide distribution in connective tissue and extracellular matrices. Neurocan is localized almost exclusively in nervous tissue. Aggregates having other CSPGs substi

>cd05718 Ig1_PVR_like First immunoglobulin (Ig) domain of poliovirus receptor (PVR, also known as CD155) and similar proteins

Probab=97.58  E-value=0.00047  Score=57.67  Aligned_cols=70  Identities=19%  Similarity=0.365  Sum_probs=48.8

Q ss_pred             CCeEEEEEEccCC---CCeEEEeeCCcc--------------ccCC--CCceee-----cceEEEEeee--cCCeEEEEE
Q psy8771         121 SPLNLSCVAVGSP---MPFVKWRKGQNI--------------ELTP--DDKLPV-----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       121 ~~~~l~C~~~g~p---~p~i~W~k~~~~--------------~~~~--~~~~~~-----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ++++|.|...+.+   ...|.|+|....              .+..  ..|+..     ++.+|.|.++  +|+|.|.|.
T Consensus         1 ~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~   80 (98)
T cd05718           1 ESVTLECSFPVPGPVQITQVTWMKITGGSKQNIAVFHPQYGISIPPSYEGRVSFLNSSLEDATISISNLRLEDEGNYICE   80 (98)
T ss_pred             CCEEEEeEeeCCCCceEEEEEEeeECCCCCEEEEEEecCCCcccCcCcCceEEEeCCCCCceEEEEccCCcccCEEEEEE
Confidence            4789999998765   347999995321              0111  123322     3568999999  799999999


Q ss_pred             EEe-cCcceEEEEEEEE
Q psy8771         175 AAS-VLGVIETSTIVKV  190 (904)
Q Consensus       175 a~n-~~g~~~~~~~l~v  190 (904)
                      +.+ ..|..+....|.|
T Consensus        81 v~~~~~g~~~~~~~l~V   97 (98)
T cd05718          81 FATFPQGNRQKVTTLTV   97 (98)
T ss_pred             EEeCCCCcEEEEEEEEe
Confidence            875 5677777777766

Ig1_PVR_like: domain similar to the first immunoglobulin (Ig) domain of poliovirus receptor (PVR, also known as CD155). Poliovirus (PV) binds to its cellular receptor (PVR/CD155) to initiate infection. CD155 is a membrane-anchored, single-span glycoprotein; its extracellular region has three Ig-like domains. There are four different isotypes of CD155 (referred to as alpha, beta, gamma, and delta), that result from alternate splicing of the CD155 mRNA, and have identical extracellular domains. CD155-beta and - gamma, are secreted, CD155-alpha and delta are membrane-bound and function as PV receptors. The virus recognition site is contained in the amino-terminal domain, D1. Having the virus attachment site on the receptor distal from the plasma membrane, may be important for successful initiation of infection of cells by the virus. CD155 binds in the poliovirus "c

>KOG3515|consensus

Probab=97.55  E-value=0.0081  Score=67.10  Aligned_cols=166  Identities=13%  Similarity=0.064  Sum_probs=93.9

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCC-CeEEEeeCCccccCCCCc--ee--ecceEEEEeee--cCCeEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPM-PFVKWRKGQNIELTPDDK--LP--VGRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~k~~~~~~~~~~~--~~--~~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ..+|.+.......+...+++.....-.+.|.|. +++.|.+. +..+.....  +.  .+.+.+.+.++  .|+|.|.|+
T Consensus       398 l~~p~~L~~~~~~v~~~e~d~~~~~~~~~~~p~~~~~~w~~~-~~~~~~~~g~~~~v~~~~~~~s~~~v~~~d~g~y~~t  476 (741)
T KOG3515|consen  398 LPSPAFLVRHKTAVVAMEQDHQAAPLPVRGAPAERTFYWTFR-LYKLSQVDGGVVRVGAGAGLGSGVNVSRSDGGSYGLT  476 (741)
T ss_pred             cCCchhhhhcccceeeccCccccccCcccCCCcccchhheec-ceecccccCceEEeeccccccccceeeeccCCcceee
Confidence            445555444333266667777776666778775 68999998 555544322  22  24444556666  699999999


Q ss_pred             EEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE------Eee
Q psy8771         175 AASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS------EIS  248 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~------~~~  248 (904)
                      +.|..|.......+.+.  +    .++.-+.+..+.....+++.........+.+.-.+.+...+.....+      ...
T Consensus       477 atns~gg~~~~~~~~~~--~----sp~~~~~~~~~~~~~~ns~~~~~~q~~~~~~~~m~~~~r~ge~~~~~~~~~~~~~~  550 (741)
T KOG3515|consen  477 ATNSPGGAQAYLLLGVH--T----SPHNHHLQDQVEGATGNSVDGECMQDEQPQDQQMHHEPRSGEPPSDQIDQDAPQQQ  550 (741)
T ss_pred             eccCCCceeeEEeeccc--c----CCcccccccccccCCCCcccceeeccccccchhhhcccccCCCCcccccccccccc
Confidence            99999988777666665  1    12223333344445555655555444333332223332222111111      112


Q ss_pred             cceeceEEEcCCCCCCeEEEEEEEEc
Q psy8771         249 GIITTYYTVRNLSPYTEYEFYIIAVN  274 (904)
Q Consensus       249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n  274 (904)
                      ......+.+.+-.-...|.+.|.+.+
T Consensus       551 ~~~~a~~~~~~~~~~~~~~~~~~~d~  576 (741)
T KOG3515|consen  551 LMAHAQLLVSGNSSLQASETACVVDG  576 (741)
T ss_pred             cCCccceeecccccccccceEEeecC
Confidence            22335567777777777888888766

>PHA02987 Ig domain OX-2-like protein; Provisional

Probab=97.53  E-value=0.0012  Score=59.58  Aligned_cols=77  Identities=16%  Similarity=0.332  Sum_probs=57.3

Q ss_pred             eEEecCCCeEEEEEEc-cCCCCeEEEeeCCccc---------cCC--CCceee-----cceEEEEeee--cCCeEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIE---------LTP--DDKLPV-----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~---------~~~--~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ++|.+|++++|.|... +...+.|+|+|..+..         +.+  .+|+..     .+..|+|.++  +|+|.|.|..
T Consensus        25 v~V~ege~VtLsCs~t~s~~~~qVtWkK~~~~IatY~~~g~~i~~~Fk~Rve~mS~s~~~StItIknVt~sDeGcY~C~F  104 (189)
T PHA02987         25 ITVSEHVNVKISCNKTSSFNSILITWKKNNKTIAGYGPCGPVIVDKFKNKIEYLSKSFNESTILIKNVSLKDNGCYTCIF  104 (189)
T ss_pred             EEEcCCCCEEEEEecCCCCccceEEEEEcCCCEEEEecCCcEEChhhcCeEEEeccCCCcceEEEEeCChhhCeEEEEEE
Confidence            8889999999999985 7677889999962211         111  135543     5678999999  7999999965


Q ss_pred             Ee-cCc-ceEEEEEEEEE
Q psy8771         176 AS-VLG-VIETSTIVKVQ  191 (904)
Q Consensus       176 ~n-~~g-~~~~~~~l~v~  191 (904)
                      .- ..| ..+..+.|.|.
T Consensus       105 ~tfp~G~~~~gt~CLtVt  122 (189)
T PHA02987        105 NTLLSKNNEKGVVCLNVT  122 (189)
T ss_pred             EecCCCCCceeEEEEEEE
Confidence            43 445 67788888887

>cd00099 IgV Immunoglobulin variable domain (IgV)

Probab=97.50  E-value=0.00039  Score=59.15  Aligned_cols=66  Identities=23%  Similarity=0.372  Sum_probs=48.1

Q ss_pred             eEEecCCCeEEEEEEccC-CCCeEEEeeCCccc----c------------CCCCceee------cceEEEEeee--cCCe
Q psy8771         115 LEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIE----L------------TPDDKLPV------GRNVLTLDRV--TESE  169 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~----~------------~~~~~~~~------~~~~l~i~~l--~d~g  169 (904)
                      +++.+|+.++|.|.+.+. +...+.|+|.....    +            ....|+..      ...+|.|.++  +|+|
T Consensus         1 ~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~G   80 (105)
T cd00099           1 LSVSEGESVTLSCTYSGSFSSYYIFWYRQKPGKGPELLIYISSNGSQYAGGVKGRFSGTRDSSKSSFTLTISSLQPEDSA   80 (105)
T ss_pred             CeecCCCCEEEEEEEeCCcCcceEEEEEECCCCCCEEEEEEeCCCCccCccCCCcEEEEEeccCCEEEEEECCCCHHHCE
Confidence            357899999999999987 67789999852210    1            11234432      2448999999  6999


Q ss_pred             EEEEEEEecCc
Q psy8771         170 NYTCIAASVLG  180 (904)
Q Consensus       170 ~Y~c~a~n~~g  180 (904)
                      .|.|.+.+..+
T Consensus        81 ~Y~C~v~~~~~   91 (105)
T cd00099          81 VYYCAVSLSGG   91 (105)
T ss_pred             EEEEEEecCCC
Confidence            99999987665

IgV: Immunoglobulin variable domain (IgV). Members of the IgV family are components of immunoglobulin (Ig) and T cell receptors. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. In Ig, each chain is composed of one variable domain (IgV) and one or more constant domains (IgC); these names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. Within the variable domain, there are regions of even more variability called the hypervariable or complementarity-determining regions (CDRs) which are responsible for antigen binding. A predominant feature of most Ig domains is the disulfide bridge connecting 2 beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd04980 IgV_L_kappa Immunoglobulin (Ig) light chain, kappa type, variable (V) domain

Probab=97.49  E-value=0.00054  Score=58.21  Aligned_cols=70  Identities=21%  Similarity=0.369  Sum_probs=49.1

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCc-cc---cC---------CCCceee----cceEEEEeee--cC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQN-IE---LT---------PDDKLPV----GRNVLTLDRV--TE  167 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~-~~---~~---------~~~~~~~----~~~~l~i~~l--~d  167 (904)
                      ...|.. +.+.+|++++|.|.+.+.. ...+.|+|... ..   +.         ...|+..    ....|.|.++  +|
T Consensus         4 ~Q~p~~-~~v~~G~~v~L~C~~~~~~~~~~~~Wyrq~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~~~~~D   82 (106)
T cd04980           4 TQSPAT-LSVSPGESATISCKASQSVSSNYLAWYQQKPGQAPKLLIYGASTLASGTPSRFSGSGSGTDFTLTISRVEPED   82 (106)
T ss_pred             EECCCc-EEECCCCCEEEEEEECCCCCCCcEEEEEECCCCCcEEEEECccccCCCCCCCEEEeccCCEEEEEECCCChHH
Confidence            344555 8999999999999998876 56799998421 11   00         1124443    2347999999  69


Q ss_pred             CeEEEEEEEec
Q psy8771         168 SENYTCIAASV  178 (904)
Q Consensus       168 ~g~Y~c~a~n~  178 (904)
                      +|.|.|.+.+.
T Consensus        83 sg~Y~Ca~~~~   93 (106)
T cd04980          83 AAVYYCQQYGT   93 (106)
T ss_pred             CEEEEEEEeCC
Confidence            99999998653

IgV_L_kappa: Immunoglobulin (Ig) light chain, kappa type, variable (V) domain. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. In Ig, each chain is composed of one variable domain (IgV) and one or more constant domains (IgC); these names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. There are five types of heavy chains (alpha, gamma, delta, epsilon, and mu), which determine the type of immunoglobulin: IgA, IgG, IgD, IgE, and IgM, respectively. In higher vertebrates, there are two types of light chain, designated kappa and lambda, which seem to be functionally identical, and can associate with any of the heavy chains.

>cd05880 Ig_EVA1 Immunoglobulin (Ig)-like domain of epithelial V-like antigen 1 (EVA)

Probab=97.45  E-value=0.00092  Score=57.48  Aligned_cols=67  Identities=19%  Similarity=0.370  Sum_probs=46.2

Q ss_pred             eEEecCCCeEEEEEEccCC----CCeEEEee---CCccc--c---C------CC----Cceee------cceEEEEeee-
Q psy8771         115 LEVMLDSPLNLSCVAVGSP----MPFVKWRK---GQNIE--L---T------PD----DKLPV------GRNVLTLDRV-  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p----~p~i~W~k---~~~~~--~---~------~~----~~~~~------~~~~l~i~~l-  165 (904)
                      +.+.+|++++|.|.....+    ...|.|++   +++..  +   .      ..    .|+..      ++.+|.|.++ 
T Consensus         8 v~~~~G~~v~L~C~~s~~~~~~~~~~i~W~~~~~~~~~~~~v~~~~~~~~~~~~~~f~~R~~~~~~~~~~~~sL~I~~v~   87 (115)
T cd05880           8 VEAVNGTDVRLKCTFSSSAPIGDTLVITWNFRPLDGGREESVFYYHKRPYPPPDGRFKGRVVWDGNIMRRDASILIWQLQ   87 (115)
T ss_pred             EEEEcCCCEEEEEEEEeCCCCCCcEEEEEEEECCCCCceeEEEEECCCccccCcccccCeEEEecCCcCCceEEEEeeCC
Confidence            8999999999999987544    23699974   11211  1   0      11    12221      3568999999 


Q ss_pred             -cCCeEEEEEEEecCcc
Q psy8771         166 -TESENYTCIAASVLGV  181 (904)
Q Consensus       166 -~d~g~Y~c~a~n~~g~  181 (904)
                       +|+|.|.|.+.|..+.
T Consensus        88 ~~D~G~Y~C~v~~~~~~  104 (115)
T cd05880          88 PTDNGTYTCQVKNPPDV  104 (115)
T ss_pred             hhhCEEEEEEEEeCCCC
Confidence             6999999999986654

Ig_EVA: immunoglobulin (Ig) domain of epithelial V-like antigen 1 (EVA). EVA is also known as myelin protein zero-like 2. EVA is an adhesion molecule, which may play a role in structural organization of the thymus and early lymphocyte development.

>cd05886 Ig1_Nectin-1_like First immunoglobulin (Ig) domain of nectin-1 (also known as poliovirus receptor related protein 1, or as CD111) and similar proteins

Probab=97.40  E-value=0.0017  Score=53.64  Aligned_cols=69  Identities=20%  Similarity=0.373  Sum_probs=48.1

Q ss_pred             CeEEEEEEccC-CCC---eEEEeeCC--cc-cc---C----------CCCceee-----cceEEEEeee--cCCeEEEEE
Q psy8771         122 PLNLSCVAVGS-PMP---FVKWRKGQ--NI-EL---T----------PDDKLPV-----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       122 ~~~l~C~~~g~-p~p---~i~W~k~~--~~-~~---~----------~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      +++|.|..... |..   .|+|.|-.  +. .+   .          ...|+..     ++.+|.|.+|  +|.|.|+|.
T Consensus         2 ~v~L~C~f~~~~~~~~~~~V~W~k~~~~~~~~va~y~~~~g~~~~~~f~~Rv~f~~~~~~daSi~i~nl~~~D~G~Y~C~   81 (99)
T cd05886           2 DVVLHCSFINPLPPVKITQVTWQKLTNGSKQNVAIYNPSMGVSVLPPYRERVTFKNPSFEDGTISLSRLELEDEGVYICE   81 (99)
T ss_pred             cEEEEeEeecCCCCCCeEEEEEEECCCCCceEEEEECCcCCcccCccccCcEEEcCCCCCcceEEEcCCccccCEEEEEE
Confidence            68999998843 222   58999831  11 11   0          1133332     3589999999  799999999


Q ss_pred             EEe-cCcceEEEEEEEE
Q psy8771         175 AAS-VLGVIETSTIVKV  190 (904)
Q Consensus       175 a~n-~~g~~~~~~~l~v  190 (904)
                      +.+ ..|..++.+.|.|
T Consensus        82 v~t~P~g~~~~~~~L~V   98 (99)
T cd05886          82 FATFPTGNRESQLNLTV   98 (99)
T ss_pred             EEeCCCCCeEEEEEEEE
Confidence            999 6788888888876

Ig1_Nectin-1_like: domain similar to the first immunoglobulin (Ig) domain of nectin-1 (also known as poliovirus receptor related protein 1, or as CD111). Nectin-1 belongs to the nectin family comprised of four transmembrane glycoproteins (nectins-1 through -4). Nectins are synaptic cell adhesion molecules (CAMs) which facilitate adhesion and signaling at various intracellular junctions. Nectins form homophilic cis-dimers, followed by homophilic and heterophilic trans-dimers involved in cell-cell adhesion. In addition nectins heterophilically trans-interact with other CAMs such as nectin-like molecules (Necls), nectin-1 for example, has been shown to trans-interact with Necl-1. Nectins also interact with various other proteins, including the actin filament (F-actin)-binding protein, afadin. Mutation in the human nectin-1 gene is

>cd04982 IgV_TCR_gamma Immunoglobulin (Ig) variable (V) domain of T-cell receptor (TCR) gamma chain

Probab=97.40  E-value=0.00078  Score=58.42  Aligned_cols=63  Identities=17%  Similarity=0.430  Sum_probs=46.4

Q ss_pred             eEEecCCCeEEEEEEcc--CCCCeEEEeeCC--ccc---c--C-----------CCCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVG--SPMPFVKWRKGQ--NIE---L--T-----------PDDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g--~p~p~i~W~k~~--~~~---~--~-----------~~~~~~~------~~~~l~i~~l--~  166 (904)
                      +.+.+|+.++|.|.+.+  .+.+.+.|+|..  ..+   +  .           ...|+.+      ....|.|.++  +
T Consensus         8 ~~~~~G~~v~l~C~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~   87 (116)
T cd04982           8 ITREESKSVTISCKVSGIDFSTTYIHWYRQKPGQALERLLYVSSTSTQRKLSGGTKNKFEARKDVGKSTSTLTIQNLEKE   87 (116)
T ss_pred             EEeCCCCCEEEEEEEeCCCccccEEEEEEECCCCCCEEEEEEecCCCcEEeCcccCCCEEEEEECCCCEEEEEEEECCHH
Confidence            88899999999999988  677889999942  111   0  0           1234443      2347999999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |+|.|.|.+..
T Consensus        88 Dsg~Y~C~~~~   98 (116)
T cd04982          88 DSATYYCAYWE   98 (116)
T ss_pred             HCEEEEEEEec
Confidence            99999998864

IgV_TCR_gamma: immunoglobulin (Ig) variable (V) domain of the gamma chain of gamma/delta T-cell receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are heterodimers consisting of alpha and beta chains or gamma and delta chains. Each chain contains a variable (V) and a constant (C) region. The majority of T cells contain alpha/beta TCRs but a small subset contain gamma/delta TCRs. Alpha/beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. Gamma/delta TCRs recognize intact protein antigens; they recognize protein antigens directly and without antigen processing, and MHC independently of the bound peptide. Gamma/delta T cells can also be stimulated by non-peptide antigens such as small phosphate- or amine-containing compounds. The variable domain of gamma/delta TCRs is responsible for antigen recognition and is

>cd05883 Ig2_Necl-2 Second immunoglobulin (Ig)-like domain of nectin-like molecule 2 (also known as cell adhesion molecule 1 (CADM1))

Probab=97.39  E-value=0.0016  Score=51.02  Aligned_cols=68  Identities=25%  Similarity=0.448  Sum_probs=43.5

Q ss_pred             eEEEEEEcc-CCCCeEEEeeCCccccCCCCce--eec-----ceEEEEeee--cCCeEEEEEEEecCc-ceEEEEEEEEE
Q psy8771         123 LNLSCVAVG-SPMPFVKWRKGQNIELTPDDKL--PVG-----RNVLTLDRV--TESENYTCIAASVLG-VIETSTIVKVQ  191 (904)
Q Consensus       123 ~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~~~--~~~-----~~~l~i~~l--~d~g~Y~c~a~n~~g-~~~~~~~l~v~  191 (904)
                      +.|.|.+.| .|.+.|+|+|+ +.++......  ...     ..+|.|.--  .|+..|+|+|.|..- ..+.+..|.|.
T Consensus         2 ~~L~C~s~gSkP~A~I~W~k~-~~~l~~~~~~~~~~~~~~t~~S~L~~~p~~eDdG~~~~C~a~~~~l~~~~~~~~L~V~   80 (82)
T cd05883           2 IELNCTAMASKPAATIRWFKG-NKELTGKSTVEETWSRMFTVTSQLMLKVTKEDDGVPVICLVDHPAVKDLQTQRYLEVQ   80 (82)
T ss_pred             EEEEEEecCCCCCCEEEEEEC-CEECcCcccceeccCCCcEEEEEEEEECchhhCCCEEEEEEcCcccCCceeeEEEEEE
Confidence            689999997 58889999999 7777554221  111     123444322  477889999988542 24555555554

Ig2_Necl-2: second immunoglobulin (Ig)-like domain of nectin-like molecule 2 (also known as cell adhesion molecule 1 (CADM1)). Nectin-like molecules (Necls) have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. Necl-2 has Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-1 is expressed in a wide variety of tissues, and is a putative tumour suppressor gene, which is downregulated in aggressive neuroblastoma. Ig domains are likely to participate in ligand binding and recognition.

>cd05887 Ig1_Nectin-3_like First immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3) and similar proteins

Probab=97.37  E-value=0.0017  Score=53.02  Aligned_cols=70  Identities=23%  Similarity=0.332  Sum_probs=49.5

Q ss_pred             CCeEEEEEEccCCC-CeEEEeeCCcc---cc-------------CCCCceee-----cceEEEEeee--cCCeEEEEEE-
Q psy8771         121 SPLNLSCVAVGSPM-PFVKWRKGQNI---EL-------------TPDDKLPV-----GRNVLTLDRV--TESENYTCIA-  175 (904)
Q Consensus       121 ~~~~l~C~~~g~p~-p~i~W~k~~~~---~~-------------~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a-  175 (904)
                      ++++|.|.....+. ..|+|.|-.+.   .+             ....|+..     .+.+|.|.++  +|+|.|+|.+ 
T Consensus         1 ~~vtL~C~~~~~~~~~qV~W~k~~~~~~~~ia~y~~~~g~~~~~~y~~Rv~~~~~~~~d~sl~i~nv~~~D~G~Y~C~v~   80 (96)
T cd05887           1 KNVTLKCRIQVNETITQSSWEKIHGKGSVTLAVHHPMYGISIQPDYQGRVSFKNYSLLDATIMLENVGFSDIGVYICKAV   80 (96)
T ss_pred             CCEEEEEEecCCCcEEEEEEEEcCCCCcEEEEEEcccCCcccChhhCCcEEEcCCCCCccEEEEeCCCccccEEEEEEEE
Confidence            46899999886543 47899984221   11             11134443     3779999999  7999999986 


Q ss_pred             EecCcceEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKV  190 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v  190 (904)
                      ....|..+++..|.|
T Consensus        81 tfP~G~~~~~~~l~~   95 (96)
T cd05887          81 TFPLGNTQSSTTVTV   95 (96)
T ss_pred             eCCCCCeeEEEEEEE
Confidence            557788888888876

Ig1_Nectin-3_like: domain similar to the first immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3). Nectin-3 belongs to the nectin family comprised of four transmembrane glycoproteins (nectins-1 through -4). Nectins are synaptic cell adhesion molecules (CAMs) which participate in adhesion and signaling at various intracellular junctions. Nectins form homophilic cis-dimers, followed by homophilic and heterophilic trans-dimers involved in cell-cell adhesion. For example, during spermatid development, the nectin-3,-2 trans-interaction is required for the formation of Sertoli cell-spermatid junctions in testis, and during morphogenesis of the ciliary body, the nectin-3,-1 trans-interaction is important for apex-apex adhesion between the pigment and non-pigment layers of the ciliary epithelia. Nectins also

>cd05775 Ig_SLAM-CD84_like_N N-terminal immunoglobulin (Ig)-like domain of the signaling lymphocyte activation molecule (SLAM) family, CD84_like

Probab=97.37  E-value=0.0005  Score=57.04  Aligned_cols=73  Identities=10%  Similarity=0.274  Sum_probs=49.3

Q ss_pred             ecCCCeEEEEEEcc-CCCCeEEEeeCCccccCC----------------CCceee--cceEEEEeee--cCCeEEEEEEE
Q psy8771         118 MLDSPLNLSCVAVG-SPMPFVKWRKGQNIELTP----------------DDKLPV--GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       118 ~~g~~~~l~C~~~g-~p~p~i~W~k~~~~~~~~----------------~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ..|++|+|.|.... .....|.|+|.....+..                ..|+.+  ++.+|.|.++  +|+|.|.|.+.
T Consensus         2 ~~G~sVtL~c~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~f~~R~~~~~~~~sL~I~~~~~~DsG~Y~c~v~   81 (97)
T cd05775           2 ILGGSVTLPLNIPDGTEIESITWSFNTSLAIITPGEETAPEIIVTDPSYKERVNFSQNDYSLQISNLKMEDAGSYRAEIN   81 (97)
T ss_pred             ccCCeEEEeCCCCCCcEEEEEEEecCCEeEEEecCCCCCCccEEeCCCceeeEEecCCceeEEECCCchHHCEEEEEEEE
Confidence            47999999998865 555679999863211100                123333  3579999999  69999999998


Q ss_pred             ecCcce-EEEEEEEE
Q psy8771         177 SVLGVI-ETSTIVKV  190 (904)
Q Consensus       177 n~~g~~-~~~~~l~v  190 (904)
                      +..|.. .....|.|
T Consensus        82 ~~~~~~~~~~f~L~v   96 (97)
T cd05775          82 TKNGVTITKEFTLHI   96 (97)
T ss_pred             cCCCCeEEEEEEEEe
Confidence            877653 34444443

Ig_SLAM-CD84_like_N: The N-terminal immunoglobulin (Ig)-like domain of the signaling lymphocyte activation molecule (SLAM) family, CD84_like. The SLAM family is a group of immune-cell specific receptors that can regulate both adaptive and innate immune responses. Members of this group include proteins such as CD84, SLAM (CD150), Ly-9 (CD229), NTB-A (ly-108, SLAM6), 19A (CRACC), and SLAMF9. The genes coding for the SLAM family are nested on chromosome 1, in humans at 1q23, and in mice at 1H2. The SLAM family is a subset of the CD2 family, which also includes CD2 and CD58 located on chromosome 1 at 1p13 in humans. In mice, CD2 is located on chromosome 3, and there is no CD58 homolog. The SLAM family proteins are organized as an extracellular domain with either two or four Ig-like domains, a single transmembrane segment, and a cytoplasmic region

>cd05715 Ig_P0-like Immunoglobulin (Ig)-like domain of Protein zero (P0) and similar proteins

Probab=97.33  E-value=0.0019  Score=55.89  Aligned_cols=67  Identities=18%  Similarity=0.292  Sum_probs=45.7

Q ss_pred             eEEecCCCeEEEEEEccCC----CCeEEEeeCCc--c---c-c--------C-CC----Cceee------cceEEEEeee
Q psy8771         115 LEVMLDSPLNLSCVAVGSP----MPFVKWRKGQN--I---E-L--------T-PD----DKLPV------GRNVLTLDRV  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p----~p~i~W~k~~~--~---~-~--------~-~~----~~~~~------~~~~l~i~~l  165 (904)
                      +.+.+|++++|.|......    ...|.|++...  .   . +        . ..    .|+..      ++.+|+|.++
T Consensus         8 v~v~~G~~vtL~C~~s~~~~~~~~~~v~W~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v   87 (116)
T cd05715           8 VYAVNGSDVRLKCTFSSSEPISDDISVTWSFQPEGSGDTESIFHYHKGPYYPLKDGRFKDRVEWVGNPSRKDASIVIHNL   87 (116)
T ss_pred             EEEEcCCCeEEEeEEeCCCCcCCceEEEEEEecCCCCCcEEEEEEcCCccccccCccccCcEEEecCCcCCeeEEEEeeC
Confidence            8899999999999987543    24699986311  0   0 0        0 11    12222      2467999999


Q ss_pred             --cCCeEEEEEEEecCcc
Q psy8771         166 --TESENYTCIAASVLGV  181 (904)
Q Consensus       166 --~d~g~Y~c~a~n~~g~  181 (904)
                        +|+|.|.|.+.|.-+.
T Consensus        88 ~~~D~G~Y~C~v~~~~~~  105 (116)
T cd05715          88 QFTDNGTYTCDVKNPPDI  105 (116)
T ss_pred             CcccCEEEEEEEEeCCCC
Confidence              7999999999986553

Ig_P0ex-like: domain similar to the immunoglobulin (Ig) domain of Protein zero (P0). P0 accounts for over 50% of the total protein in peripheral nervous system (PNS) myelin. P0 is a single-pass transmembrane glycoprotein with a highly basic intracellular domain and an extracellular Ig domain. The extracellular domain of P0 (P0-ED) is similar to the Ig variable domain, carrying one acceptor sequence for N-linked glycosylation. P0 plays a role in membrane adhesion in the spiral wraps of the myelin sheath. The intracellular domain is thought to mediate membrane apposition of the cytoplasmic faces and may, through electrostatic interactions, interact directly with lipid headgroups. It is thought that homophilic interactions of the P0 extracellular domain mediate membrane juxtaposition in the extracellular space of PNS myelin. This group also contains the Ig domain of Sodium channel subunit beta-2

>KOG4367|consensus

Probab=97.31  E-value=0.00019  Score=71.52  Aligned_cols=81  Identities=20%  Similarity=0.270  Sum_probs=73.7

Q ss_pred             ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEec
Q psy8771         633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK  712 (904)
Q Consensus       633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~  712 (904)
                      -.++++|+|..|.....+.++|.++....+++.......+..+-+++.||..++.|.-+|.|+|..|.++.|..+...|.
T Consensus       451 ~nns~t~~wkqp~~~~~~~dg~~leld~g~~g~frevy~g~etmctvdglhfns~y~arvka~n~tg~s~ys~tl~lqts  530 (699)
T KOG4367|consen  451 HNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTS  530 (699)
T ss_pred             cCCceEEEeecCCCCCCCCcceEEEeecCCCCceeEEEecCceeEEecceecchhHHHHHHHhhccCCCcccceeEeeec
Confidence            35789999998888888999999999999888888899999999999999999999999999999999999988877775


Q ss_pred             C
Q psy8771         713 Q  713 (904)
Q Consensus       713 ~  713 (904)
                      +
T Consensus       531 ~  531 (699)
T KOG4367|consen  531 E  531 (699)
T ss_pred             c
Confidence            4

>cd05888 Ig1_Nectin-4_like Frst immunoglobulin (Ig) domain of nectin-4 (also known as poliovirus receptor related protein 4, or as LNIR receptor) and similar proteins

Probab=97.27  E-value=0.0019  Score=53.99  Aligned_cols=69  Identities=19%  Similarity=0.314  Sum_probs=47.6

Q ss_pred             CeEEEEEEccCC---CCeEEEeeCCcc------c-cC----------CCCceee------cceEEEEeee--cCCeEEEE
Q psy8771         122 PLNLSCVAVGSP---MPFVKWRKGQNI------E-LT----------PDDKLPV------GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       122 ~~~l~C~~~g~p---~p~i~W~k~~~~------~-~~----------~~~~~~~------~~~~l~i~~l--~d~g~Y~c  173 (904)
                      +++|.|.....+   ...|.|+|....      . +.          ...|...      ++.+|.|.++  +|+|.|.|
T Consensus         2 ~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~Rv~f~~~~~~~~~sL~I~nv~~sD~GtY~C   81 (100)
T cd05888           2 DTRLPCRYNVSDGETVVQVLWIRENAGGVEEEIALLHFKYGQTEFHAYEGRVRFETPNPIADGALILRNAVQADEGKYKC   81 (100)
T ss_pred             CEEEEeEEecCCCCcEEEEEEEEccCCCCcEEEEEEeccCCcccCCCccCcEEEeCCCCCCceEEEEecCccccceEEEE
Confidence            689999987554   347899994211      0 00          0123332      3668999999  79999999


Q ss_pred             EEEe-cCcceEEEEEEEE
Q psy8771         174 IAAS-VLGVIETSTIVKV  190 (904)
Q Consensus       174 ~a~n-~~g~~~~~~~l~v  190 (904)
                      .+.+ ..|..++.+.|.|
T Consensus        82 ~v~~~p~g~~~~~~~L~V   99 (100)
T cd05888          82 RVITFPAGNFEAELVLTV   99 (100)
T ss_pred             EEEeCCCCCeeeEEEEEe
Confidence            9987 6677777777776

Ig1_Nectin-4_like: domain similar to the first immunoglobulin (Ig) domain of nectin-4 (also known as poliovirus receptor related protein 4, or as LNIR receptor). Nectin-4 belongs to the nectin family, which is comprised of four transmembrane glycoproteins (nectins-1 through -4). Nectins are synaptic cell adhesion molecules (CAMs) which participate in adhesion and signaling at various intracellular junctions. Nectins form homophilic cis-dimers, followed by homophilic and heterophilic trans-dimers involved in cell-cell adhesion. For example nectin-4 trans-interacts with nectin-1. Nectin-4 has also been shown to interact with the actin filament-binding protein, afadin. Unlike the other nectins, which are widely expressed in adult tissues, nectin-4 is mainly expressed during embryogenesis, and is not detected in normal adult

>KOG0613|consensus

Probab=97.24  E-value=0.067  Score=62.82  Aligned_cols=380  Identities=13%  Similarity=0.103  Sum_probs=176.9

Q ss_pred             EEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCC-CceeeEEEEEEeCCCCCCcceE
Q psy8771         453 YYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN-GQITGYKVYYTQDQSLPMSAWE  531 (904)
Q Consensus       453 Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~~~  531 (904)
                      |.++++++...|+...-....+.-....|...|............+.+.|..+..+. ..+.+|.++....-+.  ..|.
T Consensus       204 ~e~~v~~v~s~gqp~~~~~~~~~g~~i~~~~~~~~s~t~e~s~~~i~~~l~~~~G~~~~~~~~~l~e~~~~~~~--~t~~  281 (1205)
T KOG0613|consen  204 YESRVRAVVSAGQPEPLERWEILGELIAPGSAPSMSVTLEASDRKIQLTLRAPRGPYSAHILGYLIEQRKHKGG--NTKT  281 (1205)
T ss_pred             cceeEEEEEecCCCccchhhhhcccccCCCCccccccccchhheeeeEEeecCCCchHHHHhcchhhhcccCCC--cccc
Confidence            566666666666544322222222222333344322223334446777777644221 1455666655542111  2222


Q ss_pred             EEee--cCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcE---EEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCC
Q psy8771         532 TQVV--DNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPV---LVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTH  605 (904)
Q Consensus       532 ~~~~--~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~---~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~  605 (904)
                      ....  ....+++...-.++..|.+++...-..|.+.+-...   .+..... .+..+..+.+.......+.+.|.....
T Consensus       282 i~~~~~~~~~s~t~~~~~~~~q~~~~v~~~~~i~~~~~~p~~~~~aaa~~~~~~v~~~~~~~v~a~d~~~v~m~~~~~~~  361 (1205)
T KOG0613|consen  282 IQNDGPEPELSWTVADKRQGCQDRFKVTEEAPIGKGKPGPESLQAAAARPPEVPVGLVRNLSVTARDNTLVEMPTALSGT  361 (1205)
T ss_pred             ccccCCccccceeeecccCCcccceeeeEEeeccccccCchhhhhhccCCccccccccccceeccccCcceeecccccCC
Confidence            2222  334445555556777888888887776655433222   2222111 223445566666666777777766532


Q ss_pred             CCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCC
Q psy8771         606 SGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLY  683 (904)
Q Consensus       606 ~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~  683 (904)
                      .                                        -...+.+|.+.-....+..+  ..........+.+.++.
T Consensus       362 ~----------------------------------------~p~~~~~~~~~~~~~~~~~~~~~~~~~~ts~~~~~~~~~  401 (1205)
T KOG0613|consen  362 Q----------------------------------------KPDEAQGYHGEEVSSESLGALPCPVGTVTSHTYTIKDAG  401 (1205)
T ss_pred             c----------------------------------------CCchheeecccccccccccccccccccccCcchhhhhcC
Confidence            0                                        12224455544443333322  22223345678889999


Q ss_pred             CCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCC------CEEEEEecCCCCCCCCccEEEEEEEEE
Q psy8771         684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSS------TSIRISWEPPPVERSNGHIVYYKLQFV  757 (904)
Q Consensus       684 p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~------~~v~l~W~~~~~~~~~g~~~~Y~v~~~  757 (904)
                      ++..|..++.|.|..|.........+.-.  .+...|..+.......      ..+.+.-..+.    +    .+-+...
T Consensus       402 ~~e~~~~~~~a~n~~g~~~~~~~~~vs~~--~~gt~~~~~kk~~~~t~~L~~~~~i~~~~~~~s----~----~~~~~~~  471 (1205)
T KOG0613|consen  402 PGEGYFTRVPAVNKGGTEQTIAESTVSEE--MPGTQPPKFKKDVSTTDLLTVKDEITVRTPDSS----T----SMPMTTV  471 (1205)
T ss_pred             cccccccccceeccCCcccccchhhcccc--cCCCCCccccccccccccccCCcccccccCCCC----c----cccceeE
Confidence            99999999999999987654432222111  1222222222211111      22223222221    0    0001111


Q ss_pred             Ec-c-CCCCccEEEEec----CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEE-eecCCCCCCC-CccCC------
Q psy8771         758 ET-G-RSDSEASIVTLK----NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPIT-IRTHEDDPSE-VCPTQ------  823 (904)
Q Consensus       758 ~~-~-~~~~~~~~~~~~----~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~-~~t~~~~P~~-v~~~~------  823 (904)
                      .. . ..........+.    ...-..+.++..+..|.+..+-.+..+.  .+.... .-....+|+. ++.-+      
T Consensus       472 tt~~~~~~~s~~s~~l~r~~~tslLlk~~~~~~~A~~~~a~~~~~~k~~--~~~~~~l~~~~s~a~~~~~~~~~~~g~p~  549 (1205)
T KOG0613|consen  472 TTIKDGLPLSDRSVTLTRDVLTSLLLKVASLSDGAQYTRALRTLQGKPV--PSLDRKLPAAKSSAPKPIHTQENQPGTPT  549 (1205)
T ss_pred             eeccCCcccccccccccccchhhheeeccCCCccchhhhhhhccCCCCC--CcccccccccccCCcccccccccCCCCcc
Confidence            10 0 000001111111    5556667888888888777665543322  111111 1111111211 11100      


Q ss_pred             cceeeCCCCCceee-eeeee--cCCceEEecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCCCCCC
Q psy8771         824 NDFRKNKKTNGSNF-KGGYL--NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSK  886 (904)
Q Consensus       824 ~~W~~p~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~  886 (904)
                      +.|..-....+.+. .+...  ..+.+........+...+.++.|+..|.+++.+.+..|.+..+.
T Consensus       550 l~~~~~~~E~~~vs~~~~~a~~qlg~~~~~~~r~gtt~t~~~~~p~~~~~~t~~~k~~~gE~~ps~  615 (1205)
T KOG0613|consen  550 LEWEPKPAEASKVSLHYASATRQLGVWRVPESRPGTTETIGSILPGHEYHVTIKAKNELGESRPSS  615 (1205)
T ss_pred             cccCCCcccccccchhhhhhhhhccCCcccccCCCcccccccccccccceeehhhhhcccccCCCC
Confidence            13432111111111 00000  00111111233338899999999999999999999999988773

>KOG4367|consensus

Probab=97.18  E-value=0.00048  Score=68.76  Aligned_cols=82  Identities=20%  Similarity=0.435  Sum_probs=70.5

Q ss_pred             cCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEE
Q psy8771         493 LSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVL  572 (904)
Q Consensus       493 ~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~  572 (904)
                      ...++++|+|+.|...+.+.++|.++....++   ..++.+..+..+.++++||.-++.|.-+|.++|..|.+++|+.+.
T Consensus       450 t~nns~t~~wkqp~~~~~~~dg~~leld~g~~---g~frevy~g~etmctvdglhfns~y~arvka~n~tg~s~ys~tl~  526 (699)
T KOG4367|consen  450 THNNSATLSWKQPPLSTVPADGYILELDDGNG---GQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLV  526 (699)
T ss_pred             ccCCceEEEeecCCCCCCCCcceEEEeecCCC---CceeEEEecCceeEEecceecchhHHHHHHHhhccCCCcccceeE
Confidence            45679999999776666789999999887653   566788889999999999999999999999999999999998887


Q ss_pred             EecCC
Q psy8771         573 VKTQQ  577 (904)
Q Consensus       573 ~~t~~  577 (904)
                      .+|..
T Consensus       527 lqts~  531 (699)
T KOG4367|consen  527 LQTSE  531 (699)
T ss_pred             eeecc
Confidence            77743

>cd05761 Ig2_Necl-1-4_like Second immunoglobulin (Ig)-like domain of the nectin-like molecules Necl-1 - Necl-4 (also known as cell adhesion molecules CADM3, CADM1, CADM2, and CADM4, respectively)

Probab=97.18  E-value=0.0027  Score=50.74  Aligned_cols=58  Identities=21%  Similarity=0.354  Sum_probs=37.9

Q ss_pred             eEEEEEEccC-CCCeEEEeeCCccccCCCCcee--ecceEEEEee------e--cCCeEEEEEEEecCcc
Q psy8771         123 LNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLP--VGRNVLTLDR------V--TESENYTCIAASVLGV  181 (904)
Q Consensus       123 ~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~--~~~~~l~i~~------l--~d~g~Y~c~a~n~~g~  181 (904)
                      +.|.|.+.|. |.+.|+|+++ +..+.......  ..++.+.+..      -  .++..|+|.|.+....
T Consensus         2 ~~L~C~~~~~~P~~~v~W~~~-~~~l~~~~~~~~~~~~~~~~~~s~l~~~~~~~d~g~~~~C~v~h~~l~   70 (82)
T cd05761           2 VELTCTSSGSKPAATIRWFKG-DKELKGVKLKEEDENGKTFTVTSSLRFQVDREDDGAPIICRVDHPALK   70 (82)
T ss_pred             EEEEEEecCcCcCCeEEEEEC-CEEccCceeeEecCCCCEEEEEEEEEEEcchhhCCCEEEEEEeChhcC
Confidence            6899999875 8999999999 66665332111  1233333321      1  3568999999986654

Ig2_Necl-1-4_like: domain similar to the second immunoglobulin (Ig)-like domain of the nectin-like molecules Necl-1 (also known as cell adhesion molecule 3 (CADM3)), Necl-2 (CADM1), Necl-3 (CADM2) and Necl-4 (CADM4). These nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. The N-terminal Ig-like domain of the extracellular region belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-1 and Necl-2 have Ca(2+)-independent homophilic and heterophilic cell-cel

>cd05901 Ig_Versican Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), versican

Probab=97.12  E-value=0.0053  Score=51.86  Aligned_cols=36  Identities=17%  Similarity=0.338  Sum_probs=31.6

Q ss_pred             cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         156 GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       156 ~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      ++.+|.|.++  +|+|.|.|.+.......+....|.|.
T Consensus        77 g~asL~i~~v~~sD~G~Y~C~V~~g~~~~~~~v~L~V~  114 (117)
T cd05901          77 GDASLTIVKLRASDAGVYRCEVMHGIEDTQDTVSLDVS  114 (117)
T ss_pred             CceEEEEcccccccCEEEEEEEEECCcccEEEEEEEEE
Confidence            3679999999  79999999999988888888888886

Ig_Versican: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), versican. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, the CSPG aggrecan (not included in this group) forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Like aggrecan, versican has a wide distribution in connective tissue and extracellular matrices. Aggregates having other CSPGs substituting for aggrecan may contribute to the structural integrity of many different tissues. Members of the vertebrate HPLN (hyaluronan/HA

>cd05902 Ig_Neurocan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), neurocan

Probab=97.12  E-value=0.0037  Score=52.75  Aligned_cols=72  Identities=22%  Similarity=0.383  Sum_probs=49.5

Q ss_pred             CCCeEEEEEEccCC-------CCeEEEeeCC----ccc----c----------CCCCceee-------cceEEEEeee--
Q psy8771         120 DSPLNLSCVAVGSP-------MPFVKWRKGQ----NIE----L----------TPDDKLPV-------GRNVLTLDRV--  165 (904)
Q Consensus       120 g~~~~l~C~~~g~p-------~p~i~W~k~~----~~~----~----------~~~~~~~~-------~~~~l~i~~l--  165 (904)
                      |..++|.|...-.|       .+.|.|.|..    ...    .          ....|+.+       ++.+|.|.+|  
T Consensus         2 ~~~v~LpC~~~~~p~~~~~~~~~~I~W~k~~~~~~~~~~~v~v~~~~~~~~~~~y~gRvsl~~~~~~~~~asL~i~nv~~   81 (110)
T cd05902           2 SSSVLLPCVFTLPPSASSPPEGPRIKWTKLRPASGQKQRPVLVARDNVVRVAKAFQGRVSLPGYPKNRYNASLVLSRLRY   81 (110)
T ss_pred             CCcEEEeeEEEcCccccCCCCCCEEEEEEeCCCCCceEEEEEECCCCcEEEchhcccEEEeecCCCCCceEEEEECCCCH
Confidence            67889999966433       3678999741    110    0          11123333       3568999999  


Q ss_pred             cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         166 TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +|+|.|.|.+.......+....|.|.
T Consensus        82 ~D~G~Y~C~v~~g~~~~~~~v~L~V~  107 (110)
T cd05902          82 SDSGTYRCEVVLGINDEQDTVPLEVT  107 (110)
T ss_pred             HHCEEEEEEEEECCcccEEEEEEEEE
Confidence            79999999999866667788888776

Ig_Neurocan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), neurocan. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, the CSPG aggrecan (not included in this group) forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Unlike aggrecan which is widely distributed in connective tissue and extracellular matrices, neurocan is localized almost exclusively in nervous tissue. Aggregates having other CSPGs substituting for aggrecan may contribute to the structural integrity of many differen

>PF07686 V-set: Immunoglobulin V-set domain; InterPro: IPR013106 The basic structure of immunoglobulin (Ig) molecules is a tetramer of two light chains and two heavy chains linked by disulphide bonds

Probab=97.09  E-value=0.0019  Score=55.86  Aligned_cols=64  Identities=17%  Similarity=0.303  Sum_probs=46.4

Q ss_pred             eEEecCCCeEEEEEEc-cCCCCeEEEeeCCcc----ccC--------------CCCceee------cceEEEEeee--cC
Q psy8771         115 LEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNI----ELT--------------PDDKLPV------GRNVLTLDRV--TE  167 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~----~~~--------------~~~~~~~------~~~~l~i~~l--~d  167 (904)
                      +.+.+|+++.|.|... ......+.|++....    .+.              ...|+..      .+.+|.|.+|  +|
T Consensus        11 v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~i~~l~~~D   90 (114)
T PF07686_consen   11 VTVQEGESVTLPCSYSSSSNQSSVYWYRQSPGQGPQLIIRYSLSSTNETPTPSYSGRFTFSGNGSQNNFSLTIKNLQPSD   90 (114)
T ss_dssp             EEEETTSEEEEEEEEESSSSGSEEEEEEEETTSEEEEEEEEETTEEEEEEETTETTTEEEEEETTTTEEEEEESSESGGG
T ss_pred             EEEecCCCEEEEEEEeCCCCcceEEEEEECccccceeeeeeccceeeeccccceeeeeeeeecccCCeEEEEECCCCcCc
Confidence            9999999999999999 556678999994220    111              0122221      1347999999  69


Q ss_pred             CeEEEEEEEec
Q psy8771         168 SENYTCIAASV  178 (904)
Q Consensus       168 ~g~Y~c~a~n~  178 (904)
                      +|.|.|.+...
T Consensus        91 sG~Y~C~v~~~  101 (114)
T PF07686_consen   91 SGTYFCQVSTS  101 (114)
T ss_dssp             EEEEEEEEEES
T ss_pred             CEEEEEEEEEC
Confidence            99999999876

There are two types of light chains: kappa and lambda, each composed of a constant domain (CL) and a variable domain (VL). There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are highly modular proteins, in which the variable and constant domains have clear, conserved sequence patterns. The domains in Ig and Ig-like molecules are grouped into four types: V-set (variable; IPR013106 from INTERPRO), C1-set (constant-1; IPR003597 from INTERPRO), C2-set (constant-2; IPR008424 from INTERPRO) and I-set (intermediate; IPR013098 from INTERPRO) []. Structural studies have shown that these domains share a common core Greek-key beta-sandwich structure, with the types differing in the number of strands in the beta-sheets as well as in their sequence patterns [, ]. Immunoglobulin-like domains that are related in both sequence and structure can be found in several diverse protein families. Ig-like domains are involved in a variety of functions, including cell-cell recognition, cell-surface receptors, muscle structure and the immune system []. This entry represents the V-set domains, which are Ig-like domains resembling the antibody variable domain. V-set domains are found in diverse protein families, including immunoglobulin light and heavy chains; in several T-cell receptors such as CD2 (Cluster of Differentiation 2), CD4, CD80, and CD86; in myelin membrane adhesion molecules; in junction adhesion molecules (JAM); in tyrosine-protein kinase receptors; and in the programmed cell death protein 1 (PD1).; PDB: 1PY9_A 2NXY_D 1U9K_B 3RNK_A 3BP6_A 3BIK_B 3SBW_A 1NPU_A 3BP5_A 3RNQ_A ....

>cd07706 IgV_TCR_delta Immunoglobulin (Ig) variable (V) domain of T-cell receptor (TCR) delta chain

Probab=97.09  E-value=0.0024  Score=55.29  Aligned_cols=68  Identities=22%  Similarity=0.388  Sum_probs=48.2

Q ss_pred             cCCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCC-ccc---c---------CCCCceee------cceEEEEeee--c
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQ-NIE---L---------TPDDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~-~~~---~---------~~~~~~~~------~~~~l~i~~l--~  166 (904)
                      ..|.. +.+.+|++++|.|...+. ....+.|+|.. +..   +         ....|+.+      ++.+|.|.++  +
T Consensus         4 q~~~~-v~~~~G~~v~L~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~   82 (116)
T cd07706           4 QAQPD-VSVQVGEEVTLNCRYETSWTNYYIFWYKQLPSGEMTFLIRQKSIYGNATKGRYSVNFQKAQKSISLTISALQLE   82 (116)
T ss_pred             EeCCc-eEEcCCCCEEEEEEEeCCCCceEEEEEEECCCCceEEEEEecCccCCccCCeEEEEEeccCCEEEEEECCCCHH
Confidence            34445 889999999999998864 45679999831 111   0         11245543      2347999999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |+|.|.|.+..
T Consensus        83 Dsg~Y~C~~~~   93 (116)
T cd07706          83 DSAKYFCALST   93 (116)
T ss_pred             HCEEEEEEEEC
Confidence            99999999875

IgV_TCR_delta: immunoglobulin (Ig) variable (V) domain of the delta chain of gamma/delta T-cell receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are heterodimers consisting of alpha and beta chains or gamma and delta chains. Each chain contains a variable (V) and a constant (C) region. The majority of T cells contain alpha/beta TCRs but a small subset contain gamma/delta TCRs. Alpha/beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. Gamma/delta TCRs recognize intact protein antigens; they recognize protein antigens directly and without antigen processing, and MHC independently of the bound peptide. Gamma/delta T cells can also be stimulated by non-peptide antigens such as small phosphate- or amine-containing compounds. The variable domain of gamma/delta TCRs is responsible for antigen recognition and is

>cd05755 Ig2_ICAM-1_like Second immunoglobulin (Ig)-like domain of intercellular cell adhesion molecule-1 (ICAM-1, CD54) and similar proteins

Probab=97.08  E-value=0.0035  Score=51.38  Aligned_cols=66  Identities=18%  Similarity=0.180  Sum_probs=43.2

Q ss_pred             eEEecCCCeEEEEEEcc-CCCCe--EEEeeCCccccCCCCcee------ecceEEEEeee-c-CCeEEEEEEEecCcc
Q psy8771         115 LEVMLDSPLNLSCVAVG-SPMPF--VKWRKGQNIELTPDDKLP------VGRNVLTLDRV-T-ESENYTCIAASVLGV  181 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g-~p~p~--i~W~k~~~~~~~~~~~~~------~~~~~l~i~~l-~-d~g~Y~c~a~n~~g~  181 (904)
                      ..+.+|+.++|.|.+.| .|.+.  |.|+|+ +..+.......      ....+|.+.-- + ++..|+|+|.+..+.
T Consensus        11 ~~~~eG~~~tL~C~v~g~~P~a~L~i~W~rG-~~~l~~~~~~~~~~~~~~~~stlt~~~~r~D~g~~~sC~A~l~l~~   87 (100)
T cd05755          11 SWQPVGKNYTLQCDVPGVAPRQNLTVVLLRG-NETLSRQPFGDNTKSPVNAPATITITVDREDHGANFSCETELDLRP   87 (100)
T ss_pred             CcccCCCcEEEEEEEcCcCCCCcEEEEEeeC-CEEcccceeccccCCCceeEEEEEEecchhhCCcEEEEEEEeccCc
Confidence            44579999999999997 67776  799999 66664321110      01223333322 3 556899999987764

Ig2_ ICAM-1_like: domain similar to the second immunoglobulin (Ig)-like domain of intercellular cell adhesion molecule-1 (ICAM-1, CD54). During the inflammation process, these molecules recruit leukocytes onto the vascular endothelium before extravasation to the injured tissues. ICAM-1 may be involved in organ targeted tumor metastasis. The interaction of ICAM-1 with leukocyte function-associated antigen-1 (LFA-1) plays a part in leukocyte-endothelial cell recognition. This group also contains ICAM-2, which also interacts with LFA-1. Transmigration of immature dendritic cells across resting endothelium is dependent on the interaction of ICAM-2 with, yet unidentified, ligand(s) on the dendritic cells. ICAM-1 has five Ig-like domains and ICAM-2 has two. ICAM-1 may also act as host receptor for viruses and parasites.

>cd04984 IgV_L_lambda Immunoglobulin (Ig) lambda light chain variable (V) domain

Probab=97.07  E-value=0.002  Score=53.78  Aligned_cols=62  Identities=15%  Similarity=0.333  Sum_probs=44.0

Q ss_pred             EEecCCCeEEEEEEccC--CCCeEEEeeCCc-cccC------------CCCceee----cceEEEEeee--cCCeEEEEE
Q psy8771         116 EVMLDSPLNLSCVAVGS--PMPFVKWRKGQN-IELT------------PDDKLPV----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       116 ~~~~g~~~~l~C~~~g~--p~p~i~W~k~~~-~~~~------------~~~~~~~----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      .+.+|++++|.|.+.+.  ....+.|++... ....            ...|+..    ...+|.|.++  +|+|.|.|.
T Consensus         2 ~v~~G~~v~l~C~~~~~~~~~~~i~Wy~q~~g~~~~~l~~~~~~~~~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~   81 (98)
T cd04984           2 SVSPGETVTITCTGSSGNISGNYVNWYQQKPGSAPRYLIYEDSDRPSGIPDRFSGSKSGNTASLTISGAQTEDEADYYCQ   81 (98)
T ss_pred             ccCCCCCEEEEEEEcCCCcCCCCEEEEEECCCCCccEEEEeccccCCCCCCCEEEEccCCEEEEEECCCChhhCEEEEEE
Confidence            57799999999999876  566799998422 1110            0124443    2347999999  699999998


Q ss_pred             EEe
Q psy8771         175 AAS  177 (904)
Q Consensus       175 a~n  177 (904)
                      +.+
T Consensus        82 ~~~   84 (98)
T cd04984          82 VWD   84 (98)
T ss_pred             Ecc
Confidence            875

IgV_L_lambda: Immunoglobulin (Ig) light chain, lambda type, variable (V) domain. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. In Ig, each chain is composed of one variable domain (IgV) and one or more constant domains (IgC); these names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. There are five types of heavy chains (alpha, gamma, delta, epsilon, and mu), which determine the type of immunoglobulin: IgA, IgG, IgD, IgE, and IgM, respectively. In higher vertebrates, there are two types of light chain, designated kappa and lambda, which seem to be functionally identical, and can associate with any of the heavy chains.

>KOG3632|consensus

Probab=97.07  E-value=0.0038  Score=69.52  Aligned_cols=260  Identities=19%  Similarity=0.214  Sum_probs=148.9

Q ss_pred             CcceEEEeecCCeEEEEEeCCC-----ccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCC-CCCeEEEEEEEEcCCC
Q psy8771         204 PLDVKISEVTATSVRLDWTYPS-----ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLS-PYTEYEFYIIAVNNLG  277 (904)
Q Consensus       204 p~~l~~~~~~~~sv~l~W~~~~-----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~-p~~~Y~~~v~a~n~~g  277 (904)
                      |..+.+......++.+.|++|.     .++..|.+....    .-...+.....+...+..|. .+..|.+.|.+....|
T Consensus       581 pr~~~~vkqla~sv~vawepps~pP~~~~~~~~~~~v~~----elrq~l~~gs~tka~~E~ld~~a~s~~isvq~ltSrG  656 (1335)
T KOG3632|consen  581 PRTGAAVKQLAGSVHVAWEPPSSPPFTAPARMIGATVLM----ELRQTLYAGSLTKAMQESLDNSAHSGYISVQRLTSRG  656 (1335)
T ss_pred             ccchhhhhhhccceeeeccCCCCCCccccceeeeeecch----hhhhhcccccchHHHHhhccccCCceeeehhhhhccC
Confidence            3344444555678999999973     233444443221    11111222222333344443 2446888888888888


Q ss_pred             CCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEee----ceeEEEEEcCCCCCcEEEEE
Q psy8771         278 RGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRI----GLVETYSLTGLYPNTLYYIW  353 (904)
Q Consensus       278 ~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~----~~~~~~~~~~L~~~~~Y~v~  353 (904)
                      .+.........-. . .+..|.++.+.+.+.++..++|-+......+.++-.....    .....|++-+|.||+.|+++
T Consensus       657 sqd~lrc~Llvgg-~-a~vvpsqlrv~n~tqtSa~itwvp~nsn~~Hviyln~eE~~ps~a~~y~ytf~~lrpgt~y~a~  734 (1335)
T KOG3632|consen  657 SQDQLRCILLVGG-A-APVVPSQLRVWNATQTSAMITWVPFNSNFLHVIYLNAEEPRPSVAEMYNYTFMRLRPGTDYWAS  734 (1335)
T ss_pred             CCCcceeeEeccc-c-ccccchhhhhhhhhchhhheeeeecCCCcceeeecCCccCCCchhhhhHHHHhccCCCCcccee
Confidence            7765544433332 2 2478999999999999999999876555444433221111    12235677888888888887


Q ss_pred             EEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEe
Q psy8771         354 LAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT  433 (904)
Q Consensus       354 v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~  433 (904)
                      |-+.-....                                           ++..-.                      
T Consensus       735 vea~~p~q~-------------------------------------------pwdl~~----------------------  749 (1335)
T KOG3632|consen  735 VEAALPRQE-------------------------------------------PWDLRM----------------------  749 (1335)
T ss_pred             cccccCcCC-------------------------------------------Cccccc----------------------
Confidence            765421100                                           000000                      


Q ss_pred             eccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEe-cCCceEEEEecCCCC-----
Q psy8771         434 KQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRP-LSSSTMVIQWDEPET-----  507 (904)
Q Consensus       434 ~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~-~~~~~~~l~W~~p~~-----  507 (904)
                                                   .-.+.....+.+.|..+.|+.+|.++++.. .+...+.++|.+|--     
T Consensus       750 -----------------------------v~~etr~atv~f~tLpAGppappldV~vE~g~spg~l~vswrPptldsag~  800 (1335)
T KOG3632|consen  750 -----------------------------VPMETRQATVLFRTLPAGPPAPPLDVKVETGGSPGRLEVSWRPPTLDSAGC  800 (1335)
T ss_pred             -----------------------------chhhhhccceeeecccCCCCCCchheeeecCCCCceeeeeccCceeccccc
Confidence                                         001122345677788888999999998865 456789999999621     


Q ss_pred             CCC-ceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCC-CCeEEEEEEEEeCCCCCCCCC
Q psy8771         508 PNG-QITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTP-HTIYTIRVQAFTSVGPGPLSA  569 (904)
Q Consensus       508 ~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p-~t~Y~~~V~a~~~~g~~~~S~  569 (904)
                      .+| .+++|.|+.....      ...+..  ...+...+.-|.- -..-.|.|+.....|++.-|.
T Consensus       801 sngv~vtgYavyadgqk------v~Evafptagst~VelsQlq~~l~~~~V~vRtms~~gesvdsi  860 (1335)
T KOG3632|consen  801 SNGVAVTGYAVYADGQK------VEEVAFPTAGSTKVELSQLQDGLYHGAVGVRTMSVPGESVDSI  860 (1335)
T ss_pred             cCceeeeeeeeeeCCce------eeeeecccCCceEEEeeeehhhheecceeEEecccCccccccc
Confidence            223 7899999877321      112222  2333344444444 334457777777777664443

>cd05846 Ig1_MRC-OX-2_like First immunoglobulin (Ig) domain of rat MRC OX-2 antigen (also known as CD200) and similar proteins

Probab=97.04  E-value=0.0053  Score=51.00  Aligned_cols=71  Identities=20%  Similarity=0.237  Sum_probs=47.6

Q ss_pred             CCCeEEEEEEccCCC-CeEEEeeCCcc---cc----C-C--------CCceee-----cceEEEEeee--cCCeEEEEEE
Q psy8771         120 DSPLNLSCVAVGSPM-PFVKWRKGQNI---EL----T-P--------DDKLPV-----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       120 g~~~~l~C~~~g~p~-p~i~W~k~~~~---~~----~-~--------~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      |++++|.|....... -.|.|+|..+.   .+    . .        ..|...     .+.+|.|.++  +|+|.|.|..
T Consensus         1 G~~vtL~C~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~nv~~~D~G~Y~C~~   80 (97)
T cd05846           1 GGNVTLSCNLTLPEEVLQVTWQKIQGSSPENIATYSEKYGVKIQPSYFRRRSITSLGLNSTSITIWNVTLEDEGCYKCIF   80 (97)
T ss_pred             CCcEEEEEEeCCCCeeEEEEEEEcCCCCceEEEEEcccCCcccCCCccCeEEEcCCCCCccEEEEeCCceeeeEEEEEEE
Confidence            789999998765543 36999985221   10    0 0        112221     3568999999  7999999986


Q ss_pred             E-ecCcceEEEEEEEE
Q psy8771         176 A-SVLGVIETSTIVKV  190 (904)
Q Consensus       176 ~-n~~g~~~~~~~l~v  190 (904)
                      . ...|.....+.|+|
T Consensus        81 ~~~p~g~~~~~~~L~v   96 (97)
T cd05846          81 NTFPDGSKSGTMCLTV   96 (97)
T ss_pred             EeCCCCCeeeEEEEEE
Confidence            5 46677777777776

Ig1_ MRC-OX-2_like: domain similar to the first immunoglobulin (Ig) domain of rat MRC OX-2 antigen (also known as CD200). MRC OX-2 is a membrane glycoprotein expressed in a variety of lymphoid and non-lymphoid cells in rats. It has a similar broad distribution pattern in humans. MRC OX-2 may regulate myeloid cell activity. The protein has an extracellular portion containing two Ig-like domains, a transmembrane portion, and a cytoplasmic portion.

>cd00098 IgC Immunoglobulin Constant domain

Probab=97.02  E-value=0.0023  Score=53.10  Aligned_cols=62  Identities=29%  Similarity=0.498  Sum_probs=43.2

Q ss_pred             ecCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCCc---e-eecceE------EEEeee--cCCeEEEEEEEecCc
Q psy8771         118 MLDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDK---L-PVGRNV------LTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       118 ~~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~---~-~~~~~~------l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      ..|+.++|.|.+.|. |. +.|+|+++ |..+.....   . ...++.      |.|...  .+++.|+|.|.+...
T Consensus        11 ~~~~~~~L~C~a~g~~P~~~~i~W~~~-g~~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~~~~~y~C~v~h~~~   86 (95)
T cd00098          11 LLGGSVTLTCLATGFYPPDITVTWLKN-GKELTSGVTTTPPVPNSDGTYSVSSQLTVSPSDWNSGDTYTCVVTHESL   86 (95)
T ss_pred             HcCCCeEEEEEEeeEECCCcEEEEEEC-CEECCCceeccccccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence            468999999999998 64 68999999 666654432   1 123333      333333  389999999988654

IgC: Immunoglobulin constant domain (IgC). Members of the IgC family are components of immunoglobulin, T-cell receptors, CD1 cell surface glycoproteins, secretory glycoproteins A/C, and Major Histocompatibility Complex (MHC) class I/II molecules. In immunoglobulins, each chain is composed of one variable domain (IgV) and one or more IgC domains. These names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. The IgV domain is responsible for antigen binding, and the IgC domain is involved in oligomerization and molecular interactions.

>KOG4152|consensus

Probab=97.00  E-value=0.0033  Score=64.83  Aligned_cols=74  Identities=34%  Similarity=0.619  Sum_probs=59.5

Q ss_pred             EEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEec-CCCCCCCCCCceEEecCCCeEEEEEeCCCCCC-CCceEEEEE
Q psy8771         542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT-QQGVPSQPRDLRAVDIQETAVTLAWSKPTHSG-ENIISYELY  616 (904)
Q Consensus       542 ~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t-~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~-~~~~~y~v~  616 (904)
                      .-..|.+|+.|+|+|.|+|..|.+++|....+.| .++.|.+|..+++.. +-..+.+.|.++..++ +.|..|..+
T Consensus       650 ~k~~lv~Gq~yrfrV~aIng~G~gp~s~i~~~kTc~pG~P~apS~~ri~k-~~eGi~l~weppt~p~sg~Iieys~y  725 (830)
T KOG4152|consen  650 VKTSLVTGQAYRFRVTAINGKGPGPASTILKLKTCAPGKPTAPSGARIKK-TIEGISLVWEPPTKPGSGTIIEYSPY  725 (830)
T ss_pred             cccccccccceeeeeeeeeccCCCchhhheeeeeccCCCCCCcccccccc-cccceeecccCCCCCCCcceEEeehh
Confidence            4457889999999999999999999999988776 456677888887765 5667999999998874 456666655

>cd07705 Ig2_Necl-1 Second immunoglobulin (Ig)-like domain of nectin-like molcule-1 (Necl-1, also known as cell adhesion molecule3 (CADM3))

Probab=97.00  E-value=0.0066  Score=48.48  Aligned_cols=57  Identities=28%  Similarity=0.507  Sum_probs=38.3

Q ss_pred             eEEEEEEccC-CCCeEEEeeCCccccCCCCc-ee-ecc-eEEEEee------e--cCCeEEEEEEEecCc
Q psy8771         123 LNLSCVAVGS-PMPFVKWRKGQNIELTPDDK-LP-VGR-NVLTLDR------V--TESENYTCIAASVLG  180 (904)
Q Consensus       123 ~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~-~~-~~~-~~l~i~~------l--~d~g~Y~c~a~n~~g  180 (904)
                      ++|.|.+.|. |.+.|+|+++ |..+..... .. ..+ +.+.+..      .  .++..|+|.|.+...
T Consensus         2 ~~LtC~a~g~~P~~~ItW~k~-g~~l~~~~~~~~~~~~~~t~~~~s~l~~~~~~~d~g~~~tC~v~h~~l   70 (83)
T cd07705           2 AKLRCTSSGSKPAANIKWRKG-DQELEGAPTSVLEDGNGKTFTVSSSVEFQVTREDDGAEITCSVGHESL   70 (83)
T ss_pred             EEEEEEecCccCCCEeEEEEC-CEECCCcceeEEECCCCCEEEEEEEEEEEecchhCCCEEEEEEECccc
Confidence            6899999985 9999999999 666654322 11 122 3443322      2  377999999988654

Ig2_Necl-1: second immunoglobulin (Ig)-like domain of nectin-like molcule-1 (Necl-1, also known as cell adhesion molecule3 (CADM3)). These nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. The N-terminal Ig-like domain of the extracellular region belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-1 and Necl-2 have Ca(2+)-independent homophilic and heterophilic cell-cell adhesion activity. Necl-1 is specifically expressed in neural tissue and is important to the formation of synapses, axon bundles, and myel

>cd05711 Ig_FcalphaRI Immunoglobulin (IG)-like domain of of FcalphaRI

Probab=96.96  E-value=0.0039  Score=51.27  Aligned_cols=69  Identities=17%  Similarity=0.132  Sum_probs=46.6

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC---Cc-eeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD---DK-LPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~---~~-~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      |.|...|.  ..+..|++++|.|.... +.-.+.|+|+ +......   .. .......+.|..+  +|+|.|.|....
T Consensus         2 P~l~a~p~--~vV~~G~~VTL~C~~~~-~~~~f~l~k~-g~~~~~~~~~~~~~~~~~a~f~I~~~~~~~~G~Y~C~~~~   76 (94)
T cd05711           2 PFLSAHPS--PVVPSGENVTLQCHSDI-RFDRFILYKE-GRSKPVLHLYEKHHGGFQASFPLGPVTPAHAGTYRCYGSY   76 (94)
T ss_pred             CEEEecCC--CccCCCCeEEEEEecCC-CCCEEEEEEC-CCCCCceecccccCCeEEEEEEecCCCcccCEEEEEEEEC
Confidence            55555554  77889999999998765 4567899998 4322110   00 0112347888888  699999998753

IG_FcalphaRI : immunoglobulin (IG)-like domain of of FcalphaRI. FcalphaRI (CD89) is an IgA-specific receptor that is expressed on monocytes, eosinophils, neutrophils and macrophages. FcalphaRI mediates IgA-induced immune effector responses such as phagocytosis, antibody-dependent cell-mediated cytotoxicity and respiratory burst. Both monomeric and dimeric IgA can bind to FcalphaRI, and monomeric or dimeric IgA immune complexes can activate phagocytosis and other immune responses through the clustering of FcalphaRI. The Fc RI ectodomain is comprised of two Ig-like domains oriented at about 90 degree to each another.

>cd07694 Ig2_CD4 Second immunoglobulin (Ig) domain of CD4

Probab=96.92  E-value=0.0095  Score=46.59  Aligned_cols=74  Identities=20%  Similarity=0.237  Sum_probs=51.9

Q ss_pred             eEEecCCCeEEEEEEccCC--CCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSP--MPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      -.+..|++++|.|.....+  .+.|+|...++...   .....+..+|.+..|  .|+|..+|.+....-+.++...+.|
T Consensus         9 ~~lL~G~sLtLtl~~~s~s~p~~~i~w~~P~n~~~---~~~~~~~ktL~~~qv~~qdSG~WtC~V~~~~k~~~~~~~V~V   85 (88)
T cd07694           9 DHVLSGTNLTLTLHGSSNSLPAFKVEWRGPGNKSK---QILNQDKKTLNLVQLGPNDSGTWDCIVSVNSSEKTLKLDIKV   85 (88)
T ss_pred             CeeecCCcEEEEEecCCCCCCCccEEEeCCCCccc---eeccCCccEEEeceeCcccCCEEEEEEEECceEEEEEeeEEE
Confidence            4567899999999996544  45999998744322   111236778999999  6999999999765444555555555


Q ss_pred             E
Q psy8771         191 Q  191 (904)
Q Consensus       191 ~  191 (904)
                      .
T Consensus        86 l   86 (88)
T cd07694          86 L   86 (88)
T ss_pred             E
Confidence            4

Ig2_CD4; second immunoglobulin (Ig) domain of CD4. CD4 and CD8 are the two primary co-receptor proteins found on the surface of T cells, and the presence of either CD4 or CD8 determines the function of the T cell. CD4 is found on helper T cells, where it is required for the binding of MHC (major histocompatibility complex) class II molecules, while CD8 is found on cytotoxic T cells, where it is required for the binding of MHC class I molecules. CD4 contains four immunoglobulin domains, with the first three included in this hierarchy. The fourth domain has a general Ig architecture, but has slight topological changes in the arrangement of beta strands relative to the other structures in this family and is not specifically included in the hierarchy.

>KOG0613|consensus

Probab=96.91  E-value=0.099  Score=61.50  Aligned_cols=346  Identities=14%  Similarity=0.053  Sum_probs=166.6

Q ss_pred             cCCeEEEEEEEEeeCCCCCCCCCC---ceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCC
Q psy8771         448 YPNTLYYIWLAAQSPRGEGATTPP---IPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQ  523 (904)
Q Consensus       448 ~p~~~Y~~~v~a~~~~g~~~~s~~---~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~  523 (904)
                      .++..|.+.+...-..|.+.+...   ..+......+...+.++.+.....+.+.+.|..+...-+ .+..|...-....
T Consensus       299 ~~~~q~~~~v~~~~~i~~~~~~p~~~~~aaa~~~~~~v~~~~~~~v~a~d~~~v~m~~~~~~~~~p~~~~~~~~~~~~~~  378 (1205)
T KOG0613|consen  299 RQGCQDRFKVTEEAPIGKGKPGPESLQAAAARPPEVPVGLVRNLSVTARDNTLVEMPTALSGTQKPDEAQGYHGEEVSSE  378 (1205)
T ss_pred             cCCcccceeeeEEeeccccccCchhhhhhccCCccccccccccceeccccCcceeecccccCCcCCchheeecccccccc
Confidence            344556666666665665443332   333334445566677888888888899999987533222 2344443332222


Q ss_pred             CCCCcceEEEee--cCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCC-C-C-------------CCCCCC-
Q psy8771         524 SLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ-G-V-------------PSQPRD-  585 (904)
Q Consensus       524 ~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~-~-~-------------p~~p~~-  585 (904)
                      +   ..|.....  .....+.+.++.++..|..++.+.|..|.........+.-.. + .             +.-+.. 
T Consensus       379 ~---~~~~~~~~~~~ts~~~~~~~~~~~e~~~~~~~a~n~~g~~~~~~~~~vs~~~~gt~~~~~kk~~~~t~~L~~~~~i  455 (1205)
T KOG0613|consen  379 S---LGALPCPVGTVTSHTYTIKDAGPGEGYFTRVPAVNKGGTEQTIAESTVSEEMPGTQPPKFKKDVSTTDLLTVKDEI  455 (1205)
T ss_pred             c---ccccccccccccCcchhhhhcCcccccccccceeccCCcccccchhhcccccCCCCCccccccccccccccCCccc
Confidence            1   22222222  334457888999999999999999998865433322221110 0 0             000011 


Q ss_pred             -ceEEecCCC--eEEEEEeCCCCCC-CC--------ceEEEEEecc----------------CCCCCcceEEEeeccceE
Q psy8771         586 -LRAVDIQET--AVTLAWSKPTHSG-EN--------IISYELYWND----------------TYAKPRDLRAVDIQETAV  637 (904)
Q Consensus       586 -~~~~~~~~~--~~~l~W~~~~~~~-~~--------~~~y~v~~~~----------------~~~~p~~l~~~~~~~~~~  637 (904)
                       +++...+..  ...++|.....+- +.        +..--+....                .+.+..+..-.......-
T Consensus       456 ~~~~~~~s~~~~~~~~tt~~~~~~~s~~s~~l~r~~~tslLlk~~~~~~~A~~~~a~~~~~~k~~~~~~~~l~~~~s~a~  535 (1205)
T KOG0613|consen  456 TVRTPDSSTSMPMTTVTTIKDGLPLSDRSVTLTRDVLTSLLLKVASLSDGAQYTRALRTLQGKPVPSLDRKLPAAKSSAP  535 (1205)
T ss_pred             ccccCCCCccccceeEeeccCCcccccccccccccchhhheeeccCCCccchhhhhhhccCCCCCCcccccccccccCCc
Confidence             111111111  1223333221110 00        0000000000                111222222222233333


Q ss_pred             EEeccCCCCCCCceeeEEEEEEeCC-------------ccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCC
Q psy8771         638 TLAWSKPTHSGENIISYELYWNDTY-------------AKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATT  704 (904)
Q Consensus       638 ~l~w~~~~~~~~~~~~y~v~~~~~~-------------~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s  704 (904)
                      ...|+.+...+.+...|...+....             +......... .+...+.++.|++.|.+.+.+.+..|++.++
T Consensus       536 ~~~~~~~~~~g~p~l~~~~~~~E~~~vs~~~~~a~~qlg~~~~~~~r~-gtt~t~~~~~p~~~~~~t~~~k~~~gE~~ps  614 (1205)
T KOG0613|consen  536 KPIHTQENQPGTPTLEWEPKPAEASKVSLHYASATRQLGVWRVPESRP-GTTETIGSILPGHEYHVTIKAKNELGESRPS  614 (1205)
T ss_pred             ccccccccCCCCcccccCCCcccccccchhhhhhhhhccCCcccccCC-CcccccccccccccceeehhhhhcccccCCC
Confidence            3455555545555555544444332             1111111111 2778889999999999999999999998877


Q ss_pred             CCeeEEecCCCCC---CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEec
Q psy8771         705 PPIPVRTKQYVPG---APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLD  780 (904)
Q Consensus       705 ~~~~~~t~~~~p~---~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~  780 (904)
                      . -..+....-|.   ..|..-........+..++|.....+ .-.....|.......++.-. +....-. ..-...+.
T Consensus       615 ~-~~~t~k~~D~~q~~~~~~~~~~~ks~~~~~k~s~l~~l~k-~~~~a~~~~~~~~~vd~~~K-~kv~~~~~e~d~~i~~  691 (1205)
T KOG0613|consen  615 S-KSTTLKWQDPSQLKRRPVSEPSYKSPDSSQKPSKLVGLSK-MDLPANLESQVKPTVVSSPK-KKVKKKKQEKDLEILA  691 (1205)
T ss_pred             C-CCccccccccccccccccCCccccccccccchhcccchhh-ccccccceeeeeccccCCcc-ccccccccccchhhhc
Confidence            3 11111111111   11122222333556788889887532 22234444444444332211 1111111 33445566


Q ss_pred             CCCCCceEEEEEEEeeCCCC
Q psy8771         781 ELKKWTEYRIWVLAGTSIGD  800 (904)
Q Consensus       781 ~L~p~t~Y~~~V~a~~~~g~  800 (904)
                      .+.+.+.|.+.+.+.+..+.
T Consensus       692 ~~~t~si~~p~k~~e~~~~~  711 (1205)
T KOG0613|consen  692 KKGTTSIVEPEKPPESEAAT  711 (1205)
T ss_pred             cCCCCcccccccCCccccCC
Confidence            67777778777777776655

>KOG3515|consensus

Probab=96.89  E-value=0.2  Score=56.41  Aligned_cols=60  Identities=15%  Similarity=0.192  Sum_probs=46.7

Q ss_pred             EEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCC
Q psy8771         542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPT  604 (904)
Q Consensus       542 ~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~  604 (904)
                      .+-+..++..|.+.+.+.|..|.+..+..+.--+   .+..|.+|.+.......+.|.|.+..
T Consensus       657 ~~~~~~~~~~y~~~c~t~n~lg~~~v~~~~~~~t---~~~~~~n~~~~~~~~~~i~l~~~p~f  716 (741)
T KOG3515|consen  657 WILNHIDGSDYENGCTTQNLLGSDHVSGAIHSGT---ASVGPINLTYDNLTYSTISLEWMPGF  716 (741)
T ss_pred             cccCCcchhhhcceeeecccCCCccccceecCCc---CCCCccceEeeeeeeeeeceeeeecc
Confidence            3445567889999999999999877666544433   45678899999999999999999875

>KOG4228|consensus

Probab=96.76  E-value=0.0098  Score=68.37  Aligned_cols=277  Identities=19%  Similarity=0.202  Sum_probs=167.8

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCC
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVG  563 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g  563 (904)
                      .|..+.++.....+....|.....   ....|.+.++...+.    ...........+....+.+...|.+  .++|..|
T Consensus        27 ~~~~~~vt~~~~~~~~~~~~~~~t---~~~~y~v~~~~~~s~----~~~~~~~~~~~~s~~~~~~~~~~~~--~evnt~~   97 (1087)
T KOG4228|consen   27 GPSTPNVTGSTATSWVQAELLGST---WPNYYQVIFKALSSG----YGYIDVDLTTRLSYPCLSPPSFLEL--VEVNTIG   97 (1087)
T ss_pred             CCCCcccccccccceeehhhccCC---ChhhhheeeeEeccC----cceeeccceeecccCCCCCcchhhh--hhccccc
Confidence            344566677777889999988653   456777777766543    2233334444567777888888888  7788877


Q ss_pred             CCCCCCcEEEecCCCCC-CCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771         564 PGPLSAPVLVKTQQGVP-SQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS  642 (904)
Q Consensus       564 ~~~~S~~~~~~t~~~~p-~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~  642 (904)
                      .+..+.+..-++....+ ..+....+.........++|.....                                     
T Consensus        98 ~a~~~~~~~~rt~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-------------------------------------  140 (1087)
T KOG4228|consen   98 RAPFQCPVAPRTGEQATLSLQRDVQALMLSAATAHVNWRRFSA-------------------------------------  140 (1087)
T ss_pred             ccccccccCCccccccccccccchhhhhhhhhhhccCcccccc-------------------------------------
Confidence            77777665554443332 2233333333334444555554421                                     


Q ss_pred             CCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCC
Q psy8771         643 KPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN  722 (904)
Q Consensus       643 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~  722 (904)
                          ..+                                          +.+....|.++++..+.+.|....|..++  
T Consensus       141 ----~~~------------------------------------------~~~~~~~~~~~~~t~i~i~~~~~~p~~~~--  172 (1087)
T KOG4228|consen  141 ----TVG------------------------------------------PLAIASPGLGPPSTYIQITTNANSPIQPG--  172 (1087)
T ss_pred             ----ccc------------------------------------------ccccCCcccCCCCceEEEeccCCCCCCCC--
Confidence                000                                          66777777777777788888888777654  


Q ss_pred             cEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCCCCC
Q psy8771         723 VSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGP  802 (904)
Q Consensus       723 l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~  802 (904)
                         .......++++|.++.    ...+..|.+.+...+....  ..............+|.+-..|.++..+....+.+.
T Consensus       173 ---~~~~~~~it~~w~~~~----~~~~~~ykl~~~~~d~~~~--~~v~~~~~~~~~t~~~~~~~~~~~~~ae~~~~~~~~  243 (1087)
T KOG4228|consen  173 ---EEEEYTTITGSWSPPH----AVSLDTYKLLHLDPDTGYE--ISVTLTPPGSGGTGDLGPPSISRFKCAEPDRGPLGS  243 (1087)
T ss_pred             ---cceEEEEEEecCCCCC----cccchhhhhhhcCCcccce--eeeeccCCCCCcccCCCCcccccccccCccccccCC
Confidence               4456789999999884    4568889998887743221  112222455555677888889999988888777776


Q ss_pred             CCCcEEeecCCCCCCC--------CccCCcceeeCCCCCceeeeeeeecCCceEEecCCCeeEEEEcCCCCCcEEEEEEE
Q psy8771         803 SSYPITIRTHEDDPSE--------VCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVA  874 (904)
Q Consensus       803 ~s~~~~~~t~~~~P~~--------v~~~~~~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~  874 (904)
                      ....+.+++...+-..        ....-.+|..+.....             .....+... ..+.+|.|.+.|.+.|.
T Consensus       244 ~~a~i~~r~~~s~~~~~~~~~~~~~~~~~~t~~~~~~~~S-------------~~~v~~~~~-~~i~~~~p~~~~~~~it  309 (1087)
T KOG4228|consen  244 STAEIEARQLQSVSKKNFETKHVFKNLVPGTWESFSNYAS-------------TTNVSGRSF-PLIVNLNPETEYSFVIT  309 (1087)
T ss_pred             CCcceEEEehhhhhccccccceeecccCCceeeeeecccc-------------cCcccCCCc-ceeccCCCcccccceee
Confidence            6667777765542111        0001115653322211             111233344 66777777777777777


Q ss_pred             EEe
Q psy8771         875 ALT  877 (904)
Q Consensus       875 a~n  877 (904)
                      ...
T Consensus       310 ~~~  312 (1087)
T KOG4228|consen  310 VRL  312 (1087)
T ss_pred             ccc
Confidence            765

>cd05884 Ig2_Necl-3 Second immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3, also known as cell adhesion molecule 2 (CADM2))

Probab=96.75  E-value=0.0077  Score=47.99  Aligned_cols=57  Identities=19%  Similarity=0.350  Sum_probs=37.0

Q ss_pred             eEEEEEEcc-CCCCeEEEeeCCccccCCCCcee---ecceE------EEEeee--cCCeEEEEEEEecCc
Q psy8771         123 LNLSCVAVG-SPMPFVKWRKGQNIELTPDDKLP---VGRNV------LTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       123 ~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~~~~---~~~~~------l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      ++|.|.+.| .|...|+|+|+ |..+.......   ..+++      |.|.--  .++..|+|.+.+..-
T Consensus         2 ~~LtC~a~gf~P~~~itW~kn-g~~l~~~~~~~~~~~~~~t~~~~s~L~~~~~~~d~g~~ytC~v~h~~l   70 (83)
T cd05884           2 MQLTCKTSGSKPAADIRWFKN-DKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAIICRVDHESL   70 (83)
T ss_pred             EEEEEEeCCccCCCEEEEEEC-CEECcCceeeEeeCCCCCEEEEEEEEEEEcccccCCCEEEEEEechhc
Confidence            689999998 67889999999 66665433221   12233      333221  367899999987543

Ig2_Necl-3: second immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3, also known as cell adhesion molecule 2 (CADM2)). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). These have an extracellular region containing three Ig-like domains, one transmembrane region, and one cytoplasmic region. Necl-3 has been shown to accumulate in tissues of the central and peripheral nervous system, where it is expressed in ependymal cells and myelinated axons. It is observed at the interface between the axon shaft and the myelin sheath. Ig domains are likely to participate in ligand binding and recognition.

>cd05716 Ig_pIgR Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR)

Probab=96.69  E-value=0.0098  Score=49.59  Aligned_cols=65  Identities=14%  Similarity=0.192  Sum_probs=45.8

Q ss_pred             eEEecCCCeEEEEEEcc-CCCCeEEEeeCCccc----c--------CCCCceee------cceEEEEeee--cCCeEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVG-SPMPFVKWRKGQNIE----L--------TPDDKLPV------GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~~~~----~--------~~~~~~~~------~~~~l~i~~l--~d~g~Y~c  173 (904)
                      +.+.+|++++|.|.... .....+.|+|.....    +        ....|+.+      ...+|.|.++  +|+|.|.|
T Consensus         2 v~~~~G~~vtl~C~~~~~~~~~~~~W~r~~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C   81 (98)
T cd05716           2 VTGELGGSVTIPCPYPPKNRSYEKYWCKWGSAGCCLIIVSEGSVQSQYEGRVSLTDDPDNGVFTVTLNQLRKEDAGWYWC   81 (98)
T ss_pred             EEEEeCCeEEEEeeCCCCCCCcEeEeECCCCCCCCeEEECCCccccccCCCEEEEecCCCCEEEEEEcCCCHHHCEEEEE
Confidence            67889999999999876 345678999853211    1        11234433      2347999999  79999999


Q ss_pred             EEEecC
Q psy8771         174 IAASVL  179 (904)
Q Consensus       174 ~a~n~~  179 (904)
                      .+....
T Consensus        82 ~~~~~~   87 (98)
T cd05716          82 GVGDDG   87 (98)
T ss_pred             EcccCC
Confidence            887643

Ig_pIgR: Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR). pIgR delivers dimeric IgA and pentameric IgM to mucosal secretions. Polymeric immunoglobulin (pIgs) are the first defense against pathogens and toxins. IgA and IgM can form polymers via an 18-residue extension at their c-termini referred to as the tailpiece. pIgR transports pIgs across mucosal epithelia into mucosal secretions. Human pIgR is a glycosylated type I transmembrane protein, comprised of a 620 residue extracellular region, a 23 residue transmembrane region, and a 103 residue cytoplasmic tail. The extracellular region contains five domains that share sequence similarity with Ig variable (v) regions.

>cd07698 IgC_MHC_I_alpha3 Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain

Probab=96.62  E-value=0.011  Score=48.65  Aligned_cols=59  Identities=29%  Similarity=0.458  Sum_probs=38.1

Q ss_pred             CCCeEEEEEEccC-CCC-eEEEeeCCccccCCCC---c-eeecceEEEEeee-----cCCeEEEEEEEecC
Q psy8771         120 DSPLNLSCVAVGS-PMP-FVKWRKGQNIELTPDD---K-LPVGRNVLTLDRV-----TESENYTCIAASVL  179 (904)
Q Consensus       120 g~~~~l~C~~~g~-p~p-~i~W~k~~~~~~~~~~---~-~~~~~~~l~i~~l-----~d~g~Y~c~a~n~~  179 (904)
                      |+.++|.|.+.|. |.. .|+|.|+ +..+....   . ....++.+.+...     .++..|+|.+....
T Consensus        14 ~~~~~L~C~a~gF~P~~i~v~W~~~-g~~~~~~~~~~~~~~~~d~ty~~~s~l~v~~~~~~~ytC~V~H~~   83 (93)
T cd07698          14 DGSLTLSCHATGFYPRDIEVTWLRD-GEDSVDDVESGEILPNGDGTYQLWVTLEVPPEDKARYSCRVEHSG   83 (93)
T ss_pred             CCcEEEEEEEEEEeCCCcEEEEEEC-CEECcccccccceEECCCCeEEEEEEEEECCCCCCEEEEEEEeCC
Confidence            7889999999995 654 8999999 53222211   1 2224455444322     48899999987643

IgC_MHC_I_alpha3; Immunoglobulin (Ig) domain of major histocompatibility complex (MHC) class I alpha chain. Class I MHC proteins bind antigenic peptide fragments and present them to CD8+ T lymphocytes. Class I molecules consist of a transmembrane alpha chain and a small chain called the beta2 microglobulin. The alpha chain contains three extracellular domains, two of which fold together to form the peptide-binding cleft (alpha1 and alpha2), and one which has an Ig fold (alpha3). Peptide binding to class I molecules occurs in the endoplasmic reticulum (ER) and involves both chaperones and dedicated factors to assist in peptide loading. Class I MHC molecules are expressed on most nucleated cells.

>cd05771 IgC_Tapasin_R Tapasin-R immunoglobulin-like domain

Probab=96.57  E-value=0.034  Score=49.91  Aligned_cols=33  Identities=18%  Similarity=0.270  Sum_probs=29.7

Q ss_pred             EEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         159 VLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       159 ~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +|.|.++  +|+|.|.|.+.+..|..+..+.|.|.
T Consensus         2 sL~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~v~   36 (139)
T cd05771           2 SLTLPGLTVHDEGTYICSVSTPPHQAQQIIQLSVS   36 (139)
T ss_pred             eEEECCCCHHHCEEEEEEEEccCcceeeEEEEEEe
Confidence            6899999  69999999999988888888888887

IgC_Tapasin_R: Immunoglobulin-like domain on Tapasin-R. Tapasin is a V-C1 (variable-constant) immunoglobulin superfamily molecule present in the endoplasmic reticulum (ER), where it links MHC class I molecules to the transporter associated with antigen processing (TAP). Tapasin-R is a tapasin-related protein that contains similar structural motifs to Tapasin, with some marked differences, especially in the V domain, transmembrane and cytoplasmic regions. The majority of Tapasin-R is located within the ER; however, there may be some expression of Tapasin-R at the cell surface. Tapasin-R lacks an obvious ER retention signal.

>cd05712 Ig_Siglec_N Immunoglobulin (Ig) domain at the N terminus of Siglec (sialic acid-binding Ig-like lectins)

Probab=96.54  E-value=0.013  Score=50.90  Aligned_cols=66  Identities=14%  Similarity=0.185  Sum_probs=44.7

Q ss_pred             CCCceEEecCCCeEEEEEEccCC------CCeEEEeeCCccc-----c---C--------CCCceee------cceEEEE
Q psy8771         111 PPALLEVMLDSPLNLSCVAVGSP------MPFVKWRKGQNIE-----L---T--------PDDKLPV------GRNVLTL  162 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~~g~p------~p~i~W~k~~~~~-----~---~--------~~~~~~~------~~~~l~i  162 (904)
                      |.. +.+.+|+.++|.|......      ...+.|+|.....     .   .        ...|+..      ++.+|.|
T Consensus         6 P~~-v~~~~G~~VtL~C~f~~~~~~~~~~~~~~~Wykq~~g~~~~~~~~~~~~~~~~~~~f~gR~~~~~~~~~~~~sL~I   84 (119)
T cd05712           6 PKS-VSVQEGLCVLIPCSFSYPADWPVSNGVHGIWYKGHPYPKNRPPVATNNRSRLVHESTRGRFRLLGDLGKKNCSLLI   84 (119)
T ss_pred             CCE-EEEeccccEEEEEEeeCcccccCCCceEEEEEeCCCCCCCCCcEEEcCCCccccccccccEEEecCCCCCEEEEEE
Confidence            344 8999999999999876332      3468999852211     0   0        0124432      2347999


Q ss_pred             eee--cCCeEEEEEEEe
Q psy8771         163 DRV--TESENYTCIAAS  177 (904)
Q Consensus       163 ~~l--~d~g~Y~c~a~n  177 (904)
                      .++  +|+|.|.|++..
T Consensus        85 ~~l~~~Dsg~Y~C~~~~  101 (119)
T cd05712          85 SDAQPEDSGKYFFRVEL  101 (119)
T ss_pred             ccCChhhCeEEEEEEEc
Confidence            999  699999998865

Ig_Siglec_N: immunoglobulin (Ig) domain at the N terminus of Siglec (sialic acid-binding Ig-like lectins). Siglec refers to a structurally related protein family that specifically recognizes sialic acid in oligosaccharide chains of glycoproteins and glycolipids. Siglecs are type I transmembrane proteins, organized as an extracellular module composed of Ig-like domains (an N-terminal variable set of Ig-like carbohydrate recognition domains, and 1 to 16 constant Ig-like domains), followed by transmembrane and short cytoplasmic domains. Human siglecs are classified into two subgroups, one subgroup is comprised of sialoadhesin (Siglec-1), CD22 (Siglec-2), and MAG, the other subgroup is comprised of CD33-related Siglecs which include CD33 (Siglec-3) and human Siglecs 5-11.

>KOG4806|consensus

Probab=96.52  E-value=0.16  Score=50.14  Aligned_cols=258  Identities=16%  Similarity=0.196  Sum_probs=125.6

Q ss_pred             ccCCCCceeeeeccCCeEEEEEEEEeeCCCC-CCCCCCceeeecCCCCCCCCCCe--------EEEecCCceEEEEecCC
Q psy8771         435 QYGKTPGFGEQALYPNTLYYIWLAAQSPRGE-GATTPPIPVRTKQYEPGTAPRDV--------QVRPLSSSTMVIQWDEP  505 (904)
Q Consensus       435 ~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~-~~~s~~~~~~t~~~~p~~~p~~l--------~v~~~~~~~~~l~W~~p  505 (904)
                      ..+....+++..|.|.+.|.|.|...+.... +..-......|.+.+. .+|..|        .+.. ....=.++...|
T Consensus       165 Cig~~n~~~v~~L~pdt~Y~~dvFvv~~~r~~sTay~~t~~~t~e~~k-Qk~~~Lk~g~l~qv~v~~-~kG~kf~~f~~p  242 (454)
T KOG4806|consen  165 CIGNKNIFTVSDLKPDTQYYFDVFVVNINRNMSTAYVGTFARTKEEAK-QKTVELKDGKLTQVFVKG-RKGAKFLSFKVP  242 (454)
T ss_pred             EcCCccEEEhhhcCCCceEEEEEEEEecCCCcceeeeeeehhhhhhhc-CCceeeccCcEEEEEecc-cccceEEEecCc
Confidence            3456667899999999999999999885432 2221122233333221 111111        1111 112223444544


Q ss_pred             CC--CCCceeeEEEEEEeCCCCCC----cceE---EEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEe--
Q psy8771         506 ET--PNGQITGYKVYYTQDQSLPM----SAWE---TQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVK--  574 (904)
Q Consensus       506 ~~--~~~~i~~Y~v~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~--  574 (904)
                      +.  ..+......|.-+. +....    ..|.   .....+.+.+.-.++.++..|.++++..|.+..- ....+...  
T Consensus       243 q~~~~l~qp~mhllh~C~-g~vrinl~R~rkel~kS~af~g~~~~~Qfvv~~~~~~~~rf~~~ndde~~-~~v~V~aSt~  320 (454)
T KOG4806|consen  243 QTTRSLGQPFMHLLHSCL-GEVRINLLRQRKELGKSEAFYGPTYIRQFVVLPGERYLMRFEPSNDDEAL-QKVMVAASTE  320 (454)
T ss_pred             chhhhcCCceeeeeeccc-ccceeehhhchhhhcccccccCceeeeEEEecCCCceEEEEEecCCchhh-heeEeeeecc
Confidence            32  12211112221111 11000    0000   1111233334455778999999999999876431 11111111  


Q ss_pred             -cCCCCCCCCCCceEEecC--CCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCce
Q psy8771         575 -TQQGVPSQPRDLRAVDIQ--ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENI  651 (904)
Q Consensus       575 -t~~~~p~~p~~~~~~~~~--~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~  651 (904)
                       |....|.-|.+..+..+.  -++.++.|....+   .-..|.|+..+.+. ...+.+   ..+....-..     ....
T Consensus       321 ~t~~~~P~LP~dTtVk~v~r~CSsAtIaW~gs~d---~~~kyCIy~~~~~~-~e~~v~---~~~N~C~g~~-----~~~~  388 (454)
T KOG4806|consen  321 ATFRDLPELPQDTTVKNVRRRCSSATIAWNGSPD---EELKYCIYVFNLPQ-RERSVV---DFTNYCMGFV-----PKRV  388 (454)
T ss_pred             cccCcCCCCCCCceEeeeccccchheeeeccCcc---hheeEEEEEecccc-hhhhhh---hhhccccCcc-----ccce
Confidence             233456778887777664  4578999987754   35567777655443 111110   0000000000     1122


Q ss_pred             eeEEEE-EEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEe
Q psy8771         652 ISYELY-WNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT  711 (904)
Q Consensus       652 ~~y~v~-~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t  711 (904)
                      ..|... |....+.   .....+..+-+|.||.||..|.+.|.|.-..|..-+-..+.+.|
T Consensus       389 s~~v~c~y~hs~~~---q~~~~~i~teTI~gL~PgssYlldv~a~~~~g~~lpyqa~~v~t  446 (454)
T KOG4806|consen  389 SQYVYCEYMHSRER---QQSPDNIETETILGLMPGSSYLLDVTANLSMGKPLPYQALTVHT  446 (454)
T ss_pred             eEEEeEEEecChhh---hcchhhhhhhhhcccccCceEEEEEEEcccCCccccceeEEEEe
Confidence            333333 2222111   11122334667899999999999999988876654333333433

>KOG4152|consensus

Probab=96.50  E-value=0.014  Score=60.41  Aligned_cols=124  Identities=19%  Similarity=0.323  Sum_probs=84.2

Q ss_pred             eeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCC-CceeeEEEEEEe
Q psy8771         443 GEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN-GQITGYKVYYTQ  521 (904)
Q Consensus       443 ~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~-~~i~~Y~v~~~~  521 (904)
                      .-..|.+|+.|+|+|.|.|+.|.++++....+.|-...-|.+|..+++. .+-..+.+.|++|...+ |.|..|..+..-
T Consensus       650 ~k~~lv~Gq~yrfrV~aIng~G~gp~s~i~~~kTc~pG~P~apS~~ri~-k~~eGi~l~weppt~p~sg~Iieys~ylAi  728 (830)
T KOG4152|consen  650 VKTSLVTGQAYRFRVTAINGKGPGPASTILKLKTCAPGKPTAPSGARIK-KTIEGISLVWEPPTKPGSGTIIEYSPYLAI  728 (830)
T ss_pred             cccccccccceeeeeeeeeccCCCchhhheeeeeccCCCCCCccccccc-ccccceeecccCCCCCCCcceEEeehhhHh
Confidence            4568899999999999999999999999999888766666778777654 34468999999987664 577777765432


Q ss_pred             CC-----CCCCcceEEEeecCceEE---------EEcCCCCCCeEEEEEEEEeCCCCCCC
Q psy8771         522 DQ-----SLPMSAWETQVVDNNQLT---------TISDLTPHTIYTIRVQAFTSVGPGPL  567 (904)
Q Consensus       522 ~~-----~~~~~~~~~~~~~~~~~~---------~~~~L~p~t~Y~~~V~a~~~~g~~~~  567 (904)
                      ..     ......+.....+-.+.+         .+.+...+..-.|+|.|.|..|.|+.
T Consensus       729 ~tq~~~~~~sql~fmr~ycg~~t~c~vt~g~l~tA~~d~t~~paivfri~aknekGyGpa  788 (830)
T KOG4152|consen  729 ITQAGATGVSQLPFMRSYCGIITTCVVTSGKLITAVPDITTGPAIVFRIVAKNEKGYGPA  788 (830)
T ss_pred             hhhhhccCccccceeeeecccceeeEEecccceeeccccccCcceEEEEEecCCCCCCcc
Confidence            11     111111222222222222         23344556778899999999887754

>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology

Probab=96.50  E-value=0.0067  Score=51.48  Aligned_cols=88  Identities=26%  Similarity=0.365  Sum_probs=56.5

Q ss_pred             CCCCCeEEEecCCceEEEEecCCC-----CCCC----c---eeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCC
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPE-----TPNG----Q---ITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHT  550 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~-----~~~~----~---i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t  550 (904)
                      +||. +.+ ....++|.|.+.+|.     ....    +   ...|.|.++..++.   .-..........+.|.+|.|++
T Consensus         4 gPP~-v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~---~~~~~~~~~~~~~~l~~L~p~t   78 (106)
T PF09294_consen    4 GPPS-VNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSN---EKKKEIETKNSSVTLSDLKPGT   78 (106)
T ss_dssp             -SSE-EEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTS---CEEEEEESSSEEEEEES--TTS
T ss_pred             cCCE-EEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCc---cceEEEeecCCEEEEeCCCCCC
Confidence            4565 777 456689999999986     1111    1   25699999988754   1223344666778999999999


Q ss_pred             eEEEEEEEEeCC--CCCCCCCcEEEec
Q psy8771         551 IYTIRVQAFTSV--GPGPLSAPVLVKT  575 (904)
Q Consensus       551 ~Y~~~V~a~~~~--g~~~~S~~~~~~t  575 (904)
                      .|.|+|++....  ..|.+|.+..+.|
T Consensus        79 ~YCv~V~~~~~~~~~~s~~S~~~C~~t  105 (106)
T PF09294_consen   79 NYCVSVQAFSPSQNKNSQPSEPQCITT  105 (106)
T ss_dssp             EEEEEEEEEECSSTEEEEEBSEEEEE-
T ss_pred             CEEEEEEEEeccCCCcCCCCCCEeEeC
Confidence            999999994332  2356677666554

They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....

>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology

Probab=96.49  E-value=0.013  Score=49.77  Aligned_cols=88  Identities=24%  Similarity=0.377  Sum_probs=57.0

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCC----CCCc------cEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCce
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVE----RSNG------HIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTE  787 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~----~~~g------~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~  787 (904)
                      ||. +.+ ....++|.|.+..|...    ..+.      .-..|.|.|+..++..   ...... ....+.|.+|.|++.
T Consensus         5 PP~-v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~~---~~~~~~~~~~~~~l~~L~p~t~   79 (106)
T PF09294_consen    5 PPS-VNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSNE---KKKEIETKNSSVTLSDLKPGTN   79 (106)
T ss_dssp             SSE-EEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTSC---EEEEEESSSEEEEEES--TTSE
T ss_pred             CCE-EEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCcc---ceEEEeecCCEEEEeCCCCCCC
Confidence            455 777 45789999999998410    0110      1257999999988651   223333 667779999999999


Q ss_pred             EEEEEEEeeC--CCCCCCCCcEEeec
Q psy8771         788 YRIWVLAGTS--IGDGPSSYPITIRT  811 (904)
Q Consensus       788 Y~~~V~a~~~--~g~g~~s~~~~~~t  811 (904)
                      |-|+|+|...  ...|.+|.+..+.|
T Consensus        80 YCv~V~~~~~~~~~~s~~S~~~C~~t  105 (106)
T PF09294_consen   80 YCVSVQAFSPSQNKNSQPSEPQCITT  105 (106)
T ss_dssp             EEEEEEEEECSSTEEEEEBSEEEEE-
T ss_pred             EEEEEEEEeccCCCcCCCCCCEeEeC
Confidence            9999999332  23567777666655

They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....

>cd07700 IgV_CD8_beta Immunoglobulin (Ig) like domain of CD8 beta chain

Probab=96.41  E-value=0.013  Score=49.62  Aligned_cols=63  Identities=24%  Similarity=0.508  Sum_probs=42.6

Q ss_pred             eEEecCCCeEEEEEEccCC-CCeEEEeeCCccc----c------C-----------CCCceee------cceEEEEeee-
Q psy8771         115 LEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIE----L------T-----------PDDKLPV------GRNVLTLDRV-  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~----~------~-----------~~~~~~~------~~~~l~i~~l-  165 (904)
                      +.+.+|++++|.|.+.+.. ...+.|++-....    +      .           ...|+..      ....|.|.++ 
T Consensus         1 ~~v~~G~~vtL~C~~~~~~~~~~~~Wyrq~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~rf~~~~~~~~~~~~L~I~~~~   80 (107)
T cd07700           1 ILVQTNNTVKLSCEAKGISENTRIYWLRWRQAPKDSHFEFLALWSPLGGATYGEEVSQEKFSIRVTSDSSRYRLHINRVK   80 (107)
T ss_pred             CEEcCCCCEEEEEEEecCCCCCeEEEEEECCCCCCCccEEEEEEcCCCCeEEccccccCcEEEEEECCCCEEEEEECCCC
Confidence            3578999999999998754 4579999842220    0      0           0123432      1236999999 


Q ss_pred             -cCCeEEEEEEEe
Q psy8771         166 -TESENYTCIAAS  177 (904)
Q Consensus       166 -~d~g~Y~c~a~n  177 (904)
                       +|+|.|.|...+
T Consensus        81 ~~Dsg~YyCa~~~   93 (107)
T cd07700          81 PEDSGTYFCMTVG   93 (107)
T ss_pred             HHHCEEEEEeEcC
Confidence             699999998753

IgV_CD8_beta: immunoglobulin (Ig)-like domain in CD8 beta. The CD8 glycoprotein plays an essential role in the control of T-cell selection, maturation and the T-cell receptor (TCR)-mediated response to peptide antigen. CD8 is comprised of alpha and beta subunits and is expressed as either an alpha/alpha or alpha/beta dimer. Both dimeric isoforms can serve as a coreceptor for T cell activation and differentiation, however they have distinct physiological roles, different cellular distributions, unique binding partners etc. Each CD8 subunit is comprised of an extracellular domain containing a V-type Ig-like domain, a single pass transmembrane portion and a short intracellular domain.

>TIGR00864 PCC polycystin cation channel protein

Probab=96.27  E-value=6.5  Score=51.56  Aligned_cols=264  Identities=11%  Similarity=0.077  Sum_probs=127.8

Q ss_pred             ccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc
Q psy8771          73 RSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK  152 (904)
Q Consensus        73 ~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~  152 (904)
                      .|.+.+.+.+.+ .+......+.+.++...    +.....+ ..+..|+.++|++.....+...+.|..+++....    
T Consensus      1841 ~ytV~L~AsN~v-s~~~~s~~~~VQe~I~~----L~L~as~-~~~~~n~~v~fsa~l~~GS~Vtf~w~fGdgs~~~---- 1910 (2740)
T TIGR00864      1841 TFAIRLNASNAV-SGKSASREFFAEEPIFG----LELKASK-KIAAIGEKVEFQILLAAGSAVNFRLQIGGAAPEV---- 1910 (2740)
T ss_pred             EEEEEEEEEccc-CcceeeeeEEEEEecce----EEEeccc-ccccCCCEEEEEEEecCCCceEEEEEeCCCCcee----
Confidence            444454554444 44444444555443222    2222333 6677999999999888777888899987443221    


Q ss_pred             eeecceEEEEeee-cCCeEEEE--EEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEe--------ecCCeEEEEE
Q psy8771         153 LPVGRNVLTLDRV-TESENYTC--IAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE--------VTATSVRLDW  221 (904)
Q Consensus       153 ~~~~~~~l~i~~l-~d~g~Y~c--~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~--------~~~~sv~l~W  221 (904)
                        ...+ ..+... ..-|.|.+  .|.|..+...+...+.|.+.          ...|++..        .....+...+
T Consensus      1911 --~t~~-~t~~HsY~~~G~Y~VtV~A~N~Vs~~~a~~~V~Vle~----------V~gL~I~~~c~~~~~~g~~~tF~A~v 1977 (2740)
T TIGR00864      1911 --LQPG-PRFSHSFPRVDDHMVNLRAKNEVSCAQANLHIEVLEA----------VRGLQIPDCCAAGIATGEEKNFTANV 1977 (2740)
T ss_pred             --ecCC-CeEEeecCCCCcEEEEEEEEeccceeeeeEEEEEEEe----------ccceEecCCcccceecCceEEEEEEE
Confidence              1111 123333 56678865  77888888777766666522          12222211        1122233333


Q ss_pred             eCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCC--------C
Q psy8771         222 TYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET--------E  293 (904)
Q Consensus       222 ~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~--------~  293 (904)
                      .. +. ...|.+.+......+.......+.+-.++.  ..+| .|.++|+|.|..|...  ....+.....        .
T Consensus      1978 ~~-g~-~V~f~W~f~~~~~~g~~~~~~~G~~vty~~--~~~G-~~~I~v~A~N~l~s~n--~t~~i~VQ~~i~~~~L~~~ 2050 (2740)
T TIGR00864      1978 QR-GK-PVAFAWTFDLHHLHGDSLVIHMGKDVSYTA--EAAG-LLEIQLGAFNALGAEN--ITLQLEAQDALMDAALQAG 2050 (2740)
T ss_pred             ec-CC-ceEEEEEeeecccCCCcceeecCCceEEcc--CCCc-EEEEEEEEEcccCccc--ccEEEEEEeheeeEEEeec
Confidence            21 22 223555444221111111122222233444  3455 7999999999988643  2222221110        0


Q ss_pred             C----CCCCCceEecc-cCCCeeEEEecCCCCCCceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCC
Q psy8771         294 P----GTAPRDVQVRP-LSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP  368 (904)
Q Consensus       294 p----~~~p~~l~~~~-~~~~~v~l~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~  368 (904)
                      |    ......+.+.. .+.+.+...|+-.+......        ...........++| .|.++|.|.|..........
T Consensus      2051 p~~~~~n~~v~f~~~~~~~~~~v~~~WDFGDGt~~~~--------T~~~~~sHtY~r~G-~Y~V~V~a~N~VS~~~a~~~ 2121 (2740)
T TIGR00864      2051 PQDCFTNKMAQFEAATSPKPNFMACHWDFGDGSAGQD--------TDEPRAEHEYLHPG-DYRVQVNASNLVSFFSAHAE 2121 (2740)
T ss_pred             CcceecCceEEEEEEEccCCCcEEEEEEecCCCCccc--------cCCceeEEEecCCc-cEEEEEEEEcceeeeeeEEE
Confidence            0    01111222211 12445777776543322211        11122333444554 69999999997765544444


Q ss_pred             cceeecc
Q psy8771         369 IPVRTKQ  375 (904)
Q Consensus       369 ~~~~t~~  375 (904)
                      +.+....
T Consensus      2122 i~V~vl~ 2128 (2740)
T TIGR00864      2122 INVQVLA 2128 (2740)
T ss_pred             EEEEEec
Confidence            4444433

Note: this model has been restricted to the amino half because for technical reasons.

>COG4733 Phage-related protein, tail component [Function unknown]

Probab=96.27  E-value=0.041  Score=61.10  Aligned_cols=145  Identities=16%  Similarity=0.126  Sum_probs=80.9

Q ss_pred             eeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCC-C--CCcEEEecCCCCCCCCCCceEE
Q psy8771         513 TGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGP-L--SAPVLVKTQQGVPSQPRDLRAV  589 (904)
Q Consensus       513 ~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~-~--S~~~~~~t~~~~p~~p~~~~~~  589 (904)
                      ..+.+.|....+.   .|..........+.+.+|-+| .|.++|+|+|..|... +  |....+.-+..+|..+..+...
T Consensus       637 f~~~~a~~a~~~~---~~vta~rt~~~~~~~~gi~~G-qY~i~VrAiN~~g~~~~~a~s~~f~i~g~~~Ppp~~~t~~a~  712 (952)
T COG4733         637 FLAAWAYEAGWDG---NWITAPRTSAAGFDVEGIPAG-QYAIRVRAINVFEPNSPDATAYEFALNGKKVPPPKAMIYDAV  712 (952)
T ss_pred             HHHHHHhhcccCC---ceEecccccccceeecCcCcc-ceEEEEEEeeccCCCCCCcceeEEEecCCCCCCCcccccceE
Confidence            3344444444322   455555567778999999995 8999999999988542 2  2222222233333333333333


Q ss_pred             ecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE
Q psy8771         590 DIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR  669 (904)
Q Consensus       590 ~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~  669 (904)
                      .+ .-.+.|.|-.|..                                          .-.+..-.+++....+.+....
T Consensus       713 ~i-t~~~~l~v~dPt~------------------------------------------~~d~~~sei~~s~~~d~~~~Ar  749 (952)
T COG4733         713 II-TLVIRLVVGDPTG------------------------------------------AVDITSTEIRSAVIADGNFQAR  749 (952)
T ss_pred             EE-EeeeeEEEecCCc------------------------------------------ceEEeeeeeeeeccccchhHHh
Confidence            32 2245677766631                                          2223333444444433333222


Q ss_pred             Eecccc--eEEEeCCCCCcEEEEEEEEEcCCCCCCCC
Q psy8771         670 RIGLVE--TYSLTGLYPNTLYYIWLAAQSPRGEGATT  704 (904)
Q Consensus       670 ~~~~~~--~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s  704 (904)
                      ..+...  ...-.+|+++..|.|+++++|..|...+-
T Consensus       750 ~LG~~~~~~~~~~~i~~g~~~~F~~R~Vn~vG~~~~~  786 (952)
T COG4733         750 SLGNLNYPGLFSVGIQAGLTFWFRNRNVDLVGNNDKW  786 (952)
T ss_pred             hhhccccccccccCcCCCceEEEEeeecccccccccc
Confidence            222222  11226999999999999999999886543

>cd07699 IgC_L Immunoglobulin Constant domain

Probab=96.25  E-value=0.015  Score=48.46  Aligned_cols=63  Identities=17%  Similarity=0.326  Sum_probs=41.8

Q ss_pred             eEEecCCCeEEEEEEcc-CC-CCeEEEeeCCccccCCCCc----eeecceEEEEeee--------cCCeEEEEEEEec
Q psy8771         115 LEVMLDSPLNLSCVAVG-SP-MPFVKWRKGQNIELTPDDK----LPVGRNVLTLDRV--------TESENYTCIAASV  178 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g-~p-~p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~l--------~d~g~Y~c~a~n~  178 (904)
                      .....++.++|.|.+.| .| ...|+|++| |..+..+..    ....++++.+...        .++..|+|.+...
T Consensus        12 ~~~~~~~~~~L~C~~~gfyP~~i~v~W~~~-g~~~~~~~~~~~~~~~~dgty~~~s~L~v~~~~w~~~~~~sC~V~H~   88 (100)
T cd07699          12 EELEKSGKATLVCLINDFYPGFATVQWKVD-GATVSSGVQTSTTEQQSDNTYSLSSYLTLTKSDWNKHKVYTCEVTHE   88 (100)
T ss_pred             HHHccCCCcEEEEEEEeEECCCCEEEEEEC-CEECcccEeccccEECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEec
Confidence            34446788999999999 56 468999999 666543211    2223666665443        2478899998754

IgC_L: Immunoglobulin (Ig) light chain constant (C) domain. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. In Ig, each chain is composed of one variable domain (IgV) and one or more constant domains (IgC); these names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. There are five types of heavy chains (alpha, gamma, delta, epsilon, and mu), which determine the type of immunoglobulin: IgA, IgG, IgD, IgE, and IgM, respectively. In higher vertebrates, there are two types of light chain, designated kappa and lambda, which seem to be functionally identical, and can associate with any of the heavy chains.

>cd05889 Ig1_DNAM-1_like First immunoglobulin (Ig) domain of DNAX accessory molecule 1 (DNAM-1, also known as CD226) and similar proteins

Probab=96.24  E-value=0.042  Score=45.02  Aligned_cols=67  Identities=16%  Similarity=0.280  Sum_probs=43.1

Q ss_pred             CCeEEEEEEccC-CCCeEEEeeCCcc---cc-------------CCCCceee-----cceEEEEeee--cCCeEEEEEEE
Q psy8771         121 SPLNLSCVAVGS-PMPFVKWRKGQNI---EL-------------TPDDKLPV-----GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       121 ~~~~l~C~~~g~-p~p~i~W~k~~~~---~~-------------~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      +.++|.|..... ....|+|.|-.+.   .+             ....|+..     .+.+|.|.|+  +|+|.|+|.+.
T Consensus         1 ~~vtL~C~~~~~~~~~qV~W~k~~~~~~~~iavy~~~~g~~~~~~y~~Rv~f~~~~~~d~sI~i~nvt~~D~G~Y~C~~~   80 (96)
T cd05889           1 EKMKLECVYPKTGVLIQVSWTKHNGSHKENIAVYHPIYGMHIEDKYRGRVYFLNSTREDMSLSFNNATEEDVGLYCCSLV   80 (96)
T ss_pred             CCEEEEeEcCCCCcEEEEEEEEcCCCCCceEEEEECCCCCEECccccCeEEEecCCCCccEEEEcCCCcccCEEEEEEEE
Confidence            468899998743 3357889984221   11             11134443     3579999999  79999999876


Q ss_pred             e-cCcceEEEEE
Q psy8771         177 S-VLGVIETSTI  187 (904)
Q Consensus       177 n-~~g~~~~~~~  187 (904)
                      . ..|..++.+.
T Consensus        81 t~P~g~~~~~i~   92 (96)
T cd05889          81 TYPQGSWEKVIE   92 (96)
T ss_pred             eCCCCCeEEEEE
Confidence            5 3565555443

Ig1_DNAM-1_like: domain similar to the first immunoglobulin (Ig) domain of DNAX accessory molecule 1 (DNAM-1, also known as CD226). DNAM-1 is a transmembrane protein having two Ig-like domains. It is an adhesion molecule which plays a part in tumor-directed cytotoxicity and adhesion in natural killer (NK) cells and T lymphocytes. It has been shown to regulate the NK cell killing of several tumor types, including myeloma cells and ovarian carcinoma cells. DNAM-1 interacts specifically with poliovirus receptor (PVR; CD155) and nectin -2 (CD211), other members of the Ig superfamily. DNAM-1 is expressed in most peripheral T cells, NK cells, monocytes and a subset of B lymphocytes.

>cd00096 Ig Immunoglobulin domain

Probab=96.22  E-value=0.023  Score=43.52  Aligned_cols=56  Identities=32%  Similarity=0.644  Sum_probs=41.1

Q ss_pred             eEEEEEEccCCCCeEEEeeCCccccCCCC--------ceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         123 LNLSCVAVGSPMPFVKWRKGQNIELTPDD--------KLPVGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       123 ~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--------~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      +.|.|.+.+.+...+.|+++ +.......        ........|.|.++  .|+|.|.|.+.+..
T Consensus         1 ~~l~C~~~~~~~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~   66 (74)
T cd00096           1 VTLTCLASGPPPPTITWLKN-GKPLPSSVLTRVRSSRGTSSGSSTLTISNVTLEDSGTYTCVASNSA   66 (74)
T ss_pred             CEEEEEecCCCCCcEEEEEC-CEECCCcccEEeccccCcceeEEEEEECccCcccCcEEEEEEecCc
Confidence            47899999988889999998 43332221        12234567888888  59999999998765

Ig: immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of this group are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as, T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as, butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05735 Ig8_DSCAM Eight immunoglobulin (Ig) domain of Down Syndrome Cell Adhesion molecule (DSCAM)

Probab=96.22  E-value=0.033  Score=45.13  Aligned_cols=73  Identities=10%  Similarity=0.118  Sum_probs=46.5

Q ss_pred             eEEEeecCCeEEEEEeCCCccc----eEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771         207 VKISEVTATSVRLDWTYPSETL----LYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS  282 (904)
Q Consensus       207 l~~~~~~~~sv~l~W~~~~~~~----~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s  282 (904)
                      |.+...+...+.+.|...+..+    ..|.+.....         .......+.|.++...+.+.|+|.|.|..|.....
T Consensus         6 l~C~~~g~p~~~i~W~k~~~~i~~~~~r~~~~~~~~---------~~~~~s~L~I~~~~~~D~G~YtC~A~N~~G~~~~~   76 (88)
T cd05735           6 MSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTKEV---------GDEVISTLQILPTVREDSGFFSCHAINSYGEDRGI   76 (88)
T ss_pred             EEEEEECCCCCEEEEeeCCEECCCCCCcEEEEEecC---------CCcEEEEEEECCCCcccCEEEEEEEEcCCCcceEE
Confidence            4455555666788887764322    1233322211         01223679999999999999999999999986544


Q ss_pred             CCeEEe
Q psy8771         283 SPAVIT  288 (904)
Q Consensus       283 ~~~~~~  288 (904)
                      ..+.+.
T Consensus        77 ~~L~V~   82 (88)
T cd05735          77 IQLTVQ   82 (88)
T ss_pred             EEEEEe
Confidence            444443

Ig8_DSCAM: the eight immunoglobulin (Ig) domain of Down Syndrome Cell Adhesion molecule (DSCAM). DSCAM is a cell adhesion molecule expressed largely in the developing nervous system. The gene encoding DSCAM is located at human chromosome 21q22, the locus associated with the mental retardation phenotype of Down Syndrome. DSCAM is predicted to be the largest member of the IG superfamily. It has been demonstrated that DSCAM can mediate cation-independent homophilic intercellular adhesion.

>PHA03376 BARF1; Provisional

Probab=96.11  E-value=0.064  Score=48.32  Aligned_cols=66  Identities=15%  Similarity=0.143  Sum_probs=45.1

Q ss_pred             eEEecCCCeEEEEEEc---cCCCCeEEEeeCCc----ccc------------CCCCceee----cceEEEEeee--cCCe
Q psy8771         115 LEVMLDSPLNLSCVAV---GSPMPFVKWRKGQN----IEL------------TPDDKLPV----GRNVLTLDRV--TESE  169 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~---g~p~p~i~W~k~~~----~~~------------~~~~~~~~----~~~~l~i~~l--~d~g  169 (904)
                      +++..|+++.|.|...   ..+...|+|+|.+.    ..+            +...++.+    ++-+|.|.++  +|+|
T Consensus        21 Vta~VGEda~LsC~lnp~ssa~~MrIrWqKs~p~~~~VvL~~~ggdVv~~QmEyRGrtD~~~~~gnvsLvI~~l~lSDdG  100 (221)
T PHA03376         21 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDG  100 (221)
T ss_pred             hhheeCCcEEEEecccCccCCCceEEEEEecCCCCCCEEEEEcCCeeeeeeeccccEEEEEecCCeEEEEEEeeeecCCc
Confidence            7888999999999876   34556899999421    111            12222322    3457888888  7999


Q ss_pred             EEEEEEEecCc
Q psy8771         170 NYTCIAASVLG  180 (904)
Q Consensus       170 ~Y~c~a~n~~g  180 (904)
                      .|+|...-...
T Consensus       101 tY~C~fQkge~  111 (221)
T PHA03376        101 NYLCRMKLGET  111 (221)
T ss_pred             eEEEEEEcCCC
Confidence            99998875443

>cd05767 IgC_MHC_II_alpha Class II major histocompatibility complex (MHC) alpha chain immunoglobulin domain

Probab=95.99  E-value=0.04  Score=44.99  Aligned_cols=58  Identities=24%  Similarity=0.367  Sum_probs=37.9

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCc----eeecceEEEEeee-----cCCeEEEEEEEe
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDK----LPVGRNVLTLDRV-----TESENYTCIAAS  177 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~l-----~d~g~Y~c~a~n  177 (904)
                      .++.++|.|.+.| .|. ..|+|.+| |..+..+..    ....++++.+...     .++..|+|.+.-
T Consensus        14 ~~~~~tL~C~a~gFyP~~I~v~W~~~-g~~~~~~~~~~~~~~~~Dgty~~~s~L~v~~~~~~~ytC~V~H   82 (94)
T cd05767          14 LGEPNTLICFVDNFFPPVLNVTWLKN-GVPVTDGVSETRYYPRQDLSFQKFSYLNFTPEEGDIYSCIVEH   82 (94)
T ss_pred             CCCCeEEEEEEEEEECCcCEEEEEEC-CeEccCceEEeeeEeCCCCcEEEEEEEEEECCCCCeEEEEEEe
Confidence            4566899999999 565 57899999 666544321    1224555554322     466789998864

IgC_MHC_II_alpha: Immunoglobulin (Ig) domain of major histocompatibility complex (MHC) class II alpha chain. MHC class II molecules play a key role in the initiation of the antigen-specific immune reponse. In both humans and in mice these molecules have been shown to be expressed constitutively on the cell surface of professional antigen-presenting cells (APCs), for example on B-lymphocytes, monocytes, and macrophages. The expression of these molecules has been shown to be induced in nonprofessional APCs such as keratinocyctes, and they are expressed on the surface of activated human T cells and on T cells from other species. The MHC II molecules present antigenic peptides to CD4(+) T-lymphocytes. These peptides derive mostly from protelytic processing via the endocytic pathway, of antigens internalized by the APC. These peptides bind to the MHC class II molecules in the endosom

>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R

Probab=95.98  E-value=0.034  Score=47.05  Aligned_cols=79  Identities=23%  Similarity=0.336  Sum_probs=57.9

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEEEcCCC--CCCeEEEE
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTTISDLT--PHTIYTIR  555 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~--p~t~Y~~~  555 (904)
                      ...+|.++++...+ -...|.|+++... ..-..|.|+|+...   ...|+...   ....+.+.++...  +...|.++
T Consensus        21 ~lp~P~nv~~~s~n-f~~iL~W~~~~~~-~~~~~ytVq~~~~~---~~~W~~v~~C~~i~~~~Cdlt~~~~~~~~~Y~~r   95 (107)
T PF01108_consen   21 SLPAPQNVTVDSVN-FKHILRWDPGPGS-PPNVTYTVQYKKYG---SSSWKDVPGCQNITETSCDLTDETSDPSESYYAR   95 (107)
T ss_dssp             SGSSCEEEEEEEET-TEEEEEEEESTTS-SSTEEEEEEEEESS---TSCEEEECCEEEESSSEEECTTCCTTTTSEEEEE
T ss_pred             cCCCCCeeEEEEEC-CceEEEeCCCCCC-CCCeEEEEEEEecC---CcceeeccceecccccceeCcchhhcCcCCEEEE
Confidence            34688999998876 5689999995433 35588999999433   25677662   2455788887754  78899999


Q ss_pred             EEEEeCCCC
Q psy8771         556 VQAFTSVGP  564 (904)
Q Consensus       556 V~a~~~~g~  564 (904)
                      |+|..+...
T Consensus        96 V~A~~~~~~  104 (107)
T PF01108_consen   96 VRAEVGNQT  104 (107)
T ss_dssp             EEEEETTEE
T ss_pred             EEEEeCCcc
Confidence            999987543

...

>PF08205 C2-set_2: CD80-like C2-set immunoglobulin domain ; InterPro: IPR013162 The basic structure of immunoglobulin (Ig) molecules is a tetramer of two light chains and two heavy chains linked by disulphide bonds

Probab=95.94  E-value=0.019  Score=46.77  Aligned_cols=64  Identities=19%  Similarity=0.271  Sum_probs=37.5

Q ss_pred             EEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCC-Cce--eecc------eEEEEeee--cCCeEEEEEEEecCc
Q psy8771         116 EVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPD-DKL--PVGR------NVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       116 ~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~-~~~--~~~~------~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      ....|+.+.|.|.+. |.|.|.|+|+.+ +..+... ...  ...+      ..|.+.--  .++..++|.|.+..-
T Consensus        10 ~~~~~~~~~~~C~s~~~~P~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~~S~l~~~~~~~~~~~~~~C~~~~~~~   85 (89)
T PF08205_consen   10 LEGEGEEVTLTCSSSGGYPPPQITWYLD-GGPVVASNTTQSSSPDNGLFTVSSTLTLTPTREDHGKTLTCRASHPAL   85 (89)
T ss_dssp             EESSTEEEEEEEEEEEEBS-EEEEEEET-TCEECEEEEEEEEETTTTTEEEEEEEEEETTGGGTTEEEEEEEEETTC
T ss_pred             EcccceEEEEEEEeCCeECCeEEEEEEC-CCceeeeeeeeeeccCCCcceEEEEEEEEcChHHCCeEEEEEEECCcc
Confidence            333478999999666 689999999999 4433110 000  1111      12333221  267888999988654

There are two types of light chains: kappa and lambda, each composed of a constant domain (CL) and a variable domain (VL). There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are highly modular proteins, in which the variable and constant domains have clear, conserved sequence patterns. The domains in Ig and Ig-like molecules are grouped into four types: V-set (variable; IPR013106 from INTERPRO), C1-set (constant-1; IPR003597 from INTERPRO), C2-set (constant-2; IPR008424 from INTERPRO) and I-set (intermediate; IPR013098 from INTERPRO) []. Structural studies have shown that these domains share a common core Greek-key beta-sandwich structure, with the types differing in the number of strands in the beta-sheets as well as in their sequence patterns [, ]. Immunoglobulin-like domains that are related in both sequence and structure can be found in several diverse protein families. Ig-like domains are involved in a variety of functions, including cell-cell recognition, cell-surface receptors, muscle structure and the immune system []. This entry represents the C2-set type domains found in the T-cell antigen CD80, as well as in related proteins. CD80 (B7-1) is a glycoprotein expressed on antigen-presenting cells []. The shared ligands on CD80 and CD86 (B7-2) deliver the co-stimulatory signal through CD28 and CTLA-4 on T-cells, where CD28 augments the T-cell response and CTLA-4 attenuates it [].; PDB: 3S58_A 3O3U_N 3CJJ_A 3S59_A 2PF6_B 2PET_A 3ALP_A 3SKU_D 3U83_A 3U82_B ....

>cd05720 Ig_CD8_alpha Immunoglobulin (Ig) like domain of CD8 alpha chain

Probab=95.92  E-value=0.027  Score=47.38  Aligned_cols=62  Identities=21%  Similarity=0.288  Sum_probs=42.2

Q ss_pred             EEecCCCeEEEEEEccCCCCeEEEeeCCcc---cc------CC------------CCceee----cceEEEEeee--cCC
Q psy8771         116 EVMLDSPLNLSCVAVGSPMPFVKWRKGQNI---EL------TP------------DDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       116 ~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~---~~------~~------------~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      .+.+|++++|.|...+.-...+.|+|-...   .+      ..            ..|+..    ....|.|.++  +|+
T Consensus         2 ~v~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~rf~~~~~~~~~~L~I~~~~~sDs   81 (104)
T cd05720           2 DAELGQKVELKCEVLNSSPTGCSWLFQPPGSAPQPTFLVYLSGSSKITWDEEELSSKRFSGSRSSNSFVLTLKNFQKENE   81 (104)
T ss_pred             cccCCCeEEEEEEecCCCCCcEEEEEeCCCCCCCCEEEEEEeCCCCeeeccccCCCceEEEEecCCEEEEEECCCCHHHC
Confidence            357899999999987765567999984221   10      00            123332    2346999999  699


Q ss_pred             eEEEEEEEe
Q psy8771         169 ENYTCIAAS  177 (904)
Q Consensus       169 g~Y~c~a~n  177 (904)
                      |.|.|.+.+
T Consensus        82 gtY~Ca~~~   90 (104)
T cd05720          82 GYYFCSVAS   90 (104)
T ss_pred             EEEEEEEcc
Confidence            999998764

Ig_CD8_alpha: immunoglobulin (Ig)-like domain in CD8 alpha. The CD8 glycoprotein plays an essential role in the control of T-cell selection, maturation and the T-cell receptor (TCR)-mediated response to peptide antigen. CD8 is comprised of alpha and beta subunits and is expressed as either an alphaalpha or alphabeta dimer. Both dimeric isoforms can serve as a coreceptor for T cell activation and differentiation, however they have distinct physiological roles, different cellular distributions, unique binding partners etc. Each CD8 subunit is comprised of an extracellular domain containing a v-type Ig-like domain, a single pass transmembrane portion and a short intracellular domain. The Ig domain of CD8 alpha binds to antibodies.

>KOG4806|consensus

Probab=95.90  E-value=0.42  Score=47.43  Aligned_cols=128  Identities=16%  Similarity=0.213  Sum_probs=77.7

Q ss_pred             EEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEec---CCCCCCCCCCcEEEecC--CCEEEEEecCCCCCCCCccEEE
Q psy8771         677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK---QYVPGAPPQNVSCEPLS--STSIRISWEPPPVERSNGHIVY  751 (904)
Q Consensus       677 ~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~---~~~p~~~P~~l~~~~~~--~~~v~l~W~~~~~~~~~g~~~~  751 (904)
                      +.-..+.++..|..+++..|..- +..-.-+..+|.   ..-|. .|.+-.+..+.  -++.++.|...+.     .-..
T Consensus       286 ~~Qfvv~~~~~~~~rf~~~ndde-~~~~v~V~aSt~~t~~~~P~-LP~dTtVk~v~r~CSsAtIaW~gs~d-----~~~k  358 (454)
T KOG4806|consen  286 IRQFVVLPGERYLMRFEPSNDDE-ALQKVMVAASTEATFRDLPE-LPQDTTVKNVRRRCSSATIAWNGSPD-----EELK  358 (454)
T ss_pred             eeEEEecCCCceEEEEEecCCch-hhheeEeeeecccccCcCCC-CCCCceEeeeccccchheeeeccCcc-----hhee
Confidence            33456788899999999988742 221111222222   22344 46777776554  4789999997752     1457


Q ss_pred             EEEEEEEccCCCC--------------cc--E-----E------EEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCC
Q psy8771         752 YKLQFVETGRSDS--------------EA--S-----I------VTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPS  803 (904)
Q Consensus       752 Y~v~~~~~~~~~~--------------~~--~-----~------~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~  803 (904)
                      |.|+.........              ..  .     +      ...+ +..+-+|.||.||..|.+.|.|.-..|...+
T Consensus       359 yCIy~~~~~~~e~~v~~~~N~C~g~~~~~~s~~v~c~y~hs~~~q~~~~~i~teTI~gL~PgssYlldv~a~~~~g~~lp  438 (454)
T KOG4806|consen  359 YCIYVFNLPQRERSVVDFTNYCMGFVPKRVSQYVYCEYMHSRERQQSPDNIETETILGLMPGSSYLLDVTANLSMGKPLP  438 (454)
T ss_pred             EEEEEecccchhhhhhhhhccccCccccceeEEEeEEEecChhhhcchhhhhhhhhcccccCceEEEEEEEcccCCcccc
Confidence            8887776542100              00  0     0      0111 3445678999999999999999877776655


Q ss_pred             CCcEEeec
Q psy8771         804 SYPITIRT  811 (904)
Q Consensus       804 s~~~~~~t  811 (904)
                      -..+.++|
T Consensus       439 yqa~~v~t  446 (454)
T KOG4806|consen  439 YQALTVHT  446 (454)
T ss_pred             ceeEEEEe
Confidence            55555555

>cd05766 IgC_MHC_II_beta Class II major histocompatibility complex (MHC) beta chain immunoglobulin domain

Probab=95.90  E-value=0.047  Score=44.73  Aligned_cols=59  Identities=29%  Similarity=0.487  Sum_probs=39.3

Q ss_pred             cCCCeEEEEEEcc-CCCC-eEEEeeCCccccCCC----CceeecceEEEEeee-----cCCeEEEEEEEec
Q psy8771         119 LDSPLNLSCVAVG-SPMP-FVKWRKGQNIELTPD----DKLPVGRNVLTLDRV-----TESENYTCIAASV  178 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~p-~i~W~k~~~~~~~~~----~~~~~~~~~l~i~~l-----~d~g~Y~c~a~n~  178 (904)
                      .|+.++|.|.+.| .|.. .++|+++ |..+..+    .-...+++++.+...     +++..|+|.+...
T Consensus        13 ~~~~~~L~C~~~gFyP~~i~v~W~~~-g~~~~~~~~~~~~~~~~dgTy~~~s~L~~~~~~~~~ysC~V~H~   82 (94)
T cd05766          13 LSHPHLLVCHVWGFYPPEITVKWFKN-GQEETEGVVSTELIPNGDWTYQILVMLETTPSRGDTYTCVVEHS   82 (94)
T ss_pred             CCCCeEEEEEEeeecCCCCEEEEEEC-CeecCCCceecceEECCCCcEEEEEEEEEcCCCCCEEEEEEEeC
Confidence            6789999999999 5654 7899999 6555432    112234455555332     4677899988653

IgC_MHC_II_beta: Immunoglobulin (Ig) domain of major histocompatibility complex (MHC) class II beta chain. MHC class II molecules play a key role in the initiation of the antigen-specific immune reponse. In both humans and in mice these molecules have been shown to be expressed constitutively on the cell surface of professional antigen-presenting cells (APCs), for example on B-lymphocytes, monocytes, and macrophages. The expression of these molecules has been shown to be induced in nonprofessional APCs such as keratinocyctes, and they are expressed on the surface of activated human T cells and on T cells from other species. The MHC II molecules present antigenic peptides to CD4(+) T-lymphocytes. These peptides derive mostly from protelytic processing via the endocytic pathway, of antigens internalized by the APC. These peptides bind to the MHC class II molecules in the endosome be

>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R

Probab=95.88  E-value=0.027  Score=47.64  Aligned_cols=77  Identities=23%  Similarity=0.335  Sum_probs=54.2

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccE--EEEecCcceEEecCCC--CCceEEEEEE
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEAS--IVTLKNQTSFVLDELK--KWTEYRIWVL  793 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~--~~~~~~~~~~~i~~L~--p~t~Y~~~V~  793 (904)
                      .+|.++++... .-...|+|+++.   ....-..|.|+|+......+...  +..+ ..+.+.+....  ....|.+||+
T Consensus        23 p~P~nv~~~s~-nf~~iL~W~~~~---~~~~~~~ytVq~~~~~~~~W~~v~~C~~i-~~~~Cdlt~~~~~~~~~Y~~rV~   97 (107)
T PF01108_consen   23 PAPQNVTVDSV-NFKHILRWDPGP---GSPPNVTYTVQYKKYGSSSWKDVPGCQNI-TETSCDLTDETSDPSESYYARVR   97 (107)
T ss_dssp             SSCEEEEEEEE-TTEEEEEEEEST---TSSSTEEEEEEEEESSTSCEEEECCEEEE-SSSEEECTTCCTTTTSEEEEEEE
T ss_pred             CCCCeeEEEEE-CCceEEEeCCCC---CCCCCeEEEEEEEecCCcceeeccceecc-cccceeCcchhhcCcCCEEEEEE
Confidence            36899999875 556899999963   23456799999995554444332  2223 56777776644  6889999999


Q ss_pred             EeeCCC
Q psy8771         794 AGTSIG  799 (904)
Q Consensus       794 a~~~~g  799 (904)
                      |.....
T Consensus        98 A~~~~~  103 (107)
T PF01108_consen   98 AEVGNQ  103 (107)
T ss_dssp             EEETTE
T ss_pred             EEeCCc
Confidence            987543

...

>cd05770 IgC_beta2m Class I major histocompatibility complex (MHC) beta2-microglobulin

Probab=95.83  E-value=0.042  Score=44.67  Aligned_cols=57  Identities=18%  Similarity=0.279  Sum_probs=39.4

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCc----eeecceEEEEeee-----cCCeEEEEEEEe
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDK----LPVGRNVLTLDRV-----TESENYTCIAAS  177 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~l-----~d~g~Y~c~a~n  177 (904)
                      .|+..+|.|.|.| .|. ..|+|.|| |..+. +..    +...++++.+...     .++..|.|.+.-
T Consensus        14 ~g~~~~L~C~a~gFyP~~i~v~W~~d-g~~~~-~~~~~~~~p~~d~tyq~~s~l~~~~~~~~~ysC~V~H   81 (93)
T cd05770          14 NGKPNVLNCYVTGFHPPDIEIRLLKN-GVKIP-KVEQSDLSFSKDWTFYLLKSTEFTPTKGDEYACRVRH   81 (93)
T ss_pred             CCCceEEEEEEEEEeCCCCEEEEEEC-CEECC-CcEECcEEECCCCCEEEEEEEEECCCCCCeEEEEEEE
Confidence            5677899999999 564 57899999 76665 322    2235666665432     477889998865

IgC_beta2m: Immunoglobulin-like domain in beta2-Microglobulin (beta2m). Beta2m is the non-covalently bound light chain of the human class I major histocompatibility complex (MHC-I). Beta2m is structured as a beta-sandwich domain composed of two facing beta-sheets (four stranded and three stranded), that is typical of the C-type immunoglobulin superfamily. This structure is stabilized by an intramolecular disulfide bridge connecting two Cys residues in the facing beta -sheets. In vivo, MHC-I continuously exposes beta2m on the cell surface, where it may be released to plasmatic fluids, transported to the kidneys, degraded and then excreted.

>cd05719 Ig2_PVR_like Second immunoglobulin (Ig) domain of poliovirus receptor (PVR, also known as CD155) and similar proteins

Probab=95.71  E-value=0.072  Score=43.65  Aligned_cols=60  Identities=15%  Similarity=0.247  Sum_probs=36.1

Q ss_pred             CCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeecce------EEEEeee--cCCeEEEEEEEecCc
Q psy8771         120 DSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRN------VLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       120 g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~~------~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      .....+.|.+. |.|.+.|+|+++..... ........++      .|.+.-.  .++..|+|++.+..-
T Consensus        15 ~~~~va~C~s~~gkP~a~ItW~~~~~~~~-~~~~~~~~~g~~tv~S~l~~~p~~~d~G~~~tC~v~h~~l   83 (95)
T cd05719          15 EPVTVATCVSANGKPPATISWETTLGGEA-ETQSKENPNGTVTVTSEYRLVPSREANGKELTCVVSHPTL   83 (95)
T ss_pred             CccEEEEEECCCCcCCCEEEEEeCCCCcc-eeEeecCCCCCEEEEEEEEEecCHHHCCCEEEEEEeCccc
Confidence            35667899985 89999999999722211 1111111222      2333222  467889999988653

Ig2_PVR_like: domain similar to the second immunoglobulin (Ig) domain of poliovirus receptor (PVR, also known as CD155). Poliovirus (PV) binds to its cellular receptor (PVR/CD155) to initiate infection. CD155 is a membrane-anchored, single-span glycoprotein; its extracellular region has three Ig-like domains. There are four different isotypes of CD155 (referred to as alpha, beta, gamma, and delta), these result from alternate splicing of the CD155 mRNA, and have identical extracellular domains. CD155-beta and - gamma, are secreted, CD155-alpha and delta are membrane-bound and function as PV receptors. The virus recognition site is contained in the amino-terminal domain, D1. Having the virus attachment site on the receptor distal from the plasma membrane may be important for successful initiation of infection of cells by the virus. CD155 binds in the poliovirus

>cd05772 IgC_SIRP Signal-regulatory protein (SIRP) immunoglobulin-like domain

Probab=95.59  E-value=0.1  Score=44.24  Aligned_cols=64  Identities=25%  Similarity=0.383  Sum_probs=39.4

Q ss_pred             eEEecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCc-ee-ecc-eEEEEee-e------cCC-eEEEEEEEecC
Q psy8771         115 LEVMLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDK-LP-VGR-NVLTLDR-V------TES-ENYTCIAASVL  179 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~-~~-~~~-~~l~i~~-l------~d~-g~Y~c~a~n~~  179 (904)
                      .....|+.++|.|.+.| .|. ..|+|+|| |..+..... .. ..+ +++.+.. |      .|. ..|+|.+....
T Consensus        16 ~~~~~g~~~tL~C~a~gF~P~~i~v~W~kn-g~~~~~~~~~~~p~~d~~ty~~~S~L~~~~~~~d~~~~ytC~V~H~~   92 (111)
T cd05772          16 GRANPGQSVNFTCSAHGFSPRDITVKWLKN-GNELSAEQPNITPEGDSVSYNVTSTVQVKLTEDDVHSQVTCEVQHRT   92 (111)
T ss_pred             hccCCCCCEEEEEEEeeEeCCCCEEEEEEC-CEECcccccceeeCCCCCcEEEEEEEEEECccccccCceEEEEEeCC
Confidence            34457888999999998 564 68999999 666543211 11 122 2444422 1      232 35999987643

IgC_SIRP: Immunoglobulin-like domain of signal-regulatory proteins (SIRP); the signal-regulatory proteins (SIRP) are Ig-like cell surface receptors detected in hematopoietic and non-hematopoietic cells. While their extracellular domains are similar, SIRP are classified as alpha or beta based on the length of the intracytoplasmic domain. Those having a 110- to 113-amino acid tail are classified as SIRP-alpha, and those having a 5-amino acid tail as SIRP-beta. SIRP-alpha and SIRP-beta molecules are thought to have complementary roles in signal regulation: SIRP-alpha inhibit signalling via their immunoreceptor tyrosine (IT)-based inhibition motifs while SIRP-beta are activating. SIRP-beta lack the cytoplasmic domainof SIRP-alpha, and associate with at least one other transmembrane protein (DAP-12 or KARAP). The IT-based activation motifs within DAP-12's cytoplasmic domain may link SIRP-beta to the activating

>cd05762 Ig8_MLCK Eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK)

Probab=95.56  E-value=0.085  Score=43.75  Aligned_cols=39  Identities=10%  Similarity=0.003  Sum_probs=31.7

Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT  288 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~  288 (904)
                      ...+.+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus        53 ~~~s~L~I~~~~~~D~G~Ytc~a~N~~G~~~~~~~l~V~   91 (98)
T cd05762          53 ENSSKLTITEGQQEHCGCYTLEVENKLGSRQAQVNLTVV   91 (98)
T ss_pred             CCeeEEEECCCChhhCEEEEEEEEcCCCceeEEEEEEEe
Confidence            335789999999999999999999999987655444444

Ig8_MLCK: the eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK). MLCK is a key regulator of different forms of cell motility involving actin and myosin II. Agonist stimulation of smooth muscle cells increases cytosolic Ca2+, which binds calmodulin. This Ca2+-calmodulin complex in turn binds to and activates MLCK. Activated MLCK leads to the phosphorylation of the 20 kDa myosin regulatory light chain (RLC) of myosin II and the stimulation of actin-activated myosin MgATPase activity. MLCK is widely present in vertebrate tissues; it phosphorylates the 20 kDa RLC of both smooth and nonmuscle myosin II. Phosphorylation leads to the activation of the myosin motor domain and altered structural properties of myosin II. In smooth muscle MLCK it is involved in initiating contraction. In nonmuscle cells, MLCK may participate in cell division and cell motility; it has

>cd07692 Ig_CD3_epsilon Immunoglobulin (Ig)-like domain of CD3 epsilon chain

Probab=95.37  E-value=0.06  Score=39.47  Aligned_cols=51  Identities=18%  Similarity=0.363  Sum_probs=35.4

Q ss_pred             EecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee-cCCeEEEEEEEe
Q psy8771         117 VMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV-TESENYTCIAAS  177 (904)
Q Consensus       117 ~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l-~d~g~Y~c~a~n  177 (904)
                      ...|..|+|.|...+..   |.|.++ ...+..      .+..+.+.+. ++.|.|+|.+.+
T Consensus         4 sisGTtVtlTCP~~~~~---i~W~~n-~~~~~g------~~~~~~~~~~~e~~G~Y~C~~~~   55 (65)
T cd07692           4 SISGTTVTVTCPLSGDD---IKWKKN-DQVSQG------SDEKYLSLNHFSSSGYYHCTADN   55 (65)
T ss_pred             EEeccEEEEECCCCCCC---ceEEeC-CccCCC------CCceEEeeccCCCCceEEEEeCC
Confidence            35789999999866433   999999 544433      2234444444 789999999964

Ig_CD3_epsilon; immunoglobulin (Ig)-like domain of CD3 epsilon chain. CD3 is a T cell surface receptor that is associated with alpha/beta T cell receptors (TCRs). The CD3 complex consists of one gamma, one delta, two epsilon, and two zeta chains. The CD3 subunits form heterodimers as gamma/epsilon, delta/epsilon, and zeta/zeta. The gamma, delta, and epsilon chains each contain an extracellular Ig domain, whereas the extracellular domains of the zeta chains are very small and have unknown structure. The CD3 domain participates in intracellular signalling once the TCR has bound an MHC/antigen complex.

>cd04981 IgV_H Immunoglobulin (Ig) heavy chain (H), variable (V) domain

Probab=95.31  E-value=0.09  Score=45.34  Aligned_cols=63  Identities=21%  Similarity=0.290  Sum_probs=43.6

Q ss_pred             eEEecCCCeEEEEEEccCC--CCeEEEeeCC--ccc--c---C-----------CCCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ--NIE--L---T-----------PDDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~--~~~--~---~-----------~~~~~~~~------~~~l~i~~l--~  166 (904)
                      ..+.+|++++|.|...+.-  ...+.|+|-.  +.+  +   .           ...|+...      ...|.|.++  +
T Consensus         7 ~~v~~G~~vtL~C~~~~~~~~~~~~~WYkQ~~g~~p~~l~~~~~~~~~~~~~~~~~~rf~~~~~~~~~~~~L~I~~~~~~   86 (117)
T cd04981           7 GLVKPGQSLKLSCKASGFTFTSYGVNWVRQAPGKGLEWIGFINPGGGETYYADSVKGRFTITRDTSKSTVYLQLNSLTPE   86 (117)
T ss_pred             eEEcCCCCEEEEEEEeCCCcccceEEEEEECCCCCcEEEEEEecCCCceEeCcccCCcEEEEEEccCCEEEEEECCCCHH
Confidence            8899999999999987654  4568999831  211  1   0           01344331      126899999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |+|.|.|.+..
T Consensus        87 Dsa~YyCa~~~   97 (117)
T cd04981          87 DTAVYYCARGL   97 (117)
T ss_pred             HCEEEEEEEEc
Confidence            99999998764

IgV_H: Immunoglobulin (Ig) heavy chain (H), variable (V) domain. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. In Ig, each chain is composed of one variable domain (IgV) and one or more constant domains (IgC); these names reflect the fact that the variability in sequences is higher in the variable domain than in the constant domain. There are five types of heavy chains (alpha, gamma, delta, epsilon, and mu), which determine the type of immunoglobulin: IgA, IgG, IgD, IgE, and IgM, respectively. In higher vertebrates, there are two types of light chain, designated kappa and lambda, which can associate with any of the heavy chains. This family includes alpha, gamma, delta, epsilon, and mu heavy chains.

>smart00407 IGc1 Immunoglobulin C-Type

Probab=95.19  E-value=0.098  Score=40.81  Aligned_cols=56  Identities=23%  Similarity=0.394  Sum_probs=34.6

Q ss_pred             CeEEEEEEccC-CC-CeEEEeeCCccccCCCCc----eeecceEEEEee------e--cCCeEEEEEEEec
Q psy8771         122 PLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDK----LPVGRNVLTLDR------V--TESENYTCIAASV  178 (904)
Q Consensus       122 ~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~------l--~d~g~Y~c~a~n~  178 (904)
                      .++|.|.+.|. |. ..|+|+|+ |..+..+..    ....++.+.+..      .  .++..|+|.+...
T Consensus         1 ~~~L~C~a~gf~P~~i~v~W~k~-g~~~~~~~~~~~~~~~~~gt~~~~s~L~v~~~~~~~~~~~tC~V~H~   70 (75)
T smart00407        1 KATLVCLVSGFYPPDITVTWLRN-GQEVTSGVSTTDPLKNSDGTYFLSSYLTVSASTWESGDTYTCQVTHE   70 (75)
T ss_pred             CeEEEEEEEeEeCCCCEEEEEEC-CEECCCCEEECceEECCCCCEEEEEEEEEccccCCCCCEEEEEEEEc
Confidence            46899999995 55 68999999 654333211    111344333322      1  4678899988653

>cd07703 Ig2_Nectin-2_like Second immunoglobulin (Ig) domain of nectin-2 (also known as poliovirus receptor related protein 2 or CD112) and similar proteins

Probab=95.12  E-value=0.12  Score=42.29  Aligned_cols=61  Identities=15%  Similarity=0.169  Sum_probs=36.4

Q ss_pred             CCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeecceE------EEEeee--cCCeEEEEEEEecCcc
Q psy8771         120 DSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRNV------LTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       120 g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~~~------l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      .....+.|.+. |.|.+.|+|+++... ..........++.      |.+.-.  .++..|+|++.+..-.
T Consensus        15 ~~~~va~C~s~~gkPaa~IsW~~~~~g-~~~~~~~~~~~gt~tv~S~l~~~P~~~d~Gk~ltC~v~h~al~   84 (95)
T cd07703          15 IPVPVAKCVSANGRPPARISWSSTLGG-NANTTSKENGDGTVTVTSEYSLVPTPEANGKEVTCKVEHETLQ   84 (95)
T ss_pred             CccEEEEEEcCCCCCCcEEEEEcCCCC-CeeEEEEeCCCCCEEEEEEEEEecCHHHCCCEEEEEEeCcccC
Confidence            35678999777 789999999998222 1111111112232      333222  4678899999986543

Ig2_Nectin-2_like: domain similar to the second immunoglobulin (Ig) domain of nectin-2 (also known as poliovirus receptor related protein 2 or CD112). Nectin-2 belongs to the nectin family comprised of four transmembrane glycoproteins (nectins-1 through 4). Nectins are synaptic cell adhesion molecules (CAMs) which facilitate adhesion and signaling at various intracellular junctions. Nectins form homophilic cis-dimers, followed by homophilic and heterophilic trans-dimers involved in cell-cell adhesion. Nectin-2 and nectin-3 localize at Sertoli-spermatid junctions where they form heterophilic trans-interactions between the cells that are essential for the formation and maintenance of the junctions and for spermatid development.

>cd05847 IgC_CH2_IgE CH2 domain (second constant Ig domain of the heavy chain) in immunoglobulin E (IgE)

Probab=94.82  E-value=0.19  Score=41.13  Aligned_cols=60  Identities=17%  Similarity=0.228  Sum_probs=38.7

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCC----ceeecceEEEEeee--------cCCeEEEEEEEecC
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDD----KLPVGRNVLTLDRV--------TESENYTCIAASVL  179 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~----~~~~~~~~l~i~~l--------~d~g~Y~c~a~n~~  179 (904)
                      .++.++|.|.+.| .|. ..|+|.++ |..+..+.    -...+++++.+...        .++..|+|.+....
T Consensus        13 ~~~~~~L~C~a~gFyP~~I~vtW~~d-g~~~~~~~~~s~~~~~~~~Ty~~~S~L~v~~~~w~~~~~ytC~V~H~~   86 (94)
T cd05847          13 TSETIQLLCLISGYTPGTIEVEWLVD-GQVATLVAASTAPQKEEGSTFSTTSELNVTQEDWKSGKTYTCKVTHQG   86 (94)
T ss_pred             CCCCEEEEEEEEeEECCCCEEEEEEC-CEECcCceeecccEECCCCcEEEEEEEEEchHHhcCCCeEEEEEEECC
Confidence            4567999999999 565 67899999 65553321    11223445554332        25688999997644

IgC_CH2_IgE: The second constant domain of the heavy chain of immunoglobulin E (IgE). The basic structure of immunoglobulin (Ig) molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. There are two types of light chains: kappa and lambda; each composed of a constant domain and a variable domain. There are five types of heavy chains: alpha, delta, epsilon, gamma, and mu, all consisting of a variable domain (VH) and three (in alpha, delta, and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). The different classes of antibodies vary in their heavy chains; the IgE class has the epsilon type. This domain (Cepsilon2) of IgE is in place of the flexible hinge region found in IgG.

>cd07696 IgC_CH3 CH3 domain (third constant Ig domain of the heavy chain) in immunoglobulin

Probab=94.81  E-value=0.12  Score=42.52  Aligned_cols=63  Identities=14%  Similarity=0.408  Sum_probs=39.6

Q ss_pred             EEecCCCeEEEEEEccC--CC-CeEEEeeCCccccCC--CCceeecceEEEEeee--------cCCeEEEEEEEec
Q psy8771         116 EVMLDSPLNLSCVAVGS--PM-PFVKWRKGQNIELTP--DDKLPVGRNVLTLDRV--------TESENYTCIAASV  178 (904)
Q Consensus       116 ~~~~g~~~~l~C~~~g~--p~-p~i~W~k~~~~~~~~--~~~~~~~~~~l~i~~l--------~d~g~Y~c~a~n~  178 (904)
                      .+..|+.++|.|.+.|.  |. ..|+|.|+++.....  .......++++.+...        .++-.|+|.+...
T Consensus        10 ~l~~~~~~tLtC~v~gf~yP~~i~v~W~r~~~~~~~~~~~~~~~~~dgty~~~s~l~v~~~~w~~g~~ysC~V~H~   85 (96)
T cd07696          10 QLLLTKSVKLTCLVTNLTSPEGVNVTWTRGSGEPVKASIQPPESHNNATLSVTSTLNVSTDDWISGDTFQCKVTHP   85 (96)
T ss_pred             HhccCCCeEEEEEEeCCCCCCCcEEEEEECCeEeeeEEecccccCCCCCEEEEEEEEeCHHHccCCCcEEEEEECC
Confidence            34568999999999998  54 478999984433221  1112234555555433        1456799988653

IgC_CH3: The third immunoglobulin constant domain (IgC) of immunoglobulin (Ig) heavy chains. This domain is found on the Fc fragment. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. There are two types of light chains: kappa and lambda; each composed of a constant domain and a variable domain. There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are modular proteins, in which the variable and constant domains have clear, conserved sequence patterns.

>cd05851 Ig3_Contactin-1 Third Ig domain of contactin-1

Probab=94.63  E-value=0.14  Score=41.46  Aligned_cols=28  Identities=21%  Similarity=0.210  Sum_probs=25.4

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++++.+.+.|+|.|.|..|...
T Consensus        53 ~~L~I~~v~~~D~G~Y~C~A~N~~G~~~   80 (88)
T cd05851          53 AVLKIFNIQPEDEGTYECEAENIKGKDK   80 (88)
T ss_pred             CEEEECcCChhhCEEEEEEEEcCCCceE
Confidence            5799999999999999999999999754

Ig3_Contactin-1: Third Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>cd07704 Ig2_Nectin-3-4_like Second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3), nectin-4 (poliovirus receptor related protein 4) and similar proteins

Probab=94.58  E-value=0.35  Score=39.41  Aligned_cols=63  Identities=16%  Similarity=0.202  Sum_probs=40.0

Q ss_pred             eEEecCCCeEE-EEEEc-cCCCCeEEEeeCCccccCCCCceeecce------EEEEeee--cCCeEEEEEEEec
Q psy8771         115 LEVMLDSPLNL-SCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRN------VLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       115 ~~~~~g~~~~l-~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~~------~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      +.+.+|+.+.+ .|.+. |.|.+.|+|+.+..+.. ........++      .|.+.-.  .++-.++|.+...
T Consensus        11 ~~~~~g~~~~vA~C~sa~gkPaa~IsW~~~~~G~~-~~~~~~~~ngT~TV~S~~~l~p~r~d~G~~vtC~V~H~   83 (97)
T cd07704          11 LLIDGGNGTTLAACCAAEGRPAADVTWETNVYGTS-ESHSQEHPNGTTTVTSEYIWVPSRHANGHPLTCVVSHP   83 (97)
T ss_pred             eEeecCcceeEEEEEccCCccCCEeEEeCCCCCcc-ceeeecCCCCCEEEEEEEEEEeCHHHCCcEEEEEEeCc
Confidence            77889999999 88766 78999999998733321 1111111222      2333222  4778899998764

Ig2_Nectin-3-4_like: domain similar to the second immunoglobulin (Ig) domain of nectin-3 (also known as poliovirus receptor related protein 3) and nectin-4 (poliovirus receptor related protein 4). Nectin-3 and nectin-4 belong to the nectin family comprised of four transmembrane glycoproteins (nectins-1 through 4). Nectins are synaptic cell adhesion molecules (CAMs) which facilitate adhesion and signaling at various intracellular junctions. Nectins form homophilic cis-dimers, followed by homophilic and heterophilic trans-dimers involved in cell-cell adhesion. Nectin-2 and nectin-3 localize at Sertoli-spermatid junctions where they form heterophilic trans-interactions between the cells that are essential for the formation and maintenance of the junctions and for spermatid development. Nect

>cd05748 Ig_Titin_like Immunoglobulin (Ig)-like domain of titin and similar proteins

Probab=94.47  E-value=0.11  Score=40.53  Aligned_cols=63  Identities=10%  Similarity=0.127  Sum_probs=40.5

Q ss_pred             eEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         207 VKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       207 l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      |.+...+.....+.|...+..+.          ...............+.|.++.+.+.+.|+|.|.|..|..
T Consensus         4 l~c~~~G~P~p~v~W~k~g~~l~----------~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~   66 (74)
T cd05748           4 LEVPISGRPTPTVTWSKDGKPLK----------LSGRVQIETTASSTSLVIKNAERSDSGKYTLTLKNPAGEK   66 (74)
T ss_pred             EEeeEeeeCCCeEEEEECCEEcC----------CCCeEEEEECCCeEEEEECCCCcCcCEEEEEEEECCCccE
Confidence            34444455566788876543321          0111222222335779999999999999999999999864

Ig_Titin_like: immunoglobulin (Ig)-like domain found in titin-like proteins. Titin (also called connectin) is a fibrous sarcomeric protein specifically found in vertebrate striated muscle. Titin is gigantic, depending on isoform composition it ranges from 2970 to 3700 kDa, and is of a length that spans half a sarcomere. Titin largely consists of multiple repeats of Ig-like and fibronectin type 3 (FN-III)-like domains. Titin connects the ends of myosin thick filaments to Z disks and extends along the thick filament to the H zone. It appears to function similarly to an elastic band, keeping the myosin filaments centered in the sarcomere during muscle contraction or stretching. Within the sarcomere, titin is also attached to or is associated with myosin binding protein C (MyBP-C). MyBP-C appears to contribute to the generation of passive tension by titin, and similar to titin has repeated Ig-like and FN-

>cd05894 Ig_C5_MyBP-C C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)

Probab=94.36  E-value=0.12  Score=41.68  Aligned_cols=67  Identities=10%  Similarity=0.114  Sum_probs=43.5

Q ss_pred             CcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         204 PLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       204 p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...|.+...+.....+.|...+.++..         ....+..........|.|.++.+.+.+.|+|.|.|..|..
T Consensus        12 ~v~l~c~~~G~P~P~v~W~k~~~~i~~---------~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a~N~~G~~   78 (86)
T cd05894          12 KLRLDVPISGEPAPTVTWSRGDKAFTE---------TEGRVRVESYKDLSSFVIEGAEREDEGVYTITVTNPVGED   78 (86)
T ss_pred             EEEEEeeEeecCCCeEEEEECCEECcc---------CCCeEEEEEcCCeEEEEECCCccCcCEEEEEEEEeCCCcE
Confidence            345555556666678888766443321         0111222222234679999999999999999999999964

Ig_C5_MyBP_C : the C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C). MyBP_C consists of repeated domains, Ig and fibronectin type 3, and various linkers. Three isoforms of MYBP_C exist and are included in this group: cardiac(c), and fast and slow skeletal muscle (s) MyBP_C. cMYBP_C has insertions between and inside domains and an additional cardiac-specific Ig domain at the N-terminus. For cMYBP_C an interaction has been demonstrated between this C5 domain and the Ig C8 domain.

>cd05769 IgC_TCR_beta T cell receptor (TCR) beta chain constant immunoglobulin domain

Probab=94.34  E-value=0.22  Score=42.39  Aligned_cols=66  Identities=20%  Similarity=0.357  Sum_probs=40.9

Q ss_pred             eEEecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCc---eee--cceEEEEeee------c--C-CeEEEEEEEec
Q psy8771         115 LEVMLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDK---LPV--GRNVLTLDRV------T--E-SENYTCIAASV  178 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~---~~~--~~~~l~i~~l------~--d-~g~Y~c~a~n~  178 (904)
                      .....++.++|.|.+.| .|. ..|+|+|| +..+..+..   ...  +++++.+...      +  + +..|+|.+.-.
T Consensus        13 ~e~~~~~~~tL~Cla~gFyP~~I~V~W~kn-g~~l~~g~~~~~~~~~~~~gTYs~~S~L~v~~~~w~~~~~~ytC~V~H~   91 (115)
T cd05769          13 AEIRNKRKATLVCLATGFYPDHVSLSWKVN-GKEVTDGVATDPQALRENTSTYSISSRLRVSATEWFNPRNTFTCIVQFY   91 (115)
T ss_pred             HHhccCCCcEEEEEEEeEeCCCcEEEEEEC-CEECCCCcccccceecCCCCeEEEEEEEEEChHHhccCCCeEEEEEEEe
Confidence            33445678999999999 565 48899999 655543321   111  2245554332      1  2 57899988765


Q ss_pred             Ccc
Q psy8771         179 LGV  181 (904)
Q Consensus       179 ~g~  181 (904)
                      ...
T Consensus        92 g~~   94 (115)
T cd05769          92 GGT   94 (115)
T ss_pred             CCc
Confidence            443

IgC_TCR_beta: Constant domain of the beta chain of alpha/beta T-cell antigen receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are composed of alpha and beta, or gamma and delta, polypeptide chains with variable (V) and constant (C) regions. This group includes the variable domain of the beta chain. Alpha/beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. The antigen binding site is formed by the variable domains of the alpha and beta chains, located at the N-terminus of each chain. Alpha/beta TCRs recognize antigens differently from gamma/delta TCRs.

>cd05768 IgC_CH4 CH4 domain (fourth constant Ig domain of the heavy chain) in immunoglobulin

Probab=94.20  E-value=0.13  Score=42.85  Aligned_cols=60  Identities=25%  Similarity=0.478  Sum_probs=37.8

Q ss_pred             EecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCc----eee---cceEEEEeee--------cCCeEEEEEEEe
Q psy8771         117 VMLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDK----LPV---GRNVLTLDRV--------TESENYTCIAAS  177 (904)
Q Consensus       117 ~~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~----~~~---~~~~l~i~~l--------~d~g~Y~c~a~n  177 (904)
                      +..|+.++|.|.+.| .|. ..|+|.|+ |..+.....    ...   +++++.+...        .++..|+|.+.-
T Consensus        13 ~~~~~~~tL~C~a~gFyP~~i~v~W~k~-g~~~~~~~~~~~~~~~~~~~dgTy~~~s~L~v~~~~w~~~~~ytC~V~H   89 (102)
T cd05768          13 LSLQETATLTCLVKGFSPSDIFVKWLQN-GQPLSKQKYVTTAPMQEPGGNESYFLYSKLTVSAEDWNAGDVFTCVVGH   89 (102)
T ss_pred             hCcCCceEEEEEEeeEeCCCCEEEEEEC-CEECCcccccccCcccccCCCCeEEEEEEEEEcHHHhcCCCcEEEEeEe
Confidence            345788999999999 454 36799999 655543211    111   1455555432        246789998864

IgC_CH4: The fourth immunoglobulin constant domain (IgC), of immunoglobulin (Ig) heavy chains. This domain is found on the Fc fragment. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. There are two types of light chains: kappa and lambda; each composed of a constant domain and a variable domain. There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are modular proteins, in which the variable and constant domains have clear, conserved sequence patterns.

>cd07691 Ig_CD3_gamma_delta Immunoglobulin (Ig)-like domain of CD3 gamma and delta chains

Probab=94.19  E-value=0.13  Score=37.95  Aligned_cols=47  Identities=21%  Similarity=0.480  Sum_probs=33.5

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      ...+.|.|.+.    -.|+|+|+ ......      ....|.|..+  .+.|.|+|.+.+
T Consensus         6 ~~~V~L~C~~~----tsi~W~kG-~~~~~~------~~~tlnLGs~~~DPRG~Y~C~~s~   54 (69)
T cd07691           6 EGKVFLKCNGA----TNITWKKG-KEILEV------SNTLLDLGSRINDPRGTYSCKESE   54 (69)
T ss_pred             CceEEEEecCC----CcEEEecC-cccccc------cccEEeccCcccCCCcceEecCcc
Confidence            45789999662    44999995 433321      2567777776  689999998876

Ig_CD3_gamma_delta; immunoglobulin (Ig)-like domain of CD3 gamma and delta chains. CD3 is a T cell surface receptor that is associated with alpha/beta T cell receptors (TCRs). The CD3 complex consists of one gamma, one delta, two epsilon, and two zeta chains. The CD3 subunits form heterodimers as gamma/epsilon, delta/epsilon, and zeta/zeta. The gamma, delta, and epsilon chains each contain an extracellular Ig domain, whereas the extracellular domains of the zeta chains are very small and have unknown structure. The CD3 domain participates in intracellular signalling once the TCR has bound an MHC/antigen complex.

>PF07654 C1-set: Immunoglobulin C1-set domain; InterPro: IPR003597 The basic structure of immunoglobulin (Ig) molecules is a tetramer of two light chains and two heavy chains linked by disulphide bonds

Probab=94.14  E-value=0.2  Score=39.99  Aligned_cols=60  Identities=22%  Similarity=0.460  Sum_probs=40.2

Q ss_pred             cCCCeEEEEEEcc-CCCC-eEEEeeCCccccCCCCce---e-ecceEEEEeee-----cCCeEEEEEEEecC
Q psy8771         119 LDSPLNLSCVAVG-SPMP-FVKWRKGQNIELTPDDKL---P-VGRNVLTLDRV-----TESENYTCIAASVL  179 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~p-~i~W~k~~~~~~~~~~~~---~-~~~~~l~i~~l-----~d~g~Y~c~a~n~~  179 (904)
                      .++.++|.|.+.| .|.. .|+|.++ +..+......   . ..++.+.+...     .++..|+|.+....
T Consensus         7 ~~~~~~L~C~v~~f~P~~i~v~W~~~-~~~~~~~~~~~~~~~~~dgty~~~s~l~v~~~~~~~ysC~V~H~~   77 (83)
T PF07654_consen    7 LGGSVTLTCLVSGFYPKDITVTWLKN-GKEVTEGVETTPPPPNSDGTYSVTSSLTVTWNSGDEYSCRVTHES   77 (83)
T ss_dssp             STSEEEEEEEEEEEBSSTEEEEEEET-TEEETTTEEEEEEEEETTSEEEEEEEEEEETTTTGGEEEEEEETT
T ss_pred             CCCCEEEEEEEEEEECCCcEEEEEec-cceeeeeeeecccccccccceeeeEEEEecCCCCCEEEEEEEECC
Confidence            4889999999999 5654 7899999 6655543221   1 24555444332     47778999987643

There are two types of light chains: kappa and lambda, each composed of a constant domain (CL) and a variable domain (VL). There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are highly modular proteins, in which the variable and constant domains have clear, conserved sequence patterns. The domains in Ig and Ig-like molecules are grouped into four types: V-set (variable; IPR013106 from INTERPRO), C1-set (constant-1; IPR003597 from INTERPRO), C2-set (constant-2; IPR008424 from INTERPRO) and I-set (intermediate; IPR013098 from INTERPRO) []. Structural studies have shown that these domains share a common core Greek-key beta-sandwich structure, with the types differing in the number of strands in the beta-sheets as well as in their sequence patterns [, ]. Immunoglobulin-like domains that are related in both sequence and structure can be found in several diverse protein families. Ig-like domains are involved in a variety of functions, including cell-cell recognition, cell-surface receptors, muscle structure and the immune system []. This entry represents C1-set domains, which are classical Ig-like domains resembling the antibody constant domain. C1-set domains are found almost exclusively in molecules involved in the immune system, such as in immunoglobulin light and heavy chains, in the major histocompatibility complex (MHC) class I and II complex molecules [, ], and in various T-cell receptors.; PDB: 3BVN_D 3BXN_A 3PWV_E 3L9R_F 2XFX_B 1BMG_A 1K8I_A 3M1B_G 3M17_C 1EXU_A ....

>cd04986 IgC_CH2 CH2 domain (second constant Ig domain of the heavy chain) in immunoglobulin

Probab=94.11  E-value=0.21  Score=40.97  Aligned_cols=63  Identities=17%  Similarity=0.361  Sum_probs=38.8

Q ss_pred             EecCCCeEEEEEEcc-C-CC-CeEEEeeCCccccCCCCceeecceEEEEeee--------cCCeEEEEEEEecC
Q psy8771         117 VMLDSPLNLSCVAVG-S-PM-PFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--------TESENYTCIAASVL  179 (904)
Q Consensus       117 ~~~g~~~~l~C~~~g-~-p~-p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--------~d~g~Y~c~a~n~~  179 (904)
                      ...++.++|.|.+.| . |. ..|+|.++++..-.........++++.+...        ..+..|+|.+....
T Consensus        16 l~~~~~atLtClV~~f~~P~~i~V~W~~~g~~~~~~t~~~~~~dgTys~~S~L~v~~~~W~~g~~ytC~V~H~~   89 (99)
T cd04986          16 LLLGSSASLTCTLSGLRDPEGAVFTWTPSGGKEAVQTSAESDQCGCYSVSSVLPGCAEEWNKGEPFACTVTHPE   89 (99)
T ss_pred             hCcCCccEEEEEEeccCCCCCeEEEEEECCccCcEEcCcccCCCCCEEEEEEEEeCHHHhcCCCeEEEEEECCC
Confidence            336789999999999 4 54 4789999944311111112224556666544        24566999987543

IgC_CH2: The second immunoglobulin constant domain (IgC), of immunoglobulin (Ig) heavy chains. This domain is found on the Fc fragment. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. There are two types of light chains: kappa and lambda; each composed of a constant domain and a variable domain. There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are modular proteins, in which the variable and constant domains have clear, conserved sequence patterns.

>cd05747 Ig5_Titin_like M5, fifth immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins

Probab=93.99  E-value=0.47  Score=38.80  Aligned_cols=29  Identities=10%  Similarity=0.274  Sum_probs=25.9

Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ....+.|.+++..+.+.|+|.|.|..|..
T Consensus        57 ~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~   85 (92)
T cd05747          57 YKSTFEISKVQMSDEGNYTVVVENSEGKQ   85 (92)
T ss_pred             CeeEEEECCCCcccCEeEEEEEEcCCCCE
Confidence            34689999999999999999999999864

Ig5_Titin_like: domain similar to the M5, fifth immunoglobulin (Ig)-like domain from the human titin C terminus. Titin (also called connectin) is a fibrous sarcomeric protein specifically found in vertebrate striated muscle. Titin is gigantic; depending on isoform composition it ranges from 2970 to 3700 kDa, and is of a length that spans half a sarcomere. Titin largely consists of multiple repeats of Ig-like and fibronectin type 3 (FN-III)-like domains. Titin connects the ends of myosin thick filaments to Z disks and extends along the thick filament to the H zone, and appears to function similar to an elastic band, keeping the myosin filaments centered in the sarcomere during muscle contraction or stretching.

>cd04972 Ig_TrkABC_d4 Fourth domain (immunoglobulin-like) of Trk receptors TrkA, TrkB and TrkC

Probab=93.95  E-value=0.3  Score=39.73  Aligned_cols=29  Identities=17%  Similarity=0.176  Sum_probs=25.8

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.++++.+.+.|+|.|.|..|...
T Consensus        55 ~~~L~I~~v~~~D~g~Y~C~A~N~~G~~~   83 (90)
T cd04972          55 IYNLQLSNITSETQTTVTCTAENPVGQAN   83 (90)
T ss_pred             EEEEEEecCCcccCEEEEEEEECCCCcee
Confidence            46799999999999999999999998743

TrkABC_d4: the fourth domain of Trk receptors TrkA, TrkB and TrkC, this is an immunoglobulin (Ig)-like domain which binds to neurotrophin. The Trk family of receptors are tyrosine kinase receptors. They are activated by dimerization, leading to autophosphorylation of intracellular tyrosine residues, and triggering the signal transduction pathway. TrkA, TrkB, and TrkC share significant sequence homology and domain organization. The first three domains are leucine-rich domains. The fourth and fifth domains are Ig-like domains playing a part in ligand binding. TrkA, Band C mediate the trophic effects of the neurotrophin Nerve growth factor (NGF) family. TrkA is recognized by NGF. TrKB is recognized by brain-derived neurotrophic factor (BDNF) and neurotrophin (NT)-4. TrkC is recognized by NT-3. NT-3 is promiscuous as in some cell systems it activates TrkA and TrkB receptors. TrkA is a receptor fo

>cd05893 Ig_Palladin_C C-terminal immunoglobulin (Ig)-like domain of palladin

Probab=93.93  E-value=0.1  Score=40.64  Aligned_cols=28  Identities=11%  Similarity=0.018  Sum_probs=25.2

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++++.+.+.|+|.|.|..|...
T Consensus        41 ~~L~I~~v~~~D~G~Y~C~A~N~~G~~~   68 (75)
T cd05893          41 ICLLIQGATKEDAGWYTVSAKNEAGIVS   68 (75)
T ss_pred             EEEEECCCCHHHCEEEEEEEEcCCCEEE
Confidence            3689999999999999999999998754

Ig_Palladin_C: C-terminal immunoglobulin (Ig)-like domain of palladin. Palladin belongs to the palladin-myotilin-myopalladin family. Proteins belonging to this family contain multiple Ig-like domains and function as scaffolds, modulating actin cytoskeleton. Palladin binds to alpha-actinin ezrin, vasodilator-stimulated phosphoprotein VASP, SPIN90 (DIP, mDia interacting protein), and Src. Palladin also binds F-actin directly, via its Ig3 domain. Palladin is expressed as several alternatively spliced isoforms, having various combinations of Ig-like domains, in a cell-type-specific manner. It has been suggested that palladin's different Ig-like domains may be specialized for distinct functions.

>smart00406 IGv Immunoglobulin V-Type

Probab=93.91  E-value=0.17  Score=40.13  Aligned_cols=53  Identities=23%  Similarity=0.532  Sum_probs=34.7

Q ss_pred             CeEEEEEEccCCCC--eEEEeeCCc-cc---c-------------CCCCceee------cceEEEEeee--cCCeEEEEE
Q psy8771         122 PLNLSCVAVGSPMP--FVKWRKGQN-IE---L-------------TPDDKLPV------GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       122 ~~~l~C~~~g~p~p--~i~W~k~~~-~~---~-------------~~~~~~~~------~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      .++|.|.+.+...+  .+.|++... ..   +             ....|+..      +..+|.|.++  +|+|.|.|.
T Consensus         1 ~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~   80 (81)
T smart00406        1 SVTLSCKASGFTFSSYYVSWVRQPPGKGLEWLGYIGSSGSTYYQQSYKGRVTISKDTSKNDVSLTISNLRVEDTGTYYCA   80 (81)
T ss_pred             CEEEEEEEeccccceeEEEEEEeCCCCCeEEEEEEcCCCcEEECcccCCcEEEEecCcCCEEEEEEcCCCHHHCEEEEEc
Confidence            47899998876654  789998421 10   1             01234432      2347999999  699999996

>COG4733 Phage-related protein, tail component [Function unknown]

Probab=93.90  E-value=0.25  Score=55.24  Aligned_cols=144  Identities=9%  Similarity=0.034  Sum_probs=78.8

Q ss_pred             EEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCC-CeeEE-ecCCCCCCCCCCcEEEecCCC
Q psy8771         654 YELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTP-PIPVR-TKQYVPGAPPQNVSCEPLSST  731 (904)
Q Consensus       654 y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~-~~~~~-t~~~~p~~~P~~l~~~~~~~~  731 (904)
                      +.+.|......++..........+.+.||-+ ..|.++|+|+|..|....-. ...+. .....|+..+..+.+..+ .-
T Consensus       639 ~~~a~~a~~~~~~vta~rt~~~~~~~~gi~~-GqY~i~VrAiN~~g~~~~~a~s~~f~i~g~~~Ppp~~~t~~a~~i-t~  716 (952)
T COG4733         639 AAWAYEAGWDGNWITAPRTSAAGFDVEGIPA-GQYAIRVRAINVFEPNSPDATAYEFALNGKKVPPPKAMIYDAVII-TL  716 (952)
T ss_pred             HHHHhhcccCCceEecccccccceeecCcCc-cceEEEEEEeeccCCCCCCcceeEEEecCCCCCCCcccccceEEE-Ee
Confidence            3444444443433333445567899999988 68999999999988653322 33332 222223322333333332 34


Q ss_pred             EEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec--CcceEEecCCCCCceEEEEEEEeeCCCCCCCC
Q psy8771         732 SIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSS  804 (904)
Q Consensus       732 ~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s  804 (904)
                      .+.|.|-.|..   .-.+..=.+++.......  .+...+.  ......-.+|++|..|.|++++.|..|...+-
T Consensus       717 ~~~l~v~dPt~---~~d~~~sei~~s~~~d~~--~~Ar~LG~~~~~~~~~~~i~~g~~~~F~~R~Vn~vG~~~~~  786 (952)
T COG4733         717 VIRLVVGDPTG---AVDITSTEIRSAVIADGN--FQARSLGNLNYPGLFSVGIQAGLTFWFRNRNVDLVGNNDKW  786 (952)
T ss_pred             eeeEEEecCCc---ceEEeeeeeeeeccccch--hHHhhhhccccccccccCcCCCceEEEEeeecccccccccc
Confidence            67788887732   111222223332222111  1111222  22222337999999999999999998876443

>cd05854 Ig6_Contactin-2 Sixth Ig domain of contactin-2

Probab=93.83  E-value=0.23  Score=39.82  Aligned_cols=36  Identities=11%  Similarity=0.031  Sum_probs=29.4

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEE
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVI  287 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~  287 (904)
                      ...++|.++++.+.+.|+|.|.|..|....+..+.+
T Consensus        46 ~~~L~I~~v~~~D~G~YtC~A~n~~g~~~~~~~L~V   81 (85)
T cd05854          46 IGDLVIVNAQLSHAGTYTCTAQTVVDSASASATLVV   81 (85)
T ss_pred             EeEEEEccCChhhCeEEEEEEecCCCCEEEEEEEEE
Confidence            468999999999999999999999987654444443

Ig6_Contactin-2: Sixth Ig domain of the neural cell adhesion molecule contactin-2-like. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. It may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module by contacts between IG domains 1 and 4, and domains 2 and 3. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-2 is also expressed in retinal amacrine cells in the developing c

>cd04968 Ig3_Contactin_like Third Ig domain of contactin

Probab=93.78  E-value=0.27  Score=39.78  Aligned_cols=30  Identities=17%  Similarity=0.071  Sum_probs=26.4

Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ....+.|.+++..+.+.|+|.|.|..|...
T Consensus        51 ~~~~L~i~~v~~~D~G~Y~C~a~N~~G~~~   80 (88)
T cd04968          51 SGAVLKIPNIQFEDEGTYECEAENIKGKDT   80 (88)
T ss_pred             eCCEEEECCCCcccCEEEEEEEEECCCcEE
Confidence            346799999999999999999999999753

Ig3_Contactin_like: Third Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd05743 Ig_Perlecan_D2_like Immunoglobulin (Ig)-like domain II (D2) of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2

Probab=93.77  E-value=0.38  Score=37.81  Aligned_cols=30  Identities=17%  Similarity=0.091  Sum_probs=26.4

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPP  281 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~  281 (904)
                      ...+.|.++++.+.+.|+|.|.|..|....
T Consensus        41 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~   70 (78)
T cd05743          41 YGTLTIRDVKESDQGAYTCEAINTRGMVFG   70 (78)
T ss_pred             EEEEEECCCChHHCEEEEEEEEecCCEEEe
Confidence            467999999999999999999999997543

Ig_Perlecan_D2_like: the immunoglobulin (Ig)-like domain II (D2) of the human basement membrane heparan sulfate proteoglycan perlecan, also known as HSPG2. Perlecan consists of five domains. Domain I has three putative heparan sulfate attachment sites; domain II has four LDL receptor-like repeats, and one Ig-like repeat; domain III resembles the short arm of laminin chains; domain IV has multiple Ig-like repeats (21 repeats in human perlecan); and domain V resembles the globular G domain of the laminin A chain and internal repeats of EGF. Perlecan may participate in a variety of biological functions including cell binding, LDL-metabolism, basement membrane assembly and selective permeability, calcium binding, and growth- and neurite-promoting activities.

>cd05892 Ig_Myotilin_C C-terminal immunoglobulin (Ig)-like domain of myotilin

Probab=93.71  E-value=0.17  Score=39.41  Aligned_cols=65  Identities=14%  Similarity=0.154  Sum_probs=40.1

Q ss_pred             eEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeec-ceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         207 VKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISG-IITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       207 l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      |.+...+...-++.|...+..+..         ....+..... .....|.|.++++.+.+.|+|.|.|..|...
T Consensus         3 l~C~v~G~P~P~i~W~k~~~~i~~---------~~~r~~~~~~~~g~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~   68 (75)
T cd05892           3 LECQISAIPPPKIFWKRNNEMVQY---------NTDRISLYQDNSGRVTLLIKNVNKKDAGWYTVSAVNEAGVAT   68 (75)
T ss_pred             EEEEEEecCCCeEEEEECCEECcC---------CCCeEEEEEcCCCcEEEEECCCChhhCEEEEEEEEcCcCeEE
Confidence            344444555667888876433310         0111111111 1124799999999999999999999998643

Ig_Myotilin_C: C-terminal immunoglobulin (Ig)-like domain of myotilin. Mytolin belongs to the palladin-myotilin-myopalladin family. Proteins belonging to the latter family contain multiple Ig-like domains and function as scaffolds, modulating actin cytoskeleton. Myotilin is most abundant in skeletal and cardiac muscle, and is involved in maintaining sarcomere integrity. It binds to alpha-actinin, filamin and actin. Mutations in myotilin lead to muscle disorders.

>cd05866 Ig1_NCAM-2 First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2

Probab=93.49  E-value=0.24  Score=40.34  Aligned_cols=28  Identities=14%  Similarity=0.054  Sum_probs=25.4

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...|.|.++++.+.+.|+|.|.|..|..
T Consensus        55 ~~~L~I~~v~~~D~G~Y~C~A~N~~G~~   82 (92)
T cd05866          55 RSRLTIYNANIEDAGIYRCQATDAKGQT   82 (92)
T ss_pred             eeEEEEecCChHHCEEEEEEEEcCCCcE
Confidence            4579999999999999999999998864

Ig1_NCAM-2: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2 (OCAM/mamFas II, RNCAM). NCAM-2 is organized similarly to NCAM , including five N-terminal Ig-like domains and two fibronectin type III domains. NCAM-2 is differentially expressed in the developing and mature olfactory epithelium (OE), and may function like NCAM, as an adhesion molecule.

>cd07697 IgC_TCR_gamma T cell receptor (TCR) gamma chain constant immunoglobulin domain

Probab=93.42  E-value=0.28  Score=40.14  Aligned_cols=57  Identities=18%  Similarity=0.251  Sum_probs=36.2

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCc----eeecceEEEEee-e-----cCCeEEEEEEEe
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDK----LPVGRNVLTLDR-V-----TESENYTCIAAS  177 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~-l-----~d~g~Y~c~a~n  177 (904)
                      .++.++|.|.|.| .|. ..|+|.++ |..+..+..    +..++ ++.+.. |     +.+..|+|.+.-
T Consensus        15 ~~~~~tL~C~a~gFyP~~I~v~W~kn-g~~~~~~~~~~~~~~~~d-ty~~~S~L~vt~~~~~~~ysC~V~H   83 (96)
T cd07697          15 KQGQGIYLCLLENFFPDVIQVHWREG-NSPSILGSQKSEKDKDND-VYSTTSWLTVTKDSLGKKFRCIYKH   83 (96)
T ss_pred             cCCCEEEEEEEEEEeCCCeEEEEEEC-CEECcCCeEeccEecCCC-EEEEEEEEEECchhCCCeEEEEEEE
Confidence            4577999999999 565 47899999 665543321    11233 555432 2     234569999875

IgC_TCR_gamma; immunoglobulin (Ig) constant (C) domain of the gamma chain of gamma-delta T-cell receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are heterodimers consisting of alpha and beta chains or gamma and delta chains. Each chain contains a variable (V) and a constant (C) region. The majority of T cells contain alpha-beta TCRs but a small subset contain gamma-delta TCRs. Alpha-beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. Gamma-delta TCRs recognize intact protein antigens; they recognize protein antigens directly and without antigen processing, and MHC independently of the bound peptide. Gamma-delta T cells can also be stimulated by non-peptide antigens such as small phosphate- or amine-containing compounds.

>cd05870 Ig5_NCAM-2 Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-2 (also known as OCAM/mamFas II and RNCAM)

Probab=93.33  E-value=0.52  Score=39.09  Aligned_cols=29  Identities=7%  Similarity=0.123  Sum_probs=26.0

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...|.|.++++.+.+.|.|.|.|..|...
T Consensus        63 ~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~   91 (98)
T cd05870          63 ESSLHIKDVKLSDSGRYDCEAASRIGGHQ   91 (98)
T ss_pred             eeEEEEeeCCcCCCEEEEEEEeccCCcce
Confidence            35799999999999999999999999754

Ig5_NCAM-2: the fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-2 (also known as OCAM/mamFas II and RNCAM). NCAM-2 is organized similarly to NCAM , including five N-terminal Ig-like domains and two fibronectin type III domains. NCAM-2 is differentially expressed in the developing and mature olfactory epithelium (OE), and may function like NCAM, as an adhesion molecule.

>cd05730 Ig3_NCAM-1_like Third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)

Probab=93.22  E-value=0.42  Score=39.36  Aligned_cols=28  Identities=25%  Similarity=0.316  Sum_probs=25.4

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++...+.+.|+|.|.|..|...
T Consensus        58 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   85 (95)
T cd05730          58 SEMTILDVDKLDEAEYTCIAENKAGEQE   85 (95)
T ss_pred             CEEEECCCChhhCEEEEEEEEcCCCeEE
Confidence            5699999999999999999999999754

Ig3_NCAM-1_like: domain similar to the third immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-non-NCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1,and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the

>cd05853 Ig6_Contactin-4 Sixth Ig domain of contactin-4

Probab=92.93  E-value=0.28  Score=39.17  Aligned_cols=68  Identities=4%  Similarity=0.245  Sum_probs=43.8

Q ss_pred             CCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeec-ceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771         214 ATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISG-IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT  288 (904)
Q Consensus       214 ~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~  288 (904)
                      .-.+++.|...+..+.     +..  .+..+..+.+ .....|.|.+++..+.+.|+|.|.|..+....+..+.+.
T Consensus        14 ~l~~~~~W~~dg~~i~-----~~~--~~~~~~~~~~~~~~~~L~I~nv~~~dsG~YtC~a~n~~~~~~a~a~L~V~   82 (85)
T cd05853          14 SLDIVFTWSFNGHLID-----FQK--DGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVR   82 (85)
T ss_pred             CCCcEEEEEECCEECc-----ccC--CCccEEEeccCCCCCcEEEecCCHHHCEEEEEEEEcccCceEEEEEEEEe
Confidence            3467788887654442     111  1222322221 233679999999999999999999999886655555543

Ig6_Contactin-4: sixth Ig domain of the neural cell adhesion molecule contactin-4. Contactins are neural cell adhesion molecules, and are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The different contactins show different expression patterns in the central nervous system. Highest expresson of contactin-4 is in testes, thyroid, small intestine, uterus and brain. Contactin-4 plays a role in the response of neuroblastoma cells to differentiating agents, such as retinoids. The contactin 4 gene is associated with cerebellar degeneration in spinocerebellar ataxia type 16.

>cd05760 Ig2_PTK7 Second immunoglobulin (Ig)-like domain of protein tyrosine kinase (PTK) 7, also known as CCK4

Probab=92.85  E-value=0.44  Score=37.35  Aligned_cols=28  Identities=25%  Similarity=0.261  Sum_probs=25.2

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++.+.+.+.|.|.|.|..|...
T Consensus        38 ~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   65 (77)
T cd05760          38 RTLTLRSAGPDDSGLYYCCAHNAFGSVC   65 (77)
T ss_pred             CEEEEeeCCcccCEEEEEEEEeCCCeEe
Confidence            5799999999999999999999999643

Ig2_PTK7: domain similar to the second immunoglobulin (Ig)-like domain in protein tyrosine kinase (PTK) 7, also known as CCK4. PTK7 is a subfamily of the receptor protein tyrosine kinase family, and is referred to as an RPTK-like molecule. RPTKs transduce extracellular signals across the cell membrane, and play important roles in regulating cell proliferation, migration, and differentiation. PTK7 is organized as an extracellular portion having seven Ig-like domains, a single transmembrane region, and a cytoplasmic tyrosine kinase-like domain. PTK7 is considered a pseudokinase as it has several unusual residues in some of the highly conserved tyrosine kinase (TK) motifs; it is predicted to lack TK activity. PTK7 may function as a cell-adhesion molecule. PTK7 mRNA is expressed at high levels in placenta, melanocytes, liver, lung, pancreas, and kidney. PTK7 is overexpressed in s

>cd05773 Ig8_hNephrin_like Eighth immunoglobulin-like domain of nephrin

Probab=92.84  E-value=0.55  Score=39.85  Aligned_cols=28  Identities=29%  Similarity=0.292  Sum_probs=24.4

Q ss_pred             ceEEEcCCC-CCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLS-PYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~-p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..|+|.++. ..+.+.|+|.|.|..|...
T Consensus        69 s~L~I~~v~~~~D~G~Y~C~A~N~~G~~~   97 (109)
T cd05773          69 SILTIINVSAALDYALFTCTAHNSLGEDS   97 (109)
T ss_pred             eEEEECcCCccCCCEEEEEEEEeCCccCc
Confidence            679999997 5889999999999999753

Ig8_hNephrin_like: domain similar to the eighth immunoglobulin-like domain in human nephrin. Nephrin is an integral component of the slit diaphragm, and is a central component of the glomerular ultrafilter. Nephrin plays a structural role, and has a role in signaling. Nephrin is a transmembrane protein having a short intracellular portion, and an extracellular portion comprised of eight Ig-like domains, and one fibronectin type III-like domain. The extracellular portions of nephrin, from neighboring foot processes of separate podocyte cells, may interact with each other, and in association with other components of the slit diaphragm, form a porous molecular sieve within the slit pore. The intracellular portion of nephrin is associated with linker proteins, which connect nephrin to the actin cytoskeleton. The intracellular portion is tyrosine phosphorylated, and mediates signaling from the slit diaphragm into the p

>cd05744 Ig_Myotilin_C_like Immunoglobulin (Ig)-like domain of myotilin, palladin, and myopalladin

Probab=92.77  E-value=0.28  Score=38.18  Aligned_cols=28  Identities=18%  Similarity=0.117  Sum_probs=25.2

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++++.+.+.|+|.|.|..|...
T Consensus        41 ~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   68 (75)
T cd05744          41 ICLLIQNANKEDAGWYTVSAVNEAGVVS   68 (75)
T ss_pred             EEEEECCCCcccCEEEEEEEEcCCCcEE
Confidence            4699999999999999999999998653

Ig_Myotilin_like_C: immunoglobulin (Ig)-like domain in myotilin, palladin, and myopalladin. Myotilin, palladin, and myopalladin function as scaffolds that regulate actin organization. Myotilin and myopalladin are most abundant in skeletal and cardiac muscle; palladin is ubiquitously expressed in the organs of developing vertebrates and plays a key role in cellular morphogenesis. The three family members each interact with specific molecular partners: all three bind to alpha-actinin; in addition, palladin also binds to vasodilator-stimulated phosphoprotein (VASP) and ezrin, myotilin binds to filamin and actin, and myopalladin also binds to nebulin and cardiac ankyrin repeat protein (CARP).

>cd05852 Ig5_Contactin-1 Fifth Ig domain of contactin-1

Probab=92.66  E-value=0.29  Score=37.83  Aligned_cols=28  Identities=21%  Similarity=0.275  Sum_probs=25.6

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++++.+.+.|+|.|.|..|...
T Consensus        39 g~L~I~~v~~~D~G~Y~C~A~N~~G~~~   66 (73)
T cd05852          39 GSLEILNITKLDEGSYTCFAENNRGKAN   66 (73)
T ss_pred             CEEEECcCChhHCEEEEEEEECCCCcee
Confidence            4699999999999999999999999764

Ig5_Contactin-1: fifth Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>cd05742 Ig1_VEGFR_like First immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor (R) and similar proteins

Probab=92.54  E-value=0.42  Score=38.26  Aligned_cols=70  Identities=13%  Similarity=0.094  Sum_probs=41.8

Q ss_pred             eEEEeecC--CeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCC
Q psy8771         207 VKISEVTA--TSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPP  281 (904)
Q Consensus       207 l~~~~~~~--~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~  281 (904)
                      |.+...+.  ..+.+.|..++...........     .............|.|.++++.+.+.|+|.|.|..|....
T Consensus         6 L~C~~~g~~~~~~~i~W~~~~~~~~~~~~~~~-----~~~~~~~~~~~s~L~I~~v~~~DsG~Y~C~a~n~~~~~~~   77 (84)
T cd05742           6 LNCTVLTELNEGVDFQWTYPGKKRGRGKSMVT-----RQSLSEATELSSTLTIPNATLKDSGTYTCAASSGTMDQKE   77 (84)
T ss_pred             EEEEEEeCCCccEEEEEecCCcccCCceEeec-----ccccccceEEEEEEEECCCChhhCEEEEEEEccCCCceEE
Confidence            44555555  5678889876433221111000     0000011123467999999999999999999999887543

Ig1_VEGFR_like: first immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor(R) related proteins. The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGF-A interacts with both VEGFR-1 and VEGFR-2. VEGFR-1 binds strongest to VEGF, VEGF-2 binds more weakly. VEGFR-3 appears not to bind VEGF, but binds other members of the VEGF family (VEGF-C and -D). VEGFRs bind VEGFs with high affinity with the IG-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGF

>cd05725 Ig3_Robo Third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=92.50  E-value=0.28  Score=37.46  Aligned_cols=27  Identities=22%  Similarity=0.217  Sum_probs=24.8

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++++.+.+.|+|.|.|..|..
T Consensus        35 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~   61 (69)
T cd05725          35 KSLKIRNVTAGDEGSYTCEAENMVGKI   61 (69)
T ss_pred             CEEEECcCChhHCEEEEEEEEcCCCcE
Confidence            569999999999999999999999864

Ig3_Robo: domain similar to the third immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagoni

>cd05876 Ig3_L1-CAM Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=92.30  E-value=0.27  Score=37.81  Aligned_cols=29  Identities=17%  Similarity=0.166  Sum_probs=25.8

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.++.+.+.+.|+|.|.|..|...
T Consensus        35 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   63 (71)
T cd05876          35 NKTLQLDNVLESDDGEYVCTAENSEGSAR   63 (71)
T ss_pred             CCEEEEcccCHHhCEEEEEEEEcCCCeEE
Confidence            36799999999999999999999999643

Ig3_L1-CAM: third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains, five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM.

>TIGR00868 hCaCC calcium-activated chloride channel protein 1

Probab=92.19  E-value=30  Score=40.96  Aligned_cols=84  Identities=15%  Similarity=0.135  Sum_probs=52.7

Q ss_pred             CCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC----CccEEE----Eec------CcceEEecCC--C
Q psy8771         720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD----SEASIV----TLK------NQTSFVLDEL--K  783 (904)
Q Consensus       720 P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~----~~~~~~----~~~------~~~~~~i~~L--~  783 (904)
                      ..+|++.. ....|.|+|.+|-.+...|...+|.|.+...-.+.    .....+    .++      ....+...+.  +
T Consensus       759 ItDL~~~~-~~~~v~LsWTAPG~d~D~G~a~~y~ir~s~~~~~l~~~f~~a~~vn~~~~~P~~ags~e~~~f~~~~~~~~  837 (863)
T TIGR00868       759 ITDLEAGF-QGDNIILTWTAPGDVLDHGRADRYIIRISTSILDLRDDFNDATQVNTTDLIPKEANSKEVFVFKPEGIPIE  837 (863)
T ss_pred             ceeeEEee-cCCEEEEEeeCCCccCCCCccceEEEEecCCHHHHHhhhccccccccCCcCCCCCCceeEEEEeCCccccc
Confidence            35666643 55669999999988778899999999997642110    000000    011      2223334443  3


Q ss_pred             CCceEEEEEEEeeCCCC-CCCC
Q psy8771         784 KWTEYRIWVLAGTSIGD-GPSS  804 (904)
Q Consensus       784 p~t~Y~~~V~a~~~~g~-g~~s  804 (904)
                      .++.|.|-|+|++..|. |..|
T Consensus       838 ~~~~~~~ai~a~d~~~~~s~~s  859 (863)
T TIGR00868       838 NGTDLFIAVQAIDKANLTSEVS  859 (863)
T ss_pred             CCeEEEEEEEEEcccccccccc
Confidence            57899999999998763 4434

distributions. found a row in 1A13.INFO that was not parsed out

>cd04971 Ig_TrKABC_d5 Fifth domain (immunoglobulin-like) of Trk receptors TrkA, TrkB and TrkC

Probab=92.01  E-value=0.61  Score=36.92  Aligned_cols=29  Identities=14%  Similarity=0.241  Sum_probs=25.9

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.++.+.+.+.|+|.|.|..|...
T Consensus        45 ~~~L~I~~~~~~D~G~YtC~A~N~~G~~~   73 (81)
T cd04971          45 HGCLQFDNPTHVNNGNYTLVASNEYGQDS   73 (81)
T ss_pred             EEEEEECCCCcccCeEEEEEEEeCCCCee
Confidence            35799999999999999999999999754

TrkABC_d5: the fifth domain of Trk receptors TrkA, TrkB and TrkC, this is an immunoglobulin (Ig)-like domain which binds to neurotrophin. The Trk family of receptors are tyrosine kinase receptors. They are activated by dimerization, leading to autophosphorylation of intracellular tyrosine residues, and triggering the signal transduction pathway. TrkA, TrkB, and TrkC share significant sequence homology and domain organization. The first three domains are leucine-rich domains. The fourth and fifth domains are Ig-like domains playing a part in ligand binding. TrkA, Band C mediate the trophic effects of the neurotrophin Nerve growth factor (NGF) family. TrkA is recognized by NGF. TrkB is recognized by brain-derived neurotrophic factor (BDNF) and neurotrophin (NT)-4. TrkC is recognized by NT-3. NT-3 is promiscuous as in some cell systems it activates TrkA and TrkB receptors. TrkA is a receptor foun

>cd05736 Ig2_Follistatin_like Second immunoglobulin (Ig)-like domain of a follistatin-like molecule encoded by the Mahya gene and similar proteins

Probab=91.95  E-value=0.72  Score=35.96  Aligned_cols=30  Identities=17%  Similarity=0.101  Sum_probs=26.4

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPS  282 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s  282 (904)
                      ..+.|.++++.+.+.|+|.|.|..|....+
T Consensus        39 ~~l~I~~~~~~D~G~Y~C~a~N~~G~~~~~   68 (76)
T cd05736          39 SELHISNVRYEDTGAYTCIAKNEAGVDEDI   68 (76)
T ss_pred             CEEEECcCCcccCEEEEEEEEcCCCCcceE
Confidence            569999999999999999999999976533

Ig2_Follistatin_like: domain similar to the second immunoglobulin (Ig)-like domain found in a follistatin-like molecule encoded by the CNS-related Mahya gene. Mahya genes have been retained in certain Bilaterian branches during evolution. They are conserved in Hymenoptera and Deuterostomes, but are absent from other metazoan species such as fruit fly and nematode. Mahya proteins are secretory, with a follistatin-like domain (Kazal-type serine/threonine protease inhibitor domain and EF-hand calcium-binding domain), two Ig-like domains, and a novel C-terminal domain. Mahya may be involved in learning and memory and in processing of sensory information in Hymenoptera and vertebrates. Follistatin is a secreted, multidomain protein that binds activins with high affinity and antagonizes their signaling.

>cd05867 Ig4_L1-CAM_like Fourth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=91.81  E-value=0.35  Score=37.82  Aligned_cols=27  Identities=15%  Similarity=0.102  Sum_probs=24.8

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++++.+.+.|+|.|.|..|..
T Consensus        41 ~~L~I~~~~~~D~G~Y~C~a~N~~G~~   67 (76)
T cd05867          41 GALILTDVQPSDTAVYQCEARNRHGNL   67 (76)
T ss_pred             CEEEECCCChhhCEEEEEEEECCCCeE
Confidence            569999999999999999999998864

Ig4_L1-CAM_like: fourth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM.

>cd05868 Ig4_NrCAM Fourth immunoglobulin (Ig)-like domain of NrCAM (NgCAM-related cell adhesion molecule)

Probab=91.79  E-value=0.29  Score=38.22  Aligned_cols=30  Identities=10%  Similarity=-0.001  Sum_probs=25.7

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPS  282 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s  282 (904)
                      ..+.|.++++.+.+.|+|.|.|..|....+
T Consensus        41 ~~l~i~~v~~~D~G~Y~C~A~N~~G~~~~~   70 (76)
T cd05868          41 DTIIFSKVQERSSAVYQCNASNEYGYLLAN   70 (76)
T ss_pred             CEEEECCCCHhhCEEEEEEEEcCCCEEEEE
Confidence            468899999999999999999999975433

Ig4_ NrCAM: fourth immunoglobulin (Ig)-like domain of NrCAM (NgCAM-related cell adhesion molecule). NrCAM belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six IG-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. NrCAM is primarily expressed in the nervous system.

>cd04985 IgC_CH1 CH1 domain (first constant Ig domain of the heavy chain) in immunoglobulin

Probab=91.73  E-value=0.97  Score=37.06  Aligned_cols=58  Identities=19%  Similarity=0.382  Sum_probs=36.0

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCC----ceeecceEEEEee-e----c---CCeEEEEEEEec
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDD----KLPVGRNVLTLDR-V----T---ESENYTCIAASV  178 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~----~~~~~~~~l~i~~-l----~---d~g~Y~c~a~n~  178 (904)
                      .++.++|.|.+.| .|. ..|+|.|+ |.. ..+.    ....+++.+.+.. |    .   .+..|+|.+...
T Consensus        15 ~~~~~~L~C~a~gFyP~~i~vtW~k~-g~~-~~~~~~~~~~~~~dgty~~~s~L~v~~~~w~~~~~ytC~V~H~   86 (95)
T cd04985          15 SSDSVTLGCLATGFLPEPVTFTWNSG-SNS-TSGVKTYPAVLQSGGLYTASSQLTVPASEWKGKESFYCKVEHP   86 (95)
T ss_pred             CCCcEEEEEEEeeEECCCcEEEEeEC-CEE-CCCcEECCCEeCCCCCEEEEEEEEEeHHHcCCCCcEEEEEEeC
Confidence            4567999999999 564 57899999 554 2221    1111245544432 2    2   367799998753

IgC_CH1: The first immunoglobulin constant domain (IgC), of immunoglobulin (Ig) heavy chains. This domain is found on the Fab antigen-binding fragment. The basic structure of Ig molecules is a tetramer of two light chains and two heavy chains linked by disulfide bonds. There are two types of light chains: kappa and lambda; each composed of a constant domain and a variable domain. There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are modular proteins, in which the variable and constant domains have clear, conserved sequence patterns.

>cd05750 Ig_Pro_neuregulin Immunoglobulin (Ig)-like domain in neuregulins (NRGs)

Probab=91.64  E-value=0.74  Score=35.72  Aligned_cols=28  Identities=14%  Similarity=0.158  Sum_probs=25.4

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.|.++++.+.+.|+|.|.|..|..
T Consensus        42 ~~~L~I~~~~~~D~G~Y~C~a~N~~G~~   69 (75)
T cd05750          42 NSELQINKAKLADSGEYTCVVENILGND   69 (75)
T ss_pred             eEEEEEccCCcccCeEEEEEEEEcCCce
Confidence            4679999999999999999999999864

Ig_Pro_neuregulin: immunoglobulin (Ig)-like domain in neuregulins (NRGs). NRGs are signaling molecules, which participate in cell-cell interactions in the nervous system, breast, heart, and other organ systems, and are implicated in the pathology of diseases including schizophrenia, multiple sclerosis, and breast cancer. There are four members of the neuregulin gene family (NRG1, -2, -3, and -4). The NRG-1 protein, binds to and activates the tyrosine kinases receptors ErbB3 and ErbB4, initiating signaling cascades. The other NRGs proteins bind one or the other or both of these ErbBs. NRG-1 has multiple functions; for example, in the brain it regulates various processes such as radial glia formation and neuronal migration, dendritic development, and expression of neurotransmitters receptors; in the peripheral nervous system NRG-1 regulates processes such as target cell differentiation, and Schwann cell surv

>cd05737 Ig_Myomesin_like_C C-temrinal immunoglobulin (Ig)-like domain of myomesin and M-protein

Probab=91.64  E-value=0.93  Score=37.03  Aligned_cols=28  Identities=18%  Similarity=0.247  Sum_probs=25.3

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.|.++.+.+.+.|+|.|.|..|..
T Consensus        57 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~   84 (92)
T cd05737          57 YASLTIKGVSSEDSGKYGIVVKNKYGGE   84 (92)
T ss_pred             EEEEEEccCChhhCEEEEEEEEECCCcc
Confidence            3579999999999999999999999864

Ig_Myomesin_like_C: domain similar to the C-temrinal immunoglobulin (Ig)-like domain of myomesin and M-protein. Myomesin and M-protein are both structural proteins localized to the M-band, a transverse structure in the center of the sarcomere, and are candidates for M-band bridges. Both proteins are modular, consisting mainly of repetitive Ig-like and fibronectin type III (FnIII) domains. Myomesin is expressed in all types of vertebrate striated muscle; M-protein has a muscle-type specific expression pattern. Myomesin is present in both slow and fast fibers; M-protein is present only in fast fibers. It has been suggested that myomesin acts as a molecular spring with alternative splicing as a means of modifying its elasticity.

>cd04970 Ig6_Contactin_like Sixth Ig domain of contactin

Probab=91.53  E-value=0.51  Score=37.85  Aligned_cols=31  Identities=13%  Similarity=0.003  Sum_probs=26.6

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS  282 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s  282 (904)
                      ...+.|.+++..+.+.|+|.|.|..|....+
T Consensus        46 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~   76 (85)
T cd04970          46 NGDLMIRNAQLKHAGKYTCTAQTVVDSLSAS   76 (85)
T ss_pred             cceEEEccCCHHhCeeeEEEEecCCCcEEEE
Confidence            4679999999999999999999998865433

Ig6_Contactin_like: Sixth Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>cd05863 Ig2_VEGFR-3 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 3 (VEGFR-3)

Probab=91.44  E-value=0.34  Score=36.62  Aligned_cols=27  Identities=4%  Similarity=0.097  Sum_probs=24.8

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++...+.+.|+|.|.|..|..
T Consensus        31 ~~L~i~~v~~~D~G~YtC~a~N~~g~~   57 (67)
T cd05863          31 HSLQIKDVTEASAGTYTLVLWNSAAGL   57 (67)
T ss_pred             CEEEECCCCHHHCEEEEEEEEECCccE
Confidence            679999999999999999999998853

Ig2_VEGFR-3: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 3 (VEGFR-3). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-3 (Flt-4) binds two members of the VEGF family (VEGF-C and -D) and is involved in tumor angiogenesis and growth.

>cd05763 Ig_1 Subgroup of the immunoglobulin (Ig) superfamily

Probab=91.35  E-value=0.64  Score=36.15  Aligned_cols=28  Identities=11%  Similarity=0.044  Sum_probs=24.9

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++++.+.+.|+|.|.|..|...
T Consensus        40 ~~L~I~~~~~~D~G~Y~C~A~N~~G~~~   67 (75)
T cd05763          40 DVFFIVDVKIEDTGVYSCTAQNTAGSIS   67 (75)
T ss_pred             CEEEEeeCCcccCEEEEEEEEcCCCEEE
Confidence            4689999999999999999999988643

Ig_1: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd05732 Ig5_NCAM-1_like Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM) and similar proteins

Probab=91.34  E-value=0.41  Score=39.52  Aligned_cols=29  Identities=14%  Similarity=0.178  Sum_probs=26.0

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.+++..+.+.|.|.|.|..|...
T Consensus        61 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   89 (96)
T cd05732          61 VSSLTLKDVQLTDAGRYDCEASNRIGGDQ   89 (96)
T ss_pred             EEEEEECcCCcCcCEEeEEEEEeCCCCcE
Confidence            46799999999999999999999999753

Ig5_NCAM-1 like: domain similar to the fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-non-NCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM mole

>cd05721 IgV_CTLA-4 Immunoglobulin (Ig) domain of cytotoxic T lymphocyte-associated antigen 4 (CTLA-4)

Probab=91.32  E-value=1.3  Score=37.26  Aligned_cols=62  Identities=15%  Similarity=0.186  Sum_probs=41.6

Q ss_pred             eEEecCCCeEEEEEEccCCC---CeEEEeeCCccccC--------------CCCceee------cceEEEEeee--cCCe
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM---PFVKWRKGQNIELT--------------PDDKLPV------GRNVLTLDRV--TESE  169 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~---p~i~W~k~~~~~~~--------------~~~~~~~------~~~~l~i~~l--~d~g  169 (904)
                      ..+..|..++|.|+++|.-.   -.+.|.|.....++              ...|+..      +.-.|.|.+|  +|.+
T Consensus         8 ~lv~p~~sv~LsC~~sg~~~s~e~~~~wvRq~pg~lE~c~~~~~~g~~~~~~~~r~tcs~~~s~ntv~L~l~~L~a~DTa   87 (115)
T cd05721           8 VLASSNGAASLVCEYTYNGFSKEFRASLLKGADSAVEVCAVTGNMSNQLQTSLDGFNCDGTLGNEQVNFTLQNLRANQTD   87 (115)
T ss_pred             eEEcCCCCEEEEEEecCCccccEEEEEEEEeCCCCcEEEEEEeCCCccccccCCCeEEeEeCCCCEEEEEEcCCCHHHCe
Confidence            77788999999999987544   35789984222210              1122221      2237999999  6999


Q ss_pred             EEEEEEE
Q psy8771         170 NYTCIAA  176 (904)
Q Consensus       170 ~Y~c~a~  176 (904)
                      .|.|..+
T Consensus        88 ~Y~Ca~e   94 (115)
T cd05721          88 IYFCKIE   94 (115)
T ss_pred             EEEEEee
Confidence            9999763

IgV_CTLA-4: domain similar to the variable(v)-type immunoglobulin (Ig) domain found in cytotoxic T lymphocyte-associated antigen 4 (CTLA-4). CTLA-4 is involved in the regulation of T cell response, acting as an inhibitor of intracellular signalling. CTLA-4 is similar to CD28, a T cell co-receptor protein that recognizes the B7 proteins (CD80 and CD86). CD28 binding of the B7 proteins occurs after the presentation of antigen to the T cell receptor (TCR) via the peptide-MHC complex on the surface of an antigen presenting cell (APC). CTLA-4 also binds the B7 molecules with a higher affinity than does CD28. The B7/CTLA-4 interaction generates inhibitory signals down-regulating the response, and may prevent T cell activation by weak TCR signals. CD28 and CTLA-4 then elicit opposing signals in the regulation of T cell responsiveness and homeostasis. T cell activation leads to increased

>cd05723 Ig4_Neogenin Fourth immunoglobulin (Ig)-like domain in neogenin and similar proteins

Probab=91.22  E-value=0.44  Score=36.58  Aligned_cols=28  Identities=25%  Similarity=0.170  Sum_probs=24.1

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++++.+.+.|+|.|.|..|...
T Consensus        37 ~~l~i~~v~~~D~G~Y~C~A~N~~G~~~   64 (71)
T cd05723          37 HNLQVLGLVKSDEGFYQCIAENDVGNVQ   64 (71)
T ss_pred             CCEEEEcCCcccCEEEEEEEEcCCCEEE
Confidence            3477889999999999999999998754

Ig4_Neogenin: fourth immunoglobulin (Ig)-like domain in neogenin and related proteins. Neogenin is a cell surface protein which is expressed in the developing nervous system of vertebrate embryos in the growing nerve cells. It is also expressed in other embryonic tissues, and may play a general role in developmental processes such as cell migration, cell-cell recognition, and tissue growth regulation. Included in this group is the tumor suppressor protein DCC, which is deleted in colorectal carcinoma . DCC and neogenin each have four Ig-like domains followed by six fibronectin type III domains, a transmembrane domain, and an intracellular domain.

>cd04973 Ig1_FGFR First immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR)

Probab=91.22  E-value=0.84  Score=35.95  Aligned_cols=27  Identities=7%  Similarity=0.126  Sum_probs=24.1

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++++.+.+.|+|.|.|..|..
T Consensus        45 ~~L~I~~~~~~DsG~Y~C~a~n~~g~~   71 (79)
T cd04973          45 EEVQIKDAVPRDSGLYACVTSSPSGSD   71 (79)
T ss_pred             CEEEECCCChhhCEEEEEEEeCCCCcc
Confidence            468999999999999999999988753

Ig1_FGFR: The first immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for all FGFs.

>cd05745 Ig3_Peroxidasin Third immunoglobulin (Ig)-like domain of peroxidasin

Probab=91.09  E-value=0.45  Score=36.94  Aligned_cols=28  Identities=14%  Similarity=0.125  Sum_probs=25.3

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++++.+.+.|+|.|.|..|...
T Consensus        40 ~~L~I~~v~~~D~G~Y~C~A~N~~G~~~   67 (74)
T cd05745          40 GTLRISRVALHDQGQYECQAVNIVGSQR   67 (74)
T ss_pred             CeEEEeeCCHHhCEEEEEEEEeCCCcee
Confidence            5799999999999999999999998643

Ig3_Peroxidasin: the third immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells which have undergone programmed cell death, and protection of the organism against non-self.

>cd05891 Ig_M-protein_C C-terminal immunoglobulin (Ig)-like domain of M-protein (also known as myomesin-2)

Probab=90.89  E-value=0.92  Score=37.03  Aligned_cols=28  Identities=14%  Similarity=0.217  Sum_probs=25.3

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++++.+.+.|+|.|.|..|...
T Consensus        58 ~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   85 (92)
T cd05891          58 ASLTIKGVTSEDSGKYSINVKNKYGGET   85 (92)
T ss_pred             EEEEECCCChhhCEEEEEEEEeCCCcee
Confidence            4799999999999999999999998754

Ig_M-protein_C: the C-terminal immunoglobulin (Ig)-like domain of M-protein (also known as myomesin-2). M-protein is a structural protein localized to the M-band, a transverse structure in the center of the sarcomere, and is a candidate for M-band bridges. M-protein is modular consisting mainly of repetitive IG-like and fibronectin type III (FnIII) domains, and has a muscle-type specific expression pattern. M-protein is present in fast fibers.

>cd05726 Ig4_Robo Fhird immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=90.72  E-value=1.3  Score=36.00  Aligned_cols=35  Identities=11%  Similarity=-0.017  Sum_probs=28.4

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEE
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVI  287 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~  287 (904)
                      ..++|.++++.+.+.|.|.|.|..|.......+.+
T Consensus        47 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V   81 (90)
T cd05726          47 GDLTITNVQRSDVGYYICQTLNVAGSILTKAYLEV   81 (90)
T ss_pred             CeEEEeeCChhhCEEEEEEEEcCCCceEEEEEEEE
Confidence            46999999999999999999999997554433433

Ig4_Robo: domain similar to the fhird immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antagoni

>cd04978 Ig4_L1-NrCAM_like Fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related)

Probab=90.64  E-value=0.46  Score=37.08  Aligned_cols=29  Identities=17%  Similarity=0.041  Sum_probs=25.7

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.++++.+.+.|+|.|.|..|...
T Consensus        40 ~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~   68 (76)
T cd04978          40 GGTLILSNVQPNDTAVYQCNASNVHGYLL   68 (76)
T ss_pred             CCEEEECCCChhhCEEEEEEEEccCCeEE
Confidence            36799999999999999999999988753

Ig4_L1-NrCAM_like: fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related). These proteins belong to the L1 subfamily of cell adhesion molecules (CAMs) and are comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. These molecules are primarily expressed in the nervous system. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth.

>cd05865 Ig1_NCAM-1 First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1

Probab=90.59  E-value=0.94  Score=37.30  Aligned_cols=28  Identities=14%  Similarity=0.080  Sum_probs=24.6

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCC-CCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNL-GRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~-g~s~  280 (904)
                      ..|.|.++++.+.+.|+|.|.|.. |.+.
T Consensus        60 ~~L~I~~v~~~D~G~YtC~A~N~~~g~~~   88 (96)
T cd05865          60 STLTIYNANIDDAGIYKCVVSNEDEGESE   88 (96)
T ss_pred             eEEEEeccChhhCEEEEEEEEcCCCCcEE
Confidence            679999999999999999999997 5543

Ig1_NCAM-1: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1. NCAM-1 plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-nonNCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves the Ig1, Ig2, and Ig3 domains. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (trans

>cd05869 Ig5_NCAM-1 Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)

Probab=90.54  E-value=0.78  Score=37.92  Aligned_cols=29  Identities=17%  Similarity=0.269  Sum_probs=25.8

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.+++..+.+.|+|.|.|..|...
T Consensus        62 ~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~   90 (97)
T cd05869          62 VSSLTLKYIQYTDAGEYLCTASNTIGQDS   90 (97)
T ss_pred             EEEEEEecCccCcCEEEEEEEecCCCCee
Confidence            35799999999999999999999999753

Ig5_NCAM-1: The fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM). NCAM plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM) and heterophilic (NCAM-non-NCAM) interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves Ig1, Ig2, and Ig3. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the surface of opposing cells (tr

>PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators

Probab=90.51  E-value=1.2  Score=33.57  Aligned_cols=45  Identities=20%  Similarity=0.266  Sum_probs=27.7

Q ss_pred             eeeeeeec-CCceEEecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCC
Q psy8771         836 NFKGGYLN-DPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDG  882 (904)
Q Consensus       836 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g  882 (904)
                      .+.|.+.+ +..+... ......+.+++|.|| .|+|+|+|.+..|..
T Consensus         9 ~Y~Y~l~g~d~~W~~~-~~~~~~~~~~~L~~G-~Y~l~V~a~~~~~~~   54 (66)
T PF07495_consen    9 RYRYRLEGFDDEWITL-GSYSNSISYTNLPPG-KYTLEVRAKDNNGKW   54 (66)
T ss_dssp             EEEEEEETTESSEEEE-SSTS-EEEEES--SE-EEEEEEEEEETTS-B
T ss_pred             EEEEEEECCCCeEEEC-CCCcEEEEEEeCCCE-EEEEEEEEECCCCCc
Confidence            34454443 3444443 222239999999999 899999999988754

However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.

>PF07354 Sp38: Zona-pellucida-binding protein (Sp38); InterPro: IPR010857 This family contains a number of zona-pellucida-binding proteins that seem to be restricted to mammals

Probab=90.31  E-value=0.46  Score=45.72  Aligned_cols=46  Identities=17%  Similarity=0.281  Sum_probs=38.6

Q ss_pred             CCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecC
Q psy8771         134 MPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       134 ~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      -|...|..++|..+..+.++.+ ..|.|.+.+.  +++|.|+|++....
T Consensus        12 DP~y~W~GP~g~~l~gn~~~nIT~TG~L~~~~F~esmSG~YTCtLsYk~   60 (271)
T PF07354_consen   12 DPTYLWTGPNGKPLSGNSYVNITETGKLMFKNFQESMSGSYTCTLSYKP   60 (271)
T ss_pred             CCceEEECCCCcccCCCCeEEEccCceEEeeccccccCCceEEEEEEEe
Confidence            4678999987888888888887 6789999999  69999999987533

These are sperm proteins that bind to the 90 kDa family of zona pellucida glycoproteins in a calcium-dependent manner []. These represent some of the specific molecules that mediate the first steps of gamete interaction, allowing fertilisation to occur [].; GO: 0007339 binding of sperm to zona pellucida, 0005576 extracellular region

>cd05740 Ig_CEACAM_D4 Fourth immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)

Probab=90.28  E-value=1.1  Score=36.49  Aligned_cols=27  Identities=15%  Similarity=0.078  Sum_probs=25.0

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.+++..+.+.|+|.|.|..|..
T Consensus        55 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~   81 (91)
T cd05740          55 RTLTFNNVTRSDTGHYQCEASNEVSNM   81 (91)
T ss_pred             CEEEECcCChhhCEEEEEEEEcCCCCE
Confidence            579999999999999999999999864

Ig_CEACAM_D4: immunoglobulin (Ig)-like domain 4 in carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) protein subfamily. The CEA family is a group of anchored or secreted glycoproteins, expressed by epithelial cells, leukocytes, endothelial cells and placenta. The CEA family is divided into the CEACAM and pregnancy-specific glycoprotein (PSG) subfamilies. This group represents the CEACAM subfamily. CEACAM1 has many important cellular functions, it is a cell adhesion molecule, and a signaling molecule that regulates the growth of tumor cells, it is an angiogenic factor, and is a receptor for bacterial and viral pathogens, including mouse hepatitis virus (MHV). In mice, four isoforms of CEACAM1 generated by alternative splicing have either two [D1, D4] or four [D1-D4] Ig-like domains on the cell surface. This family corresponds to the

>cd05895 Ig_Pro_neuregulin-1 Immunoglobulin (Ig)-like domain found in neuregulin (NRG)-1

Probab=90.18  E-value=0.99  Score=35.17  Aligned_cols=29  Identities=14%  Similarity=0.176  Sum_probs=25.7

Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ....|.|.++.+.+.+.|+|.|.|..|..
T Consensus        42 ~~~~L~I~~~~~~DsG~Y~C~a~N~~g~~   70 (76)
T cd05895          42 KSSELQISKASLADNGEYKCMVSSKLGND   70 (76)
T ss_pred             cEEEEEECcCCcccCEEEEEEEEeCCCce
Confidence            34679999999999999999999999864

Ig_Pro_neuregulin-1: immunoglobulin (Ig)-like domain found in neuregulin (NRG)-1. There are many NRG-1 isoforms which arise from the alternative splicing of mRNA. NRG-1 belongs to the neuregulin gene family, which is comprised of four genes. This group represents NRG-1. NRGs are signaling molecules, which participate in cell-cell interactions in the nervous system, breast, and heart, and other organ systems, and are implicated in the pathology of diseases including schizophrenia, multiple sclerosis, and breast cancer. The NRG-1 protein binds to and activates the tyrosine kinases receptors ErbB3 and ErbB4, initiating signaling cascades. NRG-1 has multiple functions; for example, in the brain it regulates various processes such as radial glia formation and neuronal migration, dendritic development, and expression of neurotransmitters receptors; in the peripheral nervous system NRG-1 regulates process

>PF09067 EpoR_lig-bind: Erythropoietin receptor, ligand binding; InterPro: IPR015152 Members of this entry include the growth hormone and erythropoietin receptors

Probab=90.12  E-value=0.91  Score=37.73  Aligned_cols=79  Identities=19%  Similarity=0.377  Sum_probs=55.3

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee---cCceE-----EEEc--CCCCCC
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV---DNNQL-----TTIS--DLTPHT  550 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~--~L~p~t  550 (904)
                      |+..|.++.....+...++.-|++....+.. ..|.+.|....    ..|+.-..   ....+     +.+.  +..-.+
T Consensus         7 ~p~~P~~~~C~S~~~etftC~W~~g~~~~l~-~~y~L~Y~~~~----~~~~eCp~~~~~~~ns~~~~~C~F~~~~t~lf~   81 (104)
T PF09067_consen    7 PPEKPENLKCFSREMETFTCFWEPGSEGNLP-TNYTLFYKKEG----EEWKECPDYSTSGPNSTVRHICYFPKSDTSLFV   81 (104)
T ss_dssp             HCCCCEEEEEEBSSSS-EEEEEEEESSSTST-CEEEEEEEETT----SEEEEESESSTTETTEEEEEEEEE-CCGCSSSS
T ss_pred             CCCCCccCccCCCCCCcEEEEeeCCCCCCCC-CcEEEEEEeCC----CCCccCCCeEecCCCCceeEEEEcCCCCeEEEE
Confidence            5678899999998989999999997654433 34999999875    23333222   12223     4454  778889


Q ss_pred             eEEEEEEEEeCCCC
Q psy8771         551 IYTIRVQAFTSVGP  564 (904)
Q Consensus       551 ~Y~~~V~a~~~~g~  564 (904)
                      .|.|+|.+.|..|.
T Consensus        82 ~y~i~V~a~~~~~~   95 (104)
T PF09067_consen   82 PYCIQVEATNALGS   95 (104)
T ss_dssp             EEEEEEEEEETTEE
T ss_pred             EEEEEEEeccCCCc
Confidence            99999999998763

The latter interacts with erythropoietin (EPO), with subsequent initiation of the downstream chain of events associated with binding of EPO to the receptor, including EPO-induced erythroblast proliferation and differentiation through induction of the JAK2/STAT5 signalling cascade. The domain adopts a secondary structure composed of a short amino-terminal helix, followed by two beta-sandwich regions []. ; PDB: 3NCB_B 3NCF_B 3NCE_B 3N0P_B 3NCC_B 1BP3_B 3N06_B 3MZG_B 3D48_R 1F6F_C ....

>PF09067 EpoR_lig-bind: Erythropoietin receptor, ligand binding; InterPro: IPR015152 Members of this entry include the growth hormone and erythropoietin receptors

Probab=90.02  E-value=1.4  Score=36.57  Aligned_cols=78  Identities=18%  Similarity=0.206  Sum_probs=55.3

Q ss_pred             CCCCCCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCeEEee---cceece-----EEEc--CCCCCCeE
Q psy8771         199 TLPVAPLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPYSEIS---GIITTY-----YTVR--NLSPYTEY  266 (904)
Q Consensus       199 ~~P~~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~~~~~---~~~~~~-----~~i~--~L~p~~~Y  266 (904)
                      .+|..|.++.+.......++|-|+++  ...-..|.+.|...+  ..+..-.   .....+     +.+.  ++.-...|
T Consensus         6 ~~p~~P~~~~C~S~~~etftC~W~~g~~~~l~~~y~L~Y~~~~--~~~~eCp~~~~~~~ns~~~~~C~F~~~~t~lf~~y   83 (104)
T PF09067_consen    6 LPPEKPENLKCFSREMETFTCFWEPGSEGNLPTNYTLFYKKEG--EEWKECPDYSTSGPNSTVRHICYFPKSDTSLFVPY   83 (104)
T ss_dssp             HHCCCCEEEEEEBSSSS-EEEEEEEESSSTSTCEEEEEEEETT--SEEEEESESSTTETTEEEEEEEEE-CCGCSSSSEE
T ss_pred             cCCCCCccCccCCCCCCcEEEEeeCCCCCCCCCcEEEEEEeCC--CCCccCCCeEecCCCCceeEEEEcCCCCeEEEEEE
Confidence            36788999999999999999999987  222344999999864  4444421   111123     5554  88999999


Q ss_pred             EEEEEEEcCCCC
Q psy8771         267 EFYIIAVNNLGR  278 (904)
Q Consensus       267 ~~~v~a~n~~g~  278 (904)
                      .++|.|.|..|.
T Consensus        84 ~i~V~a~~~~~~   95 (104)
T PF09067_consen   84 CIQVEATNALGS   95 (104)
T ss_dssp             EEEEEEEETTEE
T ss_pred             EEEEEeccCCCc
Confidence            999999998774

The latter interacts with erythropoietin (EPO), with subsequent initiation of the downstream chain of events associated with binding of EPO to the receptor, including EPO-induced erythroblast proliferation and differentiation through induction of the JAK2/STAT5 signalling cascade. The domain adopts a secondary structure composed of a short amino-terminal helix, followed by two beta-sandwich regions []. ; PDB: 3NCB_B 3NCF_B 3NCE_B 3N0P_B 3NCC_B 1BP3_B 3N06_B 3MZG_B 3D48_R 1F6F_C ....

>cd05731 Ig3_L1-CAM_like Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

Probab=89.95  E-value=0.41  Score=36.69  Aligned_cols=27  Identities=26%  Similarity=0.330  Sum_probs=24.6

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.+++..+.+.|+|.|.|..|..
T Consensus        36 ~~L~i~~v~~~D~G~Y~C~a~N~~G~~   62 (71)
T cd05731          36 KTLKIDNVSEEDDGEYRCTASNSLGSA   62 (71)
T ss_pred             CEEEECCCCHHHCEEEEEEEEeCCceE
Confidence            579999999999999999999999864

Ig3_L1-CAM_like: domain similar to the third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains the chicken neuron-glia cell adhesion molecule, Ng-CAM and human neurofascin.

>cd05746 Ig4_Peroxidasin Fourth immunoglobulin (Ig)-like domain of peroxidasin

Probab=89.29  E-value=0.71  Score=35.16  Aligned_cols=28  Identities=18%  Similarity=0.373  Sum_probs=25.4

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++++.+.+.|+|.|.|..|...
T Consensus        36 ~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   63 (69)
T cd05746          36 GYLAIRDVGVADQGRYECVARNTIGYAS   63 (69)
T ss_pred             CEEEECcCChhhCEEEEEEEECCCCcEE
Confidence            5799999999999999999999999753

Ig4_Peroxidasin: the fourth immunoglobulin (Ig)-like domain in peroxidasin. Peroxidasin has a peroxidase domain and interacting extracellular motifs containing four Ig-like domains. It has been suggested that peroxidasin is secreted, and has functions related to the stabilization of the extracellular matrix. It may play a part in various other important processes such as removal and destruction of cells, which have undergone programmed cell death, and protection of the organism against non-self.

>cd04975 Ig4_SCFR_like Fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR) and similar proteins

Probab=89.18  E-value=1.1  Score=37.37  Aligned_cols=28  Identities=11%  Similarity=0.059  Sum_probs=25.5

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...|.|..+++.+.+.|+|.|.|..|..
T Consensus        64 ~~~L~i~~v~~~D~G~Ytc~A~N~~G~~   91 (101)
T cd04975          64 VSELKLVRLKESEAGTYTFLASNSDASK   91 (101)
T ss_pred             EEEEEEeecCHhhCeeEEEEEECCCccE
Confidence            3679999999999999999999999864

Ig4_SCFR_like; fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR). In addition to SCFR this group also includes the fourth Ig domain of platelet-derived growth factor receptors (PDGFR), alpha and beta, the fourth Ig domain of macrophage colony stimulating factor (M-CSF), and the Ig domain of the receptor tyrosine kinase KIT. SCFR and the PDGFR alpha and beta have similar organization: an extracellular component having five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. SCFR and its ligand SCF are critical for normal hematopoiesis, mast cell development, melanocytes and gametogenesis. SCF binds to the second and third Ig-like domains of SCFR, this fourth Ig-like domain participates in SCFR dimerization, which follows ligand binding. Deletion of this fourth SCFR_Ig-like domain abolishes

>cd05855 Ig_TrkB_d5 Fifth domain (immunoglobulin-like) of Trk receptor TrkB

Probab=89.08  E-value=2.5  Score=33.14  Aligned_cols=29  Identities=14%  Similarity=0.201  Sum_probs=25.9

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.+..+.+.+.|+|.|.|..|...
T Consensus        43 ~~~L~i~~~~~~D~G~YtC~A~N~~G~~~   71 (79)
T cd05855          43 HGCLQLDNPTHLNNGIYTLVAKNEYGEDE   71 (79)
T ss_pred             EEEEEECCCCcccCEEEEEEEEcCCcccc
Confidence            35799999999999999999999999754

TrkB_d5: the fifth domain of Trk receptor TrkB, this is an immunoglobulin (Ig)-like domain which binds to neurotrophin. The Trk family of receptors are tyrosine kinase receptors, which mediate the trophic effects of the neurotrophin Nerve growth factor (NGF) family. The Trks are activated by dimerization, leading to autophosphorylation of intracellular tyrosine residues, and triggering the signal transduction pathway. TrkB shares significant sequence homology and domain organization with TrkA, and TrkC. The first three domains are leucine-rich domains. The fourth and fifth domains are Ig-like domains playing a part in ligand binding. TrKB is recognized by brain-derived neurotrophic factor (BDNF) and neurotrophin (NT)-4. In some cell systems NT-3 can activate TrkA and TrkB receptors. TrKB transcripts are found throughout multiple structures of the central and peripheral nervous systems.

>cd05738 Ig2_RPTP_IIa_LAR_like Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

Probab=89.02  E-value=1.2  Score=34.44  Aligned_cols=27  Identities=15%  Similarity=0.179  Sum_probs=24.3

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.+++..+.+.|+|.|.|..|..
T Consensus        38 g~L~i~~~~~~D~G~Y~C~a~N~~G~~   64 (74)
T cd05738          38 GALQIENSEESDQGKYECVATNSAGTR   64 (74)
T ss_pred             cEEEECCCChhhCEEEEEEEECCCCce
Confidence            458999999999999999999999863

Ig2_RPTP_IIa_LAR_like: domain similar to the second immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple Ig-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains.

>cd05857 Ig2_FGFR Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor

Probab=88.91  E-value=0.9  Score=36.38  Aligned_cols=27  Identities=11%  Similarity=0.144  Sum_probs=24.4

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++.+.+.+.|+|.|.|..|..
T Consensus        51 ~~l~i~~~~~~D~G~Y~C~a~N~~G~~   77 (85)
T cd05857          51 WSLIMESVVPSDKGNYTCVVENEYGSI   77 (85)
T ss_pred             eEEEEccCCcccCEEEEEEEEeCCCEE
Confidence            468899999999999999999999864

Ig2_FGFR: second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor. FGF receptors bind FGF signaling polypeptides. FGFs participate in multiple processes such as morphogenesis, development, and angiogenesis. FGFs bind to four FGF receptor tyrosine kinases (FGFR1, -2, -3, -4). Receptor diversity is controlled by alternative splicing producing splice variants with different ligand binding characteristics and different expression patterns. FGFRs have an extracellular region comprised of three IG-like domains, a single transmembrane helix, and an intracellular tyrosine kinase domain. Ligand binding and specificity reside in the Ig-like domains 2 and 3, and the linker region that connects these two. FGFR activation and signaling depend on FGF-induced dimerization, a process involving cell surface heparin or heparin sulfate proteoglycans.

>cd05850 Ig1_Contactin-2 First Ig domain of contactin-2

Probab=88.74  E-value=2.1  Score=35.11  Aligned_cols=27  Identities=15%  Similarity=0.170  Sum_probs=22.4

Q ss_pred             ceEEEcCCC-CCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLS-PYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~-p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++. ..+.+.|+|.|.|..|..
T Consensus        58 g~L~I~~~~~~~D~G~Y~C~A~N~~G~~   85 (94)
T cd05850          58 GNLVINNPQKARDAGSYQCLAINRCGTV   85 (94)
T ss_pred             CeEEEccCCccCcCEEEEEEEEcCcCcE
Confidence            467887765 589999999999999964

Ig1_Contactin-2: First Ig domain of the neural cell adhesion molecule contactin-2-like. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. It may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module by contacts between IG domains 1 and 4, and domains 2 and 3. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-2 is also expressed in retinal amacrine cells in the developing c

>cd04969 Ig5_Contactin_like Fifth Ig domain of contactin

Probab=88.74  E-value=0.95  Score=34.95  Aligned_cols=28  Identities=18%  Similarity=0.221  Sum_probs=25.3

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++.+.+.+.|+|.|.|..|...
T Consensus        39 ~~L~i~~v~~~D~G~Y~C~a~N~~G~~~   66 (73)
T cd04969          39 GSLEILNVTKSDEGKYTCFAENFFGKAN   66 (73)
T ss_pred             CeEEEccCChhHCEEEEEEEECCCCceE
Confidence            4699999999999999999999998754

Ig5_Contactin_like: Fifth Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 week

>PF07679 I-set: Immunoglobulin I-set domain; InterPro: IPR013098 The basic structure of immunoglobulin (Ig) molecules is a tetramer of two light chains and two heavy chains linked by disulphide bonds

Probab=88.65  E-value=0.3  Score=39.70  Aligned_cols=30  Identities=17%  Similarity=0.185  Sum_probs=26.5

Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      .....|.|.++...+.+.|+|.|.|..|..
T Consensus        53 ~~~~~L~I~~v~~~D~G~Y~C~~~n~~g~~   82 (90)
T PF07679_consen   53 GGSSSLTIKNVTREDAGTYTCVASNSSGEA   82 (90)
T ss_dssp             TTEEEEEESSESGGGSEEEEEEEEETTEEE
T ss_pred             cceeEEccCCCChhhCEEEEEEEEECCCEE
Confidence            356889999999999999999999997754

There are two types of light chains: kappa and lambda, each composed of a constant domain (CL) and a variable domain (VL). There are five types of heavy chains: alpha, delta, epsilon, gamma and mu, all consisting of a variable domain (VH) and three (in alpha, delta and gamma) or four (in epsilon and mu) constant domains (CH1 to CH4). Ig molecules are highly modular proteins, in which the variable and constant domains have clear, conserved sequence patterns. The domains in Ig and Ig-like molecules are grouped into four types: V-set (variable; IPR013106 from INTERPRO), C1-set (constant-1; IPR003597 from INTERPRO), C2-set (constant-2; IPR008424 from INTERPRO) and I-set (intermediate; IPR013098 from INTERPRO) []. Structural studies have shown that these domains share a common core Greek-key beta-sandwich structure, with the types differing in the number of strands in the beta-sheets as well as in their sequence patterns [, ]. Immunoglobulin-like domains that are related in both sequence and structure can be found in several diverse protein families. Ig-like domains are involved in a variety of functions, including cell-cell recognition, cell-surface receptors, muscle structure and the immune system []. This entry represents I-set domains, which are found in several cell adhesion molecules, including vascular (VCAM), intercellular (ICAM), neural (NCAM) and mucosal addressin (MADCAM) cell adhesion molecules, as well as junction adhesion molecules (JAM). I-set domains are also present in several other diverse protein families, including several tyrosine-protein kinase receptors, the hemolymph protein hemolin, the muscle proteins titin, telokin, and twitchin, the neuronal adhesion molecule axonin-1 [], and the signalling molecule semaphorin 4D that is involved in axonal guidance, immune function and angiogenesis [].; PDB: 3MTR_A 2EDK_A 3DMK_B 1KOA_A 3NCM_A 2NCM_A 2V9Q_A 2CR3_A 3QQN_A 3QR2_A ....

>cd05728 Ig4_Contactin-2-like Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins

Probab=88.51  E-value=0.62  Score=37.36  Aligned_cols=27  Identities=19%  Similarity=0.080  Sum_probs=24.6

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.+++..+.+.|+|.|.|..|..
T Consensus        51 ~~L~i~~~~~~D~G~Y~C~a~N~~G~~   77 (85)
T cd05728          51 GDLRITKLSLSDSGMYQCVAENKHGTI   77 (85)
T ss_pred             CEEEEeeCCHHHCEEEEEEEECCCCeE
Confidence            569999999999999999999999864

Ig4_Contactin-2-like: fourth Ig domain of the neural cell adhesion molecule contactin-2. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-2 (aliases TAG-1, axonin-1) facilitates cell adhesion by homophilic binding between molecules in apposed membranes. The first four Ig domains form the intermolecular binding fragment which arranges as a compact U-shaped module by contacts between Ig domains 1 and 4, and domains 2 and 3. It has been proposed that a linear zipper-like array forms, from contactin-2 molecules alternatively provided by the two apposed membranes.

>cd05858 Ig3_FGFR-2 Third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor 2 (FGFR2)

Probab=88.39  E-value=2.4  Score=34.34  Aligned_cols=30  Identities=23%  Similarity=0.221  Sum_probs=26.7

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPS  282 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s  282 (904)
                      ..+.|.+++..+.+.|+|.|.|..|....+
T Consensus        55 ~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~   84 (90)
T cd05858          55 EVLYLRNVTFEDAGEYTCLAGNSIGISHHS   84 (90)
T ss_pred             eEEEEccCCHHHCEEEEEEEEeCCCcccce
Confidence            579999999999999999999999976443

Ig3_FGFR-2-like; domain similar to the third immunoglobulin (Ig)-like domain of human fibroblast growth factor receptor 2 (FGFR2). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for FGFs. FGFR2 is required for male sex determination.

>cd07689 Ig2_VCAM-1 Second immunoglobulin (Ig)-like domain of vascular endothelial cell adhesion molecule-1 (VCAM-1, CD106) and intercellular cell adhesion molecule-1 (ICAM-1, CD54) and similar proteins

Probab=87.96  E-value=2.2  Score=34.72  Aligned_cols=62  Identities=16%  Similarity=0.263  Sum_probs=36.7

Q ss_pred             ecCCCeEEEEEEcc-CCC--CeEEEeeCCccccCCCCce------eec--ceEEEEe-eecC-CeEEEEEEEecCc
Q psy8771         118 MLDSPLNLSCVAVG-SPM--PFVKWRKGQNIELTPDDKL------PVG--RNVLTLD-RVTE-SENYTCIAASVLG  180 (904)
Q Consensus       118 ~~g~~~~l~C~~~g-~p~--p~i~W~k~~~~~~~~~~~~------~~~--~~~l~i~-~l~d-~g~Y~c~a~n~~g  180 (904)
                      .+|+++++.|.+.| .|.  .+|.|+++ ...+....-.      ...  ...+.+. +.+| +..|.|+|.=..+
T Consensus        13 ~~G~~vtv~C~v~~v~P~~~l~v~LlkG-~~~l~~~~f~~~~~~ks~~~~~~~vtftptreD~g~~fsC~A~L~l~   87 (99)
T cd07689          13 EEGKPVTVKCEVPDVYPFDRLEIELLKG-ETLLPSKSFLEDMDKKSLETKSLEVTFTPTIEDIGKVLVCRAKLHID   87 (99)
T ss_pred             cCCceEEEEEEecCcccCCceEEEEecC-cceecccccccccccCCCCCcceeEEEecchhhCCcEEEEEEEEeec
Confidence            68999999999985 565  57999987 4443321100      001  1122222 2344 4589999975443

Ig2_ VCAM-1_like: domain similar to the second immunoglobulin (Ig)-like domain of vascular endothelial cell adhesion molecule-1 (VCAM-1, CD106). During the inflammation process, these molecules recruit leukocytes onto the vascular endothelium before extravasation to the injured tissues. The interaction of VCAM-1 binding to the beta1 integrin very late antigen (VLA-4) expressed by lymphocytes and monocytes mediates the adhesion of leucocytes to blood vessel walls, and regulates migration across the endothelium. During metastasis, some circulating cancer cells extravasate to a secondary site by a similar process. VCAM-1 may be involved in organ targeted tumor metastasis and may also act as host receptors for viruses and parasites. VCAM-1 contains seven Ig domains.

>cd05764 Ig_2 Subgroup of the immunoglobulin (Ig) superfamily

Probab=87.85  E-value=1  Score=34.86  Aligned_cols=27  Identities=19%  Similarity=0.085  Sum_probs=24.2

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|..+...+.+.|+|.|.|..|..
T Consensus        40 ~~L~i~~~~~~D~G~Y~C~a~N~~G~~   66 (74)
T cd05764          40 GTLDILITTVKDTGSFTCIASNAAGEA   66 (74)
T ss_pred             CEEEEEECChhhCEEEEEEEECCCCeE
Confidence            468899999999999999999999864

Ig_2: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd04974 Ig3_FGFR Third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR)

Probab=87.84  E-value=3.4  Score=33.47  Aligned_cols=31  Identities=26%  Similarity=0.248  Sum_probs=26.9

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSS  283 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~  283 (904)
                      ..+.|.++++.+++.|+|.|.|..|....+.
T Consensus        55 ~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~sa   85 (90)
T cd04974          55 EVLYLRNVSFDDAGEYTCLAGNSIGPSHHSA   85 (90)
T ss_pred             ceEEEeccccccCcEEEEEeecccCcccCCE
Confidence            4689999999999999999999999865443

Ig3_FGFR: third immunoglobulin (Ig)-like domain of fibroblast growth factor receptor (FGFR). Fibroblast growth factors (FGFs) participate in morphogenesis, development, angiogenesis, and wound healing. These FGF-stimulated processes are mediated by four FGFR tyrosine kinases (FGRF1-4). FGFRs are comprised of an extracellular portion consisting of three Ig-like domains, a transmembrane helix, and a cytoplasmic portion having protein tyrosine kinase activity. The highly conserved Ig-like domains 2 and 3, and the linker region between D2 and D3 define a general binding site for FGFs.

>PHA02633 hypothetical protein; Provisional

Probab=87.82  E-value=1.5  Score=31.68  Aligned_cols=36  Identities=14%  Similarity=0.043  Sum_probs=28.4

Q ss_pred             cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         156 GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       156 ~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      ....|.|-+.  +|+|.|.|+.+|..=..+.+..|.|.
T Consensus        16 ~~~nLwilpa~~sDSGiYiC~~rn~t~c~~~si~l~V~   53 (63)
T PHA02633         16 NCNNMLILNPTQSDSGIYMCITKNETYSDMMKFDLCIC   53 (63)
T ss_pred             ccccEEEeccccccCcEEEEEEcCCCeeEEEEEEEEEe
Confidence            4456777776  79999999999877667777777776

>cd05862 Ig1_VEGFR First immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor(R)

Probab=87.80  E-value=2.4  Score=33.99  Aligned_cols=31  Identities=13%  Similarity=0.019  Sum_probs=26.3

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS  282 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s  282 (904)
                      ...+.|.+++..+.+.|+|.|.|..|....+
T Consensus        49 ~s~L~I~~~~~~DsG~Y~C~a~n~~~~~~~~   79 (86)
T cd05862          49 SSTLTIENVTLSDLGRYTCTASSGQMIAKNS   79 (86)
T ss_pred             eeEEEEecCCcccCEEEEEEEeecceEeccc
Confidence            4689999999999999999999987765433

IG1_VEGFR: first immunoglobulin (Ig)-like domain of vascular endothelial growth factor (VEGF) receptor(R). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGF_A interacts with both VEGFR-1 and VEGFR-2. VEGFR-1 binds strongest to VEGF, VEGF-2 binds more weakly. VEGFR-3 appears not to bind VEGF, but binds other members of the VEGF family (VEGF-C and -D). VEGFRs bind VEGFs with high affinity with the IG-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-2 is a major mediator of the mitogenic, angioge

>KOG4597|consensus

Probab=87.77  E-value=0.87  Score=47.45  Aligned_cols=85  Identities=13%  Similarity=0.093  Sum_probs=61.7

Q ss_pred             eEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEee---CCccccCCCCcee-----ecceEEEEeee--cCCeEEEEEE
Q psy8771         106 QFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK---GQNIELTPDDKLP-----VGRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       106 ~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k---~~~~~~~~~~~~~-----~~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      .+..-|.. ..+..++...+.|-+.|.|.+.|+|.+   ++...+.....+.     .....|.|-+-  .|+|.|+|.+
T Consensus       198 ~l~~cpa~-w~vg~wetcS~tCg~~G~q~r~V~c~qv~anr~~vv~~~nq~~e~p~vtstcql~ic~ewq~~a~w~tCs~  276 (560)
T KOG4597|consen  198 ALVDCPAE-WFVGDWETCSSTCGVQGRQYRVVTCEQVFANRENVVMRPNQTVENPVVTSTCQLVICNEWQADAGWYTCSA  276 (560)
T ss_pred             ccccCcch-hhcccchhhcccccccCCcCceeeeehhhccccceeecCccccCCcceeeeeeEEEcchhhcCCCceeecc
Confidence            44444555 788899999999999999999999998   3122221111111     13457888776  6999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                      .+..|.......+.+.
T Consensus       277 rcg~g~~~rdv~c~s~  292 (560)
T KOG4597|consen  277 RCGAGFLRRDVPCSSV  292 (560)
T ss_pred             ccccceeeccceeeee
Confidence            9999998887777665

>cd05864 Ig2_VEGFR-2 Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 2 (VEGFR-2)

Probab=87.71  E-value=1.4  Score=33.57  Aligned_cols=28  Identities=7%  Similarity=0.172  Sum_probs=25.3

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++.+.+.+.|+|.|.|..|...
T Consensus        34 ~~L~I~~v~~~D~G~YtC~a~N~~G~~~   61 (70)
T cd05864          34 VHLTIYEVTEKDAGNYTVVLTNPITKEE   61 (70)
T ss_pred             CEEEECcCCHHHCEEEEEEEEECCCcee
Confidence            4699999999999999999999998654

Ig2_VEGF-2: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor 2 (VEGFR-2). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGFR-2 (KDR/Flk-1) is a major mediator of the mitogenic, angiogenic and microvascular permeability-enhancing effects of VEGF-A; VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGF-A also interacts with VEGFR-1, which it binds more strongly than VEGFR-2. VEGFR-2 and -1 may mediate a chemotactic and a survival signal in hematopoietic stem cells or leukemia cells.

>cd05848 Ig1_Contactin-5 First Ig domain of contactin-5

Probab=87.61  E-value=2.7  Score=34.47  Aligned_cols=27  Identities=19%  Similarity=0.164  Sum_probs=23.0

Q ss_pred             ceEEEcCCC-CCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLS-PYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~-p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++. +.+.+.|+|.|.|..|..
T Consensus        58 g~L~i~~~~~~~D~G~Y~C~A~N~~G~~   85 (94)
T cd05848          58 GNLIISNPSEVKDSGRYQCLATNSIGSI   85 (94)
T ss_pred             CeEEEccCCccCcCEEEEEEEEcCCCeE
Confidence            467888874 689999999999999964

Ig1_Contactin-5: First Ig domain of the neural cell adhesion molecule contactin-5. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains, anchored to the membrane by glycosylphosphatidylinositol. The different contactins show different expression patterns in the central nervous system. In rats, a lack of contactin-5 (NB-2) results in an impairment of the neuronal activity in the auditory system. Contactin-5 is expressed specifically in the postnatal nervous system, peaking at about 3 weeks postnatal. Contactin-5 is highly expressed in the adult human brain in the occipital lobe and in the amygdala; lower levels of expression have been detected in the corpus callosum, caudate nucleus, and spinal cord.

>cd05856 Ig2_FGFRL1-like Second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor_like-1(FGFRL1)

Probab=87.58  E-value=1.4  Score=34.86  Aligned_cols=28  Identities=18%  Similarity=0.184  Sum_probs=24.9

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.|.++++.+.+.|.|.|.|..|..
T Consensus        47 ~~~L~i~~v~~~D~G~Y~C~a~N~~G~~   74 (82)
T cd05856          47 KWTLSLKNLKPEDSGKYTCHVSNRAGEI   74 (82)
T ss_pred             eEEEEEccCChhhCEEEEEEEEcCCccE
Confidence            3579999999999999999999998853

Ig2_FGFRL1-like: second immunoglobulin (Ig)-like domain of fibroblast growth factor (FGF) receptor_like-1(FGFRL1). FGFRL1 is comprised of a signal peptide, three extracellular Ig-like modules, a transmembrane segment, and a short intracellular domain. FGFRL1 is expressed preferentially in skeletal tissues. Similar to FGF receptors, the expressed protein interacts specifically with heparin and with FGF2. FGFRL1 does not have a protein tyrosine kinase domain at its C terminus; neither does its cytoplasmic domain appear to interact with a signaling partner. It has been suggested that FGFRL1 may not have any direct signaling function, but instead acts as a decoy receptor trapping FGFs and preventing them from binding other receptors.

>cd05733 Ig6_L1-CAM_like Sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins

Probab=87.26  E-value=2.1  Score=33.43  Aligned_cols=28  Identities=25%  Similarity=0.291  Sum_probs=22.5

Q ss_pred             eceEEEcCCCC----CCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSP----YTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p----~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.|..+.+    .+.+.|+|.|.|..|..
T Consensus        38 ~g~L~i~~~~~~~~~~d~G~Y~C~A~N~~G~~   69 (77)
T cd05733          38 SGTLVIDNMNGGRAEDYEGEYQCYASNELGTA   69 (77)
T ss_pred             CCEEEEeccCCCCCcCCCEEEEEEEEcCCCcE
Confidence            35678888754    57899999999999964

Ig6_L1-CAM_like: domain similar to the sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM). L1 belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region and an intracellular domain. L1 is primarily expressed in the nervous system and is involved in its development and function. L1 is associated with an X-linked recessive disorder, X-linked hydrocephalus, MASA syndrome, or spastic paraplegia type 1, that involves abnormalities of axonal growth. This group also contains NrCAM [Ng(neuronglia)CAM-related cell adhesion molecule], which is primarily expressed in the nervous system, and human neurofascin.

>PF08204 V-set_CD47: CD47 immunoglobulin-like domain; InterPro: IPR013270 This family represents the CD47 leukocyte antigen V-set like Ig domain [, ]

Probab=87.13  E-value=0.71  Score=39.73  Aligned_cols=73  Identities=21%  Similarity=0.308  Sum_probs=43.7

Q ss_pred             cCCCeEEEEEEcc-----CCCCeEEEeeCCccccCC-C--Cce-------------eecceEEEEeee-cCCeEEEEEEE
Q psy8771         119 LDSPLNLSCVAVG-----SPMPFVKWRKGQNIELTP-D--DKL-------------PVGRNVLTLDRV-TESENYTCIAA  176 (904)
Q Consensus       119 ~g~~~~l~C~~~g-----~p~p~i~W~k~~~~~~~~-~--~~~-------------~~~~~~l~i~~l-~d~g~Y~c~a~  176 (904)
                      =.+++.|.|.+..     .+...|.|..++...+.. +  .+.             .-++.+|.+... .-.|.|+|.+.
T Consensus        26 CN~tV~IPC~v~n~~~~ni~~m~VkWk~~~~~If~~dg~~~~~~~~~f~sa~i~~l~kG~aSL~~~~~~a~~GnYTCeVt  105 (130)
T PF08204_consen   26 CNDTVVIPCFVNNLEANNISEMYVKWKFKNKDIFIFDGTNNKSTSDNFPSAKISELLKGNASLKMDKSDAVEGNYTCEVT  105 (130)
T ss_dssp             T-SEEEE--BBSS---SSGGGEEEEEEETTEEEEEEETTTTEEEEGGGTT-BEGGGGGTB--EEEEHHHHH-EEEEEEEE
T ss_pred             cCCCEEEEeEeccccccccceEEEEEEECCeEEEEEcCccceecccCccccchhHhhCCCEEEEEcchhccccceEEEEE
Confidence            3478899999975     233468999973322211 1  111             113446888776 24799999999


Q ss_pred             ecCcceEEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKVQ  191 (904)
Q Consensus       177 n~~g~~~~~~~l~v~  191 (904)
                      ....+.+....|...
T Consensus       106 ~~~~ege~~i~Lk~~  120 (130)
T PF08204_consen  106 ELSREGETTIELKYR  120 (130)
T ss_dssp             ETTEEEEEEEEEEE-
T ss_pred             ecCCCceEEEEEEEE
Confidence            988888888888764

; PDB: 2VSC_B 2JJS_D 2JJT_C.

>cd05861 Ig1_PDGFR-alphabeta Frst immunoglobulin (Ig)-like domain of platelet-derived growth factor (PDGF) receptors (R), alpha (CD140a), and beta (CD140b)

Probab=86.93  E-value=4.9  Score=32.02  Aligned_cols=26  Identities=8%  Similarity=-0.066  Sum_probs=23.5

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      ...|.|.++++.+.+.|.|.|.|..+
T Consensus        45 ~s~L~I~~~~~~DsG~Y~C~a~n~~~   70 (84)
T cd05861          45 RSTLTFPHATVEDSGTYECAAHESTQ   70 (84)
T ss_pred             EEEEEECCCCcCCCEEEEEEEEECcc
Confidence            46799999999999999999998765

Ig1_PDGFR-alphabeta: The first immunoglobulin (Ig)-like domain of platelet-derived growth factor (PDGF) receptors (R), alpha (CD140a), and beta (CD140b). PDGF is a potent mitogen for connective tissue cells. PDGF-stimulated processes are mediated by three different PDGFs (PDGF-A,-B, and C). PDGFRalpha binds to all three PDGFs, whereas the PDGFRbeta binds only to PDGF-B. PDGFRs alpha and beta have similar organization: an extracellular component with five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. In mice, PDGFRalpha and PDGFRbeta are essential for normal development.

>KOG1948|consensus

Probab=86.82  E-value=43  Score=38.61  Aligned_cols=49  Identities=14%  Similarity=0.226  Sum_probs=31.4

Q ss_pred             CCceeeEEEEEEeCCccccc-eEEecccceEEEeCCCCCcEEEEEEEEEc
Q psy8771         648 GENIISYELYWNDTYAKAKH-HRRIGLVETYSLTGLYPNTLYYIWLAAQS  696 (904)
Q Consensus       648 ~~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~  696 (904)
                      +.+..+-.|+-...+..... .......-.|+|.||.|++.|.|+|.+.-
T Consensus       918 Gdp~~gVaieA~sdn~~~y~eeattdenG~yRiRGL~Pdc~Y~V~vk~~~  967 (1165)
T KOG1948|consen  918 GDPMKGVAIEALSDNCDLYQEEATTDENGTYRIRGLLPDCEYQVHVKSYA  967 (1165)
T ss_pred             CCcccCeEEEEecCCCCccccccccccCCcEEEeccCCCceEEEEEeecc
Confidence            34445555554444432222 22233345899999999999999999984

>cd05859 Ig4_PDGFR-alpha Fourth immunoglobulin (Ig)-like domain of platelet-derived growth factor receptor (PDGFR) alpha

Probab=86.78  E-value=1.1  Score=37.23  Aligned_cols=28  Identities=7%  Similarity=-0.082  Sum_probs=25.3

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..|.|.++++.+.+.|+|.|.|..|...
T Consensus        65 s~L~I~~v~~~D~G~Ytc~A~N~~g~~~   92 (101)
T cd05859          65 SKLKLIRAKEEDSGLYTALAQNEDAVKS   92 (101)
T ss_pred             cEEEEeeCCHHHCEEEEEEEEcCCceEE
Confidence            6799999999999999999999988643

IG4_PDGFR-alpha: The fourth immunoglobulin (Ig)-like domain of platelet-derived growth factor receptor (PDGFR) alpha. PDGF is a potent mitogen for connective tissue cells. PDGF-stimulated processes are mediated by three different PDGFs (PDGF-A,-B, and C). PDGFR alpha binds to all three PDGFs, whereas the PDGFR beta (not included in this group) binds only to PDGF-B. PDGF alpha is organized as an extracellular component having five Ig-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. In mice, PDGFR alpha and PDGFR beta are essential for normal development.

>cd05751 Ig1_LILRB1_like First immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILR)B1 (also known as LIR-1) and similar proteins

Probab=86.64  E-value=4.8  Score=32.68  Aligned_cols=72  Identities=10%  Similarity=0.050  Sum_probs=44.5

Q ss_pred             cCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE-eecceeceEEEcCCCCCCeEEEEEEEEcC-CCCCCCCCCeEE
Q psy8771         213 TATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE-ISGIITTYYTVRNLSPYTEYEFYIIAVNN-LGRGPPSSPAVI  287 (904)
Q Consensus       213 ~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~-~g~s~~s~~~~~  287 (904)
                      ....++|.+..+ .+...|.+...  +....... ........+.|..+.+.+.+.|+|++.+. .+.+..|.++.+
T Consensus        15 ~G~~VtL~C~~~-~~~~~f~l~k~--g~~~~~~~~~~~~~~~~f~i~~v~~~~~G~Y~C~~~~~~~~~S~~Sd~lel   88 (91)
T cd05751          15 LGKPVTLRCQGP-YGAVEYRLYRE--GSTFAVKKPPEPQNKAKFFIPSMKREHAGRYRCYYRSGVALWSEPSDPLEL   88 (91)
T ss_pred             CCCcEEEEEecC-CCCCEEEEEEC--CCCccccccCCCceeEEEEccCCChhHCEEEEEEEECCCCccCCCCCcEEE
Confidence            346778888765 23444544322  11111111 12344567999999999999999999987 445556665554

Ig1_LILRB1_like: domain similar to the first immunoglobulin (Ig)-like domain found in Leukocyte Ig-like receptors (LILR)B1 (also known as LIR-1). This group includes, LILRA5 (LIR9), an activating natural cytotoxicity receptor NKp46, and the immune-type receptor glycoprotein VI (GPVI). LILRs are a family of immunoreceptors expressed on expressed on T and B cells, on monocytes, dendritic cells, and subgroups of natural killer (NK) cells. The human LILR family contains nine proteins (LILRA1-3,and 5, and LILRB1-5). From functional assays, and as the cytoplasmic domains of various LILRs, for example LILRB1 (LIR-1), LILRB2 (LIR-2), and LILRB3 (LIR-3) contain immunoreceptor tyrosine-based inhibitory motifs (ITIMs) it is thought that LIR proteins are inhibitory receptors. Of the eight LIR family proteins, only LIR-1(LILRB1), and LIR-2 (LILRB2),

>cd04977 Ig1_NCAM-1_like First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1 and similar proteins

Probab=86.53  E-value=2.6  Score=34.38  Aligned_cols=28  Identities=14%  Similarity=0.138  Sum_probs=24.8

Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      ....++|.++++.+.+.|+|.|.|..|.
T Consensus        55 ~~~~L~I~~v~~~D~G~Y~C~A~N~~g~   82 (92)
T cd04977          55 VRSTLTIYNANIEDAGIYKCVATDAKGT   82 (92)
T ss_pred             CEEEEEEecCCcccCEEEEEEEEcCCCC
Confidence            3468999999999999999999998764

Ig1_NCAM-1 like: first immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1. NCAM-1 plays important roles in the development and regeneration of the central nervous system, in synaptogenesis and neural migration. NCAM mediates cell-cell and cell-substratum recognition and adhesion via homophilic (NCAM-NCAM), and heterophilic (NCAM-nonNCAM), interactions. NCAM is expressed as three major isoforms having different intracellular extensions. The extracellular portion of NCAM has five N-terminal Ig-like domains and two fibronectin type III domains. The double zipper adhesion complex model for NCAM homophilic binding involves the Ig1, Ig2, and Ig3 domains. By this model, Ig1 and Ig2 mediate dimerization of NCAM molecules situated on the same cell surface (cis interactions), and Ig3 domains mediate interactions between NCAM molecules expressed on the s

>cd05765 Ig_3 Subgroup of the immunoglobulin (Ig) superfamily

Probab=86.44  E-value=2.1  Score=33.73  Aligned_cols=29  Identities=17%  Similarity=0.015  Sum_probs=25.8

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.++++.+.+.|.|.|.|..|...
T Consensus        46 ~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   74 (81)
T cd05765          46 IGQLVIYNAQPQDAGLYTCTARNSGGLLR   74 (81)
T ss_pred             ccEEEEccCCcccCEEEEEEEecCCceEE
Confidence            36799999999999999999999998643

Ig_3: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.

>cd04976 Ig2_VEGFR Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor (VEGFR)

Probab=86.23  E-value=0.77  Score=35.25  Aligned_cols=27  Identities=7%  Similarity=0.191  Sum_probs=24.6

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++++.+.+.|+|.|.|..|..
T Consensus        35 ~~L~I~~v~~~D~G~YtC~a~N~~g~~   61 (71)
T cd04976          35 HSLTIKDVTEEDAGNYTVVLTNKQAKL   61 (71)
T ss_pred             CEEEECcCCHHHCEEEEEEEEcCCccE
Confidence            679999999999999999999998853

Ig2_VEGFR: Second immunoglobulin (Ig)-like domain of vascular endothelial growth factor receptor (VEGFR). The VEGFRs have an extracellular component with seven Ig-like domains, a transmembrane segment, and an intracellular tyrosine kinase domain interrupted by a kinase-insert domain. The VEGFR family consists of three members, VEGFR-1 (Flt-1), VEGFR-2 (KDR/Flk-1) and VEGFR-3 (Flt-4). VEGFRs bind VEGFs with high affinity at the Ig-like domains. VEGF-A is important to the growth and maintenance of vascular endothelial cells and to the development of new blood- and lymphatic-vessels in physiological and pathological states. VEGFR-2 is a major mediator of the mitogenic, angiogenic and microvascular permeability-enhancing effects of VEGF-A. VEGFR-1 may play an inhibitory part in these processes by binding VEGF and interfering with its interaction with VEGFR-2. VEGFR-1 has a signa

>cd05724 Ig2_Robo Second immunoglobulin (Ig)-like domain in Robo (roundabout) receptors

Probab=86.17  E-value=4.6  Score=32.20  Aligned_cols=29  Identities=14%  Similarity=0.134  Sum_probs=25.5

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.++++.+.+.|+|.|.|..|...
T Consensus        50 ~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   78 (86)
T cd05724          50 DGNLLIAEARKSDEGTYKCVATNMVGERE   78 (86)
T ss_pred             CCEEEEeECCcccCEEEEEEEEeccCcee
Confidence            35799999999999999999999988643

Ig2_Robo: domain similar to the second immunoglobulin (Ig)-like domain in Robo (roundabout) receptors. Robo receptors play a role in the development of the central nervous system (CNS), and are receptors of Slit protein. Slit is a repellant secreted by the neural cells in the midline. Slit acts through Robo to prevent most neurons from crossing the midline from either side. Three mammalian Robo homologs (robo1, -2, and -3), and three mammalian Slit homologs (Slit-1,-2, -3), have been identified. Commissural axons, which cross the midline, express low levels of Robo; longitudinal axons, which avoid the midline, express high levels of Robo. robo1, -2, and -3 are expressed by commissural neurons in the vertebrate spinal cord and Slits 1, -2, -3 are expressed at the ventral midline. Robo-3 is a divergent member of the Robo family which instead of being a positive regulator of slit responsiveness, antago

>cd05754 Ig3_Perlecan_like Third immunoglobulin (Ig)-like domain found in Perlecan and similar proteins

Probab=86.11  E-value=2.2  Score=34.11  Aligned_cols=64  Identities=14%  Similarity=0.117  Sum_probs=38.5

Q ss_pred             CCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         214 ATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       214 ~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...++|.+...... ....+.|...+...... . ......+.|.++++.+.+.|.|.|.|..|...
T Consensus        16 G~~v~L~C~~~~~~-~~~~i~W~~~~~~~~~~-~-~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~   79 (85)
T cd05754          16 GADVSFICRAKSKS-PAYTLVWTRVGGGLPSR-A-MDFNGILTIRNVQLSDAGTYVCTGSNMLDTDE   79 (85)
T ss_pred             CCCEEEEEEcCCCC-CCcEEEEEECCCcCCCc-c-cccCCEEEECCCCHHHCEEEEEEEeccCCeEe
Confidence            34466666543211 12345555443221111 1 11236799999999999999999999988643

Ig3_Perlecan_like: domain similar to the third immunoglobulin (Ig)-like domain found in Perlecan. Perlecan is a large multi-domain heparin sulfate proteoglycan, important in tissue development and organogenesis. Perlecan can be represented as 5 major portions; its fourth major portion (domain IV) is a tandem repeat of immunoglobulin-like domains (Ig2-Ig15), which can vary in size due to alternative splicing. Perlecan binds many cellular and extracellular ligands. Its domain IV region has many binding sites. Some of these have been mapped at the level of individual Ig-like domains, including a site restricted to the Ig5 domain for heparin/sulfatide, a site restricted to the Ig3 domain for nidogen-1 and nidogen-2, a site restricted to Ig4-5 for fibronectin, and sites restricted to Ig2 and to Ig13-15 for fibulin-2.

>cd05849 Ig1_Contactin-1 First Ig domain of contactin-1

Probab=85.25  E-value=4.1  Score=33.24  Aligned_cols=27  Identities=15%  Similarity=0.090  Sum_probs=23.3

Q ss_pred             ceEEEcCCC-CCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLS-PYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~-p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..|.|.++. ..+.+.|+|.|.|..|..
T Consensus        57 g~L~I~~~~~~~D~G~Y~C~A~N~~G~~   84 (93)
T cd05849          57 GNLVINNPDKYKDAGRYVCIVSNIYGKV   84 (93)
T ss_pred             CEEEECcCCcCCCCEEEEEEEEeCcceE
Confidence            568898885 689999999999999864

Ig1_Contactin-1: First Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may, through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.

>PLN02533 probable purple acid phosphatase

Probab=84.97  E-value=6.3  Score=42.98  Aligned_cols=81  Identities=16%  Similarity=0.263  Sum_probs=48.5

Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE------E-------ecccceEEEeCCCCCcEE
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR------R-------IGLVETYSLTGLYPNTLY  688 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~------~-------~~~~~~~~l~~L~p~t~Y  688 (904)
                      ..|..++++-.+.+.+.|+|.......     -.|+|....+......      .       .+....+.|.+|+|+|.|
T Consensus        42 ~~P~qvhls~~~~~~m~V~W~T~~~~~-----~~V~yG~~~~~l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y  116 (427)
T PLN02533         42 THPDQVHISLVGPDKMRISWITQDSIP-----PSVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVY  116 (427)
T ss_pred             CCCceEEEEEcCCCeEEEEEECCCCCC-----CEEEEecCCCCCcceEEEEEEEEeccccccCCeEEEEEeCCCCCCCEE
Confidence            356666666666778999997754321     2355655432211100      0       011245789999999999


Q ss_pred             EEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771         689 YIWLAAQSPRGEGATTPPIPVRTKQ  713 (904)
Q Consensus       689 ~v~V~a~~~~G~~~~s~~~~~~t~~  713 (904)
                      .++|-      ....+....|+|.+
T Consensus       117 ~Yrvg------~~~~s~~~~F~T~p  135 (427)
T PLN02533        117 YYKCG------GPSSTQEFSFRTPP  135 (427)
T ss_pred             EEEEC------CCCCccceEEECCC
Confidence            99983      11235567788864

>TIGR00868 hCaCC calcium-activated chloride channel protein 1

Probab=84.58  E-value=96  Score=36.97  Aligned_cols=84  Identities=13%  Similarity=0.228  Sum_probs=52.8

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEE--------Eee---cCceEEEE--c
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWET--------QVV---DNNQLTTI--S  544 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~--------~~~---~~~~~~~~--~  544 (904)
                      .||....+|++.. ....|.|+|+.|-+  ..|....|.|++...-......+..        ..+   +....+.+  .
T Consensus       754 ~PP~rItDL~~~~-~~~~v~LsWTAPG~d~D~G~a~~y~ir~s~~~~~l~~~f~~a~~vn~~~~~P~~ags~e~~~f~~~  832 (863)
T TIGR00868       754 FPPSKITDLEAGF-QGDNIILTWTAPGDVLDHGRADRYIIRISTSILDLRDDFNDATQVNTTDLIPKEANSKEVFVFKPE  832 (863)
T ss_pred             CCCccceeeEEee-cCCEEEEEeeCCCccCCCCccceEEEEecCCHHHHHhhhccccccccCCcCCCCCCceeEEEEeCC
Confidence            4678888998854 44569999999865  5678899999998643111001100        001   22233333  3


Q ss_pred             C--CCCCCeEEEEEEEEeCCCC
Q psy8771         545 D--LTPHTIYTIRVQAFTSVGP  564 (904)
Q Consensus       545 ~--L~p~t~Y~~~V~a~~~~g~  564 (904)
                      .  .+.++.|.|-|+|++..|.
T Consensus       833 ~~~~~~~~~~~~ai~a~d~~~~  854 (863)
T TIGR00868       833 GIPIENGTDLFIAVQAIDKANL  854 (863)
T ss_pred             cccccCCeEEEEEEEEEccccc
Confidence            3  2257789999999998764

distributions. found a row in 1A13.INFO that was not parsed out

>PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators

Probab=84.47  E-value=5  Score=30.09  Aligned_cols=35  Identities=26%  Similarity=0.220  Sum_probs=24.4

Q ss_pred             EEEecCcc-eEEecCCCCCceEEEEEEEeeCCCCCCC
Q psy8771         768 IVTLKNQT-SFVLDELKKWTEYRIWVLAGTSIGDGPS  803 (904)
Q Consensus       768 ~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~g~g~~  803 (904)
                      +....... .+.+.+|.|| .|.|.|+|.+..|....
T Consensus        21 W~~~~~~~~~~~~~~L~~G-~Y~l~V~a~~~~~~~~~   56 (66)
T PF07495_consen   21 WITLGSYSNSISYTNLPPG-KYTLEVRAKDNNGKWSS   56 (66)
T ss_dssp             EEEESSTS-EEEEES--SE-EEEEEEEEEETTS-B-S
T ss_pred             EEECCCCcEEEEEEeCCCE-EEEEEEEEECCCCCcCc
Confidence            45555444 9999999997 99999999998876443

However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.

>PF09240 IL6Ra-bind: Interleukin-6 receptor alpha chain, binding; InterPro: IPR015321 Members of this entry adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology

Probab=84.21  E-value=7.5  Score=32.16  Aligned_cols=76  Identities=9%  Similarity=0.026  Sum_probs=51.5

Q ss_pred             CCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCeEE-----eecceeceEEEcCCCCC----CeEEEEEE
Q psy8771         203 APLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPYSE-----ISGIITTYYTVRNLSPY----TEYEFYII  271 (904)
Q Consensus       203 ~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~~~-----~~~~~~~~~~i~~L~p~----~~Y~~~v~  271 (904)
                      +|.||++.-.+...+.|+|.+.  ..+-..|.+.++..... ....     ...+....+.+......    ..|.+.|.
T Consensus         1 ~~~nlsC~~~~~~~m~CtW~~g~~~~~~t~y~L~~~~~~~~-~~~eC~~y~~~~~~~~gC~~~~~~~~~~~~~~~~v~V~   79 (99)
T PF09240_consen    1 KPQNLSCFIYNLEYMNCTWEPGKEAPPDTQYTLYYWYSPLE-EEKECPHYSKDSGTRIGCQFPVSEIDSSEFSQYNVCVN   79 (99)
T ss_dssp             S-EEEEEEEETTTEEEEEEECCTTCSTTEEEEEEEEETTSS-SEEEESEEEESTSSEEEEEEESCTT-TTTTSEEEEEEE
T ss_pred             CCeeCEEEEECCEEEEEEECCCCCCCCcccEEEEEEcCCCC-ccccCCCccccCCceeEEEecCCCccccccceEEEEEE
Confidence            4678999888899999999986  44557899999876422 2221     11123456777776663    37899999


Q ss_pred             EEcCCCCC
Q psy8771         272 AVNNLGRG  279 (904)
Q Consensus       272 a~n~~g~s  279 (904)
                      +.+..|..
T Consensus        80 ~ss~~~~i   87 (99)
T PF09240_consen   80 GSSSAGSI   87 (99)
T ss_dssp             EEETTEEE
T ss_pred             eccCCCcc
Confidence            88887653

They are required for binding to the cytokine Interleukin-6 []. ; PDB: 1N26_A 1P9M_C 3LB6_C 1PVH_A 3L5H_A 1BQU_A 1I1R_A 3QT2_B 3BPN_C 3BPO_C ....

>PF09240 IL6Ra-bind: Interleukin-6 receptor alpha chain, binding; InterPro: IPR015321 Members of this entry adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology

Probab=83.97  E-value=12  Score=31.05  Aligned_cols=79  Identities=15%  Similarity=0.167  Sum_probs=53.6

Q ss_pred             CCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecC--ceEEEEcCCCCC----CeEEEEEEE
Q psy8771         485 PRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDN--NQLTTISDLTPH----TIYTIRVQA  558 (904)
Q Consensus       485 p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~p~----t~Y~~~V~a  558 (904)
                      |.+|...-.+...|..+|.+.... .....|.++|+.........+.......  ...+.+......    ..|.|.|.+
T Consensus         2 ~~nlsC~~~~~~~m~CtW~~g~~~-~~~t~y~L~~~~~~~~~~~eC~~y~~~~~~~~gC~~~~~~~~~~~~~~~~v~V~~   80 (99)
T PF09240_consen    2 PQNLSCFIYNLEYMNCTWEPGKEA-PPDTQYTLYYWYSPLEEEKECPHYSKDSGTRIGCQFPVSEIDSSEFSQYNVCVNG   80 (99)
T ss_dssp             -EEEEEEEETTTEEEEEEECCTTC-STTEEEEEEEEETTSSSEEEESEEEESTSSEEEEEEESCTT-TTTTSEEEEEEEE
T ss_pred             CeeCEEEEECCEEEEEEECCCCCC-CCcccEEEEEEcCCCCccccCCCccccCCceeEEEecCCCccccccceEEEEEEe
Confidence            568888888889999999984432 2347899999987644333333333333  456777776662    479999999


Q ss_pred             EeCCCC
Q psy8771         559 FTSVGP  564 (904)
Q Consensus       559 ~~~~g~  564 (904)
                      .+..|.
T Consensus        81 ss~~~~   86 (99)
T PF09240_consen   81 SSSAGS   86 (99)
T ss_dssp             EETTEE
T ss_pred             ccCCCc
Confidence            887764

They are required for binding to the cytokine Interleukin-6 []. ; PDB: 1N26_A 1P9M_C 3LB6_C 1PVH_A 3L5H_A 1BQU_A 1I1R_A 3QT2_B 3BPN_C 3BPO_C ....

>KOG1225|consensus

Probab=83.60  E-value=3  Score=45.64  Aligned_cols=154  Identities=14%  Similarity=0.105  Sum_probs=98.2

Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcc--ccceEEecccceEEEeCCCCCcEEEEEEEEEcCC-
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK--AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR-  698 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~-  698 (904)
                      .+|..+....-+...+.+.|..    ......|...|......  ............+.+..|+|+..|.++++++-.. 
T Consensus       367 ~~~~~~~~~~cs~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~  442 (525)
T KOG1225|consen  367 ADPSLLLITECSPPSLCIAGVG----RRRVTHCAGTYCPLGESGGDLQGRVPGDANSVDIQGLEPGDEYNCSVNTVAANI  442 (525)
T ss_pred             CCchhhcccccCCCceeecccc----ccccccccccccccccCCCccceeeccceeeeeeeeecCCcceeeehhhhhhhh
Confidence            3555666666777888888882    22344454444442211  1134455566789999999999999999998653 


Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceE
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSF  777 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~  777 (904)
                      |.....  ....+...    -+..+.+.....+++.+.|..|...     ..++.+.+.....+..  ....+. ..+.+
T Consensus       443 ~~~~~~--~~~~~~~~----~~g~~~v~~~~~~s~e~~g~~~s~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  509 (525)
T KOG1225|consen  443 GSLPKD--KSETTVLC----WNGGLCVDGETESSLEVGGPCPSSG-----TCGWEVRCGPCGNDGG--VNAEPPPECTSY  509 (525)
T ss_pred             ccCCcc--cccceEee----cCCceeeeeeeeccccccCCCCCcc-----ccceEEEeeecCcccc--cccCCCCCCCCC
Confidence            222222  22233322    2567889999999999999999632     5677887732221111  111122 77888


Q ss_pred             EecCCCCCceEEEEE
Q psy8771         778 VLDELKKWTEYRIWV  792 (904)
Q Consensus       778 ~i~~L~p~t~Y~~~V  792 (904)
                      ...+|.+++.|.+.+
T Consensus       510 ~~~~l~~c~~~~~~~  524 (525)
T KOG1225|consen  510 DRTGLGPCTEYEVSV  524 (525)
T ss_pred             CccCcccccceeccc
Confidence            899999999998865

>cd05739 Ig3_RPTP_IIa_LAR_like Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR

Probab=83.55  E-value=4.1  Score=30.96  Aligned_cols=25  Identities=16%  Similarity=0.286  Sum_probs=20.3

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++.  +.+.|+|.|.|..|..
T Consensus        38 ~~L~i~~~~--d~G~Y~C~A~N~~G~~   62 (69)
T cd05739          38 NVLELTNIY--ESANYTCVAISSLGMI   62 (69)
T ss_pred             cEEEEeccc--cCeeEEEEEEeCCCEE
Confidence            457888875  5789999999999863

Ig3_RPTP_IIa_LAR_like: domain similar to the third immunoglobulin (Ig)-like domain found in the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR. LAR belongs to the RPTP type IIa subfamily. Members of this subfamily are cell adhesion molecule-like proteins involved in central nervous system (CNS) development. They have large extracellular portions, comprised of multiple IG-like domains and two to nine fibronectin type III (FNIII) domains, and a cytoplasmic portion having two tandem phosphatase domains. Included in this group is Drosophila LAR (DLAR).

>cd05734 Ig7_DSCAM Seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)

Probab=83.47  E-value=3.8  Score=32.13  Aligned_cols=27  Identities=7%  Similarity=0.096  Sum_probs=25.0

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      .++.|.++++.+.+.|+|.|.|..|..
T Consensus        44 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~   70 (79)
T cd05734          44 GSLLIKHVLEEDSGYYLCKVSNDVGAD   70 (79)
T ss_pred             CeEEECcCCcccCEEEEEEEEeCCCCC
Confidence            679999999999999999999999865

Ig7_DSCAM: the seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM). DSCAM is a cell adhesion molecule expressed largely in the developing nervous system. The gene encoding DSCAM is located at human chromosome 21q22, the locus associated with the mental retardation phenotype of Down Syndrome. DSCAM is predicted to be the largest member of the IG superfamily. It has been demonstrated that DSCAM can mediate cation-independent homophilic intercellular adhesion.

>PLN02533 probable purple acid phosphatase

Probab=82.86  E-value=10  Score=41.41  Aligned_cols=84  Identities=17%  Similarity=0.187  Sum_probs=51.7

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccE---EEEe-------c-CcceEEecCCCCCc
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEAS---IVTL-------K-NQTSFVLDELKKWT  786 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~---~~~~-------~-~~~~~~i~~L~p~t  786 (904)
                      ..|..+++.-.+.+++.|+|....  .. .+    .|+|....+......   ....       + ....+.|.+|+|++
T Consensus        42 ~~P~qvhls~~~~~~m~V~W~T~~--~~-~~----~V~yG~~~~~l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p~T  114 (427)
T PLN02533         42 THPDQVHISLVGPDKMRISWITQD--SI-PP----SVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNT  114 (427)
T ss_pred             CCCceEEEEEcCCCeEEEEEECCC--CC-CC----EEEEecCCCCCcceEEEEEEEEeccccccCCeEEEEEeCCCCCCC
Confidence            357888888778999999999873  21 22    244543322111000   0000       1 23567899999999


Q ss_pred             eEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         787 EYRIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       787 ~Y~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      .|.++|-      ....|....|+|.+.
T Consensus       115 ~Y~Yrvg------~~~~s~~~~F~T~p~  136 (427)
T PLN02533        115 VYYYKCG------GPSSTQEFSFRTPPS  136 (427)
T ss_pred             EEEEEEC------CCCCccceEEECCCC
Confidence            9999984      222366688998654

>KOG1480|consensus

Probab=82.71  E-value=0.74  Score=51.10  Aligned_cols=74  Identities=28%  Similarity=0.554  Sum_probs=55.7

Q ss_pred             EEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCCCCcee-ecceEEEEeee--cCCeEEEEEEEecCcce
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTPDDKLP-VGRNVLTLDRV--TESENYTCIAASVLGVI  182 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~  182 (904)
                      |...|.. ..|..+....+.|.. .|.|...++|+|+ +..+.....+. ..++.+.|...  .|.|.|+|.|.|..+..
T Consensus       132 f~~~p~~-q~V~~~s~~~l~cr~pe~~paae~~w~k~-e~~~~pd~n~~~~~d~~li~~~arlsd~~nytc~a~ni~~~r  209 (909)
T KOG1480|consen  132 FEQSPVG-QEVQEETTLQLPCRPPEGDPKAEVEWLKN-EVVIDPDANVIRASDHNLIISQARLSDSGNYTCEATNIVAKR  209 (909)
T ss_pred             hccChhh-heecccccccccccCcccchhhhhhcccc-CCCCCccccchhhhcCCccccchhhhhcccceeeeehhhccc
Confidence            5556666 777788888888865 5899999999999 66555533332 35677888766  79999999999988763

>PHA02865 MHC-like TNF binding protein; Provisional

Probab=81.45  E-value=6.8  Score=40.08  Aligned_cols=38  Identities=21%  Similarity=0.357  Sum_probs=24.6

Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccC-CC-CeEEEeeC
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PM-PFVKWRKG  142 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~k~  142 (904)
                      ....||+....-..    ..+ .++|.|.|.|. |. ..|.|.|+
T Consensus       199 ~R~vpP~V~Vt~k~----~~~-~~tL~C~A~GFYP~~I~v~W~kd  238 (338)
T PHA02865        199 PKPVTPTVKVTGEE----LGD-NTTLFCTFDSHYPSSVAAKWYNS  238 (338)
T ss_pred             CCCCCCceEEeccc----CCC-CceEEEEEEeEeCCccEEEEEec
Confidence            35667765432211    112 57999999994 55 57899999

>cd05874 Ig6_NrCAM Sixth immunoglobulin (Ig)-like domain of NrCAM (Ng (neuronglia) CAM-related cell adhesion molecule)

Probab=81.42  E-value=9.7  Score=29.67  Aligned_cols=27  Identities=15%  Similarity=0.050  Sum_probs=21.2

Q ss_pred             ceEEEcCCCCC----CeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPY----TEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~----~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|..+.+.    +++.|+|.|.|..|..
T Consensus        39 g~l~i~~~~~~~~~~d~G~Y~C~A~N~~G~~   69 (77)
T cd05874          39 GTLVINIMNGEKAEAYEGVYQCTARNERGAA   69 (77)
T ss_pred             ceEEEeccccCCCCCCCEEEEEEEEcCCCeE
Confidence            55777777653    5799999999999864

Ig6_NrCAM: sixth immunoglobulin (Ig)-like domain of NrCAM (Ng (neuronglia) CAM-related cell adhesion molecule). NrCAM belongs to the L1 subfamily of cell adhesion molecules (CAMs) and is comprised of an extracellular region having six Ig-like domains and five fibronectin type III domains, a transmembrane region, and an intracellular domain. NrCAM is primarily expressed in the nervous system.

>cd05758 Ig5_KIRREL3-like Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2) and similar proteins

Probab=81.37  E-value=12  Score=30.82  Aligned_cols=28  Identities=21%  Similarity=0.322  Sum_probs=24.2

Q ss_pred             ceEEEcCCCCCC-eEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYT-EYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~-~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.+++..+ .+.|.|.|.|..|...
T Consensus        64 s~L~I~~v~~~d~~G~Y~C~A~N~~G~~~   92 (98)
T cd05758          64 STLTISNTQESDFQTSYNCTAWNSFGSGT   92 (98)
T ss_pred             EEEEECCccccccceeEEEEEEcCCCccc
Confidence            579999999954 8999999999999753

Ig5_KIRREL3-like: domain similar to the fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2). This protein has five Ig-like domains, one transmembrane domain, and a cytoplasmic tail. Included in this group is mammalian Kirrel (Neph1), Kirrel2 (Neph3), and Drosophila RST (irregular chiasm C-roughest) protein. These proteins contain multiple Ig domains, have properties of cell adhesion molecules, and are important in organ development.

>PHA02982 hypothetical protein; Provisional

Probab=81.29  E-value=4.5  Score=37.39  Aligned_cols=68  Identities=16%  Similarity=0.333  Sum_probs=46.1

Q ss_pred             eEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCC----------------Cc--ee----ecceEEEEeee--cCCe
Q psy8771         115 LEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPD----------------DK--LP----VGRNVLTLDRV--TESE  169 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~----------------~~--~~----~~~~~l~i~~l--~d~g  169 (904)
                      +....|+++.|+|..... -.-...|.++.+..+...                .+  +.    ....+|+|+++  +..|
T Consensus        34 v~a~vd~~V~L~C~~~~~~~i~~~~W~~~~~~~la~~~~~~~~iN~~~y~~~~~kd~y~~sv~g~~STLTIkk~~i~N~G  113 (251)
T PHA02982         34 VNATVDQEVKLQCLFKDADEISRAMWKGDAGFMLAQEANGGTGINAFNYVPGPYKDKYALSVSGNSSTFTMKKPDPQNLG  113 (251)
T ss_pred             hhccCCCcEEEEecCCCcchhhhheeeCCCCeEEEeeecCcceeccccccCCccceeEEEEEeccceeEEeccCCcccCC
Confidence            777889999999995533 334578999755433210                01  11    24568999988  6789


Q ss_pred             EEEEEEEecCcce
Q psy8771         170 NYTCIAASVLGVI  182 (904)
Q Consensus       170 ~Y~c~a~n~~g~~  182 (904)
                      -|+|.|....+..
T Consensus       114 CYtc~~ks~~~k~  126 (251)
T PHA02982        114 CFTCEAKDAEGKE  126 (251)
T ss_pred             ceEEEEecCCCch
Confidence            9999998766543

>cd05749 Ig2_Tyro3_like Second immunoglobulin (Ig)-like domain of Axl/Tyro3 receptor tyrosine kinases (RTKs)

Probab=80.94  E-value=7.9  Score=30.56  Aligned_cols=25  Identities=24%  Similarity=0.194  Sum_probs=20.1

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++.  +.+.|.|.|.|..|..
T Consensus        49 s~L~i~~~~--d~g~Y~C~A~N~~G~~   73 (81)
T cd05749          49 SVLNVPGLN--ETSKFSCEAHNAKGVT   73 (81)
T ss_pred             CEEEEcccc--CCeEEEEEEEeccCcE
Confidence            568888875  4579999999999964

Ig2_Tyro3_like: the second immunoglobulin (Ig)-like domain in the Axl/Tyro3 family of receptor tyrosine kinases (RTKs). This family includes Axl (also known as Ark, Ufo, and Tyro7), Tyro3 (also known as Sky, Rse, Brt, Dtk, and Tif), and Mer (also known as Nyk, c-Eyk, and Tyro12). Axl/Tyro3 family receptors have an extracellular portion with two Ig-like domains followed by two fibronectin-types III (FNIII) domains, a membrane-spanning single helix, and a cytoplasmic tyrosine kinase domain. Axl, Tyro3 and Mer are widely expressed in adult tissues, though they show higher expression in the brain, in the lymphatic and vascular systems, and in the testis. Axl, Tyro3, and Mer bind the vitamin K dependent protein Gas6 with high affinity, and in doing so activate their tyrosine kinase activity. Axl/Gas6 signaling may play a part in cell adhesion processes, prevention of apoptosis, and c

>PHA03042 CD47-like protein; Provisional

Probab=80.84  E-value=6.3  Score=38.39  Aligned_cols=69  Identities=14%  Similarity=0.281  Sum_probs=45.4

Q ss_pred             CCCeEEEEEEccC-----CCCeEEEeeCCccccCCCCceeecceEEEEeee-cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         120 DSPLNLSCVAVGS-----PMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV-TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       120 g~~~~l~C~~~g~-----p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l-~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      .+.+.+.|.+..-     ....|.|..++...+..+..   +..+|++..- .-.|.|+|.|.+...+.+....|.-.
T Consensus        31 N~TV~IpC~v~n~~~~ni~~~~V~Wkf~~~~If~~n~t---n~aSL~~~f~~~l~GNYTCEv~~l~n~gk~~IeLk~~  105 (286)
T PHA03042         31 NKTIVIVCNLNLLIYYNISNIHINWKFNNKVIFKKNNT---NTSSLKFNFSKNLSGNYTCEAINKFNKIKNTIELQYV  105 (286)
T ss_pred             CceEEEEeecCChhhcCccceEEEEEeCCeeEEEecCC---cceEEEEeccccCCCceeEEEeecccCccEEEEEEEE
Confidence            4778899988742     45579999983333322221   3356777666 46899999998877666666655544

>cd04967 Ig1_Contactin First Ig domain of contactin

Probab=80.15  E-value=6.7  Score=31.78  Aligned_cols=27  Identities=19%  Similarity=0.139  Sum_probs=22.4

Q ss_pred             ceEEEcCCC-CCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLS-PYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~-p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++. ..+.+.|+|.|.|..|..
T Consensus        58 ~~L~i~~~~~~~d~G~Y~C~a~N~~G~~   85 (91)
T cd04967          58 GNLVISNPSKAKDAGRYQCLASNIVGTV   85 (91)
T ss_pred             CEEEEecCCccCCCEEEEEEEEcCCCEE
Confidence            467888876 588999999999999853

Ig1_Contactin: First Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III(FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 weeks postnata

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	904
2dlh_A	121	Solution Structure Of The Second Fn3 Domain Of Huma		4e-26
2dlh_A	121	Solution Structure Of The Second Fn3 Domain Of Huma		1e-05
2edx_A	134	Solution Structures Of The Fn3 Domain Of Human Rece		5e-20
2yd9_A	304	Crystal Structure Of The N-Terminal Ig1-3 Module Of		1e-19
2dju_A	106	Solution Structures Of The Fn3 Domain Of Human Rece		4e-17
2ede_A	114	Solution Structure Of The Sixth Fibronectin Type Ii		1e-12
1x5h_A	132	The Solution Structure Of The Third Fibronectin Typ		1e-11
1va9_A	122	Solution Structure Of The Second Fniii Domain Of Ds		2e-11
2ed9_A	124	Solution Structure Of The Third Fibronectin Type Ii		5e-11
3p4l_A	211	Crystal Structure Of A Hemojuvelin-Binding Fragment		1e-10
3p4l_A	211	Crystal Structure Of A Hemojuvelin-Binding Fragment		5e-04
1x5z_A	115	Solution Structure Of The Fibronectin Type-Iii Doma		2e-09
1x5z_A	115	Solution Structure Of The Fibronectin Type-Iii Doma		8e-04
1x5k_A	124	The Solution Structure Of The Sixth Fibronectin Typ		4e-09
3f7p_C	248	Crystal Structure Of A Complex Between Integrin Bet		2e-08
3f7p_C	248	Crystal Structure Of A Complex Between Integrin Bet		2e-05
3f7r_A	249	First Pair Of Fibronectin Type Iii Domains And Part		2e-08
3f7r_A	249	First Pair Of Fibronectin Type Iii Domains And Part		2e-05
3f7q_A	234	First Pair Of Fibronectin Type Iii Domains And Part		4e-08
3f7q_A	234	First Pair Of Fibronectin Type Iii Domains And Part		2e-05
1qg3_A	195	Crystal Structure Of A Tandem Pair Of Fibronectin T		6e-08
1qg3_A	195	Crystal Structure Of A Tandem Pair Of Fibronectin T		1e-05
1fnf_A	368	Fragment Of Human Fibronectin Encompassing Type-Iii		1e-07
1fnf_A	368	Fragment Of Human Fibronectin Encompassing Type-Iii		1e-05
1fnf_A	368	Fragment Of Human Fibronectin Encompassing Type-Iii		2e-05
2nzi_A	305	Crystal Structure Of Domains A168-A170 From Titin L		9e-07
2edy_A	103	Solution Structures Of The Fn3 Domain Of Human Rece		2e-06
2ed7_A	119	Solution Structure Of The First Fibronectin Type Ii		2e-06
1uey_A	127	Solution Structure Of The First Fibronectin Type Ii		5e-06
2jll_A	389	Crystal Structure Of Ncam2 Igiv-Fn3ii Length = 389		5e-06
1mfn_A	184	Solution Nmr Structure Of Linked Cell Attachment Mo		8e-06
1mfn_A	184	Solution Nmr Structure Of Linked Cell Attachment Mo		1e-05
1x5f_A	120	The Solution Structure Of The First Fibronectin Typ		8e-06
1x5g_A	116	The Solution Structure Of The Second Fibronectin Ty		8e-06
2xyc_A	291	Crystal Structure Of Ncam2 Igiv-Fn3i Length = 291		9e-06
3r8q_A	290	Structure Of Fibronectin Domain 12-14 Length = 290		2e-05
1fnh_A	271	Crystal Structure Of Heparin And Integrin Binding S		2e-05
1x5l_A	111	Solution Structure Of The Second Fn3 Domain Of Eph		3e-05
2v5y_A	731	Crystal Structure Of The Receptor Protein Tyrosine		3e-05
3lpw_A	197	Crystal Structure Of The Fniii-Tandem A77-A78 From		1e-04
3lpw_A	197	Crystal Structure Of The Fniii-Tandem A77-A78 From		3e-04
3lcy_A	197	Titin Ig Tandem Domains A164-A165 Length = 197		2e-04
2ck2_A	96	Structure Of Core-Swapped Mutant Of Fibronectin Len		3e-04
2eo9_A	118	Solution Structure Of The Fifth Ig-Like Domain From		4e-04
2vkx_A	209	Human Ncam, Fn3 Domains 1 And 2, M610r Mutant Lengt		4e-04
2vkw_A	209	Human Ncam, Fn3 Domains 1 And 2 Length = 209		4e-04
3t1w_A	375	Structure Of The Four-Domain Fragment Fn7b89 Of Onc		5e-04
2haz_A	105	Crystal Structure Of The First Fibronectin Domain O		5e-04
4gh7_B	285	Crystal Structure Of Anticalin N7a In Complex With		5e-04
2e3v_A	122	Crystal Structure Of The First Fibronectin Type Iii		5e-04
2ed8_A	106	Solution Structure Of The Second Fibronectin Type I		6e-04
1bqu_A	215	Cytokyne-Binding Region Of Gp130 Length = 215		7e-04
3mtr_A	215	Crystal Structure Of The Ig5-Fn1 Tandem Of Human Nc		7e-04
3l5h_A	589	Crystal Structure Of The Full Ectodomain Of Human G		7e-04
1wfn_A	119	The Fourth Fn3 Domain Of Human Sidekick-2 Length =		8e-04
1pvh_A	201	Crystal Structure Of Leukemia Inhibitory Factor In		9e-04

>pdb|2DLH|A Chain A, Solution Structure Of The Second Fn3 Domain Of Human Receptor-Type Tyrosine-Protein Phosphatase Delta Length = 121

Iteration: 1
 Score =  116 bits (291), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 79/115 (68%)
Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++ P+  +T +  P +APRDVQ R LSS+T+++QW EPE PNGQI GY+VYYT D 
Sbjct: 1   GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDP 60
Query: 524 SLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQG 578
           +  ++ W    V ++Q+TTI +L P   Y+++V AFTS+G GPLS+ + V TQ G
Sbjct: 61  TQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115

>pdb|2DLH|A Chain A, Solution Structure Of The Second Fn3 Domain Of Human Receptor-Type Tyrosine-Protein Phosphatase Delta Length = 121

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHI----VYYKL 754
           G   ++ P+  +T +  P + P++V    LSST+I + W+ P  E  NG I    VYY +
Sbjct: 1   GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEP--EEPNGQIQGYRVYYTM 58
Query: 755 ---QFVET--GRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITI 809
              Q V      + +++ I T+ N        L     Y + VLA TSIGDGP S  I +
Sbjct: 59  DPTQHVNNWMKHNVADSQITTIGN--------LVPQKTYSVKVLAFTSIGDGPLSSDIQV 110
Query: 810 RTH 812
            T 
Sbjct: 111 ITQ 113

>pdb|2EDX|A Chain A, Solution Structures Of The Fn3 Domain Of Human Receptor- Type Tyrosine-Protein Phosphatase F Length = 134

Iteration: 1
 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++  I  RT Q  P APPQ V C  + ST++R+SW PPP +  NG I  Y + +  
Sbjct: 1   GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEA 60
Query: 759 TGRSDSEASIVT--LKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
               D    +V    +  +S+ L  L+KWTEYR+WV A T +G GP S P+ +RT ED P
Sbjct: 61  VDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVP 120
Query: 817 S 817
           S
Sbjct: 121 S 121

>pdb|2YD9|A Chain A, Crystal Structure Of The N-Terminal Ig1-3 Module Of Human Receptor Protein Tyrosine Phosphatase Sigma Length = 304

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           V+ V P+FSI P +  E+M    +N++CVAVGSPMP+VKW +G   +LTP+D +PVGRNV
Sbjct: 201 VQNVAPRFSILPMSH-EIMPGGNVNITCVAVGSPMPYVKWMQGAE-DLTPEDDMPVGRNV 258
Query: 160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQ 191
           L L  V +S NYTC+A S LGVIE    + V+
Sbjct: 259 LELTDVKDSANYTCVAMSSLGVIEAVAQITVK 290

>pdb|2DJU|A Chain A, Solution Structures Of The Fn3 Domain Of Human Receptor- Type Tyrosine-Protein Phosphatase F Length = 106

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 201 PVAPLDVKISEVTATSVRLDW-TYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRN 259
           P  P+D+ ++E TATSV L W +  SE + YY IQY+      P+ E+ G+ TT Y++  
Sbjct: 8   PKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGG 67
Query: 260 LSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
           LSP++EY F ++AVN++GRGPPS      TGE
Sbjct: 68  LSPFSEYAFRVLAVNSIGRGPPSEAVRARTGE 99

>pdb|2EDE|A Chain A, Solution Structure Of The Sixth Fibronectin Type Iii Domain Of Human Netrin Receptor Dcc Length = 114

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 481 PGTAPRDVQV--RPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNN 538
           P +AP+D+ V  R      +++ W  P   NG+IT Y ++YT D+++P+  W  + +  +
Sbjct: 8   PTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGD 67
Query: 539 QLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
           +LT  I DL   T+Y  R+QA  S G GPLS P+L +T +
Sbjct: 68  RLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLK 107

>pdb|1X5H|A Chain A, The Solution Structure Of The Third Fibronectin Type Iii Domain Of Human Neogenin Length = 132

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 60/120 (50%)
Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++  + VRT   VP A PQN+S E  +S SI I W+PP     NG I  YK+++ +
Sbjct: 1   GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRK 60
Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE 818
             R       +    Q S +++ L + TEY   V A T  G GP++  ++  T E D  E
Sbjct: 61  ASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDE 120

>pdb|1VA9|A Chain A, Solution Structure Of The Second Fniii Domain Of Dscaml1 Protein Length = 122

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG-RSDSEASIV 769
           T++  P  PP +V+ +P++S SI+++W+ P  E  NG I  Y++ + E    S+ + SIV
Sbjct: 10  TEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV 69
Query: 770 TLK---NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
            +K   +   + LD LKK+ +Y + V A    G GPSS  I   T E  PS
Sbjct: 70  EMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPS 120

>pdb|2ED9|A Chain A, Solution Structure Of The Third Fibronectin Type Iii Domain Of Human Netrin Receptor Dcc Length = 124

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G G +T  I V T   VP APPQNVS E ++S SI++SW PPP    NG I  YK++  +
Sbjct: 11  GPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRK 70
Query: 759 TGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814
           T R      + TL+ N   ++   L+K ++Y   V A T  G GP S   T  T E+
Sbjct: 71  TTR---RGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPEN 124

>pdb|3P4L|A Chain A, Crystal Structure Of A Hemojuvelin-Binding Fragment Of Neogenin Length = 211

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 446 ALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYE--PGTAPRDVQV--RPLSSSTMVIQ 501
            L PNTLY    +    +G  ++T  +      +E  P + P+DV V  +     T+++ 
Sbjct: 70  GLKPNTLYE--FSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVN 127
Query: 502 WDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFT 560
           W  P   NG+ITGY +YY+ D +  +  W  + V  N+LT  I +LT  T Y  ++QA  
Sbjct: 128 WQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARN 187
Query: 561 SVGPGPLSAPVLVKT 575
           S G GP+S  V  +T
Sbjct: 188 SKGMGPMSEAVQFRT 202

>pdb|3P4L|A Chain A, Crystal Structure Of A Hemojuvelin-Binding Fragment Of Neogenin Length = 211

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 663 AKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
           A  K+        +Y +TGL PNTLY   +     R     +      T + VP +PP++
Sbjct: 52  ANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKD 111
Query: 723 VSC--EPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV--TLKNQTSFV 778
           V+   +     +I ++W+PP    +NG I  Y + +     ++    ++   + N+ +  
Sbjct: 112 VTVVSKEGKPKTIIVNWQPP--SEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQ 169
Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           + EL   T Y   + A  S G GP S  +  RT
Sbjct: 170 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRT 202

>pdb|1X5Z|A Chain A, Solution Structure Of The Fibronectin Type-Iii Domain Of Human Protein Tyrosine Phosphatase, Receptor Type, D Isoform 4 Variant Length = 115

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTG 681
            +P + +A    ET++ L+W+ P    + I +YEL + D     +    I    +Y L G
Sbjct: 19  GQPLNFKAEPESETSILLSWTPPRS--DTIANYELVYKDGEHGEEQRITIEPGTSYRLQG 76
Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713
           L PN+LYY  LAA+SP+G GA+T  I  RT Q
Sbjct: 77  LKPNSLYYFRLAARSPQGLGASTAEISARTMQ 108

>pdb|1X5Z|A Chain A, Solution Structure Of The Fibronectin Type-Iii Domain Of Human Protein Tyrosine Phosphatase, Receptor Type, D Isoform 4 Variant Length = 115

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++  I V T+  VPG P  N   EP S TSI +SW PP   RS+  I  Y+L + +
Sbjct: 1   GSSGSSGDIQVITQTGVPGQP-LNFKAEPESETSILLSWTPP---RSD-TIANYELVYKD 55
Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
                 E   +T++  TS+ L  LK  + Y   + A +  G G S+  I+ RT +
Sbjct: 56  G--EHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 108

>pdb|1X5K|A Chain A, The Solution Structure Of The Sixth Fibronectin Type Iii Domain Of Human Neogenin Length = 124

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 481 PGTAPRDVQV--RPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNN 538
           P + P+DV V  +     T+++ W  P   NG+ITGY +YY+ D +  +  W  + V  N
Sbjct: 18  PTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGN 77
Query: 539 QLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
           +LT  I +LT  T Y  ++QA  S G GP+S  V  +T
Sbjct: 78  RLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRT 115

>pdb|3F7P|C Chain C, Crystal Structure Of A Complex Between Integrin Beta4 And Plectin Length = 248

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 14/191 (7%)
Query: 438 KTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSST 497
           K P      LYP   Y + + A   +GEG  +  +  RT Q  P + P  +    +SS+ 
Sbjct: 55  KVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVP-SEPGRLAFNVVSSTV 113
Query: 498 MVIQWDEPETPNGQITGYKVYY--TQDQSLPMSAWETQVVDN--NQLTTISDLTPHTIYT 553
             + W EP   NG+IT Y+V Y    D + P+   +  +VDN  N++  I +L     Y 
Sbjct: 114 TQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYR 173
Query: 554 IRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISY 613
             V+A    G GP    ++    Q  P +P       +    +         SGE+  S+
Sbjct: 174 YTVKARNGAGWGPEREAIINLATQ--PKRP-------MSIPIIPDIPIVDAQSGEDYDSF 224
Query: 614 ELYWNDTYAKP 624
            +Y +D    P
Sbjct: 225 LMYSDDVLRSP 235

>pdb|3F7P|C Chain C, Crystal Structure Of A Complex Between Integrin Beta4 And Plectin Length = 248

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVL 779
           PQN + +   S  I  +W PP     +G  + Y++++   G S+SEA ++  K   S  L
Sbjct: 8   PQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDSK-VPSVEL 61
Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE 818
             L  + +Y + V A  + G+GP S  ++ RTH++ PSE
Sbjct: 62  TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSE 100

>pdb|3F7R|A Chain A, First Pair Of Fibronectin Type Iii Domains And Part Of The Connecting Segment Of The Integrin Beta4 Length = 249

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 14/191 (7%)
Query: 438 KTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSST 497
           K P      LYP   Y + + A   +GEG  +  +  RT Q  P + P  +    +SS+ 
Sbjct: 56  KVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVP-SEPGRLAFNVVSSTV 114
Query: 498 MVIQWDEPETPNGQITGYKVYY--TQDQSLPMSAWETQVVDN--NQLTTISDLTPHTIYT 553
             + W EP   NG+IT Y+V Y    D + P+   +  +VDN  N++  I +L     Y 
Sbjct: 115 TQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYR 174
Query: 554 IRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISY 613
             V+A    G GP    ++    Q  P +P       +    +         SGE+  S+
Sbjct: 175 YTVKARNGAGWGPEREAIINLATQ--PKRP-------MSIPIIPDIPIVDAQSGEDYDSF 225
Query: 614 ELYWNDTYAKP 624
            +Y +D    P
Sbjct: 226 LMYSDDVLRSP 236

>pdb|3F7R|A Chain A, First Pair Of Fibronectin Type Iii Domains And Part Of The Connecting Segment Of The Integrin Beta4 Length = 249

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVL 779
           PQN + +   S  I  +W PP     +G  + Y++++   G S+SEA ++  K   S  L
Sbjct: 9   PQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDSK-VPSVEL 62
Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE 818
             L  + +Y + V A  + G+GP S  ++ RTH++ PSE
Sbjct: 63  TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSE 101

>pdb|3F7Q|A Chain A, First Pair Of Fibronectin Type Iii Domains And Part Of The Connecting Segment Of The Integrin Beta4 Length = 234

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 14/187 (7%)
Query: 438 KTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSST 497
           K P      LYP   Y + + A   +GEG  +  +  RT Q  P + P  +    +SS+ 
Sbjct: 56  KVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVP-SEPGRLAFNVVSSTV 114
Query: 498 MVIQWDEPETPNGQITGYKVYY--TQDQSLPMSAWETQVVDN--NQLTTISDLTPHTIYT 553
             + W EP   NG+IT Y+V Y    D + P+   +  +VDN  N++  I +L     Y 
Sbjct: 115 TQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYR 174
Query: 554 IRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISY 613
             V+A    G GP    ++    Q  P +P       +    +         SGE+  S+
Sbjct: 175 YTVKARNGAGWGPEREAIINLATQ--PKRP-------MSIPIIPDIPIVDAQSGEDYDSF 225
Query: 614 ELYWNDT 620
            +Y +D 
Sbjct: 226 LMYSDDV 232

>pdb|3F7Q|A Chain A, First Pair Of Fibronectin Type Iii Domains And Part Of The Connecting Segment Of The Integrin Beta4 Length = 234

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVL 779
           PQN + +   S  I  +W PP     +G  + Y++++   G S+SEA ++  K   S  L
Sbjct: 9   PQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDSK-VPSVEL 62
Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE 818
             L  + +Y + V A  + G+GP S  ++ RTH++ PSE
Sbjct: 63  TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSE 101

>pdb|1QG3|A Chain A, Crystal Structure Of A Tandem Pair Of Fibronectin Type Iii Domains From The Cytoplasmic Tail Of Integrin Alpha6 Beta4 Length = 195

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKV-YYTQDQSLPMSAWETQVVDNNQLTT 542
           AP++   +   S  +   W     P+G+  GY+V Y+ Q  S      E  ++D+   + 
Sbjct: 4   APQNPNAKAAGSRKIHFNW---LPPSGKPMGYRVKYWIQGDSES----EAHLLDSKVPSV 56
Query: 543 -ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWS 601
            +++L P+  Y ++V A+ + G GP S+ V  +T Q VPS+P  L    +  T   L+W+
Sbjct: 57  ELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWA 116
Query: 602 KPTHSGENIISYELYW 617
           +P  +   I +YE+ +
Sbjct: 117 EPAETNGEITAYEVCY 132

>pdb|1QG3|A Chain A, Crystal Structure Of A Tandem Pair Of Fibronectin Type Iii Domains From The Cytoplasmic Tail Of Integrin Alpha6 Beta4 Length = 195

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVL 779
           PQN + +   S  I  +W PP     +G  + Y++++   G S+SEA ++  K   S  L
Sbjct: 5   PQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDSK-VPSVEL 58
Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE 818
             L  + +Y + V A  + G+GP S  ++ RTH++ PSE
Sbjct: 59  TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSE 97

>pdb|1FNF|A Chain A, Fragment Of Human Fibronectin Encompassing Type-Iii Repeats 7 Through 10 Length = 368

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 40/193 (20%)
Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQY-------KPKAANTPYSEISGIITTYY 255
           +P  +  S++TA S  + W  P  T+  Y I++       +P+    P+S  S       
Sbjct: 188 SPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRVPHSRNS------I 241
Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQW 315
           T+ NL+P TEY   I+A+N    G   SP +I    T     PRD++V   + ++++I W
Sbjct: 242 TLTNLTPGTEYVVSIVALN----GREESPLLIGQQSTV-SDVPRDLEVVAATPTSLLISW 296
Query: 316 DEPETPNGQITAKHHRRI----------------GLVETYSLTGLYPNTLYYIWLAAQSP 359
           D P      +T +++R                  G   T +++GL P   Y I + A + 
Sbjct: 297 DAP-----AVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTG 351
Query: 360 RGEG-ATTPPIPV 371
           RG+  A++ PI +
Sbjct: 352 RGDSPASSKPISI 364

>pdb|1FNF|A Chain A, Fragment Of Human Fibronectin Encompassing Type-Iii Repeats 7 Through 10 Length = 368

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           L P T Y + +++   + E       P+R +Q     +P  +    +++++  + W  P 
Sbjct: 156 LLPGTEYVVSVSSVYEQHEST-----PLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPR 210
Query: 507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGP 566
                ITGY++ +   +       E +V  +    T+++LTP T Y + + A      G 
Sbjct: 211 ---ATITGYRIRH-HPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALN----GR 262
Query: 567 LSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKP 603
             +P+L+  Q  V   PRDL  V    T++ ++W  P
Sbjct: 263 EESPLLIGQQSTVSDVPRDLEVVAATPTSLLISWDAP 299

>pdb|1FNF|A Chain A, Fragment Of Human Fibronectin Encompassing Type-Iii Repeats 7 Through 10 Length = 368

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/365 (21%), Positives = 137/365 (37%), Gaps = 72/365 (19%)
Query: 498 MVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQ 557
           + + W+   TP+  ITGY++  T       ++ E  V  +    T  +L+P   Y + V 
Sbjct: 19  LTVSWERSTTPD--ITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVY 76
Query: 558 AFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWS--------------KP 603
              +V     S P+       VP  P DLR  +I    + + W+               P
Sbjct: 77  ---TVKDDKESVPISDTIIPAVP-PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSP 132
Query: 604 THSGENIISYELYWNDTYA------------------------------------KPRDL 627
             + E++    +  +D                                        P  +
Sbjct: 133 VKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGI 192
Query: 628 RAVDIQETAVTLAWSKP--THSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPN 685
              DI   + T+ W  P  T +G  I  +  +++    + +  R      + +LT L P 
Sbjct: 193 DFSDITANSFTVHWIAPRATITGYRIRHHPEHFS---GRPREDRVPHSRNSITLTNLTPG 249
Query: 686 TLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERS 745
           T Y + + A + R E     P+ +  +  V   P +++     + TS+ ISW+ P V   
Sbjct: 250 TEYVVSIVALNGREES----PLLIGQQSTVSDVP-RDLEVVAATPTSLLISWDAPAVT-- 302
Query: 746 NGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGP-SS 804
              + YY++ + ETG +          ++++  +  LK   +Y I V A T  GD P SS
Sbjct: 303 ---VRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASS 359
Query: 805 YPITI 809
            PI+I
Sbjct: 360 KPISI 364

>pdb|2NZI|A Chain A, Crystal Structure Of Domains A168-A170 From Titin Length = 305

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 131 GSPMPFVKWRKGQN-IELTPDDKLPVGRNVLTL------DRVTESENYTCIAASVLGVIE 183
           G P P + W+KGQ+ I+     ++ V R+  +L      +R  ++  Y   A +  G+ +
Sbjct: 130 GKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVER-KDAGFYVVCAKNRFGIDQ 188
Query: 184 TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE----TLLYYVIQYKPKA 239
            +  + V         +P  P  VK+S+V+  SV L WT P+      +  Y+++   K 
Sbjct: 189 KTVELDVA-------DVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVE---KC 238
Query: 240 ANTP--YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPA 285
           A T   +  +     T YTV NL   T Y+F +IA N  G   PS P+
Sbjct: 239 ATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPS 286

>pdb|2EDY|A Chain A, Solution Structures Of The Fn3 Domain Of Human Receptor- Type Tyrosine-Protein Phosphatase F Length = 103

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVL 779
           PQN+    L++++  ++W+PP +   NG I+ Y + F +    +S+  +  +   T F L
Sbjct: 12  PQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDI---NSQQELQNITTDTRFTL 68
Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
             LK  T Y I V A TS G GP S  I  RT
Sbjct: 69  TGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRT 100

>pdb|2ED7|A Chain A, Solution Structure Of The First Fibronectin Type Iii Domain Of Human Netrin Receptor Dcc Length = 119

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           +APRDV    +SS  + + W  P    G I  + V+++++      A  T    + QLT 
Sbjct: 19  SAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALNTTQPGSLQLT- 77
Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           + +L P  +YT RV A+   GPG  S P+ V TQ
Sbjct: 78  VGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQ 111

>pdb|1UEY|A Chain A, Solution Structure Of The First Fibronectin Type Iii Domain Of Human Kiaa0343 Protein Length = 127

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Query: 195 APLLTLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTP-----YSE 246
           AP+  +P  P D+++++    SV+L WT   +    +  ++I+Y+  A + P      +E
Sbjct: 11  APVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYE-DAMHKPGLWHHQTE 69
Query: 247 ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS 282
           +SG  TT     NLSPY  Y F ++AVN++G+  PS
Sbjct: 70  VSGTQTT--AQLNLSPYVNYSFRVMAVNSIGKSLPS 103

>pdb|2JLL|A Chain A, Crystal Structure Of Ncam2 Igiv-Fn3ii Length = 389

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 121 SPLNLSCVAVGSPMPFVKWRKGQNI----ELTPDDKLPVGRNVLTLDRVTESEN----YT 172
           +P+N+SC    +P   + WR+ + +      T       GR ++ L+    S+N    Y 
Sbjct: 116 NPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMI-LEIAPTSDNDFGRYN 174
Query: 173 CIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET----L 228
           C A + +G        + Q     L  +P +P  VKI E++ T+ ++ +  P       +
Sbjct: 175 CTATNHIGT-------RFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPI 227
Query: 229 LYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288
            +Y +  K  A+       S  + T   + NL P T YE  + AVN  G+G  S   +  
Sbjct: 228 HHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQ 287
Query: 289 T 289
           T
Sbjct: 288 T 288

>pdb|1MFN|A Chain A, Solution Nmr Structure Of Linked Cell Attachment Modules Of Mouse Fibronectin Containing The Rgd And Synergy Regions, 20 Structures Length = 184

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 9/138 (6%)
Query: 151 DKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKIS 210
           D++P  RN +TL  +     Y     +V G  E+  ++  Q   + +      P D+++ 
Sbjct: 48  DRVPPSRNSITLTNLNPGTEYVVSIIAVNGREESPPLIGQQATVSDI------PRDLEVI 101
Query: 211 EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS--GIITTYYTVRNLSPYTEYEF 268
             T TS+ + W  P+ ++ YY I Y     N+P  E +  G  +T  T+ N+ P  +Y  
Sbjct: 102 ASTPTSLLISWEPPAVSVRYYRITYGETGGNSPVQEFTVPGSKST-ATINNIKPGADYTI 160
Query: 269 YIIAVNNLGRGPPSSPAV 286
            + AV   G  P SS  V
Sbjct: 161 TLYAVTGRGDSPASSKPV 178

>pdb|1MFN|A Chain A, Solution Nmr Structure Of Linked Cell Attachment Modules Of Mouse Fibronectin Containing The Rgd And Synergy Regions, 20 Structures Length = 184

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
            P    + DI   + T+ W  P       I    +   +  + +  R      + +LT L
Sbjct: 4   SPTGFDSSDITANSFTVHWVAPRAPITGYI-IRHHAEHSVGRPRQDRVPPSRNSITLTNL 62
Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPV 742
            P T Y + + A + R E       P+  +Q      P+++     + TS+ ISWEPP V
Sbjct: 63  NPGTEYVVSIIAVNGREESP-----PLIGQQATVSDIPRDLEVIASTPTSLLISWEPPAV 117
Query: 743 ERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGP 802
                 + YY++ + ETG +          ++++  ++ +K   +Y I + A T  GD P
Sbjct: 118 S-----VRYYRITYGETGGNSPVQEFTVPGSKSTATINNIKPGADYTITLYAVTGRGDSP 172
Query: 803 -SSYPITI 809
            SS P++I
Sbjct: 173 ASSKPVSI 180

>pdb|1X5F|A Chain A, The Solution Structure Of The First Fibronectin Type Iii Domain Of Human Neogenin Length = 120

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 467 ATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET-PNGQITGYKVYYTQDQSL 525
           ATT P+P         +APRDV    +S+  + + W  P + P+G    Y V+YT++  +
Sbjct: 12  ATTGPLP---------SAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKE-GI 61
Query: 526 PMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
                E          TI +L P T+Y  RV A    G G  SAP+ V+TQ
Sbjct: 62  ARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQ 112

>pdb|1X5G|A Chain A, The Solution Structure Of The Second Fibronectin Type Iii Domain Of Human Neogenin Length = 116

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
           +PG  P N+     S TSI ++WE P     NG I  YKL ++E G +D E  +    + 
Sbjct: 17  LPGPAP-NLRAYAASPTSITVTWETP--VSGNGEIQNYKLYYMEKG-TDKEQDVDVSSH- 71
Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814
            S+ ++ LKK+TEY   V+A    G G S+  + +RT  D
Sbjct: 72  -SYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110

>pdb|2XYC|A Chain A, Crystal Structure Of Ncam2 Igiv-Fn3i Length = 291

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 121 SPLNLSCVAVGSPMPFVKWRKGQNI----ELTPDDKLPVGRNVLTLDRVTESEN----YT 172
           +P+N+SC    +P   + WR+ + +      T       GR ++ L+    S+N    Y 
Sbjct: 116 NPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMI-LEIAPTSDNDFGRYN 174
Query: 173 CIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET----L 228
           C A + +G        + Q     L  +P +P  VKI E++ T+ ++ +  P       +
Sbjct: 175 CTATNHIGT-------RFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPI 227
Query: 229 LYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288
            +Y +  K  A+       S  + T   + NL P T YE  + AVN  G+G  S   +  
Sbjct: 228 HHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQ 287
Query: 289 T 289
           T
Sbjct: 288 T 288

>pdb|3R8Q|A Chain A, Structure Of Fibronectin Domain 12-14 Length = 290

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 121/313 (38%), Gaps = 63/313 (20%)
Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYT-QDQSLPMSAWETQVVDNNQLTT 542
           AP D++   ++ +++  QW  P   N Q+TGY+V  T ++++ PM   E  +  ++    
Sbjct: 23  APTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMK--EINLAPDSSSVV 77
Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSK 602
           +S L   T Y + V A          A  +V T + V S PR  R  D  ET +T++W  
Sbjct: 78  VSGLMVATKYEVSVYALKDTLTS-RPAQGVVTTLENV-SPPRRARVTDATETTITISWRT 135
Query: 603 PTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY 662
            T                                            E I  +++      
Sbjct: 136 KT--------------------------------------------ETITGFQVDAVPAN 151
Query: 663 AKAKHHRRIG-LVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721
            +    R I   V +Y++TGL P T Y I+L   +   + A + P+ +     +    P 
Sbjct: 152 GQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLN---DNARSSPVVIDASTAIDA--PS 206
Query: 722 NVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDE 781
           N+     +  S+ +SW+PP        I  Y +++ + G    E         T   +  
Sbjct: 207 NLRFLATTPNSLLVSWQPP-----RARITGYIIKYEKPGSPPREVVPRPRPGVTEATITG 261
Query: 782 LKKWTEYRIWVLA 794
           L+  TEY I+V+A
Sbjct: 262 LEPGTEYTIYVIA 274

>pdb|1FNH|A Chain A, Crystal Structure Of Heparin And Integrin Binding Segment Of Human Fibronectin Length = 271

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 121/313 (38%), Gaps = 63/313 (20%)
Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYT-QDQSLPMSAWETQVVDNNQLTT 542
           AP D++   ++ +++  QW  P   N Q+TGY+V  T ++++ PM   E  +  ++    
Sbjct: 4   APTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMK--EINLAPDSSSVV 58
Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSK 602
           +S L   T Y + V A          A  +V T + V S PR  R  D  ET +T++W  
Sbjct: 59  VSGLMVATKYEVSVYALKDTLTS-RPAQGVVTTLENV-SPPRRARVTDATETTITISWRT 116
Query: 603 PTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY 662
            T                                            E I  +++      
Sbjct: 117 KT--------------------------------------------ETITGFQVDAVPAN 132
Query: 663 AKAKHHRRIG-LVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721
            +    R I   V +Y++TGL P T Y I+L   +   + A + P+ +     +    P 
Sbjct: 133 GQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLN---DNARSSPVVIDASTAIDA--PS 187
Query: 722 NVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDE 781
           N+     +  S+ +SW+PP        I  Y +++ + G    E         T   +  
Sbjct: 188 NLRFLATTPNSLLVSWQPP-----RARITGYIIKYEKPGSPPREVVPRPRPGVTEATITG 242
Query: 782 LKKWTEYRIWVLA 794
           L+  TEY I+V+A
Sbjct: 243 LEPGTEYTIYVIA 255

>pdb|1X5L|A Chain A, Solution Structure Of The Second Fn3 Domain Of Eph Receptor A8 Protein Length = 111

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 496 STMVIQWDEPETPNGQITGYKV-YYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTI 554
           +++ + W EPE PNG I  Y++ YY +D+   M ++ T      +  T+S L P T Y  
Sbjct: 25  TSVSLLWQEPEQPNGIILEYEIKYYEKDKE--MQSYSTLKAVTTR-ATVSGLKPGTRYVF 81
Query: 555 RVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
           +V+A TS G G  S  + V+T  G PS P
Sbjct: 82  QVRARTSAGCGRFSQAMEVET--GKPSGP 108

>pdb|2V5Y|A Chain A, Crystal Structure Of The Receptor Protein Tyrosine Phosphatase Mu Ectodomain Length = 731

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 65/316 (20%)
Query: 411 YIW--LAAQSPRGEGATTPPIPVRTKQYGKTPG------------FGEQALYPNTLYYIW 456
           Y+W  L A S  G+G    PI  R  +Y    G            +    L P+T Y I 
Sbjct: 277 YLWIQLNANSINGDG----PIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEIS 332
Query: 457 LAAQSPRGEGATTPPIPV---RTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT 513
           +    P GEG T  P P    RTK  +P   PR ++V  + S  + I+W+       +  
Sbjct: 333 VLLTRP-GEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCH 391
Query: 514 GYK--VYYT-----QDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGP 566
            Y   V+Y      Q+Q     +W+T+  +++   TI++L+P+T  ++++      G   
Sbjct: 392 SYNLTVHYCYQVGGQEQVREEVSWDTE--NSHPQHTITNLSPYTNVSVKLILMNPEGRKE 449
Query: 567 LSAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPR 625
            S  ++V+T + +P   P +       E  + L W +PT +   I  YE+ +        
Sbjct: 450 -SQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITY-------- 500
Query: 626 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPN 685
             +AV   +  + L+                       ++    ++G    +   GLYP 
Sbjct: 501 --KAVSSFDPEIDLS----------------------NQSGRVSKLGNETHFLFFGLYPG 536
Query: 686 TLYYIWLAAQSPRGEG 701
           T Y   + A + +G G
Sbjct: 537 TTYSFTIRASTAKGFG 552

>pdb|3LPW|A Chain A, Crystal Structure Of The Fniii-Tandem A77-A78 From The A-Band Of Titin Length = 197

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 20/182 (10%)
Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAANTPYSEIS-GIIT 252
           +  P  P D+K+ EVT TSV L W  P       +  Y+++ K ++    YS ++     
Sbjct: 3   MDTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVE-KRESTRKAYSTVATNCHK 61
Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMV 312
           T + V  L     Y F ++A N  G G P+  A        P   P  + +  ++ +++ 
Sbjct: 62  TSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERP-LPPGKITLMDVTRNSVS 120
Query: 313 IQWDEPETPNG--------QITAKHHRRIGLVETY-----SLTGLYPNTLYYIWLAAQSP 359
           + W++PE   G        ++  K   +     T      ++TGL     Y   ++AQ+ 
Sbjct: 121 LSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATVKVTEATITGLIQGEEYSFRVSAQNE 180
Query: 360 RG 361
           +G
Sbjct: 181 KG 182

>pdb|3LPW|A Chain A, Crystal Structure Of The Fniii-Tandem A77-A78 From The A-Band Of Titin Length = 197

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 619 DTYAKPRDLRAVDIQETAVTLAWSKP-THSGENIISYELYWNDTYAKAKHHRRIGLVET- 676
           DT   P+DL+  ++ +T+VTL W  P    G  I +Y +   ++  KA         +T 
Sbjct: 4   DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTS 63
Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA----PPQNVSCEPLSSTS 732
           + +  L     YY  + A++  G G     +P  T + V  +    PP  ++   ++  S
Sbjct: 64  WKVDQLQEGCSYYFRVLAENEYGIG-----LPAETAESVKASERPLPPGKITLMDVTRNS 118
Query: 733 IRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK 772
           + +SWE P  E   G  +   +  ++T  SD  A+  T+K
Sbjct: 119 VSLSWEKP--EHDGGSRILGYIVEMQTKGSDKWATCATVK 156

>pdb|3LCY|A Chain A, Titin Ig Tandem Domains A164-A165 Length = 197

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 119 LDSPLNLSCVAVGSPMPFVKW-RKGQNIELTPDDKLPVGRNVLTLDRVTESEN----YTC 173
           L     LSC  VG P+P +KW R G+ +  +   K+       TL  +TE +     YTC
Sbjct: 21  LGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTC 80
Query: 174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY 223
           IA + +G +ETS+ + +Q    P    P  PL  K      +++RL   Y
Sbjct: 81  IATNEVGEVETSSKLLLQA--TPQFH-PGYPLKEKYYGAVGSTLRLHVMY 127

>pdb|2CK2|A Chain A, Structure Of Core-Swapped Mutant Of Fibronectin Length = 96

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 204 PLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS--GIITTYYTVRNLS 261
           P D+++  VT TS  + W  P+ T+ Y  + Y     N+P  EI+  G  +T YT+  L 
Sbjct: 5   PRDIEVVAVTPTSALISWDAPAVTIRYIRLTYGETGGNSPVQEITLPGSKST-YTISGLK 63
Query: 262 PYTEYEFYIIAVNNLGRGPPSS-PAVI 287
           P T+Y   + +V   G  P SS PA I
Sbjct: 64  PGTDYTVTLYSVTGRGDSPASSKPASI 90

>pdb|2EO9|A Chain A, Solution Structure Of The Fifth Ig-Like Domain From Human Roundabout Homo1 Length = 118

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 117 VMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN-VLTL--DRVTESENYTC 173
           V +D    LSCVA GSP+P + WRK   +  T D ++    N VL +   ++ ++  YTC
Sbjct: 20  VAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTC 79
Query: 174 IAASVLGVIETSTIVKVQ 191
           IA++  G    S  ++VQ
Sbjct: 80  IASTPSGEATWSAYIEVQ 97

>pdb|2VKX|A Chain A, Human Ncam, Fn3 Domains 1 And 2, M610r Mutant Length = 209

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVVDNNQ-- 539
           ++P   QV P SS+  V Q+DEPE   G  I  YK  +   +++    W ++  D  +  
Sbjct: 10  SSPSIDQVEPYSSTAQV-QFDEPEATGGVPILKYKAEW---RAVGEEVWHSKWYDAKEAS 65
Query: 540 ---LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
              + TI  L P T Y +R+ A    G G +SA    KTQ
Sbjct: 66  MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 105

>pdb|2VKW|A Chain A, Human Ncam, Fn3 Domains 1 And 2 Length = 209

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVVDNNQ-- 539
           ++P   QV P SS+  V Q+DEPE   G  I  YK  +   +++    W ++  D  +  
Sbjct: 10  SSPSIDQVEPYSSTAQV-QFDEPEATGGVPILKYKAEW---RAVGEEVWHSKWYDAKEAS 65
Query: 540 ---LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
              + TI  L P T Y +R+ A    G G +SA    KTQ
Sbjct: 66  MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 105

>pdb|3T1W|A Chain A, Structure Of The Four-Domain Fragment Fn7b89 Of Oncofetal Fibronectin Length = 375

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 114/295 (38%), Gaps = 56/295 (18%)
Query: 498 MVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQ 557
           + + W+   TP+  ITGY++  T       ++ E  V  +    T  +L+P   Y + V 
Sbjct: 20  LTVSWERSTTPD--ITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVY 77
Query: 558 AFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 617
              +V     S P+       VP Q  DL  VDI ++++ L W+ P +S   II Y +  
Sbjct: 78  ---TVKDDKESVPISDTIIPEVP-QLTDLSFVDITDSSIGLRWT-PLNSS-TIIGYRI-- 129
Query: 618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETY 677
                            T V         +GE I  +E + + +            V  Y
Sbjct: 130 -----------------TVVA--------AGEGIPIFEDFVDSS------------VGYY 152
Query: 678 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISW 737
           ++TGL P   Y I +      GE A     P    Q     PP ++    +   ++R++W
Sbjct: 153 TVTGLEPGIDYDISVITLINGGESA-----PTTLTQQTAVPPPTDLRFTNIGPDTMRVTW 207
Query: 738 EPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWV 792
            PPP       +V Y    V+     +E SI    N  + VL  L   TEY + V
Sbjct: 208 APPPSIDLTNFLVRYSP--VKNEEDVAELSISPSDN--AVVLTNLLPGTEYVVSV 258

>pdb|2HAZ|A Chain A, Crystal Structure Of The First Fibronectin Domain Of Human Ncam1 Length = 105

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVVDNNQ-- 539
           ++P   QV P SS+  V Q+DEPE   G  I  YK  +   +++    W ++  D  +  
Sbjct: 8   SSPSIDQVEPYSSTAQV-QFDEPEATGGVPILKYKAEW---RAVGEEVWHSKWYDAKEAS 63
Query: 540 ---LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
              + TI  L P T Y +R+ A    G G +SA    KTQ
Sbjct: 64  MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 103

>pdb|4GH7|B Chain B, Crystal Structure Of Anticalin N7a In Complex With Oncofetal Fibronectin Fragment Fn7b8 Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 114/295 (38%), Gaps = 56/295 (18%)
Query: 498 MVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQ 557
           + + W+   TP+  ITGY++  T       ++ E  V  +    T  +L+P   Y + V 
Sbjct: 20  LTVSWERSTTPD--ITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVY 77
Query: 558 AFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 617
              +V     S P+       VP Q  DL  VDI ++++ L W+ P +S   II Y +  
Sbjct: 78  ---TVKDDKESVPISDTIIPEVP-QLTDLSFVDITDSSIGLRWT-PLNSS-TIIGYRI-- 129
Query: 618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETY 677
                            T V         +GE I  +E + + +            V  Y
Sbjct: 130 -----------------TVVA--------AGEGIPIFEDFVDSS------------VGYY 152
Query: 678 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISW 737
           ++TGL P   Y I +      GE A     P    Q     PP ++    +   ++R++W
Sbjct: 153 TVTGLEPGIDYDISVITLINGGESA-----PTTLTQQTAVPPPTDLRFTNIGPDTMRVTW 207
Query: 738 EPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWV 792
            PPP       +V Y    V+     +E SI    N  + VL  L   TEY + V
Sbjct: 208 APPPSIDLTNFLVRYSP--VKNEEDVAELSISPSDN--AVVLTNLLPGTEYVVSV 258

>pdb|2E3V|A Chain A, Crystal Structure Of The First Fibronectin Type Iii Domain Of Neural Cell Adhesion Molecule Splicing Isoform From Human Muscle Culture Lambda-4.4 Length = 122

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 489 QVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVVDNNQ-----LTT 542
           QV P SS T  +Q+DEPE   G  I  YK  +   +++    W ++  D  +     + T
Sbjct: 15  QVEPYSS-TAQVQFDEPEATGGVPILKYKAEW---RAVGEEVWHSKWYDAKEASXEGIVT 70
Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           I  L P T Y +R+ A    G G +SA    KTQ
Sbjct: 71  IVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 104

>pdb|2ED8|A Chain A, Solution Structure Of The Second Fibronectin Type Iii Domain Of Human Netrin Receptor Dcc Length = 106

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 721 QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLD 780
           +N+     S TSI I+WEPP    +NG +  Y+L   E      +   V   +  S+ L+
Sbjct: 12  ENLQAVSTSPTSILITWEPPAY--ANGPVQGYRLFCTEVSTGKEQNIEV---DGLSYKLE 66
Query: 781 ELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814
            LKK+TEY +  LA    G G S+  IT+ T  D
Sbjct: 67  GLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100

>pdb|1BQU|A Chain A, Cytokyne-Binding Region Of Gp130 Length = 215

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 205 LDVKISEVTATSVRLDWTYPS---ETLLYYVIQYKPKAANTPYSEI----SGIITTYYTV 257
           L V  SE  ++ ++L WT PS     +L Y IQY+ K A+T +S+I    +    + +TV
Sbjct: 110 LSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAST-WSQIPPEDTASTRSSFTV 168
Query: 258 RNLSPYTEYEFYIIAVNNLGRG 279
           ++L P+TEY F I  +   G+G
Sbjct: 169 QDLKPFTEYVFRIRCMKEDGKG 190

>pdb|3MTR|A Chain A, Crystal Structure Of The Ig5-Fn1 Tandem Of Human Ncam Length = 215

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVVDNNQ-- 539
           ++P   QV P SS+  V Q+DEPE   G  I  YK  +   +++    W ++  D  +  
Sbjct: 115 SSPSIDQVEPYSSTAQV-QFDEPEATGGVPILKYKAEW---RAVGEEVWHSKWYDAKEAS 170
Query: 540 ---LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
              + TI  L P T Y +R+ A    G G +SA    KTQ
Sbjct: 171 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 210

>pdb|3L5H|A Chain A, Crystal Structure Of The Full Ectodomain Of Human Gp130: New Insights Into The Molecular Assembly Of Receptor Complexes Length = 589

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 205 LDVKISEVTATSVRLDWTYPS---ETLLYYVIQYKPKAANTPYSEI----SGIITTYYTV 257
           L V  SE  ++ ++L WT PS     +L Y IQY+ K A+T +S+I    +    + +TV
Sbjct: 205 LSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAST-WSQIPPEDTASTRSSFTV 263
Query: 258 RNLSPYTEYEFYIIAVNNLGRG---PPSSPAVITTGETEPGTAP 298
           ++L P+TEY F I  +   G+G     S  A   T E  P  AP
Sbjct: 264 QDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAP 307

>pdb|1WFN|A Chain A, The Fourth Fn3 Domain Of Human Sidekick-2 Length = 119

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 25/127 (19%)
Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++ P  VRT +  PG     +    +  +++ + W EP   NG +TGY++      
Sbjct: 1   GSSGSSGPQLVRTHEDVPGPVGH-LSFSEILDTSLKVSWQEPGEKNGILTGYRI------ 53
Query: 524 SLPMSAWETQVVDNNQLT----------TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLV 573
                +WE     N ++T           ++ LT  T YTI V A TS G G +SA  + 
Sbjct: 54  -----SWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI- 107
Query: 574 KTQQGVP 580
               GVP
Sbjct: 108 --SSGVP 112

>pdb|1PVH|A Chain A, Crystal Structure Of Leukemia Inhibitory Factor In Complex With Gp130 Length = 201

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 205 LDVKISEVTATSVRLDWTYPS---ETLLYYVIQYKPKAANTPYSEI----SGIITTYYTV 257
           L V  SE  ++ ++L WT PS     +L Y IQY+ K A+T +S+I    +    + +TV
Sbjct: 106 LSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAST-WSQIPPEDTASTRSSFTV 164
Query: 258 RNLSPYTEYEFYIIAVNNLGRG 279
           ++L P+TEY F I  +   G+G
Sbjct: 165 QDLKPFTEYVFRIRCMKEDGKG 186

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	904
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	7e-67
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	2e-48
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	2e-41
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	2e-32
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	2e-23
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	2e-16
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	1e-60
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	2e-51
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	1e-45
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	5e-37
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	3e-26
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	5e-20
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	2e-17
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	3e-60
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	1e-59
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	2e-54
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	1e-51
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	7e-45
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	5e-57
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	1e-51
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	4e-43
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	4e-39
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	8e-32
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	1e-29
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	2e-20
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	6e-18
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	1e-52
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	1e-35
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	2e-30
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	1e-24
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	3e-20
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	6e-52
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	9e-49
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	1e-44
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	2e-29
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	1e-26
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	4e-19
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	2e-18
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	5e-50
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	2e-33
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	2e-32
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	2e-31
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	8e-15
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	7e-11
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	6e-50
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	5e-48
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	6e-35
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	8e-27
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	1e-16
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	2e-49
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	6e-41
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	3e-31
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	1e-29
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	1e-28
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	3e-22
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	2e-16
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	4e-44
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	4e-39
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	9e-37
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	3e-36
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	1e-35
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	2e-18
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	4e-18
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	2e-04
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	1e-42
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	4e-38
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	5e-38
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	1e-37
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	3e-35
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	3e-14
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	2e-42
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	2e-41
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	8e-34
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	2e-29
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	2e-25
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	2e-17
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	5e-15
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	4e-41
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	3e-12
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	2e-10
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	2e-10
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	1e-06
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	2e-39
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	4e-30
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	7e-24
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	2e-15
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	5e-14
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	3e-10
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	5e-08
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	2e-39
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	3e-32
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	2e-23
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	8e-19
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	4e-14
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	9e-12
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	6e-05
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	4e-39
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	1e-33
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	3e-20
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	1e-15
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	2e-14
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	6e-12
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	1e-04
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	5e-04
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	5e-38
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	9e-32
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	2e-27
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	1e-21
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	2e-18
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	1e-17
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	4e-04
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	8e-38
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	3e-36
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	1e-20
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	6e-20
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	2e-19
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	2e-11
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	1e-07
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	6e-05
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	2e-35
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	5e-31
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	7e-21
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	3e-13
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	7e-12
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	6e-10
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	3e-05
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	2e-35
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	2e-31
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	6e-31
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	2e-26
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	7e-26
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	1e-04
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	7e-35
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	2e-33
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	7e-19
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	5e-16
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	9e-13
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	2e-08
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	8e-05
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	3e-33
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	3e-29
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	3e-27
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	1e-24
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	2e-20
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	1e-04
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	2e-32
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	7e-13
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	3e-10
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	3e-05
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	3e-04
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	2e-32
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	1e-21
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	1e-15
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	2e-13
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	1e-10
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	2e-07
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	5e-05
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	8e-32
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	1e-28
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	2e-21
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	3e-18
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	5e-17
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	1e-10
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	3e-05
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	2e-31
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	6e-25
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	2e-15
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	2e-14
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	2e-10
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	5e-08
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	8e-05
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	2e-31
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	2e-29
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	1e-15
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	8e-10
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	1e-09
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	1e-08
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	4e-31
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	7e-28
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	5e-16
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	7e-13
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	4e-11
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	3e-10
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	6e-04
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	5e-31
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	4e-29
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	8e-27
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	2e-23
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	7e-19
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	3e-16
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	7e-31
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	3e-30
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	5e-20
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	4e-18
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	2e-16
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	4e-07
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	1e-04
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	1e-30
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	1e-28
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	2e-25
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	4e-20
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	8e-18
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	4e-16
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	2e-30
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	1e-27
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	7e-15
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	3e-14
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	4e-11
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	1e-07
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	5e-05
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	2e-30
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	6e-25
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	9e-19
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	6e-17
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	1e-15
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	4e-07
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	1e-04
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	6e-30
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	5e-29
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	2e-17
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	1e-13
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	2e-11
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	6e-06
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	2e-05
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	1e-29
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	4e-29
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	1e-24
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	1e-22
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	3e-20
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	3e-13
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	2e-29
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	9e-27
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	8e-24
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	3e-20
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	2e-18
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	9e-09
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	7e-05
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	6e-29
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	4e-18
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	5e-14
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	3e-13
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	2e-10
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	1e-06
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	7e-04
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	1e-28
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	5e-22
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	8e-16
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	3e-14
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	1e-11
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	1e-07
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	2e-04
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	1e-28
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	6e-28
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	4e-17
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	3e-16
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	3e-14
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	1e-06
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	2e-05
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	3e-28
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	3e-27
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	2e-17
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	2e-16
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	1e-14
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	2e-11
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	9e-05
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	4e-28
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	7e-25
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	5e-19
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	5e-14
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	9e-13
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	2e-06
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	6e-28
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	3e-27
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	3e-23
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	4e-18
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	7e-18
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	2e-27
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	2e-23
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	3e-16
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	2e-15
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	3e-14
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	4e-07
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	5e-05
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	5e-27
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	1e-23
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	3e-12
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	4e-09
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	6e-08
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	5e-07
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	6e-27
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	3e-12
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	3e-12
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	1e-06
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	4e-26
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	9e-26
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	4e-23
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	1e-16
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	8e-04
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	6e-26
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	2e-21
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	1e-19
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	3e-15
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	9e-10
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	1e-25
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	6e-22
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	3e-15
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	3e-14
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	4e-14
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	6e-05
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	2e-24
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	1e-22
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	5e-15
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	4e-13
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	4e-13
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	9e-06
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	4e-24
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	2e-21
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	1e-14
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	2e-13
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	3e-13
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	3e-06
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	3e-23
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	3e-13
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	1e-12
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	4e-10
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	8e-06
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	6e-05
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	7e-23
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	5e-22
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	5e-19
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	3e-16
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	7e-12
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	7e-07
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	1e-22
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	6e-15
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	9e-12
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	3e-10
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	3e-10
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	2e-07
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	7e-06
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	2e-22
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	4e-21
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	1e-20
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	1e-12
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	2e-11
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	2e-05
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	3e-22
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	2e-21
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	2e-21
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	4e-13
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	1e-11
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	8e-07
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	3e-22
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	2e-10
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	2e-08
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	3e-06
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	4e-22
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	1e-21
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	3e-18
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	5e-17
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	2e-14
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	2e-13
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	2e-05
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	1e-21
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	1e-13
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	2e-10
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	4e-09
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	3e-21
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	2e-13
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	4e-11
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	4e-08
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	9e-06
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	5e-21
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	4e-12
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	2e-11
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	2e-04
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	1e-20
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	3e-20
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	8e-18
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	9e-11
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	1e-10
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	1e-04
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	3e-20
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	2e-10
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	3e-09
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	4e-05
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	3e-20
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	5e-15
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	1e-12
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	9e-08
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	2e-06
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	3e-20
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	6e-14
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	8e-13
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	7e-08
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	1e-06
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	4e-04
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	3e-20
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	3e-16
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	9e-13
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	5e-07
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	6e-20
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	1e-12
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	4e-12
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	4e-06
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	3e-04
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	9e-20
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	5e-14
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	6e-13
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	3e-07
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	1e-05
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	1e-19
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	2e-19
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	3e-15
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	3e-07
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	5e-07
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	2e-19
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	2e-15
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	7e-12
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	6e-06
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	7e-06
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	7e-05
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	2e-19
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	9e-12
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	4e-11
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	1e-04
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	3e-19
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	1e-09
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	1e-09
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	4e-19
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	2e-18
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	3e-13
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	2e-11
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	3e-10
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	3e-08
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	5e-19
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	5e-17
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	6e-16
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	1e-07
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	2e-06
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	1e-18
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	2e-16
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	7e-13
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	4e-12
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	1e-08
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	6e-04
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	1e-18
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	4e-18
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	2e-14
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	4e-14
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	2e-10
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	1e-04
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	2e-18
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	6e-10
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	7e-10
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	2e-06
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	9e-04
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	2e-18
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	2e-14
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	5e-13
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	2e-06
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	1e-04
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	2e-18
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	6e-12
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	3e-11
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	2e-04
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	2e-18
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	7e-10
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	9e-10
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	1e-07
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	4e-04
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	2e-18
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	5e-16
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	2e-11
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	3e-07
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	5e-07
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	4e-05
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	3e-18
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	1e-13
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	2e-09
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	3e-09
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	4e-04
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	3e-18
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	3e-17
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	2e-14
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	3e-09
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	5e-08
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	4e-18
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	5e-10
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	6e-10
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	6e-05
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	4e-18
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	1e-14
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	3e-14
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	5e-13
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	1e-12
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	8e-10
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	4e-18
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	2e-16
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	2e-15
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	2e-09
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	9e-07
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	8e-04
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	5e-18
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	6e-09
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	1e-08
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	2e-04
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	5e-18
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	1e-10
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	2e-10
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	3e-05
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	4e-04
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	2e-17
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	1e-11
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	7e-11
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	1e-05
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	3e-04
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	3e-17
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	4e-13
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	4e-13
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	8e-13
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	5e-07
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	3e-05
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	4e-17
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	5e-09
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	1e-08
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	8e-04
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	5e-17
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	2e-16
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	5e-13
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	4e-07
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	1e-05
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	5e-05
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	6e-17
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	2e-14
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	9e-13
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	6e-10
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	4e-08
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	3e-05
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	2e-16
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	6e-15
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	2e-11
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	1e-05
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	4e-05
2crm_A	120	Fibronectin type-III domain containing protein 3A;	3e-16
2crm_A	120	Fibronectin type-III domain containing protein 3A;	3e-13
2crm_A	120	Fibronectin type-III domain containing protein 3A;	3e-11
2crm_A	120	Fibronectin type-III domain containing protein 3A;	1e-06
2crm_A	120	Fibronectin type-III domain containing protein 3A;	1e-04
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	4e-16
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	4e-16
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	5e-13
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	2e-10
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	3e-05
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	5e-05
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	4e-16
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	1e-11
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	3e-09
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	2e-06
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	5e-16
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	5e-09
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	9e-09
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	1e-15
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	4e-12
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	6e-12
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	2e-10
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	1e-07
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	6e-06
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	2e-04
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	2e-15
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	6e-10
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	1e-07
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	3e-15
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	4e-06
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	4e-05
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	5e-15
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	4e-11
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	6e-09
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	6e-08
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	2e-06
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	8e-15
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	3e-09
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	5e-08
2crz_A	110	Fibronectin type-III domain containing protein 3A;	1e-14
2crz_A	110	Fibronectin type-III domain containing protein 3A;	4e-11
2crz_A	110	Fibronectin type-III domain containing protein 3A;	6e-10
2crz_A	110	Fibronectin type-III domain containing protein 3A;	2e-04
2crz_A	110	Fibronectin type-III domain containing protein 3A;	4e-04
3kvq_A	108	Vascular endothelial growth factor receptor 2; veg	3e-14
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	3e-14
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	3e-11
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	7e-11
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	5e-10
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	7e-09
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	2e-05
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	4e-14
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	7e-04
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	6e-14
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	6e-09
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	4e-07
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	3e-05
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	3e-05
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	1e-13
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	4e-09
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	2e-08
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	1e-06
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	2e-13
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	6e-07
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	5e-06
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	3e-04
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	9e-04
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	2e-13
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	1e-10
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	4e-09
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	5e-07
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	2e-06
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	6e-06
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	2e-13
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	2e-11
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	8e-10
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	3e-08
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	2e-06
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	3e-13
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	7e-12
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	1e-11
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	3e-13
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	1e-08
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	4e-13
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	4e-10
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	2e-07
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	3e-05
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	4e-13
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	4e-13
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	4e-11
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	2e-07
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	9e-07
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	8e-13
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	9e-11
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	9e-13
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-05
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	1e-12
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	8e-11
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	8e-10
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	9e-10
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	1e-09
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	6e-09
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	2e-08
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	1e-12
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	2e-07
2yr3_A	99	Myosin light chain kinase, smooth muscle; IG domai	1e-12
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	2e-12
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	1e-09
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	4e-08
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	2e-06
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	3e-12
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	4e-10
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	8e-08
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	3e-12
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	1e-10
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	2e-06
3bfo_A	91	Mucosa-associated lymphoid tissue lymphoma translo	3e-12
3irg_A	100	Titin; IG-like, titin, OBSL1, complex, alternative	3e-12
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	3e-12
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	2e-11
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	6e-11
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	1e-09
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	2e-09
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	6e-09
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	3e-12
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	1e-11
2erj_C	247	Cytokine receptor common gamma chain; immune syste	4e-12
2erj_C	247	Cytokine receptor common gamma chain; immune syste	2e-09
2erj_C	247	Cytokine receptor common gamma chain; immune syste	2e-06
2erj_C	247	Cytokine receptor common gamma chain; immune syste	3e-06
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	4e-12
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	4e-10
1nct_A	106	Titin; cell adhesion, glycoprotein, transmembrane,	4e-12
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	5e-12
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	2e-11
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	1e-08
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	4e-07
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	4e-07
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	2e-06
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	5e-12
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	4e-09
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	5e-09
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	5e-12
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	2e-10
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	1e-08
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	4e-05
1gl4_B	98	Basement membrane-specific heparan sulfate proteog	7e-12
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	8e-12
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	1e-08
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	2e-08
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	4e-08
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	3e-07
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	3e-05
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	1e-11
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	6e-10
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	6e-05
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	1e-11
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	2e-04
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	4e-04
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	1e-11
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	3e-08
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	6e-08
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	3e-04
2kkq_A	116	Myotilin; unknown function, actin-binding, cell me	1e-11
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	2e-11
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	4e-08
2r15_A	212	Myomesin-1; sarcomeric protein, IG-like domains, h	2e-11
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	2e-11
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	4e-10
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	4e-10
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	2e-07
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	2e-07
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	4e-07
3caf_A	100	Fibroblast growth factor receptor 2; FGFR2, D2, AT	2e-11
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	3e-11
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	1e-08
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	6e-08
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	3e-11
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	9e-10
2ens_A	96	Advanced glycosylation END product-specific recept	3e-11
3mpc_A	103	FN3-like protein; fibronectin, FN(III), unknown fu	3e-11
3mpc_A	103	FN3-like protein; fibronectin, FN(III), unknown fu	8e-05
2dm2_A	110	Palladin; beta-sandwich, KIAA0992, actin-associate	3e-11
1fhg_A	154	Telokin; immunoglobulin fold, beta barrel, contrac	3e-11
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	3e-11
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	1e-09
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	3e-09
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	7e-06
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	4e-11
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	5e-11
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	4e-11
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	4e-09
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	3e-04
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	4e-04
3irg_B	107	Obscurin-like protein 1; IG-like, titin, OBSL1, co	5e-11
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	5e-11
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	3e-10
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	7e-08
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	3e-04
1u2h_A	99	APEG-1, aortic preferentially expressed protein 1;	5e-11
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	6e-11
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	2e-09
2dm3_A	110	KIAA0992 protein, palladin; beta-sandwich, myopall	7e-11
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	7e-11
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	6e-08
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	2e-07
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	3e-07
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	4e-04
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	8e-04
2eo9_A	118	Roundabout homolog 1; beta-sandwich, IG-fold, H-RO	1e-10
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	1e-10
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	2e-09
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	6e-08
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	1e-10
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	2e-09
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	3e-09
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	5e-09
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	1e-07
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	3e-07
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	1e-10
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	1e-09
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	2e-10
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	8e-04
1wit_A	93	Twitchin 18TH IGSF module; immunoglobulin superfam	2e-10
2edj_A	100	Roundabout homolog 2; KIAA1568 protein, beta sandw	2e-10
2kdg_A	100	Myotilin; immonoglobulin domain, actin-binding, st	2e-10
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	2e-10
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	3e-08
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	5e-06
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	2e-10
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	4e-08
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	3e-10
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	5e-09
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	3e-10
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	6e-10
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	4e-10
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	7e-10
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	7e-09
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	6e-07
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	1e-06
1g1c_A	99	Immunoglobulin-like domain I1 from titin; immunogl	4e-10
1iar_B	207	Protein (interleukin-4 receptor alpha chain); cyto	4e-10
1iar_B	207	Protein (interleukin-4 receptor alpha chain); cyto	5e-09
1iar_B	207	Protein (interleukin-4 receptor alpha chain); cyto	7e-06
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	5e-10
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	6e-09
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	3e-07
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	1e-06
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	7e-06
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	2e-04
3qp3_A	103	Titin; I-SET IG-like, sarcomere, M-BAND, transfera	5e-10
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	7e-10
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	5e-07
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	3e-06
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	8e-10
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	8e-08
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	1e-09
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	2e-09
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	1e-09
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	1e-06
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	2e-06
2ny1_B	184	T-cell surface glycoprotein CD4; HIV, GP120, CD4,	1e-09
3puc_A	99	Titin; I-SET IG-like domain, M-BAND, transferase;	1e-09
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	1e-09
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	1e-07
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	1e-06
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	7e-06
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	3e-04
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	1e-09
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	1e-08
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	1e-05
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	2e-09
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	8e-09
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	2e-09
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	3e-07
3rbs_A	207	Myomesin-1; immunoglobulin C-SET domain, contractI	2e-09
3rbs_A	207	Myomesin-1; immunoglobulin C-SET domain, contractI	2e-05
2cr3_A	99	Basic fibroblast growth factor receptor 1; IG fold	3e-09
2cqv_A	114	MLCK, myosin light chain kinase, smooth muscle and	3e-09
3up1_A	223	Interleukin-7 receptor subunit alpha; cytokine rec	3e-09
3up1_A	223	Interleukin-7 receptor subunit alpha; cytokine rec	2e-04
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	3e-09
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	4e-07
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	4e-09
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	3e-06
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	5e-09
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	2e-07
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	6e-07
1wio_A	363	CD4, T-cell surface glycoprotein CD4; immunoglobul	7e-09
3s35_X	122	Vascular endothelial growth factor receptor 2; ant	1e-08
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	2e-08
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	2e-07
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	7e-05
2csp_A	130	RIM-BP2, RIM binding protein 2; FN3 domain, struct	2e-08
2csp_A	130	RIM-BP2, RIM binding protein 2; FN3 domain, struct	4e-08
1wwc_A	118	Protein (NT-3 growth factor receptor TRKC); TRK re	2e-08
2ckn_A	95	Basic fibroblast growth factor receptor 1; kinase,	2e-08
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	3e-08
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	2e-07
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	8e-06
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	6e-05
2id5_A	477	Lingo-1, leucine rich repeat neuronal 6A; CNS-spec	3e-08
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	3e-08
4dep_C	349	Interleukin-1 receptor accessory protein; B-trefoi	5e-08
2cr6_A	115	KIAA1556 protein, obscurin; IG-fold, immunoglobuli	5e-08
3qr2_A	137	Basigin; CD147, EMMPRIN, immunoglobulin-like domai	5e-08
3jz7_A	214	MCAR, CAR, coxsackievirus and adenovirus receptor	6e-08
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	7e-08
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	2e-07
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	8e-08
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	4e-07
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	1e-07
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	1e-07
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	7e-05
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	4e-04
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	1e-07
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	1e-04
2cry_A	122	KIN of IRRE-like protein 3; IG fold, KIN of irregu	1e-07
2x1w_L	213	Vascular endothelial growth factor receptor 2; hor	2e-07
1vca_A	202	VCAM-D1,2, human vascular cell adhesion molecule-1	2e-07
2v9t_A	117	Roundabout homolog 1; structural protein-receptor	2e-07
2xot_A	361	Amphoterin-induced protein 1; cell adhesion, neuro	2e-07
2oz4_A	265	Intercellular adhesion molecule 1; IGSF domain, st	2e-07
1pd6_A	104	Cardiac MYBP-C;, myosin-binding protein C, cardiac	3e-07
2bk8_A	97	Connectin, M1, titin heart isoform N2-B; IG domain	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
2yuv_A	100	Myosin-binding protein C, SLOW-type; SLOW-type myo	4e-07
1wwb_X	103	Protein (brain derived neurotrophic factor recepto	5e-07
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	1e-06
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	4e-06
1nn8_R	302	CD155 antigen, poliovirus receptor; icosahedral vi	1e-06
1nn8_R	302	CD155 antigen, poliovirus receptor; icosahedral vi	9e-05
2e7c_A	118	Myosin-binding protein C, fast-type; IG-like domai	1e-06
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	1e-06
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	3e-05
3cx2_A	108	Myosin-binding protein C, cardiac-type; protonatio	3e-06
3sbw_C	222	Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-	3e-06
1he7_A	126	High affinity nerve growth factor receptor; transf	3e-06
3bp6_B	202	Programmed cell death 1 ligand 2; PD-1, PD-L2, com	3e-06
3tgx_A	219	Interleukin-21 receptor; class I cytokine, class I	4e-06
3tgx_A	219	Interleukin-21 receptor; class I cytokine, class I	7e-05
2eo1_A	102	OBSCN protein, cDNA FLJ14124 FIS, clone mamma10024	4e-06
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	5e-06
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	2e-04
2e7b_A	103	Obscurin; IG-like domain, structural genomics, NPP	6e-06
2ch8_A	201	BARF1, P33, 33 kDa early protein; viral protein, i	6e-06
2dku_A	103	KIAA1556 protein; beta-sandwich, IG-fold, obscurin	7e-06
1uc6_A	109	CNTF receptor, ciliary neurotrophic factor recepto	9e-06
1uc6_A	109	CNTF receptor, ciliary neurotrophic factor recepto	1e-04
2k1m_A	95	Myosin-binding protein C, cardiac-type; IG-I domai	1e-05
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	2e-05
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	5e-04
3b5h_A	184	Cervical EMMPRIN, HAB18G/CD147; IG-like domain, ce	2e-05
1gxe_A	139	Myosin binding protein C, cardiac-type; cytoskelet	2e-05
2dav_A	126	SLOW MYBP-C, myosin-binding protein C, SLOW-type;	2e-05
2eny_A	104	Obscurin; beta-sandwich, IG-fold, structural genom	4e-05
1oww_A	98	FN, fibronectin first type III module, CIG; fibron	4e-05
3d85_D	306	IL-12B, interleukin-12 subunit P40, cytotoxic lymp	6e-05
2edf_A	103	Obscurin; beta-sandwich, IG-fold, structural genom	8e-05
2edk_A	101	Myosin-binding protein C, fast-type; IG fold, fast	8e-05
2cpc_A	113	KIAA0657 protein; immunoglobulin domain, IG domain	1e-04
3zyj_A	440	Leucine-rich repeat-containing protein 4C; cell ad	1e-04
1x44_A	103	Myosin-binding protein C, SLOW-type; IG-like domai	2e-04
3zyi_A	452	Leucine-rich repeat-containing protein 4; cell adh	2e-04
1waa_A	93	Titin; metal binding protein, calmodulin-binding,	3e-04
3dlq_R	211	Interleukin-22 receptor subunit alpha-1; cytokine-	3e-04
2fbo_J	250	V1V2;, variable region-containing chitin-binding p	3e-04
3r4d_A	208	CEA-related cell adhesion molecule 1, isoform 1/2;	5e-04

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score =  233 bits (596), Expect = 7e-67
 Identities = 99/733 (13%), Positives = 190/733 (25%), Gaps = 167/733 (22%)

Query: 98  DPVRRVPPQFSIPPPALLEVMLDSPLNLSCV-------AVGSPMPFVKWRKGQNIELTPD 150
           DP   + P+  +       V L S     CV              ++ W+   +  +  +
Sbjct: 3   DPCGYISPESPV-------VQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTN-HFTIPKE 54

Query: 151 DKLPVGRNVLTL---DRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDV 207
               + R   ++   D  + +   TC   +   + +    + +     P       P ++
Sbjct: 55  QYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPP-----EKPKNL 109

Query: 208 KISEVTATSVRLDWTYPSETLL--YYVIQYK-PKAANTPYSEISGIITTYYTVRNLSPYT 264
                    +R +W    ET L   + ++ +                T+     +   + 
Sbjct: 110 SCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFV 169

Query: 265 EYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ 324
             E ++ A N LG+                       +V+P            P   +  
Sbjct: 170 NIEVWVEAENALGKVTSD-----------HINFDPVYKVKPNP----------PHNLSVI 208

Query: 325 ITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGE 384
            + +    + L  T           Y I                      QY        
Sbjct: 209 NSEELSSILKLTWTNPSIKSVIILKYNI----------------------QYRTKDASTW 246

Query: 385 QAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGE 444
                        ++++  L P T Y   +      G+G  +                  
Sbjct: 247 SQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDW---------------- 290

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTA----PRDVQVRPLSSSTMVI 500
                                   +      T +  P  A     +          T+ +
Sbjct: 291 ------------------------SEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQL 326

Query: 501 QWDE--PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQA 558
            W    P   NG+I  Y+V  T+ +S      +   V+  +LT       +  Y   +  
Sbjct: 327 VWKTLPPFEANGKILDYEVTLTRWKS----HLQNYTVNATKLTV---NLTNDRYLATLTV 379

Query: 559 FTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 618
              VG    +A + +       + P        ++  + + W+ P  S +    Y L W 
Sbjct: 380 RNLVGKSD-AAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKK---YILEW- 434

Query: 619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYS 678
                                                L                +  TY 
Sbjct: 435 -----------------------------------CVLSDKAPCITDWQQEDGTVHRTYL 459

Query: 679 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWE 738
              L  +  Y I +      G G+    I    KQ  P   P  V  + +      + W+
Sbjct: 460 RGNLAESKCYLITVTPVYADGPGSP-ESIKAYLKQAPPSKGP-TVRTKKVGKNEAVLEWD 517

Query: 739 PPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSI 798
             PV+  NG I  Y + +     +++  ++ +  + T + L  L   T Y + + A T  
Sbjct: 518 QLPVDVQNGFIRNYTIFYRTIIGNETAVNVDS--SHTEYTLSSLTSDTLYMVRMAAYTDE 575

Query: 799 GDGPSSYPITIRT 811
           G        T  T
Sbjct: 576 GGKDGPE-FTFTT 587

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score =  180 bits (459), Expect = 2e-48
 Identities = 74/469 (15%), Positives = 140/469 (29%), Gaps = 67/469 (14%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS--SSTMVIQWDE 504
                   +W+ A++  G+  T+  I            P ++ V      SS + + W  
Sbjct: 165 TVYFVNIEVWVEAENALGKV-TSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTN 223

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVG 563
           P   +  I  Y + Y    +   S    +   + + + T+ DL P T Y  R++     G
Sbjct: 224 PSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDG 283

Query: 564 PGPLS---APVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT 620
            G  S         T +  PS+                 +       +   + +L W   
Sbjct: 284 KGYWSDWSEEASGITYEDRPSKAPSFW------------YKIDPSHTQGYRTVQLVWK-- 329

Query: 621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLT 680
                                  P  +   I+ YE+       + K H +   V    LT
Sbjct: 330 --------------------TLPPFEANGKILDYEVTLT----RWKSHLQNYTVNATKLT 365

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPP 740
               N  Y   L  ++  G+      + +    +    P  ++   P     + + W  P
Sbjct: 366 VNLTNDRYLATLTVRNLVGKSDAAV-LTIPACDFQATHPVMDLKAFP-KDNMLWVEWTTP 423

Query: 741 PVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGD 800
             E    +I+ + +   +     ++          +++   L +   Y I V    + G 
Sbjct: 424 R-ESVKKYILEWCVLS-DKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGP 481

Query: 801 GPSSYPITIRTHEDDPS-----EVCPTQNDF-----RKNKKTNGSNFKGGY------LND 844
           G     I     +  PS            +       +      + F   Y      +  
Sbjct: 482 GSPE-SIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIG 540

Query: 845 PMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
                  D    E  ++ L  DT+Y +++AA T +G  D  +  T  TP
Sbjct: 541 NETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPE-FTFTTP 588

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score =  160 bits (405), Expect = 2e-41
 Identities = 49/476 (10%), Positives = 116/476 (24%), Gaps = 74/476 (15%)

Query: 449 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETP 508
            N      +       +      I        P   P+++         M  +W +    
Sbjct: 74  LNIQLTCNILTFGQLEQNVYGITIIS---GLPPE-KPKNLSCIVNEGKKMRCEW-DGGRE 128

Query: 509 NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLS 568
               T + +   +  +   +  + +       T            + V+A  ++G     
Sbjct: 129 THLETNFTLKS-EWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSD 187

Query: 569 APVLVKTQQGVPSQPRDLRAVDI--QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRD 626
                   +  P+ P +L  ++     + + L W+ P+     I+ Y +           
Sbjct: 188 HINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQ---------- 237

Query: 627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNT 686
                                      Y      T+++           ++++  L P T
Sbjct: 238 ---------------------------YRTKDASTWSQIPPEDTASTRSSFTVQDLKPFT 270

Query: 687 LYYIWLAAQSPRGEGA---TTPPIPVRTKQYVPGAPPQNV----SCEPLSSTSIRISWEP 739
            Y   +      G+G     +      T +  P   P               ++++ W+ 
Sbjct: 271 EYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKT 330

Query: 740 PPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIG 799
            P   +NG I+ Y++            ++    N T   +        Y   +     +G
Sbjct: 331 LPPFEANGKILDYEVTLTRWKSHLQNYTV----NATKLTV--NLTNDRYLATLTVRNLVG 384

Query: 800 DGPSSYPITIRTHEDDPSEVCPTQNDFRKNK--------KTNGSNFKGGYLNDPMRFD-- 849
              ++              V   +   + N         + +   +   +     +    
Sbjct: 385 KSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCI 444

Query: 850 -----VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
                             L     Y I V  +   G G   +          P++ 
Sbjct: 445 TDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPG-SPESIKAYLKQAPPSKG 499

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score =  132 bits (334), Expect = 2e-32
 Identities = 61/445 (13%), Positives = 122/445 (27%), Gaps = 72/445 (16%)

Query: 485 PRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQD-QSLPMSAWETQVVDNNQLTTI 543
           P    V+  S+ T V    E       +    + +  +  ++P   +       + +T  
Sbjct: 10  PESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFT 69

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKP 603
              + +   T  +  F  +        ++       P +P++L  +  +   +   W   
Sbjct: 70  DIASLNIQLTCNILTFGQLEQNVYGITIIS---GLPPEKPKNLSCIVNEGKKMRCEWDGG 126

Query: 604 THSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 663
             +     ++ L                                          W     
Sbjct: 127 RETHL-ETNFTLKSE---------------------------------------WATHKF 146

Query: 664 KAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNV 723
                +R                   +W+ A++  G+  T+  I       V   PP N+
Sbjct: 147 ADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKV-TSDHINFDPVYKVKPNPPHNL 205

Query: 724 SCEPLS--STSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE--ASIVTLKNQTSFVL 779
           S       S+ ++++W  P     +  I+ Y +Q+     S         T   ++SF +
Sbjct: 206 SVINSEELSSILKLTWTNP--SIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTV 263

Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSYP---ITIRTHEDDPSEVCPTQNDFRKNKKTNGSN 836
            +LK +TEY   +      G G  S      +  T+ED PS+          +       
Sbjct: 264 QDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRT 323

Query: 837 FK------------GGYLNDPMRFDVSDGGALELNV-----TGLQPDTIYTIQVAALTRK 879
            +            G  L+  +             V     T    +  Y   +      
Sbjct: 324 VQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLTVNLTNDRYLATLTVRNLV 383

Query: 880 GDGDRSKPETIKTPGGVPNRPHVNL 904
           G  D +   TI         P ++L
Sbjct: 384 GKSDAA-VLTIPACDFQATHPVMDL 407

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score =  104 bits (261), Expect = 2e-23
 Identities = 35/192 (18%), Positives = 66/192 (34%), Gaps = 20/192 (10%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS----EISGIITTYYT 256
              P+    +      + ++WT P E++  Y++++   +   P      +  G +   Y 
Sbjct: 400 ATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYL 459

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWD 316
             NL+    Y   +  V   G G P S       +  P      V+ + +  +  V++WD
Sbjct: 460 RGNLAESKCYLITVTPVYADGPGSPESIKA-YLKQAPPS-KGPTVRTKKVGKNEAVLEWD 517

Query: 317 EP--ETPNGQIT------------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362
           +   +  NG I                         Y+L+ L  +TLY + +AA +  G 
Sbjct: 518 QLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGG 577

Query: 363 GATTPPIPVRTK 374
                      K
Sbjct: 578 KDGPEFTFTTPK 589

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score = 82.4 bits (203), Expect = 2e-16
 Identities = 68/516 (13%), Positives = 114/516 (22%), Gaps = 132/516 (25%)

Query: 28  ILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI----------------------- 64
           I+   P   P+++         M  +WD     + +                        
Sbjct: 97  IISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTP 156

Query: 65  -----THPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVML 119
                 +           + A++ L +     +     DPV +V P     PP  L V  
Sbjct: 157 TSCTVDYSTVYFVNIEVWVEAENALGKVT---SDHINFDPVYKVKPN----PPHNLSV-- 207

Query: 120 DSPLNLSCVAVGSPMPFVKWRKGQ---------NIELTPDDK----------LPVGRNVL 160
                       S +  + W             NI+    D               R+  
Sbjct: 208 ------INSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSF 261

Query: 161 TLDRVTESENYTC--IAASVLGVIETS-----TIVKVQCKYAPLLTLPVAPLDVKISEVT 213
           T+  +     Y          G    S               P                 
Sbjct: 262 TVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED-RPSKAPSFWYKIDPSHTQG 320

Query: 214 ATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEF 268
             +V+L W           +L Y +           S +         +        Y  
Sbjct: 321 YRTVQLVWKTLPPFEANGKILDYEVTLTRWK-----SHLQNYTVNATKLTVNLTNDRYLA 375

Query: 269 YIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG----- 323
            +   N +G+   +   +         T P          + + ++W  P          
Sbjct: 376 TLTVRNLVGKSDAAV--LTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILE 433

Query: 324 ---------QITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG----------- 363
                     IT        +  TY    L  +  Y I +      G G           
Sbjct: 434 WCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQ 493

Query: 364 -ATTPPIPVRTKQYGKT--------------PGF----------GEQAAKHHRRIGLVET 398
              +    VRTK+ GK                GF                          
Sbjct: 494 APPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTE 553

Query: 399 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 434
           Y+L+ L  +TLY + +AA +  G            K
Sbjct: 554 YTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 589

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score =  210 bits (535), Expect = 1e-60
 Identities = 80/434 (18%), Positives = 143/434 (32%), Gaps = 73/434 (16%)

Query: 481 PGTAPRDVQVRPLSSSTMV-IQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           P + P ++ +     + ++ + W+   TP+  ITGY++  T       ++ E  V  +  
Sbjct: 2   PLSPPTNLHLEANPDTGVLTVSWERSTTPD--ITGYRITTTPTNGQQGNSLEEVVHADQS 59

Query: 540 LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLA 599
             T  +L+P   Y + V     V     S P+       VP Q  DL  VDI ++++ L 
Sbjct: 60  SCTFDNLSPGLEYNVSVYT---VKDDKESVPISDTIIPEVP-QLTDLSFVDITDSSIGLR 115

Query: 600 WSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 659
           W+    S   II Y +                                G  I    +  +
Sbjct: 116 WTPLNSS--TIIGYRITV-------------------------VAAGEGIPIFEDFVDSS 148

Query: 660 DTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
                            Y++TGL P   Y I +      GE A     P    Q     P
Sbjct: 149 VG--------------YYTVTGLEPGIDYDISVITLINGGESA-----PTTLTQQTAVPP 189

Query: 720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVL 779
           P ++    +   ++R++W PPP    +  +  + +++      +  A +    +  + VL
Sbjct: 190 PTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVL 245

Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKN------KKTN 833
             L   TEY + V +   + +   S P+  R      S      +D   N          
Sbjct: 246 TNLLPGTEYVVSVSS---VYEQHESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPR 302

Query: 834 GS------NFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKP 887
            +           + +   R D        + +T L P T Y + + AL  + +      
Sbjct: 303 ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLL-I 361

Query: 888 ETIKTPGGVPNRPH 901
               T     +  H
Sbjct: 362 GQQSTVSAHHHHHH 375

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score =  184 bits (468), Expect = 2e-51
 Identities = 60/359 (16%), Positives = 115/359 (32%), Gaps = 63/359 (17%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           L P   Y + +       E     PI        P     D+    ++ S++ ++W    
Sbjct: 66  LSPGLEYNVSVYTVKDDKES---VPISDTIIPEVP--QLTDLSFVDITDSSIGLRWTPL- 119

Query: 507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGP 566
             +  I GY++         +  +E  V  +    T++ L P   Y I V    + G   
Sbjct: 120 -NSSTIIGYRITVVAAGE-GIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESA 177

Query: 567 LSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRD 626
            +      TQQ     P DLR  +I    + + W+ P     ++ ++ + +         
Sbjct: 178 PTTL----TQQTAVPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRY--------- 222

Query: 627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNT 686
                            P  + E++    +  +D                  LT L P T
Sbjct: 223 ----------------SPVKNEEDVAELSISPSDN--------------AVVLTNLLPGT 252

Query: 687 LYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSN 746
            Y + +++   + E       P+R +Q      P  +    +++ S  + W  P      
Sbjct: 253 EYVVSVSSVYEQHEST-----PLRGRQKTGLDSPTGIDFSDITANSFTVHWIAP-----R 302

Query: 747 GHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSY 805
             I  Y+++      S          ++ S  L  L   TEY + ++A     + P   
Sbjct: 303 ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI 361

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score =  167 bits (424), Expect = 1e-45
 Identities = 81/524 (15%), Positives = 136/524 (25%), Gaps = 158/524 (30%)

Query: 203 APLDVKISEVTATS-VRLDWTYPSE-TLLYYVIQYKPKAANT--PYSEISGIITTYYTVR 258
            P ++ +     T  + + W   +   +  Y I   P          E+     +  T  
Sbjct: 5   PPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFD 64

Query: 259 NLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP 318
           NLSP  EY   +  V +      S P   T     P     D+    ++ S++ ++W   
Sbjct: 65  NLSPGLEYNVSVYTVKD---DKESVPISDTIIPEVP--QLTDLSFVDITDSSIGLRWTPL 119

Query: 319 ETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGK 378
              +  I                        Y I +      GEG       V +     
Sbjct: 120 --NSSTIIG----------------------YRITV---VAAGEGIPIFEDFVDSSVG-- 150

Query: 379 TPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGK 438
                               Y++TGL P   Y I +      GE A              
Sbjct: 151 -------------------YYTVTGLEPGIDYDISVITLINGGESA-------------- 177

Query: 439 TPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTM 498
                                             P    Q      P D++   +   TM
Sbjct: 178 ----------------------------------PTTLTQQTAVPPPTDLRFTNIGPDTM 203

Query: 499 VIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQA 558
            + W  P  P+  +T + V Y+  ++    A  +    +N    +++L P T Y + V +
Sbjct: 204 RVTWAPP--PSIDLTNFLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYVVSVSS 260

Query: 559 FTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 618
                          KT       P  +   DI   + T+ W  P      I  Y +   
Sbjct: 261 VYEQHEST-PLRGRQKT---GLDSPTGIDFSDITANSFTVHWIAPRA---TITGYRIRH- 312

Query: 619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYS 678
                                    P H         +  +                + +
Sbjct: 313 ------------------------HPEHFSGRPREDRVPHSRN--------------SIT 334

Query: 679 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
           LT L P T Y + + A + R E    P +  +    V      +
Sbjct: 335 LTNLTPGTEYVVSIVALNGREES---PLLIGQQST-VSAHHHHH 374

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score =  142 bits (360), Expect = 5e-37
 Identities = 62/373 (16%), Positives = 112/373 (30%), Gaps = 107/373 (28%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEIS-GIITTYY 255
           +       D+   ++T +S+ L WT   S T++ Y I         P  E        YY
Sbjct: 93  IPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYY 152

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQW 315
           TV  L P  +Y+  +I + N G   P++    T         P D++   +   TM + W
Sbjct: 153 TVTGLEPGIDYDISVITLINGGESAPTTLTQQT-----AVPPPTDLRFTNIGPDTMRVTW 207

Query: 316 DEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
             P  P+  +T                       + +     SP         + +    
Sbjct: 208 APP--PSIDLTN----------------------FLVRY---SPVKNEEDVAELSISPSD 240

Query: 376 YGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 435
                                    LT L P T Y + +++   + E             
Sbjct: 241 ---------------------NAVVLTNLLPGTEYVVSVSSVYEQHEST----------- 268

Query: 436 YGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSS 495
                                                P+R +Q     +P  +    +++
Sbjct: 269 -------------------------------------PLRGRQKTGLDSPTGIDFSDITA 291

Query: 496 STMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIR 555
           ++  + W     P   ITGY++ +   +       E +V  +    T+++LTP T Y + 
Sbjct: 292 NSFTVHWIA---PRATITGYRIRH-HPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVS 347

Query: 556 VQAFTSVGPGPLS 568
           + A       PL 
Sbjct: 348 IVALNGREESPLL 360

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score =  110 bits (277), Expect = 3e-26
 Identities = 59/387 (15%), Positives = 124/387 (32%), Gaps = 66/387 (17%)

Query: 33  PGTAPRDVQVRPLSSSTMV-IQWDEPETPN------------GQITHPPTRAARSHARLA 79
           P + P ++ +     + ++ + W+   TP+            GQ  +       +     
Sbjct: 2   PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSC 61

Query: 80  AQSVLRRGRLAH-AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVK 138
               L  G   + +V  V D    VP   +I P            +LS V +      ++
Sbjct: 62  TFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEV------PQLTDLSFVDITDSSIGLR 115

Query: 139 WRKGQN-------IELTPDDK--------LPVGRNVLTLDRVTESENYTCIAASVLGVIE 183
           W    +       I +    +        +       T+  +    +Y     +++   E
Sbjct: 116 WTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGE 175

Query: 184 TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET-LLYYVIQYKPKAANT 242
           ++     Q       T    P D++ + +   ++R+ W  P    L  ++++Y P     
Sbjct: 176 SAPTTLTQQ------TAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEE 229

Query: 243 PYSEISGIIT-TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDV 301
             +E+S   +     + NL P TEY   + +V       P         +T    +P  +
Sbjct: 230 DVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR----GRQKTGLD-SPTGI 284

Query: 302 QVRPLSSSTMVIQWDEPETP-----------NGQITAKHHRRIGLVETYSLTGLYPNTLY 350
               +++++  + W  P              +     +  R      + +LT L P T Y
Sbjct: 285 DFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEY 344

Query: 351 YIWLAAQSPRGEG-------ATTPPIP 370
            + + A + R E        +T     
Sbjct: 345 VVSIVALNGREESPLLIGQQSTVSAHH 371

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 92.2 bits (229), Expect = 5e-20
 Identities = 44/202 (21%), Positives = 66/202 (32%), Gaps = 28/202 (13%)

Query: 715 VPGAPPQNVSCEPLSSTS-IRISWEPPPVERSNGHIVYYKLQFVET-GRSDSEASIVTLK 772
           +P +PP N+  E    T  + +SWE          I  Y++    T G+  +    V   
Sbjct: 1   MPLSPPTNLHLEANPDTGVLTVSWERST----TPDITGYRITTTPTNGQQGNSLEEVVHA 56

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKT 832
           +Q+S   D L    EY + V     + D   S PI+     + P     T   F     +
Sbjct: 57  DQSSCTFDNLSPGLEYNVSVYT---VKDDKESVPISDTIIPEVPQ---LTDLSFVDITDS 110

Query: 833 ---------NGSNFKGGYL-------NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAAL 876
                    N S   G  +         P+  D  D       VTGL+P   Y I V  L
Sbjct: 111 SIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITL 170

Query: 877 TRKGDGDRSKPETIKTPGGVPN 898
              G+   +            +
Sbjct: 171 INGGESAPTTLTQQTAVPPPTD 192

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 84.5 bits (209), Expect = 2e-17
 Identities = 50/301 (16%), Positives = 88/301 (29%), Gaps = 54/301 (17%)

Query: 25  PGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITH-------------PPTRA 71
           P    +        D+    ++ S++ ++W      +  I                    
Sbjct: 87  PISDTIIPEVPQLTDLSFVDITDSSIGLRWTPL--NSSTIIGYRITVVAAGEGIPIFEDF 144

Query: 72  ARSHARLAAQSVLRRGRL------AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNL 125
             S       + L  G               + P            P         P +L
Sbjct: 145 VDSSVGYYTVTGLEPGIDYDISVITLINGGESAPT---TLTQQTAVPP--------PTDL 193

Query: 126 SCVAVGS--------PMP-------FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESEN 170
               +G         P P        V++   +N E   +  +    N + L  +     
Sbjct: 194 RFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTE 253

Query: 171 YTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLY 230
           Y    +SV    E++ +   Q       T   +P  +  S++TA S  + W  P  T+  
Sbjct: 254 YVVSVSSVYEQHESTPLRGRQK------TGLDSPTGIDFSDITANSFTVHWIAPRATITG 307

Query: 231 YVIQYKPKAANTPYSEIS-GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           Y I++ P+  +    E          T+ NL+P TEY   I+A+N     P       T 
Sbjct: 308 YRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTV 367

Query: 290 G 290
            
Sbjct: 368 S 368

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score =  218 bits (555), Expect = 3e-60
 Identities = 81/463 (17%), Positives = 147/463 (31%), Gaps = 85/463 (18%)

Query: 447 LYPNTLYYIWLAAQSP--RGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE 504
           L P+T Y I +    P   G G+  P +  RTK  +P   PR ++V  + S  + I+W+ 
Sbjct: 323 LDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEP 382

Query: 505 PETP--NGQITGYKVYYTQDQSLPMSAWETQVVD---NNQLTTISDLTPHTIYTIRVQAF 559
                         V+Y           E    D   ++   TI++L+P+T  ++++   
Sbjct: 383 FGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILM 442

Query: 560 TSVGPGPLSAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 618
              G    S  ++V+T + +P   P +       E  + L W +PT +   I  YE+ + 
Sbjct: 443 NPEGRKE-SQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITY- 500

Query: 619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYS 678
                                   K   S +          D   ++    ++G    + 
Sbjct: 501 ------------------------KAVSSFDP-------EIDLSNQSGRVSKLGNETHFL 529

Query: 679 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSC-EPLSSTSIRISW 737
             GLYP T Y   + A + +G G         TK   P  P   +      +  ++ +  
Sbjct: 530 FFGLYPGTTYSFTIRASTAKGFGPPATNQ-FTTKISAPSMPAYELETPLNQTDNTVTVML 588

Query: 738 EPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTS 797
           +P         +  Y++   E     ++ +   LK     +  +       + +  A   
Sbjct: 589 KPA--HSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFP 646

Query: 798 IGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALE 857
                ++ P TI  ++                          GY N P            
Sbjct: 647 ADSLQAAQPFTIGDNKTY-----------------------NGYWNTP------------ 671

Query: 858 LNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
                L P   Y I   A +R     +     + T G    +P
Sbjct: 672 -----LLPYKSYRIYFQAASRANGETKIDCVQVATKGAATPKP 709

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score =  216 bits (551), Expect = 1e-59
 Identities = 93/584 (15%), Positives = 176/584 (30%), Gaps = 101/584 (17%)

Query: 85  RRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKG-Q 143
            +G LA    +V        P F       +EV         C A+G  +   +      
Sbjct: 146 HQGYLAIDEVKVLGHPCTRTPHF--LRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGI 203

Query: 144 NIELTPDDKLPVGRNV-----LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           ++   P  ++ V  +        +   T+ +   Y C+  +  GV  ++    V  +   
Sbjct: 204 DVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKE--- 260

Query: 197 LLTLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIIT 252
               PV     +++ V AT + +     S      ++   ++Y    A+  +++   + +
Sbjct: 261 ---PPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCT--ASGSWNDRQPVDS 315

Query: 253 TYYTVRNLSPYTEYEFYIIAVNN--LGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSST 310
           T Y + +L P TEYE  ++       G G P       T   +P   PR ++V  + S  
Sbjct: 316 TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQ 375

Query: 311 MVIQWDEPETPNGQITAKH--------------------HRRIGLVETYSLTGLYPNTLY 350
           + I+W+       +  + +                             +++T L P T  
Sbjct: 376 ITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNV 435

Query: 351 YIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLT-----GLY 405
            + L   +P G    +  + V+T +    PG    A       G      +         
Sbjct: 436 SVKLILMNPEGRKE-SQELIVQTDE--DLPG----AVPTESIQGSTFEEKIFLQWREPTQ 488

Query: 406 PN---TLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSP 462
                TLY I   A S             R  + G    F    LYP T Y   + A + 
Sbjct: 489 TYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTA 548

Query: 463 RGEGATTPPIPVRTKQYEPGTAPRDVQVR-PLSSSTMVIQWDEPETPNGQITGYKVYYTQ 521
           +G G         TK   P     +++     + +T+ +      +    ++ Y++   +
Sbjct: 549 KGFGPPATNQ-FTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEE 607

Query: 522 DQSLPMSAWETQ--------------------------------------VVDNNQLT-- 541
           ++                                                + DN      
Sbjct: 608 ERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGY 667

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRD 585
             + L P+  Y I  QA +          V V T+     +P  
Sbjct: 668 WNTPLLPYKSYRIYFQAASRANGETKIDCVQVATKGAATPKPVP 711

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score =  201 bits (511), Expect = 2e-54
 Identities = 104/655 (15%), Positives = 192/655 (29%), Gaps = 65/655 (9%)

Query: 123 LNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGV 181
           LN+       P+    W   G         +L +               Y  I   +   
Sbjct: 94  LNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAI--------STFWPNFYQVIFEVITSG 145

Query: 182 IETS-TIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA 240
            +    I +V+    P    P       +            +    T+    +  +    
Sbjct: 146 HQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDV 205

Query: 241 NTPYSEISGIITT-----YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPG 295
                +   + ++      + V N +     ++  +     G G  +   ++     EP 
Sbjct: 206 RDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVK---EPP 262

Query: 296 TAPRDVQVRPLSSSTMVIQWDEPE-TPNGQIT-----------AKHHRRIGLVETYSLTG 343
                 Q+  + ++ + IQ +      +G I            + + R+     +Y +  
Sbjct: 263 VPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGH 322

Query: 344 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLT- 402
           L P+T Y I +    P   G  +P   +RT+     P            +  V++  +T 
Sbjct: 323 LDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPM----RGPRKLEVVEVKSRQITI 378

Query: 403 ---------GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLY 453
                        +    +       +  G       V        P      L P T  
Sbjct: 379 RWEPFGYNVTRCHSYNLTVH---YCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNV 435

Query: 454 YIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT 513
            + L   +P G   +   + V+T +  PG  P +          + +QW EP    G IT
Sbjct: 436 SVKLILMNPEGRKES-QELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVIT 494

Query: 514 GYKVYY------TQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPL 567
            Y++ Y        +  L   +     + N        L P T Y+  ++A T+ G GP 
Sbjct: 495 LYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGP- 553

Query: 568 SAPVLVKTQQGVPSQPRDLRAVDIQETA--VTLAWSKPTHSGENIISYELYWNDTYAKPR 625
            A     T+   PS P       + +T   VT+        G  +  Y++   +   +PR
Sbjct: 554 PATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEE--RPR 611

Query: 626 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR-RIGLVETYSL---TG 681
             +          +       S  N   Y        +        IG  +TY+    T 
Sbjct: 612 RTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTP 671

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRIS 736
           L P   Y I+  A S          + V TK      P      E  +  +++ +
Sbjct: 672 LLPYKSYRIYFQAASRANGETKIDCVQVATKGAATPKPVPEP--EKQTDHTVKGT 724

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score =  193 bits (490), Expect = 1e-51
 Identities = 72/397 (18%), Positives = 125/397 (31%), Gaps = 55/397 (13%)

Query: 432 RTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVR 491
            T        F                 ++  G G +     V     EP       Q+ 
Sbjct: 215 VTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVK---EPPVPIAPPQLA 271

Query: 492 PLSSSTMVIQWDEPE-TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHT 550
            + ++ + IQ +      +G I   +V Y         +W  +   ++    I  L P T
Sbjct: 272 SVGATYLWIQLNANSINGDGPIVAREVEYCTASG----SWNDRQPVDSTSYKIGHLDPDT 327

Query: 551 IYTIRVQAFT--SVGPGPLSAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAWSKPTHSG 607
            Y I V        G G     +  +T+   P + PR L  V+++   +T+ W    ++ 
Sbjct: 328 EYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNV 387

Query: 608 ENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH 667
               SY L                       + +       E +     +  +       
Sbjct: 388 TRCHSYNLT----------------------VHYCYQVGGQEQVREEVSWDTENS----- 420

Query: 668 HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEP 727
                    +++T L P T   + L   +P G    +  + V+T + +PGA P       
Sbjct: 421 ------HPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPTESIQGS 473

Query: 728 LSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA-------SIVTLKNQTSFVLD 780
                I + W  P   ++ G I  Y++ +      D E         +  L N+T F+  
Sbjct: 474 TFEEKIFLQWREPT--QTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFF 531

Query: 781 ELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
            L   T Y   + A T+ G GP +      T    PS
Sbjct: 532 GLYPGTTYSFTIRASTAKGFGPPA-TNQFTTKISAPS 567

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score =  172 bits (437), Expect = 7e-45
 Identities = 71/486 (14%), Positives = 124/486 (25%), Gaps = 77/486 (15%)

Query: 450 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN 509
                  +     +G  A      +           R   V   +      Q        
Sbjct: 134 FYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTV 193

Query: 510 GQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSA 569
                +        +       T          + + T       R    T  G G  + 
Sbjct: 194 AGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNY 253

Query: 570 PVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKPRDLR 628
             LV  +  VP  P   +   +  T + +  +  + +G+  I++ E+ +        D +
Sbjct: 254 AELVVKEPPVPIAP--PQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQ 311

Query: 629 AVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLY 688
            VD                                            +Y +  L P+T Y
Sbjct: 312 PVD------------------------------------------STSYKIGHLDPDTEY 329

Query: 689 YIWLAAQSP--RGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSN 746
            I +    P   G G+  P +  RTK   P   P+ +    + S  I I WEP     + 
Sbjct: 330 EISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTR 389

Query: 747 GHIVYYKLQFVETGRSDSEASIVTLK----NQTSFVLDELKKWTEYRIWVLAGTSIGDGP 802
            H     + +        +           +     +  L  +T   + ++     G   
Sbjct: 390 CHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE 449

Query: 803 SSYPITIRTHEDDPSEVCPTQNDFRKNKKT------------------------NGSNFK 838
           S   + ++T ED P  V          ++                           S   
Sbjct: 450 SQ-ELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDP 508

Query: 839 GGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPN 898
              L++        G        GL P T Y+  + A T KG G  +      T    P+
Sbjct: 509 EIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPA-TNQFTTKISAPS 567

Query: 899 RPHVNL 904
            P   L
Sbjct: 568 MPAYEL 573

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score =  199 bits (508), Expect = 5e-57
 Identities = 76/427 (17%), Positives = 140/427 (32%), Gaps = 76/427 (17%)

Query: 481 PGTAPRDVQVRPLS-SSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           P + P ++ +     +  + + W+   TP+  ITGY++  T       ++ E  V  +  
Sbjct: 1   PLSPPTNLHLEANPDTGVLTVSWERSTTPD--ITGYRITTTPTNGQQGNSLEEVVHADQS 58

Query: 540 LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLA 599
             T  +L+P   Y + V     V     S P+       VP  P DLR  +I    + + 
Sbjct: 59  SCTFDNLSPGLEYNVSVYT---VKDDKESVPISDTIIPAVPP-PTDLRFTNIGPDTMRVT 114

Query: 600 WSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 659
           W+ P     ++ ++ + +                          P  + E++    +  +
Sbjct: 115 WAPP--PSIDLTNFLVRY-------------------------SPVKNEEDVAELSISPS 147

Query: 660 DTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
           D                  LT L P T Y + +++   + E       P+R +Q      
Sbjct: 148 DN--------------AVVLTNLLPGTEYVVSVSSVYEQHEST-----PLRGRQKTGLDS 188

Query: 720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVL 779
           P  +    +++ S  + W  P        I  Y+++      S          ++ S  L
Sbjct: 189 PTGIDFSDITANSFTVHWIAP-----RATITGYRIRHHPEHFSGRPREDRVPHSRNSITL 243

Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVC-PTQNDFRKN------KKT 832
             L   TEY + ++A     + P      I                              
Sbjct: 244 TNLTPGTEYVVSIVALNGREESPLL----IGQQSTVSDVPRDLEVVAATPTSLLISWDAP 299

Query: 833 NGS------NFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGD-RS 885
             +       +     N P++     G      ++GL+P   YTI V A+T +GD    S
Sbjct: 300 AVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASS 359

Query: 886 KPETIKT 892
           KP +I  
Sbjct: 360 KPISINY 366

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score =  184 bits (468), Expect = 1e-51
 Identities = 74/366 (20%), Positives = 127/366 (34%), Gaps = 65/366 (17%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           L P   Y + +       E     PI        P   P D++   +   TM + W  P 
Sbjct: 65  LSPGLEYNVSVYTVKDDKES---VPISDTIIPAVP--PPTDLRFTNIGPDTMRVTWAPP- 118

Query: 507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGP 566
            P+  +T + V Y+  ++    A  +    +N    +++L P T Y + V +        
Sbjct: 119 -PSIDLTNFLVRYSPVKNEEDVAELSISPSDNA-VVLTNLLPGTEYVVSVSSVYEQHEST 176

Query: 567 LSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRD 626
                L   Q+     P  +   DI   + T+ W  P  +   I  Y +           
Sbjct: 177 ----PLRGRQKTGLDSPTGIDFSDITANSFTVHWIAPRAT---ITGYRIRH--------- 220

Query: 627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNT 686
                            P H         +  +                + +LT L P T
Sbjct: 221 ----------------HPEHFSGRPREDRVPHSRN--------------SITLTNLTPGT 250

Query: 687 LYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSN 746
            Y + + A + R E     P+ +  +  V    P+++     + TS+ ISW+ P      
Sbjct: 251 EYVVSIVALNGREES----PLLIGQQSTVSD-VPRDLEVVAATPTSLLISWDAP-----A 300

Query: 747 GHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGP-SSY 805
             + YY++ + ETG +          ++++  +  LK   +Y I V A T  GD P SS 
Sbjct: 301 VTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSK 360

Query: 806 PITIRT 811
           PI+I  
Sbjct: 361 PISINY 366

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score =  159 bits (405), Expect = 4e-43
 Identities = 77/405 (19%), Positives = 127/405 (31%), Gaps = 68/405 (16%)

Query: 201 PVAPLDVKISEVTATS-VRLDWTYPSE-TLLYYVIQYKPKAA--NTPYSEISGIITTYYT 256
              P ++ +     T  + + W   +   +  Y I   P          E+     +  T
Sbjct: 2   LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCT 61

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWD 316
             NLSP  EY   +  V +     P S    T     P   P D++   +   TM + W 
Sbjct: 62  FDNLSPGLEYNVSVYTVKDDKESVPIS---DTIIPAVP--PPTDLRFTNIGPDTMRVTWA 116

Query: 317 EPETPNGQIT--------------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362
            P  P+  +T                            LT L P T Y + +++   + E
Sbjct: 117 PP--PSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHE 174

Query: 363 GATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 422
                  P+R +Q                          + +  N+    W    +PR  
Sbjct: 175 ST-----PLRGRQKTGLDS--------------PTGIDFSDITANSFTVHW---IAPRAT 212

Query: 423 --------GATTPPIPVRTKQYGKTPGFGE-QALYPNTLYYIWLAAQSPRGEGATTPPIP 473
                            R  +   +        L P T Y + + A + R E        
Sbjct: 213 ITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESP-----L 267

Query: 474 VRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ 533
           +  +Q      PRD++V   + ++++I WD    P   +  Y++ Y  +        E  
Sbjct: 268 LIGQQSTVSDVPRDLEVVAATPTSLLISWDA---PAVTVRYYRITY-GETGGNSPVQEFT 323

Query: 534 VVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAP---VLVKT 575
           V  +    TIS L P   YTI V A T  G  P S+    +  +T
Sbjct: 324 VPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISINYRT 368

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score =  148 bits (375), Expect = 4e-39
 Identities = 69/441 (15%), Positives = 135/441 (30%), Gaps = 96/441 (21%)

Query: 294 PGTAPRDVQVRPLS-SSTMVIQWDEPETPN------------GQITAKHHRRIGLVET-Y 339
           P + P ++ +     +  + + W+   TP+            GQ        +   ++  
Sbjct: 1   PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSC 60

Query: 340 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETY 399
           +   L P   Y + +       E     PI          P              L    
Sbjct: 61  TFDNLSPGLEYNVSVYTVKDDKES---VPISDTIIPAVPPPT------------DL---- 101

Query: 400 SLTGLYPNTLYYIWLAAQSPRGEG-------ATTPPIPVRTKQYGKTPGFGEQALYPNTL 452
             T + P+T+   W    S                                   L P T 
Sbjct: 102 RFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTE 161

Query: 453 YYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI 512
           Y + +++   + E       P+R +Q     +P  +    +++++  + W  P      I
Sbjct: 162 YVVSVSSVYEQHEST-----PLRGRQKTGLDSPTGIDFSDITANSFTVHWIAP---RATI 213

Query: 513 TGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVL 572
           TGY++ +  +        +      N   T+++LTP T Y + + A       PL     
Sbjct: 214 TGYRIRHHPEHFSGRPREDRVPHSRNS-ITLTNLTPGTEYVVSIVALNGREESPLL---- 268

Query: 573 VKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDI 632
           +  Q  V   PRDL  V    T++ ++W  P      +  Y + +               
Sbjct: 269 IGQQSTVSDVPRDLEVVAATPTSLLISWDAP---AVTVRYYRITY--------------- 310

Query: 633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWL 692
                       T     +  + +  + +              T +++GL P   Y I +
Sbjct: 311 ----------GETGGNSPVQEFTVPGSKS--------------TATISGLKPGVDYTITV 346

Query: 693 AAQSPRGEG-ATTPPIPVRTK 712
            A + RG+  A++ PI +  +
Sbjct: 347 YAVTGRGDSPASSKPISINYR 367

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score =  127 bits (320), Expect = 8e-32
 Identities = 47/289 (16%), Positives = 96/289 (33%), Gaps = 26/289 (8%)

Query: 624 PRDLRAVDIQET-AVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET---YSL 679
           P +L      +T  +T++W + T    +I  Y +    T  +  +     +       + 
Sbjct: 5   PTNLHLEANPDTGVLTVSWERST--TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTF 62

Query: 680 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEP 739
             L P   Y + +       E     PI       VP  PP ++    +   ++R++W P
Sbjct: 63  DNLSPGLEYNVSVYTVKDDKES---VPISDTIIPAVP--PPTDLRFTNIGPDTMRVTWAP 117

Query: 740 PPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIG 799
           PP    +  +  + +++      +  A +    +  + VL  L   TEY + V +     
Sbjct: 118 PP----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQH 173

Query: 800 DGPSSYPITIRTHEDDPSEV---CPTQNDFRKN-KKTNGS------NFKGGYLNDPMRFD 849
           +         +T  D P+ +     T N F  +      +           + +   R D
Sbjct: 174 ESTPLRGRQ-KTGLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED 232

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPN 898
                   + +T L P T Y + + AL  + +      +         +
Sbjct: 233 RVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDVPRD 281

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score =  120 bits (303), Expect = 1e-29
 Identities = 78/384 (20%), Positives = 137/384 (35%), Gaps = 59/384 (15%)

Query: 33  PGTAPRDVQVRPLS-SSTMVIQWDEPETPN------------GQITHPPTRAARSHARLA 79
           P + P ++ +     +  + + W+   TP+            GQ  +       +     
Sbjct: 1   PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSC 60

Query: 80  AQSVLRRGRLAH-AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVK 138
               L  G   + +V  V D    VP   +I P          P +L    +G     V 
Sbjct: 61  TFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAV------PPPTDLRFTNIGPDTMRVT 114

Query: 139 WRKGQNIELT---------------PDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIE 183
           W    +I+LT                +  +    N + L  +     Y    +SV    E
Sbjct: 115 WAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHE 174

Query: 184 TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTP 243
           ++ +   Q       T   +P  +  S++TA S  + W  P  T+  Y I++ P+  +  
Sbjct: 175 STPLRGRQ------KTGLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGR 228

Query: 244 YSEISGIIT-TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQ 302
             E     +    T+ NL+P TEY   I+A+N     P           T     PRD++
Sbjct: 229 PREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI----GQQSTVSD-VPRDLE 283

Query: 303 VRPLSSSTMVIQWDEPE-----------TPNGQITAKHHRRIGLVETYSLTGLYPNTLYY 351
           V   + ++++I WD P               G    +     G   T +++GL P   Y 
Sbjct: 284 VVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYT 343

Query: 352 IWLAAQSPRGEG-ATTPPIPVRTK 374
           I + A + RG+  A++ PI +  +
Sbjct: 344 ITVYAVTGRGDSPASSKPISINYR 367

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 93.0 bits (231), Expect = 2e-20
 Identities = 56/297 (18%), Positives = 98/297 (32%), Gaps = 43/297 (14%)

Query: 25  PGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITHPPTRAARSHARLAAQSVL 84
           P    +      P D++   +   TM + W  P  P+  +T+   R +          + 
Sbjct: 86  PISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPP--PSIDLTNFLVRYSPVKNEEDVAELS 143

Query: 85  RRGRLAHA--------------VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAV 130
                                 V  V +     P +            LDSP  +    +
Sbjct: 144 ISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTG------LDSPTGIDFSDI 197

Query: 131 GS---------PMP-----FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAA 176
            +         P        ++           +D++P  RN +TL  +T    Y     
Sbjct: 198 TANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIV 257

Query: 177 SVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYK 236
           ++ G  E+  ++  Q       T+   P D+++   T TS+ + W  P+ T+ YY I Y 
Sbjct: 258 ALNGREESPLLIGQQS------TVSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYG 311

Query: 237 PKAANTPYSEIS-GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET 292
               N+P  E +     +  T+  L P  +Y   + AV   G  P SS  +     T
Sbjct: 312 ETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSKPISINYRT 368

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 85.7 bits (212), Expect = 6e-18
 Identities = 35/201 (17%), Positives = 60/201 (29%), Gaps = 28/201 (13%)

Query: 716 PGAPPQNVSCEPLSSTSI-RISWEPPPVERSNGHIVYYKLQFVET-GRSDSEASIVTLKN 773
           P +PP N+  E    T +  +SWE          I  Y++    T G+  +    V   +
Sbjct: 1   PLSPPTNLHLEANPDTGVLTVSWERST----TPDITGYRITTTPTNGQQGNSLEEVVHAD 56

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTN 833
           Q+S   D L    EY + V     + D   S PI+       P    PT   F       
Sbjct: 57  QSSCTFDNLSPGLEYNVSVYT---VKDDKESVPISDTIIPAVPP---PTDLRFTNIGPDT 110

Query: 834 ---------GSNFKG-------GYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALT 877
                      +              + +           + +T L P T Y + V+++ 
Sbjct: 111 MRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVY 170

Query: 878 RKGDGDRSKPETIKTPGGVPN 898
            + +    +            
Sbjct: 171 EQHESTPLRGRQKTGLDSPTG 191

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score =  187 bits (477), Expect = 1e-52
 Identities = 55/301 (18%), Positives = 106/301 (35%), Gaps = 42/301 (13%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV------ 155
              P+F             +P+N+SC    +P   + WR+   + L   +   +      
Sbjct: 98  EYAPKFISNQTIY-YSWEGNPINISCDVKSNPPASIHWRRD-KLVLPAKNTTNLKTYSTG 155

Query: 156 GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVT 213
            + +L +   ++++   Y C A + +G      I+ +         +P +P  VKI E++
Sbjct: 156 RKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALA-------DVPSSPYGVKIIELS 208

Query: 214 ATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFY 269
            T+ ++ +  P       + +Y +  K  A+       S  + T   + NL P T YE  
Sbjct: 209 QTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIR 268

Query: 270 IIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA-- 327
           + AVN  G+G  S   +  T      + P  +  +P S  +  +   + +     I    
Sbjct: 269 VAAVNGKGQGDYSKIEIFQTLPVREPSPP-SIHGQPSSGKSFKLSITKQDDGGAPILEYI 327

Query: 328 ------------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA------TTPPI 369
                          +  G  +   L  L     Y + + A +  G         + PP 
Sbjct: 328 VKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPK 387

Query: 370 P 370
           P
Sbjct: 388 P 388

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score =  139 bits (351), Expect = 1e-35
 Identities = 75/497 (15%), Positives = 136/497 (27%), Gaps = 132/497 (26%)

Query: 108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGR--------- 157
            I          +  + L C A G P+P + W++       T  DK   GR         
Sbjct: 3   HIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGS 62

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE---- 211
           + L +  V  S+   Y C AAS +G  + S  + ++  YAP                   
Sbjct: 63  SSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE--YAPKFISNQTIYYSWEGNPINI 120

Query: 212 -VTAT---SVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYE 267
                      + W      L        P    T     S        +   S      
Sbjct: 121 SCDVKSNPPASIHWRRDKLVL--------PAKNTTNLKTYSTGRKMILEIAPTSDNDFGR 172

Query: 268 FYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA 327
           +   A N++G    +          +  ++P  V++  LS +T  + +++P++  G    
Sbjct: 173 YNCTATNHIG----TRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGV--- 225

Query: 328 KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAA 387
                             P   Y +                         +      +  
Sbjct: 226 ------------------PIHHYQV----------------------DVKEVASEIWKIV 245

Query: 388 KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAL 447
           + H   G+     L  L PNT Y I +AA + +G+G  +     +T              
Sbjct: 246 RSH---GVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV----------- 291

Query: 448 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET 507
                                  P            +P  +  +P S  +  +   + + 
Sbjct: 292 ---------------------REP------------SPPSIHGQPSSGKSFKLSITKQDD 318

Query: 508 PNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGP 566
               I  Y V Y          W  + V  N+    +  L     Y +++ A   +G   
Sbjct: 319 GGAPILEYIVKYRSKDKE--DQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSE 376

Query: 567 LSAPVLVKTQQGVPSQP 583
            +       +  +P +P
Sbjct: 377 PTVY-----EFSMPPKP 388

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score =  123 bits (310), Expect = 2e-30
 Identities = 38/185 (20%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 624 PRDLRAVDIQETAVTLAWSKP-THSGENIISYELYWNDTYAKA-KHHRRIGLVETYSLTG 681
           P  ++ +++ +T   ++++KP +H G  I  Y++   +  ++  K  R  G+     L  
Sbjct: 199 PYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNN 258

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPP 741
           L PNT Y I +AA + +G+G  +     +T      +PP ++  +P S  S ++S     
Sbjct: 259 LEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPP-SIHGQPSSGKSFKLSITKQ- 316

Query: 742 VERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG 801
            +     I+ Y +++    + D         N+   +L+ L+    Y + + A   +G  
Sbjct: 317 -DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYS 375

Query: 802 PSSYP 806
             +  
Sbjct: 376 EPTVY 380

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score =  106 bits (265), Expect = 1e-24
 Identities = 40/238 (16%), Positives = 76/238 (31%), Gaps = 49/238 (20%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVVDNNQLT- 541
           +P  V++  LS +T  + +++P++  G  I  Y+V   +  S     W+       Q   
Sbjct: 198 SPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVAS---EIWKIVRSHGVQTMV 254

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWS 601
            +++L P+T Y IRV A    G G  S   + +T       P  +        +  L+ +
Sbjct: 255 VLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSIT 314

Query: 602 KPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT 661
           K    G  I+ Y + +                         +     +  +  ++  N  
Sbjct: 315 KQDDGGAPILEYIVKY-------------------------RSKDKEDQWLEKKVQGNKD 349

Query: 662 YAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
                            L  L     Y + + A +  G        P   +  +P  P
Sbjct: 350 --------------HIILEHLQWTMGYEVQITAANRLGYSE-----PTVYEFSMPPKP 388

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 92.9 bits (231), Expect = 3e-20
 Identities = 44/204 (21%), Positives = 64/204 (31%), Gaps = 29/204 (14%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASIVTLK 772
           VP   P  V    LS T+ ++S+  P    S+G   I +Y++   E      +       
Sbjct: 195 VPS-SPYGVKIIELSQTTAKVSFNKP---DSHGGVPIHHYQVDVKEVASEIWKIVRSHGV 250

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS-----EVCPTQNDF- 826
            QT  VL+ L+  T Y I V A    G G  S     +T              P+     
Sbjct: 251 -QTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSF 309

Query: 827 ----RKNKKTNGSNFKGGYL--------NDPMRFDVSDGGALELNVTGLQPDTIYTIQVA 874
                K            Y+         D        G    + +  LQ    Y +Q+ 
Sbjct: 310 KLSITKQDDGGAPIL--EYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQIT 367

Query: 875 ALTRKGDGDRSKPETIKTPGGVPN 898
           A  R G  + +  E    P   PN
Sbjct: 368 AANRLGYSEPTVYEFSMPP--KPN 389

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score =  195 bits (497), Expect = 6e-52
 Identities = 73/581 (12%), Positives = 150/581 (25%), Gaps = 116/581 (19%)

Query: 248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLS 307
            G +  +Y    L     ++   ++     +            +               S
Sbjct: 423 QGKLFFHYN-PKLCLSEIHKMEEVSGTKGRQERNDIALKTNGDQASCENELLKFSYIRTS 481

Query: 308 SSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTP 367
              ++++W+    P+ +                      + L ++    ++P        
Sbjct: 482 FDKILLRWEPYWPPDFR----------------------DLLGFMLFYKEAPYQNVTEFD 519

Query: 368 PIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTP 427
                                +  +      + + GL P T Y I++       +     
Sbjct: 520 GQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDE---- 575

Query: 428 PIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRD 487
                                              R  GA +  I V+T    P   P D
Sbjct: 576 ----------------------------------RRTYGAKSDIIYVQTDATNPS-VPLD 600

Query: 488 VQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLT 547
                 SSS ++++W  P  PNG IT Y V++ +             +   +L       
Sbjct: 601 PISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFELDYCLKGLKL------- 653

Query: 548 PHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSG 607
           P   ++   ++  S                  P     +   +++E++    +    H  
Sbjct: 654 PSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILK-ELEESSFRKTFEDYLH-- 710

Query: 608 ENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH 667
                     N  +                               S     N    +   
Sbjct: 711 ----------NVVFVPR----------------------PSRKRRSLGDVGNAGNNEEHR 738

Query: 668 HRRIGLVET-YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP----PQN 722
                + +    ++GL   T Y I L A +              + + +P A        
Sbjct: 739 PFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGP 798

Query: 723 VSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK--NQTSFVLD 780
           V+ E   +  + + W+ P  +  NG IV Y++ +   G  +            +    L 
Sbjct: 799 VTHEIFENNVVHLMWQEP--KEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLR 856

Query: 781 ELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE--DDPSEV 819
            L     Y + + A +  G+G  + P      +  D PS +
Sbjct: 857 GLSP-GNYSVRIRATSLAGNGSWTEPTYFYVTDYLDVPSNI 896

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score =  185 bits (471), Expect = 9e-49
 Identities = 65/441 (14%), Positives = 117/441 (26%), Gaps = 53/441 (12%)

Query: 190 VQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPK------- 238
                    +     L       +   + L W          LL +++ YK         
Sbjct: 458 ALKTNGDQASCENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTE 517

Query: 239 -----------------AANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG---- 277
                                  ++        + +R L P+T+Y  ++  +        
Sbjct: 518 FDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERR 577

Query: 278 -RGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT--------AK 328
             G  S    + T  T P   P D      SSS ++++W  P  PNG IT          
Sbjct: 578 TYGAKSDIIYVQTDATNPS-VPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQA 636

Query: 329 HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAK 388
               +  ++        P+  +     ++  +    +                       
Sbjct: 637 EDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKEL 696

Query: 389 HHRRIGLV-ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAL 447
                    E Y    ++         +       G      P                L
Sbjct: 697 EESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKV--VNKESLVISGL 754

Query: 448 YPNTLYYIWLAAQSPRGEGATTPPIP---VRTKQYE-PGTAPRDVQVRPLSSSTMVIQWD 503
              T Y I L A +                RT            V      ++ + + W 
Sbjct: 755 RHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQ 814

Query: 504 EPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSV 562
           EP+ PNG I  Y+V Y +     +   +T+     +    +  L+P   Y++R++A +  
Sbjct: 815 EPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSP-GNYSVRIRATSLA 873

Query: 563 GPGPLSAPVLVKTQQG--VPS 581
           G G  + P          VPS
Sbjct: 874 GNGSWTEPTYFYVTDYLDVPS 894

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score =  173 bits (438), Expect = 1e-44
 Identities = 71/502 (14%), Positives = 142/502 (28%), Gaps = 103/502 (20%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           L  + ++ +   + +   +      +     Q               S   ++++W+   
Sbjct: 434 LCLSEIHKMEEVSGTKGRQERNDIALKTNGDQASCENELLKFSYIRTSFDKILLRWEPYW 493

Query: 507 TPNG-QITGYKVYYTQDQSLPMS-----------AWETQVVD-----------NNQLTTI 543
            P+   + G+ ++Y +     ++           +W    +D           N+    +
Sbjct: 494 PPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLM 553

Query: 544 SDLTPHTIYTIRVQAFTSVG-----PGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTL 598
             L P T Y I V+   +        G  S  + V+T    PS P D  +V    + + L
Sbjct: 554 RGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIIL 613

Query: 599 AWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 658
            W  P+    NI  Y ++W                               E+   +EL +
Sbjct: 614 KWKPPSDPNGNITHYLVFW---------------------------ERQAEDSELFELDY 646

Query: 659 NDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA 718
                                    P+  +     ++  +    +            P  
Sbjct: 647 CLK------------------GLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKT 688

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSN----GHIVYYKLQFVETGRSDSEASIVTLKNQ 774
             Q +    L  +S R ++E                         G ++       + N+
Sbjct: 689 DSQILK--ELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNK 746

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCP------TQNDFRK 828
            S V+  L+ +T YRI + A                +    P           T   F  
Sbjct: 747 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFEN 806

Query: 829 N---------KKTNGS------NFKGGYLNDPMRFDVSDGGALELN--VTGLQPDTIYTI 871
           N         K+ NG       +++     +    D     ALE    + GL P   Y++
Sbjct: 807 NVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSP-GNYSV 865

Query: 872 QVAALTRKGDGDRSKPETIKTP 893
           ++ A +  G+G  ++P      
Sbjct: 866 RIRATSLAGNGSWTEPTYFYVT 887

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score =  125 bits (314), Expect = 2e-29
 Identities = 48/372 (12%), Positives = 98/372 (26%), Gaps = 67/372 (18%)

Query: 584 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK 643
             L   +I +              +  +           +      +      + L W  
Sbjct: 432 PKLCLSEIHKMEEVSGTKGRQERNDIALKTNGDQASCENELLKFSYIRTSFDKILLRWEP 491

Query: 644 PTHS-GENIISYELYW------NDTYAKAK-------------------HHRRIGLVETY 677
                  +++ + L++      N T    +                   +  +      +
Sbjct: 492 YWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGW 551

Query: 678 SLTGLYPNTLYYIWLAAQSPRGE-----GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTS 732
            + GL P T Y I++       +     GA +  I V+T    P   P +      SS+ 
Sbjct: 552 LMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPS-VPLDPISVSNSSSQ 610

Query: 733 IRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWV 792
           I + W+PP     NG+I +Y + +              L      +         +    
Sbjct: 611 IILKWKPP--SDPNGNITHYLVFWERQAEDS------ELFELDYCLKGLKLPSRTWSPPF 662

Query: 793 LAGTSIGDGPSSYPITIRTHEDDPSE------------------------VCPTQNDFRK 828
            +  S     S Y  +       P                          V   +   ++
Sbjct: 663 ESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKR 722

Query: 829 NKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPE 888
               +  N      + P    V+      L ++GL+  T Y I++ A  +    +R    
Sbjct: 723 RSLGDVGNAGNNEEHRPFEKVVNK---ESLVISGLRHFTGYRIELQACNQDTPEERCSVA 779

Query: 889 TIKTPGGVPNRP 900
              +   +P   
Sbjct: 780 AYVSARTMPEAK 791

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score =  116 bits (290), Expect = 1e-26
 Identities = 58/403 (14%), Positives = 102/403 (25%), Gaps = 71/403 (17%)

Query: 338 TYSLTGLYPNTLYYIWLAAQSPRGE-----GATTPPIPVRTKQYGKTPGFGEQAAKHHRR 392
            + + GL P T Y I++       +     GA +  I V+T      P            
Sbjct: 550 GWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDA--TNPS----------V 597

Query: 393 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGAT---TPPIPVRTKQYGKTPGFGEQALYP 449
                + S +    + +   W     P G                +  +     +    P
Sbjct: 598 PLDPISVSNS---SSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFELDYCLKGLKLP 654

Query: 450 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN 509
           +  +     ++  +    +            P T  + ++    SS     +        
Sbjct: 655 SRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVF 714

Query: 510 GQITGYKVYYTQDQSLPMSAWET---QVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGP 566
                 K     D     +  E    + V N +   IS L   T Y I +QA     P  
Sbjct: 715 VPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEE 774

Query: 567 LSAP-----VLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY 621
             +           +         +     +   V L W +P      I+ YE+ +    
Sbjct: 775 RCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSY---- 830

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTG 681
                 R    +E  +                                         L G
Sbjct: 831 ------RRYGDEELHLCDTRKHFALE---------------------------RGCRLRG 857

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVS 724
           L P   Y + + A S  G G+ T P       Y+    P N++
Sbjct: 858 LSPGN-YSVRIRATSLAGNGSWTEPTYFYVTDYLD--VPSNIA 897

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score = 91.9 bits (227), Expect = 4e-19
 Identities = 51/350 (14%), Positives = 96/350 (27%), Gaps = 58/350 (16%)

Query: 171 YTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE---T 227
               +         S I+ VQ         P  PLD      +++ + L W  PS+    
Sbjct: 569 LVTFSDERRTYGAKSDIIYVQTDATN----PSVPLDPISVSNSSSQIILKWKPPSDPNGN 624

Query: 228 LLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVI 287
           + +Y++ ++ +A ++           Y       P   +     + ++            
Sbjct: 625 ITHYLVFWERQAEDSELF-----ELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSA 679

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVE---------- 337
               + P T  + ++    SS     +            ++  R +G V           
Sbjct: 680 GECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRP 739

Query: 338 --------TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIP---VRTKQYGKTPGFGEQA 386
                   +  ++GL   T Y I L A +                RT    K        
Sbjct: 740 FEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADD----- 794

Query: 387 AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG-----------EGATTPPIPVRTKQ 435
                   +V   +      N ++ +W   + P G            G     +    K 
Sbjct: 795 --------IVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKH 846

Query: 436 YGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAP 485
           +    G   + L P   Y + + A S  G G+ T P       Y    + 
Sbjct: 847 FALERGCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFYVTDYLDVPSN 895

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score = 89.2 bits (220), Expect = 2e-18
 Identities = 47/303 (15%), Positives = 79/303 (26%), Gaps = 42/303 (13%)

Query: 35  TAPRDVQVRPLSSSTMVIQWDEPETPNGQITH--------PPTRAARSHA---------- 76
           + P D      SSS ++++W  P  PNG ITH                            
Sbjct: 596 SVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFELDYCLKGLKLPS 655

Query: 77  RLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPL----NLSCVAVGS 132
           R  +          H   +  D               L E+   S      +     V  
Sbjct: 656 RTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFV 715

Query: 133 PMPFVKWRKGQNIELTPDDKLPVGRNV-LTLDRVTESE-----NYT-----CIAASVLGV 181
           P P  K R   ++    +++        +  + +  S       Y      C   +    
Sbjct: 716 PRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEER 775

Query: 182 IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPK 238
              +  V  +    P          V         V L W  P E    ++ Y + Y+  
Sbjct: 776 CSVAAYVSARTM--PEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRY 833

Query: 239 A---ANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPG 295
                +   +     +     +R LSP   Y   I A +  G G  + P      +    
Sbjct: 834 GDEELHLCDTRKHFALERGCRLRGLSP-GNYSVRIRATSLAGNGSWTEPTYFYVTDYLDV 892

Query: 296 TAP 298
            + 
Sbjct: 893 PSN 895

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score =  177 bits (450), Expect = 5e-50
 Identities = 55/335 (16%), Positives = 102/335 (30%), Gaps = 54/335 (16%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDE--PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNN 538
           P    +          T+ + W    P   NG+I  Y+V  T+ +S      +   V+  
Sbjct: 8   PSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKS----HLQNYTVNAT 63

Query: 539 QLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTL 598
           +LT       +  Y   +     VG    +  + +       + P        ++  + +
Sbjct: 64  KLTV---NLTNDRYLATLTVRNLVGKSDAA-VLTIPACDFQATHPVMDLKAFPKDNMLWV 119

Query: 599 AWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 658
            W+ P    E++  Y L W                +      W +   +           
Sbjct: 120 EWTTPR---ESVKKYILEWCVLS-----------DKAPCITDWQQEDGTVH--------- 156

Query: 659 NDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA 718
                            TY    L  +  Y I +      G G+    I    KQ  P  
Sbjct: 157 ----------------RTYLRGNLAESKCYLITVTPVYADGPGSPES-IKAYLKQAPPSK 199

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P  V  + +      + W+  PV+  NG I  Y + +     +++  ++ +  + T + 
Sbjct: 200 GP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDS--SHTEYT 256

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
           L  L   T Y + + A T  G        T  T +
Sbjct: 257 LSSLTSDTLYMVRMAAYTDEGGKDGP-EFTFTTPK 290

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score =  129 bits (327), Expect = 2e-33
 Identities = 52/281 (18%), Positives = 91/281 (32%), Gaps = 34/281 (12%)

Query: 634 ETAVTLAWS--KPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIW 691
              V L W    P  +   I+ YE+       + K H +   V    LT    N  Y   
Sbjct: 22  YRTVQLVWKTLPPFEANGKILDYEVT----LTRWKSHLQNYTVNATKLTVNLTNDRYLAT 77

Query: 692 LAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVY 751
           L  ++  G+      + +    +    P  ++   P     + + W  P  E    +I+ 
Sbjct: 78  LTVRNLVGKSDAAV-LTIPACDFQATHPVMDLKAFP-KDNMLWVEWTTPR-ESVKKYILE 134

Query: 752 YKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           + +   +     ++          +++   L +   Y I V    + G G     I    
Sbjct: 135 WCVLSDKAP-CITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SIKAYL 192

Query: 812 HEDDPSEVCPTQNDFRKNKKT-------------NGSNFKGGY------LNDPMRFDVSD 852
            +  PS+  PT    +  K               NG  F   Y      +         D
Sbjct: 193 KQAPPSKG-PTVRTKKVGKNEAVLEWDQLPVDVQNG--FIRNYTIFYRTIIGNETAVNVD 249

Query: 853 GGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
               E  ++ L  DT+Y +++AA T +G  D  +  T  TP
Sbjct: 250 SSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEF-TFTTP 289

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score =  126 bits (319), Expect = 2e-32
 Identities = 39/269 (14%), Positives = 83/269 (30%), Gaps = 48/269 (17%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE 504
                N  Y   L  ++  G+      + +    ++      D++  P   + + ++W  
Sbjct: 66  TVNLTNDRYLATLTVRNLVGKSDAAV-LTIPACDFQATHPVMDLKAFP-KDNMLWVEW-- 121

Query: 505 PETPNGQITGYKVYYTQ--DQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSV 562
             TP   +  Y + +    D++  ++ W+ +    ++     +L     Y I V    + 
Sbjct: 122 -TTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYAD 180

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           GPG     +    +Q  PS+   +R   + +    L W +     +N             
Sbjct: 181 GPGSPE-SIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGF----------- 228

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
                                       I +Y +++                  Y+L+ L
Sbjct: 229 ----------------------------IRNYTIFYRTIIGNETAVNVDSSHTEYTLSSL 260

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
             +TLY + +AA +  G     P     T
Sbjct: 261 TSDTLYMVRMAAYTDEGGK-DGPEFTFTT 288

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score =  123 bits (311), Expect = 2e-31
 Identities = 51/389 (13%), Positives = 91/389 (23%), Gaps = 118/389 (30%)

Query: 201 PVAPLDVKISEVTA-----TSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGI 250
           P            +      +V+L W           +L Y +      ++     ++  
Sbjct: 4   PSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNAT 63

Query: 251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSST 310
             T            Y   +   N +G+   +   +         T P          + 
Sbjct: 64  KLTVNL-----TNDRYLATLTVRNLVGKSDAAV--LTIPACDFQATHPVMDLKAFPKDNM 116

Query: 311 MVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYI-WLAAQSPRGEGATTPPI 369
           + ++W    TP   +                        Y + W                
Sbjct: 117 LWVEW---TTPRESVKK----------------------YILEWCVLSDKAPCITDWQQE 151

Query: 370 PVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI 429
                                       TY    L  +  Y I +      G G+     
Sbjct: 152 DGTVH----------------------RTYLRGNLAESKCYLITVTPVYADGPGSPE--- 186

Query: 430 PVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQ 489
                                                     I    KQ  P   P  V+
Sbjct: 187 -----------------------------------------SIKAYLKQAPPSKGP-TVR 204

Query: 490 VRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDL 546
            + +  +  V++WD+   +  NG I  Y ++Y               VD++    T+S L
Sbjct: 205 TKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTII----GNETAVNVDSSHTEYTLSSL 260

Query: 547 TPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
           T  T+Y +R+ A+T  G           T
Sbjct: 261 TSDTLYMVRMAAYTDEGGKD-GPEFTFTT 288

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score = 75.2 bits (185), Expect = 8e-15
 Identities = 26/210 (12%), Positives = 53/210 (25%), Gaps = 36/210 (17%)

Query: 715 VPGAPP----QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT 770
            P   P    +          ++++ W+  P   +NG I+ Y++            ++  
Sbjct: 3   RPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNA 62

Query: 771 LKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNK 830
              + +  L        Y   +     +G   ++  +TI   +   +   P  +     K
Sbjct: 63  --TKLTVNLTN----DRYLATLTVRNLVGKSDAA-VLTIPACDFQATH--PVMDLKAFPK 113

Query: 831 KT---------NGSNFKGGYL--------NDPMRFD---VSDGGALELNVTGLQPDTIYT 870
                        S     Y+          P   D                L     Y 
Sbjct: 114 DNMLWVEWTTPRESV--KKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYL 171

Query: 871 IQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
           I V  +   G G   +          P++ 
Sbjct: 172 ITVTPVYADGPGS-PESIKAYLKQAPPSKG 200

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score = 63.3 bits (154), Expect = 7e-11
 Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 6/94 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGIITTYY 255
           P     V+  +V      L+W           +  Y I Y+    N     +    T Y 
Sbjct: 197 PSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEY- 255

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           T+ +L+  T Y   + A  + G          T 
Sbjct: 256 TLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTP 289

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score =  187 bits (474), Expect = 6e-50
 Identities = 78/609 (12%), Positives = 168/609 (27%), Gaps = 124/609 (20%)

Query: 168 SENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE- 226
           S    C +       +    +                 +++ +E+ +  + + W+     
Sbjct: 135 SGVKKCCSNGCGHTCQVPKTLYKG-------VPLKPRKELRFTELQSGQLEVKWSSKFNI 187

Query: 227 --TLLYYVIQYKP-------KAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277
               + YV+Q +        +   T +  ++        + ++ P   Y+F + AVN  G
Sbjct: 188 SIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHG 247

Query: 278 RGPPSSPAVITTGETEPGTAPRDVQVRPLSSS-------TMVIQWDEPETPNGQITAKHH 330
               ++P+       +P   P    +R  +S+       T+ I WD PE P+  +     
Sbjct: 248 TRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHH--- 304

Query: 331 RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHH 390
                              Y ++ +          T     +T    +            
Sbjct: 305 -------------------YKVFWSWMVSSKSLVPTKKKRRKTTDGFQN----------- 334

Query: 391 RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPN 450
                  +  L  L P+  Y + L A +  G+         +   +  +           
Sbjct: 335 -------SVILEKLQPDCDYVVELQAITYWGQT---RLKSAKVSLHFTSTHATNNKEQLV 384

Query: 451 TLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG 510
                 +  Q P      T P+ V    Y+ G               + + W +    + 
Sbjct: 385 KTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDG------------QLQVKVYWKKT--EDP 430

Query: 511 QITGYKVYY---TQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPL 567
            +  Y V +       +    +  +  + +     + DL+    Y + VQ          
Sbjct: 431 TVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKA 490

Query: 568 SAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDL 627
            A                     + E    L+                      AKP +L
Sbjct: 491 EAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVL-------------------AKPENL 531

Query: 628 RAVDIQE---TAVTLAWSKPTHSGENIIS-YELYWNDTYAKAKHHRRI-----------G 672
            A  I +        +W     +    ++ +++ W +   +++ +               
Sbjct: 532 SASFIVQDVNITGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPS 591

Query: 673 LVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTS 732
                ++  L P+TLY + +   +P GEG  T     RT +  P +              
Sbjct: 592 DHYVLTVPNLRPSTLYRLEVQVLTPGGEGPAT-IKTFRTPELPPSSAH-----RSHLKHR 645

Query: 733 IRISWEPPP 741
               ++P P
Sbjct: 646 HPHHYKPSP 654

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score =  181 bits (459), Expect = 5e-48
 Identities = 73/425 (17%), Positives = 134/425 (31%), Gaps = 71/425 (16%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSS-------TMV 499
           + P+  Y   +AA +  G    T P        +P   P    +R  +S+       T+ 
Sbjct: 230 IRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVT 289

Query: 500 IQWDEPETPNGQITGYKVYY----TQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTI 554
           I WD PE P+  +  YKV++    +    +P      +  D  Q +  +  L P   Y +
Sbjct: 290 IVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVV 349

Query: 555 RVQAFTSVGPGPLSAP--VLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIIS 612
            +QA T  G   L +    L  T     +    L           L + +   +    + 
Sbjct: 350 ELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVG 409

Query: 613 YELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIG 672
              Y +               +  V + W K       +  Y + W              
Sbjct: 410 APFYQD--------------GQLQVKVYWKKTEDPT--VNRYHVRWFPEACAHNRTTGSE 453

Query: 673 LVETYS------LTGLYPNTLYYIWLAAQSPRGEGA------TTPP---IPVRTKQYVPG 717
                +      L  L  +  Y + +    P+          TTPP   +  ++ + +  
Sbjct: 454 ASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGC 513

Query: 718 ------------APPQNVSCEPL---SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRS 762
                       A P+N+S   +    + +   SW+          +  +++ + E    
Sbjct: 514 LGEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMAK-ANLYQPMTGFQVTWAEVTTE 572

Query: 763 DSEASIVTLK---------NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
             + S+             +     +  L+  T YR+ V   T  G+GP++   T RT E
Sbjct: 573 SRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPAT-IKTFRTPE 631

Query: 814 DDPSE 818
             PS 
Sbjct: 632 LPPSS 636

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score =  141 bits (356), Expect = 6e-35
 Identities = 49/391 (12%), Positives = 107/391 (27%), Gaps = 74/391 (18%)

Query: 473 PVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSL-----PM 527
           P    +  P    ++++   L S  + ++W      + +   Y V    +  +       
Sbjct: 152 PKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDA 211

Query: 528 SAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ---GVPSQPR 584
           + W+T     ++   ++D+ P   Y  RV A    G    +AP            P  P 
Sbjct: 212 THWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPA 271

Query: 585 DLRAVDIQ-----ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTL 639
           +LR  +          VT+ W  P      +  Y+++W                      
Sbjct: 272 NLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFW---------------------- 309

Query: 640 AWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG 699
                  S ++++  +     T          G   +  L  L P+  Y + L A +  G
Sbjct: 310 ---SWMVSSKSLVPTKKKRRKTTD--------GFQNSVILEKLQPDCDYVVELQAITYWG 358

Query: 700 EG----------------ATTPPIPVRTKQYVPGAPPQNVSCEPL------------SST 731
           +                        V+T++             P                
Sbjct: 359 QTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQL 418

Query: 732 SIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIW 791
            +++ W+       N + V +  +     R+    +   + ++   +L +L    +Y++ 
Sbjct: 419 QVKVYWKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVT 478

Query: 792 VLAGTSIGDGPSSYPITIRTHEDDPSEVCPT 822
           V          +                   
Sbjct: 479 VQPIRPKSHSKAEAVFFTTPPCSALKGKSHK 509

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score =  116 bits (290), Expect = 8e-27
 Identities = 53/345 (15%), Positives = 92/345 (26%), Gaps = 70/345 (20%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET------- 676
            ++LR  ++Q   + + WS   +     + Y +     Y            +T       
Sbjct: 164 RKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQTTDE 223

Query: 677 -YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ-------NVSCEPL 728
              LT + P+  Y   +AA +  G    T P         P APP        N +    
Sbjct: 224 RVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSD 283

Query: 729 SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA------SIVTLKNQTSFVLDEL 782
            S ++ I W+ P  E  +  + +YK+ +     S S           T   Q S +L++L
Sbjct: 284 GSVTVTIVWDLP--EEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKL 341

Query: 783 KKWTEYRIWVLAGTSIGDGP-SSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFK--- 838
           +   +Y + + A T  G     S  +++       +         RK        F+   
Sbjct: 342 QPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRR 401

Query: 839 -----------------------------------------GGYLNDPMRFDVSDGGALE 857
                                                        N     + S G   E
Sbjct: 402 PTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHE 461

Query: 858 LN--VTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
               +  L     Y + V  +  K             P       
Sbjct: 462 NYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGK 506

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 83.5 bits (205), Expect = 1e-16
 Identities = 37/236 (15%), Positives = 63/236 (26%), Gaps = 43/236 (18%)

Query: 708 PVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQ------FVETGR 761
           P    + VP  P + +    L S  + + W        +   V Y +Q         +  
Sbjct: 152 PKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKF--NISIEPVIYVVQRRWNYGIHPSED 209

Query: 762 SDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCP 821
             +    V         L +++    Y+  V A    G    + P        DPS   P
Sbjct: 210 DATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPS-APP 268

Query: 822 TQNDFRKNKKTNGSNFKG-----------------GYL--------------NDPMRFDV 850
              + R    T  S+                     Y                   R   
Sbjct: 269 APANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKT 328

Query: 851 SDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKP---ETIKTPGGVPNRPHVN 903
           +DG    + +  LQPD  Y +++ A+T  G              +     N+  + 
Sbjct: 329 TDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLV 384

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score =  176 bits (447), Expect = 2e-49
 Identities = 66/347 (19%), Positives = 115/347 (33%), Gaps = 61/347 (17%)

Query: 465 EGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQS 524
               +  + V  +      AP D++   ++ +++  QW  P   N Q+TGY+V  T  + 
Sbjct: 5   HHHHSSGLEVLFQG-PAIPAPTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEK 60

Query: 525 LPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPR 584
                      D++    +S L   T Y + V A         +  V+   +    S PR
Sbjct: 61  TGPMKEINLAPDSSS-VVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLE--NVSPPR 117

Query: 585 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKP 644
             R  D  ET +T++W   T   E I  +++       +    R +              
Sbjct: 118 RARVTDATETTITISWRTKT---ETITGFQVDAVPANGQTPIQRTIKPDVR--------- 165

Query: 645 THSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATT 704
                                          +Y++TGL P T Y I+L   +     +  
Sbjct: 166 -------------------------------SYTITGLQPGTDYKIYLYTLNDNARSS-- 192

Query: 705 PPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS 764
              PV          P N+     +  S+ +SW+PP        I  Y +++ + G    
Sbjct: 193 ---PVVIDASTAIDAPSNLRFLATTPNSLLVSWQPP-----RARITGYIIKYEKPGSPPR 244

Query: 765 EASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           E         T   +  L+  TEY I+V+A  +            +T
Sbjct: 245 EVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLI-GRKKT 290

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score =  151 bits (383), Expect = 6e-41
 Identities = 71/369 (19%), Positives = 114/369 (30%), Gaps = 106/369 (28%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT-TYYTV 257
               AP D+K ++VT TS+   WT P+  L  Y ++  PK    P  EI+     +   V
Sbjct: 19  PAIPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVV 78

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDE 317
             L   T+YE  + A+ +     P+   V T     P   PR  +V   + +T+ I W  
Sbjct: 79  SGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSP---PRRARVTDATETTITISWRT 135

Query: 318 PETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYG 377
                  IT                       + +     + +     T    VR+    
Sbjct: 136 K---TETITG----------------------FQVDAVPANGQTPIQRTIKPDVRS---- 166

Query: 378 KTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYG 437
                                Y++TGL P T Y I+L   +     +             
Sbjct: 167 ---------------------YTITGLQPGTDYKIYLYTLNDNARSS------------- 192

Query: 438 KTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSST 497
                                              PV         AP +++    + ++
Sbjct: 193 -----------------------------------PVVIDASTAIDAPSNLRFLATTPNS 217

Query: 498 MVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQ 557
           +++ W     P  +ITGY + Y +  S P      +        TI+ L P T YTI V 
Sbjct: 218 LLVSWQP---PRARITGYIIKYEKPGS-PPREVVPRPRPGVTEATITGLEPGTEYTIYVI 273

Query: 558 AFTSVGPGP 566
           A  +     
Sbjct: 274 ALKNNQKSE 282

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score =  123 bits (310), Expect = 3e-31
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 29/274 (10%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW--NDTYAKAKHHRRIGLVETYSLTG 681
           P DL+   +  T+++  W+ P      +  Y +     +     K         +  ++G
Sbjct: 24  PTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSG 80

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPP 741
           L   T Y + + A            +          +PP+       + T+I ISW    
Sbjct: 81  LMVATKYEVSVYALKDTLTSRPAQGVVTTL---ENVSPPRRARVTDATETTITISWRTK- 136

Query: 742 VERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG 801
                  I  +++  V           +   +  S+ +  L+  T+Y+I++         
Sbjct: 137 ----TETITGFQVDAVPANGQTPIQRTIK-PDVRSYTITGLQPGTDYKIYLYTLNDNARS 191

Query: 802 PSSYPITIRTHEDDPSEVCPTQNDFRKN------KKTNGS------NFKGGYLNDPMRFD 849
               P+ I       +           N      +            ++           
Sbjct: 192 S---PVVIDASTAIDAPSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVVP 248

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGD 883
               G  E  +TGL+P T YTI V AL      +
Sbjct: 249 RPRPGVTEATITGLEPGTEYTIYVIALKNNQKSE 282

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score =  118 bits (298), Expect = 1e-29
 Identities = 41/256 (16%), Positives = 73/256 (28%), Gaps = 56/256 (21%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           L   T Y + + A            +       E  + PR  +V   + +T+ I W    
Sbjct: 81  LMVATKYEVSVYALKDTLTSRPAQGVVTTL---ENVSPPRRARVTDATETTITISWRTK- 136

Query: 507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL-TTISDLTPHTIYTIRVQAFTSVGPG 565
                ITG++V               + +  +    TI+ L P T Y I +         
Sbjct: 137 --TETITGFQVDAVPANG---QTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARS 191

Query: 566 PLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPR 625
               PV++         P +LR +     ++ ++W  P      I  Y + +        
Sbjct: 192 S---PVVIDAST-AIDAPSNLRFLATTPNSLLVSWQPPRA---RITGYIIKYEKP----- 239

Query: 626 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPN 685
                                              +  +    R    V   ++TGL P 
Sbjct: 240 ----------------------------------GSPPREVVPRPRPGVTEATITGLEPG 265

Query: 686 TLYYIWLAAQSPRGEG 701
           T Y I++ A     + 
Sbjct: 266 TEYTIYVIALKNNQKS 281

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score =  115 bits (290), Expect = 1e-28
 Identities = 46/272 (16%), Positives = 90/272 (33%), Gaps = 38/272 (13%)

Query: 119 LDSPLNLSCVAVGSPMPFVKWRKGQN------IELTPDDK--------LPVGRNVLTLDR 164
           + +P +L    V       +W           + +TP +K        L    + + +  
Sbjct: 21  IPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSG 80

Query: 165 VTESENYTC--IAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWT 222
           +  +  Y     A         +  V         L     P   ++++ T T++ + W 
Sbjct: 81  LMVATKYEVSVYALKDTLTSRPAQGVVTT------LENVSPPRRARVTDATETTITISWR 134

Query: 223 YPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS 282
             +ET+  + +   P    TP           YT+  L P T+Y+ Y+  +N+  R  P 
Sbjct: 135 TKTETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPV 194

Query: 283 SPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETP-----------NGQITAKHHR 331
                    T    AP +++    + +++++ W  P                       R
Sbjct: 195 V----IDASTAID-APSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVVPR 249

Query: 332 RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG 363
               V   ++TGL P T Y I++ A     + 
Sbjct: 250 PRPGVTEATITGLEPGTEYTIYVIALKNNQKS 281

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 97.2 bits (242), Expect = 3e-22
 Identities = 31/213 (14%), Positives = 58/213 (27%), Gaps = 24/213 (11%)

Query: 700 EGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVET 759
               +  + V  +       P ++    ++ TS+   W PP     N  +  Y+++    
Sbjct: 5   HHHHSSGLEVLFQG-PAIPAPTDLKFTQVTPTSLSAQWTPP-----NVQLTGYRVRVTPK 58

Query: 760 GRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEV 819
            ++     I    + +S V+  L   T+Y + V A         +  +        P   
Sbjct: 59  EKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSP--- 115

Query: 820 CPTQNDFRKNKKTN--------GSNFKGGYL------NDPMRFDVSDGGALELNVTGLQP 865
            P +       +T              G  +                       +TGLQP
Sbjct: 116 -PRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQP 174

Query: 866 DTIYTIQVAALTRKGDGDRSKPETIKTPGGVPN 898
            T Y I +  L           +         N
Sbjct: 175 GTDYKIYLYTLNDNARSSPVVIDASTAIDAPSN 207

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 79.8 bits (197), Expect = 2e-16
 Identities = 44/294 (14%), Positives = 83/294 (28%), Gaps = 51/294 (17%)

Query: 28  ILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETP-------------NGQITHPPTRAARS 74
           +       AP D++   ++ +++  QW  P                 G +         S
Sbjct: 15  LFQGPAIPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEINLAPDSS 74

Query: 75  HARLAAQSVLRRGR------LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCV 128
              ++    L           A      + P + V        P         P      
Sbjct: 75  SVVVSG---LMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSP---------PRRARVT 122

Query: 129 AVGSPMPFVKWRKGQN------IELTPDD-------KLPVGRNVLTLDRVTESENYTCIA 175
                   + WR          ++  P +        +       T+  +    +Y    
Sbjct: 123 DATETTITISWRTKTETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYL 182

Query: 176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQY 235
            ++     +S +V          T   AP +++    T  S+ + W  P   +  Y+I+Y
Sbjct: 183 YTLNDNARSSPVVIDA------STAIDAPSNLRFLATTPNSLLVSWQPPRARITGYIIKY 236

Query: 236 KPKAANT-PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288
           +   +             T  T+  L P TEY  Y+IA+ N  +  P      T
Sbjct: 237 EKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIGRKKT 290

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score =  158 bits (402), Expect = 4e-44
 Identities = 48/269 (17%), Positives = 93/269 (34%), Gaps = 47/269 (17%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL 540
              AP++   +   S  +   W  P   +G+  GY+V Y        S  E  ++D+   
Sbjct: 5   DLGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGD---SESEAHLLDSKVP 58

Query: 541 T-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLA 599
           +  +++L P+  Y ++V A+ + G GP S+ V  +T Q VPS+P  L    +  T   L+
Sbjct: 59  SVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLS 118

Query: 600 WSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 659
           W++P  +   I +YE+ +       R +  +                             
Sbjct: 119 WAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDN---------------------- 156

Query: 660 DTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTKQYVPGA 718
                              +  L  +  Y   + A++  G G      I + T+   P +
Sbjct: 157 ------------PKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMS 204

Query: 719 PPQNVSCEPLSSTS-----IRISWEPPPV 742
            P       + + S       + +    +
Sbjct: 205 IPIIPDIPIVDAQSGEDYDSFLMYSDDVL 233

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score =  144 bits (365), Expect = 4e-39
 Identities = 39/200 (19%), Positives = 65/200 (32%), Gaps = 20/200 (10%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNL 260
             AP +       +  +  +W  PS   + Y ++Y  +  +   + +         + NL
Sbjct: 6   LGAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNL 65

Query: 261 SPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPET 320
            PY +YE  + A    G GP SS     T +  P   P  +    +SS+   + W EP  
Sbjct: 66  YPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPS-EPGRLAFNVVSSTVTQLSWAEPAE 124

Query: 321 PNGQIT-------------------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG 361
            NG+IT                    K            +  L  +  Y   + A++  G
Sbjct: 125 TNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAG 184

Query: 362 EGATTPPIPVRTKQYGKTPG 381
            G     I     Q  +   
Sbjct: 185 WGPEREAIINLATQPKRPMS 204

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score =  137 bits (347), Expect = 9e-37
 Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 14/221 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYEL-YWNDTYAKAKHHRRIGLVETYSLTGL 682
           P++  A       +   W  P  SG+  + Y + YW    ++++ H     V +  LT L
Sbjct: 9   PQNPNAKAAGSRKIHFNWLPP--SGK-PMGYRVKYWIQGDSESEAHLLDSKVPSVELTNL 65

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPV 742
           YP   Y + + A   +GEG  +  +  RT Q VP  P   ++   +SST  ++SW  P  
Sbjct: 66  YPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPG-RLAFNVVSSTVTQLSWAEP-- 122

Query: 743 ERSNGHIVYYKLQFVETGRSDSEAS-----IVTLKNQTSFVLDELKKWTEYRIWVLAGTS 797
             +NG I  Y++ +      +         +V        +++ L++   YR  V A   
Sbjct: 123 AETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNG 182

Query: 798 IGDGPSSYP-ITIRTHEDDPSEVCPTQNDFRKNKKTNGSNF 837
            G GP     I + T    P  + P   D       +G ++
Sbjct: 183 AGWGPEREAIINLATQPKRPMSI-PIIPDIPIVDAQSGEDY 222

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score =  136 bits (343), Expect = 3e-36
 Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 16/180 (8%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           LYP   Y + + A   +GEG  +  +  RT Q  P   P  +    +SS+   + W EP 
Sbjct: 65  LYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPS-EPGRLAFNVVSSTVTQLSWAEPA 123

Query: 507 TPNGQITGYKVYY--TQDQSLPMSAWETQVVDNNQLT--TISDLTPHTIYTIRVQAFTSV 562
             NG+IT Y+V Y    D + P+   +  +VDN +     I +L     Y   V+A    
Sbjct: 124 ETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGA 183

Query: 563 GPGPLSAPVL-VKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY 621
           G GP    ++ + TQ   P     +  + I +            SGE+  S+ +Y +D  
Sbjct: 184 GWGPEREAIINLATQPKRPMSIPIIPDIPIVD----------AQSGEDYDSFLMYSDDVL 233

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score =  134 bits (338), Expect = 1e-35
 Identities = 47/210 (22%), Positives = 78/210 (37%), Gaps = 32/210 (15%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
           +    PQN + +   S  I  +W PP     +G  + Y++++   G S+SEA ++     
Sbjct: 4   MDLGAPQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDS-KV 57

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKN----- 829
            S  L  L  + +Y + V A  + G+GP S  ++ RTH++ PSE  P +  F        
Sbjct: 58  PSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSE--PGRLAFNVVSSTVT 115

Query: 830 -------KKTNG-----------SNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTI 871
                   +TNG            N     +    +  V +     L +  L+    Y  
Sbjct: 116 QLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRY 175

Query: 872 QVAALTRKGDGDRSKPE-TIKTPGGVPNRP 900
            V A    G G   +    + T    P   
Sbjct: 176 TVKARNGAGWGPEREAIINLATQPKRPMSI 205

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score = 84.1 bits (208), Expect = 2e-18
 Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 15/133 (11%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSE------ISGII 251
           P  P  +  + V++T  +L W  P+ET   +  Y + Y     +           +    
Sbjct: 99  PSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPK 158

Query: 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAV-ITTGETEPGTAPRDVQVRPLSSS- 309
                + NL     Y + + A N  G GP     + + T    P + P    +  + +  
Sbjct: 159 NRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPIVDAQS 218

Query: 310 ----TMVIQWDEP 318
                  + + + 
Sbjct: 219 GEDYDSFLMYSDD 231

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score = 83.7 bits (207), Expect = 4e-18
 Identities = 35/249 (14%), Positives = 65/249 (26%), Gaps = 51/249 (20%)

Query: 290 GETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT-------------AKHHRRIGLV 336
           G      AP++   +   S  +   W     P+G+               ++ H     V
Sbjct: 1   GSHMDLGAPQNPNAKAAGSRKIHFNWLP---PSGKPMGYRVKYWIQGDSESEAHLLDSKV 57

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLV 396
            +  LT LYP   Y + + A   +GEG  +  +  RT Q    P                
Sbjct: 58  PSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQE--VPSE-------------P 102

Query: 397 ETYSLTGLYPNTLYYIWLAAQSPRG----------EGATTPPIPVRTKQYGKTPGFGEQA 446
              +   +        W       G                      K+           
Sbjct: 103 GRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRML 162

Query: 447 ----LYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTKQYEPGTAPRDVQVRPLSSS----- 496
               L  +  Y   + A++  G G      I + T+   P + P    +  + +      
Sbjct: 163 LIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPIVDAQSGEDY 222

Query: 497 TMVIQWDEP 505
              + + + 
Sbjct: 223 DSFLMYSDD 231

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 36  APRDVQVRPLSSSTMVIQWDEPETPNGQITH 66
            P  +    +SS+   + W EP   NG+IT 
Sbjct: 101 EPGRLAFNVVSSTVTQLSWAEPAETNGEITA 131

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score =  153 bits (389), Expect = 1e-42
 Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 25/200 (12%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-------LLYYVIQYKPKAANTPYSEISGIITT 253
            + P+ V+ S ++  ++R+ W   S           YY +++K         + +   T 
Sbjct: 5   MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTL 64

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRP--LSSSTM 311
            Y V  L P T YEF ++          S  A  TT E  P + P+DV V        T+
Sbjct: 65  SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTI 124

Query: 312 VIQWDEPETPNGQIT----------------AKHHRRIGLVETYSLTGLYPNTLYYIWLA 355
           ++ W  P   NG+IT                      +G   T+ +  L  +T YY  + 
Sbjct: 125 IVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQ 184

Query: 356 AQSPRGEGATTPPIPVRTKQ 375
           A++ +G G  +  +  RT +
Sbjct: 185 ARNSKGMGPMSEAVQFRTPK 204

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score =  140 bits (355), Expect = 4e-38
 Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 11/202 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIIS----YELYWNDTYAKAKHHRRIGLVET-YS 678
           P  ++A  +    + + W+  +      I+    Y + W         ++        Y 
Sbjct: 8   PVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYL 67

Query: 679 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEP--LSSTSIRIS 736
           +TGL PNTLY   +     R     +      T + VP +PP++V+         +I ++
Sbjct: 68  VTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVN 127

Query: 737 WEPPPVERSNGHIVYYKLQFVETGRSDSEASIV--TLKNQTSFVLDELKKWTEYRIWVLA 794
           W+PP    +NG I  Y + +     ++    ++   + N+ +  + EL   T Y   + A
Sbjct: 128 WQPP--SEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQA 185

Query: 795 GTSIGDGPSSYPITIRTHEDDP 816
             S G GP S  +  RT +   
Sbjct: 186 RNSKGMGPMSEAVQFRTPKAHH 207

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score =  140 bits (354), Expect = 5e-38
 Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 3/137 (2%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRP--LSSSTMVIQWDE 504
           L PNTLY   +     R     +      T +  P + P+DV V        T+++ W  
Sbjct: 71  LKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQP 130

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVG 563
           P   NG+ITGY +YY+ D +  +  W  + V  N+LT  I +LT  T Y  ++QA  S G
Sbjct: 131 PSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKG 190

Query: 564 PGPLSAPVLVKTQQGVP 580
            GP+S  V  +T +   
Sbjct: 191 MGPMSEAVQFRTPKAHH 207

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score =  139 bits (351), Expect = 1e-37
 Identities = 39/250 (15%), Positives = 78/250 (31%), Gaps = 52/250 (20%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETP----NGQITGYKVYYTQDQSLPMSAWETQVVD 536
           P   P  VQ   LS  T+ I W +   P          Y V +  +     +  + +  +
Sbjct: 4   PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIP---ANTKYKNAN 60

Query: 537 NNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPR---DLRAVDIQ 592
              L+  ++ L P+T+Y   V           S      T + VP+ P     + + + +
Sbjct: 61  ATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGK 120

Query: 593 ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENII 652
              + + W  P+ +   I  Y +Y++           ++                     
Sbjct: 121 PKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRL-------------- 166

Query: 653 SYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
                                  T+ +  L  +T YY  + A++ +G G  +  +  RT 
Sbjct: 167 -----------------------THQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTP 203

Query: 713 QYVPGAPPQN 722
           +    A   +
Sbjct: 204 K----AHHHH 209

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score =  132 bits (333), Expect = 3e-35
 Identities = 40/211 (18%), Positives = 65/211 (30%), Gaps = 26/211 (12%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPP--PVERSNGHIVYYKLQFVETGRSDSEASIVTLK 772
           +P  PP  V    LS  +IRI+W     P  +      YY +++     ++++       
Sbjct: 3   LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN-A 61

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKN--- 829
              S+++  LK  T Y   V+          S      T E  P+   P           
Sbjct: 62  TTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSP-PKDVTVVSKEGK 120

Query: 830 -----------KKTNGS--------NFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYT 870
                       + NG         +            +   G  L   +  L  DT Y 
Sbjct: 121 PKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYY 180

Query: 871 IQVAALTRKGDGDRSKPETIKTPGGVPNRPH 901
            ++ A   KG G  S+    +TP    +  H
Sbjct: 181 FKIQARNSKGMGPMSEAVQFRTPKAHHHHHH 211

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score = 71.8 bits (176), Expect = 3e-14
 Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 6/102 (5%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGII---TTY 254
           P   + V   E    ++ ++W  PSE    +  Y+I Y        +  +   +      
Sbjct: 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLT 167

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGT 296
           + ++ L+  T Y F I A N+ G GP S      T +     
Sbjct: 168 HQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAHHHH 209

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score =  155 bits (394), Expect = 2e-42
 Identities = 54/342 (15%), Positives = 101/342 (29%), Gaps = 61/342 (17%)

Query: 470 PPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSA 529
           P I            P  + VR +S +   ++W     P  ++    + Y          
Sbjct: 3   PGISGGGGGIPVIDGPTQILVRDVSDTVAFVEWT---PPRAKVDFILLKYGLVGGEGGKT 59

Query: 530 WETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAV 589
                   +Q  ++  L P + Y + + A         S+             P++LR  
Sbjct: 60  TFRLQPPLSQ-YSVQALRPGSRYEVSISAVRGTNESDASSTQFTT----EIDAPKNLRVG 114

Query: 590 DIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGE 649
               T++ L W            Y++ ++    +      V       T           
Sbjct: 115 SRTATSLDLEWDNSEA---EAQEYKVVYSTLAGEQYHEVLVPKGIGPTT----------- 160

Query: 650 NIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPV 709
                                       +LT L P T Y + ++A     +       P 
Sbjct: 161 --------------------------KTTLTDLVPGTEYGVGISAVMNSKQSI-----PA 189

Query: 710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV 769
                     P+++     S TSI + W        +G I +Y++ F  +    SE ++ 
Sbjct: 190 TMNARTELDSPRDLMVTASSETSISLIWTKA-----SGPIDHYRITFTPSSGISSEVTVP 244

Query: 770 TLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
              ++TS+ L +L+   EY I + A         S  +   T
Sbjct: 245 R--DRTSYTLTDLEPGAEYIISITAERGRQQSLEST-VDAFT 283

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score =  152 bits (385), Expect = 2e-41
 Identities = 58/370 (15%), Positives = 112/370 (30%), Gaps = 107/370 (28%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYT 256
           + +   P  + + +V+ T   ++WT P   + + +++Y         +        + Y+
Sbjct: 12  IPVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPPLSQYS 71

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWD 316
           V+ L P + YE  I AV        SS    T        AP++++V   +++++ ++WD
Sbjct: 72  VQALRPGSRYEVSISAVRGTNESDASSTQFTT-----EIDAPKNLRVGSRTATSLDLEWD 126

Query: 317 EPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY 376
                  +                         Y +                       Y
Sbjct: 127 NS---EAEAQE----------------------YKV----------------------VY 139

Query: 377 GKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY 436
               G         + IG     +LT L P T Y + ++A     +     P  +     
Sbjct: 140 STLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQS---IPATMN---- 192

Query: 437 GKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSS 496
                                         A T              +PRD+ V   S +
Sbjct: 193 ------------------------------ARTEL-----------DSPRDLMVTASSET 211

Query: 497 TMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRV 556
           ++ + W +    +G I  Y++ +T        + E  V  +    T++DL P   Y I +
Sbjct: 212 SISLIWTK---ASGPIDHYRITFTPSSG---ISSEVTVPRDRTSYTLTDLEPGAEYIISI 265

Query: 557 QAFTSVGPGP 566
            A        
Sbjct: 266 TAERGRQQSL 275

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score =  130 bits (329), Expect = 8e-34
 Identities = 63/424 (14%), Positives = 116/424 (27%), Gaps = 150/424 (35%)

Query: 283 SPAVITTGETEPG-TAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSL 341
           SP +   G   P    P  + VR +S +   ++W  P      I                
Sbjct: 2   SPGISGGGGGIPVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFIL--------------- 46

Query: 342 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSL 401
                  L Y  +  +  +      PP                           +  YS+
Sbjct: 47  -------LKYGLVGGEGGKTTFRLQPP---------------------------LSQYSV 72

Query: 402 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQS 461
             L P + Y + ++A     E   +                                   
Sbjct: 73  QALRPGSRYEVSISAVRGTNESDASSTQ-------------------------------- 100

Query: 462 PRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQ 521
                 TT              AP++++V   +++++ ++WD       +   YKV Y+ 
Sbjct: 101 -----FTTEI-----------DAPKNLRVGSRTATSLDLEWDN---SEAEAQEYKVVYST 141

Query: 522 DQSLPM-SAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
                       + +     TT++DL P T Y + + A  +       A +  +T     
Sbjct: 142 LAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSI-PATMNART---EL 197

Query: 581 SQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLA 640
             PRDL      ET+++L W+K +                                    
Sbjct: 198 DSPRDLMVTASSETSISLIWTKASG----------------------------------- 222

Query: 641 WSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 700
                     I  Y + +  +   +          +Y+LT L P   Y I + A+  R +
Sbjct: 223 ---------PIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQ 273

Query: 701 GATT 704
              +
Sbjct: 274 SLES 277

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score =  117 bits (296), Expect = 2e-29
 Identities = 43/281 (15%), Positives = 79/281 (28%), Gaps = 40/281 (14%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET--YSLTG 681
           P  +   D+ +T   + W+ P      +    L +     +              YS+  
Sbjct: 18  PTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQA 74

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPP 741
           L P + Y + ++A     E          T+       P+N+     ++TS+ + W+   
Sbjct: 75  LRPGSRYEVSISAVRGTNESD-----ASSTQFTTEIDAPKNLRVGSRTATSLDLEWDNSE 129

Query: 742 VERSNGHIVYYKLQFVETGRSDSEASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSIG 799
                     YK+ +           +V       T   L +L   TEY + + A  +  
Sbjct: 130 -----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSK 184

Query: 800 DGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGS---------NFKGGYL------ND 844
               +  +  RT  D P        D      +  S              Y       + 
Sbjct: 185 QSIPA-TMNARTELDSPR-------DLMVTASSETSISLIWTKASGPIDHYRITFTPSSG 236

Query: 845 PMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRS 885
                          +T L+P   Y I + A   +     S
Sbjct: 237 ISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLES 277

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score =  106 bits (266), Expect = 2e-25
 Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 23/183 (12%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGII---TTYY 255
           T   AP ++++   TATS+ L+W         Y + Y   A    +  +       TT  
Sbjct: 103 TEIDAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKT 162

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQW 315
           T+ +L P TEY   I AV N  +  P++        TE   +PRD+ V   S +++ + W
Sbjct: 163 TLTDLVPGTEYGVGISAVMNSKQSIPAT----MNARTELD-SPRDLMVTASSETSISLIW 217

Query: 316 DEPETPNGQIT------------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG 363
            +    +G I             +          +Y+LT L P   Y I + A+  R + 
Sbjct: 218 TKA---SGPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQS 274

Query: 364 ATT 366
             +
Sbjct: 275 LES 277

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 82.5 bits (204), Expect = 2e-17
 Identities = 28/206 (13%), Positives = 58/206 (28%), Gaps = 18/206 (8%)

Query: 705 PPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS 764
           P I            P  +    +S T   + W PP        + +  L++   G    
Sbjct: 3   PGISGGGGGIPVIDGPTQILVRDVSDTVAFVEWTPPR-----AKVDFILLKYGLVGGEGG 57

Query: 765 EASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVC---P 821
           + +       + + +  L+  + Y + + A     +  +S      T  D P  +     
Sbjct: 58  KTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESDAS-STQFTTEIDAPKNLRVGSR 116

Query: 822 TQNDFR---KNKKTNGSNFK------GGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQ 872
           T         N +     +K       G     +      G   +  +T L P T Y + 
Sbjct: 117 TATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVG 176

Query: 873 VAALTRKGDGDRSKPETIKTPGGVPN 898
           ++A+        +            +
Sbjct: 177 ISAVMNSKQSIPATMNARTELDSPRD 202

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 75.6 bits (186), Expect = 5e-15
 Identities = 47/289 (16%), Positives = 87/289 (30%), Gaps = 47/289 (16%)

Query: 30  VTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ--ITHPPTRAARSHARLAAQSVLRRG 87
           +      P  + VR +S +   ++W  P        + +              Q  L + 
Sbjct: 12  IPVID-GPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPPLSQY 70

Query: 88  RLAH------------AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP 135
            +              AVR   +       QF+    A        P NL   +  +   
Sbjct: 71  SVQALRPGSRYEVSISAVRGT-NESDASSTQFTTEIDA--------PKNLRVGSRTATSL 121

Query: 136 FVKWR----------------KGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVL 179
            ++W                  G+        K        TL  +     Y    ++V+
Sbjct: 122 DLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVM 181

Query: 180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKA 239
              ++              T   +P D+ ++  + TS+ L WT  S  + +Y I + P +
Sbjct: 182 NSKQSIPATMNAR------TELDSPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSS 235

Query: 240 ANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288
             +    +    T+Y T+ +L P  EY   I A     +   S+    T
Sbjct: 236 GISSEVTVPRDRTSY-TLTDLEPGAEYIISITAERGRQQSLESTVDAFT 283

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score =  152 bits (385), Expect = 4e-41
 Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 20/220 (9%)

Query: 95  QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKL 153
           +V  P +   P+  +     +  +    +++     G P P + W+K    I+     ++
Sbjct: 95  EVEVPAKIHLPKT-LEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQV 153

Query: 154 PVGRNVLTLDRVTESE-----NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVK 208
            V R+  +L      E      Y   A +  G+ + +  + V         +P  P  VK
Sbjct: 154 IVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA-------DVPDPPRGVK 206

Query: 209 ISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYT 264
           +S+V+  SV L WT P+      +  Y+++     A   +  +     T YTV NL   T
Sbjct: 207 VSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAER-WLRVGQARETRYTVINLFGKT 265

Query: 265 EYEFYIIAVNNLGRGPPSSP-AVITTGETEPGTAPRDVQV 303
            Y+F +IA N  G   PS P     T E +      D +V
Sbjct: 266 SYQFRVIAENKFGLSKPSEPSEPTITKEDKTRAMNYDEEV 305

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 67.9 bits (166), Expect = 3e-12
 Identities = 56/303 (18%), Positives = 97/303 (32%), Gaps = 44/303 (14%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK------LPVG 156
           + P F       L V   S   L C   G P P VKW +    E+  D           G
Sbjct: 3   MAPHFKEEL-RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGK-EIIADGLKYRIQEFKGG 60

Query: 157 RNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTA 214
            + L +  VT+ +   Y   A +  G +  +  ++V  +    + LP     +       
Sbjct: 61  YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEV--EVPAKIHLPKTLEGMGAVHALR 118

Query: 215 -TSVRLDWT---YPSETLLYY----VIQYKPKAANTPYSEISGIITTYYTVRNLS-PYTE 265
              V +       P   + +     +I              + ++      R  +  Y  
Sbjct: 119 GEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYV- 177

Query: 266 YEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-- 323
               + A N  G         +     +    PR V+V  +S  ++ + W EP +  G  
Sbjct: 178 ----VCAKNRFG----IDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSK 229

Query: 324 ---------QITAKHHRRIGLV--ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI-PV 371
                      TA+   R+G      Y++  L+  T Y   + A++  G    + P  P 
Sbjct: 230 ITNYIVEKCATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPT 289

Query: 372 RTK 374
            TK
Sbjct: 290 ITK 292

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 62.1 bits (151), Expect = 2e-10
 Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 459 AQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKV 517
           A++  G    T  + V      P   PR V+V  +S  ++ + W EP +  G  IT Y V
Sbjct: 180 AKNRFGIDQKTVELDVADV---PD-PPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIV 235

Query: 518 YYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
                 +     W           T+ +L   T Y  RV A    G    S P      +
Sbjct: 236 EK---CATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITK 292

Query: 578 GVPSQP 583
              ++ 
Sbjct: 293 EDKTRA 298

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 62.1 bits (151), Expect = 2e-10
 Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 8/113 (7%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASIVTLK 772
           VP  PP+ V    +S  S+ ++W  P    S+G   I  Y ++   T         V   
Sbjct: 198 VPD-PPRGVKVSDVSRDSVNLTWTEP---ASDGGSKITNYIVEKCATTAERWLR--VGQA 251

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQND 825
            +T + +  L   T Y+  V+A    G    S P      ++D +       +
Sbjct: 252 RETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKTRAMNYDEE 304

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 50.5 bits (121), Expect = 1e-06
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 2/102 (1%)

Query: 624 PRDLRAVDIQETAVTLAWSKP-THSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
           PR ++  D+   +V L W++P +  G  I +Y +    T A+            Y++  L
Sbjct: 202 PRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQARETRYTVINL 261

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPI-PVRTKQYVPGAPPQNV 723
           +  T Y   + A++  G    + P  P  TK+    A   + 
Sbjct: 262 FGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKTRAMNYDE 303

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score =  141 bits (357), Expect = 2e-39
 Identities = 55/117 (47%), Positives = 79/117 (67%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++ P+  +T +  P +APRDVQ R LSS+T+++QW EPE PNGQI GY+VYYT D 
Sbjct: 1   GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDP 60

Query: 524 SLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
           +  ++ W    V ++Q+TTI +L P   Y+++V AFTS+G GPLS+ + V TQ G  
Sbjct: 61  TQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSG 117

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score =  114 bits (287), Expect = 4e-30
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 3/119 (2%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++ P+  +T +  P + P++V    LSST+I + W+ P  E  NG I  Y++ +  
Sbjct: 1   GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEP--EEPNGQIQGYRVYYTM 58

Query: 759 TG-RSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
              +  +      + +     +  L     Y + VLA TSIGDGP S  I + T     
Sbjct: 59  DPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSG 117

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 96.3 bits (240), Expect = 7e-24
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 15/114 (13%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT---------- 326
           G    S P +  T E  P +APRDVQ R LSS+T+++QW EPE PNGQI           
Sbjct: 1   GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDP 60

Query: 327 -----AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                      +   +  ++  L P   Y + + A +  G+G  +  I V T+ 
Sbjct: 61  TQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQT 114

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 72.1 bits (177), Expect = 2e-15
 Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 43/157 (27%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S PVL +T +  PS                                         
Sbjct: 1   GSSGSSGPVLTQTSEQAPSSA--------------------------------------- 21

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW---NDTYAKAKHHRRIGLVETYSL 679
            PRD++A  +  T + + W +P      I  Y +Y+      +        +   +  ++
Sbjct: 22  -PRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTI 80

Query: 680 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVP 716
             L P   Y + + A +  G+G  +  I V T+    
Sbjct: 81  GNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSG 117

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 68.6 bits (168), Expect = 5e-14
 Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 5/100 (5%)

Query: 203 APLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIIT--TYYTV 257
           AP DV+   +++T++ + W  P E    +  Y + Y         + +   +      T+
Sbjct: 21  APRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTI 80

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
            NL P   Y   ++A  ++G GP SS   + T      ++
Sbjct: 81  GNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGPSS 120

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 57.4 bits (139), Expect = 3e-10
 Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 20/118 (16%)

Query: 799 GDGPSSYPITIRTHEDDPSEVCPTQNDFRKN------------KKTNG--SNFKGGYLND 844
           G   SS P+  +T E  PS   P     R              ++ NG    ++  Y  D
Sbjct: 1   GSSGSSGPVLTQTSEQAPSSA-PRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMD 59

Query: 845 PMRFD-----VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           P +        +   +    +  L P   Y+++V A T  GDG  S    + T  G  
Sbjct: 60  PTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSG 117

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 51.3 bits (123), Expect = 5e-08
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 19 PLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITH 66
               +        P +APRDVQ R LSS+T+++QW EPE PNGQI  
Sbjct: 4  GSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQG 51

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score =  141 bits (357), Expect = 2e-39
 Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 2/122 (1%)

Query: 693 AAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYY 752
           ++ +  G G +T  I V T   VP APPQNVS E ++S SI++SW PPP    NG I  Y
Sbjct: 5   SSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGY 64

Query: 753 KLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTH 812
           K++  +T R     ++    N   ++   L+K ++Y   V A T  G GP S   T  T 
Sbjct: 65  KIRHRKTTRRGEMETLEP--NNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETP 122

Query: 813 ED 814
           E+
Sbjct: 123 EN 124

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score =  120 bits (303), Expect = 3e-32
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 458 AAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGY 515
           ++ +  G G +T  I V T    P   P++V +  ++S ++ + W  P   T NG ITGY
Sbjct: 5   SSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGY 64

Query: 516 KVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVK 574
           K+ + +         E + ++ N L    + L   + Y+ +V A T  G GP S     +
Sbjct: 65  KIRHRKTTRR----GEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAE 120

Query: 575 TQQ 577
           T +
Sbjct: 121 TPE 123

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 95.5 bits (238), Expect = 2e-23
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 14/118 (11%)

Query: 272 AVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT--- 326
           + N  G G  +    + T    P   P++V +  ++S ++ + W  P   T NG IT   
Sbjct: 6   SGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYK 65

Query: 327 ---------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                     +          Y  TGL   + Y   ++A +  G G  +      T +
Sbjct: 66  IRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 82.4 bits (204), Expect = 8e-19
 Identities = 25/162 (15%), Positives = 47/162 (29%), Gaps = 42/162 (25%)

Query: 554 IRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISY 613
               +    GPG  +  + V T   VPS P                              
Sbjct: 2   SSGSSGNRYGPGVSTDDITVVTLSDVPSAP------------------------------ 31

Query: 614 ELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN--IISYELYWNDTYAKAKHHRRI 671
                     P+++    +   ++ ++W  P    +N  I  Y++    T  + +     
Sbjct: 32  ----------PQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMETLE 81

Query: 672 GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713
                Y  TGL   + Y   ++A +  G G  +      T +
Sbjct: 82  PNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 68.9 bits (169), Expect = 4e-14
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 202 VAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGIITTYYT 256
             P +V +  V + S+++ W  P        +  Y I+++          +      +Y 
Sbjct: 30  APPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMETLEPN-NLWYL 88

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
              L   ++Y F + A+   G GPPS+     T E
Sbjct: 89  FTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 61.9 bits (151), Expect = 9e-12
 Identities = 30/122 (24%), Positives = 42/122 (34%), Gaps = 23/122 (18%)

Query: 792 VLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRK--------------NKKTNGSNF 837
             +G   G G S+  IT+ T  D PS   P                     +   NG   
Sbjct: 4   GSSGNRYGPGVSTDDITVVTLSDVPSAP-PQNVSLEVVNSRSIKVSWLPPPSGTQNGFI- 61

Query: 838 KGGY------LNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIK 891
             GY             +  +   L    TGL+  + Y+ QV+A+T  G G  S   T +
Sbjct: 62  -TGYKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAE 120

Query: 892 TP 893
           TP
Sbjct: 121 TP 122

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 19 PLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITH 66
               I    L   P   P++V +  ++S ++ + W  P   T NG IT 
Sbjct: 14 VSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITG 63

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score =  140 bits (355), Expect = 4e-39
 Identities = 41/120 (34%), Positives = 60/120 (50%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++  + VRT   VP A PQN+S E  +S SI I W+PP     NG I  YK+++ +
Sbjct: 1   GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRK 60

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE 818
             R       +    Q S +++ L + TEY   V A T  G GP++  ++  T E D  E
Sbjct: 61  ASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDE 120

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score =  125 bits (315), Expect = 1e-33
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 3/127 (2%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQ 521
           G   ++  + VRT    P  AP+++ +   +S +++I W  P   T NGQITGYK+ Y +
Sbjct: 1   GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRK 60

Query: 522 DQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581
                       V        I  L   T Y  RV A T  G GP +  +  +T +    
Sbjct: 61  ASRKSDVTETL-VSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLD 119

Query: 582 QPRDLRA 588
           + R    
Sbjct: 120 ETRVPEV 126

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score = 86.6 bits (215), Expect = 3e-20
 Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 16/115 (13%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT-------- 326
           G    S    + T    P  AP+++ +   +S +++I W  P   T NGQIT        
Sbjct: 1   GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRK 60

Query: 327 ------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                        G   +  + GL   T Y   +AA +  G G  T  +   T +
Sbjct: 61  ASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFE 115

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 26/162 (16%), Positives = 44/162 (27%), Gaps = 44/162 (27%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S  V V+T   VPS                                         
Sbjct: 1   GSSGSSGDVAVRTLSDVPSAA--------------------------------------- 21

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGEN--IISYELYW--NDTYAKAKHHRRIGLVETYS 678
            P++L        ++ + W  P  + +N  I  Y++ +      +        G   +  
Sbjct: 22  -PQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQL 80

Query: 679 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
           + GL   T Y   +AA +  G G  T  +   T +       
Sbjct: 81  IEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETR 122

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score = 70.1 bits (172), Expect = 2e-14
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 202 VAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSE-ISGIITTYY 255
            AP ++ +    + S+ + W  P+       +  Y I+Y+  +  +  +E +        
Sbjct: 20  AAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQ 79

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSS 308
            +  L   TEY F + A+   G GP +      T E++     R  +V   SS
Sbjct: 80  LIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLD-ETRVPEVSGPSS 131

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score = 62.8 bits (153), Expect = 6e-12
 Identities = 26/124 (20%), Positives = 38/124 (30%), Gaps = 21/124 (16%)

Query: 799 GDGPSSYPITIRTHEDDPSEVCPTQNDFR--------------KNKKTNGS------NFK 838
           G   SS  + +RT  D PS   P                         NG        ++
Sbjct: 1   GSSGSSGDVAVRTLSDVPSAA-PQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYR 59

Query: 839 GGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPN 898
                  +   +  G  L   + GL   T Y  +VAALT  G G  +   + +T     +
Sbjct: 60  KASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLD 119

Query: 899 RPHV 902
              V
Sbjct: 120 ETRV 123

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 19 PLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITH 66
               +    L   P  AP+++ +   +S +++I W  P   T NGQIT 
Sbjct: 4  GSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITG 53

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSS 495
           L   T Y   +AA +  G G  T  +   T + +     R  +V   SS
Sbjct: 84  LDRGTEYNFRVAALTINGTGPATDWLSAETFESDLD-ETRVPEVSGPSS 131

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score =  140 bits (354), Expect = 5e-38
 Identities = 35/197 (17%), Positives = 74/197 (37%), Gaps = 7/197 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLV---ETYSLT 680
           P+    +  Q     + W +   +   I+ Y + +N ++  A        V   ++  + 
Sbjct: 9   PKLTG-ITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV 67

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEP 739
            + P   Y   + A +  G    +       T+  VP   P NV  +     ++ ISW P
Sbjct: 68  QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTP 127

Query: 740 PPVERSNGHIVYYKLQF-VETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSI 798
            P    N    +Y + +  +   +  E + +    Q + V+ +   + +Y I V+A    
Sbjct: 128 MPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDR 187

Query: 799 GDGP-SSYPITIRTHED 814
           G+   ++  +   + ED
Sbjct: 188 GESNVAAEEVVGYSGED 204

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score =  122 bits (307), Expect = 9e-32
 Identities = 39/195 (20%), Positives = 62/195 (31%), Gaps = 24/195 (12%)

Query: 200 LPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGII--TTY 254
           +P AP    I    A    + W    +    +L+Y IQ+        +      +  T  
Sbjct: 5   VPNAPKLTGI-TCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDS 63

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPA-VITTGETEPGTAPRDVQVRPLSSSTMVI 313
             V  +SP+  Y F +IA N +G  PPS+ +   TT    P   P +V  +    + +VI
Sbjct: 64  SFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVI 123

Query: 314 QWDEPETP--NGQIT---------------AKHHRRIGLVETYSLTGLYPNTLYYIWLAA 356
            W        N                     ++          +        Y I + A
Sbjct: 124 SWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVA 183

Query: 357 QSPRGEGATTPPIPV 371
            + RGE        V
Sbjct: 184 INDRGESNVAAEEVV 198

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score =  109 bits (274), Expect = 2e-27
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 7/132 (5%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP 505
           + P   Y   + A +  G    +       T+   P   P +V  +    + +VI W   
Sbjct: 69  MSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPM 128

Query: 506 ETP--NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT--TISDLTPHTIYTIRVQAFTS 561
                N     Y V + +D     +AWE   + + +     I+D      Y I+V A   
Sbjct: 129 PEIEHNAPNFHYYVSWKRDIP--AAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAIND 186

Query: 562 VGPGPLSAPVLV 573
            G   ++A  +V
Sbjct: 187 RGESNVAAEEVV 198

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 93.2 bits (232), Expect = 1e-21
 Identities = 37/230 (16%), Positives = 64/230 (27%), Gaps = 43/230 (18%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           AP+   +    +    I W++       I  Y + +    +        + V N   + +
Sbjct: 8   APKLTGIT-CQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFV 66

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVL-VKTQQGVPSQ-PRDLRAVDIQETAVTLAWS 601
             ++P   YT RV AF  +G  P SA      TQ  VP + P ++     +   + ++W+
Sbjct: 67  VQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWT 126

Query: 602 KPTHSGEN--IISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 659
                  N     Y + W               +      AW                  
Sbjct: 127 PMPEIEHNAPNFHYYVSW---------------KRDIPAAAWENNNIFDWR--------- 162

Query: 660 DTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPV 709
                              +        Y I + A + RGE        V
Sbjct: 163 --------------QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVV 198

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 84.0 bits (208), Expect = 2e-18
 Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 32/205 (15%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS-EASIVTLKN 773
           VP   P+        +    I WE      +   I++Y +QF  +    S +A+   + N
Sbjct: 5   VPN-APKLTGIT-CQADKAEIHWEQQG--DNRSPILHYTIQFNTSFTPASWDAAYEKVPN 60

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP-ITIRTHEDDPSEVCPTQNDFRKNKKT 832
             S  + ++  W  Y   V+A   IG  P S    +  T  D P +  P     +  +  
Sbjct: 61  TDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKN-PDNVVGQGTEPN 119

Query: 833 --------------NGSNFKGGYL---------NDPMRFDVSDGGALELNVTGLQPDTIY 869
                         N  NF   Y                ++ D     + +        Y
Sbjct: 120 NLVISWTPMPEIEHNAPNF--HYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKY 177

Query: 870 TIQVAALTRKGDGDRSKPETIKTPG 894
            I+V A+  +G+ + +  E +   G
Sbjct: 178 LIKVVAINDRGESNVAAEEVVGYSG 202

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 81.3 bits (201), Expect = 1e-17
 Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 8/99 (8%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSE--ISGIITT 253
              P +V        ++ + WT   E        +Y + +K       +    I      
Sbjct: 105 FKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQN 164

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVI-TTGE 291
              + +   + +Y   ++A+N+ G    ++  V+  +GE
Sbjct: 165 NIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGE 203

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 19/192 (9%), Positives = 40/192 (20%), Gaps = 58/192 (30%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNGQITA---------------KHHRRIGLVETYSL 341
           AP+   +    +    I W++       I                   + ++   ++  +
Sbjct: 8   APKLTGIT-CQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFV 66

Query: 342 TGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQ------------------------- 375
             + P   Y   + A +  G    +       T+                          
Sbjct: 67  VQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWT 126

Query: 376 -----YGKTPGFG-----------EQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 419
                    P F                 ++          +        Y I + A + 
Sbjct: 127 PMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAIND 186

Query: 420 RGEGATTPPIPV 431
           RGE        V
Sbjct: 187 RGESNVAAEEVV 198

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score =  137 bits (346), Expect = 8e-38
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 2/122 (1%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++  I  RT Q  P APPQ V C  + ST++R+SW PPP +  NG I  Y + +  
Sbjct: 1   GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEA 60

Query: 759 TGRSDSEASIV--TLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
               D    +V    +  +S+ L  L+KWTEYR+WV A T +G GP S P+ +RT ED P
Sbjct: 61  VDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVP 120

Query: 817 SE 818
           S 
Sbjct: 121 SG 122

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score =  132 bits (334), Expect = 3e-36
 Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 4/130 (3%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQ 521
           G   ++  I  RT Q  P   P+ V    + S+T+ + W  P  ++ NG IT Y V Y  
Sbjct: 1   GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEA 60

Query: 522 DQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
                        +     +  +  L   T Y + V+A T VGPGP S+PVLV+T + VP
Sbjct: 61  VDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVP 120

Query: 581 SQ-PRDLRAV 589
           S  PR + + 
Sbjct: 121 SGPPRKVESG 130

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score = 87.8 bits (218), Expect = 1e-20
 Identities = 38/170 (22%), Positives = 58/170 (34%), Gaps = 40/170 (23%)

Query: 563 GPGPLSAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAWSKPTHSGEN--IISYELYWND 619
           G    S  +  +T Q  PS  P+ +  V +  T V ++W  P     N  I  Y + +  
Sbjct: 1   GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEA 60

Query: 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSL 679
              + R    VD      +                                     ++ L
Sbjct: 61  VDGEDRGRHVVDGISREHS-------------------------------------SWDL 83

Query: 680 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLS 729
            GL   T Y +W+ A +  G G  + P+ VRT + VP  PP+ V   P S
Sbjct: 84  VGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVESGPSS 133

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score = 85.5 bits (212), Expect = 6e-20
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 18/117 (15%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT-------- 326
           G    S      T ++ P   P+ V    + S+T+ + W  P  ++ NG IT        
Sbjct: 1   GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEA 60

Query: 327 --------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                              ++ L GL   T Y +W+ A +  G G  + P+ VRT +
Sbjct: 61  VDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDE 117

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score = 84.7 bits (210), Expect = 2e-19
 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 202 VAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGII---TT 253
             P  V    + +T+VR+ W  P        +  Y + Y+          +   I    +
Sbjct: 20  APPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHS 79

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLS 307
            + +  L  +TEY  ++ A  ++G GP SSP ++ T E  P   PR V+  P S
Sbjct: 80  SWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVESGPSS 133

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 28/128 (21%), Positives = 38/128 (29%), Gaps = 23/128 (17%)

Query: 799 GDGPSSYPITIRTHEDDPSEVCPTQNDFR--------------KNKKTNGS--------N 836
           G   SS  I  RT +  PS   P +                       NG          
Sbjct: 1   GSSGSSGTIEARTAQSTPSAP-PQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYE 59

Query: 837 FKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGV 896
              G        D         ++ GL+  T Y + V A T  G G  S P  ++T   V
Sbjct: 60  AVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDV 119

Query: 897 PNRPHVNL 904
           P+ P   +
Sbjct: 120 PSGPPRKV 127

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 17/48 (35%), Positives = 24/48 (50%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS 494
           L   T Y +W+ A +  G G  + P+ VRT +  P   PR V+  P S
Sbjct: 86  LEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVESGPSS 133

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 19 PLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT 65
               I      + P   P+ V    + S+T+ + W  P  ++ NG IT
Sbjct: 4  GSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVIT 52

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score =  129 bits (326), Expect = 2e-35
 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 2/117 (1%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++    + + Q  P  AP +V V+ LSSS + + W+        +  Y++ Y    
Sbjct: 1   GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHV--LEKIVESYQIRYWAAH 58

Query: 524 SLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
               +A   QV        + +L P T Y I V A  S G GP S  +   T++   
Sbjct: 59  DKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score =  117 bits (294), Expect = 5e-31
 Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 5/119 (4%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++    + + Q  P   P  V  + LSS+ I + WE          +  Y++++  
Sbjct: 1   GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVL----EKIVESYQIRYWA 56

Query: 759 TGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
               +  A+ V +   + S  L+ L   T+Y I V A  S G GP S  I   T +   
Sbjct: 57  AHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 87.8 bits (218), Expect = 7e-21
 Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 17/114 (14%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT---------- 326
           G    S  AVI + +  P  AP +V V+ LSSS + + W+        +           
Sbjct: 1   GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHV--LEKIVESYQIRYWAAH 58

Query: 327 -----AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                A   +      +  L  L P+T Y+I + A +  G G  +  I   TK+
Sbjct: 59  DKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKK 112

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 65.8 bits (161), Expect = 3e-13
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 3/96 (3%)

Query: 202 VAPLDVKISEVTATSVRLDWTYPSE-TLLYYVIQYKPKAANTPYSEISGIIT--TYYTVR 258
            AP +V +  ++++ + + W +  E  +  Y I+Y         +    + +      + 
Sbjct: 20  EAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLE 79

Query: 259 NLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
           NL P T+Y   + A N+ G GPPS      T +   
Sbjct: 80  NLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 62.4 bits (152), Expect = 7e-12
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 47/162 (29%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S   ++ + Q  PS+                                        
Sbjct: 1   GSSGSSGVAVINSAQDAPSEA--------------------------------------- 21

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI---GLVETYSL 679
            P ++    +  + +++ W       + + SY++ +   + K +   R+       +  L
Sbjct: 22  -PTEVGVKVLSSSEISVHWEHVLE--KIVESYQIRYWAAHDKEEAANRVQVTSQEYSARL 78

Query: 680 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721
             L P+T Y+I + A +  G G  +  I   TK+     P  
Sbjct: 79  ENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG--PSS 118

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 56.6 bits (137), Expect = 6e-10
 Identities = 20/115 (17%), Positives = 29/115 (25%), Gaps = 16/115 (13%)

Query: 799 GDGPSSYPITIRTHEDDPSE---------VCPTQNDFRKNKKTNGSN-------FKGGYL 842
           G   SS    I + +D PSE         +  ++                    +     
Sbjct: 1   GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDK 60

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
            +               +  L PDT Y I+V A    G G  S      T     
Sbjct: 61  EEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 2/47 (4%)

Query: 19 PLPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT 65
              +         P  AP +V V+ LSSS + + W+        + 
Sbjct: 4  GSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHV--LEKIVE 48

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score =  141 bits (355), Expect = 2e-35
 Identities = 49/302 (16%), Positives = 86/302 (28%), Gaps = 54/302 (17%)

Query: 422 EGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGA--TTPPIPVRTKQY 479
           E             +            P         A S   E      P  P      
Sbjct: 272 EKVEDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQDPASMPCT 331

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQ---------DQSLPMSA 529
            P +AP  +       + + ++W  P+   G +   Y V   Q              +  
Sbjct: 332 RPPSAPHYLTAVG-MGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRY 390

Query: 530 WETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAV 589
            E          T+SDL PH  YT  V+A   V     S      +     ++P  +R  
Sbjct: 391 SEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLE 450

Query: 590 DIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGE 649
               T+++++WS P      +  YE+ +        D  + +++ T              
Sbjct: 451 GRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKG----DSNSYNVRRTEGF----------- 495

Query: 650 NIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPV 709
                                     + +L  L P+T Y + + A +  G+GA +     
Sbjct: 496 --------------------------SVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEF 529

Query: 710 RT 711
           +T
Sbjct: 530 QT 531

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score =  129 bits (325), Expect = 2e-31
 Identities = 36/235 (15%), Positives = 72/235 (30%), Gaps = 35/235 (14%)

Query: 166 TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPS 225
           +     +C                         T P +      +      V L WT P 
Sbjct: 305 SPEGATSCECEEGFFRAPQDPASMPC-------TRPPSAPHYLTAVGMGAKVELRWTPPQ 357

Query: 226 ET----LLYYVIQYKPKAANTPYSEIS-----------GIITTYYTVRNLSPYTEYEFYI 270
           ++     + Y +  +     +                 G+  T  TV +L P+  Y F +
Sbjct: 358 DSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTV 417

Query: 271 IAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA--- 327
            A N +     S      +        P  V++   S++++ + W  P     ++     
Sbjct: 418 EARNGVSGLVTSRSFRTASVSINQT-EPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEV 476

Query: 328 ---------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
                     ++ R     + +L  L P+T Y + + A +  G+GA +     +T
Sbjct: 477 TYRKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQT 531

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score =  127 bits (320), Expect = 6e-31
 Identities = 49/336 (14%), Positives = 92/336 (27%), Gaps = 38/336 (11%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL 540
                      P     +  +W  P        GY+      Q+     ++ +  ++  L
Sbjct: 237 DHAVVPPGGEEPRMHCAVDGEWLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCL 296

Query: 541 TTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAW 600
                  P        +        P     +  T+   P               V L W
Sbjct: 297 ECPEHTLPSPEGATSCECEEGFFRAPQDPASMPCTR---PPSAPHYLTAVGMGAKVELRW 353

Query: 601 SKPTHS-GENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN 659
           + P  S G   I Y +     + +  +    +               S            
Sbjct: 354 TPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTS------------ 401

Query: 660 DTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
                             +++ L P+  Y   + A++      T+      +        
Sbjct: 402 -----------------VTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQT-E 443

Query: 720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVL 779
           P  V  E  S+TS+ +SW  PP       +  Y++ + +     +  ++   +   S  L
Sbjct: 444 PPKVRLEGRSTTSLSVSWSIPP--PQQSRVWKYEVTYRKK-GDSNSYNVRRTEG-FSVTL 499

Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDD 815
           D+L   T Y + V A T  G G  S     +T   +
Sbjct: 500 DDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score =  113 bits (284), Expect = 2e-26
 Identities = 45/281 (16%), Positives = 79/281 (28%), Gaps = 34/281 (12%)

Query: 641 WSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 700
           W  P   G+ +        +   +A          + S     P         A S   E
Sbjct: 258 WLVPI--GQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECE 315

Query: 701 GA--TTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
                 P  P       P + P  ++        + + W PP  +      + Y +   +
Sbjct: 316 EGFFRAPQDPASMPCTRPPSAPHYLTAVG-MGAKVELRWTPP-QDSGGREDIVYSVTCEQ 373

Query: 759 TGRSDSEAS----------IVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPIT 808
                 E                  +TS  + +L+    Y   V A   +    +S    
Sbjct: 374 CWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFR 433

Query: 809 IRTHEDDPSEVCPTQNDFRKNK----------KTNGSNFKGGY------LNDPMRFDVSD 852
             +   + +E    + + R                   +   Y        D   ++V  
Sbjct: 434 TASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVW--KYEVTYRKKGDSNSYNVRR 491

Query: 853 GGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
                + +  L PDT Y +QV ALT++G G  SK    +T 
Sbjct: 492 TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTL 532

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score =  112 bits (280), Expect = 7e-26
 Identities = 47/315 (14%), Positives = 80/315 (25%), Gaps = 23/315 (7%)

Query: 279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP----------ETPNGQITAK 328
           G  +       G              P     +  +W  P          E       A 
Sbjct: 222 GSDAPSLATVAGTCVDHAVVPPGGEEPRMHCAVDGEWLVPIGQCLCQAGYEKVEDACQAC 281

Query: 329 HHRRIGLVETYSLTGLYPNTLYYIWLAAQS---PRGEGATTPPIPVRTKQYGKTPGFGEQ 385
                    + S     P         A S     G                 +      
Sbjct: 282 SPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLT 341

Query: 386 AAKHHRRIGLV-ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVR---TKQYGKTPG 441
           A     ++ L       +G   + +Y +      P           VR            
Sbjct: 342 AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTS 401

Query: 442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQ 501
                L P+  Y   + A++      T+      +        P  V++   S++++ + 
Sbjct: 402 VTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQT-EPPKVRLEGRSTTSLSVS 460

Query: 502 WDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFT 560
           W  P     ++  Y+V Y         +    V      + T+ DL P T Y ++VQA T
Sbjct: 461 WSIPPPQQSRVWKYEVTY----RKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALT 516

Query: 561 SVGPGPLSAPVLVKT 575
             G G  S     +T
Sbjct: 517 QEGQGAGSKVHEFQT 531

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score = 44.4 bits (104), Expect = 1e-04
 Identities = 9/51 (17%), Positives = 14/51 (27%)

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
                   + V+ L+P   YT  V A         S+     +       P
Sbjct: 394 PHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEP 444

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score =  127 bits (322), Expect = 7e-35
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 4/119 (3%)

Query: 703 TTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRS 762
           ++    + T++  P  PP +V+ +P++S SI+++W+ P  E  NG I  Y++ + E    
Sbjct: 2   SSGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPG 61

Query: 763 D----SEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
                S   +    +   + LD LKK+ +Y + V A    G GPSS  I   T E  PS
Sbjct: 62  SNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPS 120

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score =  123 bits (311), Expect = 2e-33
 Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 5/119 (4%)

Query: 468 TTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSL 525
           ++    + T++  P   P DV ++P++S ++ + W  P  E  NG I GY++ Y ++   
Sbjct: 2   SSGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPG 61

Query: 526 PMSAWETQVVD---NNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581
               +    +    ++++ T+ +L     Y + VQAF   G GP S+ +   T +  PS
Sbjct: 62  SNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPS 120

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score = 82.4 bits (204), Expect = 7e-19
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 20/115 (17%)

Query: 281 PSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT------------ 326
            S  + I+T E  P   P DV ++P++S ++ + W  P  E  NG I             
Sbjct: 2   SSGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPG 61

Query: 327 ------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                     +  G  E Y+L  L     Y + + A +  G G ++  I   T +
Sbjct: 62  SNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLE 116

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score = 74.3 bits (183), Expect = 5e-16
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 10/105 (9%)

Query: 203 APLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGIIT----- 252
            P+DV +  VT+ S+++ W  P +      +  Y I Y+  +  +        +      
Sbjct: 18  PPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDS 77

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
             YT+ NL  + +Y   + A N  G GP SS    TT E+ P + 
Sbjct: 78  EVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPSSG 122

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score = 65.1 bits (159), Expect = 9e-13
 Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 41/158 (25%)

Query: 565 GPLSAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAWSKPTHSGEN--IISYEL-YWNDT 620
           G  S    + T++  P   P D+    +   ++ + W  P    +N  I  Y++ Y  ++
Sbjct: 1   GS-SGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENS 59

Query: 621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLT 680
                    V+++ T                                    G  E Y+L 
Sbjct: 60  PGSNGQYSIVEMKAT------------------------------------GDSEVYTLD 83

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA 718
            L     Y + + A +  G G ++  I   T +  P +
Sbjct: 84  NLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPSS 121

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 11/47 (23%), Positives = 16/47 (34%)

Query: 851 SDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           + G +    +  L+    Y + V A  R G G  S      T    P
Sbjct: 73  ATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGP 119

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 32 EPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT 65
           P   P DV ++P++S ++ + W  P  E  NG I 
Sbjct: 14 APDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIR 49

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score =  126 bits (318), Expect = 3e-33
 Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 23/197 (11%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITT 253
           +  P  P D+K+ EVT TSV L W  P       +  Y+++ +        +  +    T
Sbjct: 3   MDTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKT 62

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVI 313
            + V  L     Y F ++A N  G G P+  A        P   P  + +  ++ +++ +
Sbjct: 63  SWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPL-PPGKITLMDVTRNSVSL 121

Query: 314 QWDEPETPNG-QIT--------------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQS 358
            W++PE   G +I               A        V   ++TGL     Y   ++AQ+
Sbjct: 122 SWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT--VKVTEATITGLIQGEEYSFRVSAQN 179

Query: 359 PRGEGATTPPI-PVRTK 374
            +G         PV  K
Sbjct: 180 EKGISDPRQLSVPVIAK 196

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score =  114 bits (288), Expect = 3e-29
 Identities = 40/193 (20%), Positives = 70/193 (36%), Gaps = 6/193 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHS-GENIISYELYWNDTYAKAKHHRRIGLVET-YSLTG 681
           P+DL+  ++ +T+VTL W  P    G  I +Y +   ++  KA         +T + +  
Sbjct: 9   PQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQ 68

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPP 741
           L     YY  + A++  G G              P  PP  ++   ++  S+ +SWE P 
Sbjct: 69  LQEGCSYYFRVLAENEYGIGLPAETAESVKASERPL-PPGKITLMDVTRNSVSLSWEKPE 127

Query: 742 VERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG 801
                  I+ Y ++    G    + +       T   +  L +  EY   V A    G  
Sbjct: 128 -HDGGSRILGYIVEMQTKG--SDKWATCATVKVTEATITGLIQGEEYSFRVSAQNEKGIS 184

Query: 802 PSSYPITIRTHED 814
                      +D
Sbjct: 185 DPRQLSVPVIAKD 197

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score =  108 bits (273), Expect = 3e-27
 Identities = 45/236 (19%), Positives = 79/236 (33%), Gaps = 49/236 (20%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           PG  P+D++V+ ++ +++ + WD P    G  I  Y V   +       A+ T   + ++
Sbjct: 6   PG-PPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTR---KAYSTVATNCHK 61

Query: 540 LT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTL 598
            +  +  L     Y  RV A    G G  +           P  P  +  +D+   +V+L
Sbjct: 62  TSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSL 121

Query: 599 AWSKPTHSG-ENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY 657
           +W KP H G   I+ Y +                           +   S +        
Sbjct: 122 SWEKPEHDGGSRILGYIVEM-------------------------QTKGSDKWATCAT-- 154

Query: 658 WNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI-PVRTK 712
                           V   ++TGL     Y   ++AQ+ +G         PV  K
Sbjct: 155 --------------VKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVIAK 196

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score =  101 bits (254), Expect = 1e-24
 Identities = 27/125 (21%), Positives = 43/125 (34%), Gaps = 5/125 (4%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           L     YY  + A++  G G              P   P  + +  ++ +++ + W++PE
Sbjct: 69  LQEGCSYYFRVLAENEYGIGLPAETAESVKASERPL-PPGKITLMDVTRNSVSLSWEKPE 127

Query: 507 TPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPG 565
              G +I GY V      S     W T         TI+ L     Y+ RV A    G  
Sbjct: 128 HDGGSRILGYIVEMQTKGS---DKWATCATVKVTEATITGLIQGEEYSFRVSAQNEKGIS 184

Query: 566 PLSAP 570
                
Sbjct: 185 DPRQL 189

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score = 89.3 bits (222), Expect = 2e-20
 Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 27/199 (13%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASIVTLK 772
            PG PPQ++  + ++ TS+ ++W+PP     +G   I  Y ++  E+ R           
Sbjct: 5   TPG-PPQDLKVKEVTKTSVTLTWDPP---LLDGGSKIKNYIVEKRESTRKAYSTVATNCH 60

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKT 832
            +TS+ +D+L++   Y   VLA    G G  +         + P    P +       + 
Sbjct: 61  -KTSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLP--PGKITLMDVTRN 117

Query: 833 -----------NGSNFKGGYL------NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAA 875
                      +G +   GY+              +     E  +TGL     Y+ +V+A
Sbjct: 118 SVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATVKVTEATITGLIQGEEYSFRVSA 177

Query: 876 LTRKGDGDRSKP-ETIKTP 893
              KG  D  +    +   
Sbjct: 178 QNEKGISDPRQLSVPVIAK 196

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 10/51 (19%), Positives = 15/51 (29%)

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
            ++       V  LQ    Y  +V A    G G  ++          P  P
Sbjct: 56  ATNCHKTSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPP 106

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score =  124 bits (313), Expect = 2e-32
 Identities = 37/215 (17%), Positives = 78/215 (36%), Gaps = 25/215 (11%)

Query: 90  AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELT 148
           A +   V        P+     P  +     + +N++C     P   + W + GQ +  +
Sbjct: 5   AASSALVPRGSHMYAPKLQ--GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSS 62

Query: 149 PDDKLPV----GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPV 202
               + +      + L +   +E++  NY C A + +G      I+            P 
Sbjct: 63  NYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQA-------DTPS 115

Query: 203 APLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEI----SGIITTY 254
           +P  +   E  +++ ++ +  P  T    +L Y  +++       +S+        +   
Sbjct: 116 SP-SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGI 174

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
            T+  L P T Y   + A+N  G G  S+ +   T
Sbjct: 175 VTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 209

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 67.5 bits (165), Expect = 7e-13
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKV-YYTQDQSLPMSAWET-QVVD 536
           +  ++P   QV P  SST  +Q+DEPE   G  I  YK  +    + +  S W   +   
Sbjct: 112 DTPSSPSIDQVEP-YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 170

Query: 537 NNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
              + TI  L P T Y +R+ A    G G +SA    KTQ
Sbjct: 171 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 210

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 60.2 bits (146), Expect = 3e-10
 Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 5/100 (5%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKN-- 773
             + P     EP  S++ ++ ++ P        I+ YK ++   G     +     K   
Sbjct: 113 TPSSPSIDQVEP-YSSTAQVQFDEPEAT-GGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 170

Query: 774 -QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTH 812
            +    +  LK  T Y + + A    G G  S     +T 
Sbjct: 171 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 210

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKP-THSGENIISYELYWNDTYAKAKHHRRIGLVE-----TY 677
              +  V+   +   + + +P    G  I+ Y+  W     +  H +     E       
Sbjct: 116 SPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIV 175

Query: 678 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
           ++ GL P T Y + LAA + +G G  +     +T+
Sbjct: 176 TIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 210

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 23/123 (18%)

Query: 270 IIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG------ 323
             AVN +G             + +  ++P   QV P  SST  +Q+DEPE   G      
Sbjct: 93  CTAVNRIG----QESLEFILVQADTPSSPSIDQVEP-YSSTAQVQFDEPEATGGVPILKY 147

Query: 324 ------------QITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPV 371
                              +   +    ++ GL P T Y + LAA + +G G  +     
Sbjct: 148 KAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEF 207

Query: 372 RTK 374
           +T+
Sbjct: 208 KTQ 210

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score =  120 bits (303), Expect = 2e-32
 Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 476 TKQYEPGTAPRDVQV--RPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ 533
           +    P +AP+D+ V  R      +++ W  P   NG+IT Y ++YT D+++P+  W  +
Sbjct: 3   SGSSGPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIME 62

Query: 534 VVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
            +  ++LT  I DL   T+Y  R+QA  S G GPLS P+L +T +   
Sbjct: 63  TISGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSG 110

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 89.8 bits (223), Expect = 1e-21
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 711 TKQYVPGAPPQN--VSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG-RSDSEAS 767
           +    P + P++  V        ++ +SW+PP    +NG I  Y L +         +  
Sbjct: 3   SGSSGPTSAPKDLTVITREGKPRAVIVSWQPP--LEANGKITAYILFYTLDKNIPIDDWI 60

Query: 768 IVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
           + T+  ++ +  + +L   T Y   + A  S G GP S PI  RT +   
Sbjct: 61  METISGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSG 110

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 72.4 bits (178), Expect = 1e-15
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 18/106 (16%)

Query: 288 TTGETEPGTAPRDVQV--RPLSSSTMVIQWDEPETPNGQIT----------------AKH 329
           ++G + P +AP+D+ V  R      +++ W  P   NG+IT                   
Sbjct: 2   SSGSSGPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIM 61

Query: 330 HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
               G   T+ +  L  +T+YY  + A++ +G G  + PI  RT +
Sbjct: 62  ETISGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLK 107

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 66.6 bits (163), Expect = 2e-13
 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 8/102 (7%)

Query: 201 PVAPLDVKIS--EVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIIT--- 252
             AP D+ +   E    +V + W  P E    +  Y++ Y           I   I+   
Sbjct: 9   TSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDR 68

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
             + + +L+  T Y F I A N+ G GP S P +  T +   
Sbjct: 69  LTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSG 110

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 6/101 (5%)

Query: 622 AKPRDLRAVDIQ--ETAVTLAWSKPTHSGENIISYELYW----NDTYAKAKHHRRIGLVE 675
           + P+DL  +  +    AV ++W  P  +   I +Y L++    N            G   
Sbjct: 10  SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRL 69

Query: 676 TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVP 716
           T+ +  L  +T+YY  + A++ +G G  + PI  RT +   
Sbjct: 70  THQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSG 110

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 25/119 (21%)

Query: 795 GTSIGDGPSSYP--ITIRTHEDDPSEVC-----PTQND---------FRKNKKTNGSNFK 838
           G+S   GP+S P  +T+ T E  P  V      P + +         +  +K     ++ 
Sbjct: 1   GSSGSSGPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWI 60

Query: 839 GGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
                     +   G  L   +  L  DT+Y  ++ A   KG G  S P   +T     
Sbjct: 61  ---------METISGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSG 110

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 42.8 bits (101), Expect = 5e-05
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 26 GYILVTEPGTAPRDVQV--RPLSSSTMVIQWDEPETPNGQIT 65
          G    + P +AP+D+ V  R      +++ W  P   NG+IT
Sbjct: 1  GSSGSSGPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKIT 42

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score =  119 bits (300), Expect = 8e-32
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)

Query: 458 AAQSPRGEGA-TTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYK 516
            +    G+G+ + PPI  RT    PG  P  +    + ++++ + W  P  PNG I  Y+
Sbjct: 4   GSSGRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQ 62

Query: 517 VYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           + +  + +   +A    +  + +  T + L P ++Y  R+ A T  G G  +  ++V T+
Sbjct: 63  ITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 122

Query: 577 Q-GVPS 581
           +   PS
Sbjct: 123 KRSGPS 128

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score =  110 bits (277), Expect = 1e-28
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 5/126 (3%)

Query: 693 AAQSPRGEGA-TTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVY 751
            +    G+G+ + PPI  RT   VPG PP  +    + +TS+R+ W+PP     NG I+ 
Sbjct: 4   GSSGRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPP--AAPNGIILA 60

Query: 752 YKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIR 810
           Y++       + + A++  L  +   +    LK  + Y   + A T  G G ++  + + 
Sbjct: 61  YQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVT 120

Query: 811 THEDDP 816
           T +   
Sbjct: 121 TEKRSG 126

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 90.2 bits (224), Expect = 2e-21
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 17/120 (14%)

Query: 272 AVNNLGRGPPSSPAV-ITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT---- 326
           +   +G G PS P +   T +  PG  P  +    + ++++ + W  P  PNG I     
Sbjct: 5   SSGRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQI 63

Query: 327 -----------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                      A           Y+ TGL P ++Y   + AQ+ +G G     + V T++
Sbjct: 64  THRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEK 123

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 80.9 bits (200), Expect = 3e-18
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 41/166 (24%)

Query: 556 VQAFTSVGPGPLS-APVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYE 614
             +   +G G  S  P+L +T   VP  P  +   +++ T+V L W  P      I++Y+
Sbjct: 3   SGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQ 62

Query: 615 LYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLV 674
           +                 +    T   +       +   Y                    
Sbjct: 63  IT---------------HRLNTTTANTATVEVLAPSARQYTA------------------ 89

Query: 675 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
                TGL P ++Y   + AQ+ +G G     + V T++     P 
Sbjct: 90  -----TGLKPESVYLFRITAQTRKGWGEAAEALVVTTEK--RSGPS 128

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 77.1 bits (190), Expect = 5e-17
 Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 10/129 (7%)

Query: 172 TCIAASVLGV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET--- 227
           +  ++  +G    +   +  +         P  P+ +   EV  TSVRL W  P+     
Sbjct: 2   SSGSSGRIGDGSPSHPPILERTLDDV----PGPPMGILFPEVRTTSVRLIWQPPAAPNGI 57

Query: 228 LLYYVIQYKP--KAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPA 285
           +L Y I ++     ANT   E+       YT   L P + Y F I A    G G  +   
Sbjct: 58  ILAYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEAL 117

Query: 286 VITTGETEP 294
           V+TT +   
Sbjct: 118 VVTTEKRSG 126

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 18/118 (15%)

Query: 794 AGTSIGDG-PSSYPITIRTHEDDPSEVC-PTQNDFRKN---------KKTNG-------S 835
           +   IGDG PS  PI  RT +D P         + R              NG       +
Sbjct: 5   SSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQIT 64

Query: 836 NFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
           +       +    +V    A +   TGL+P+++Y  ++ A TRKG G+ ++   + T 
Sbjct: 65  HRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 122

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 33 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITH 66
          PG  P  +    + ++++ + W  P  PNG I  
Sbjct: 28 PG-PPMGILFPEVRTTSVRLIWQPPAAPNGIILA 60

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score =  118 bits (297), Expect = 2e-31
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 3/111 (2%)

Query: 476 TKQYEPGTAPRDVQVRPLSSSTMVIQWD--EPETPNGQITGYKVYYTQDQSLPMSAWETQ 533
           +    P   P       ++ +T++++W        N  I G+ +YY    S   S ++  
Sbjct: 3   SGSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD 62

Query: 534 VVDNNQL-TTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
           +V+ ++   +IS L P T Y I++Q F   G    S  ++ +T+       
Sbjct: 63  MVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSGPSS 113

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score = 99.5 bits (248), Expect = 6e-25
 Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 2/108 (1%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG-RSDSEASIV 769
           +    P A P     + ++ T+I + W   P   +N  I  + + +  T   +DS+    
Sbjct: 3   SGSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD 62

Query: 770 TLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
            ++ ++    +  L+  T Y I +      G+   S  +   T     
Sbjct: 63  MVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score = 72.1 bits (177), Expect = 2e-15
 Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 18/106 (16%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWD--EPETPNGQIT----------------AKH 329
           ++G + P   P       ++ +T++++W        N  I                  K 
Sbjct: 2   SSGSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKK 61

Query: 330 HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
               G    +S++ L P T Y I +   +  GE   +  +   TK 
Sbjct: 62  DMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 107

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score = 69.4 bits (170), Expect = 2e-14
 Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 8/102 (7%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGII---T 252
              P       V  T++ L W Y   +     +  + I Y+P  ++        ++    
Sbjct: 9   VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDR 68

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
            ++++ +L P T Y+  +   N  G    S+  +  T     
Sbjct: 69  YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score = 58.3 bits (141), Expect = 2e-10
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 622 AKPRDLRAVDIQETAVTLAWSK--PTHSGENIISYELYW----NDTYAKAKHHRRIGLVE 675
           A P       + ET + L W     +++   I  + +Y+    +D  +  K     G   
Sbjct: 10  AGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRY 69

Query: 676 TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ-YVPGA 718
            +S++ L P T Y I +   +  GE   +  +   TK    P +
Sbjct: 70  WHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSGPSS 113

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score = 51.3 bits (123), Expect = 5e-08
 Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 25/119 (21%)

Query: 795 GTSIGDGPSSYPITIRTHEDDPSEV--------CPTQN--------DFRKNKKTNGSNFK 838
           G+S   GP + P    T   + + +            N         +R     N S++K
Sbjct: 1   GSSGSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYK 60

Query: 839 GGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
                     D+ +G     +++ LQP+T Y I++      G+ + S     +T     
Sbjct: 61  ---------KDMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score = 42.1 bits (99), Expect = 8e-05
 Identities = 6/37 (16%), Positives = 13/37 (35%), Gaps = 2/37 (5%)

Query: 32 EPGTAPRDVQVRPLSSSTMVIQWD--EPETPNGQITH 66
           P   P       ++ +T++++W        N  I  
Sbjct: 7  GPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHG 43

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score =  117 bits (296), Expect = 2e-31
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 4/122 (3%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQV-RPLSSSTMVIQWDEP--ETPNGQITGYKVYYT 520
           G   ++  I   T +  P  AP +V V    SS  + I+W +P  +  +G++ GY++ + 
Sbjct: 1   GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHV 60

Query: 521 QDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT-QQGV 579
              +        +V  N     IS    +   T+R+ A T  G GP S PV +       
Sbjct: 61  WQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHSG 120

Query: 580 PS 581
           PS
Sbjct: 121 PS 122

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score =  112 bits (283), Expect = 2e-29
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 2/120 (1%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCE-PLSSTSIRISWEPPPVERSNGHIVYYKLQFV 757
           G   ++  I   T +  P   P NV+     SS ++ I W  PP ++ +G +V Y++  V
Sbjct: 1   GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHV 60

Query: 758 ETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
                 S+  +  +  N +   +          + + A T  G GP S P+ I       
Sbjct: 61  WQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHSG 120

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 72.9 bits (179), Expect = 1e-15
 Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 18/115 (15%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQV-RPLSSSTMVIQWDEP--ETPNGQIT------- 326
           G    S   + +T E  P  AP +V V    SS  + I+W +P  +  +G++        
Sbjct: 1   GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHV 60

Query: 327 --------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
                                 ++    N    + +AA +  G G  + P+ +  
Sbjct: 61  WQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFI 115

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 56.7 bits (137), Expect = 8e-10
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 9/105 (8%)

Query: 202 VAPLDVKISE-VTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGII--TT 253
           VAPL+V +    ++ +V + W  P        L+ Y I +  ++A      +  +    +
Sbjct: 20  VAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGS 79

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGETEPGTA 297
              +            I AV   G GP S P  +     + P + 
Sbjct: 80  RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHSGPSSG 124

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 25/123 (20%), Positives = 35/123 (28%), Gaps = 27/123 (21%)

Query: 799 GDGPSSYPITIRTHEDDPSEVCPTQNDFRKN---------------KKTNGSNFKGGY-- 841
           G   SS  I   T E  PS   P       N               K+ +G     GY  
Sbjct: 1   GSSGSSGWILASTTEGAPSVA-PLNVTVFLNESSDNVDIRWMKPPTKQQDGELV--GYRI 57

Query: 842 -------LNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPG 894
                         +          ++    +   T+++AA+TR G G  S P  I  P 
Sbjct: 58  SHVWQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPA 117

Query: 895 GVP 897
              
Sbjct: 118 HSG 120

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 21/166 (12%), Positives = 45/166 (27%), Gaps = 49/166 (29%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S  +L  T +G PS                                         
Sbjct: 1   GSSGSSGWILASTTEGAPSVA--------------------------------------- 21

Query: 623 KPRDLRA-VDIQETAVTLAWSKPTHSGEN--IISYELYW---NDTYAKAKHHRRIGLVET 676
            P ++   ++     V + W KP    ++  ++ Y +     +   +K            
Sbjct: 22  -PLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSR 80

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
             ++    N    + +AA +  G G  + P+ +        + P +
Sbjct: 81  ARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIP---AHSGPSS 123

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score =  117 bits (295), Expect = 4e-31
 Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 7/121 (5%)

Query: 704 TPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG--- 760
           +      + + +P   P NV    ++ST   + W+P P++   GH+  Y++ + +T    
Sbjct: 2   SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSS 61

Query: 761 ----RSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
               R   +  +    ++T  +L  L+ ++ Y + V      G+GP+S      T E   
Sbjct: 62  KRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSG 121

Query: 817 S 817
            
Sbjct: 122 P 122

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score =  108 bits (271), Expect = 7e-28
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 8/121 (6%)

Query: 469 TPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLP 526
           +      + +  P  AP +V+V  ++S+   + WD    ++  G + GY++YY + QS  
Sbjct: 2   SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSS 61

Query: 527 MSAW-----ETQVVDNNQL-TTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
                    +      ++    +  L P + YT+ V+     G GP S   +  T +G  
Sbjct: 62  KRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSG 121

Query: 581 S 581
            
Sbjct: 122 P 122

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score = 74.4 bits (183), Expect = 5e-16
 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 23/117 (19%)

Query: 282 SSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT------------- 326
           SS +   +GE  P  AP +V+V  ++S+   + WD    ++  G +              
Sbjct: 2   SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSS 61

Query: 327 --------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                    K     G      L GL P + Y + +   + +GEG  +P     T +
Sbjct: 62  KRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPE 118

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score = 65.1 bits (159), Expect = 7e-13
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 13/109 (11%)

Query: 202 VAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGII----- 251
           VAP +V+++ V +T   + W           L  Y I Y    +++  +           
Sbjct: 16  VAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTF 75

Query: 252 ---TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
               T+  +  L P++ Y   +  VN  G GP S   V  T E    ++
Sbjct: 76  QGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPSS 124

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score = 60.1 bits (146), Expect = 4e-11
 Identities = 22/156 (14%), Positives = 45/156 (28%), Gaps = 37/156 (23%)

Query: 568 SAPVLVKTQQGVPSQ-PRDLRAVDIQETAVTLAWSKPTHSGEN--IISYEL-YWNDTYAK 623
           S+     + + +P   P ++R   +  T   + W           +  Y + YW    + 
Sbjct: 2   SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSS 61

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
            R+ R ++ +                                      G      L GL 
Sbjct: 62  KRNRRHIEKKILTFQ---------------------------------GSKTHGMLPGLE 88

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
           P + Y + +   + +GEG  +P     T +    + 
Sbjct: 89  PFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPSS 124

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score = 57.8 bits (140), Expect = 3e-10
 Identities = 16/67 (23%), Positives = 25/67 (37%)

Query: 831 KTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETI 890
               S+ K    +   +     G      + GL+P + YT+ V  +  KG+G  S     
Sbjct: 55  WKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVF 114

Query: 891 KTPGGVP 897
            TP G  
Sbjct: 115 NTPEGSG 121

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 32 EPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT 65
           P  AP +V+V  ++S+   + WD    ++  G + 
Sbjct: 13 LPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQ 48

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score =  120 bits (302), Expect = 5e-31
 Identities = 32/198 (16%), Positives = 69/198 (34%), Gaps = 24/198 (12%)

Query: 195 APL--LTLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEI- 247
           APL     P +P  +   E  +++ ++ +  P  T    +L Y  +++       +S+  
Sbjct: 1   APLAQADTPSSP-SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY 59

Query: 248 ---SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVR 304
                 +    T+  L P T Y   + A+N  G G  S+ +   T      +AP+     
Sbjct: 60  DAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQM 119

Query: 305 PLSSSTMVIQWDEPETPNGQIT-------------AKHHRRIGLVETYSLTGLYPNTLYY 351
               +++ +   + +     I                  R     +   L  L  N  Y 
Sbjct: 120 GEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYE 179

Query: 352 IWLAAQSPRGEGATTPPI 369
           +++ A++ +G+      +
Sbjct: 180 VYVVAENQQGKSKAAHFV 197

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score =  114 bits (288), Expect = 4e-29
 Identities = 47/235 (20%), Positives = 78/235 (33%), Gaps = 45/235 (19%)

Query: 477 KQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQS-LPMSAWETQV 534
            Q +  ++P   QV P  SST  +Q+DEPE   G  I  YK  +      +  S W    
Sbjct: 4   AQADTPSSPSIDQVEP-YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK 62

Query: 535 VDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ-QGVPSQPRDLRAVDIQ 592
             + +   TI  L P T Y +R+ A    G G +SA    KTQ    PS P+    +   
Sbjct: 63  EASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGED 122

Query: 593 ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENII 652
             ++ +   K    G  I  Y + +    ++ +    +                      
Sbjct: 123 GNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSD----------------- 165

Query: 653 SYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI 707
                                     L  L  N  Y +++ A++ +G+      +
Sbjct: 166 -----------------------HVMLKSLDWNAEYEVYVVAENQQGKSKAAHFV 197

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score =  107 bits (270), Expect = 8e-27
 Identities = 32/188 (17%), Positives = 74/188 (39%), Gaps = 9/188 (4%)

Query: 627 LRAVDIQETAVTLAWSKPTHS-GENIISYELYW----NDTYAKAKHHRRIGLVET-YSLT 680
           +  V+   +   + + +P  + G  I+ Y+  W     + +    +  +   +E   ++ 
Sbjct: 14  IDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIV 73

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPP 740
           GL P T Y + LAA + +G G  +     +T+     + P+          SI+++    
Sbjct: 74  GLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQ 133

Query: 741 PVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGD 800
             +     I +Y +++     S+ +  I         +L  L    EY ++V+A    G 
Sbjct: 134 --DDGGSPIRHYLVRYRALS-SEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGK 190

Query: 801 GPSSYPIT 808
             +++ + 
Sbjct: 191 SKAAHFVF 198

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score = 98.3 bits (245), Expect = 2e-23
 Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           L P T Y + LAA + +G G  +     +T+     +AP+         +++ +   + +
Sbjct: 75  LKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQD 134

Query: 507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT--TISDLTPHTIYTIRVQAFTSVGP 564
                I  Y V Y        S W+ ++   +      +  L  +  Y + V A    G 
Sbjct: 135 DGGSPIRHYLVRYRALS----SEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGK 190

Query: 565 GPLSAPV 571
              +  V
Sbjct: 191 SKAAHFV 197

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score = 85.3 bits (211), Expect = 7e-19
 Identities = 34/214 (15%), Positives = 64/214 (29%), Gaps = 31/214 (14%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNG--HIVYYKLQFVETGRSDSEASI 768
            +   P   P     EP  S++ ++ ++ P    + G   I+ YK ++   G     +  
Sbjct: 4   AQADTPS-SPSIDQVEP-YSSTAQVQFDEP---EATGGVPILKYKAEWRAVGEEVWHSKW 58

Query: 769 VTLK---NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQND 825
              K    +    +  LK  T Y + + A    G G  S     +T         P    
Sbjct: 59  YDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPS-APKLEG 117

Query: 826 FRKNKKT-----------NGSNFKGGYL-------NDPMRFDVSDGGALELNVTGLQPDT 867
                              GS  +  YL       ++         G+  + +  L  + 
Sbjct: 118 QMGEDGNSIKVNLIKQDDGGSPIR-HYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNA 176

Query: 868 IYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPH 901
            Y + V A  ++G    +     +T     +  H
Sbjct: 177 EYEVYVVAENQQGKSKAAHF-VFRTAAAHHHHHH 209

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score = 77.5 bits (191), Expect = 3e-16
 Identities = 19/119 (15%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE---TLLY 230
            A +  G+ E S   + +      +  P AP           S++++     +    + +
Sbjct: 86  AALNGKGLGEISAASEFKT---QPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRH 142

Query: 231 YVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           Y+++Y+  ++           + +  +++L    EYE Y++A N  G+   +     T 
Sbjct: 143 YLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 201

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score =  116 bits (292), Expect = 7e-31
 Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 6/118 (5%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++  +  + +  +PG P  N+     S TSI ++WE P     NG I  YKL ++E
Sbjct: 1   GSSGSSGRVETQPEVQLPG-PAPNLRAYAASPTSITVTWETP--VSGNGEIQNYKLYYME 57

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
            G +D E  +    +  S+ ++ LKK+TEY   V+A    G G S+  + +RT  D  
Sbjct: 58  KG-TDKEQDVDV--SSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSG 112

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score =  114 bits (288), Expect = 3e-30
 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++  +  + +   PG    +++    S +++ + W+ P + NG+I  YK+YY +  
Sbjct: 1   GSSGSSGRVETQPEVQLPG-PAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKG 59

Query: 524 SLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
           +      + Q VD +  + TI+ L  +T Y+ RV A+   GPG  +  V V+T     
Sbjct: 60  T-----DKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSG 112

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 85.5 bits (212), Expect = 5e-20
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 12/110 (10%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA--------- 327
           G    S           PG    +++    S +++ + W+ P + NG+I           
Sbjct: 1   GSSGSSGRVETQPEVQLPG-PAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKG 59

Query: 328 --KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
             K         +Y++ GL   T Y   + A +  G G +TP + VRT  
Sbjct: 60  TDKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLS 109

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 80.1 bits (198), Expect = 4e-18
 Identities = 31/158 (19%), Positives = 51/158 (32%), Gaps = 44/158 (27%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S  V  + +  +P    +LRA     T++T+ W  P      I +Y+LY+ +   
Sbjct: 1   GSSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGT 60

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
                + VD+                                           +Y++ GL
Sbjct: 61  DKE--QDVDVSSH----------------------------------------SYTINGL 78

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
              T Y   + A +  G G +TP + VRT       P 
Sbjct: 79  KKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSG--PS 114

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 75.1 bits (185), Expect = 2e-16
 Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 184 TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAA 240
           +S  V+ Q    P + LP    +++    + TS+ + W  P      +  Y + Y  K  
Sbjct: 5   SSGRVETQ----PEVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEK-- 58

Query: 241 NTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
            T   +   + +  YT+  L  YTEY F ++A N  G G  +    + T     
Sbjct: 59  GTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSG 112

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 48.5 bits (116), Expect = 4e-07
 Identities = 18/115 (15%), Positives = 30/115 (26%), Gaps = 19/115 (16%)

Query: 799 GDGPSSYPITIRTHEDDPSEVC-PTQNDFRKN---------KKTNGS------NFKGGYL 842
           G   SS  +  +     P                          NG        +     
Sbjct: 1   GSSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGT 60

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           +     DVS        + GL+  T Y+ +V A  + G G  +    ++T     
Sbjct: 61  DKEQDVDVSS---HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSG 112

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 6/31 (19%), Positives = 17/31 (54%)

Query: 36 APRDVQVRPLSSSTMVIQWDEPETPNGQITH 66
             +++    S +++ + W+ P + NG+I +
Sbjct: 20 PAPNLRAYAASPTSITVTWETPVSGNGEIQN 50

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score =  119 bits (300), Expect = 1e-30
 Identities = 33/211 (15%), Positives = 68/211 (32%), Gaps = 36/211 (17%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGII------ 251
              P    ++ ++  SV L W  P      ++ + +QY+       +   +  I      
Sbjct: 2   TYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPK 61

Query: 252 -------TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPA----VITTGETEPGTAPRD 300
                  +   +V +L P   Y F I+AV +      S+ +    +      +P   P  
Sbjct: 62  WNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPEL 121

Query: 301 VQVRPLSSSTMVIQWDEPETPNG-QIT---------------AKHHRRIGLVETYSLTGL 344
           +++   S + +V+ W      +   IT                K         ++ +  L
Sbjct: 122 LEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPL 181

Query: 345 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
              T+Y   L + S       +     RT++
Sbjct: 182 ETATMYEFKLQSFSAASASEFSALKQGRTQR 212

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score =  113 bits (284), Expect = 1e-28
 Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 20/207 (9%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELY---------W-----NDTYAKAKHHR 669
           P       + + +V L W  P + G  I+ +++          W     N  Y K K + 
Sbjct: 5   PTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNS 64

Query: 670 RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG----ATTPPIPVRTKQYVPGAPPQNVSC 725
            +G   T S+T L P   Y   + A     +      +            P   P+ +  
Sbjct: 65  ELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEI 124

Query: 726 EPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG-RSDSEASIVTLKNQTSFVLDELKK 784
           E  S T++ + W           I  Y   +  +    +   + +   +  SF +  L+ 
Sbjct: 125 EEYSETAVVLHWSLASDAD-EHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLET 183

Query: 785 WTEYRIWVLAGTSIGDGPSSYPITIRT 811
            T Y   + + ++      S     RT
Sbjct: 184 ATMYEFKLQSFSAASASEFSALKQGRT 210

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score =  104 bits (260), Expect = 2e-25
 Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 9/138 (6%)

Query: 447 LYPNTLYYIWLAAQSPRGEG----ATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQW 502
           L P   Y   + A     +      +           +P   P  +++   S + +V+ W
Sbjct: 77  LKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHW 136

Query: 503 DEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLT--TISDLTPHTIYTIRVQAF 559
                 +   ITGY  YY    S     +    ++        I+ L   T+Y  ++Q+F
Sbjct: 137 SLASDADEHLITGYYAYYRPSSS--AGEYFKATIEGAHARSFKIAPLETATMYEFKLQSF 194

Query: 560 TSVGPGPLSAPVLVKTQQ 577
           ++      SA    +TQ+
Sbjct: 195 SAASASEFSALKQGRTQR 212

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score = 89.1 bits (221), Expect = 4e-20
 Identities = 44/245 (17%), Positives = 76/245 (31%), Gaps = 53/245 (21%)

Query: 485 PRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYY----------TQDQSLPMSAWETQV 534
           P    V  LS  +++++W  P      I  +KV Y          T + ++P    +   
Sbjct: 5   PTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNS 64

Query: 535 VDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQGVPSQPRDLRAVDIQ 592
                 T +++DL P   Y  R+ A  S      S        Q G    P         
Sbjct: 65  ELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDP--------- 115

Query: 593 ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN-I 651
                                          P  L   +  ETAV L WS  + + E+ I
Sbjct: 116 ----------------------------MPVPELLEIEEYSETAVVLHWSLASDADEHLI 147

Query: 652 ISYELYWNDTYAKAKHHRRI---GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIP 708
             Y  Y+  + +  ++ +         ++ +  L   T+Y   L + S       +    
Sbjct: 148 TGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQ 207

Query: 709 VRTKQ 713
            RT++
Sbjct: 208 GRTQR 212

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score = 82.2 bits (203), Expect = 8e-18
 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 189 KVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPY 244
           K   +    L     P  ++I E + T+V L W+  S+     +  Y   Y+P ++   Y
Sbjct: 104 KFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEY 163

Query: 245 S--EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
               I G     + +  L   T YEF + + +       S+     T
Sbjct: 164 FKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRT 210

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score = 77.2 bits (190), Expect = 4e-16
 Identities = 32/210 (15%), Positives = 64/210 (30%), Gaps = 37/210 (17%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS------------E 765
            PP   +   LS  S+ + W  P        IV +K+Q+   G+  +             
Sbjct: 3   YPPTPPNVTRLSDESVMLRWMVP--RNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 60

Query: 766 ASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGP---SSYPITIRTHEDDPSEVCPT 822
                L    +  + +LK    YR  +LA  S  D     +S    ++          P 
Sbjct: 61  KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPE 120

Query: 823 QNDFRKNKKT-----------NGSNFKGGYL---------NDPMRFDVSDGGALELNVTG 862
             +  +  +T              +   GY           +  +  +    A    +  
Sbjct: 121 LLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAP 180

Query: 863 LQPDTIYTIQVAALTRKGDGDRSKPETIKT 892
           L+  T+Y  ++ + +     + S  +  +T
Sbjct: 181 LETATMYEFKLQSFSAASASEFSALKQGRT 210

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score =  114 bits (288), Expect = 2e-30
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 3/99 (3%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNN 538
           P T P       +S + ++++W        N  I G+ +YY    S   S ++  VV+ +
Sbjct: 4   PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGS 63

Query: 539 QLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           +    I  L P T Y I++Q F   G    S  ++ +T+
Sbjct: 64  KQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICETK 102

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score =  106 bits (267), Expect = 1e-27
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGR-SDSEASIVTLK- 772
            P   P     E +S T I + W   P   +N  I  + + +  T   +DS+     ++ 
Sbjct: 3   TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEG 62

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           ++   ++  L+  T Y I +      G+   S  +   T
Sbjct: 63  SKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score = 70.1 bits (172), Expect = 7e-15
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 8/95 (8%)

Query: 203 APLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGII---TTY 254
            P       V+ T + L WTY   +     +  + I Y+P  ++        ++     +
Sbjct: 7   GPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQW 66

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           + + +L P T Y+  +   N  G    S+  +  T
Sbjct: 67  HMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score = 68.6 bits (168), Expect = 3e-14
 Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 18/99 (18%)

Query: 294 PGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT----------------AKHHRRIGL 335
           P T P       +S + ++++W        N  I                  K     G 
Sbjct: 4   PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGS 63

Query: 336 VETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
            + + +  L P T Y I +   +  GE   +  +   TK
Sbjct: 64  KQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICETK 102

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score = 59.7 bits (145), Expect = 4e-11
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 6/97 (6%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGEN--IISYELYW----NDTYAKAKHHRRIGLVE 675
             P       + +T + L W+    S  N  I  + +Y+    +D  +  K     G  +
Sbjct: 6   TGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQ 65

Query: 676 TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
            + +  L P T Y I +   +  GE   +  +   TK
Sbjct: 66  WHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICETK 102

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 849 DVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKT 892
           DV +G      +  LQP+T Y I++      G+ + S     +T
Sbjct: 58  DVVEGSKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 7/36 (19%), Positives = 13/36 (36%), Gaps = 2/36 (5%)

Query: 33 PGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITH 66
          P T P       +S + ++++W        N  I  
Sbjct: 4  PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQG 39

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score =  115 bits (289), Expect = 2e-30
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 2/120 (1%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++    + +    P  APRDV    +SS  + + W  P    G I  + V+++++ 
Sbjct: 1   GSSGSSGKPAIPSSSVLPS-APRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREG 59

Query: 524 SLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
                A  T    + QL T+ +L P  +YT RV A+   GPG  S P+ V TQ       
Sbjct: 60  DNRERALNTTQPGSLQL-TVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPESGPSS 118

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 99.4 bits (248), Expect = 6e-25
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 3/118 (2%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++    + +   +P   P++V    +SS  +R+SW PP    + G+I  + + F  
Sbjct: 1   GSSGSSGKPAIPSSSVLPS-APRDVVPVLVSSRFVRLSWRPP--AEAKGNIQTFTVFFSR 57

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
            G +   A   T        +  LK    Y   V+A    G G SS PI + T  +  
Sbjct: 58  EGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPESG 115

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 82.1 bits (203), Expect = 9e-19
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 4/103 (3%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANT-PYSEISGIITTY 254
            LP AP DV    V++  VRL W  P+E    +  + + +  +  N       +   +  
Sbjct: 16  VLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALNTTQPGSLQ 75

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
            TV NL P   Y F ++A N  G G  S P  + T      ++
Sbjct: 76  LTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPESGPSS 118

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 76.7 bits (189), Expect = 6e-17
 Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 15/112 (13%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA--------- 327
           G    S    I +    P  APRDV    +SS  + + W  P    G I           
Sbjct: 1   GSSGSSGKPAIPSSSVLPS-APRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREG 59

Query: 328 -----KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
                  +         ++  L P  +Y   + A +  G G ++ PI V T+
Sbjct: 60  DNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQ 111

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 73.2 bits (180), Expect = 1e-15
 Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 42/160 (26%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S    + +   +PS PRD+  V +    V L+W  P  +  NI ++ +++  +  
Sbjct: 1   GSSGSSGKPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFF--SRE 58

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
                RA++  +                                           ++  L
Sbjct: 59  GDNRERALNTTQPGSL-------------------------------------QLTVGNL 81

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
            P  +Y   + A +  G G ++ PI V T+   P + P +
Sbjct: 82  KPEAMYTFRVVAYNEWGPGESSQPIKVATQ---PESGPSS 118

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 16/115 (13%)

Query: 799 GDGPSSYPITIRTHEDDPS-----EVCPTQNDF-----RKNKKTNGS------NFKGGYL 842
           G   SS    I +    PS           + F     R   +  G+       F     
Sbjct: 1   GSSGSSGKPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGD 60

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           N     + +  G+L+L V  L+P+ +YT +V A    G G+ S+P  + T     
Sbjct: 61  NRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPESG 115

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 30 VTEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT 65
           +   +APRDV    +SS  + + W  P    G I 
Sbjct: 14 SSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQ 49

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score =  113 bits (284), Expect = 6e-30
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV 769
            +    P   PQN+    L++++  ++W+PP +   NG I+ Y + F +    +S+  + 
Sbjct: 2   SSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDI---NSQQELQ 58

Query: 770 TLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
            +   T F L  LK  T Y I V A TS G GP S  I  RT
Sbjct: 59  NITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRT 100

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score =  110 bits (277), Expect = 5e-29
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 475 RTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWET 532
            +    P   P+++ V  L++ST  + WD P     NG+I  Y V +    S      E 
Sbjct: 2   SSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINS----QQEL 57

Query: 533 QVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
           Q +  +   T++ L P T Y I+V+A+TS G GPLS  +  +T
Sbjct: 58  QNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRT 100

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 77.3 bits (191), Expect = 2e-17
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 13/99 (13%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT-----------AKHHRRIG 334
           ++G + P   P+++ V  L++ST  + WD P     NG+I             +  + I 
Sbjct: 2   SSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT 61

Query: 335 LVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
               ++LTGL P+T Y I + A + +G G  +P I  RT
Sbjct: 62  TDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRT 100

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 66.6 bits (163), Expect = 1e-13
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 7/94 (7%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGIITTYY 255
              P ++ ++ +T ++  L W  P        ++ Y + ++   +      I+    T +
Sbjct: 9   SGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNITT--DTRF 66

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           T+  L P T Y+  + A  + G GP S      T
Sbjct: 67  TLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRT 100

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 60.4 bits (147), Expect = 2e-11
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGEN--IISYELYWNDTYAKAKHHRRIGLVETYSL 679
             P++L    +  +   LAW  P  +  N  IISY + + D     +  + I     ++L
Sbjct: 10  GFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDI-NSQQELQNITTDTRFTL 68

Query: 680 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
           TGL P+T Y I + A + +G G  +P I  RT
Sbjct: 69  TGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRT 100

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 45.0 bits (107), Expect = 6e-06
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 14/106 (13%)

Query: 795 GTSIGDGPSSYPITIRTHEDDPSEVC-----PTQNDFRKNKKTNG--SNFKGGYLNDPMR 847
           G+S   GPS +P  +       S        P   +       NG   ++   + +   +
Sbjct: 1   GSSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAE------RNGRIISYTVVFRDINSQ 54

Query: 848 FDVS-DGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKT 892
            ++          +TGL+PDT Y I+V A T KG G  S     +T
Sbjct: 55  QELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRT 100

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 32 EPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITH 66
           P   P+++ V  L++ST  + WD P     NG+I  
Sbjct: 7  GPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIIS 43

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score =  115 bits (290), Expect = 1e-29
 Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 14/190 (7%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
           P DL  VDI ++++ L W+        II Y +                   V  Y++TG
Sbjct: 26  PTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTG 83

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPP 741
           L P   Y I +      GE       P    Q     PP ++    +   ++R++W PPP
Sbjct: 84  LEPGIDYDISVYTVKNGGEST-----PTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPPP 138

Query: 742 VERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG 801
               +  +  + +++      +  A +    +  + VL  L   TEY + V +     + 
Sbjct: 139 ----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHES 194

Query: 802 PSSYPITIRT 811
                   +T
Sbjct: 195 TPLR-GRQKT 203

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score =  114 bits (287), Expect = 4e-29
 Identities = 45/206 (21%), Positives = 75/206 (36%), Gaps = 28/206 (13%)

Query: 174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYV 232
           + +S      +S +V         + +P  P D+   ++T +S+ L WT   S T++ Y 
Sbjct: 1   MGSSHHHHHHSSGLVPRGSH----MEVP-QPTDLSFVDITDSSIGLRWTPLNSSTIIGYR 55

Query: 233 IQYKPKAANTPYSEIS-GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
           I         P  E        YYTV  L P  +Y+  +  V N G   P++     T +
Sbjct: 56  ITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTT----LTQQ 111

Query: 292 TEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT--------------AKHHRRIGLVE 337
           T     P D++   +   TM + W  P  P+  +T                         
Sbjct: 112 TAVP-PPTDLRFTNIGPDTMRVTWAPP--PSIDLTNFLVRYSPVKNEEDVAELSISPSDN 168

Query: 338 TYSLTGLYPNTLYYIWLAAQSPRGEG 363
              LT L P T Y + +++   + E 
Sbjct: 169 AVVLTNLLPGTEYVVSVSSVYEQHES 194

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score =  101 bits (253), Expect = 1e-24
 Identities = 39/244 (15%), Positives = 79/244 (32%), Gaps = 52/244 (21%)

Query: 459 AQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVY 518
             S      ++  +P  +    P   P D+    ++ S++ ++W      +  I GY++ 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMEVP--QPTDLSFVDITDSSIGLRWTPL--NSSTIIGYRIT 57

Query: 519 YTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
                           VD++    T++ L P   Y I V    + G    +      TQQ
Sbjct: 58  VVAAGE--GIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTTL----TQQ 111

Query: 578 GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAV 637
                P DLR  +I    + + W+ P     ++ ++ + +                    
Sbjct: 112 TAVPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRY-------------------- 149

Query: 638 TLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 697
                 P  + E++    +  +D                  LT L P T Y + +++   
Sbjct: 150 -----SPVKNEEDVAELSISPSDN--------------AVVLTNLLPGTEYVVSVSSVYE 190

Query: 698 RGEG 701
           + E 
Sbjct: 191 QHES 194

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 95.7 bits (238), Expect = 1e-22
 Identities = 29/201 (14%), Positives = 69/201 (34%), Gaps = 18/201 (8%)

Query: 694 AQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYK 753
             S      ++  +P  +   VP   P ++S   ++ +SI + W P      +  I+ Y+
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMEVP--QPTDLSFVDITDSSIGLRWTPLN----SSTIIGYR 55

Query: 754 LQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
           +  V  G            +   + +  L+   +Y I V    + G+   +  +T +T  
Sbjct: 56  ITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPT-TLTQQTAV 114

Query: 814 DDPSEV---CPTQNDFR------KNKKTNGS--NFKGGYLNDPMRFDVSDGGALELNVTG 862
             P+++       +  R       +         +      + +           + +T 
Sbjct: 115 PPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTN 174

Query: 863 LQPDTIYTIQVAALTRKGDGD 883
           L P T Y + V+++  + +  
Sbjct: 175 LLPGTEYVVSVSSVYEQHEST 195

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 88.7 bits (220), Expect = 3e-20
 Identities = 43/286 (15%), Positives = 73/286 (25%), Gaps = 100/286 (34%)

Query: 281 PSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYS 340
            SS  V      E    P D+    ++ S++ ++W      +  I               
Sbjct: 10  HSSGLVPRGSHMEVP-QPTDLSFVDITDSSIGLRWTPL--NSSTIIG------------- 53

Query: 341 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYS 400
                    Y I +      GEG       V +                         Y+
Sbjct: 54  ---------YRITV---VAAGEGIPIFEDFVDSSVG---------------------YYT 80

Query: 401 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQ 460
           +TGL P   Y I +      GE                                      
Sbjct: 81  VTGLEPGIDYDISVYTVKNGGEST------------------------------------ 104

Query: 461 SPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYT 520
                       P    Q      P D++   +   TM + W  P  P+  +T + V Y+
Sbjct: 105 ------------PTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAPP--PSIDLTNFLVRYS 150

Query: 521 QDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGP 566
             ++    A  +    +N    +++L P T Y + V +        
Sbjct: 151 PVKNEEDVAELSISPSDNA-VVLTNLLPGTEYVVSVSSVYEQHEST 195

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 68.7 bits (168), Expect = 3e-13
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 2/92 (2%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEIS-GIITTYYT 256
           T    P D++ + +   ++R+ W  P S  L  ++++Y P       +E+S         
Sbjct: 112 TAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVV 171

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288
           + NL P TEY   + +V       P      T
Sbjct: 172 LTNLLPGTEYVVSVSSVYEQHESTPLRGRQKT 203

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score =  112 bits (281), Expect = 2e-29
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 7/118 (5%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++  I V T+  VPG  P N   EP S TSI +SW PP     +  I  Y+L + +
Sbjct: 1   GSSGSSGDIQVITQTGVPG-QPLNFKAEPESETSILLSWTPPR----SDTIANYELVYKD 55

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
                 E   +T++  TS+ L  LK  + Y   + A +  G G S+  I+ RT +   
Sbjct: 56  GE--HGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSSG 111

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score =  104 bits (262), Expect = 9e-27
 Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 6/117 (5%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++  I V T+   PG  P + +  P S +++++ W  P   +  I  Y++ Y   +
Sbjct: 1   GSSGSSGDIQVITQTGVPG-QPLNFKAEPESETSILLSWTPP--RSDTIANYELVYKDGE 57

Query: 524 SLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
                  +   ++      +  L P+++Y  R+ A +  G G  +A +  +T Q   
Sbjct: 58  H---GEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSSG 111

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 96.3 bits (240), Expect = 8e-24
 Identities = 44/154 (28%), Positives = 60/154 (38%), Gaps = 43/154 (27%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S  + V TQ GVP QP + +A    ET++ L+W+ P                   
Sbjct: 1   GSSGSSGDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRS----------------- 43

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
                                     + I +YEL + D     +    I    +Y L GL
Sbjct: 44  --------------------------DTIANYELVYKDGEHGEEQRITIEPGTSYRLQGL 77

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVP 716
            PN+LYY  LAA+SP+G GA+T  I  RT Q   
Sbjct: 78  KPNSLYYFRLAARSPQGLGASTAEISARTMQSSG 111

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 86.2 bits (214), Expect = 3e-20
 Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 15/111 (13%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT---------- 326
           G    S    + T    PG  P + +  P S +++++ W  P   +  I           
Sbjct: 1   GSSGSSGDIQVITQTGVPG-QPLNFKAEPESETSILLSWTPP--RSDTIANYELVYKDGE 57

Query: 327 --AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
              +    I    +Y L GL PN+LYY  LAA+SP+G GA+T  I  RT Q
Sbjct: 58  HGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 108

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 80.5 bits (199), Expect = 2e-18
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRN 259
           P  PL+ K    + TS+ L WT P S+T+  Y + YK    +     I+    T Y ++ 
Sbjct: 18  PGQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGE-HGEEQRITIEPGTSYRLQG 76

Query: 260 LSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
           L P + Y F + A +  G G  ++     T ++   ++
Sbjct: 77  LKPNSLYYFRLAARSPQGLGASTAEISARTMQSSGPSS 114

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 53.1 bits (128), Expect = 9e-09
 Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 20/115 (17%)

Query: 799 GDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKT------------NG--SNFKGGY--L 842
           G   SS  I + T    P +      +F+   ++            +   +N++  Y   
Sbjct: 1   GSSGSSGDIQVITQTGVPGQP----LNFKAEPESETSILLSWTPPRSDTIANYELVYKDG 56

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
                  ++        + GL+P+++Y  ++AA + +G G  +   + +T     
Sbjct: 57  EHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSSG 111

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTA 484
           L PN+LYY  LAA+SP+G GA+T  I  RT Q    ++
Sbjct: 77  LKPNSLYYFRLAARSPQGLGASTAEISARTMQSSGPSS 114

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score =  110 bits (277), Expect = 6e-29
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 475 RTKQYEPGTAPRDVQVRPLSSSTMVI--QWDEPETPNGQITGYKVYYTQDQSLPMSAWET 532
            +    P  APR++Q+     +  VI   W  P   +G I  Y V Y++  S     W +
Sbjct: 2   SSGSSGPD-APRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGS---KMWAS 57

Query: 533 QVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
           Q   +N  T I +L  +T+YT+RV A TS G G  S    + T +G  
Sbjct: 58  QRAASNF-TEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKGSG 104

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score = 79.8 bits (197), Expect = 4e-18
 Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 6/108 (5%)

Query: 710 RTKQYVPGAPPQ-NVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASI 768
            +    P AP    +S    +   I   W PP    ++G I  Y +++  +G     +  
Sbjct: 2   SSGSSGPDAPRNLQLSLPREAEGVIVGHWAPP--IHTHGLIREYIVEYSRSGSKMWASQR 59

Query: 769 VTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
                     +  L   T Y + V A TS G G  S   +I T +   
Sbjct: 60  AA---SNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKGSG 104

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score = 67.9 bits (166), Expect = 5e-14
 Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 14/101 (13%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVI--QWDEPETPNGQIT-----------AKHHRRIG 334
           ++G + P  APR++Q+     +  VI   W  P   +G I                 +  
Sbjct: 2   SSGSSGPD-APRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRA 60

Query: 335 LVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                 +  L  NTLY + +AA + RG G  +    + T +
Sbjct: 61  ASNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score = 65.9 bits (161), Expect = 3e-13
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 201 PVAPLDVKIS--EVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYY 255
           P AP ++++S        +   W  P  T   +  Y+++Y      +         + + 
Sbjct: 8   PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRS--GSKMWASQRAASNFT 65

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
            ++NL   T Y   + AV + G G  S    ITT +   
Sbjct: 66  EIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKGSG 104

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score = 58.2 bits (141), Expect = 2e-10
 Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 6/101 (5%)

Query: 624 PRDLRAVDIQ--ETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTG 681
           PR+L+    +  E  +   W+ P H+   I  Y + ++ + +K    +R        +  
Sbjct: 11  PRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRAA-SNFTEIKN 69

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
           L  NTLY + +AA + RG G  +    + T +   G+ P +
Sbjct: 70  LLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK---GSGPSS 107

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 14/38 (36%), Positives = 24/38 (63%)

Query: 860 VTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           +  L  +T+YT++VAA+T +G G+ S  ++I T  G  
Sbjct: 67  IKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKGSG 104

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score = 39.0 bits (91), Expect = 7e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 35 TAPRDVQVRPLSSSTMVI--QWDEPETPNGQIT 65
           APR++Q+     +  VI   W  P   +G I 
Sbjct: 9  DAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIR 41

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score =  110 bits (277), Expect = 1e-28
 Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 10/125 (8%)

Query: 463 RGEGATTPPIPVRT-----KQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKV 517
              G  T  +   T      +      P  + VRPL +S +V+ W  PE  N  + GY +
Sbjct: 4   GSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTS-IVVSWTPPENQNIVVRGYAI 62

Query: 518 YYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPG-PLSAPVLVKTQ 576
            Y         A   +V    +  TI +L P + Y I ++AF +VG G PL    + +  
Sbjct: 63  GYGIGSP---HAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 119

Query: 577 QGVPS 581
              PS
Sbjct: 120 TSGPS 124

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 91.4 bits (227), Expect = 5e-22
 Identities = 29/126 (23%), Positives = 46/126 (36%), Gaps = 11/126 (8%)

Query: 698 RGEGATTPPIPVRT-----KQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYY 752
              G  T  +   T      +      P ++   P   TSI +SW PP  E  N  +  Y
Sbjct: 4   GSSGPATDWLSAETFESDLDETRVPEVPSSLHVRP-LVTSIVVSWTPP--ENQNIVVRGY 60

Query: 753 KLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG-PSSYPITIRT 811
            + +     S    +I     Q  + ++ L   + Y I + A  ++G+G P       R 
Sbjct: 61  AIGYGIG--SPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRP 118

Query: 812 HEDDPS 817
           H   PS
Sbjct: 119 HTSGPS 124

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 73.6 bits (181), Expect = 8e-16
 Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 19/120 (15%)

Query: 274 NNLGRGPPSSPAVITT-----GETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA- 327
           ++   GP +      T      ET     P  + VRPL +S +V+ W  PE  N  +   
Sbjct: 2   SSGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTS-IVVSWTPPENQNIVVRGY 60

Query: 328 --KHHRRIGLVET---------YSLTGLYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTKQ 375
              +       +T         Y++  L P++ Y I L A +  GEG         R   
Sbjct: 61  AIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHT 120

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 69.4 bits (170), Expect = 3e-14
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 6/101 (5%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P  P  + +     TS+ + WT P      +  Y I Y   + +    ++      YYT+
Sbjct: 28  PEVPSSLHV-RPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYK-QRYYTI 85

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT-TGETEPGTA 297
            NL P + Y   + A NN+G G P   + +T    + P + 
Sbjct: 86  ENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTSGPSSG 126

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 61.7 bits (150), Expect = 1e-11
 Identities = 26/166 (15%), Positives = 48/166 (28%), Gaps = 49/166 (29%)

Query: 560 TSVGPGPLSAPVLVKTQQG------VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISY 613
           +S   GP +  +  +T +       VP  P  L                           
Sbjct: 2   SSGSSGPATDWLSAETFESDLDETRVPEVPSSLH-------------------------- 35

Query: 614 ELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGL 673
                           V    T++ ++W+ P +    +  Y + +      A+  +    
Sbjct: 36  ----------------VRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYK 79

Query: 674 VETYSLTGLYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTKQYVPGA 718
              Y++  L P++ Y I L A +  GEG         R     P +
Sbjct: 80  QRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTSGPSS 125

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 20/123 (16%)

Query: 795 GTSIGDGPSSYPITIRTHEDDPSEVCPTQ--NDFRKN-------------KKTNG--SNF 837
           G+S   GP++  ++  T E D  E    +  +                  +  N     +
Sbjct: 1   GSSGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGY 60

Query: 838 KGGYLND--PMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGD-RSKPETIKTPG 894
             GY       +    D       +  L P + Y I + A    G+G    +    +   
Sbjct: 61  AIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHT 120

Query: 895 GVP 897
             P
Sbjct: 121 SGP 123

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 31 TEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT 65
          T     P  + VRPL +S +V+ W  PE  N  + 
Sbjct: 25 TRVPEVPSSLHVRPLVTS-IVVSWTPPENQNIVVR 58

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score =  109 bits (275), Expect = 1e-28
 Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 476 TKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV 535
           +          ++Q    S ++++I W+ P   NG + GY+++ T      +S  + Q +
Sbjct: 2   SSGSSGPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCT-----EVSTGKEQNI 56

Query: 536 DNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
           + + L+  +  L   T Y++R  A+   GPG  +  + V T     
Sbjct: 57  EVDGLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDSG 102

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score =  107 bits (270), Expect = 6e-28
 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT 770
           +    PG P +N+     S TSI I+WEPP    +NG +  Y+L   E      +   V 
Sbjct: 3   SGSSGPG-PVENLQAVSTSPTSILITWEPP--AYANGPVQGYRLFCTEVSTGKEQNIEV- 58

Query: 771 LKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
             +  S+ L+ LKK+TEY +  LA    G G S+  IT+ T  D  
Sbjct: 59  --DGLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDSG 102

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 76.9 bits (190), Expect = 4e-17
 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 12/99 (12%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA-----------KHHRRIGLV 336
           ++G + PG    ++Q    S ++++I W+ P   NG +             K        
Sbjct: 2   SSGSSGPG-PVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDG 60

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
            +Y L GL   T Y +   A +  G G +T  I V T  
Sbjct: 61  LSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLS 99

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 74.2 bits (183), Expect = 3e-16
 Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 5/102 (4%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYY 255
           + P    +++    + TS+ + W  P+     +  Y +       +T   +   +    Y
Sbjct: 6   SGPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEV--STGKEQNIEVDGLSY 63

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
            +  L  +TEY    +A N  G G  +    + T      ++
Sbjct: 64  KLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDSGPSS 105

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 68.4 bits (168), Expect = 3e-14
 Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTG 681
               +L+AV    T++ + W  P ++   +  Y L+  +     + +  +    +Y L G
Sbjct: 9   GPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVD-GLSYKLEG 67

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
           L   T Y +   A +  G G +T  I V T       P 
Sbjct: 68  LKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDSG--PS 104

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 852 DGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           +   L   + GL+  T Y+++  A  R G G  +   T+ T     
Sbjct: 57  EVDGLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDSG 102

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 33 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITH 66
                ++Q    S ++++I W+ P   NG +  
Sbjct: 7  GPGPVENLQAVSTSPTSILITWEPPAYANGPVQG 40

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score =  109 bits (273), Expect = 3e-28
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++ P  VRT +  PG     +    +  +++ + W EP   NG +TGY++ + ++ 
Sbjct: 1   GSSGSSGPQLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISW-EEY 58

Query: 524 SLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
           +   +     + +      ++ LT  T YTI V A TS G G +SA  +  +    PS P
Sbjct: 59  NRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI--SSGVPPSGP 116

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score =  106 bits (266), Expect = 3e-27
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 3/110 (2%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++ P  VRT + VPG P  ++S   +  TS+++SW+ P     NG +  Y++ + E
Sbjct: 1   GSSGSSGPQLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQEP--GEKNGILTGYRISWEE 57

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPIT 808
             R+++  +         + +  L   T Y I V A TS G G  S    
Sbjct: 58  YNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI 107

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 78.2 bits (193), Expect = 2e-17
 Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 15/107 (14%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT---------- 326
           G    S P ++ T E  PG     +    +  +++ + W EP   NG +T          
Sbjct: 1   GSSGSSGPQLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYN 59

Query: 327 ----AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI 369
                  H    +   Y +TGL   T Y I +AA + +G+G  +   
Sbjct: 60  RTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 75.6 bits (186), Expect = 2e-16
 Identities = 33/160 (20%), Positives = 53/160 (33%), Gaps = 42/160 (26%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S P LV+T + VP     L   +I +T++ ++W +P      +  Y + W     
Sbjct: 1   GSSGSSGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISW----- 55

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
                   +   T VT      T                               Y +TGL
Sbjct: 56  -----EEYNRTNTRVTHYLPNVTLE-----------------------------YRVTGL 81

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
              T Y I +AA + +G+G  +          VP + P +
Sbjct: 82  TALTTYTIEVAAMTSKGQGQVSAST---ISSGVPPSGPSS 118

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 70.5 bits (173), Expect = 1e-14
 Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 7/102 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPK-AANTPYSEISGIITTYYT 256
           P     +  SE+  TS+++ W  P E    L  Y I ++     NT  +     +T  Y 
Sbjct: 18  PGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYR 77

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAP 298
           V  L+  T Y   + A+ + G+G  S+    T     P + P
Sbjct: 78  VTGLTALTTYTIEVAAMTSKGQGQVSAS---TISSGVPPSGP 116

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 60.9 bits (148), Expect = 2e-11
 Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 18/119 (15%)

Query: 799 GDGPSSYPITIRTHEDDPSEVC-PTQNDFRKN---------KKTNGS------NFKGGYL 842
           G   SS P  +RTHED P  V   + ++              + NG       +++    
Sbjct: 1   GSSGSSGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNR 60

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPH 901
            +           LE  VTGL   T YTI+VAA+T KG G  S      + G  P+ P 
Sbjct: 61  TNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI--SSGVPPSGPS 117

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 42.0 bits (99), Expect = 9e-05
 Identities = 6/31 (19%), Positives = 13/31 (41%)

Query: 36 APRDVQVRPLSSSTMVIQWDEPETPNGQITH 66
              +    +  +++ + W EP   NG +T 
Sbjct: 20 PVGHLSFSEILDTSLKVSWQEPGEKNGILTG 50

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score =  108 bits (272), Expect = 4e-28
 Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 3/121 (2%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP-ETPNGQITGYKVYYTQD 522
           G   ++      T    P  APRDV    +S+  + + W  P   P+G    Y V+YT++
Sbjct: 1   GSSGSSGEHAPATTGPLPS-APRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKE 59

Query: 523 QSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ 582
                    T      Q  TI +L P T+Y  RV A    G G  SAP+ V+TQ      
Sbjct: 60  GIARERVENTSHPGEMQ-VTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESGPS 118

Query: 583 P 583
            
Sbjct: 119 S 119

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 99.4 bits (248), Expect = 7e-25
 Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 2/119 (1%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++      T   +P   P++V    +S+  I+++W  P     +G  + Y + + +
Sbjct: 1   GSSGSSGEHAPATTGPLPS-APRDVVASLVSTRFIKLTWRTPA-SDPHGDNLTYSVFYTK 58

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
            G +       +   +    +  L   T Y   V+A    G G SS P+ + T  +   
Sbjct: 59  EGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESGP 117

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 82.8 bits (205), Expect = 5e-19
 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 5/104 (4%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYS-EISGIITT 253
            LP AP DV  S V+   ++L W  P+       L Y + Y  +          S     
Sbjct: 16  PLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEM 75

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
             T++NL P T Y F ++A N  G G  S+P  + T      ++
Sbjct: 76  QVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESGPSS 119

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 68.2 bits (167), Expect = 5e-14
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 16/113 (14%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP-ETPNGQITA-------- 327
           G    S      T    P  APRDV    +S+  + + W  P   P+G            
Sbjct: 1   GSSGSSGEHAPATTGPLPS-APRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKE 59

Query: 328 ------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
                   +         ++  L P T+Y   + AQ+  G G ++ P+ V T+
Sbjct: 60  GIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQ 112

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 64.7 bits (158), Expect = 9e-13
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 42/159 (26%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKP-THSGENIISYEL-YWNDT 620
           G    S      T   +PS PRD+ A  +    + L W  P +    + ++Y + Y  + 
Sbjct: 1   GSSGSSGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEG 60

Query: 621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLT 680
            A+ R        E                                           ++ 
Sbjct: 61  IARERVENTSHPGEM----------------------------------------QVTIQ 80

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
            L P T+Y   + AQ+  G G ++ P+ V T+     + 
Sbjct: 81  NLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESGPSS 119

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
            S  G +++ +  L P T+Y  +V A  + G G+ S P  ++T     
Sbjct: 69  TSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG 116

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score =  110 bits (277), Expect = 6e-28
 Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 15/191 (7%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P+DL   D  ET ++L W +P         Y L +     K           ++ L GL 
Sbjct: 10  PKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLD 66

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVE 743
             T Y I L A+  R +       P   K       P+ +S   ++  S  +SW PP   
Sbjct: 67  AGTEYTISLVAEKGRHKSK-----PTTIKGSTVVGSPKGISFSDITENSATVSWTPPR-- 119

Query: 744 RSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPS 803
                +  Y++ +V           V   ++T   L +L    +Y + +++     +   
Sbjct: 120 ---SRVDSYRVSYVPITGGTPNVVTVD-GSKTRTKLVKLVPGVDYNVNIISVKGFEESEP 175

Query: 804 SYPITIRTHED 814
                ++T  D
Sbjct: 176 IS-GILKTALD 185

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score =  108 bits (272), Expect = 3e-27
 Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 22/186 (11%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR 258
           T    P D+++S+ T T++ L W  P      Y + Y   +      EI    T+ + +R
Sbjct: 5   TDLDNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKNEMEIPVDSTS-FILR 63

Query: 259 NLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP 318
            L   TEY   ++A     +  P++      G T  G +P+ +    ++ ++  + W  P
Sbjct: 64  GLDAGTEYTISLVAEKGRHKSKPTT----IKGSTVVG-SPKGISFSDITENSATVSWTPP 118

Query: 319 E----------TPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG----- 363
                       P    T       G      L  L P   Y + + +     E      
Sbjct: 119 RSRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPISG 178

Query: 364 -ATTPP 368
              T  
Sbjct: 179 ILKTAL 184

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 97.1 bits (242), Expect = 3e-23
 Identities = 34/231 (14%), Positives = 65/231 (28%), Gaps = 61/231 (26%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT- 541
             P+D++V   + +T+ ++W  P     +   Y++ Y      P        +  +  + 
Sbjct: 8   DNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVS----PSGKKNEMEIPVDSTSF 60

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWS 601
            +  L   T YTI + A                    V   P+ +   DI E + T++W+
Sbjct: 61  ILRGLDAGTEYTISLVAEKGRHKS----KPTTIKGSTVVGSPKGISFSDITENSATVSWT 116

Query: 602 KPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT 661
            P      + SY + +        ++  VD  +T                          
Sbjct: 117 PPRS---RVDSYRVSYVPITGGTPNVVTVDGSKT-------------------------- 147

Query: 662 YAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG------ATTPP 706
                            L  L P   Y + + +     E         T  
Sbjct: 148 --------------RTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTAL 184

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 82.1 bits (203), Expect = 4e-18
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 12/121 (9%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           L   T Y I L A+  R +       P   K      +P+ +    ++ ++  + W  P 
Sbjct: 65  LDAGTEYTISLVAEKGRHKSK-----PTTIKGSTVVGSPKGISFSDITENSATVSWTPP- 118

Query: 507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL-TTISDLTPHTIYTIRVQAFTSVGPG 565
               ++  Y+V Y               VD ++  T +  L P   Y + + +       
Sbjct: 119 --RSRVDSYRVSYVPITG---GTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEES 173

Query: 566 P 566
            
Sbjct: 174 E 174

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 81.3 bits (201), Expect = 7e-18
 Identities = 30/174 (17%), Positives = 60/174 (34%), Gaps = 17/174 (9%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P+++     + T++ + W  P           Y+L +V      +E  I    + TSF+
Sbjct: 9   NPKDLEVSDPTETTLSLRWRRPV-----AKFDRYRLTYVSPSGKKNEMEIPV--DSTSFI 61

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEV---CPTQNDFR---KNKKT 832
           L  L   TEY I ++A         +  I   T    P  +     T+N         ++
Sbjct: 62  LRGLDAGTEYTISLVAEKGRHKSKPT-TIKGSTVVGSPKGISFSDITENSATVSWTPPRS 120

Query: 833 NGSNFKGGYL---NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGD 883
              +++  Y+            DG      +  L P   Y + + ++    + +
Sbjct: 121 RVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESE 174

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score =  106 bits (266), Expect = 2e-27
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 5/110 (4%)

Query: 474 VRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ 533
             + Q  P      ++      +++ + W EPE PNG I  Y++ Y +      S     
Sbjct: 4   GSSGQAAPS-QVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYS--T 60

Query: 534 VVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
           +       T+S L P T Y  +V+A TS G G  S  + V+T  G PS P
Sbjct: 61  LKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVET--GKPSGP 108

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 94.7 bits (236), Expect = 2e-23
 Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 4/108 (3%)

Query: 709 VRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASI 768
             + Q  P      +  E    TS+ + W+ P  E+ NG I+ Y++++ E  +     S 
Sbjct: 4   GSSGQAAPSQVV-VIRQERAGQTSVSLLWQEP--EQPNGIILEYEIKYYEKDKEMQSYST 60

Query: 769 VTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
           +     T   +  LK  T Y   V A TS G G  S  + + T +   
Sbjct: 61  LKA-VTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSG 107

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 74.3 bits (183), Expect = 3e-16
 Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 14/102 (13%)

Query: 287 ITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT-------------AKHHRRI 333
            ++G+  P      ++      +++ + W EPE PNG I                +    
Sbjct: 4   GSSGQAAPS-QVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLK 62

Query: 334 GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
            +    +++GL P T Y   + A++  G G  +  + V T +
Sbjct: 63  AVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGK 104

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 72.4 bits (178), Expect = 2e-15
 Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P   + ++      TSV L W  P +    +L Y I+Y  K            +TT  TV
Sbjct: 11  PSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATV 70

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
             L P T Y F + A  + G G  S    + TG+
Sbjct: 71  SGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGK 104

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 68.5 bits (168), Expect = 3e-14
 Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 3/99 (3%)

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL-YWNDTYAKAKHHRRIGLVETYSLTG 681
           +   +R     +T+V+L W +P      I+ YE+ Y+        +     +    +++G
Sbjct: 13  QVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSG 72

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
           L P T Y   + A++  G G  +  + V T +  P  P 
Sbjct: 73  LKPGTRYVFQVRARTSAGCGRFSQAMEVETGK--PSGPS 109

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 48.1 bits (115), Expect = 4e-07
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 844 DPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
           +   +           V+GL+P T Y  QV A T  G G  S+   ++T  G P+ P
Sbjct: 54  EMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVET--GKPSGP 108

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query: 36 APRDVQVRPLSSSTMVIQWDEPETPNGQITH 66
              ++      +++ + W EPE PNG I  
Sbjct: 13 QVVVIRQERAGQTSVSLLWQEPEQPNGIILE 43

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score =  105 bits (263), Expect = 5e-27
 Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 6/120 (5%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++  + V TK+  P  PP NV     + T + ++WE      +   +  YK+ +  
Sbjct: 1   GSSGSSGTVNVTTKKTPPSQPPGNVVWN-ATDTKVLLNWEQVKAMENESEVTGYKVFY-- 57

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITI-RTHEDDPS 817
             R+ S+ ++  L    +     L    +Y I V A T  GDG SS  I I R     PS
Sbjct: 58  --RTSSQNNVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGPS 115

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 96.1 bits (239), Expect = 1e-23
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQ 521
           G   ++  + V TK+  P   P +V     + + +++ W++        ++TGYKV+Y  
Sbjct: 1   GSSGSSGTVNVTTKKTPPSQPPGNVVW-NATDTKVLLNWEQVKAMENESEVTGYKVFYRT 59

Query: 522 DQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLV-KTQQGVP 580
                 S    QV++ N+ +    L     Y I V+A T  G G  S  + + +     P
Sbjct: 60  S-----SQNNVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGP 114

Query: 581 S 581
           S
Sbjct: 115 S 115

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 63.3 bits (154), Expect = 3e-12
 Identities = 18/109 (16%), Positives = 40/109 (36%), Gaps = 13/109 (11%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQIT-------A 327
           G    S    +TT +T P   P +V     + + +++ W++        ++T        
Sbjct: 1   GSSGSSGTVNVTTKKTPPSQPPGNVVW-NATDTKVLLNWEQVKAMENESEVTGYKVFYRT 59

Query: 328 KHHRRIGLVET---YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
                + ++ T    +   L     Y I + A +  G+G ++  I +  
Sbjct: 60  SSQNNVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPR 108

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 54.1 bits (130), Expect = 4e-09
 Identities = 26/158 (16%), Positives = 45/158 (28%), Gaps = 44/158 (27%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S  V V T++  PSQP      +  +T V L W +                    
Sbjct: 1   GSSGSSGTVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQV------------------- 41

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL-YWNDTYAKAKHHRRIGLVETYSLTG 681
                               K   +   +  Y++ Y   +    +         T +   
Sbjct: 42  --------------------KAMENESEVTGYKVFYRTSSQNNVQVLNTNK---TSAELV 78

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPV-RTKQYVPGA 718
           L     Y I + A +  G+G ++  I + R     P +
Sbjct: 79  LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGPSS 116

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 51.0 bits (122), Expect = 6e-08
 Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 9/102 (8%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGIITTYY 255
           P  P    +   T T V L+W           +  Y + Y+  + N      +       
Sbjct: 18  PSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNT---NKTS 74

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVI-TTGETEPGT 296
               L    +Y   + A  + G G  S    I     + P +
Sbjct: 75  AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGPSS 116

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 48.3 bits (115), Expect = 5e-07
 Identities = 23/117 (19%), Positives = 35/117 (29%), Gaps = 19/117 (16%)

Query: 799 GDGPSSYPITIRTHEDDPSEVCPTQN--------------DFRKNKKTNG--SNFKGGYL 842
           G   SS  + + T +  PS+  P  N              +  K  +     + +K  Y 
Sbjct: 1   GSSGSSGTVNVTTKKTPPSQ--PPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYR 58

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETI-KTPGGVPN 898
                               L     Y I+V A T  GDG  S+   I +     P+
Sbjct: 59  TSSQNNVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGPS 115

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score =  104 bits (262), Expect = 6e-27
 Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 2/101 (1%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           + P  P+D+ ++E TATSV L W    SE + YY IQY+      P+ E+ G+ TT Y++
Sbjct: 6   SGPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSI 65

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGETEPGTA 297
             LSP++EY F ++AVN++GRGPPS      T  ++ P + 
Sbjct: 66  GGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQSGPSSG 106

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 63.1 bits (154), Expect = 3e-12
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
            P  PP ++     ++TS+ ++W+       +  + YY +Q+   G ++     V     
Sbjct: 7   GPK-PPIDLVVTETTATSVTLTWDSGN----SEPVTYYGIQYRAAG-TEGPFQEVDGVAT 60

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
           T + +  L  ++EY   VLA  SIG GP S  +  RT E   
Sbjct: 61  TRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQSG 102

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 62.7 bits (153), Expect = 3e-12
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 9/102 (8%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-- 541
            P D+ V   +++++ + WD     +  +T Y + Y        +    Q VD    T  
Sbjct: 10  PPIDLVVTETTATSVTLTWDSG--NSEPVTYYGIQYRA----AGTEGPFQEVDGVATTRY 63

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQGVPSQ 582
           +I  L+P + Y  RV A  S+G GP S  V     +Q  PS 
Sbjct: 64  SIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQSGPSS 105

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET-YSLTGL 682
           P DL   +   T+VTL W         +  Y + +     +       G+  T YS+ GL
Sbjct: 11  PIDLVVTETTATSVTLTWDSGNSEP--VTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGL 68

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721
            P + Y   + A +  G G  +  +  RT +     P  
Sbjct: 69  SPFSEYAFRVLAVNSIGRGPPSEAVRARTGE--QSGPSS 105

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score =  112 bits (280), Expect = 4e-26
 Identities = 40/303 (13%), Positives = 84/303 (27%), Gaps = 41/303 (13%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           +  +P   +   P    +++ S +   CV+    +  +           P   L      
Sbjct: 193 ISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHT-----NCPLIHLDGENVA 247

Query: 160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
           + +  ++ S +               T++            P  P  +         +  
Sbjct: 248 IKIRNISVSASSGTNVVFTTEDNIFGTVIFAG-------YPPDTPQQLNCETHDLKEIIC 300

Query: 220 DWTYPSETLLY------YVIQYKP--KAANTPYSEISGIITTYYTVRNLSPYTEYEFYII 271
            W     T L       Y +      K      +E     +     + L     Y F + 
Sbjct: 301 SWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLN 360

Query: 272 AVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI------ 325
           A N LGR    S  ++   E      P   +V+ ++S+ + + W  P             
Sbjct: 361 AHNPLGRS--QSTILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIE 418

Query: 326 ----TAKHHRRIGLVE-------TYSLTGLYPNTLYYIWL--AAQSPRGEGATTPPIPVR 372
                +   +R   ++         +L  L P TLY   +  + ++       +      
Sbjct: 419 IKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHL 478

Query: 373 TKQ 375
           T +
Sbjct: 479 TTE 481

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score =  111 bits (277), Expect = 9e-26
 Identities = 60/428 (14%), Positives = 124/428 (28%), Gaps = 70/428 (16%)

Query: 453 YYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRP-LSSSTMVIQWDEP--ETPN 509
           Y I + +    G   +   +  +     P T P  +Q+    S+ST+ ++W++     P+
Sbjct: 57  YEITINSLHDFGSSTSKFTLNEQNVSLIPDT-PEILQLSADFSTSTLYLKWNDRGSVFPH 115

Query: 510 GQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLT-------PHTIYTIRVQAFTSV 562
                +++   + +S+ +    T     N   T+   +          I+ + ++ +   
Sbjct: 116 RSNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDN 175

Query: 563 ----GPGPLSAPVLVKTQQGVPSQP---------------------------------RD 585
               G    S    VK    +P                                     +
Sbjct: 176 LHFSGLEEWSDWSPVKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTN 235

Query: 586 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-----------KPRDLRAVDIQE 634
              + +    V +     + S  +  +      D               P+ L       
Sbjct: 236 CPLIHLDGENVAIKIRNISVSASSGTNVVFTTEDNIFGTVIFAGYPPDTPQQLNCETHDL 295

Query: 635 TAVTLAWSKPTH---SGENIISYEL-YWNDTYAKAKHHRRIGLVETYS--LTGLYPNTLY 688
             +  +W+        G    SY L                   E+Y      L    +Y
Sbjct: 296 KEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIY 355

Query: 689 YIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH 748
              L A +P G       I V   + V    P +   + ++ST++++SW  P        
Sbjct: 356 NFTLNAHNPLGRS--QSTILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINF 413

Query: 749 IVYYKLQFVETGRSDSEASIVTLKN-QTSFVLDELKKWTEYRIWVLAGT--SIGDGPSSY 805
           +   +++   + +     +I  ++N      LD+L  +T Y   +   T         S 
Sbjct: 414 LCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSN 473

Query: 806 PITIRTHE 813
                T E
Sbjct: 474 KKQHLTTE 481

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score =  102 bits (256), Expect = 4e-23
 Identities = 70/534 (13%), Positives = 148/534 (27%), Gaps = 79/534 (14%)

Query: 206 DVKISEVTATSVRLDWTYPSET--LLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPY 263
           D+K         +  W  PS T     Y +  + ++ +    E      T   +  LS  
Sbjct: 1   DLKCVTNNLQVWQCSWKAPSGTGRGTDYEVCIEQRSRSCYQLE-----KTSIKIPALSH- 54

Query: 264 TEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRP-LSSSTMVIQWDEPETPN 322
            +YE  I ++++ G                P T P  +Q+    S+ST+ ++W++  +  
Sbjct: 55  GDYEITINSLHDFGSSTSKFTLNEQNVSLIPDT-PEILQLSADFSTSTLYLKWNDRGSVF 113

Query: 323 G---------QITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
                     ++  K    +  + T+  T    +TL++   A+  P         I    
Sbjct: 114 PHRSNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYI 173

Query: 374 KQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPN---------TLYYIWLAAQSPRGEGA 424
                +           ++I  +          +         T   +          G 
Sbjct: 174 DNLHFSGLEEWSDWSPVKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGH 233

Query: 425 TTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTA 484
           T  P+       G+      + +  +      +   +      T            P   
Sbjct: 234 TNCPLIHLD---GENVAIKIRNISVSASSGTNVVFTTEDNIFGT------VIFAGYPPDT 284

Query: 485 PRDVQVRPLSSSTMVIQWDEPE---TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT 541
           P+ +         ++  W+          + T Y +  +               + +   
Sbjct: 285 PQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQL 344

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWS 601
               L    IY   + A   +G    S  ++  T++  P  P   +  DI  TAV L+W 
Sbjct: 345 LFQMLPNQEIYNFTLNAHNPLGRSQ-STILVNITEKVYPHTPTSFKVKDINSTAVKLSWH 403

Query: 602 KPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT 661
            P +  +     E+                             +   +  ++ +   N +
Sbjct: 404 LPGNFAKINFLCEIEI-----------------------KKSNSVQEQRNVTIQGVENSS 440

Query: 662 YAKAKHHRRIGLVETYSLTGLYPNTLYYIWL--AAQSPRGEGATTPPIPVRTKQ 713
           Y               +L  L P TLY   +  + ++       +      T +
Sbjct: 441 Y-------------LVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTE 481

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score = 82.6 bits (203), Expect = 1e-16
 Identities = 54/452 (11%), Positives = 116/452 (25%), Gaps = 62/452 (13%)

Query: 166 TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKIS-EVTATSVRLDWT-- 222
                 T  +    G   +   +  Q     +  +P  P  +++S + + +++ L W   
Sbjct: 54  HGDYEITINSLHDFGSSTSKFTLNEQ----NVSLIPDTPEILQLSADFSTSTLYLKWNDR 109

Query: 223 ---YPSETLLYYVIQYKPK---------AANTPYSEISGIITTYYTVRNLSPYTEYEFYI 270
              +P  + + + I+   K            T  +    +    +          +   I
Sbjct: 110 GSVFPHRSNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEI 169

Query: 271 IAVNNLGRGPPSSP--------AVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETP- 321
               +                  +    +++    P+D  +   S  T      E     
Sbjct: 170 RCYIDNLHFSGLEEWSDWSPVKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSA 229

Query: 322 -NGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATT-----PP-----IP 370
             G          G      +  +  +      +   +      T      PP     + 
Sbjct: 230 LIGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTTEDNIFGTVIFAGYPPDTPQQLN 289

Query: 371 VRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIP 430
             T    +                   +Y        TL                     
Sbjct: 290 CETHDLKEIICSWNPGRVTALVGPRATSY--------TLVE-----SFSGKYVRLKRAEA 336

Query: 431 VRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQV 490
              + Y        Q L    +Y   L A +P G       I V   +      P   +V
Sbjct: 337 PTNESYQLLF----QMLPNQEIYNFTLNAHNPLGRS--QSTILVNITEKVYPHTPTSFKV 390

Query: 491 RPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLP--MSAWETQVVDNNQLTTISDLTP 548
           + ++S+ + + W  P          ++   +  S+    +     V +++ L  +  L P
Sbjct: 391 KDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNP 450

Query: 549 HTIYTIRVQAFT--SVGPGPLSAPVLVKTQQG 578
           +T+YT R++  T         S      T + 
Sbjct: 451 YTLYTFRIRCSTETFWKWSKWSNKKQHLTTEA 482

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score = 42.1 bits (98), Expect = 8e-04
 Identities = 51/424 (12%), Positives = 103/424 (24%), Gaps = 47/424 (11%)

Query: 487 DVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDL 546
           D++    +       W  P    G+ T Y+V              +          I  L
Sbjct: 1   DLKCVTNNLQVWQCSWKAPSG-TGRGTDYEVCI-------EQRSRSCYQLEKTSIKIPAL 52

Query: 547 TPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLR-AVDIQETAVTLAWSKPTH 605
           +    Y I + +    G       +  +    +P  P  L+ + D   + + L W+    
Sbjct: 53  SHGD-YEITINSLHDFGSSTSKFTLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGS 111

Query: 606 SGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA 665
              +  +          +  +L  +   +T +    +    S  + +  E          
Sbjct: 112 VFPHRSNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECA-------- 163

Query: 666 KHHRRIGLVETYSLTGLYPNTLYYI-WLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVS 724
            H   I     Y     +     +  W   +       +   +            PQ+  
Sbjct: 164 IHFVEI---RCYIDNLHFSGLEEWSDWSPVKQISWIPDSQTKVF-----------PQDKV 209

Query: 725 CEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKK 784
               S  +     +   +    GH     +        D E   + ++N +         
Sbjct: 210 ILVGSDITFCCVSQEKVLSALIGHTNCPLIHL------DGENVAIKIRNISVSASSGTNV 263

Query: 785 WTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEV-----CPTQNDFRKNKKTNGSNF-- 837
                  +         P   P  +     D  E+               + T+ +    
Sbjct: 264 VFTTEDNIFGTVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVES 323

Query: 838 KGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
             G      R +     + +L    L    IY   + A    G    S      T    P
Sbjct: 324 FSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQ-STILVNITEKVYP 382

Query: 898 NRPH 901
           + P 
Sbjct: 383 HTPT 386

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* Length = 414

 Score =  110 bits (276), Expect = 6e-26
 Identities = 51/380 (13%), Positives = 105/380 (27%), Gaps = 45/380 (11%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMV-IQWDEP 505
           L       + + A+                +  +    P +V +     + ++ I     
Sbjct: 72  LNVYEEIKLRIRAEKENTSSWYEVDSFTPFR--KAQIGPPEVHLEAEDKAIVIHISPGTK 129

Query: 506 ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVG-- 563
           ++    + G    Y+       S  E ++ +      I  L+P T Y ++V+A       
Sbjct: 130 DSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWK 189

Query: 564 PGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK 623
            G  S    +KT       P +   V +Q     L W     +    + +   +      
Sbjct: 190 IGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAF------ 243

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
                                      +          + +      +   +      ++
Sbjct: 244 ---------------------------LKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVF 276

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVE 743
              +Y + + A         +  I   T+      PP   +   LS  S  I    P   
Sbjct: 277 QKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPP-VFNIRSLS-DSFHIYIGAPKQS 334

Query: 744 RSNGHIVYYKLQF-VETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGD-- 800
            +   I  Y L + +    + S A    ++ +T   +  LK  T Y +   A T      
Sbjct: 335 GNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLN 394

Query: 801 --GPSSYPITIRTHEDDPSE 818
                S  +  +T   + S+
Sbjct: 395 KSSVFSDAVCEKTKPGNTSK 414

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* Length = 414

 Score = 96.6 bits (239), Expect = 2e-21
 Identities = 56/416 (13%), Positives = 122/416 (29%), Gaps = 49/416 (11%)

Query: 203 APLDVKISEVTATSVRLDWTYPSET--LLYYVIQYKPKAANT--PYSEISGIITTY--YT 256
           +P  V++  +    + L W    E+   + +   Y+    +     S    I +T   ++
Sbjct: 10  SPQKVEVDIIDDNFI-LRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNFS 68

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMV---- 312
              L+ Y E +  I A            +     + +    P +V +     + ++    
Sbjct: 69  SLKLNVYEEIKLRIRAEKENTSSWYEVDSFTPFRKAQI--GPPEVHLEAEDKAIVIHISP 126

Query: 313 -IQWDEPETPNGQI-----------TAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR 360
             +       +G             +    R   +   + +  L P T Y + + A    
Sbjct: 127 GTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLT 186

Query: 361 GEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYP-----NTLYYIWLA 415
                        K   +         ++       + Y L   Y        + ++   
Sbjct: 187 SWKIGVYSPVHCIKTTVENE---LPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAF 243

Query: 416 AQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVR 475
            +   G            +    T     Q ++   +Y + + A         +  I   
Sbjct: 244 LKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFD 303

Query: 476 TKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT------GYKVYYTQDQSLPMSA 529
           T+       P    +R LS S  +     P+              Y++ + ++ S     
Sbjct: 304 TEIQAF-LLPPVFNIRSLSDSFHI-YIGAPKQSGNTPVIQDYPLIYEIIFWENTS----N 357

Query: 530 WETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVG----PGPLSAPVLVKTQQGVPS 581
            E ++++     T+ +L P T+Y ++ +A T           S  V  KT+ G  S
Sbjct: 358 AERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPGNTS 413

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* Length = 414

 Score = 91.2 bits (225), Expect = 1e-19
 Identities = 48/448 (10%), Positives = 115/448 (25%), Gaps = 75/448 (16%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQ--DQSLPMSAWETQVVDNNQLT 541
           +P+ V+V  +     +++W+  +   G +T +   Y +    +    +    +       
Sbjct: 10  SPQKVEVD-IIDDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNF 67

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWS 601
           +   L  +    +R++A                 ++     P      + +   + ++  
Sbjct: 68  SSLKLNVYEEIKLRIRAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPG 127

Query: 602 KPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT 661
                   +      ++    K                               E    + 
Sbjct: 128 TKDSVMWALDGLSFTYSLVIWKNSS--------------------------GVEERIENI 161

Query: 662 YAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG--EGATTPPIPVRTKQYVPGAP 719
           Y              + +  L P T Y + + A        G  +P   ++T       P
Sbjct: 162 Y------------SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPP 209

Query: 720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTS--- 776
           P+N+     +   + + W+      +    V +   F++    +       + +  +   
Sbjct: 210 PENIEVSVQNQNYV-LKWDYTY--ANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKT 266

Query: 777 ---FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS-----EVCPTQNDFR- 827
                   + +   Y + V A         S  I   T            +    + F  
Sbjct: 267 TQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSDSFHI 326

Query: 828 -------KNKKTNGSNFKGGYL-----NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAA 875
                          ++   Y      N             ++ V  L+P T+Y ++  A
Sbjct: 327 YIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARA 386

Query: 876 LTRKGD----GDRSKPETIKTPGGVPNR 899
            T           S     KT  G  ++
Sbjct: 387 HTMDEKLNKSSVFSDAVCEKTKPGNTSK 414

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* Length = 414

 Score = 77.7 bits (190), Expect = 3e-15
 Identities = 52/444 (11%), Positives = 111/444 (25%), Gaps = 73/444 (16%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNGQIT----------------AKHHRRIGLVETYS 340
           +P+ V+V  +     +++W+  +   G +T                +           +S
Sbjct: 10  SPQKVEVD-IIDDNFILRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNFS 68

Query: 341 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYS 400
              L       + + A+                ++    P          + I +  +  
Sbjct: 69  SLKLNVYEEIKLRIRAEKENTSSWYEVDSFTPFRKAQIGP-PEVHLEAEDKAIVIHISPG 127

Query: 401 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQ 460
                   L  +         + ++     +               L P T Y + + A 
Sbjct: 128 TKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIYK----LSPETTYCLKVKAA 183

Query: 461 SPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS-SSTMVIQWDEPETPNGQITGYKVYY 519
                           K       P    +     +   V++WD           +   +
Sbjct: 184 LLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAF 243

Query: 520 TQDQSL-PMSAWETQVVDNNQLTTISDLT----PHTIYTIRVQAFTSVGPGPLSAPVLVK 574
            +      +  W+      N  TT            IY +RVQA         S  +   
Sbjct: 244 LKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFD 303

Query: 575 TQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQE 634
           T+      P     +     +  +    P  SG   +  +                    
Sbjct: 304 TEIQAFLLPPVF-NIRSLSDSFHIYIGAPKQSGNTPVIQDY------------------- 343

Query: 635 TAVTLAWSKPTHSGENIISYEL-YWNDTYAKAKHHRRIGLVET-YSLTGLYPNTLYYIWL 692
                            + YE+ +W +T   +   R+I   +T  ++  L P T+Y +  
Sbjct: 344 ----------------PLIYEIIFWENT---SNAERKIIEKKTDVTVPNLKPLTVYCVKA 384

Query: 693 AAQSPRG----EGATTPPIPVRTK 712
            A +           +  +  +TK
Sbjct: 385 RAHTMDEKLNKSSVFSDAVCEKTK 408

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* Length = 414

 Score = 60.8 bits (146), Expect = 9e-10
 Identities = 41/308 (13%), Positives = 86/308 (27%), Gaps = 33/308 (10%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENI---ISYELYWNDTYAKAKHHRRIGLVE-TY 677
             P+ +  VDI +    L W++   S  N+     Y+    D + K    + I   +  +
Sbjct: 9   KSPQKVE-VDIIDDNFILRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNF 67

Query: 678 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISW 737
           S   L       + + A+                ++   G P  ++  E     +I I  
Sbjct: 68  SSLKLNVYEEIKLRIRAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAED---KAIVIHI 124

Query: 738 EPPPVERSNGHIVYYKLQF-VETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGT 796
            P   +     +      + +   ++ S          +   + +L   T Y + V A  
Sbjct: 125 SPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAAL 184

Query: 797 SIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTN----------GSNFKGGYLNDPM 846
                   Y           +E+ P +N     +  N             F+  +L+  +
Sbjct: 185 LTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFL 244

Query: 847 RFDVSDGGALELNV--------------TGLQPDTIYTIQVAALTRKGDGDRSKPETIKT 892
           + +  +       +                +    IY ++V A         S+     T
Sbjct: 245 KRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDT 304

Query: 893 PGGVPNRP 900
                  P
Sbjct: 305 EIQAFLLP 312

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score =  101 bits (253), Expect = 1e-25
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++ P     +   P   P  + VRP ++  +++ W  P  PN  + GY + Y    
Sbjct: 1   GSSGSSGPENDLDESQVPD-QPSSLHVRPQTNC-IIMSWTPPLNPNIVVRGYIIGYGVG- 57

Query: 524 SLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPG-PLSAPVLVKTQQGVPS 581
                  ET  VD+ Q   +I  L   + Y I ++AF + G G PL      ++    PS
Sbjct: 58  ---SPYAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITSGPS 114

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 91.0 bits (226), Expect = 6e-22
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++ P     +  VP   P ++   P  +  I +SW PP     N  +  Y + +  
Sbjct: 1   GSSGSSGPENDLDESQVPD-QPSSLHVRP-QTNCIIMSWTPP--LNPNIVVRGYIIGYGV 56

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG-PSSYPITIRTHEDDPS 817
                    + +   Q  + ++ L+  + Y I + A  + G+G P     T R+    PS
Sbjct: 57  GSPYAETVRVDS--KQRYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITSGPS 114

Query: 818 E 818
            
Sbjct: 115 S 115

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 71.7 bits (176), Expect = 3e-15
 Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 5/99 (5%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYY 255
            +P  P  + +       + + WT P      +  Y+I Y   +       +      YY
Sbjct: 16  QVPDQPSSLHV-RPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSK-QRYY 73

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
           ++  L   + Y   + A NN G G P   +  T   T  
Sbjct: 74  SIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITSG 112

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 69.0 bits (169), Expect = 3e-14
 Identities = 27/160 (16%), Positives = 44/160 (27%), Gaps = 45/160 (28%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S P     +  VP QP  L                                    
Sbjct: 1   GSSGSSGPENDLDESQVPDQPSSLH----------------------------------- 25

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
                  V  Q   + ++W+ P +    +  Y + +      A+  R       YS+  L
Sbjct: 26  -------VRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIERL 78

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
             ++ Y I L A +  GEG    P+          + P +
Sbjct: 79  ESSSHYVISLKAFNNAGEG---VPLYESATTRSITSGPSS 115

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 68.6 bits (168), Expect = 4e-14
 Identities = 28/121 (23%), Positives = 42/121 (34%), Gaps = 19/121 (15%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA---KHHRRI 333
           G    S P         P   P  + VRP ++  +++ W  P  PN  +      +    
Sbjct: 1   GSSGSSGPENDLDESQVPD-QPSSLHVRPQTNC-IIMSWTPPLNPNIVVRGYIIGYGVGS 58

Query: 334 GLVET---------YSLTGLYPNTLYYIWLAAQSPRGEGATTPPI--PVRTKQYGKTPGF 382
              ET         YS+  L  ++ Y I L A +  GEG    P+     T+     P  
Sbjct: 59  PYAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEG---VPLYESATTRSITSGPSS 115

Query: 383 G 383
           G
Sbjct: 116 G 116

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 42.4 bits (100), Expect = 6e-05
 Identities = 20/113 (17%), Positives = 32/113 (28%), Gaps = 14/113 (12%)

Query: 799 GDGPSSYPITIRTHEDDPS-----EVCPTQN----DFRKNKKTNG--SNFKGGY--LNDP 845
           G   SS P         P       V P  N     +      N     +  GY   +  
Sbjct: 1   GSSGSSGPENDLDESQVPDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPY 60

Query: 846 MRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGD-RSKPETIKTPGGVP 897
                 D      ++  L+  + Y I + A    G+G    +  T ++    P
Sbjct: 61  AETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITSGP 113

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 97.9 bits (244), Expect = 2e-24
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 3/107 (2%)

Query: 476 TKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV 535
           +    P  A  D++V   S S++ + W  P  P+G +  Y+V Y +  +   S+      
Sbjct: 3   SGSSGPP-AVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKT 61

Query: 536 DNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ-GVPS 581
             N+   +  L     Y ++V+A +  G GP       +TQ    PS
Sbjct: 62  SENR-AELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSGPS 107

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 92.5 bits (230), Expect = 1e-22
 Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 3/107 (2%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT 770
           +    P A   ++     S +S+ ++W  P     +G ++ Y++++ E G     +    
Sbjct: 3   SGSSGPPAVS-DIRVTRSSPSSLSLAWAVP--RAPSGAVLDYEVKYHEKGAEGPSSVRFL 59

Query: 771 LKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
             ++    L  LK+   Y + V A +  G GP       +T  D   
Sbjct: 60  KTSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSGP 106

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 71.0 bits (174), Expect = 5e-15
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIIT-TYYT 256
           P A  D++++  + +S+ L W  P      +L Y ++Y  K A  P S      +     
Sbjct: 8   PPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKTSENRAE 67

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
           +R L     Y   + A +  G GP        T     
Sbjct: 68  LRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSG 105

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 65.6 bits (160), Expect = 4e-13
 Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 41/140 (29%)

Query: 575 TQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL-YWNDTYAKPRDLRAVDIQ 633
           +    P    D+R      ++++LAW+ P      ++ YE+ Y       P  +R +   
Sbjct: 3   SGSSGPPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKTS 62

Query: 634 ETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLA 693
           E                                            L GL     Y + + 
Sbjct: 63  ENRAE----------------------------------------LRGLKRGASYLVQVR 82

Query: 694 AQSPRGEGATTPPIPVRTKQ 713
           A+S  G G        +T+ 
Sbjct: 83  ARSEAGYGPFGQEHHSQTQL 102

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 65.2 bits (159), Expect = 4e-13
 Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 15/102 (14%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT--------------AKHHRRI 333
           ++G + P  A  D++V   S S++ + W  P  P+G +               +      
Sbjct: 2   SSGSSGPP-AVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLK 60

Query: 334 GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                  L GL     Y + + A+S  G G        +T+ 
Sbjct: 61  TSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQL 102

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 44.4 bits (105), Expect = 9e-06
 Identities = 10/51 (19%), Positives = 16/51 (31%)

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
             P              + GL+    Y +QV A +  G G   +    +T 
Sbjct: 51  EGPSSVRFLKTSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQ 101

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 96.7 bits (241), Expect = 4e-24
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 475 RTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV 534
            +    P      +     +  ++ + W +PE PNG I  Y++ Y + +    + + + +
Sbjct: 2   SSGSSGPS-TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEH---NEFNSSM 57

Query: 535 VDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581
             +   T  I  L P  +Y ++V+A T  G G  S  +  +T      
Sbjct: 58  ARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDSGP 105

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 89.4 bits (222), Expect = 2e-21
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV 769
            +    P   P  +     +  SI +SW  P  E+ NG I+ Y++++ E   ++  +S+ 
Sbjct: 2   SSGSSGPSTVP-IMHQVSATMRSITLSWPQP--EQPNGIILDYEIRYYEKEHNEFNSSMA 58

Query: 770 TLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE 818
                 +  +D L+    Y + V A T  G G  S  +  +T  D    
Sbjct: 59  R-SQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDSGPS 106

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 69.4 bits (170), Expect = 1e-14
 Identities = 22/100 (22%), Positives = 33/100 (33%), Gaps = 3/100 (3%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P     +     T  S+ L W  P +    +L Y I+Y  K  N   S ++   T    +
Sbjct: 8   PSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARI 67

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
             L P   Y   + A    G G  S      T      ++
Sbjct: 68  DGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDSGPSS 107

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 66.3 bits (162), Expect = 2e-13
 Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 14/101 (13%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT-------------AKHHRRIG 334
           ++G + P      +     +  ++ + W +PE PNG I                      
Sbjct: 2   SSGSSGPS-TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARS 60

Query: 335 LVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
              T  + GL P  +Y + + A++  G G  +  +  +T  
Sbjct: 61  QTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 101

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 65.5 bits (160), Expect = 3e-13
 Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 4/101 (3%)

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL-YWNDTYAKAKHHRRIGLVETYSLTG 681
               +  V     ++TL+W +P      I+ YE+ Y+   + +           T  + G
Sbjct: 10  TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDG 69

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
           L P  +Y + + A++  G G  +  +  +T   +  + P +
Sbjct: 70  LRPGMVYVVQVRARTVAGYGKFSGKMCFQT---LTDSGPSS 107

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 12/48 (25%), Positives = 19/48 (39%)

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           ++        + GL+P  +Y +QV A T  G G  S     +T     
Sbjct: 57  MARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDSG 104

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* Length = 380

 Score =  101 bits (253), Expect = 3e-23
 Identities = 44/387 (11%), Positives = 91/387 (23%), Gaps = 69/387 (17%)

Query: 446 ALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVR-PLSSSTMVIQWDE 504
            L    LY   ++        + T               P+D ++  P     + +QW  
Sbjct: 5   CLAVGCLYTFLISTTFGCTSSSDTEIKV---------NPPQDFEIVDPGYLGYLYLQWQP 55

Query: 505 PETPNGQ---ITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF-- 559
           P + +        Y++ Y    S     W+T +  N       DL       I       
Sbjct: 56  PLSLDHFKECTVEYELKYRNIGS---ETWKTIITKNLHYKDGFDLNKGIEAXIHTLLPWQ 112

Query: 560 ---TSVGPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL 615
               S      +      + QG   +  +D+  V      +  +W        +      
Sbjct: 113 CTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGVLLDTNYNLF 172

Query: 616 YWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE 675
           YW +                          +   +  +    +                 
Sbjct: 173 YWYEGLDHALQ----------------CVDYIKADGQNIGCRFPYLE------------- 203

Query: 676 TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRI 735
                       +YI +   S       +     + +  V   PP  ++    SS  I++
Sbjct: 204 ------ASDYKDFYICVNGSSENK-PIRSSYFTFQLQNIVKPLPPVYLTFTRESSCEIKL 256

Query: 736 SWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAG 795
            W  P           Y+++     R D    +       ++ L    +  +    V + 
Sbjct: 257 KWSIPL-GPIPARCFDYEIEI----REDDTTLVTATVENETYTLKTTNETRQLCFVVRSK 311

Query: 796 TSIGDGPSSY------PITIRTHEDDP 816
            +I                    +   
Sbjct: 312 VNIYCSDDGIWSEWSDKQCWEGEDLSK 338

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* Length = 380

 Score = 71.8 bits (175), Expect = 3e-13
 Identities = 36/310 (11%), Positives = 70/310 (22%), Gaps = 36/310 (11%)

Query: 624 PRDLRAVDIQETA-VTLAWSKPT---HSGENIISYELYWNDTYAKAKHHRRIGLVETYSL 679
           P+D   VD      + L W  P    H  E  + YEL + +  ++         +     
Sbjct: 35  PQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTIITKNLHYKDG 94

Query: 680 TGLYPNTLYYIW--LAAQSPRGEGATTPPIPVRTKQYVPG---APPQNVSCEPLSSTSIR 734
             L       I   L  Q   G    +            G      Q++ C   +   + 
Sbjct: 95  FDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLL 154

Query: 735 ISWEPPPVE-RSNGHIVYYKLQFVETGRSDSEASIVTLKNQT-SFVLDELKKWTEYRIWV 792
            SW+P         + ++Y  + ++      +      +N    F   E   + ++ I V
Sbjct: 155 CSWKPGIGVLLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICV 214

Query: 793 LAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTN---------GSNFKGG--- 840
              +       S   T +          P        + +                    
Sbjct: 215 NGSSENK-PIRSSYFTFQLQNIVKPL--PPVYLTFTRESSCEIKLKWSIPLGPIPARCFD 271

Query: 841 ----YLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDR------SKPETI 890
                  D      +        +            V +       D       S  +  
Sbjct: 272 YEIEIREDDTTLVTATVENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCW 331

Query: 891 KTPGGVPNRP 900
           +         
Sbjct: 332 EGEDLSKKTL 341

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* Length = 380

 Score = 69.4 bits (169), Expect = 1e-12
 Identities = 35/312 (11%), Positives = 78/312 (25%), Gaps = 39/312 (12%)

Query: 281 PSSPAVITTGETEPGTAPRDVQVR-PLSSSTMVIQWDEPETPNG--------QITAKHH- 330
            +     ++        P+D ++  P     + +QW  P + +         ++  ++  
Sbjct: 18  TTFGCTSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIG 77

Query: 331 ------RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGE 384
                      +       L       I          G+        T  +    G  E
Sbjct: 78  SETWKTIITKNLHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPE 137

Query: 385 QAAKHHRRIGLVETYSLTGL----------YPNTLYYIWLAAQSPRGEGATTPPIPVRTK 434
              +          Y+   L            +T Y ++   +           I    +
Sbjct: 138 TXVQDMD----CVYYNWQYLLCSWKPGIGVLLDTNYNLFYWYEGLDHALQCVDYIKADGQ 193

Query: 435 QYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS 494
             G    F          +YI +   S       +     + +       P  +     S
Sbjct: 194 NIGCR--FPYLEASDYKDFYICVNGSSENK-PIRSSYFTFQLQNIVKPLPPVYLTFTRES 250

Query: 495 SSTMVIQWDEPETPNGQIT-GYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT 553
           S  + ++W  P  P       Y++   +D +       T  V+N    T+          
Sbjct: 251 SCEIKLKWSIPLGPIPARCFDYEIEIREDDT----TLVTATVENET-YTLKTTNETRQLC 305

Query: 554 IRVQAFTSVGPG 565
             V++  ++   
Sbjct: 306 FVVRSKVNIYCS 317

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* Length = 380

 Score = 61.7 bits (149), Expect = 4e-10
 Identities = 25/207 (12%), Positives = 47/207 (22%), Gaps = 20/207 (9%)

Query: 170 NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLL 229
           +         G    S+  +     +P         D+         +   W      LL
Sbjct: 106 HTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGVLL 165

Query: 230 Y--YVIQYKPKAANT-----PYSEISGIITTYY-TVRNLSPYTEYEFYIIAVNNLGRGPP 281
              Y + Y  +  +       Y +  G            S Y ++   +   +       
Sbjct: 166 DTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENK-PIR 224

Query: 282 SSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT-----------AKHH 330
           SS              P  +     SS  + ++W  P  P                    
Sbjct: 225 SSYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLV 284

Query: 331 RRIGLVETYSLTGLYPNTLYYIWLAAQ 357
                 ETY+L            + ++
Sbjct: 285 TATVENETYTLKTTNETRQLCFVVRSK 311

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* Length = 380

 Score = 48.3 bits (114), Expect = 8e-06
 Identities = 34/231 (14%), Positives = 58/231 (25%), Gaps = 31/231 (13%)

Query: 702 ATTPPIPVRTKQYVPGAPPQNVSCEPLSSTS-IRISWEPPPVERSNGHI-VYYKLQFVET 759
           +TT      +   +   PPQ+           + + W+PP          V Y+L++   
Sbjct: 17  STTFGCTSSSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNI 76

Query: 760 GRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLA---------GTSIGDGPSSYPITIR 810
           G    +   +  KN       +L K  E  I  L            S     + +     
Sbjct: 77  GSETWK--TIITKNLHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQG 134

Query: 811 THEDDPSEV-C-------------PTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGAL 856
             E    ++ C             P               ++G          +   G  
Sbjct: 135 IPETXVQDMDCVYYNWQYLLCSWKPGIGVLLDTNYNLFYWYEGLDHALQCVDYIKADGQN 194

Query: 857 E---LNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPHVNL 904
                          + I V   + +    RS   T +    V   P V L
Sbjct: 195 IGCRFPYLEASDYKDFYICVNG-SSENKPIRSSYFTFQLQNIVKPLPPVYL 244

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* Length = 380

 Score = 45.6 bits (107), Expect = 6e-05
 Identities = 40/317 (12%), Positives = 86/317 (27%), Gaps = 59/317 (18%)

Query: 37  PRDVQVR-PLSSSTMVIQWDEPETPNG----------QITHPPTRAARSHA----RLAAQ 81
           P+D ++  P     + +QW  P + +           +  +  +   ++           
Sbjct: 35  PQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTIITKNLHYKDG 94

Query: 82  SVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVML-----DSPLNLSCVA------- 129
             L +G  A     +           S        +           ++ CV        
Sbjct: 95  FDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLL 154

Query: 130 ----VGSPMP-------FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCI---- 174
                G  +        F  +    +     D     G+N+       E+ +Y       
Sbjct: 155 CSWKPGIGVLLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICV 214

Query: 175 -AASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETL----L 229
             +S    I +S            L     P+ +  +  ++  ++L W+ P   +     
Sbjct: 215 NGSSENKPIRSSYFTFQLQNIVKPL----PPVYLTFTRESSCEIKLKWSIPLGPIPARCF 270

Query: 230 YYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNL---GRGPPS--SP 284
            Y I+ +    +T     +    TY T++  +   +  F + +  N+     G  S  S 
Sbjct: 271 DYEIEIRED--DTTLVTATVENETY-TLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSD 327

Query: 285 AVITTGETEPGTAPRDV 301
                GE          
Sbjct: 328 KQCWEGEDLSKKTLLRF 344

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 93.6 bits (233), Expect = 7e-23
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 4/120 (3%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++     R     P   P  +    L  +++ + W EP      + GY V Y    
Sbjct: 1   GSSGSSGSHDSRLTAGVPD-TPTRLVFSALGPTSLRVSWQEPR-CERPLQGYSVEYQLLN 58

Query: 524 SLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPG-PLSAPVLVKTQQGVPSQ 582
              +            +  + DL P+  Y  RV+A +  G G      + +++Q   PS 
Sbjct: 59  GGELHRLNIPNPAQTSVV-VEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVSGPSS 117

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 90.9 bits (226), Expect = 5e-22
 Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 5/120 (4%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++     R    VP   P  +    L  TS+R+SW+ P   R    +  Y +++  
Sbjct: 1   GSSGSSGSHDSRLTAGVPD-TPTRLVFSALGPTSLRVSWQEP---RCERPLQGYSVEYQL 56

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG-PSSYPITIRTHEDDPS 817
               +     +    QTS V+++L     Y   V A +  G G      ITI +    PS
Sbjct: 57  LNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVSGPS 116

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 82.8 bits (205), Expect = 5e-19
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 3/99 (3%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSE--TLLYYVIQYKPKAANTPYS-EISGIITTYY 255
            +P  P  +  S +  TS+R+ W  P     L  Y ++Y+       +   I     T  
Sbjct: 16  GVPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNIPNPAQTSV 75

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
            V +L P   Y F + A +  G G      +    +   
Sbjct: 76  VVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVSG 114

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 74.4 bits (183), Expect = 3e-16
 Identities = 26/159 (16%), Positives = 43/159 (27%), Gaps = 42/159 (26%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S     +   GVP  P  L    +  T++ ++W +P      +  Y + +     
Sbjct: 1   GSSGSSGSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERP-LQGYSVEYQLLNG 59

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
              +L  ++I   A T                                     +  +  L
Sbjct: 60  G--ELHRLNIPNPAQT-------------------------------------SVVVEDL 80

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721
            PN  Y   + AQS  G G     +     Q     P  
Sbjct: 81  LPNHSYVFRVRAQSQEGWGREREGVITIESQ--VSGPSS 117

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 62.0 bits (151), Expect = 7e-12
 Identities = 18/113 (15%), Positives = 30/113 (26%), Gaps = 16/113 (14%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT---------- 326
           G    S           P   P  +    L  +++ + W EP      +           
Sbjct: 1   GSSGSSGSHDSRLTAGVPD-TPTRLVFSALGPTSLRVSWQEPR-CERPLQGYSVEYQLLN 58

Query: 327 ----AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                + +       +  +  L PN  Y   + AQS  G G     +     Q
Sbjct: 59  GGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQ 111

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 47.8 bits (114), Expect = 7e-07
 Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 21/119 (17%)

Query: 799 GDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKT-----------NGS------NFKGGY 841
           G   SS     R     P    PT+  F     T                     ++   
Sbjct: 1   GSSGSSGSHDSRLTAGVPDT--PTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLN 58

Query: 842 LNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
             +  R ++ +     + V  L P+  Y  +V A +++G G     E + T     + P
Sbjct: 59  GGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGRER--EGVITIESQVSGP 115

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* Length = 314

 Score = 98.4 bits (244), Expect = 1e-22
 Identities = 38/352 (10%), Positives = 102/352 (28%), Gaps = 67/352 (19%)

Query: 485 PRDVQVRPLSSSTMVIQWDEPETPNGQIT-GYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
             ++ V   +  T++  W+ PE  +   +  Y  ++           + ++    + +  
Sbjct: 7   VTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDK-------QDKKIAPETRRSIE 59

Query: 544 SDLTPHTIYTIRVQAFTSVG--PGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWS 601
             L       +  Q  T+    P  L    +   +    S   +L+ +    + +  +W 
Sbjct: 60  VPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWL 119

Query: 602 KPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT 661
              ++  +      YW+                            S E I   E  +   
Sbjct: 120 PGRNTSPDTNYTLYYWHR---------------------------SLEKIHQCENIF--- 149

Query: 662 YAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721
               +  +  G     +         + + +  +   G+   +  I V     V   PP 
Sbjct: 150 ----REGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNI-VPLTSRVKPDPPH 204

Query: 722 NVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQF------------VETGRSDSEASIV 769
             +     +  + + WE P         ++Y+++             V+  + ++     
Sbjct: 205 IKNLSF-HNDDLYVQWENPQ--NFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFER 261

Query: 770 TLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPS-------SYPITIRTHED 814
            ++N + F++  +   T   + +   T+             S  ++I    +
Sbjct: 262 NVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKRN 313

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* Length = 314

 Score = 76.1 bits (186), Expect = 6e-15
 Identities = 35/291 (12%), Positives = 80/291 (27%), Gaps = 34/291 (11%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
             +L         V   W+ P  +  N     L++   +   +  +            L 
Sbjct: 7   VTNLSVSVENLCTVIWTWNPPEGASSN---CSLWYFSHFGDKQDKKIAPETRRSIEVPLN 63

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTK-QYVPGAPPQNVSCEPLSSTSIRISWEPPPV 742
                 +     +   E  +       +  +  P +    + C   + + ++ SW P   
Sbjct: 64  ERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRN 123

Query: 743 E-RSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDEL--KKWTEYRIWVLAGTSIG 799
                 + +YY  + +E                 SF L ++    + ++ + ++   + G
Sbjct: 124 TSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAG 183

Query: 800 DGPSSYPITIRTHEDDPS------------------EVCPTQNDFR---------KNKKT 832
               S+ I   T    P                   E                     +T
Sbjct: 184 KIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTET 243

Query: 833 NGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGD 883
           +   +      +   F+ +        V G+ PDT+ T+++   T K   +
Sbjct: 244 HNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYE 294

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* Length = 314

 Score = 66.1 bits (160), Expect = 9e-12
 Identities = 35/299 (11%), Positives = 86/299 (28%), Gaps = 39/299 (13%)

Query: 292 TEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVE---------TYSLT 342
           TE      ++ V   +  T++  W+ PE  +   +  +    G  +              
Sbjct: 1   TETQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEV 60

Query: 343 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLT 402
            L       +     +   E  +       +       G  E A    +       ++L+
Sbjct: 61  PLNERICLQVGSQCSTNESEKPSILVEKCISP----PEGDPESAVTELQ----CIWHNLS 112

Query: 403 GLY---------PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLY 453
            +               Y          +      I    + +G +    +        +
Sbjct: 113 YMKCSWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQH 172

Query: 454 YIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT 513
            + +  +   G+   +  I   T + +P   P    +    +  + +QW+ P+    +  
Sbjct: 173 SVQIMVKDNAGKIKPSFNIVPLTSRVKPD-PPHIKNLSF-HNDDLYVQWENPQNFISRCL 230

Query: 514 GYKVYYTQDQS-----------LPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS 561
            Y+V     Q+              +    + V+N     +  + P T+ T+R++  T+
Sbjct: 231 FYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTN 289

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* Length = 314

 Score = 61.5 bits (148), Expect = 3e-10
 Identities = 33/258 (12%), Positives = 76/258 (29%), Gaps = 35/258 (13%)

Query: 444 EQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTK-QYEPGTAPRDVQVRPLSSSTMVIQW 502
           E  L       +     +   E  +       +  + +P +A  ++Q    + S M   W
Sbjct: 59  EVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSW 118

Query: 503 DEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTP-----HTIYTIRVQ 557
             P       T Y +YY       +   E    +        DLT         +++++ 
Sbjct: 119 -LPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIM 177

Query: 558 AFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 617
              + G    S  ++  T +  P  P     +      + + W  P +     + YE+  
Sbjct: 178 VKDNAGKIKPSFNIVPLTSRVKPDPPHIKN-LSFHNDDLYVQWENPQNFISRCLFYEVEV 236

Query: 618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETY 677
           N++  +  ++  V   +           ++                             +
Sbjct: 237 NNSQTETHNVFYVQEAKCENPEFERNVENT---------------------------SCF 269

Query: 678 SLTGLYPNTLYYIWLAAQ 695
            + G+ P+TL  + +  +
Sbjct: 270 MVPGVLPDTLNTVRIRVK 287

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* Length = 314

 Score = 61.5 bits (148), Expect = 3e-10
 Identities = 21/186 (11%), Positives = 47/186 (25%), Gaps = 21/186 (11%)

Query: 204 PLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPY 263
             ++ +S     +V   W  P        + Y     +    +I+   T       L+  
Sbjct: 7   VTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIA-PETRRSIEVPLNER 65

Query: 264 TEYEFYIIAVNNLGRGP-PSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPN 322
              +       N    P       I+  E +P +A  ++Q    + S M   W      +
Sbjct: 66  ICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTS 125

Query: 323 GQITA-------------------KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG 363
                                   +  +  G     +         + + +  +   G+ 
Sbjct: 126 PDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKI 185

Query: 364 ATTPPI 369
             +  I
Sbjct: 186 KPSFNI 191

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* Length = 314

 Score = 52.6 bits (125), Expect = 2e-07
 Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 8/102 (7%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF 777
            P  N+S    +  ++  +W PP    SN  + Y+      +   D +   +  + + S 
Sbjct: 5   PPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYF------SHFGDKQDKKIAPETRRSI 58

Query: 778 VLDELKKWTEYRIWVLAGTSIGDGPSSY-PITIRTHEDDPSE 818
            +  L +    ++     T+  + PS      I   E DP  
Sbjct: 59  EVP-LNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPES 99

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* Length = 314

 Score = 48.0 bits (113), Expect = 7e-06
 Identities = 33/284 (11%), Positives = 71/284 (25%), Gaps = 44/284 (15%)

Query: 31  TEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT--------HPPTRAARSHARLAAQS 82
           TE      ++ V   +  T++  W+ PE  +   +            +      R + + 
Sbjct: 1   TETQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEV 60

Query: 83  VLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVML-DSPLNLSCVAVGSPMPFVKWRK 141
            L          Q +      P        +  E     +   L C+          W  
Sbjct: 61  PLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLP 120

Query: 142 GQN-----------------IELTPDDKLPVGRNVLTLDRVT--ESENYTCIAASVLGVI 182
           G+N                      ++    G+       +T  +  ++   +  ++   
Sbjct: 121 GRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKD 180

Query: 183 ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETL---LYYVIQYKPKA 239
               I            +   P  +K        + + W  P   +   L+Y ++     
Sbjct: 181 NAGKIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQ 240

Query: 240 AN-------------TPYSEISGIITTYYTVRNLSPYTEYEFYI 270
                           P  E +   T+ + V  + P T     I
Sbjct: 241 TETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRI 284

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 92.2 bits (229), Expect = 2e-22
 Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET-------LLYYVIQYKPKAANTPYSEISGII 251
           T  + P+ V+   +T  +VR+ W   S         +  Y ++++   + +   +     
Sbjct: 17  TPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTT 76

Query: 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
           +  YT   L P T YEF ++   N      S  A  TT E    ++
Sbjct: 77  SLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASGPSS 122

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 88.8 bits (220), Expect = 4e-21
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 4/119 (3%)

Query: 701 GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERS--NGHIVYYKLQFVE 758
           G++  P  V      P  PP  V    L+  ++R+SW    V ++     +  Y +++  
Sbjct: 4   GSSGFPTSVPDLS-TPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRT 62

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
           +  + ++          S+    LK  T Y   V+   +      S      T+E    
Sbjct: 63  SFSASAKYKSED-TTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASGP 120

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 87.6 bits (217), Expect = 1e-20
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 3/118 (2%)

Query: 466 GATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYT-QDQS 524
           G++  P  V      P   P  VQ   L+   + + W +   P  Q T     YT + ++
Sbjct: 4   GSSGFPTSVPDLS-TPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRT 62

Query: 525 LPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581
              ++ + +  D   L+ T + L P+T+Y   V    +      S      T +    
Sbjct: 63  SFSASAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASGP 120

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 64.9 bits (158), Expect = 1e-12
 Identities = 23/116 (19%), Positives = 35/116 (30%), Gaps = 17/116 (14%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT---------- 326
           G    S         + P   P  VQ   L+   + + W +   P  Q T          
Sbjct: 1   GSSGSSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRW 60

Query: 327 -------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                  AK+        +Y+ TGL PNT+Y   +     R     +      T +
Sbjct: 61  RTSFSASAKYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYE 116

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 61.0 bits (148), Expect = 2e-11
 Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 5/101 (4%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIIS----YELYWNDTYAKAKHHRRIGLVET-YS 678
           P  ++AV +   AV ++W+  +       S    Y + W  +++ +  ++        Y+
Sbjct: 22  PVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTTSLSYT 81

Query: 679 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
            TGL PNT+Y   +     R     +      T +    + 
Sbjct: 82  ATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASGPSS 122

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 11/51 (21%), Positives = 18/51 (35%)

Query: 847 RFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           ++   D  +L    TGL+P+T+Y   V     +     S      T     
Sbjct: 69  KYKSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASG 119

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 91.8 bits (228), Expect = 3e-22
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 3/109 (2%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERS--NGHIVYYKLQFVETGRSDSEASI 768
           +    P  PP  V    LS  +IRI+W    + +        YY +++     ++++   
Sbjct: 3   SGSSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN 62

Query: 769 VTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
                  S+++  LK  T Y   V+          S      T E    
Sbjct: 63  AN-ATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELSGP 110

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 89.5 bits (222), Expect = 2e-21
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 2/110 (1%)

Query: 476 TKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYT-QDQSLPMSAWETQV 534
           +    P   P  VQ   LS  T+ I W +   P  Q      YYT + ++   +  + + 
Sbjct: 3   SGSSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN 62

Query: 535 VDNNQL-TTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
            +   L   ++ L P+T+Y   V           S      T +      
Sbjct: 63  ANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELSGPSS 112

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 89.1 bits (221), Expect = 2e-21
 Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-------LLYYVIQYKPKAANTPYSEISGIITT 253
            + P+ V+ S ++  ++R+ W   S           YY +++K         + +   T 
Sbjct: 9   MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTL 68

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
            Y V  L P T YEF ++          S  A  TT E    ++
Sbjct: 69  SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELSGPSS 112

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 65.6 bits (160), Expect = 4e-13
 Identities = 24/105 (22%), Positives = 35/105 (33%), Gaps = 17/105 (16%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT-----------------AKHH 330
           ++G + P   P  VQ   LS  T+ I W +   P  Q                    K+ 
Sbjct: 2   SSGSSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYK 61

Query: 331 RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                  +Y +TGL PNTLY   +     R     +      T +
Sbjct: 62  NANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 106

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 61.0 bits (148), Expect = 1e-11
 Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 5/101 (4%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIIS----YELYWNDTYAKAKHHRRIGLVET-YS 678
           P  ++A  +    + + W+  +      I+    Y + W         ++        Y 
Sbjct: 12  PVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYL 71

Query: 679 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
           +TGL PNTLY   +     R     +      T +    + 
Sbjct: 72  VTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELSGPSS 112

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 47.5 bits (113), Expect = 8e-07
 Identities = 11/51 (21%), Positives = 19/51 (37%)

Query: 847 RFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           ++  ++   L   VTGL+P+T+Y   V     +     S      T     
Sbjct: 59  KYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELSG 109

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 91.6 bits (228), Expect = 3e-22
 Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 4/102 (3%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITTY 254
           + P  P    +++   T + L W+ PS T     + Y+++ + + +   +          
Sbjct: 6   SGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLA 65

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGT 296
           YTV+NL   T+Y+F +IA N+ G+  PS     TT      +
Sbjct: 66  YTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGPS 107

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 6/110 (5%)

Query: 476 TKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQV 534
           +    P   P    +     + + +QW +P          Y +   ++ S          
Sbjct: 3   SGSSGPS-MPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETS---GYGFKPK 58

Query: 535 VDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
            D   L  T+ +L   T Y  +V A+ S G    S  V   T        
Sbjct: 59  YDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGPSS 108

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 7/106 (6%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASI 768
           +    P   P +        T + + W  P           + Y L+  E          
Sbjct: 3   SGSSGPS-MPASPVLTKAGITWLSLQWSKPS---GTPSDEGISYILEMEEETSGYGFKPK 58

Query: 769 VTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814
              +   ++ +  L++ T+Y+  V+A  S G    S  +   T  D
Sbjct: 59  YDGE-DLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 2/98 (2%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSG-ENIISYELYWNDTYAKAKHHRRIGLVET-YSLTG 681
           P          T ++L WSKP+ +  +  ISY L   +  +      +    +  Y++  
Sbjct: 11  PASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKN 70

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
           L  +T Y   + A +  G+   +  +   T      + 
Sbjct: 71  LRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGPSS 108

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 94.3 bits (234), Expect = 4e-22
 Identities = 30/204 (14%), Positives = 64/204 (31%), Gaps = 23/204 (11%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
              +     Q  +  + W+ P     +I  Y L W    +  +       G + +Y++ G
Sbjct: 5   EVFITETPSQPNSHPIQWNAP--QPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKG 62

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP--------------PQNVSCEP 727
           L P  +Y   L +    G    T      T    P                   + S   
Sbjct: 63  LKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTE 122

Query: 728 LSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTE 787
           ++++S  +SW           +  +++++  +   D    +      TS  + +L    +
Sbjct: 123 ITASSFVVSWVSAS-----DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRK 177

Query: 788 YRIWVLAGTSIGDGPSSYPITIRT 811
           Y + V   +  G+       +  T
Sbjct: 178 YIVNVYQISEDGEQSLILSTSQTT 201

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 93.2 bits (231), Expect = 1e-21
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 27/198 (13%)

Query: 203 APLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEIS-GIITTYYTVRNL 260
             + +  +     S  + W  P    +  Y+++++PK +   + E +       YT++ L
Sbjct: 4   VEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGL 63

Query: 261 SPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA--------------PRDVQVRPL 306
            P   YE  +I++   G    +     TT  + P T+                   V  +
Sbjct: 64  KPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEI 123

Query: 307 SSSTMVIQWDEPETP-----------NGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLA 355
           ++S+ V+ W                       ++        + ++  L P   Y + + 
Sbjct: 124 TASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVY 183

Query: 356 AQSPRGEGATTPPIPVRT 373
             S  GE +        T
Sbjct: 184 QISEDGEQSLILSTSQTT 201

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 83.2 bits (205), Expect = 3e-18
 Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 36/233 (15%)

Query: 483 TAPRDVQVR--PLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL 540
           + P +V +   P   ++  IQW+ P+     I+ Y + +    S+    W+   +  +  
Sbjct: 1   SGPVEVFITETPSQPNSHPIQWNAPQ--PSHISKYILRWRPKNSV--GRWKEATIPGHLN 56

Query: 541 T-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLA 599
           + TI  L P  +Y  ++ +    G   ++      T    P     +             
Sbjct: 57  SYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGET--------T 108

Query: 600 WSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN-IISYELYW 658
              P                           +I  ++  ++W   + +     + YEL  
Sbjct: 109 PFSPLV------------------ATSESVTEITASSFVVSWVSASDTVSGFRVEYELSE 150

Query: 659 NDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
                  ++        + ++  L P   Y + +   S  GE +        T
Sbjct: 151 EGDE--PQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 201

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 79.7 bits (196), Expect = 5e-17
 Identities = 26/202 (12%), Positives = 50/202 (24%), Gaps = 32/202 (15%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
               ++  P    S  I W  P       HI  Y L++                +  S+ 
Sbjct: 4   VEVFITETPSQPNSHPIQWNAP----QPSHISKYILRWRPKNSVGRWKEATIPGHLNSYT 59

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFK 838
           +  LK    Y   +++    G    +      T    P        +         ++  
Sbjct: 60  IKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSES 119

Query: 839 --------------------GGYL--------NDPMRFDVSDGGALELNVTGLQPDTIYT 870
                                G+          D  ++      A  +N+  L P   Y 
Sbjct: 120 VTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYI 179

Query: 871 IQVAALTRKGDGDRSKPETIKT 892
           + V  ++  G+       +  T
Sbjct: 180 VNVYQISEDGEQSLILSTSQTT 201

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 72.4 bits (177), Expect = 2e-14
 Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 14/167 (8%)

Query: 137 VKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTC--IAASVLGVIETSTIVKVQCKY 194
           ++WR   ++    +  +P   N  T+  +     Y    I+    G  E +         
Sbjct: 35  LRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTST 94

Query: 195 APLLTL-----------PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTP 243
           +  +T            P+      ++E+TA+S  + W   S+T+  + ++Y+       
Sbjct: 95  STPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDE 154

Query: 244 YSEIS-GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
              +      T   + +L P  +Y   +  ++  G          TT
Sbjct: 155 PQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 201

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 69.3 bits (169), Expect = 2e-13
 Identities = 25/144 (17%), Positives = 46/144 (31%), Gaps = 20/144 (13%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTA--------------PRDVQVRP 492
           L P  +Y   L +    G    T      T    P T+                   V  
Sbjct: 63  LKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTE 122

Query: 493 LSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTI 551
           +++S+ V+ W    + +  ++G++V Y   +       +   + +   +  I DL P   
Sbjct: 123 ITASSFVVSW---VSASDTVSGFRVEYELSEEG--DEPQYLDLPSTATSVNIPDLLPGRK 177

Query: 552 YTIRVQAFTSVGPGPLSAPVLVKT 575
           Y + V   +  G   L       T
Sbjct: 178 YIVNVYQISEDGEQSLILSTSQTT 201

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 33/201 (16%), Positives = 57/201 (28%), Gaps = 20/201 (9%)

Query: 296 TAPRDVQVR--PLSSSTMVIQWDEPET------------PNGQITAKHHRRIGLVETYSL 341
           + P +V +   P   ++  IQW+ P+              N     K     G + +Y++
Sbjct: 1   SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTI 60

Query: 342 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSL 401
            GL P  +Y   L +    G    T      T                     +  + S+
Sbjct: 61  KGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESV 120

Query: 402 TGLYPNTLYYIWLAAQSPRGEGATT--PPIPVRTKQYGKTPGFGEQA----LYPNTLYYI 455
           T +  ++    W++A                    QY   P          L P   Y +
Sbjct: 121 TEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIV 180

Query: 456 WLAAQSPRGEGATTPPIPVRT 476
            +   S  GE +        T
Sbjct: 181 NVYQISEDGEQSLILSTSQTT 201

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 127

 Score = 90.1 bits (224), Expect = 1e-21
 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 10/111 (9%)

Query: 200 LPVAPLDVKISEVTATSVRLDWTYPSE---TLLYYVIQYKPKAANT----PYSEISGIIT 252
           +P  P D+++++    SV+L WT   +    +  ++I+Y+            +E+SG  T
Sbjct: 16  VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSG--T 73

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGETEPGTAPRDVQ 302
                 NLSPY  Y F ++AVN++G+  PS       T  +EP   P    
Sbjct: 74  QTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGP 124

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 127

 Score = 67.4 bits (165), Expect = 1e-13
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 1/119 (0%)

Query: 466 GATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSL 525
           G++    P     Y+    P D+++      ++ + W   +  N  IT + + Y      
Sbjct: 1   GSSGSSGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHK 60

Query: 526 PMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVL-VKTQQGVPSQP 583
           P        V   Q T   +L+P+  Y+ RV A  S+G    S       T+   P + 
Sbjct: 61  PGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKN 119

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 127

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 10/124 (8%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQF 756
           G   ++ P P      VP  PP ++        S+++SW P      + +  I  + +++
Sbjct: 1   GSSGSSGPTPA-PVYDVPN-PPFDLELTDQLDKSVQLSWTPG----DDNNSPITKFIIEY 54

Query: 757 VETGRSDSE-ASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPI-TIRTHED 814
            +             +    +     L  +  Y   V+A  SIG    S       T   
Sbjct: 55  EDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114

Query: 815 DPSE 818
           +P +
Sbjct: 115 EPDK 118

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 127

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 4/105 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLV---ETYSLT 680
           P DL   D  + +V L+W+    +   I  + + + D   K         V   +T +  
Sbjct: 20  PFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQL 79

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPI-PVRTKQYVPGAPPQNVS 724
            L P   Y   + A +  G+   +       TK   P   P +  
Sbjct: 80  NLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGP 124

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 89.0 bits (221), Expect = 3e-21
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE---TLLYYVIQYK 236
           G         + C+       P  P   +I+  T  S+ L W  PS+    +  +V+++ 
Sbjct: 4   GSSGAEIFTTLSCE-------PDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWD 56

Query: 237 PKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGETEPG 295
               N  + +        + +  LSP    +F + A N+ G    S      T+G + P 
Sbjct: 57  EGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSGPS 116

Query: 296 T 296
           +
Sbjct: 117 S 117

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 66.7 bits (163), Expect = 2e-13
 Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 5/118 (4%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++      T   EP   P   ++   + +++ +QW  P     +I  + + + + +
Sbjct: 1   GSSGSSGAEIFTTLSCEPD-IPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGK 59

Query: 524 SLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
               +    Q    +Q    I+ L+P      R+ A    G    S  VL  T     
Sbjct: 60  G---NGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSG 114

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 60.1 bits (146), Expect = 4e-11
 Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 4/118 (3%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++      T    P   P        +  S+ + W+ P    +   I  + L++ +
Sbjct: 1   GSSGSSGAEIFTTLSCEPD-IPNPPRIANRTKNSLTLQWKAP--SDNGSKIQNFVLEW-D 56

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
            G+ + E     + +Q  F + +L      +  + A    G    S  +   T     
Sbjct: 57  EGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSG 114

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 51.2 bits (123), Expect = 4e-08
 Identities = 22/158 (13%), Positives = 43/158 (27%), Gaps = 43/158 (27%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S   +  T    P  P   R  +  + ++TL W  P+ +G  I ++ L W++   
Sbjct: 1   GSSGSSGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKG 60

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
                +     +                                          + +T L
Sbjct: 61  NGEFCQCYMGSQK----------------------------------------QFKITKL 80

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
            P       L+A++  G    +  +   T      + P
Sbjct: 81  SPAMGCKFRLSARNDYGTSGFSEEVLYYT---SGCSGP 115

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 44.7 bits (106), Expect = 9e-06
 Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 14/110 (12%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA--------- 327
           G    S   + TT   EP   P   ++   + +++ +QW  P     +I           
Sbjct: 1   GSSGSSGAEIFTTLSCEPD-IPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGK 59

Query: 328 ----KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
                    +G  + + +T L P       L+A++  G    +  +   T
Sbjct: 60  GNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT 109

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A Length = 419

 Score = 95.8 bits (237), Expect = 5e-21
 Identities = 51/361 (14%), Positives = 97/361 (26%), Gaps = 60/361 (16%)

Query: 471 PIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETP------NGQITGYKVYYTQDQS 524
            + V   Q+     PRD+Q+        ++ W            +     ++V Y + Q 
Sbjct: 98  RLTVTLTQHVQPPEPRDLQIST-DQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD 156

Query: 525 LPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
                    + + +Q T     L P + Y  RV+   + G      P             
Sbjct: 157 -SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRP------------- 202

Query: 584 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK 643
                                 S  +            A+P++L         ++ +W  
Sbjct: 203 ----------------------SKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEV 240

Query: 644 PTHSGENIISYELYWNDTYAKAKHHRRIG-LVETYSLTGLYPNTLYYIWLAAQSPRGEG- 701
                 ++     Y     A +    R               +T ++  +    P   G 
Sbjct: 241 RKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQ 300

Query: 702 ------ATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQ 755
                        +++   +  APP           S  + WE     R       +++Q
Sbjct: 301 YIVSVQPRRAEKHIKSSVNIQMAPPSLQV--TKDGDSYSLRWETMK-MRYEHIDHTFEIQ 357

Query: 756 FVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPS-----SYPITIR 810
           + +   +  ++   TL+N  S  L  L+  T Y   V   TS           S   +  
Sbjct: 358 YRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWD 417

Query: 811 T 811
           T
Sbjct: 418 T 418

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A Length = 419

 Score = 68.1 bits (165), Expect = 4e-12
 Identities = 48/398 (12%), Positives = 105/398 (26%), Gaps = 62/398 (15%)

Query: 227 TLLYYVIQYKPKAANTPYSEISGIIT-TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP- 284
           TL+  V +   +  +   S+        +            + +++   +     P  P 
Sbjct: 36  TLIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPL 95

Query: 285 ---AVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETP-------------------- 321
                +T  +      PRD+Q+        ++ W                          
Sbjct: 96  GTRLTVTLTQHVQPPEPRDLQIST-DQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRL 154

Query: 322 -NGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTP 380
            +    A          T     L P++ Y   +  +   G   +  P     +    + 
Sbjct: 155 QDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQ 214

Query: 381 GFGEQAAKHHRRIGLVETYS---------LTGLYPNTLYYIWLAAQSPRGEGATTPPIPV 431
              E   ++                    +       L+Y            +      V
Sbjct: 215 PGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKP----------SPDAGSAV 264

Query: 432 RTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEG-------ATTPPIPVRTKQYEPGTA 484
             ++   +P   E     +T ++  +    P   G              +++       A
Sbjct: 265 LLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQ-MA 323

Query: 485 PRDVQVRPLSSSTMVIQWDEPETPNGQIT-GYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           P  +QV      +  ++W+  +     I   +++ Y +D +      +T+ + N     +
Sbjct: 324 PPSLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTA-TWKDSKTETLQNAHSMAL 381

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPL-----SAPVLVKTQ 576
             L P T Y  RV+  TS           S      T+
Sbjct: 382 PALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDTE 419

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A Length = 419

 Score = 65.8 bits (159), Expect = 2e-11
 Identities = 62/460 (13%), Positives = 120/460 (26%), Gaps = 89/460 (19%)

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           E     + ++     +S +  +W + +     +    +    ++ L          D   
Sbjct: 1   EETIPLQTLRCYNDYTSHITCRWADTQDAQR-LVNVTLIRRVNEDLLEPVSCDLSDDMPW 59

Query: 540 LTTISDLTPHTIYTIRVQAFTSVG--------PGPLSAPVLVKTQQGV-PSQPRDLRAVD 590
                         I  Q+F              PL   + V   Q V P +PRDL+ + 
Sbjct: 60  SACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQ-IS 118

Query: 591 IQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN 650
             +    L WS                                     L   +       
Sbjct: 119 TDQDHFLLTWSVA-----------------------------------LGSPQSHWLSPG 143

Query: 651 IISYELYW---NDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP- 706
            + +E+ +    D++  A          T     L P++ Y   +  +   G   +  P 
Sbjct: 144 DLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPS 203

Query: 707 ----IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRS 762
                     Q    A PQN+ C    +  +  SWE     +     V + L +  +  +
Sbjct: 204 KWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVR---KEVASSVSFGLFYKPSPDA 260

Query: 763 DSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG-------PSSYPITIRTHEDD 815
            S   +   +             T +   +        G       P      I++  + 
Sbjct: 261 GSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNI 320

Query: 816 PSEVCPTQNDFRKNK-------KTNGSNFKGG-------YLNDPMRFDVSD----GGALE 857
                P      K+        +T    ++         Y  D   +  S       A  
Sbjct: 321 QMA--PPSLQVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHS 378

Query: 858 LNVTGLQPDTIYTIQVAALTRKGDGDR-----SKPETIKT 892
           + +  L+P T Y  +V   T +   +      S+  +  T
Sbjct: 379 MALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A Length = 419

 Score = 43.4 bits (101), Expect = 2e-04
 Identities = 27/175 (15%), Positives = 54/175 (30%), Gaps = 13/175 (7%)

Query: 131 GSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKV 190
            S    + ++   +       +      VL     +    + C             IV V
Sbjct: 246 SSVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSV 305

Query: 191 QCKYA-----PLLTLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAAN 241
           Q + A       + + +AP  +++++    S  L W             + IQY+   A 
Sbjct: 306 QPRRAEKHIKSSVNIQMAPPSLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTAT 364

Query: 242 TPYSEISGIITTY-YTVRNLSPYTEYEFYIIAVNNLG--RGPPSSPAVITTGETE 293
              S+   +   +   +  L P T Y   +    +     G  S  +   + +TE
Sbjct: 365 WKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDTE 419

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 86.7 bits (215), Expect = 1e-20
 Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 3/100 (3%)

Query: 713 QYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK 772
                + P  +     + TS++ISW+      S  ++ YY++ + ETG            
Sbjct: 4   GSSVSSVPTKLEVVDATPTSLKISWDAYY--SSWQNVKYYRITYGETGGDSPVQEFTVPG 61

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGP-SSYPITIRT 811
             ++  +  LK   +Y I V A  +   G   + PI+I  
Sbjct: 62  YYSTATISGLKPGVDYTITVYAYDTFFPGYEPNSPISINY 101

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 85.6 bits (212), Expect = 3e-20
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 2/99 (2%)

Query: 478 QYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDN 537
                + P  ++V   + +++ I WD   +    +  Y++ Y +         E  V   
Sbjct: 4   GSSVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGG-DSPVQEFTVPGY 62

Query: 538 NQLTTISDLTPHTIYTIRVQAFTSVGPGPL-SAPVLVKT 575
               TIS L P   YTI V A+ +  PG   ++P+ +  
Sbjct: 63  YSTATISGLKPGVDYTITVYAYDTFFPGYEPNSPISINY 101

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 78.6 bits (194), Expect = 8e-18
 Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEIS-GIITTY 254
           ++   P  +++ + T TS+++ W     +   + YY I Y     ++P  E +     + 
Sbjct: 6   SVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYYST 65

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET 292
            T+  L P  +Y   + A +    G   +  +     T
Sbjct: 66  ATISGLKPGVDYTITVYAYDTFFPGYEPNSPISINYRT 103

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 58.6 bits (142), Expect = 9e-11
 Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK--AKHHRRIGLVETYSL 679
           + P  L  VD   T++ ++W     S +N+  Y + + +T      +     G   T ++
Sbjct: 9   SVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYYSTATI 68

Query: 680 TGLYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTK 712
           +GL P   Y I + A      G     PI +  +
Sbjct: 69  SGLKPGVDYTITVYAYDTFFPGYEPNSPISINYR 102

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 15/99 (15%)

Query: 291 ETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT--------------AKHHRRIGLV 336
            +   + P  ++V   + +++ I WD   +    +                +     G  
Sbjct: 4   GSSVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYY 63

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTK 374
            T +++GL P   Y I + A      G     PI +  +
Sbjct: 64  STATISGLKPGVDYTITVYAYDTFFPGYEPNSPISINYR 102

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 5/36 (13%), Positives = 16/36 (44%)

Query: 31 TEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITH 66
          +   + P  ++V   + +++ I WD   +    + +
Sbjct: 5  SSVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKY 40

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 85.9 bits (213), Expect = 3e-20
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSE---TLLYYVIQYKPKAANTPYSEISGII-TTY 254
            LP  P   ++++VT  SV L W   +        Y+I+   ++ +  +  ++  + TT 
Sbjct: 14  DLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTL 73

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGETEPGTA 297
           YTVR L P T Y F + A+N  G   PS     + T ++ P + 
Sbjct: 74  YTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPSSG 117

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASIVTLK 772
           +PG PP       ++  S+ +SW+P     + G      Y ++      S+S  ++    
Sbjct: 15  LPG-PPSKPQVTDVTKNSVTLSWQPG----TPGTLPASAYIIEAFSQSVSNSWQTVANHV 69

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDG-PSSYPITIRTHEDDPS 817
             T + +  L+  T Y   V A    G   PS     +RT +  PS
Sbjct: 70  KTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPS 115

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 54.7 bits (132), Expect = 3e-09
 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 6/101 (5%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-- 541
            P   QV  ++ +++ + W          + Y +   +  S  +S     V ++ + T  
Sbjct: 18  PPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYII---EAFSQSVSNSWQTVANHVKTTLY 74

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQGVPS 581
           T+  L P+TIY   V+A    G    S     V+TQ   PS
Sbjct: 75  TVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPS 115

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 3/96 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISY--ELYWNDTYAKAKHHRRIGLVETYSLTG 681
           P   +  D+ + +VTL+W   T       +Y  E +        +          Y++ G
Sbjct: 19  PSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRG 78

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYVP 716
           L PNT+Y   + A +P+G    +P   PVRT+   P
Sbjct: 79  LRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGP 114

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 86.1 bits (213), Expect = 3e-20
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 1/95 (1%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTV 257
           ++   P  +++   T TS+ + W  P+ T+ YY I Y     N+P  E +     +  T+
Sbjct: 27  SVSDVPTKLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATI 86

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET 292
             L P  +Y   + AV  L      S  +     T
Sbjct: 87  SGLKPGVDYTITVYAVTGLRLMLAGSKPISINYRT 121

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 71.5 bits (175), Expect = 5e-15
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 6/104 (5%)

Query: 708 PVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEAS 767
                Q      P  +     + TS+ ISW+ P        + YY++ + ETG +     
Sbjct: 20  ENLYFQGSVSDVPTKLEVVAATPTSLLISWDAPA-----VTVRYYRITYGETGGNSPVQE 74

Query: 768 IVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG-PSSYPITIR 810
                ++++  +  LK   +Y I V A T +      S PI+I 
Sbjct: 75  FTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAGSKPISIN 118

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 64.5 bits (157), Expect = 1e-12
 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 473 PVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWET 532
                Q      P  ++V   + ++++I WD P      +  Y++ Y +      S  + 
Sbjct: 20  ENLYFQGSVSDVPTKLEVVAATPTSLLISWDAP---AVTVRYYRITYGETGG--NSPVQE 74

Query: 533 QVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPG-PLSAPVLV 573
             V  ++ T TIS L P   YTI V A T +      S P+ +
Sbjct: 75  FTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAGSKPISI 117

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 50.7 bits (121), Expect = 9e-08
 Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 17/122 (13%)

Query: 265 EYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETP--- 321
            +  +     +      +        +      P  ++V   + ++++I WD P      
Sbjct: 4   HHHHHSSDYKDDDDKGEN-----LYFQGSVSDVPTKLEVVAATPTSLLISWDAPAVTVRY 58

Query: 322 --------NGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG-ATTPPIPVR 372
                    G    +     G   T +++GL P   Y I + A +      A + PI + 
Sbjct: 59  YRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAGSKPISIN 118

Query: 373 TK 374
            +
Sbjct: 119 YR 120

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 6/92 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
           P  L  V    T++ ++W  P      +  Y + + +T   +        G   T +++G
Sbjct: 32  PTKLEVVAATPTSLLISWDAPAV---TVRYYRITYGETGGNSPVQEFTVPGSKSTATISG 88

Query: 682 LYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTK 712
           L P   Y I + A +      A + PI +  +
Sbjct: 89  LKPGVDYTITVYAVTGLRLMLAGSKPISINYR 120

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 85.5 bits (212), Expect = 3e-20
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT-TYYTVRNLS 261
            P ++K++ +T T+  + W  P   +   ++ +  K   +  + +    + T  T+ NL 
Sbjct: 4   PPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLE 63

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVITTG 290
           P T YE  I+A N     PP S    T  
Sbjct: 64  PNTTYEIRIVARNGQQYSPPVSTTFTTGS 92

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 67.4 bits (165), Expect = 6e-14
 Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 6/93 (6%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
           PP N+    ++ T+  ++W+PP +      I    + F        E ++    + TS  
Sbjct: 4   PPFNIKVTNITLTTAVVTWQPPILP-----IEGILVTFGRKNDPSDETTVDLTSSITSLT 58

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           L  L+  T Y I ++A       P     T  T
Sbjct: 59  LTNLEPNTTYEIRIVARNGQQYSPPVST-TFTT 90

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 64.3 bits (157), Expect = 8e-13
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P +++V  ++ +T V+ W  P  P   I G  V + +                  LT +
Sbjct: 4   PPFNIKVTNITLTTAVVTWQPPILP---IEGILVTFGRKNDPSDETTVDLTSSITSLT-L 59

Query: 544 SDLTPHTIYTIRVQAFTSVGPGP 566
           ++L P+T Y IR+ A       P
Sbjct: 60  TNLEPNTTYEIRIVARNGQQYSP 82

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 50.5 bits (121), Expect = 7e-08
 Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 11/99 (11%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
           P +++  +I  T   + W  P      I    + +      +          + + +LT 
Sbjct: 5   PFNIKVTNITLTTAVVTWQPPI---LPIEGILVTFGRKNDPSDETTVDLTSSITSLTLTN 61

Query: 682 LYPNTLYYIWLAAQSPRGEG------ATTPPIPVRTKQY 714
           L PNT Y I + A++ +          TT  +      +
Sbjct: 62  LEPNTTYEIRIVARNGQQYSPPVSTTFTTGSLEHHHHHH 100

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 17/97 (17%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETP-----------NGQITAKHHRRIGLVETYSLTGLY 345
            P +++V  ++ +T V+ W  P  P           N             + + +LT L 
Sbjct: 4   PPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLE 63

Query: 346 PNTLYYIWLAAQSPRGEG------ATTPPIPVRTKQY 376
           PNT Y I + A++ +          TT  +      +
Sbjct: 64  PNTTYEIRIVARNGQQYSPPVSTTFTTGSLEHHHHHH 100

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 2/50 (4%)

Query: 852 DGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPH 901
                 L +T L+P+T Y I++ A   +         T  T G + +  H
Sbjct: 51  TSSITSLTLTNLEPNTTYEIRIVARNGQQYSPPV--STTFTTGSLEHHHH 98

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 124

 Score = 86.2 bits (214), Expect = 3e-20
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 14/128 (10%)

Query: 180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE---TLLYYVIQYK 236
           G   +S  +            P  P ++ IS +   SV L +    +   ++  ++++ +
Sbjct: 1   GSSGSSGTISSGVPPEL----PGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQ 56

Query: 237 PKAAN-----TPYSEISGII-TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITT 289
                         ++S         V +L+P+T Y F +  VN +G  PPS P   I T
Sbjct: 57  VGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 116

Query: 290 GETEPGTA 297
            ++ P + 
Sbjct: 117 LQSGPSSG 124

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 124

 Score = 74.7 bits (184), Expect = 3e-16
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 6/123 (4%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++  I        PG  P ++ +  +   ++ +Q+         I+ + V      
Sbjct: 1   GSSGSSGTISSGVPPELPG-PPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGV 59

Query: 524 SLPMSAW----ETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQG 578
                 W    +     + +   + DL P T Y+ R++    VG  P S P   ++T Q 
Sbjct: 60  VGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQS 119

Query: 579 VPS 581
            PS
Sbjct: 120 GPS 122

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 124

 Score = 65.1 bits (159), Expect = 9e-13
 Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 13/127 (10%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQF 756
           G   ++  I       +PG PP N+    +   S+ + + P      +G   I  + ++ 
Sbjct: 1   GSSGSSGTISSGVPPELPG-PPTNLGISNIGPRSVTLQFRPG----YDGKTSISRWLVEA 55

Query: 757 VETGRSDSE-----ASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP-ITIR 810
                 + E       +    +  S  + +L  +T Y   +     +G  P S P   I+
Sbjct: 56  QVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQ 115

Query: 811 THEDDPS 817
           T +  PS
Sbjct: 116 TLQSGPS 122

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 124

 Score = 48.5 bits (116), Expect = 5e-07
 Identities = 19/160 (11%), Positives = 41/160 (25%), Gaps = 41/160 (25%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S  +       +P  P +L   +I   +VTL +        +I  +         
Sbjct: 1   GSSGSSGTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRW--------- 51

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW---NDTYAKAKHHRRIGLVETYSL 679
                                       ++  ++      + +             +  +
Sbjct: 52  ----------------------------LVEAQVGVVGEGEEWLLIHQLSNEPDARSMEV 83

Query: 680 TGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYVPGA 718
             L P T Y   +   +  G    + P   ++T Q  P +
Sbjct: 84  PDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPSS 123

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 84.4 bits (209), Expect = 6e-20
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTVRNLS 261
           AP D++++ VT TS+ + WT PS T+  Y I Y P        E++    +T  T+  L+
Sbjct: 4   APTDLQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLT 63

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
           P  EY   + A+ +    PP      T G    
Sbjct: 64  PGVEYVVSVYALKDNQESPPLVGTQTTGGHHHH 96

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 64.0 bits (156), Expect = 1e-12
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-T 542
           AP D+QV  ++ +++ + W  P   +  ITGY++ YT          +   V  +  + T
Sbjct: 4   APTDLQVTNVTDTSITVSWTPP---SATITGYRITYTPSNG--PGEPKELTVPPSSTSVT 58

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGP 566
           I+ LTP   Y + V A       P
Sbjct: 59  ITGLTPGVEYVVSVYALKDNQESP 82

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 62.1 bits (151), Expect = 4e-12
 Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 6/93 (6%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P ++    ++ TSI +SW PP     +  I  Y++ +  +        +    + TS  
Sbjct: 4   APTDLQVTNVTDTSITVSWTPP-----SATITGYRITYTPSNGPGEPKELTVPPSSTSVT 58

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           +  L    EY + V A     + P     T  T
Sbjct: 59  ITGLTPGVEYVVSVYALKDNQESPPLV-GTQTT 90

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 45.1 bits (107), Expect = 4e-06
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
           P DL+  ++ +T++T++W+ P+     I  Y + +  +    +           + ++TG
Sbjct: 5   PTDLQVTNVTDTSITVSWTPPS---ATITGYRITYTPSNGPGEPKELTVPPSSTSVTITG 61

Query: 682 LYPNTLYYIWLAAQSPRGEG 701
           L P   Y + + A     E 
Sbjct: 62  LTPGVEYVVSVYALKDNQES 81

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 11/78 (14%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETP-----------NGQITAKHHRRIGLVETYSLTGLY 345
           AP D+QV  ++ +++ + W  P              NG    K         + ++TGL 
Sbjct: 4   APTDLQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLT 63

Query: 346 PNTLYYIWLAAQSPRGEG 363
           P   Y + + A     E 
Sbjct: 64  PGVEYVVSVYALKDNQES 81

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 84.4 bits (209), Expect = 9e-20
 Identities = 16/98 (16%), Positives = 29/98 (29%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNL 260
              P  +  S+V+  + R+ W      +    + Y            +    T   +  L
Sbjct: 8   LAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPL 67

Query: 261 SPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAP 298
           S  T Y   +  +   G     +  V T     P + P
Sbjct: 68  SSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAPSPSSGP 105

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 67.8 bits (166), Expect = 5e-14
 Identities = 22/127 (17%), Positives = 38/127 (29%), Gaps = 23/127 (18%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++   P           PR +    +S     + W+        +   +V Y   +
Sbjct: 1   GSSGSSGLAP-----------PRHLGFSDVSHDAARVFWEGA---PRPVRLVRVTYVSSE 46

Query: 524 SLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPG-PLSAPVLVKTQQGVPS 581
                         N  +  +  L+  T YT+RV      G    L+  V   T +  PS
Sbjct: 47  G---GHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRV---TTKKAPS 100

Query: 582 QPRDLRA 588
            P    +
Sbjct: 101 -PSSGPS 106

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 64.7 bits (158), Expect = 6e-13
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 17/119 (14%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++             APP+++    +S  + R+ WE  P       +   ++ +V 
Sbjct: 1   GSSGSSGL-----------APPRHLGFSDVSHDAARVFWEGAP-----RPVRLVRVTYVS 44

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
           +    S  +     N TS +L  L   T Y + V      G   +            PS
Sbjct: 45  SEGGHSGQTEAP-GNATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAPSPS 102

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 16/92 (17%), Positives = 26/92 (28%), Gaps = 10/92 (10%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI-GLVETYSLTGL 682
           PR L   D+   A  + W         +    + +  +           G   +  L  L
Sbjct: 11  PRHLGFSDVSHDAARVFWEGAP---RPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPL 67

Query: 683 YPNTLYYIWLAAQSPRGEG------ATTPPIP 708
             +T Y + +    P G         TT   P
Sbjct: 68  SSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAP 99

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 14/98 (14%), Positives = 26/98 (26%), Gaps = 16/98 (16%)

Query: 289 TGETEPGTAPRDVQVRPLSSSTMVIQWDEPE----------TPNGQITAKHHRRIGLVET 338
           +  +     PR +    +S     + W+               +    +      G   +
Sbjct: 2   SSGSSGLAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAPGNATS 61

Query: 339 YSLTGLYPNTLYYIWLAAQSPRGEG------ATTPPIP 370
             L  L  +T Y + +    P G         TT   P
Sbjct: 62  AMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAP 99

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 83.6 bits (207), Expect = 1e-19
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 1/95 (1%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTV 257
           ++   P  +++   T TS+ + W   S ++ YY I Y     N+P  E +    ++  T+
Sbjct: 3   SVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATI 62

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET 292
             LSP  +Y   + A  +      S         T
Sbjct: 63  SGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYRT 97

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 82.8 bits (205), Expect = 2e-19
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF 777
           + P  +     + TS+ ISW+          + YY++ + ETG +          + ++ 
Sbjct: 6   SVPTKLEVVAATPTSLLISWDASS-----SSVSYYRITYGETGGNSPVQEFTVPGSSSTA 60

Query: 778 VLDELKKWTEYRIWVLAGTSIGDGP-SSYPITIRT 811
            +  L    +Y I V A  S  D   S  P +I  
Sbjct: 61  TISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINY 95

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 71.3 bits (175), Expect = 3e-15
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-T 542
            P  ++V   + ++++I WD        ++ Y++ Y +      S  +   V  +  T T
Sbjct: 7   VPTKLEVVAATPTSLLISWDASS---SSVSYYRITYGETGG--NSPVQEFTVPGSSSTAT 61

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPL-SAPVLV 573
           IS L+P   YTI V A+ S        +P  +
Sbjct: 62  ISGLSPGVDYTITVYAYYSYYDLYYSYSPSSI 93

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
           P  L  V    T++ ++W   +    ++  Y + + +T   +        G   T +++G
Sbjct: 8   PTKLEVVAATPTSLLISWDASS---SSVSYYRITYGETGGNSPVQEFTVPGSSSTATISG 64

Query: 682 LYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTK 712
           L P   Y I + A     +   +  P  +  +
Sbjct: 65  LSPGVDYTITVYAYYSYYDLYYSYSPSSINYR 96

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 13/97 (13%)

Query: 290 GETEPGTAPRDVQVRPLSSSTMVIQWDEPETP-----------NGQITAKHHRRIGLVET 338
           G +     P  ++V   + ++++I WD   +             G    +     G   T
Sbjct: 1   GSSVSS-VPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSST 59

Query: 339 YSLTGLYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTK 374
            +++GL P   Y I + A     +   +  P  +  +
Sbjct: 60  ATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYR 96

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 83.6 bits (207), Expect = 2e-19
 Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 4/96 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLT- 541
           +P   QV P  SST  +Q+DEPE   G  I  YK  +         +      + +    
Sbjct: 9   SPSIDQVEP-YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGI 67

Query: 542 -TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
            TI  L P T Y +R+ A    G G +SA    KTQ
Sbjct: 68  VTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 103

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 71.7 bits (176), Expect = 2e-15
 Identities = 19/100 (19%), Positives = 39/100 (39%), Gaps = 9/100 (9%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANT----PYSEISG 249
           +  P +P   ++ E  +++ ++ +  P  T    +L Y  +++           Y     
Sbjct: 4   MDTPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEA 62

Query: 250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
            +    T+  L P T Y   + A+N  G G  S+ +   T
Sbjct: 63  SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 102

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 62.0 bits (151), Expect = 7e-12
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 10/106 (9%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASI 768
           +    P   P     EP  S++ ++ ++ P    + G   I+ YK ++   G     +  
Sbjct: 2   SHMDTPS-SPSIDQVEP-YSSTAQVQFDEPE---ATGGVPILKYKAEWRAVGEEVWHSKW 56

Query: 769 VTLK---NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
              K    +    +  LK  T Y + + A    G G  S     +T
Sbjct: 57  YDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 102

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 45.1 bits (107), Expect = 6e-06
 Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 6/93 (6%)

Query: 626 DLRAVDIQETAVTLAWSKPTHSG-ENIISYELYW-----NDTYAKAKHHRRIGLVETYSL 679
            +  V+   +   + + +P  +G   I+ Y+  W        ++K    +   +    ++
Sbjct: 11  SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTI 70

Query: 680 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
            GL P T Y + LAA + +G G  +     +T+
Sbjct: 71  VGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 103

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 44.7 bits (106), Expect = 7e-06
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 19/96 (19%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNG-QIT-----------------AKHHRRIGLVET 338
           +P   QV P  SST  +Q+DEPE   G  I                      +   +   
Sbjct: 9   SPSIDQVEP-YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGI 67

Query: 339 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
            ++ GL P T Y + LAA + +G G  +     +T+
Sbjct: 68  VTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 103

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 42.0 bits (99), Expect = 7e-05
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 860 VTGLQPDTIYTIQVAALTRKGDGDRSKPETIKT 892
           + GL+P+T Y +++AAL  KG G+ S     KT
Sbjct: 70  IVGLKPETTYAVRLAALNGKGLGEISAASEFKT 102

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 121

 Score = 83.9 bits (208), Expect = 2e-19
 Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 16/126 (12%)

Query: 180 GVIETSTIVKVQCKYAPLLTLPVAP--LDVKISEVTATSVRLDWTYPSE---TLLYYVIQ 234
           G    S  ++V+        LP AP      +S V   ++ L WT P +    L+ Y+++
Sbjct: 4   GSSGRSAHLRVR-------QLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILE 56

Query: 235 YKPKAAN--TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGE 291
                A      + +    T+  TV+ L P   Y+F + AVN++G+G  S     ++  E
Sbjct: 57  MSENNAPWTVLLASVDPKATSV-TVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 115

Query: 292 TEPGTA 297
           + P + 
Sbjct: 116 SGPSSG 121

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 121

 Score = 62.0 bits (151), Expect = 9e-12
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 14/124 (11%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPL--SSSTMVIQWDEPETPNGQITGYKVYYTQ 521
           G    +  + VR     P  AP              + + W +P   N  +  Y +  ++
Sbjct: 4   GSSGRSAHLRVRQL---PH-APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSE 59

Query: 522 DQSLPMSAWETQV--VDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQ 577
           + +     W   +  VD    + T+  L P   Y  R+ A   VG G  S     V   +
Sbjct: 60  NNA----PWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 115

Query: 578 GVPS 581
             PS
Sbjct: 116 SGPS 119

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 121

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 11/123 (8%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQ-NVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQ 755
           G    +  + VR    +P AP     +   +   +I ++W  P     +G+  ++ Y L+
Sbjct: 4   GSSGRSAHLRVRQ---LPHAPEHPVATLSTVERRAINLTWTKP----FDGNSPLIRYILE 56

Query: 756 FVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPIT-IRTHED 814
             E     +          TS  +  L     Y+  + A   +G G  S     +   E 
Sbjct: 57  MSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116

Query: 815 DPS 817
            PS
Sbjct: 117 GPS 119

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 121

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK--AKHHRRIGLVETYSLTGLYP 684
                ++  A+ L W+KP      +I Y L  ++  A              + ++ GL P
Sbjct: 26  ATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVP 85

Query: 685 NTLYYIWLAAQSPRGEGATTPPI-PVRTKQYVPGA 718
              Y   L A +  G+G  +     V   +  P +
Sbjct: 86  ARSYQFRLCAVNDVGKGQFSKDTERVSLPESGPSS 120

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 88.3 bits (219), Expect = 3e-19
 Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 2/92 (2%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           V+ V P+FSI P +  E+M    +N++CVAVGSPMP+VKW +G   +LTP+D +PVGRNV
Sbjct: 201 VQNVAPRFSILPMSH-EIMPGGNVNITCVAVGSPMPYVKWMQG-AEDLTPEDDMPVGRNV 258

Query: 160 LTLDRVTESENYTCIAASVLGVIETSTIVKVQ 191
           L L  V +S NYTC+A S LGVIE    + V+
Sbjct: 259 LELTDVKDSANYTCVAMSSLGVIEAVAQITVK 290

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 59.8 bits (145), Expect = 1e-09
 Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 11/119 (9%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRN--- 158
            PP+F   P      +     +  C A G P P V W K G+ +     + +    +   
Sbjct: 5   EPPRFIKEPKDQ-IGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGA 63

Query: 159 VLTLDRVTESE---NYTCIAASVLGVIETSTIVKVQCKYAPLLTLP---VAPLDVKISE 211
           VL +  +        Y C+A + +G I     + V  +       P   + P    +  
Sbjct: 64  VLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVER 122

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens} Length = 304

 Score = 59.5 bits (144), Expect = 1e-09
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 12/125 (9%)

Query: 95  QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDK- 152
              D +    P   + P  L  V       + C A G+P P + W K    ++ +  +  
Sbjct: 99  LREDQLPSGFPNIDMGP-QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGR 157

Query: 153 -LPVGRNVLTLDRVTESE--NYTCIAASVLGVIETST---IVKVQCKYAPLLTLPVAPLD 206
              +    L ++   E++   Y C+A +  GV  +S     V+VQ   AP  ++   P+ 
Sbjct: 158 IKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQ-NVAPRFSIL--PMS 214

Query: 207 VKISE 211
            +I  
Sbjct: 215 HEIMP 219

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303

 Score = 88.3 bits (218), Expect = 4e-19
 Identities = 50/338 (14%), Positives = 98/338 (28%), Gaps = 54/338 (15%)

Query: 485 PRDVQVRPLSSSTMVIQWDEPETPNGQITGYK-VYYTQDQSLPMSAWETQVVDNNQLTTI 543
           P    V+  S+ T V    E       +     V+ T   ++P   +       + +T  
Sbjct: 11  PESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFT 70

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKP 603
              + +   T  +  F  +        ++       P +P++L  +  +   +   W   
Sbjct: 71  DIASLNIQLTCNILTFGQLEQNVYGITIIS---GLPPEKPKNLSCIVNEGKKMRCEWDGG 127

Query: 604 THSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 663
             +     ++ L       K  D                                     
Sbjct: 128 RETHL-ETNFTLKSEWATHKFAD------------------------------------- 149

Query: 664 KAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNV 723
                +R                   +W+ A++  G+  T+  I       V   PP N+
Sbjct: 150 --CKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGK-VTSDHINFDPVYKVKPNPPHNL 206

Query: 724 SCEPLSST--SIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV--TLKNQTSFVL 779
           S          ++++W  P     +  I+ Y +Q+     S         T   ++SF +
Sbjct: 207 SVINSEELSSILKLTWTNPS--IKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTV 264

Query: 780 DELKKWTEYRIWVLAGTSIGDGPSSY---PITIRTHED 814
            +LK +TEY   +      G G  S      +  T+ED
Sbjct: 265 QDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 302

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303

 Score = 86.0 bits (212), Expect = 2e-18
 Identities = 43/300 (14%), Positives = 92/300 (30%), Gaps = 45/300 (15%)

Query: 95  QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCV-------AVGSPMPFVKWRKGQNIEL 147
           ++ DP   + P+  +       V L S     CV              ++ W+   +  +
Sbjct: 1   ELLDPCGYISPESPV-------VQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTN-HFTI 52

Query: 148 TPDDKLPVGRNVLTL---DRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP 204
             +    + R   ++   D  + +   TC   +   + +    + +          P  P
Sbjct: 53  PKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGL-----PPEKP 107

Query: 205 LDVKISEVTATSVRLDWTYPSETLLY--YVIQYK-PKAANTPYSEISGIITTYYTVRNLS 261
            ++         +R +W    ET L   + ++ +                T+     +  
Sbjct: 108 KNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTV 167

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLS--SSTMVIQWDEPE 319
            +   E ++ A N LG+            + +P   P ++ V      SS + + W  P 
Sbjct: 168 YFVNIEVWVEAENALGKVTSDHINFDPVYKVKPN-PPHNLSVINSEELSSILKLTWTNPS 226

Query: 320 TPNGQIT----------AKHHRRIGLVET------YSLTGLYPNTLYYIWLAAQSPRGEG 363
             +  I           A    +I   +T      +++  L P T Y   +      G+G
Sbjct: 227 IKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKG 286

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303

 Score = 70.6 bits (172), Expect = 3e-13
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 4/127 (3%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS--SSTMVIQWDE 504
                   +W+ A++  G+  T+  I            P ++ V      SS + + W  
Sbjct: 166 TVYFVNIEVWVEAENALGK-VTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTN 224

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVG 563
           P   +  I  Y + Y    +   S    +   + + + T+ DL P T Y  R++     G
Sbjct: 225 PSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDG 284

Query: 564 PGPLSAP 570
            G  S  
Sbjct: 285 KGYWSDW 291

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303

 Score = 64.8 bits (157), Expect = 2e-11
 Identities = 34/287 (11%), Positives = 70/287 (24%), Gaps = 44/287 (15%)

Query: 638 TLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTG--LYPNTLYYIWLAAQ 695
            L      +   N        N      + +  I    +          N      +   
Sbjct: 27  VLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTF 86

Query: 696 SPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQ 755
               +      I        P   P+N+SC       +R  W+     R       + L+
Sbjct: 87  GQLEQNVYGITIIS---GLPPE-KPKNLSCIVNEGKKMRCEWDGG---RETHLETNFTLK 139

Query: 756 FVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPI---TIRTH 812
                   ++         +  V      +    +WV A  ++G   S +       +  
Sbjct: 140 SEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVK 199

Query: 813 EDDPSEVCPTQNDFRKN-----------------------KKTNGSNFKGGYLNDPMRFD 849
            + P  +    ++   +                       +  + S +      D     
Sbjct: 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPED----- 254

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDG---DRSKPETIKTP 893
            +        V  L+P T Y  ++  +   G G   D S+  +  T 
Sbjct: 255 -TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY 300

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303

 Score = 61.8 bits (149), Expect = 3e-10
 Identities = 28/255 (10%), Positives = 63/255 (24%), Gaps = 45/255 (17%)

Query: 449 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETP 508
            N      +       +      I        P   P+++         M  +WD     
Sbjct: 75  LNIQLTCNILTFGQLEQNVYGITIISGL----PPEKPKNLSCIVNEGKKMRCEWDGGRET 130

Query: 509 NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLS 568
           +   T + +          +  + +       T            + V+A  ++G     
Sbjct: 131 HL-ETNFTLKSEWATH-KFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSD 188

Query: 569 APVLVKTQQGVPSQPRDLRA--VDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRD 626
                   +  P+ P +L     +   + + L W+ P+     I+ Y +           
Sbjct: 189 HINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQ---------- 238

Query: 627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNT 686
                                      Y      T+++           ++++  L P T
Sbjct: 239 ---------------------------YRTKDASTWSQIPPEDTASTRSSFTVQDLKPFT 271

Query: 687 LYYIWLAAQSPRGEG 701
            Y   +      G+G
Sbjct: 272 EYVFRIRCMKEDGKG 286

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303

 Score = 55.2 bits (132), Expect = 3e-08
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 9/100 (9%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAA---NTPYSEISGIITTY 254
           P   L V  SE  ++ ++L WT PS     +L Y IQY+ K A   +    E +    + 
Sbjct: 202 PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSS 261

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGP---PSSPAVITTGE 291
           +TV++L P+TEY F I  +   G+G     S  A   T E
Sbjct: 262 FTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 82.1 bits (203), Expect = 5e-19
 Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 1/97 (1%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTV 257
           +    P ++ ++  T  S+++ WT P   +L+Y + Y P +   P   +S     ++ T+
Sbjct: 6   SGRSPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEKSVSVPGARSHVTL 65

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
            +L   T+Y   + A+   GR    S    T   + P
Sbjct: 66  PDLQAATKYRVLVSAIYAAGRSEAVSATGQTACPSGP 102

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 76.7 bits (189), Expect = 5e-17
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 16/119 (13%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++             +PP N++    +  S+++SW PP      G +++Y L +  
Sbjct: 1   GSSGSSGR-----------SPPSNLALASETPDSLQVSWTPP-----LGRVLHYWLTYAP 44

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
                 E S+     ++   L +L+  T+YR+ V A  + G   +            PS
Sbjct: 45  ASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAIYAAGRSEAVSATGQTACPSGPS 103

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 73.2 bits (180), Expect = 6e-16
 Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 20/123 (16%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++             + P ++ +   +  ++ + W  P    G++  Y + Y    
Sbjct: 1   GSSGSSGR-----------SPPSNLALASETPDSLQVSWTPP---LGRVLHYWLTYAPAS 46

Query: 524 SLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ 582
            L     ++  V   +   T+ DL   T Y + V A  + G       V    Q   PS 
Sbjct: 47  GLGPE--KSVSVPGARSHVTLPDLQAATKYRVLVSAIYAAGRSE---AVSATGQTACPSG 101

Query: 583 PRD 585
           P  
Sbjct: 102 PSS 104

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 15/99 (15%), Positives = 30/99 (30%), Gaps = 8/99 (8%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
           P +L        ++ ++W+ P      ++ Y L +               G     +L  
Sbjct: 11  PSNLALASETPDSLQVSWTPPL---GRVLHYWLTYAPASGLGPEKSVSVPGARSHVTLPD 67

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
           L   T Y + ++A    G       +    +   P  P 
Sbjct: 68  LQAATKYRVLVSAIYAAGRS---EAVSATGQTACPSGPS 103

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 18/98 (18%)

Query: 289 TGETEPGTAPRDVQVRPLSSSTMVIQWDEPETP-----------NGQITAKHHRRIGLVE 337
           +  +   + P ++ +   +  ++ + W  P              +G    K     G   
Sbjct: 2   SSGSSGRSPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEKSVSVPGARS 61

Query: 338 TYSLTGLYPNTLYYIWLAAQSPRGEG-------ATTPP 368
             +L  L   T Y + ++A    G          T  P
Sbjct: 62  HVTLPDLQAATKYRVLVSAIYAAGRSEAVSATGQTACP 99

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 86.8 bits (214), Expect = 1e-18
 Identities = 38/291 (13%), Positives = 76/291 (26%), Gaps = 41/291 (14%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRNVL 160
           R  P   +    +L  +    + L+C  V       V W   +    +   +       L
Sbjct: 4   RRCPAQEVAR-GVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRL 62

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVR 218
            L  V   +  NY+C  A   G    +  + V          P  P      +   ++V 
Sbjct: 63  LLRSVQLHDSGNYSCYRA---GRPAGTVHLLVD-------VPPEEPQLSCFRKSPLSNVV 112

Query: 219 LDWTYPSETLLY--YVIQYKPKAANTPYSEI-------SGIITTYYTVRNLSPYTEYEFY 269
            +W   S   L    V+  +    +                  +          + Y   
Sbjct: 113 CEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVS 172

Query: 270 IIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPL--SSSTMVIQWDEPET------- 320
           +   +++G    S               P ++ V  +  +   + + W +P +       
Sbjct: 173 MCVASSVGSK-FSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYR 231

Query: 321 --------PNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG 363
                        T        L     +   +    + + L AQ   G+G
Sbjct: 232 LRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQG 282

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 80.3 bits (197), Expect = 2e-16
 Identities = 26/227 (11%), Positives = 65/227 (28%), Gaps = 16/227 (7%)

Query: 604 THSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY------ 657
             +G    +  L  +    +P+         + V   W  P  +        L       
Sbjct: 78  YRAGRPAGTVHLLVDVPPEEPQLSCFRKSPLSNVVCEW-GPRSTPSLTTKAVLLVRKFQN 136

Query: 658 --WNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYV 715
               D     ++ +               ++ Y + +   S  G    +     +    +
Sbjct: 137 SPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVG-SKFSKTQTFQGCGIL 195

Query: 716 PGAPPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKN 773
              PP N++   +  +   + ++W+ P    S+ + + ++L++           +V    
Sbjct: 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVK-DL 254

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSS---YPITIRTHEDDPS 817
           Q   V+ +      + + + A    G G  S            +  S
Sbjct: 255 QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPWTESRS 301

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 69.9 bits (170), Expect = 7e-13
 Identities = 25/219 (11%), Positives = 65/219 (29%), Gaps = 20/219 (9%)

Query: 397 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIW 456
              S   L    +  +     SP  +          ++++             ++ Y + 
Sbjct: 116 GPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFS---CQLAVPEGDSSFYIVS 172

Query: 457 LAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPL--SSSTMVIQWDEPET--PNGQI 512
           +   S  G    +     +         P ++ V  +  +   + + W +P +   +   
Sbjct: 173 MCVASSVG-SKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYR 231

Query: 513 TGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSA-- 569
             +++ Y  ++S     + T +V + Q    I D      + ++++A    G G  S   
Sbjct: 232 LRFELRYRAERS---KTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWS 288

Query: 570 -PVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSG 607
              +        S P      + + +    A +      
Sbjct: 289 PEAMGTPWTESRSPP-----AENEVSTPMQALTTNKDDD 322

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 67.6 bits (164), Expect = 4e-12
 Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 11/161 (6%)

Query: 166 TESENYT--CIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY 223
            +S  Y      AS +G   + T     C        P A + V         + + W  
Sbjct: 164 GDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQ--PDPPANITVTAVARNPRWLSVTWQD 221

Query: 224 PSET-----LLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278
           P         L + ++Y+ + + T  + +   +  +  + +      +   + A    G+
Sbjct: 222 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ 281

Query: 279 GPPS--SPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDE 317
           G  S  SP  + T  TE  + P + +V     +    + D+
Sbjct: 282 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDD 322

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 56.8 bits (136), Expect = 1e-08
 Identities = 34/266 (12%), Positives = 69/266 (25%), Gaps = 55/266 (20%)

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDN-- 537
            P   P+    R    S +V +W  P +     T   +   + Q+ P   ++     +  
Sbjct: 93  VPPEEPQLSCFRKSPLSNVVCEW-GPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQE 151

Query: 538 ---NQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQET 594
                          + Y + +   +SVG    S     +    +   P           
Sbjct: 152 SQKFSCQLAVPEGDSSFYIVSMCVASSVGSKF-SKTQTFQGCGILQPDP----------- 199

Query: 595 AVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRA--VDIQETAVTLAWSKPT--HSGEN 650
                                        P ++    V      +++ W  P   +S   
Sbjct: 200 -----------------------------PANITVTAVARNPRWLSVTWQDPHSWNSSFY 230

Query: 651 IISYEL-YWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG---ATTPP 706
            + +EL Y  +            L     +   +    + + L AQ   G+G     +P 
Sbjct: 231 RLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPE 290

Query: 707 IPVRTKQYVPGAPPQNVSCEPLSSTS 732
                       P +N    P+ + +
Sbjct: 291 AMGTPWTESRSPPAENEVSTPMQALT 316

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 42.2 bits (98), Expect = 6e-04
 Identities = 21/214 (9%), Positives = 47/214 (21%), Gaps = 31/214 (14%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH-IVYYKLQFVETGRSDSE--ASIVTL 771
           VP   PQ         +++   W P          ++  +           E        
Sbjct: 93  VPPEEPQLSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQES 152

Query: 772 KNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKK 831
           +  +  +       + Y + +   +S+G    S   T +       +  P  N       
Sbjct: 153 QKFSCQLAVPEGDSSFYIVSMCVASSVGSK-FSKTQTFQGCGILQPD--PPANITVTAVA 209

Query: 832 TNGSN----------FKGGYL------------NDPMRFDVSDGGALELNVTGLQPDTIY 869
            N             +   +             +      +         +        +
Sbjct: 210 RNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRH 269

Query: 870 TIQVAALTRKGDG---DRSKPETIKTPGGVPNRP 900
            +Q+ A    G G   + S            + P
Sbjct: 270 VVQLRAQEEFGQGEWSEWSPEAMGTPWTESRSPP 303

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 80.8 bits (200), Expect = 1e-18
 Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 5/100 (5%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P      +++  +AT  +++W  P      +  Y +++                   Y +
Sbjct: 8   PDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGG--VEGSMQICYCGPGLSYEI 65

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
           + LSP T Y   + A++ +G GP S      T  +   ++
Sbjct: 66  KGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSSGPSS 105

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 79.7 bits (197), Expect = 4e-18
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 4/97 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
             +  QV   S++   + W+ P +    +T Y++ +   +     + +           I
Sbjct: 10  QCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEG----SMQICYCGPGLSYEI 65

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
             L+P T Y  RVQA + VG GP S  V   T     
Sbjct: 66  KGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSSG 102

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 68.9 bits (169), Expect = 2e-14
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 4/97 (4%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
            +  +      T   + W  P  +G ++  Y L W             G   +Y + GL 
Sbjct: 11  CKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGS-MQICYCGPGLSYEIKGLS 69

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
           P T YY  + A S  G G  +  +   T    P + P
Sbjct: 70  PATTYYCRVQALSVVGAGPFSEVVACVTP---PSSGP 103

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 68.1 bits (167), Expect = 4e-14
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 6/106 (5%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT 770
           +    P    +       S+T  +++WE P    +   +  Y+L++   G  +    I  
Sbjct: 3   SGSSGPDQC-KPPQVTCRSATCAQVNWEVPL--SNGTDVTEYRLEW---GGVEGSMQICY 56

Query: 771 LKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
                S+ +  L   T Y   V A + +G GP S  +   T     
Sbjct: 57  CGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSSG 102

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 12/98 (12%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT-----------AKHHRRIGLV 336
           ++G + P    +  QV   S++   + W+ P +    +T           +      G  
Sbjct: 2   SSGSSGPD-QCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGPG 60

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
            +Y + GL P T YY  + A S  G G  +  +   T 
Sbjct: 61  LSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTP 98

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 15/48 (31%), Positives = 19/48 (39%)

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
              G  L   + GL P T Y  +V AL+  G G  S+     TP    
Sbjct: 55  CYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSSG 102

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 80.6 bits (199), Expect = 2e-18
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 1/93 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTVRNLS 261
           AP ++ +SEVT  S+RL WT P      ++IQY+          ++       Y +  L 
Sbjct: 4   APKNLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLK 63

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
           P TEY   I  V    R  P S    T G    
Sbjct: 64  PGTEYTVSIYGVKGGHRSNPLSAEFTTGGHHHH 96

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 55.9 bits (135), Expect = 6e-10
 Identities = 12/84 (14%), Positives = 33/84 (39%), Gaps = 6/84 (7%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-T 542
           AP+++ V  ++  ++ + W  P   +     + + Y + + +         V  ++ +  
Sbjct: 4   APKNLVVSEVTEDSLRLSWTAP---DAAFDSFMIQYQESEKV--GEAINLTVPGSERSYD 58

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGP 566
           ++ L P T YT+ +          
Sbjct: 59  LTGLKPGTEYTVSIYGVKGGHRSN 82

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 55.9 bits (135), Expect = 7e-10
 Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 6/93 (6%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P+N+    ++  S+R+SW  P     +     + +Q+ E+ +     ++    ++ S+ 
Sbjct: 4   APKNLVVSEVTEDSLRLSWTAP-----DAAFDSFMIQYQESEKVGEAINLTVPGSERSYD 58

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           L  LK  TEY + +                  T
Sbjct: 59  LTGLKPGTEYTVSIYGVKGGHRSNPLS-AEFTT 90

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 11/93 (11%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
           P++L   ++ E ++ L+W+ P        S+ + + ++    +       G   +Y LTG
Sbjct: 5   PKNLVVSEVTEDSLRLSWTAPD---AAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTG 61

Query: 682 LYPNTLYYIWLAAQSPRGEG------ATTPPIP 708
           L P T Y + +                TT    
Sbjct: 62  LKPGTEYTVSIYGVKGGHRSNPLSAEFTTGGHH 94

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 38.6 bits (90), Expect = 9e-04
 Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 17/91 (18%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETP-----------NGQITAKHHRRIGLVETYSLTGLY 345
           AP+++ V  ++  ++ + W  P+                  A +    G   +Y LTGL 
Sbjct: 4   APKNLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLK 63

Query: 346 PNTLYYIWLAAQSPRGEG------ATTPPIP 370
           P T Y + +                TT    
Sbjct: 64  PGTEYTVSIYGVKGGHRSNPLSAEFTTGGHH 94

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 80.5 bits (199), Expect = 2e-18
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 2/93 (2%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTVRNLS 261
           AP  +++ +VT T+  + W  PS+ +  + + Y  K      + I        Y++ NL 
Sbjct: 5   APSQIEVKDVTDTTALITWMPPSQPVDGFELTYGIKDVPGDRTTIDLTEDENQYSIGNLK 64

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
           P TEYE  +I+        P+     TTG    
Sbjct: 65  PDTEYEVSLISRRGDMSSNPAK-ETFTTGLAAA 96

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 69.0 bits (169), Expect = 2e-14
 Identities = 16/101 (15%), Positives = 38/101 (37%), Gaps = 6/101 (5%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P  +  + ++ T+  I+W PP     +  +  ++L +          +I   +++  + 
Sbjct: 5   APSQIEVKDVTDTTALITWMPP-----SQPVDGFELTYGIKDVPGDRTTIDLTEDENQYS 59

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEV 819
           +  LK  TEY + +++         +   T  T      E 
Sbjct: 60  IGNLKPDTEYEVSLISRRGDMSSNPAK-ETFTTGLAAALEH 99

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 65.1 bits (159), Expect = 5e-13
 Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 5/101 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           AP  ++V+ ++ +T +I W  P   +  + G+++ Y   + +P       + ++    +I
Sbjct: 5   APSQIEVKDVTDTTALITWMPP---SQPVDGFELTY-GIKDVPGDRTTIDLTEDENQYSI 60

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPR 584
            +L P T Y + + +          A     T      +  
Sbjct: 61  GNLKPDTEYEVSLISRRGDMSSN-PAKETFTTGLAAALEHH 100

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 5/80 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW--NDTYAKAKHHRRIGLVETYSLTG 681
           P  +   D+ +T   + W  P+   + +  +EL +   D                YS+  
Sbjct: 6   PSQIEVKDVTDTTALITWMPPS---QPVDGFELTYGIKDVPGDRTTIDLTEDENQYSIGN 62

Query: 682 LYPNTLYYIWLAAQSPRGEG 701
           L P+T Y + L ++      
Sbjct: 63  LKPDTEYEVSLISRRGDMSS 82

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 11/78 (14%)

Query: 297 APRDVQVRPLSSSTMVIQWDEP-----------ETPNGQITAKHHRRIGLVETYSLTGLY 345
           AP  ++V+ ++ +T +I W  P              +                YS+  L 
Sbjct: 5   APSQIEVKDVTDTTALITWMPPSQPVDGFELTYGIKDVPGDRTTIDLTEDENQYSIGNLK 64

Query: 346 PNTLYYIWLAAQSPRGEG 363
           P+T Y + L ++      
Sbjct: 65  PDTEYEVSLISRRGDMSS 82

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 121

 Score = 80.9 bits (200), Expect = 2e-18
 Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE---TLLYYVIQYK 236
           G   +S       + +P    P AP    IS  + TSV + W         +  + ++YK
Sbjct: 1   GSSGSSGSQPDHGRLSP----PEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYK 56

Query: 237 PKAAN---TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGET 292
                      +           +  L     Y+F + A+N LG   PS+P        +
Sbjct: 57  KLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116

Query: 293 EPGTA 297
            P + 
Sbjct: 117 GPSSG 121

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 121

 Score = 62.4 bits (152), Expect = 6e-12
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 10/125 (8%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQF 756
           G   ++   P   +   P   P   +    S TS+ ++W P      NG   I  +++++
Sbjct: 1   GSSGSSGSQPDHGRLSPPE-APDRPTISTASETSVYVTWIPR----GNGGFPIQSFRVEY 55

Query: 757 VETGRSDS--EASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP-ITIRTHE 813
            +  +      A+     ++ S  +  L+K   Y+  V A   +G+   S P        
Sbjct: 56  KKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSG 115

Query: 814 DDPSE 818
             PS 
Sbjct: 116 SGPSS 120

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 121

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 9/123 (7%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKV-YYTQD 522
           G   ++   P   +   P  AP    +   S +++ + W         I  ++V Y    
Sbjct: 1   GSSGSSGSQPDHGRLSPPE-APDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLK 59

Query: 523 QSLPMSAWET--QVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQG 578
           +      W      +  ++L+  I+ L     Y  RV+A   +G    SAP         
Sbjct: 60  KV---GDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116

Query: 579 VPS 581
            PS
Sbjct: 117 GPS 119

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 121

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 11/51 (21%), Positives = 16/51 (31%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISY 613
           G    S       +   P  P         ET+V + W    + G  I S+
Sbjct: 1   GSSGSSGSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSF 51

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 80.2 bits (198), Expect = 2e-18
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 1/97 (1%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR 258
           +   AP D++  EVT  +  L WT P      Y++ +      T    + G IT++  + 
Sbjct: 6   SGLEAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQTQEILLPGGITSH-QLL 64

Query: 259 NLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPG 295
            L P T Y   + A+      PP S +  T G    G
Sbjct: 65  GLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGLRISG 101

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 55.9 bits (135), Expect = 7e-10
 Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 7/86 (8%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P+++  + ++  +  ++W  PPV         Y L F   G    E  +      TS  
Sbjct: 10  APRDLEAKEVTPRTALLTWTEPPVR-----PAGYLLSFHTPGGQTQEILLPG--GITSHQ 62

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSS 804
           L  L   T Y   + A       P  
Sbjct: 63  LLGLFPSTSYNARLQAMWGQSLLPPV 88

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 55.9 bits (135), Expect = 9e-10
 Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 9/103 (8%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-T 542
           APRD++ + ++  T ++ W EP     +  GY + +           +  ++     +  
Sbjct: 10  APRDLEAKEVTPRTALLTWTEP---PVRPAGYLLSFHTPGG----QTQEILLPGGITSHQ 62

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRD 585
           +  L P T Y  R+QA       P        T     S P  
Sbjct: 63  LLGLFPSTSYNARLQAMWGQSLLP-PVSTSFTTGGLRISGPSS 104

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 5/99 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           PRDL A ++      L W++P         Y L ++    + +     G + ++ L GL+
Sbjct: 11  PRDLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLF 67

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
           P+T Y   L A   +                +    P +
Sbjct: 68  PSTSYNARLQAMWGQSLLPPVSTSFTTGGLRIS--GPSS 104

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 14/88 (15%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEP-----------ETPNGQITAKHHRRIGLV 336
           ++G +    APRD++ + ++  T ++ W EP            TP G    +     G +
Sbjct: 2   SSGSSGLE-APRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGG--QTQEILLPGGI 58

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEGA 364
            ++ L GL+P+T Y   L A   +    
Sbjct: 59  TSHQLLGLFPSTSYNARLQAMWGQSLLP 86

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 81.0 bits (200), Expect = 2e-18
 Identities = 35/122 (28%), Positives = 48/122 (39%), Gaps = 13/122 (10%)

Query: 467 ATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSL 525
            ++           P  +P   QV P  SST  +Q+DEPE   G  I  YK  +      
Sbjct: 1   GSSGSSG-------PS-SPSIDQVEP-YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEE 51

Query: 526 PMSAWETQVVDNNQLT--TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ-QGVPSQ 582
              +      + +     TI  L P T Y +R+ A    G G +SA    KTQ    PS 
Sbjct: 52  VWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSA 111

Query: 583 PR 584
           P+
Sbjct: 112 PK 113

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 74.0 bits (182), Expect = 5e-16
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 9/109 (8%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANT----PYSEISGI 250
           + P +P  +   E  +++ ++ +  P  T    +L Y  +++           Y      
Sbjct: 6   SGPSSP-SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 64

Query: 251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPR 299
           +    T+  L P T Y   + A+N  G G  S+ +   T      +AP+
Sbjct: 65  MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPK 113

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 60.9 bits (148), Expect = 2e-11
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 10/111 (9%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASI 768
           +    P +P      EP  S++ ++ ++ P    + G   I+ YK ++   G     +  
Sbjct: 3   SGSSGPSSP-SIDQVEP-YSSTAQVQFDEP---EATGGVPILKYKAEWRAVGEEVWHSKW 57

Query: 769 VTLK---NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
              K    +    +  LK  T Y + + A    G G  S     +T     
Sbjct: 58  YDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVRE 108

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 49.0 bits (117), Expect = 3e-07
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 20/104 (19%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QIT-----------AKHHRRIGL 335
           ++G + P  +P   QV P  SST  +Q+DEPE   G  I               H +   
Sbjct: 2   SSGSSGPS-SPSIDQVEP-YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD 59

Query: 336 V------ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
                     ++ GL P T Y + LAA + +G G  +     +T
Sbjct: 60  AKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 103

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 48.6 bits (116), Expect = 5e-07
 Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 626 DLRAVDIQETAVTLAWSKPTHSG-ENIISYELYWNDTYAKAKHHRRIGLVE-----TYSL 679
            +  V+   +   + + +P  +G   I+ Y+  W     +  H +     E       ++
Sbjct: 12  SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTI 71

Query: 680 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721
            GL P T Y + LAA + +G G  +     +T+     + P+
Sbjct: 72  VGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPK 113

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 860 VTGLQPDTIYTIQVAALTRKGDGDRSKPETIKT-PGGVPNRPHVN 903
           + GL+P+T Y +++AAL  KG G+ S     KT P   P+ P + 
Sbjct: 71  IVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLE 115

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 80.2 bits (198), Expect = 3e-18
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 6/112 (5%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR 258
           + P  P  ++   +T     L W  P   +  Y IQ     A    +E  G     Y + 
Sbjct: 6   SGPDGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPLQAETPG-SAVDYPLH 64

Query: 259 NLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSST 310
           +L  +T Y   +  +       P+S    T  E     APRD++ + ++ S 
Sbjct: 65  DLVLHTNYTATVRGLRGPNLTSPASITFTTGLE-----APRDLEAKEVTPSG 111

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 67.5 bits (165), Expect = 1e-13
 Identities = 24/134 (17%), Positives = 43/134 (32%), Gaps = 21/134 (15%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++ P             P  ++   L+    V+ W  P      +  Y +  T   
Sbjct: 1   GSSGSSGP-----------DGPTQLRALNLTEGFAVLHWKPP---QNPVDTYDIQVTAPG 46

Query: 524 SLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
           + P    + +   +     + DL  HT YT  V+           A +   T       P
Sbjct: 47  APP---LQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNLTS-PASITFTT---GLEAP 99

Query: 584 RDLRAVDIQETAVT 597
           RDL A ++  +  +
Sbjct: 100 RDLEAKEVTPSGPS 113

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 55.1 bits (133), Expect = 2e-09
 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 8/110 (7%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P  LRA+++ E    L W  P      + +Y++      A        G    Y L  L 
Sbjct: 11  PTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLV 67

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSI 733
            +T Y   +         +    I   T        P+++  + ++ +  
Sbjct: 68  LHTNYTATVRGLRGPNLTSPA-SITFTT----GLEAPRDLEAKEVTPSGP 112

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 54.4 bits (131), Expect = 3e-09
 Identities = 17/105 (16%), Positives = 29/105 (27%), Gaps = 8/105 (7%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P  +    L+     + W+PP        I         T          T  +   + 
Sbjct: 10  GPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQV-------TAPGAPPLQAETPGSAVDYP 62

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQ 823
           L +L   T Y   V           +  IT  T  + P ++   +
Sbjct: 63  LHDLVLHTNYTATVRGLRGPNLTSPA-SITFTTGLEAPRDLEAKE 106

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 17/100 (17%), Positives = 27/100 (27%), Gaps = 16/100 (16%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETP---------NGQITAKHHRRIGLVET 338
           ++G + P   P  ++   L+    V+ W  P+ P                     G    
Sbjct: 2   SSGSSGP-DGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPLQAETPGSAVD 60

Query: 339 YSLTGLYPNTLYYIWLAAQSPRGEG------ATTPPIPVR 372
           Y L  L  +T Y   +                TT     R
Sbjct: 61  YPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEAPR 100

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 79.8 bits (197), Expect = 3e-18
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 5/96 (5%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF 777
           + P  +     + TS+ ISW+ P    S+  + YY++ + ETG +          + ++ 
Sbjct: 6   SVPTKLEVVAATPTSLLISWDAPM---SSSSVYYYRITYGETGGNSPVQEFTVPYSSSTA 62

Query: 778 VLDELKKWTEYRIWVLAGTSIGDGPS--SYPITIRT 811
            +  L    +Y I V A      G      PI+I  
Sbjct: 63  TISGLSPGVDYTITVYAWGEDSAGYMFMYSPISINY 98

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 77.1 bits (190), Expect = 3e-17
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 3/94 (3%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSE--TLLYYVIQYKPKAANTPYSEIS-GIITTYY 255
           ++   P  +++   T TS+ + W  P    ++ YY I Y     N+P  E +    ++  
Sbjct: 3   SVSSVPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEFTVPYSSSTA 62

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           T+  LSP  +Y   + A      G     + I+ 
Sbjct: 63  TISGLSPGVDYTITVYAWGEDSAGYMFMYSPISI 96

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 69.0 bits (169), Expect = 2e-14
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 6/95 (6%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-T 542
            P  ++V   + ++++I WD P   +  +  Y++ Y +      S  +   V  +  T T
Sbjct: 7   VPTKLEVVAATPTSLLISWDAPM-SSSSVYYYRITYGETGG--NSPVQEFTVPYSSSTAT 63

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGP--LSAPVLVKT 575
           IS L+P   YTI V A+     G   + +P+ +  
Sbjct: 64  ISGLSPGVDYTITVYAWGEDSAGYMFMYSPISINY 98

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 54.4 bits (131), Expect = 3e-09
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 3/91 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
           P  L  V    T++ ++W  P  S  ++  Y + + +T   +            T +++G
Sbjct: 8   PTKLEVVAATPTSLLISWDAPMSSS-SVYYYRITYGETGGNSPVQEFTVPYSSSTATISG 66

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
           L P   Y I + A      G      P+   
Sbjct: 67  LSPGVDYTITVYAWGEDSAGYMFMYSPISIN 97

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 50.9 bits (122), Expect = 5e-08
 Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 14/98 (14%)

Query: 290 GETEPGTAPRDVQVRPLSSSTMVIQWDEPETP-------------NGQITAKHHRRIGLV 336
           G +     P  ++V   + ++++I WD P +               G    +        
Sbjct: 1   GSSVSS-VPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEFTVPYSS 59

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
            T +++GL P   Y I + A      G      P+   
Sbjct: 60  STATISGLSPGVDYTITVYAWGEDSAGYMFMYSPISIN 97

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 Length = 111

 Score = 80.1 bits (198), Expect = 4e-18
 Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 6/103 (5%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGII-TTYY 255
             AP  + + +VT T+  L W  P       +  Y+++Y  + +          +    +
Sbjct: 9   TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGF 68

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGETEPGTA 297
           TV++L       F ++ VN  GR  P++    +T  E+ P + 
Sbjct: 69  TVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRESGPSSG 111

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 Length = 111

 Score = 56.6 bits (137), Expect = 5e-10
 Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 8/108 (7%)

Query: 715 VPGAP--PQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASIVT 770
             G    PQ+++ E ++ T+  + W PP      G   I  Y +++   G  +   +   
Sbjct: 5   SSGPTSAPQHLTVEDVTDTTTTLKWRPP---DRIGAGGIDGYLVEYCLEGSEEWVPANKE 61

Query: 771 LKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPI-TIRTHEDDPS 817
              +  F + +L         V+     G    +  +  +   E  PS
Sbjct: 62  PVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRESGPS 109

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 Length = 111

 Score = 56.6 bits (137), Expect = 6e-10
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLT- 541
           AP+ + V  ++ +T  ++W  P+      I GY V Y  + S     W     +  +   
Sbjct: 11  APQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGS---EEWVPANKEPVERCG 67

Query: 542 -TISDLTPHTIYTIRVQAFTSVGPGP---LSAPVLVK 574
            T+ DL        RV      G      L  PV ++
Sbjct: 68  FTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIR 104

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 Length = 111

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 6/101 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSG-ENIISY--ELYWNDTYAKAKHHRRIGLVETYSLT 680
           P+ L   D+ +T  TL W  P   G   I  Y  E     +      ++       +++ 
Sbjct: 12  PQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVK 71

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPI-PVRTKQYVPGAPP 720
            L         +   +  G       + PV  ++   G   
Sbjct: 72  DLPTGARILFRVVGVNIAGRSEPATLLQPVTIRE--SGPSS 110

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215

 Score = 83.1 bits (205), Expect = 4e-18
 Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 11/205 (5%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY--WNDTYAKAKHHRRIGLVETYSL 679
            KP++L  +  +   +   W     +     ++ L   W          +R         
Sbjct: 9   EKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKAKRDTPTSCTVD 67

Query: 680 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ-NVSCEPLSSTSIRISWE 738
                     +W+ A++  G+  +         +  P  P   +V      S+ ++++W 
Sbjct: 68  YSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWT 127

Query: 739 PPPVERSNGHIVYYKLQFVETGRSDSEASIV--TLKNQTSFVLDELKKWTEYRIWVLAGT 796
            P     +  I+ Y +Q+     S         T   ++SF + +LK +TEY   +    
Sbjct: 128 NPS--IKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMK 185

Query: 797 SIGDG---PSSYPITIRTHEDDPSE 818
             G G     S   +  T+ED PS+
Sbjct: 186 EDGKGYWSDWSEEASGITYEDRPSK 210

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215

 Score = 72.7 bits (178), Expect = 1e-14
 Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 7/146 (4%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS--SSTMVIQWDE 504
                   +W+ A++  G+  +         + +P   P ++ V      SS + + W  
Sbjct: 70  TVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPN-PPHNLSVINSEELSSILKLTWTN 128

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVG 563
           P   +  I  Y + Y    +   S    +   + + + T+ DL P T Y  R++     G
Sbjct: 129 PSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDG 188

Query: 564 PGPLSA---PVLVKTQQGVPSQPRDL 586
            G  S         T +  PS+    
Sbjct: 189 KGYWSDWSEEASGITYEDRPSKEPSF 214

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215

 Score = 71.9 bits (176), Expect = 3e-14
 Identities = 29/245 (11%), Positives = 66/245 (26%), Gaps = 44/245 (17%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL 540
           P   P+++         M  +W +        T + +          +  + +       
Sbjct: 7   PPEKPKNLSCIVNEGKKMRCEW-DGGRETHLETNFTLKSEWATH-KFADCKAKRDTPTSC 64

Query: 541 TTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETA--VTL 598
           T            + V+A  ++G             +  P+ P +L  ++ +E +  + L
Sbjct: 65  TVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKL 124

Query: 599 AWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 658
            W+ P+     I+ Y +                                      Y    
Sbjct: 125 TWTNPSIKSVIILKYNIQ-------------------------------------YRTKD 147

Query: 659 NDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA---TTPPIPVRTKQYV 715
             T+++           ++++  L P T Y   +      G+G     +      T +  
Sbjct: 148 ASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDR 207

Query: 716 PGAPP 720
           P   P
Sbjct: 208 PSKEP 212

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215

 Score = 68.1 bits (166), Expect = 5e-13
 Identities = 28/199 (14%), Positives = 57/199 (28%), Gaps = 25/199 (12%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLY--YVIQYK-PKAANTPYSEISGIITTYYTV 257
           P  P ++         +R +W    ET L   + ++ +                T+    
Sbjct: 8   PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVD 67

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLS--SSTMVIQW 315
            +   +   E ++ A N LG+            + +P   P ++ V      SS + + W
Sbjct: 68  YSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPN-PPHNLSVINSEELSSILKLTW 126

Query: 316 DEPETPNGQI----------------TAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 359
             P   +  I                            ++++  L P T Y   +     
Sbjct: 127 TNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKE 186

Query: 360 RGEGA---TTPPIPVRTKQ 375
            G+G     +      T +
Sbjct: 187 DGKGYWSDWSEEASGITYE 205

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215

 Score = 66.9 bits (163), Expect = 1e-12
 Identities = 30/210 (14%), Positives = 60/210 (28%), Gaps = 28/210 (13%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
           +P   P+N+SC       +R  W+     R       + L+        ++         
Sbjct: 6   LPPEKPKNLSCIVNEGKKMRCEWDGG---RETHLETNFTLKSEWATHKFADCKAKRDTPT 62

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE----DDPSEVCPTQNDFRK-- 828
           +  V      +    +WV A  ++G   +S  I          + P  +    ++     
Sbjct: 63  SCTVDYSTVYFVNIEVWVEAENALGKV-TSDHINFDPVYKVKPNPPHNLSVINSEELSSI 121

Query: 829 -----NKKTNGSNFKGGY------LNDPMRFDVS----DGGALELNVTGLQPDTIYTIQV 873
                   +  S     Y       +      +             V  L+P T Y  ++
Sbjct: 122 LKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRI 181

Query: 874 AALTRKGDG---DRSKPETIKTPGGVPNRP 900
             +   G G   D S+  +  T    P++ 
Sbjct: 182 RCMKEDGKGYWSDWSEEASGITYEDRPSKE 211

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215

 Score = 58.8 bits (142), Expect = 8e-10
 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 9/107 (8%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETL---LYYVIQYKPKAA---NTPYSEISGIITTY 254
           P   L V  SE  ++ ++L WT PS      L Y IQY+ K A   +    E +    + 
Sbjct: 106 PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSS 165

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRG---PPSSPAVITTGETEPGTAP 298
           +TV++L P+TEY F I  +   G+G     S  A   T E  P   P
Sbjct: 166 FTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKEP 212

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 79.8 bits (197), Expect = 4e-18
 Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 15/119 (12%)

Query: 466 GATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSL 525
           G++    P           P  + +   + +T ++QW  P+   G++ GY++ Y +    
Sbjct: 1   GSSGSSGP---------GRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADE- 49

Query: 526 PMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
             +   T     +    T++ L   T Y  R+ A    G G       ++T + +    
Sbjct: 50  --ARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKE-IRTPEDLSGPS 105

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 74.7 bits (184), Expect = 2e-16
 Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P  P  + IS     +  L W  P E    LL Y +QY       P +   G    ++TV
Sbjct: 8   PGRP-TMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTV 66

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
             L   T Y F + A N  G G      + T 
Sbjct: 67  TGLHKGTTYIFRLAAKNRAGLGEEFEKEIRTP 98

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 72.1 bits (177), Expect = 2e-15
 Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT 770
           +    PG P   +S    +  +  + W PP  +   G ++ Y+LQ+          +I  
Sbjct: 3   SGSSGPGRPTMMIS--TTAMNTALLQWHPP--KELPGELLGYRLQYCRAD-EARPNTIDF 57

Query: 771 LKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
            K+   F +  L K T Y   + A    G G       IRT ED   
Sbjct: 58  GKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEF-EKEIRTPEDLSG 103

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 2/95 (2%)

Query: 626 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET-YSLTGLYP 684
            +           L W  P      ++ Y L +        +    G  +  +++TGL+ 
Sbjct: 12  TMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHK 71

Query: 685 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAP 719
            T Y   LAA++  G G       +RT + + G  
Sbjct: 72  GTTYIFRLAAKNRAGLGEEFEKE-IRTPEDLSGPS 105

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 47.4 bits (113), Expect = 9e-07
 Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 15/99 (15%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA-------KHHRRIGLVE--- 337
           ++G + PG  P  + +   + +T ++QW  P+   G++             R   ++   
Sbjct: 2   SSGSSGPG-RPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGK 59

Query: 338 ---TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
               +++TGL+  T Y   LAA++  G G          
Sbjct: 60  DDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKEIRTP 98

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 860 VTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
           VTGL   T Y  ++AA  R G G+  + E I+TP  +    
Sbjct: 66  VTGLHKGTTYIFRLAAKNRAGLGEEFEKE-IRTPEDLSGPS 105

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 79.7 bits (197), Expect = 5e-18
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 4/103 (3%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITT 253
           +  P  P  VKI +V   +V L WT P +     +  Y IQ   K +   ++ I     T
Sbjct: 15  IDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRT 74

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGT 296
             T+  L    EY F + + N  G    ++    +      G 
Sbjct: 75  SATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVIARDGK 117

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 53.9 bits (130), Expect = 6e-09
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 9/105 (8%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           PG  P+ V++  +    + + W  P+      ITGY +     +S     W T +   ++
Sbjct: 18  PG-PPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKS---MEWFTVIEHYHR 73

Query: 540 LT-TISDLTPHTIYTIRVQAFTSVG---PGPLSAPVLVKTQQGVP 580
            + TI++L     Y  RV +    G      ++    V  + G  
Sbjct: 74  TSATITELVIGNEYYFRVFSENMCGLSEDATMTKESAVIARDGKI 118

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASIVTLK 772
            PG PPQ V  E +   ++ ++W PP     +G+  I  Y +Q  +    +    ++   
Sbjct: 17  RPG-PPQIVKIEDVWGENVALTWTPPK---DDGNAAITGYTIQKADKKSMEWFT-VIEHY 71

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP 806
           ++TS  + EL    EY   V +    G    +  
Sbjct: 72  HRTSATITELVIGNEYYFRVFSENMCGLSEDATM 105

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 6/99 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSG-ENIISYEL-YWNDTYAKAKHHRRIGLVETYSLTG 681
           P+ ++  D+    V L W+ P   G   I  Y +   +    +           + ++T 
Sbjct: 21  PQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITE 80

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
           L     YY  + +++  G           TK+    A  
Sbjct: 81  LVIGNEYYFRVFSENMCGLSEDATM----TKESAVIARD 115

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 79.3 bits (196), Expect = 5e-18
 Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 6/105 (5%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANT-PYSEISGIITT 253
           +    P  + +  VT T+V + W  P       L  YV++Y  +       +    I  T
Sbjct: 6   SGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKT 65

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGETEPGTA 297
            +T+  L    +    + AVN  G   P      I   E+ P + 
Sbjct: 66  KFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKESGPSSG 110

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 58.5 bits (142), Expect = 1e-10
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASI 768
           +      +PP  ++ + ++ T++ + W PP      G   +  Y L++   G  D   + 
Sbjct: 2   SSGSSGTSPPTLLTVDSVTDTTVTMRWRPPD---HIGAAGLDGYVLEYCFEGTEDWIVAN 58

Query: 769 VTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPI-TIRTHEDDPS 817
             L ++T F +  L    +  + V A  + G     Y    I   E  PS
Sbjct: 59  KDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKESGPS 108

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 9/105 (8%)

Query: 476 TKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQV 534
           +      + P  + V  ++ +T+ ++W  P+      + GY + Y  + +     W    
Sbjct: 2   SSGSSGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGT---EDWIVAN 58

Query: 535 VDNNQLT--TISDLTPHTIYTIRVQAFTSVGPGP---LSAPVLVK 574
            D    T  TI+ L       +RV+A  + G       S P+LVK
Sbjct: 59  KDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVK 103

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 6/101 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSG-ENIISY--ELYWNDTYAKAKHHRRIGLVETYSLT 680
           P  L    + +T VT+ W  P H G   +  Y  E  +  T      ++ +     +++T
Sbjct: 11  PTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTIT 70

Query: 681 GLYPNTLYYIWLAAQSPRGEGA-TTPPIPVRTKQYVPGAPP 720
           GL  +   ++ + A +  G         P+  K+   G   
Sbjct: 71  GLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKE--SGPSS 109

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 15/110 (13%), Positives = 41/110 (37%), Gaps = 17/110 (15%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITA--------------KHHRR 332
           ++G +     P  + V  ++ +T+ ++W  P+      +                  ++ 
Sbjct: 2   SSGSSGTS-PPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKD 60

Query: 333 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA-TTPPIPVRTKQYGKTPG 381
           +     +++TGL  +   ++ + A +  G         P+  K+ G + G
Sbjct: 61  LIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKESGPSSG 110

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 77.1 bits (190), Expect = 2e-17
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 1/88 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTVRNLS 261
            P  +  ++V   S+++ W  P   +  Y + Y            +         ++ L 
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLR 63

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           P +EY   ++A+++     P      T 
Sbjct: 64  PGSEYTVSVVALHDDMESQPLIGTQSTA 91

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 60.9 bits (148), Expect = 1e-11
 Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P+ +    +   ++ I W+ P    GQ++ Y+V Y+  +      +     + +    +
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESP---QGQVSRYRVTYSSPEDGIHELFPAPDGEEDT-AEL 59

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581
             L P + YT+ V A         S P++      +P+
Sbjct: 60  QGLRPGSEYTVSVVALHDDME---SQPLIGTQSTAIPA 94

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 58.6 bits (142), Expect = 7e-11
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 8/99 (8%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P+ ++   +   SI+I+WE P      G +  Y++ +        E        + +  
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESP-----QGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAE 58

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
           L  L+  +EY + V+A   + D   S P+        P+
Sbjct: 59  LQGLRPGSEYTVSVVA---LHDDMESQPLIGTQSTAIPA 94

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 5/80 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
           P+ L   D+   ++ +AW  P      +  Y + ++              G  +T  L G
Sbjct: 5   PKGLAFTDVDVDSIKIAWESPQG---QVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQG 61

Query: 682 LYPNTLYYIWLAAQSPRGEG 701
           L P + Y + + A     E 
Sbjct: 62  LRPGSEYTVSVVALHDDMES 81

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 11/78 (14%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPE-----------TPNGQITAKHHRRIGLVETYSLTGLY 345
            P+ +    +   ++ I W+ P+           +P   I        G  +T  L GL 
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLR 63

Query: 346 PNTLYYIWLAAQSPRGEG 363
           P + Y + + A     E 
Sbjct: 64  PGSEYTVSVVALHDDMES 81

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 137

 Score = 78.1 bits (192), Expect = 3e-17
 Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 12/112 (10%)

Query: 197 LLTLPVAPLDVKISEVTATSVRLDWTYPSET------------LLYYVIQYKPKAANTPY 244
              L    +    S++ A +V L W+ PS              L  Y +       +  Y
Sbjct: 14  FEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKY 73

Query: 245 SEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGT 296
             +     T  T+ +L P  +Y   + A  N  +G PS   + TT   EP  
Sbjct: 74  KSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDI 125

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 137

 Score = 66.5 bits (162), Expect = 4e-13
 Identities = 28/159 (17%), Positives = 41/159 (25%), Gaps = 33/159 (20%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 622
           G    S     K  + + S      A DIQ   V L WS P+                  
Sbjct: 1   GSSGSSGDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDE--------- 51

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI-GLVETYSLTG 681
                                   S   +  YE+  + T    K+     G     +L  
Sbjct: 52  -----------------------SSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLND 88

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
           L P   Y+  + A+    +G  +      T    P  P 
Sbjct: 89  LKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPN 127

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 137

 Score = 66.2 bits (161), Expect = 4e-13
 Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 14/130 (10%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG---------QITG 514
           G   ++     +  +    +         + + T+V+ W  P +            ++ G
Sbjct: 1   GSSGSSGDEETKAFEALL-SNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYG 59

Query: 515 YKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLV 573
           Y+V  +             V    +   T++DL P   Y  +VQA  +   G  S   + 
Sbjct: 60  YEVLISSTGK---DGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIF 116

Query: 574 KTQQGVPSQP 583
            T    P  P
Sbjct: 117 TTLSCEPDIP 126

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 137

 Score = 65.4 bits (159), Expect = 8e-13
 Identities = 21/126 (16%), Positives = 49/126 (38%), Gaps = 9/126 (7%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH-------IVY 751
           G   ++     +  + +     + V+ + + + ++ ++W PP    +          +  
Sbjct: 1   GSSGSSGDEETKAFEALLSNIVKPVASD-IQARTVVLTWSPPSSLINGETDESSVPELYG 59

Query: 752 YKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           Y++    TG+ D +   V +  +T+  L++LK   +Y   V A  +   G  S      T
Sbjct: 60  YEVLISSTGK-DGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTT 118

Query: 812 HEDDPS 817
              +P 
Sbjct: 119 LSCEPD 124

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 137

 Score = 48.8 bits (116), Expect = 5e-07
 Identities = 16/121 (13%), Positives = 30/121 (24%), Gaps = 23/121 (19%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRR---- 332
           G    S        E    +         + + T+V+ W  P +     T +        
Sbjct: 1   GSSGSSGDEETKAFEALL-SNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYG 59

Query: 333 ------------------IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
                             +G     +L  L P   Y+  + A+    +G  +      T 
Sbjct: 60  YEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTL 119

Query: 375 Q 375
            
Sbjct: 120 S 120

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 137

 Score = 43.8 bits (103), Expect = 3e-05
 Identities = 13/51 (25%), Positives = 19/51 (37%)

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
           V  G    + +  L+P   Y  +V A      G  S+ E   T    P+ P
Sbjct: 76  VYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIP 126

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95

 Score = 76.4 bits (188), Expect = 4e-17
 Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 1/92 (1%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTV 257
              +      ++E+TA+S  + W   S+T+  + ++Y+          +      T   +
Sbjct: 4   GSHLVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNI 63

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
            +L P  +Y   +  ++  G          TT
Sbjct: 64  PDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 95

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95

 Score = 53.3 bits (128), Expect = 5e-09
 Identities = 12/93 (12%), Positives = 33/93 (35%), Gaps = 5/93 (5%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
              + S   ++++S  +SW           +  +++++  +   D    +      TS  
Sbjct: 8   VATSESVTEITASSFVVSWVSAS-----DTVSGFRVEYELSEEGDEPQYLDLPSTATSVN 62

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           + +L    +Y + V   +  G+       +  T
Sbjct: 63  IPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 95

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95

 Score = 52.5 bits (126), Expect = 1e-08
 Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 6/93 (6%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-T 542
                 V  +++S+ V+ W         ++G++V Y   +       +   + +   +  
Sbjct: 8   VATSESVTEITASSFVVSWVSAS---DTVSGFRVEYELSEE--GDEPQYLDLPSTATSVN 62

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
           I DL P   Y + V   +  G   L       T
Sbjct: 63  IPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 95

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95

 Score = 38.6 bits (90), Expect = 8e-04
 Identities = 8/80 (10%), Positives = 26/80 (32%), Gaps = 5/80 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
                  +I  ++  ++W   +   + +  + + +  +    +           + ++  
Sbjct: 9   ATSESVTEITASSFVVSWVSAS---DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPD 65

Query: 682 LYPNTLYYIWLAAQSPRGEG 701
           L P   Y + +   S  GE 
Sbjct: 66  LLPGRKYIVNVYQISEDGEQ 85

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 77.2 bits (190), Expect = 5e-17
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 489 QVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPM-SAWETQVVDNN--QLTTISD 545
               L+ +T+ + W         I GY+V Y Q   L   S+W+         +   + +
Sbjct: 23  NPVVLTPTTVQVTWTVDR-QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVN 81

Query: 546 LTPHTIYTIRVQAFTSVGPGPLSAPVLVKT-QQGVPSQ 582
           L     Y I+V+ + +   G  S    V+T ++  PS 
Sbjct: 82  LKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESGPSS 119

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 75.3 bits (185), Expect = 2e-16
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 726 EPLSSTSIRISWE-PPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKK 784
             L+ T+++++W      +   G+ V Y+        S  +     +  + S VL  LKK
Sbjct: 25  VVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKK 84

Query: 785 WTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
              Y I V    +   G  S   T+RT E+  
Sbjct: 85  GVTYEIKVRPYFNEFQGMDSESKTVRTTEESG 116

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 65.3 bits (159), Expect = 5e-13
 Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 7/97 (7%)

Query: 208 KISEVTATSVRLDWTYPSET--LLYYVIQYKPKAANTPYS-----EISGIITTYYTVRNL 260
               +T T+V++ WT   +   +  Y + Y+  +     S     +          + NL
Sbjct: 23  NPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNL 82

Query: 261 SPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
                YE  +    N  +G  S    + T E    ++
Sbjct: 83  KKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESGPSS 119

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 16/99 (16%), Positives = 29/99 (29%), Gaps = 9/99 (9%)

Query: 629 AVDIQETAVTLAWSKPTHSGENIISYELYW------NDTYAKAKHHRRIGLVETYSLTGL 682
            V +  T V + W+        I  Y + +        T +      ++    +  L  L
Sbjct: 24  PVVLTPTTVQVTWTVDRQPQF-IQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNL 82

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721
                Y I +       +G  +    VRT +     P  
Sbjct: 83  KKGVTYEIKVRPYFNEFQGMDSESKTVRTTE--ESGPSS 119

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 847 RFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
             D          +  L+    Y I+V     +  G  S+ +T++T 
Sbjct: 66  NLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTT 112

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 42.6 bits (100), Expect = 5e-05
 Identities = 12/92 (13%), Positives = 23/92 (25%), Gaps = 19/92 (20%)

Query: 302 QVRPLSSSTMVIQWDEPETPNGQIT------------------AKHHRRIGLVETYSLTG 343
               L+ +T+ + W         I                        ++    +  L  
Sbjct: 23  NPVVLTPTTVQVTWTVDR-QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVN 81

Query: 344 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
           L     Y I +       +G  +    VRT +
Sbjct: 82  LKKGVTYEIKVRPYFNEFQGMDSESKTVRTTE 113

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 76.4 bits (188), Expect = 6e-17
 Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 13/108 (12%)

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWD--EPETPNGQITGYKV-YYTQDQSLPMSAWETQVVD 536
               +   +++       + + W    P  P G    Y++    QD+       E +V  
Sbjct: 8   AESLSGLSLKLVKKEPRQLELTWAGSRPRNPGG-NLSYELHVLNQDEEWHQMVLEPRV-- 64

Query: 537 NNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPR 584
                 ++ L P T Y +RV+  T +GPGP S     +T    PS P 
Sbjct: 65  -----LLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSP--PSGPS 105

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 69.0 bits (169), Expect = 2e-14
 Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 6/96 (6%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
                 ++         + ++W         G  + Y+L  +       +  +     + 
Sbjct: 9   ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGG-NLSYELHVLNQDEEWHQMVL-----EP 62

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
             +L +L+  T Y + V   T +G GP S     RT
Sbjct: 63  RVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRT 98

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 64.4 bits (157), Expect = 9e-13
 Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 11/103 (10%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITTYYT 256
            ++ L +K+ +     + L W           L Y +    +           ++     
Sbjct: 10  SLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQM----VLEPRVL 65

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPR 299
           +  L P T Y   +  +  LG GP S      T    P + P 
Sbjct: 66  LTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTS---PPSGPS 105

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 56.3 bits (136), Expect = 6e-10
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 6/98 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGEN-IISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
              L+ V  +   + L W+          +SYEL+      + +   ++ L     LT L
Sbjct: 13  GLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHV---LNQDEEWHQMVLEPRVLLTKL 69

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
            P+T Y + +   +P G G  +P    RT    P  P 
Sbjct: 70  QPDTTYIVRVRTLTPLGPGPFSPDHEFRTSP--PSGPS 105

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 51.3 bits (123), Expect = 4e-08
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 10/91 (10%)

Query: 293 EPGTAPRDVQVRPLSSSTMVIQWD--EPETPNGQIT-------AKHHRRIGLVET-YSLT 342
               +   +++       + + W    P  P G ++               ++E    LT
Sbjct: 8   AESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVLEPRVLLT 67

Query: 343 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
            L P+T Y + +   +P G G  +P    RT
Sbjct: 68  KLQPDTTYIVRVRTLTPLGPGPFSPDHEFRT 98

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 860 VTGLQPDTIYTIQVAALTRKGDGDRSKPETIKT 892
           +T LQPDT Y ++V  LT  G G  S     +T
Sbjct: 66  LTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRT 98

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 74.9 bits (184), Expect = 2e-16
 Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 5/111 (4%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYT 256
           + +   P D+++   T TS+ + W     +  YY I Y     N+P  E +        T
Sbjct: 1   MGVSDVPRDLEVVAATPTSLLISWDSGRGSYQYYRITYGETGGNSPVQEFTVPGPVHTAT 60

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGT----APRDVQV 303
           +  L P  +Y   + AV +             +  +         P     
Sbjct: 61  ISGLKPGVDYTITVYAVTDHKPHADGPHTYHESPISINYRTEIDKPSQHHH 111

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 71.1 bits (174), Expect = 6e-15
 Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 14/113 (12%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
           V    P+++     + TS+ ISW+        G   YY++ + ETG +            
Sbjct: 3   VSD-VPRDLEVVAATPTSLLISWDSGR-----GSYQYYRITYGETGGNSPVQEFTVPGPV 56

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPS------SYPITI--RTHEDDPSEV 819
            +  +  LK   +Y I V A T               PI+I  RT  D PS+ 
Sbjct: 57  HTATISGLKPGVDYTITVYAVTDHKPHADGPHTYHESPISINYRTEIDKPSQH 109

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 61.1 bits (148), Expect = 2e-11
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 12/109 (11%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            PRD++V   + ++++I WD      G    Y++ Y +         E  V       TI
Sbjct: 6   VPRDLEVVAATPTSLLISWDSG---RGSYQYYRITYGETGGNS-PVQEFTVPGPVHTATI 61

Query: 544 SDLTPHTIYTIRVQAFTSVGPGP------LSAPVLVK--TQQGVPSQPR 584
           S L P   YTI V A T   P          +P+ +   T+   PSQ  
Sbjct: 62  SGLKPGVDYTITVYAVTDHKPHADGPHTYHESPISINYRTEIDKPSQHH 110

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 5/90 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
           PRDL  V    T++ ++W        +   Y + + +T   +        G V T +++G
Sbjct: 7   PRDLEVVAATPTSLLISWDSGRG---SYQYYRITYGETGGNSPVQEFTVPGPVHTATISG 63

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
           L P   Y I + A +     A  P     +
Sbjct: 64  LKPGVDYTITVYAVTDHKPHADGPHTYHES 93

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETP-----------NGQITAKHHRRIGLVETYSLTGLY 345
            PRD++V   + ++++I WD                 G    +     G V T +++GL 
Sbjct: 6   VPRDLEVVAATPTSLLISWDSGRGSYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLK 65

Query: 346 PNTLYYIWLAAQSPRGEGATTPPIPVRT 373
           P   Y I + A +     A  P     +
Sbjct: 66  PGVDYTITVYAVTDHKPHADGPHTYHES 93

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 74.8 bits (184), Expect = 3e-16
 Identities = 17/102 (16%), Positives = 38/102 (37%), Gaps = 7/102 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITTYYT 256
           PV P      ++ + S ++ W  P +     +  YV++    +    +  I    T  + 
Sbjct: 21  PVKPSVK--GKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHL 78

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAP 298
              L+P   Y   +  +++ G+   S   ++ T     G + 
Sbjct: 79  CDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT-PAVSGPSS 119

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 66.3 bits (162), Expect = 3e-13
 Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 3/121 (2%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQD 522
           G   ++  +   T   +PG   +      + S +  I WD P+   G  I  Y V   + 
Sbjct: 1   GSSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEG 60

Query: 523 QSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ 582
            +   + WE       +      L P   Y +RV   +  G   +S  +LV+T       
Sbjct: 61  SN--GNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVSGPS 118

Query: 583 P 583
            
Sbjct: 119 S 119

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 6/115 (5%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQF 756
           G   ++  +   T    PG P +      + S S +I+W+PP   + NG   I  Y ++ 
Sbjct: 1   GSSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPP---KDNGGATINKYVVEM 57

Query: 757 VETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
            E   + ++  ++        + D L     YR+ V   +  G    S  + ++T
Sbjct: 58  AEGS-NGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 111

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 26/159 (16%), Positives = 40/159 (25%), Gaps = 41/159 (25%)

Query: 563 GPGPLSAPVLVKTQQGVPSQPRDLRAV-DIQETAVTLAWSKPTHSGENIISYELYWNDTY 621
           G    S  V   T    P  P        I   +  + W  P  +G   I+   Y     
Sbjct: 1   GSSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINK--YV---- 54

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTG 681
                   V++ E +    W                              G    +    
Sbjct: 55  --------VEMAEGSNGNKWEMIYS-------------------------GATREHLCDR 81

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
           L P   Y + +   S  G+ A +  + V+T   V G   
Sbjct: 82  LNPGCFYRLRVYCISDGGQSAVSESLLVQT-PAVSGPSS 119

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 21/111 (18%), Positives = 34/111 (30%), Gaps = 14/111 (12%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ------ITAKHH 330
           G    S     TT   +PG   +      + S +  I WD P+   G       +     
Sbjct: 1   GSSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEG 60

Query: 331 RRI--------GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
                      G    +    L P   Y + +   S  G+ A +  + V+T
Sbjct: 61  SNGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 111

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 74.0 bits (182), Expect = 4e-16
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 9/115 (7%)

Query: 466 GATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSL 525
           G++    PV      P T    ++     +++  + W +P        GY +        
Sbjct: 1   GSSGSSGPV------PATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNG- 53

Query: 526 PMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
               +    V    + T+  L  ++ Y  RV+AF   G  P S  ++++T +G  
Sbjct: 54  --GQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 74.0 bits (182), Expect = 4e-16
 Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 5/103 (4%)

Query: 199 TLPVAP-LDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTY 254
            +P  P L ++       S  L W  P  +      Y+++         + E+     T 
Sbjct: 8   PVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELD-DGNGGQFREVYVGKETM 66

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
            TV  L   + Y   + A N  G  P S   V+ T E    ++
Sbjct: 67  CTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSGPSS 109

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 65.2 bits (159), Expect = 5e-13
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 10/116 (8%)

Query: 701 GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG 760
           G++    PV      P  P   +      + S  +SW+ PP   S      Y L+  +  
Sbjct: 1   GSSGSSGPV------PATPILQLEECCTHNNSATLSWKQPP--LSTVPADGYILELDDGN 52

Query: 761 RSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
               +   V +  +T   +D L   + Y   V A    G  P S  + ++T E   
Sbjct: 53  --GGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 57.9 bits (140), Expect = 2e-10
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 3/99 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
              L        + TL+W +P  S      Y L  +D          +G     ++ GL+
Sbjct: 14  ILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLH 73

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
            N+ Y   + A +  G    +  + ++T     G+ P +
Sbjct: 74  FNSTYNARVKAFNKTGVSPYSKTLVLQTS---EGSGPSS 109

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 12/100 (12%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------KHHRRIGLVE 337
            +    P T    ++     +++  + W +P                      R + + +
Sbjct: 4   GSSGPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGK 63

Query: 338 --TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
               ++ GL+ N+ Y   + A +  G    +  + ++T +
Sbjct: 64  ETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSE 103

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 13/49 (26%), Positives = 20/49 (40%)

Query: 849 DVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           +V  G      V GL  ++ Y  +V A  + G    SK   ++T  G  
Sbjct: 58  EVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 Length = 115

 Score = 74.2 bits (182), Expect = 4e-16
 Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 18/114 (15%)

Query: 200 LPVAPLDVKISEVTATSVRLDWTYPS---ETLLYYVIQYKPKAANTPYSEISGII----- 251
               P    ++ ++  SV L W  P      ++ + +QY+       +   +  I     
Sbjct: 2   STYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 61

Query: 252 --------TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
                   +   +V +L P   Y F I+AV +      S+ +       +PG A
Sbjct: 62  KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFY--LQPGAA 113

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 Length = 115

 Score = 61.1 bits (148), Expect = 1e-11
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 12/109 (11%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYY----------TQDQSLPMSAWETQ 533
            P    V  LS  +++++W  P      I  +KV Y          T + ++P    +  
Sbjct: 5   PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWN 64

Query: 534 VVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVL-VKTQQGVP 580
                  T +++DL P   Y  R+ A  S      S        Q G  
Sbjct: 65  SELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAA 113

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 Length = 115

 Score = 54.5 bits (131), Expect = 3e-09
 Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 15/104 (14%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS---------- 764
               PP   +   LS  S+ + W  P        IV +K+Q+   G+  +          
Sbjct: 2   STY-PPTPPNVTRLSDESVMLRWMVP--RNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPY 58

Query: 765 --EASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP 806
                   L    +  + +LK    YR  +LA  S  D   S  
Sbjct: 59  GKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNT 102

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 Length = 115

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 22/137 (16%), Positives = 36/137 (26%), Gaps = 28/137 (20%)

Query: 578 GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAV 637
           G    P       + + +V L W  P + G  I+ +                V  +    
Sbjct: 1   GSTYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIF---------------KVQYRMVGK 45

Query: 638 TLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 697
              W                 N  Y K K +  +G   T S+T L P   Y   + A   
Sbjct: 46  RKNWQTTND------------NIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYS 93

Query: 698 RGEGATTPP-IPVRTKQ 713
             +   +        + 
Sbjct: 94  NNDNKESNTSAKFYLQP 110

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} Length = 114

 Score = 74.1 bits (182), Expect = 5e-16
 Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 7/107 (6%)

Query: 196 PLLTLPVAPLDVKISEVTATSVRLDWTYPSE---TLLYYVIQYKPKAANTPYSEIS-GII 251
             +  P  P  +     +  S +L  T   +    +L Y+++Y+ K     + E      
Sbjct: 4   ASMREPSPP-SIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGN 62

Query: 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAP 298
             +  + +L     YE  I A N LG   P+          +P    
Sbjct: 63  KDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMP--PKPNIIK 107

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} Length = 114

 Score = 53.7 bits (129), Expect = 5e-09
 Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 5/98 (5%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
            P  P  ++  +P S  S ++S        +   I+ Y +++    + D         N+
Sbjct: 8   EPSPP--SIHGQPSSGKSFKLSITKQDDGGA--PILEYIVKYRSKDKEDQWLEKKVQGNK 63

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDG-PSSYPITIRT 811
              +L+ L+    Y + + A   +G   P+ Y  ++  
Sbjct: 64  DHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPP 101

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} Length = 114

 Score = 53.3 bits (128), Expect = 9e-09
 Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 3/87 (3%)

Query: 485 PRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TI 543
           P  +  +P S  +  +   + +     I  Y V Y          W  + V  N+    +
Sbjct: 11  PPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKE--DQWLEKKVQGNKDHIIL 68

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAP 570
             L     Y +++ A   +G    +  
Sbjct: 69  EHLQWTMGYEVQITAANRLGYSEPTVY 95

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} Length = 306

 Score = 78.0 bits (191), Expect = 1e-15
 Identities = 46/346 (13%), Positives = 103/346 (29%), Gaps = 61/346 (17%)

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           +P  +P+ V+V  +     +++W+  +   G +T +   Y   Q   M  W       N 
Sbjct: 2   DPLKSPQKVEVD-IIDDNFILRWNRSDESVGNVT-FSFDY---QKTGMDNWIKLSGCQNI 56

Query: 540 LTTISDLT-----PHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQET 594
            +T  + +      +    +R++A                  +     P ++  ++ ++ 
Sbjct: 57  TSTKCNFSSLKLNVYEEIKLRIRAEKE-NTSSWYEVDSFTPFRKAQIGPPEVH-LEAEDK 114

Query: 595 AVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISY 654
           A+ +  S  T                                    W+    S     +Y
Sbjct: 115 AIVIHISPGTKDSVM-------------------------------WALDGLS----FTY 139

Query: 655 EL-YWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG--EGATTPPIPVRT 711
            L  W ++    +      +   + +  L P T Y + + A        G  +P   ++T
Sbjct: 140 SLVIWKNSSGVEERIE--NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKT 197

Query: 712 KQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA---SI 768
                  PP+N+     +   + + W+      +    V +   F++    +       I
Sbjct: 198 TVENELPPPENIEVSVQNQNYV-LKWDYTY--ANMTFQVQWLHAFLKRNPGNHLYKWKQI 254

Query: 769 VTLKNQTS---FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
              +N  +        + +   Y + V A         S  I   T
Sbjct: 255 PDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDT 300

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} Length = 306

 Score = 67.3 bits (163), Expect = 4e-12
 Identities = 41/312 (13%), Positives = 87/312 (27%), Gaps = 40/312 (12%)

Query: 293 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT----------------AKHHRRIGLV 336
           +P  +P+ V+V  +     +++W+  +   G +T                +         
Sbjct: 2   DPLKSPQKVEVD-IIDDNFILRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTK 60

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEGAT-TPPIPVRTKQYGKTPGFGEQAAKHHRRIGL 395
             +S   L       + + A+                 K     P    +A      I +
Sbjct: 61  CNFSSLKLNVYEEIKLRIRAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHI 120

Query: 396 ----VETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNT 451
                ++        +  Y + +   S   E           +            L P T
Sbjct: 121 SPGTKDSVMWALDGLSFTYSLVIWKNSSGVE----------ERIENIYSRHKIYKLSPET 170

Query: 452 LYYIWLAAQSPRG--EGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN 509
            Y + + A        G  +P   ++T        P +++V   + +  V++WD      
Sbjct: 171 TYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNY-VLKWDYTYANM 229

Query: 510 GQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT-----ISDLTPHTIYTIRVQAFTSVGP 564
                +   + +           Q+ D   + T       ++    IY +RVQA      
Sbjct: 230 TFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNT 289

Query: 565 GPLSAPVLVKTQ 576
              S  +   T+
Sbjct: 290 SFWSEEIKFDTE 301

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} Length = 306

 Score = 66.9 bits (162), Expect = 6e-12
 Identities = 44/304 (14%), Positives = 85/304 (27%), Gaps = 39/304 (12%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENI---ISYELYWNDTYAKAKHHRRIGLVE-TY 677
             P+ +  VDI +    L W++   S  N+     Y+    D + K    + I   +  +
Sbjct: 5   KSPQKVE-VDIIDDNFILRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNF 63

Query: 678 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISW 737
           S   L       + + A+      +          +     PP+ V  E     +I I  
Sbjct: 64  SSLKLNVYEEIKLRIRAEKE-NTSSWYEVDSFTPFRKAQIGPPE-VHLEA-EDKAIVIHI 120

Query: 738 EPP----PVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVL 793
            P      +   +G    Y L   +   S  E  I      +   + +L   T Y + V 
Sbjct: 121 SPGTKDSVMWALDGLSFTYSLVIWKNS-SGVEERIEN--IYSRHKIYKLSPETTYCLKVK 177

Query: 794 AGTSIGDGPSSY-PITIRTHEDDPSEVCPTQNDFRKNKKT---------NGSNFKGGYLN 843
           A          Y P+       +     P   +     +              F+  +L+
Sbjct: 178 AALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLH 237

Query: 844 DPMRFDVSDGGALELNVT--------------GLQPDTIYTIQVAALTRKGDGDRSKPET 889
             ++ +  +       +                +    IY ++V A         S+   
Sbjct: 238 AFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIK 297

Query: 890 IKTP 893
             T 
Sbjct: 298 FDTE 301

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} Length = 306

 Score = 62.2 bits (150), Expect = 2e-10
 Identities = 36/271 (13%), Positives = 77/271 (28%), Gaps = 38/271 (14%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMV-IQWDEP 505
           L       + + A+           +   T   +    P +V +     + ++ I     
Sbjct: 68  LNVYEEIKLRIRAEKENTSSWYE--VDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTK 125

Query: 506 ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGP- 564
           ++    + G    Y+       S  E ++ +      I  L+P T Y ++V+A       
Sbjct: 126 DSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWK 185

Query: 565 -GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK 623
            G  S    +KT       P +   V +Q     L W     +     ++++ W   + K
Sbjct: 186 IGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANM----TFQVQWLHAFLK 241

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
                    +     L   K     EN+ +                     +      ++
Sbjct: 242 ---------RNPGNHLYKWKQIPDCENVKTT--------------------QCVFPQNVF 272

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQY 714
              +Y + + A         +  I   T+  
Sbjct: 273 QKGIYLLRVQASDGNNTSFWSEEIKFDTEIQ 303

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} Length = 306

 Score = 53.8 bits (128), Expect = 1e-07
 Identities = 32/303 (10%), Positives = 75/303 (24%), Gaps = 31/303 (10%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETL--LYYVIQYKPKAAN--TPYSEISGIITTY--YT 256
           +P  V++  +    + L W    E++  + +   Y+    +     S    I +T   ++
Sbjct: 6   SPQKVEVDIIDDNFI-LRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNFS 64

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWD 316
              L+ Y E +  I A            +     + +    P +V +     + ++    
Sbjct: 65  SLKLNVYEEIKLRIRAEKENTSSWYEVDSFTPFRKAQI--GPPEVHLEAEDKAIVI-HIS 121

Query: 317 EPETPNGQITAKHHRRIGLVE-----------------TYSLTGLYPNTLYYIWLAAQSP 359
                +             +                   + +  L P T Y + + A   
Sbjct: 122 PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALL 181

Query: 360 RGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPN---TLYYIWLAA 416
                     PV   +                             Y N    + ++    
Sbjct: 182 TSWK-IGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFL 240

Query: 417 QSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRT 476
           +   G            +    T     Q ++   +Y + + A         +  I   T
Sbjct: 241 KRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDT 300

Query: 477 KQY 479
           +  
Sbjct: 301 EIQ 303

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} Length = 306

 Score = 48.4 bits (114), Expect = 6e-06
 Identities = 28/208 (13%), Positives = 57/208 (27%), Gaps = 26/208 (12%)

Query: 193 KYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT 252
              P + L      + I     T   + W     +  Y ++ +K    ++   E    I 
Sbjct: 102 IGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWK---NSSGVEERIENIY 158

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGR--GPPSSPAVITTGETEPGTAPRDVQVRPLSSST 310
           + + +  LSP T Y   + A        G  S    I T        P +++V   + + 
Sbjct: 159 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNY 218

Query: 311 MVIQWDEPETPNGQI--------------------TAKHHRRIGLVETYSLTGLYPNTLY 350
            V++WD                                    +   +      ++   +Y
Sbjct: 219 -VLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIY 277

Query: 351 YIWLAAQSPRGEGATTPPIPVRTKQYGK 378
            + + A         +  I   T+    
Sbjct: 278 LLRVQASDGNNTSFWSEEIKFDTEIQAF 305

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} Length = 306

 Score = 43.4 bits (101), Expect = 2e-04
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 26/207 (12%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
           P   PQ V  + +    I + W        N    +   +                  + 
Sbjct: 3   PLKSPQKVEVDIIDDNFI-LRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKC 61

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGS 835
           +F   +L  + E ++ + A     +  SS+           +++ P +       K    
Sbjct: 62  NFSSLKLNVYEEIKLRIRA---EKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVI 118

Query: 836 NFKGGYLNDPM--------------------RFDVSDGGALELNVTGLQPDTIYTIQVAA 875
           +   G  +  M                      +  +       +  L P+T Y ++V A
Sbjct: 119 HISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKA 178

Query: 876 LTRKGD--GDRSKPETIKTPGGVPNRP 900
                   G  S    IKT       P
Sbjct: 179 ALLTSWKIGVYSPVHCIKTTVENELPP 205

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 127

 Score = 73.0 bits (179), Expect = 2e-15
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 13/115 (11%)

Query: 197 LLTLPVAP-LDVKISEVTATSVRLDWTYPSET-LLYYVIQYKPKAANTPYSE-------- 246
            LT P  P +  ++   +  ++ + W    E  +  Y +QY        +          
Sbjct: 12  YLTAPNPPSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSW 71

Query: 247 --ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPR 299
             +  I   +YTV  L   T Y F + A+N  G    S P  + T      + P 
Sbjct: 72  MIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAG-SRNSEPTRLKTNSQPFKSGPS 125

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 127

 Score = 56.8 bits (137), Expect = 6e-10
 Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 6/109 (5%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQ-----FVETGRSDSEASIV 769
            P  P         S  +I + W        + + + Y +      F+    S     IV
Sbjct: 15  APNPPSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIV 74

Query: 770 TLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE 818
               Q  + +  L+  T Y   V A    G   S  P  ++T+      
Sbjct: 75  PNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSE-PTRLKTNSQPFKS 122

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 127

 Score = 50.7 bits (121), Expect = 1e-07
 Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 11/104 (10%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQD------QSLPMSAWETQV 534
           P       ++   S  T+ + W   +     I+ Y++ YT         SL  S     +
Sbjct: 16  PNPPSIREELCTASHDTITVHWISDD--EFSISSYELQYTIFTGQANFISLYNSVDSWMI 73

Query: 535 VDNNQLT--TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           V N +    T+  L   T Y   V+A    G    S P  +KT 
Sbjct: 74  VPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRN-SEPTRLKTN 116

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} Length = 317

 Score = 76.8 bits (188), Expect = 3e-15
 Identities = 39/320 (12%), Positives = 85/320 (26%), Gaps = 56/320 (17%)

Query: 485 PRDVQVRPLSSSTMVIQWDEPE--TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           P +  ++    + +++QW              Y+V     +      +ET+     +   
Sbjct: 15  PVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDD---YETR---ITESKA 68

Query: 543 ISDLTPHTIYTIRVQAFT--SVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAW 600
           ++ L      ++R       S+     ++  L        +   +L              
Sbjct: 69  VTILHMGFSASVRTILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCT----------- 117

Query: 601 SKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWND 660
                              T     +   +   + ++   W   T + E+   Y LY+  
Sbjct: 118 -------------------TNTTEDNYSRLRSYQVSLHCTWMVGTDAPEDT-QYFLYYRY 157

Query: 661 T--------YAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
                    Y+     R I      +           + +   S                
Sbjct: 158 GSWTEECQEYSMDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHS-AIRPFDQLFALH 216

Query: 713 QYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK 772
                 PP NV+ E    T + I WE P       H   Y+++      +     +   K
Sbjct: 217 AIDQINPPLNVTAEI-EGTRMSIQWEKPV-SAFPIHCFDYEVKI----HNTRNGYLQIEK 270

Query: 773 NQTSFVLDELKKWTEYRIWV 792
             T+  +  +   ++Y + V
Sbjct: 271 LMTNAFISIIDDLSKYDVQV 290

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} Length = 317

 Score = 48.7 bits (115), Expect = 4e-06
 Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 713 QYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK 772
           + +   PP N + +      + + W+P P +      + Y+++       D E      +
Sbjct: 8   EKISLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYET-----R 62

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSY 805
              S  +  L       +  +         SS+
Sbjct: 63  ITESKAVTILHMGFSASVRTILQNDHSLLASSW 95

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} Length = 317

 Score = 45.6 bits (107), Expect = 4e-05
 Identities = 29/285 (10%), Positives = 66/285 (23%), Gaps = 31/285 (10%)

Query: 298 PRDVQVRPLSSSTMVIQWDEPETPNG---------QITAKHHRRIGLVETYSLTGLYPNT 348
           P +  ++    + +++QW                 +I A          T S      + 
Sbjct: 15  PVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRITESKAVTILHM 74

Query: 349 LYYIWLAAQSPRGEGAT--------------TPPIPVRTKQYGKTPGFGEQAAKHHRRIG 394
            +   +                         +P   +              +     ++ 
Sbjct: 75  GFSASVRTILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVS 134

Query: 395 LVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYY 454
           L  T+ +    P    Y          E      +    +                    
Sbjct: 135 LHCTWMVGTDAPEDTQYFLYYRYGSWTEECQEYSMDTLGRNIACWFPRTFILSKGRDWLA 194

Query: 455 IWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETP-NGQIT 513
           + +   S                  +    P +V       + M IQW++P +       
Sbjct: 195 VLVNGSSKHS-AIRPFDQLFALHAIDQINPPLNVTAEI-EGTRMSIQWEKPVSAFPIHCF 252

Query: 514 GYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQA 558
            Y+V     ++        Q+        IS +   + Y ++V+A
Sbjct: 253 DYEVKIHNTRN-----GYLQIEKLMTNAFISIIDDLSKYDVQVRA 292

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 71.1 bits (174), Expect = 5e-15
 Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 8/105 (7%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSE----TLLYYVIQYKPKAANTP---YSEISGIITT 253
              P    + +VT  S+ L W    +          +++  +  +     Y  I     T
Sbjct: 16  LSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYAT 75

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGETEPGTA 297
            + V  L P T Y+F +   +  G    S   +V TT E+ P + 
Sbjct: 76  RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESGPSSG 120

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 60.0 bits (145), Expect = 4e-11
 Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 2/112 (1%)

Query: 471 PIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYT-QDQSLPMS 528
              +   +  P + P    V  ++  ++ + WD  +    Q      + ++ +++   M 
Sbjct: 5   SSGMEPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMH 64

Query: 529 AWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
           ++            +  L P T+Y  R++  +  G    S  V V T +   
Sbjct: 65  SYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESG 116

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 53.8 bits (129), Expect = 6e-09
 Identities = 17/112 (15%), Positives = 41/112 (36%), Gaps = 1/112 (0%)

Query: 706 PIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE 765
              +   + VP + P       ++  SI + W+    E+  G    +    +E       
Sbjct: 5   SSGMEPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMH 64

Query: 766 A-SIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
           +  ++     T  V++ L+  T Y+  +   +  G+   S  +++ T  +  
Sbjct: 65  SYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESG 116

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 51.1 bits (122), Expect = 6e-08
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 8/106 (7%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSG-----ENIISYELYWNDTYAKAKHHRRIGLVET 676
           +KP       +   ++ L W            E  + + +   D    +      G    
Sbjct: 17  SKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATR 76

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
           + + GL P TLY   L   SP GE   +P + V T +    + P +
Sbjct: 77  HVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTR---ESGPSS 119

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 17/111 (15%)

Query: 282 SSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRI-------- 333
           S  + +   +  P + P    V  ++  ++ + WD  +    Q   +   R         
Sbjct: 3   SGSSGMEPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPK 62

Query: 334 ---------GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                    G    + + GL P TLY   L   SP GE   +P + V T +
Sbjct: 63  MHSYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTR 113

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 70.4 bits (173), Expect = 8e-15
 Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYS-EISGIITTYY 255
              P       +T  +V L W  P  T    +  Y+++ +            S I+   +
Sbjct: 11  IDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEF 70

Query: 256 TVRNLSPYTEYEFYIIAVNNLGR-GPPSSP-AVITTGE 291
           TV  L+    YEF +IA N  G   PPS P   IT  +
Sbjct: 71  TVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRD 108

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 54.3 bits (131), Expect = 3e-09
 Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 10/102 (9%)

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNN 538
            P   P       ++  T+ ++W +PE   G +IT Y V     + LP   W      N 
Sbjct: 9   SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEK---RDLPNGRWLKANFSNI 65

Query: 539 QLT--TISDLTPHTIYTIRVQAFTSVG----PGPLSAPVLVK 574
                T+S LT    Y  RV A  + G    P   S  +  +
Sbjct: 66  LENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCR 107

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 51.2 bits (123), Expect = 5e-08
 Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 9/105 (8%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFVETGRSDSEASIVTLKN 773
           P  PP       ++  ++ + W  P      G   I  Y ++  +        +  +   
Sbjct: 10  PIDPPGKPVPLNITRHTVTLKWAKP---EYTGGFKITSYIVEKRDLPNGRWLKANFSNIL 66

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGDG----PSSYPITIRTHED 814
           +  F +  L +   Y   V+A  + G        S  IT R   +
Sbjct: 67  ENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVE 111

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 110

 Score = 70.1 bits (172), Expect = 1e-14
 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 9/103 (8%)

Query: 201 PVAPLDVKI-SEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITTYY 255
           P   L  ++     A  ++L W  P       +  Y ++  P   + P  E+        
Sbjct: 9   PGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEP-REVYQGSEVEC 67

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAP 298
           TV +L P   Y F + A N +G GP S    IT   T PG+ P
Sbjct: 68  TVSSLLPGKTYSFRLRAANKMGFGPFSEKCDIT---TAPGSGP 107

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 110

 Score = 60.0 bits (146), Expect = 4e-11
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 15/118 (12%)

Query: 466 GATTPPIPVRTKQYEPGTAPRDVQVRPLSSST-MVIQWDEPETPNGQ-ITGYKVYYTQDQ 523
           G++    P       PG      +++    +  + ++W  P    G  I+ Y V  +  +
Sbjct: 1   GSSGSSGP-------PG-PCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIE 52

Query: 524 SLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
                    +V   +++  T+S L P   Y+ R++A   +G GP S    + T  G  
Sbjct: 53  K----DEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGSG 106

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 110

 Score = 56.6 bits (137), Expect = 6e-10
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 16/119 (13%)

Query: 701 GATTPPIPVRTKQYVPGAP-PQNVSCEPLSSTSIRISWEPPPVERSNGH--IVYYKLQFV 757
           G++    P       PG   P  +   P  +  I++ W PP     +G   I  Y ++  
Sbjct: 1   GSSGSSGP-------PGPCLPPRLQGRP-KAKEIQLRWGPP---LVDGGSPISCYSVEMS 49

Query: 758 ETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
                  E   V   ++    +  L     Y   + A   +G GP S    I T     
Sbjct: 50  PIE--KDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGSG 106

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 110

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKT-PGGVP 897
           V  G  +E  V+ L P   Y+ ++ A  + G G  S+   I T PG  P
Sbjct: 59  VYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGSGP 107

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 110

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 5/101 (4%)

Query: 624 PRDLRAVD-IQETAVTLAWSKPTHSGEN-IISYELYWNDTYAKAKHHRRIGLVETYSLTG 681
               R     +   + L W  P   G + I  Y +  +            G     +++ 
Sbjct: 12  CLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSS 71

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
           L P   Y   L A +  G G  +    + T    PG+ P +
Sbjct: 72  LLPGKTYSFRLRAANKMGFGPFSEKCDITTA---PGSGPSS 109

>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} Length = 108

 Score = 68.5 bits (168), Expect = 3e-14
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRNVL 160
           RV P             +   + +SC A G+P P + W K  + +       L  G   L
Sbjct: 8   RVAPTI-TGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNL 66

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           T+ RV + +   YTC A SVLG  +      ++
Sbjct: 67  TIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIE 99

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} Length = 488

 Score = 75.4 bits (184), Expect = 3e-14
 Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 15/203 (7%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGEN---IISYELYWNDTYAKAKHHRRIGLVETYS 678
             P+ L         +  +W+    +G        Y L+ + +   A  HR  GL     
Sbjct: 288 DVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNETY 347

Query: 679 ---LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRI 735
              +       ++   L  ++P G+      + +   + V    P ++  + ++ST +  
Sbjct: 348 RLGVQMHPGQEIHNFTLTGRNPLGQ--AQSAVVINVTERVAPHDPTSLKVKDINSTVVTF 405

Query: 736 SWEPPPVERSNGHIVYYKLQFVETGRSDSEAS---IVTLKNQTSFVLDELKKWTEYRIWV 792
           SW  P         +  +++  +        +        +     +D+L  +T Y   V
Sbjct: 406 SWYLPG--NFTKINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRV 463

Query: 793 LAGTSIGDGPS--SYPITIRTHE 813
              +      S  S      T E
Sbjct: 464 RCSSKTFWKWSRWSDEKRHLTTE 486

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} Length = 488

 Score = 65.8 bits (159), Expect = 3e-11
 Identities = 62/449 (13%), Positives = 125/449 (27%), Gaps = 64/449 (14%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
                D+K +          W  P       +  +       +  P         T   +
Sbjct: 4   DDDDKDLKCTTNNMRVWDCTWPAPLGVSPGTVKDICIKDRFHSCHPLET------TNVKI 57

Query: 258 RNLSPYTEYEFYIIAVNNLG-RGPPSSPAVITTGETEPGTAPRDVQVRPLSS-STMVIQW 315
             LSP  ++E  I  +N    +   +   V       P T P  + +      S+++++W
Sbjct: 58  PALSP-GDHEVTINYLNGFQSKFTLNEKDVSLI----PET-PEILDLSADFFTSSLLLKW 111

Query: 316 DEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
           ++  +                 T+ +  L       + L   +      T        + 
Sbjct: 112 NDRGSALPH---------PSNATWEIKVLQNPRTEPVALVLLN------TMLSGKDTVQH 156

Query: 376 YGKTPGFGEQAAKHHRRI-GLVETYSLTGLYPNTLY-YIWLAAQSPRGEGATTPPIPV-- 431
           +  T     Q A H   I   +++   +G    + +  +   +     E    P   V  
Sbjct: 157 WNWTSDLPLQCATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVFPQDKVVL 216

Query: 432 ---------------RTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEG-------ATT 469
                           + Q G T       LY  T+    L        G          
Sbjct: 217 AGSNMTICCMSPTKVLSGQIGNTLRPLIH-LYGQTVAIHILNIPVSENSGTNIIFITDDD 275

Query: 470 PPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN---GQITGYKVYYTQDQSLP 526
               V    Y P   P+ +         ++  W+          + T Y ++ +      
Sbjct: 276 VYGTVVFAGYPPD-VPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSA 334

Query: 527 MSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDL 586
           +      + +      +       I+   +     +G    SA V+  T++  P  P  L
Sbjct: 335 VFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQ-SAVVINVTERVAPHDPTSL 393

Query: 587 RAVDIQETAVTLAWSKPTHSGENIISYEL 615
           +  DI  T VT +W  P +  +  +  ++
Sbjct: 394 KVKDINSTVVTFSWYLPGNFTKINLLCQI 422

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} Length = 488

 Score = 64.6 bits (156), Expect = 7e-11
 Identities = 37/288 (12%), Positives = 78/288 (27%), Gaps = 42/288 (14%)

Query: 99  PVRRVPPQFSIPP---PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV 155
           P++ +    +      P    V+  S + + C++    +        + +       + +
Sbjct: 194 PLKNISWIRNTETNVFPQDKVVLAGSNMTICCMSPTKVLSGQIGNTLRPLIHLYGQTVAI 253

Query: 156 GRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTAT 215
               + +   + +         V G +  +               P  P  +        
Sbjct: 254 HILNIPVSENSGTNIIFITDDDVYGTVVFAGYP------------PDVPQKLSCETHDLK 301

Query: 216 SVRLDWTYPSETLLY------YVIQYKPKAANTPYSEISGII--TTYYTVRNLSPYTEYE 267
            +   W     T L       Y +       +  +  I G+   T    V+       + 
Sbjct: 302 EIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHN 361

Query: 268 FYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI-- 325
           F +   N LG+    S  VI   E      P  ++V+ ++S+ +   W  P         
Sbjct: 362 FTLTGRNPLGQ--AQSAVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLL 419

Query: 326 -----------TAKHHRRIGLVET----YSLTGLYPNTLYYIWLAAQS 358
                          +  I   E      ++  L P T Y   +   S
Sbjct: 420 CQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS 467

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} Length = 488

 Score = 61.9 bits (149), Expect = 5e-10
 Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 6/136 (4%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE 504
           Q      ++   L  ++P G+      + +   +      P  ++V+ ++S+ +   W  
Sbjct: 352 QMHPGQEIHNFTLTGRNPLGQ--AQSAVVINVTERVAPHDPTSLKVKDINSTVVTFSWYL 409

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT--TISDLTPHTIYTIRVQAFT-- 560
           P          ++   +  S       T     +      +  L P+T YT RV+  +  
Sbjct: 410 PGNFTKINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSSKT 469

Query: 561 SVGPGPLSAPVLVKTQ 576
                  S      T 
Sbjct: 470 FWKWSRWSDEKRHLTT 485

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} Length = 488

 Score = 58.0 bits (139), Expect = 7e-09
 Identities = 36/207 (17%), Positives = 58/207 (28%), Gaps = 23/207 (11%)

Query: 709 VRTKQYVPGAPPQNVSCEPLSSTSIRISWEPP-PVERSNGHIVYYKLQFVETGRSDSEAS 767
           V    Y P   PQ +SCE      I  SW P             Y L    +G+S     
Sbjct: 280 VVFAGYPPD-VPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHR 338

Query: 768 IVTLKNQTSFV-LDELKKWTEYRIWVLAGTSIGDGPSSYPITI--RTHEDDPSEVCPTQN 824
           I  L N+T  + +        +   +     +G   S+  I +  R    DP+ +     
Sbjct: 339 IEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVINVTERVAPHDPTSLKVKDI 398

Query: 825 DFRK-----NKKTNGSNFKGGYL-----------NDPMRFDVSDGGALELNVTGLQPDTI 868
           +            N +                          ++     + V  L P T 
Sbjct: 399 NSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTA 458

Query: 869 YTIQVAALTRKGD--GDRSKPETIKTP 893
           YT +V   ++        S  +   T 
Sbjct: 459 YTFRVRCSSKTFWKWSRWSDEKRHLTT 485

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} Length = 488

 Score = 46.9 bits (110), Expect = 2e-05
 Identities = 22/197 (11%), Positives = 56/197 (28%), Gaps = 20/197 (10%)

Query: 621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLT 680
               +DL+            W  P       +      +       H           + 
Sbjct: 4   DDDDKDLKCTTNNMRVWDCTWPAPLGVSPGTV-----KDICIKDRFHSCHPLETTNVKIP 58

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTS-IRISWEP 739
            L P           +      +   +  +    +P   P+ +       TS + + W  
Sbjct: 59  ALSPGDHEVTI----NYLNGFQSKFTLNEKDVSLIPE-TPEILDLSADFFTSSLLLKWND 113

Query: 740 PPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIG 799
                 +     ++++ ++  R++  A ++   N      D ++ W          + + 
Sbjct: 114 RGSALPHPSNATWEIKVLQNPRTEPVALVLL--NTMLSGKDTVQHWN-------WTSDLP 164

Query: 800 DGPSSYPITIRTHEDDP 816
              +++ ++IR H D P
Sbjct: 165 LQCATHSVSIRWHIDSP 181

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens} Length = 201

 Score = 71.1 bits (174), Expect = 4e-14
 Identities = 18/118 (15%), Positives = 43/118 (36%), Gaps = 4/118 (3%)

Query: 76  ARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP 135
               + +     +    +       +  P    +    +   ++   + L C A+G+P+P
Sbjct: 85  VSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDV-YALMGQNVTLECFALGNPVP 143

Query: 136 FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            ++WRK     +    ++     VL +  +   +   Y C A ++ G  +    + VQ
Sbjct: 144 DIRWRKV-LEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens} Length = 201

 Score = 41.0 bits (96), Expect = 7e-04
 Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 11/124 (8%)

Query: 107 FSIPPPALLEVMLDSPLNLSCVAVGSPMP--FVKWRK-GQNIELTPDDK--LPVGRNVLT 161
           F       + V     + L C            +W      + +T D +  +      L 
Sbjct: 10  FPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLY 69

Query: 162 LDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP-LDVKISEVTA---T 215
           +  V  S+  NY+C  +S        +            T P    + V+  +V A    
Sbjct: 70  IANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQ 129

Query: 216 SVRL 219
           +V L
Sbjct: 130 NVTL 133

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 221

 Score = 71.0 bits (173), Expect = 6e-14
 Identities = 29/210 (13%), Positives = 53/210 (25%), Gaps = 14/210 (6%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW-----NDTYAKAKHHRRIGLVET 676
            KP ++           L W+ P       ++Y + +          K++          
Sbjct: 10  PKPANIT-FLSINMKNVLQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCD 68

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRIS 736
            S         YY  + A                        PP+        S S+ ++
Sbjct: 69  LSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLT 128

Query: 737 WEPPPVERSNGHIVYYKLQF------VETGRSDSEASIVTLKNQTSFVLDELKKWTEYRI 790
                        V  +  +      V    + S  +        + VL  L+  T Y +
Sbjct: 129 APEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQCVTNHTLVLTWLEPNTLYCV 188

Query: 791 WVLAGTSIGDGPS--SYPITIRTHEDDPSE 818
            V +        +  S     RT +D  S 
Sbjct: 189 HVESFVPGPPRRAQPSEKQCARTLKDQSSI 218

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 221

 Score = 56.4 bits (135), Expect = 6e-09
 Identities = 38/235 (16%), Positives = 67/235 (28%), Gaps = 41/235 (17%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P ++    ++    V+QW  PE   G    Y V Y          W  +    N   T 
Sbjct: 11  KPANITFLSINMKN-VLQWTPPEGLQGVKVTYTVQY---FIYGQKKWLNKSECRNINRTY 66

Query: 544 SDLT-----PHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTL 598
            DL+         Y  RV+A         +              P ++  +   E ++++
Sbjct: 67  CDLSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLETQIGPPEVA-LTTDEKSISV 125

Query: 599 AWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 658
             + P     N     +     Y                            + + Y +  
Sbjct: 126 VLTAPEKWKRNPEDLPVSMQQIY----------------------------SNLKYNVSV 157

Query: 659 NDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR--GEGATTPPIPVRT 711
            +T +     + +    T  LT L PNTLY + + +  P        +     RT
Sbjct: 158 LNTKSNRTWSQCVT-NHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCART 211

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 221

 Score = 51.0 bits (121), Expect = 4e-07
 Identities = 26/152 (17%), Positives = 42/152 (27%), Gaps = 21/152 (13%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
                 YY  + A                    E    P +V +     S  V     PE
Sbjct: 74  SDYEHQYYARVRAIWGTKCSKWAESGRFYPFL-ETQIGPPEVALTTDEKSISV-VLTAPE 131

Query: 507 TPNGQITG-------------YKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT 553
                                Y V     +S   +   +Q V N+ L  ++ L P+T+Y 
Sbjct: 132 KWKRNPEDLPVSMQQIYSNLKYNVSVLNTKS---NRTWSQCVTNHTLV-LTWLEPNTLYC 187

Query: 554 IRVQAFTSV--GPGPLSAPVLVKTQQGVPSQP 583
           + V++F          S     +T +   S  
Sbjct: 188 VHVESFVPGPPRRAQPSEKQCARTLKDQSSIE 219

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 221

 Score = 45.6 bits (107), Expect = 3e-05
 Identities = 33/202 (16%), Positives = 54/202 (26%), Gaps = 32/202 (15%)

Query: 203 APLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANT--PYSEISGIITTY--Y 255
            P ++    +      L WT P       + Y +QY           SE   I  TY   
Sbjct: 11  KPANITFLSIN-MKNVLQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDL 69

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQW 315
           +        +Y   + A+        +               P         S ++V+  
Sbjct: 70  SAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLTA 129

Query: 316 DEPETPNGQITAKHHRRIGLVETYS----------------------LTGLYPNTLYYIW 353
            E    N +      ++I     Y+                      LT L PNTLY + 
Sbjct: 130 PEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQCVTNHTLVLTWLEPNTLYCVH 189

Query: 354 LAAQSPR--GEGATTPPIPVRT 373
           + +  P        +     RT
Sbjct: 190 VESFVPGPPRRAQPSEKQCART 211

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 221

 Score = 45.6 bits (107), Expect = 3e-05
 Identities = 28/206 (13%), Positives = 55/206 (26%), Gaps = 33/206 (16%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD---SEASIVTLKNQ 774
             P N++   ++  ++ + W PP      G  V Y +Q+   G+             +  
Sbjct: 10  PKPANITFLSINMKNV-LQWTPPE--GLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTY 66

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED-------------------- 814
                +      +Y   V A         +         +                    
Sbjct: 67  CDLSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVV 126

Query: 815 --DPSEVCPTQNDFRKNKKTNGSNFK---GGYLNDPMRFDVSDGGALELNVTGLQPDTIY 869
              P +      D   + +   SN K           R          L +T L+P+T+Y
Sbjct: 127 LTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQCVTNHTLVLTWLEPNTLY 186

Query: 870 TIQVAALT--RKGDGDRSKPETIKTP 893
            + V +           S+ +  +T 
Sbjct: 187 CVHVESFVPGPPRRAQPSEKQCARTL 212

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A Length = 227

 Score = 70.5 bits (172), Expect = 1e-13
 Identities = 44/262 (16%), Positives = 72/262 (27%), Gaps = 45/262 (17%)

Query: 563 GPGPLSAPVLVKTQQGV-PSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY 621
            P P   P        +    P +L     +   +   W +   +G     Y   +    
Sbjct: 3   FPPPNPDPKFESKAALLAARGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSY---- 58

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTG 681
                                      E      L+   T   A          +     
Sbjct: 59  -----------------------QLEDEPWKLCRLHQAPTARGAVRF-----WCSLPTAD 90

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTS-IRISWEPP 740
                   + + A S    GA      +   + V    P  +       +  + + W PP
Sbjct: 91  TSSFVPLELRVTAAS----GAPRYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPP 146

Query: 741 PVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWV---LAGTS 797
           P      HI Y ++       + S   +  L+ +T  VL  L+  T Y   V   +A  S
Sbjct: 147 PETPMTSHIRY-EVDVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRARMAEPS 205

Query: 798 IGDGPS--SYPITIRTHED-DP 816
            G   S  S P+++ T  D DP
Sbjct: 206 FGGFWSEWSEPVSLLTPSDLDP 227

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A Length = 227

 Score = 57.0 bits (137), Expect = 4e-09
 Identities = 28/221 (12%), Positives = 56/221 (25%), Gaps = 30/221 (13%)

Query: 702 ATTPPIPVRTKQ-YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG 760
              P     +K   +    P+ + C       +   WE      +      Y   +    
Sbjct: 5   PPNPDPKFESKAALLAARGPEELLCFTERLEDLVCFWEEA--ASAGVGPGQYSFSYQLED 62

Query: 761 RSDSEASIV-------TLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
                  +         ++   S    +   +    + V A +          I      
Sbjct: 63  EPWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELRVTAASGAPRYHRVIHINEVVLL 122

Query: 814 DDPSEVCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDV---------------SDGGALEL 858
           D P  +     D   +            +   +R++V                  G  E 
Sbjct: 123 DAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRTEC 182

Query: 859 NVTGLQPDTIYTIQVAALTRKGD-----GDRSKPETIKTPG 894
            ++ L+  T YT  V A   +        + S+P ++ TP 
Sbjct: 183 VLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTPS 223

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A Length = 227

 Score = 54.7 bits (131), Expect = 2e-08
 Identities = 25/157 (15%), Positives = 42/157 (26%), Gaps = 13/157 (8%)

Query: 469 TPPIPVRTKQYE--PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLP 526
             P P    +        P ++         +V  W+E  +       Y   Y  +    
Sbjct: 6   PNPDPKFESKAALLAARGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLEDEPW 65

Query: 527 MSAWETQVVDNNQLTTIS------DLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
                 Q                 D +      +RV A +          V+   +  + 
Sbjct: 66  KLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELRVTAASGAP---RYHRVIHINEVVLL 122

Query: 581 SQPRDLRAVDIQET-AVTLAWSKPTHSG-ENIISYEL 615
             P  L A    E+  V L W  P  +   + I YE+
Sbjct: 123 DAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEV 159

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A Length = 227

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 408 TLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGA 467
           +  Y  L  +  +       P      ++  +               + + A S    GA
Sbjct: 55  SFSY-QLEDEPWKLCRLHQAPTARGAVRFWCS--LPTADTSSFVPLELRVTAAS----GA 107

Query: 468 TTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMV-IQWDEP-ETPNGQITGYKVYYTQDQSL 525
                 +   +     AP  +  R    S  V ++W  P ETP      Y+V  +  Q  
Sbjct: 108 PRYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQG- 166

Query: 526 PMSAWETQVVDNNQLTTISDLTPHTIYTIRVQA 558
             S    ++++      +S+L   T YT  V+A
Sbjct: 167 AGSVQRVEILEGRTECVLSNLRGRTRYTFAVRA 199

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 66.9 bits (163), Expect = 2e-13
 Identities = 14/104 (13%), Positives = 35/104 (33%), Gaps = 9/104 (8%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGII--------- 251
                 + +++VT +S+RL+W  P      +++++   + +T       ++         
Sbjct: 9   RPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGT 68

Query: 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPG 295
                +R+L   T Y   +  +    +         T      G
Sbjct: 69  RHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGPSSG 112

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 48.0 bits (114), Expect = 6e-07
 Identities = 16/109 (14%), Positives = 35/109 (32%), Gaps = 11/109 (10%)

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYT-------QDQSLPMSAWET 532
                   + V  +++S++ + W+ P    G    + + +        +    P+   E 
Sbjct: 7   GSRPRLSQLSVTDVTTSSLRLNWEAPP---GAFDSFLLRFGVPSPSTLEPHPRPLLQREL 63

Query: 533 QVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581
            V        + DL   T+Y++ +           S     +T  G  S
Sbjct: 64  MVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKAD-SIQGTARTLSGPSS 111

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 45.4 bits (107), Expect = 5e-06
 Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 14/122 (11%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++   P              +S   ++++S+R++WE PP    +  + +       
Sbjct: 1   GSSGSSGSRP----------RLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPST 50

Query: 759 TGRSDSEASIVTLK---NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDD 815
                       L     + S VL +L+  T Y + +          S    T RT    
Sbjct: 51  LEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQ-GTARTLSGP 109

Query: 816 PS 817
            S
Sbjct: 110 SS 111

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 13/99 (13%)

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGEN-IISYELYWNDTYAKAKHHRRI------GLVE 675
           +   L   D+  +++ L W  P  + ++ ++ + +    T                G   
Sbjct: 11  RLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRH 70

Query: 676 TYSLTGLYPNTLYYIWLAAQSPRGEG------ATTPPIP 708
           +  L  L   TLY + L       +       A T   P
Sbjct: 71  SAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 38.8 bits (90), Expect = 9e-04
 Identities = 15/108 (13%), Positives = 31/108 (28%), Gaps = 25/108 (23%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-------------------ITAK 328
           ++G +        + V  +++S++ + W+ P                         +  +
Sbjct: 2   SSGSSGSRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQR 61

Query: 329 HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG------ATTPPIP 370
                G   +  L  L   TLY + L       +       A T   P
Sbjct: 62  ELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} Length = 206

 Score = 69.3 bits (169), Expect = 2e-13
 Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 19/190 (10%)

Query: 630 VDIQETAVTLAWS--KPTHSGENIISYELYWNDTYAKAKH-----------HRRIGLVET 676
            D   T +T  WS        E+ +    + +  Y                + +      
Sbjct: 11  TDGYLTKMTCRWSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYE 70

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTS-IRI 735
                ++  + Y +W+      G    +PP  V     V   PP +V  E   +   ++I
Sbjct: 71  CIFQPIFLLSGYTMWIRINHSLGS-LDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKI 129

Query: 736 SWEPPPVERSNGHIVYYKLQF-VETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLA 794
           SWE P       + + +++++ +       +   V      S  L        Y + V  
Sbjct: 130 SWEKPV---FPENNLQFQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRC 186

Query: 795 GTSIGDGPSS 804
               G G  S
Sbjct: 187 KRLDGLGYWS 196

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} Length = 206

 Score = 60.9 bits (147), Expect = 1e-10
 Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 7/127 (5%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMV-IQWD 503
           Q ++  + Y +W+      G    +PP  V          P  V+     +  ++ I W+
Sbjct: 74  QPIFLLSGYTMWIRINHSLGS-LDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWE 132

Query: 504 EPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT--TISDLTPHTIYTIRVQAFTS 561
           +P  P   +  +++ Y          W+   V + +    ++       +Y ++V+    
Sbjct: 133 KPVFPENNLQ-FQIRYGLSGK--EVQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRL 189

Query: 562 VGPGPLS 568
            G G  S
Sbjct: 190 DGLGYWS 196

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} Length = 206

 Score = 56.6 bits (136), Expect = 4e-09
 Identities = 26/194 (13%), Positives = 53/194 (27%), Gaps = 33/194 (17%)

Query: 719 PPQNVSCE-PLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ--- 774
              N+SCE     T +   W    +   +      +L++  +    S+   +   ++   
Sbjct: 3   VNINISCETDGYLTKMTCRWSTSTI--QSLAESTLQLRYHRSSLYCSDIPSIHPISEPKD 60

Query: 775 --------TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED---DPSE---VC 820
                      +   +   + Y +W+    S+G    S P  +         P       
Sbjct: 61  CYLQSDGFYECIFQPIFLLSGYTMWIRINHSLGSL-DSPPTCVLPDSVVKPLPPSSVKAE 119

Query: 821 PTQNDFRKNKKTNGSNFKGGYL------------NDPMRFDVSDGGALELNVTGLQPDTI 868
            T N            F    L                 ++V D  +  +++       +
Sbjct: 120 ITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAV 179

Query: 869 YTIQVAALTRKGDG 882
           Y +QV      G G
Sbjct: 180 YAVQVRCKRLDGLG 193

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} Length = 206

 Score = 50.5 bits (120), Expect = 5e-07
 Identities = 22/191 (11%), Positives = 53/191 (27%), Gaps = 32/191 (16%)

Query: 204 PLDVK-ISEVTATSVRLDWTYPSETLL---YYVIQYKPKAANTPYSE------------I 247
            +++   ++   T +   W+  +   L      ++Y   +                   +
Sbjct: 4   NINISCETDGYLTKMTCRWSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYL 63

Query: 248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLS 307
                     + +   + Y  +I   ++LG    S P  +          P  V+     
Sbjct: 64  QSDGFYECIFQPIFLLSGYTMWIRINHSLGSL-DSPPTCVLPDSVVKPLPPSSVKAEITI 122

Query: 308 SSTMV-IQWDEPETPNGQIT-------------AKHHRRIGLVET-YSLTGLYPNTLYYI 352
           +  ++ I W++P  P   +               K +          SL       +Y +
Sbjct: 123 NIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAVYAV 182

Query: 353 WLAAQSPRGEG 363
            +  +   G G
Sbjct: 183 QVRCKRLDGLG 193

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} Length = 206

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 17/96 (17%), Positives = 29/96 (30%), Gaps = 7/96 (7%)

Query: 201 PVAPLDVKISEVTATS-VRLDWTYPS--ETLLYYVIQYKPKAANTPYS--EISGIITTYY 255
           P+ P  VK         +++ W  P   E  L + I+Y        +   E+    +   
Sbjct: 110 PLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEVYDAKSKSV 169

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPS--SPAVITT 289
           ++        Y   +      G G  S  S    T 
Sbjct: 170 SLPVPDLCAVYAVQVRCKRLDGLGYWSNWSNPAYTV 205

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} Length = 206

 Score = 47.0 bits (111), Expect = 6e-06
 Identities = 29/219 (13%), Positives = 65/219 (29%), Gaps = 52/219 (23%)

Query: 495 SSTMVIQWDEPETPNGQITGYKVYY--------TQDQSLPMSAWETQVVDNNQLT--TIS 544
            + M  +W      +   +  ++ Y              P+S  +   + ++        
Sbjct: 15  LTKMTCRWSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQ 74

Query: 545 DLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGV-PSQPRDLRAVDIQET-AVTLAWSK 602
            +   + YT+ ++   S+G    S P  V     V P  P  ++A        + ++W K
Sbjct: 75  PIFLLSGYTMWIRINHSLGSLD-SPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEK 133

Query: 603 PTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY 662
           P    EN + +++ +                           +        YE+Y   + 
Sbjct: 134 P-VFPENNLQFQIRY-------------------------GLSGKEVQWKMYEVYDAKS- 166

Query: 663 AKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG 701
                       ++ SL       +Y + +  +   G G
Sbjct: 167 ------------KSVSLPVPDLCAVYAVQVRCKRLDGLG 193

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} Length = 201

 Score = 69.0 bits (168), Expect = 2e-13
 Identities = 32/207 (15%), Positives = 68/207 (32%), Gaps = 21/207 (10%)

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
            P ++R ++       L W  P  +   + ++   +           +  L E    + L
Sbjct: 4   PPENVR-MNSVNFKNILQWESPAFAKGQL-TFTAQYLSYRIFQDKCMQTTLTE-CDFSSL 60

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPV 742
                + + + A+                   + G P   V    + +  + + +  P +
Sbjct: 61  SKYGDHTLRVRAEFADEHSDWVQITFSPVDDTIIGPPGMQVE---VLADCLHMRFLAPKI 117

Query: 743 E--------RSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLA 794
           E        ++  +   Y +Q+ + G +D +  I         VL  L+ WT Y + V  
Sbjct: 118 ENEYETWTMKNVYNSWTYNVQYWKQG-TDEKFQITP--QYDFEVLRNLEPWTTYCVQVRG 174

Query: 795 GTSIGDGPS--SYPITIRTHEDD--PS 817
                +     S P+  +T  D+  PS
Sbjct: 175 FLPDRNKAGEWSEPVCEQTTHDETVPS 201

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} Length = 201

 Score = 62.8 bits (152), Expect = 2e-11
 Identities = 34/206 (16%), Positives = 63/206 (30%), Gaps = 32/206 (15%)

Query: 200 LPVAPLDVKISEVTATSVRLDWTYPSET--LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           +P  P +V+++ V   ++ L W  P+     L +  QY          +      T    
Sbjct: 2   VP-PPENVRMNSVNFKNI-LQWESPAFAKGQLTFTAQYLSYRIFQD--KCMQTTLTECDF 57

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDE 317
            +LS Y ++   + A                  +T  G  P  +QV  L+    + ++  
Sbjct: 58  SSLSKYGDHTLRVRAEFADEHSDWVQITFSPVDDTIIG--PPGMQVEVLADCLHM-RFLA 114

Query: 318 PETPNGQI---------------------TAKHHRRIGLVETYSLTGLYPNTLYYIWLAA 356
           P+  N                        T +  +     +   L  L P T Y + +  
Sbjct: 115 PKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQITPQYDFEVLRNLEPWTTYCVQVRG 174

Query: 357 QSP--RGEGATTPPIPVRTKQYGKTP 380
             P     G  + P+  +T      P
Sbjct: 175 FLPDRNKAGEWSEPVCEQTTHDETVP 200

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} Length = 201

 Score = 58.6 bits (141), Expect = 8e-10
 Identities = 34/230 (14%), Positives = 64/230 (27%), Gaps = 42/230 (18%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P +V++  ++    ++QW+ P    GQ+T +   Y   +       +T           
Sbjct: 4   PPENVRMNSVNFKN-ILQWESPAFAKGQLT-FTAQYLSYRIFQDKCMQT----TLTECDF 57

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKP 603
           S L+ +  +T+RV+A  +                 +   P     V      +     K 
Sbjct: 58  SSLSKYGDHTLRVRAEFADEHSDWVQITFSPVDDTIIGPPGMQVEVLADCLHMRFLAPKI 117

Query: 604 THSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA 663
            +  E      +Y + TY                                   YW     
Sbjct: 118 ENEYETWTMKNVYNSWTY--------------------------------NVQYWKQGTD 145

Query: 664 KAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP--RGEGATTPPIPVRT 711
           +          +   L  L P T Y + +    P     G  + P+  +T
Sbjct: 146 EKFQITPQY--DFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQT 193

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} Length = 201

 Score = 54.0 bits (129), Expect = 3e-08
 Identities = 28/149 (18%), Positives = 48/149 (32%), Gaps = 21/149 (14%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           L     + + + A+                     G  P  +QV  L+    + ++  P+
Sbjct: 60  LSKYGDHTLRVRAEFADEHSDWVQITFSPVDDTIIG--PPGMQVEVLADCLHM-RFLAPK 116

Query: 507 TPNGQITG----------YKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRV 556
             N   T           Y V Y +  +      + Q+        + +L P T Y ++V
Sbjct: 117 IENEYETWTMKNVYNSWTYNVQYWKQGT----DEKFQITPQYDFEVLRNLEPWTTYCVQV 172

Query: 557 QAFTSV--GPGPLSAPVLVKTQQG--VPS 581
           + F       G  S PV  +T     VPS
Sbjct: 173 RGFLPDRNKAGEWSEPVCEQTTHDETVPS 201

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} Length = 201

 Score = 48.6 bits (115), Expect = 2e-06
 Identities = 31/202 (15%), Positives = 58/202 (28%), Gaps = 34/202 (16%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
           PP+NV    ++  +I + WE P    + G + +      +                T   
Sbjct: 4   PPENVRMNSVNFKNI-LQWESPAF--AKGQLTFT----AQYLSYRIFQDKCMQTTLTECD 56

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNK-------- 830
              L K+ ++ + V A     D  S +     +  DD     P                 
Sbjct: 57  FSSLSKYGDHTLRVRAEF--ADEHSDWVQITFSPVDDTIIGPPGMQVEVLADCLHMRFLA 114

Query: 831 ---KTNGSNFKGGYLNDPMRFDVS------------DGGALELNVTGLQPDTIYTIQVAA 875
              +     +    + +   ++V                     +  L+P T Y +QV  
Sbjct: 115 PKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQITPQYDFEVLRNLEPWTTYCVQVRG 174

Query: 876 --LTRKGDGDRSKPETIKTPGG 895
               R   G+ S+P   +T   
Sbjct: 175 FLPDRNKAGEWSEPVCEQTTHD 196

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A Length = 284

 Score = 70.2 bits (172), Expect = 3e-13
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 9/115 (7%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV--GRN 158
           + PP+F         V  D      C   GSP   V W K    I+ +   ++       
Sbjct: 96  QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVA 155

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
           VL +  ++  +  +YTC A +  G   +ST +KV+    P+      P  V+  +
Sbjct: 156 VLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK--EPPVFRKK--PHPVETLK 206

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A Length = 284

 Score = 65.9 bits (161), Expect = 7e-12
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV--GRNV 159
            PP F + P ++ ++ L       C   G+    + W K  + I    + K+ +      
Sbjct: 4   APPFFDLKPVSV-DLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTAT 62

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           LT+ +VT+ +   YTC A++V G    S  + VQ
Sbjct: 63  LTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQ 96

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A Length = 284

 Score = 65.5 bits (160), Expect = 1e-11
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GR 157
           + PP F   P   +E +  + ++L C   G+P   V W K    EL    K  +      
Sbjct: 190 KEPPVFRKKP-HPVETLKGADVHLECELQGTPPFQVSWHKD-KRELRSGKKYKIMSENFL 247

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             + +  V  ++   Y C A++ +G       + ++
Sbjct: 248 TSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 Length = 182

 Score = 67.9 bits (166), Expect = 3e-13
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 9/93 (9%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRK-GQNIELTPDDKLPVGRNV 159
              P F++ P  L  V  ++P  LSC AVG P P  + W +    I            +V
Sbjct: 96  EGVPFFTVEPKDL-AVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP-----SPSV 149

Query: 160 LTLDRVTESENYTCIAASVLGVIETSTI-VKVQ 191
           L +  VT+S  ++C A ++ G+  + T  V +Q
Sbjct: 150 LNVTGVTQSTMFSCEAHNLKGLASSRTATVHLQ 182

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 Length = 182

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 9/96 (9%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRN---- 158
             +  +  P  L V    P+ L+C   G   P ++W K G  ++      +PV       
Sbjct: 2   GLKL-MGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIG 60

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTI-VKVQ 191
            L+L  V  S+   Y C          +  + + V+
Sbjct: 61  FLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVE 96

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 71.4 bits (175), Expect = 4e-13
 Identities = 16/109 (14%), Positives = 39/109 (35%), Gaps = 2/109 (1%)

Query: 85  RRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN 144
             G     + +    +    P+  +  P  +     + + L C A+G+P+P + WR+   
Sbjct: 185 VLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADG 244

Query: 145 IELTPDDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             +    +      +L +    + +  +Y C+A +  G       +   
Sbjct: 245 KPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFY 293

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 61.8 bits (150), Expect = 4e-10
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 6/94 (6%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRNVLT 161
             P +      +  V ++  +   C A G P P  +W K G    L   D++ + +  L 
Sbjct: 294 AQPNWVQIINDI-HVAMEESVFWECKANGRPKPTYRWLKNGD--PLLTRDRIQIEQGTLN 350

Query: 162 LDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
           +  V  S+   Y C+A +  GVI +S  + V  +
Sbjct: 351 ITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAE 384

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 53.3 bits (128), Expect = 2e-07
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 104 PPQFSIPPPALLEVMLD--SPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRNVL 160
            P F   P  ++  +      + LSC   G+P P ++W+  G ++++  D +  V    L
Sbjct: 5   GPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSL 64

Query: 161 TLDRVTESE---NYTCIAASVLGVIETSTIVKVQCKYAP 196
            ++   +++    Y CIA +  G I  S   K+Q  Y  
Sbjct: 65  LINNPNKTQDAGTYQCIATNSFGTI-VSREAKLQFAYLE 102

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A* Length = 384

 Score = 46.4 bits (110), Expect = 3e-05
 Identities = 15/116 (12%), Positives = 35/116 (30%), Gaps = 5/116 (4%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRN-VL 160
               F     + + V     + L C     S      W   +      + +        L
Sbjct: 100 YLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNL 159

Query: 161 TLDRVTESE--NYTCIAASVLG-VIETSTIVKVQCKYAPLLTLPVAPLDVKISEVT 213
            + +V +S+  NYTC+  + +           +  +   ++      ++V+  E  
Sbjct: 160 YIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETV 215

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 65.2 bits (159), Expect = 4e-13
 Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 3/93 (3%)

Query: 199 TLPV-APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYT 256
           + P+  P  + ++ VT  +V L W  PS    +Y+++  P +      E    +      
Sbjct: 6   SGPLPPPRALTLAAVTPRTVHLTWQ-PSAGATHYLVRCSPASPKGEEEEREVQVGRPEVL 64

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           +  L P  +YE  + ++              T 
Sbjct: 65  LDGLEPGRDYEVSVQSLRGPEGSEARGIRARTP 97

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 65.2 bits (159), Expect = 4e-13
 Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 7/103 (6%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
            P  PP+ ++   ++  ++ ++W+P           +Y ++         E        +
Sbjct: 7   GPLPPPRALTLAAVTPRTVHLTWQPSA------GATHYLVRCSPASPKGEEEEREVQVGR 60

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
              +LD L+   +Y + V +        +   I  RT    PS
Sbjct: 61  PEVLLDGLEPGRDYEVSVQSLRGPEGSEAR-GIRARTPTSGPS 102

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 59.5 bits (144), Expect = 4e-11
 Identities = 21/119 (17%), Positives = 40/119 (33%), Gaps = 18/119 (15%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQ 523
           G   ++ P+P           PR + +  ++  T+ + W          T Y V  +   
Sbjct: 1   GSSGSSGPLP----------PPRALTLAAVTPRTVHLTWQPS----AGATHYLVRCSP-- 44

Query: 524 SLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581
           + P    E + V   +    +  L P   Y + VQ+         +  +  +T    PS
Sbjct: 45  ASPKGEEEEREVQVGRPEVLLDGLEPGRDYEVSVQSLRGPEGSE-ARGIRARTPTSGPS 102

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 13/99 (13%), Positives = 26/99 (26%), Gaps = 7/99 (7%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           PR L    +    V L W     +   ++           + +  +         L GL 
Sbjct: 12  PRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPASPKGEEEEREVQ--VGRPEVLLDGLE 69

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
           P   Y + + +                 +   P + P +
Sbjct: 70  PGRDYEVSVQSLRGPEGSE-----ARGIRARTPTSGPSS 103

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 47.1 bits (112), Expect = 9e-07
 Identities = 16/99 (16%), Positives = 29/99 (29%), Gaps = 16/99 (16%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITAKHHRRIGLVET-------- 338
           ++G + P   PR + +  ++  T+ + W          +        G  E         
Sbjct: 2   SSGSSGPLPPPRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPASPKGEEEEREVQVGRP 61

Query: 339 -YSLTGLYPNTLYYIWLAAQSPRGEG------ATTPPIP 370
              L GL P   Y + + +             A TP   
Sbjct: 62  EVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSG 100

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A Length = 194

 Score = 67.1 bits (164), Expect = 8e-13
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 8/100 (8%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV----GRN 158
            P F+ P  ++  V+  S         G P+P V W + GQ I  +    + +    GR 
Sbjct: 5   APTFTQPLQSV-VVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRA 63

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
            LT+  VT++    Y+  A +  G   ++  + V+ + AP
Sbjct: 64  KLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAP 103

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A Length = 194

 Score = 61.3 bits (149), Expect = 9e-11
 Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 8/97 (8%)

Query: 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----G 156
              PP F +     + V   S + L     G P P VK+ +    E+       +     
Sbjct: 100 ETAPPNF-VQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRD-GAEIQSSLDFQISQEGD 157

Query: 157 RNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
              L +      +   Y+  A + +G   ++  + VQ
Sbjct: 158 LYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 71.0 bits (174), Expect = 9e-13
 Identities = 30/154 (19%), Positives = 54/154 (35%), Gaps = 7/154 (4%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYPSE----TLLYYVIQYKPKAANTPYSEISGIITT 253
           +  P  P    I  +   +V L W  P+      +  Y I+ +     + +S  +    T
Sbjct: 7   VPEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGS-WSPCAKSRYT 65

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPA--VITTGETEPGTAPRDVQVRPLSSSTM 311
           Y T+  L    +YEF IIA N  G+  P  P   V+  G+        DV  +       
Sbjct: 66  YTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGK 125

Query: 312 VIQWDEPETPNGQITAKHHRRIGLVETYSLTGLY 345
                  +     I  +++ +   ++   +   Y
Sbjct: 126 GTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHY 159

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 51.0 bits (122), Expect = 2e-06
 Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 9/153 (5%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPE-TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT- 541
            PR   +  +    +++ W  P       +T Y +   + +     +W +    +     
Sbjct: 12  PPRFPIIENILDEAVILSWKPPALDGGSLVTNYTI---EKREAMGGSW-SPCAKSRYTYT 67

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWS 601
           TI  L     Y  R+ A    G      P       G   + R    VD Q   V     
Sbjct: 68  TIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVR---G 124

Query: 602 KPTHSGENIISYELYWNDTYAKPRDLRAVDIQE 634
           K T S          W   Y +P +++   + +
Sbjct: 125 KGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLD 157

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 48.3 bits (115), Expect = 1e-05
 Identities = 31/127 (24%), Positives = 42/127 (33%), Gaps = 7/127 (5%)

Query: 70  RAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA 129
                  R++  S LR+ R      + A   R       I  P   EV      N  C  
Sbjct: 447 EPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRV 506

Query: 130 VGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRVTESEN--YTCIAASVLGVIE 183
           + S  P V W K  + EL    K           LT++RV   +   YT  A +  G  E
Sbjct: 507 IASSPPVVTWHKD-DRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKE 565

Query: 184 TSTIVKV 190
               + V
Sbjct: 566 EIVFLNV 572

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 47.9 bits (114), Expect = 1e-05
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 3/119 (2%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF 777
            PP+    E +   ++ +SW+PP ++     +  Y ++  E        S       T  
Sbjct: 11  EPPRFPIIENILDEAVILSWKPPALD-GGSLVTNYTIEKREAM--GGSWSPCAKSRYTYT 67

Query: 778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGSN 836
            ++ L+   +Y   ++A    G      P        D  +     +   + K   G  
Sbjct: 68  TIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKG 126

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 70.7 bits (173), Expect = 1e-12
 Identities = 44/261 (16%), Positives = 75/261 (28%), Gaps = 29/261 (11%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN-VL 160
              P           ++    L ++C   G P+  + W +  N  L  + K  V  N  L
Sbjct: 525 YGLPYIRQMEK--KAIVAGETLIVTCPVAGYPIDSIVWERD-NRALPINRKQKVFPNGTL 581

Query: 161 TLDRVTESE---NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSV 217
            ++ V  +     YTC+A +  G     + ++VQ    P +  P A  +          +
Sbjct: 582 IIENVERNSDQATYTCVAKNQEGYSARGS-LEVQVMVLPRII-PFAFEEGPAQV--GQYL 637

Query: 218 RLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYY----TVRNLSPYTEYEFYIIAV 273
            L  + P   L   +       A +    I+           T+  +       F   A 
Sbjct: 638 TLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHAR 697

Query: 274 NNLGRGPPSSPAVITTGETEPGTAPRDVQVRP----------LSSSTMVIQW--DEPETP 321
           N  G    ++P +           P D                      + W     +TP
Sbjct: 698 NLAGHQQFTTP-LNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTP 756

Query: 322 NGQITAKHHRRIGLVETYSLT 342
                 K    I  VE  +L 
Sbjct: 757 GEYKDLKKSDNI-RVEEGTLH 776

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 65.0 bits (158), Expect = 8e-11
 Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 7/114 (6%)

Query: 85  RRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKG-- 142
           R       +         VP   S+    +      S + L C A G P+P  +W K   
Sbjct: 228 RLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIE 287

Query: 143 ---QNIELTPDDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
              +   +  +D++      L +      +   Y C+  + +G     T++ V 
Sbjct: 288 GTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVT 341

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 61.5 bits (149), Expect = 8e-10
 Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 13/103 (12%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
            R  PP           +     + L CVA G+P P + W      ++  +D+  VG+ V
Sbjct: 425 GRFDPPVI-RQAFQEETMEPGPSVFLKCVAGGNPTPEISWELD-GKKIANNDRYQVGQYV 482

Query: 160 ---------LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
                    L +  V  ++   Y CIA S +GV E S  + V 
Sbjct: 483 TVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVY 525

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 61.5 bits (149), Expect = 9e-10
 Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 9/109 (8%)

Query: 91  HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTP 149
           ++ R   +    V P+            +   L L C   G  +P  + W       ++ 
Sbjct: 605 YSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLD-GQAISE 663

Query: 150 DDKLPVGRN-----VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           D  +   R      VLT++ V  S   N+TC A ++ G  + +T + V 
Sbjct: 664 DLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVY 712

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 61.1 bits (148), Expect = 1e-09
 Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 10/96 (10%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTL 162
            P    I PP    V    P   +C   G+P+  V W K           +    +VL +
Sbjct: 342 APLSAKIDPPTQ-TVDFGRPAVFTCQYTGNPIKTVSWMKD-------GKAIGHSESVLRI 393

Query: 163 DRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           + V + +   Y C   +     E S  +K+  ++ P
Sbjct: 394 ESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDP 429

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 58.8 bits (142), Expect = 6e-09
 Identities = 42/232 (18%), Positives = 65/232 (28%), Gaps = 33/232 (14%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK--GQNIELTPDDKLPVGRNVL 160
             P F   P   ++    +   + C A G+PMP + W +  G  +   P  +       L
Sbjct: 37  KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKL 96

Query: 161 TLDRVTESEN--------YTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKI--- 209
                   +         Y C+A +  G I  S  V V+   A      V    V     
Sbjct: 97  VFPPFRAEDYRQEVHAQVYACLARNQFGSI-ISRDVHVRAVVAQYYEADVNKEHVIRGNS 155

Query: 210 --------SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLS 261
                   S V      + W    E   +   +Y  K    P  E+         +R + 
Sbjct: 156 AVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGEL--------HIREVG 207

Query: 262 PY-TEYEFYIIAVNNLGRGPPSSPAVITTGETEP--GTAPRDVQVRPLSSST 310
           P      +     + L      S        TEP     P+ V +      T
Sbjct: 208 PEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKT 259

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster} Length = 816

 Score = 57.3 bits (138), Expect = 2e-08
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 10/99 (10%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK------GQNIELTPDDKLPV 155
            VPP++ + P         S   + C A G P P V W+K      G+  +L   D + V
Sbjct: 712 YVPPRWILEPTDK-AFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV 770

Query: 156 GRNVLTLDRVTESE--NYTCIAASVLGVIETSTI-VKVQ 191
               L +D + ++    Y C A + +G   ++ I + VQ
Sbjct: 771 EEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQ 809

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens} Length = 218

 Score = 67.2 bits (164), Expect = 1e-12
 Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 10/113 (8%)

Query: 91  HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD 150
            + ++  D V     Q  + P +  ++M  S L L CVAVGSP+P  +W K   + LT +
Sbjct: 105 ESFQRSVDGVSESKLQICVEPTSQ-KLMPGSTLVLQCVAVGSPIPHYQWFKN-ELPLTHE 162

Query: 151 DKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLP 201
                 + +  +  V       Y C   +     ++  +  +       L  P
Sbjct: 163 T-----KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII-DELNNLGHP 209

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens} Length = 218

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 12/110 (10%)

Query: 90  AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP 149
           +H     +  +     + ++ P +   V+    + L C A G P    +W K        
Sbjct: 4   SHHHHHHSSGLVPRGSKITVNPESK-AVLAGQFVKLCCRATGHPFVQYQWFKM------- 55

Query: 150 DDKLPVGRN-VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           + ++P G    L  + V   +   Y C   +     E S   ++     P
Sbjct: 56  NKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTF-EFSQWSQLDVCDIP 104

>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 99

 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 97  ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV 155
                 V P FS        V+      L C   G+P+P + W   GQ I+         
Sbjct: 4   GSSGMEVAPSFSSVL-KDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYAR-STCEA 61

Query: 156 GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           G   L +      +   YTC+A + LG +  S  V V 
Sbjct: 62  GVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTVH 99

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 68.7 bits (168), Expect = 2e-12
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 97  ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV 155
           +DP       F +  P+ +  +      L C   G P P   W +  + I+L       +
Sbjct: 214 SDPGLHRQLYF-LQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLL 272

Query: 156 GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           G + L +  VT+ +   YTC+       I  S  + V 
Sbjct: 273 GGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVL 310

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 60.6 bits (147), Expect = 1e-09
 Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN-VL 160
            VPP F   P  L        +   C   G P+P V W K     + P D   +     L
Sbjct: 310 LVPPWFLNHPSNL-YAYESMDIEFECAVSGKPVPTVNWMKN-GDVVIPSDYFQIVGGSNL 367

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            +  V +S+   Y C+A +  G  ++S  + V 
Sbjct: 368 RILGVVKSDEGFYQCVAENEAGNAQSSAQLIVP 400

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 55.6 bits (134), Expect = 4e-08
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 13/119 (10%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDK----LPVGR 157
            P +F     ++    +   + L C  +G PMP + W+K  Q++   P D     LP G 
Sbjct: 120 GPLRFLSQTESI-TAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSG- 177

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETST---IVKVQCKYAPLLTLPVAPLDVKISE 211
             L + R+   +   Y C A +       +     +         L     P +V   E
Sbjct: 178 -ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIE 235

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus} Length = 403

 Score = 50.2 bits (120), Expect = 2e-06
 Identities = 24/120 (20%), Positives = 37/120 (30%), Gaps = 11/120 (9%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRK-GQNIELTPDDKLPVGRN- 158
           R    F   P      M    + L+C A     +P +KW+K G  + L  DD+     N 
Sbjct: 19  RRSLHFVSEPSDA-VTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNG 77

Query: 159 VLTLDRVTESE-------NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
            L +  +  S         Y C A+        S   KV              +   + +
Sbjct: 78  SLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGD 137

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens} Length = 291

 Score = 67.5 bits (165), Expect = 3e-12
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 100 VRRVPPQFSIPP-PALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGR 157
           +  VPP  S+P             +  SC A GSP P + W + G+ IE      L    
Sbjct: 188 IVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN 247

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             LT+  +  S+   Y C A +  G  E    ++V 
Sbjct: 248 TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 283

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens} Length = 291

 Score = 61.0 bits (148), Expect = 4e-10
 Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 7/114 (6%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV-GRNVL 160
               F        E        + C    SP P V W    + +    D++  +   N L
Sbjct: 97  QKLTFREVVSPQ-EFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNL 155

Query: 161 TLDRVTESE--NYTCIAA-SVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
            +  + +S+   Y C       G I+   I+ +     P +++P    +     
Sbjct: 156 QILNINKSDEGIYRCEGRVEARGEIDFRDIIVIV-NVPPAISMPQKSFNATAER 208

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens} Length = 291

 Score = 54.1 bits (130), Expect = 8e-08
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 8/92 (8%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN---- 158
              Q +I    + E+ +      +C A+G P     W   Q  ++    ++ V +     
Sbjct: 3   ALLQVTISLSKV-ELSVGESKFFTCTAIGEPESID-WYNPQGEKIISTQRVVVQKEGVRS 60

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIV 188
            LT+      +   Y C A    G  + +T+V
Sbjct: 61  RLTIYNANIEDAGIYRCQATDAKGQTQEATVV 92

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A Length = 291

 Score = 67.6 bits (165), Expect = 3e-12
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 5/113 (4%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV-GRNVL 160
               F   P    E        + C  V S  P + W+  G+++ L  D +  V   N L
Sbjct: 99  QKLMFKNAPTPQ-EFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYL 157

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
            +  + +++   Y C    +         ++V     P +    + ++   + 
Sbjct: 158 QIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANL 210

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A Length = 291

 Score = 62.6 bits (152), Expect = 1e-10
 Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 10/101 (9%)

Query: 102 RVPPQFSIPPPAL-LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV- 159
            VPP        +     L   + L C A G P P + W K     +  +++        
Sbjct: 192 NVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKD-GEPIENEEEDDEKHIFS 250

Query: 160 -----LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
                LT+  V +++   Y CIA +  G  + S  +KV  K
Sbjct: 251 DDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A Length = 291

 Score = 49.9 bits (119), Expect = 2e-06
 Identities = 21/117 (17%), Positives = 36/117 (30%), Gaps = 15/117 (12%)

Query: 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPM-PFVKWRKGQNIELTPDD------KLPVGR 157
            Q  I P    E+ +       C   G      + W      +L+P+             
Sbjct: 3   LQVDIVPSQG-EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDS 61

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTI-VKVQCKYAPLLTLPVAPLDVKISE 211
           + LT+      +   Y C+  +  G    +T+ VK+       L    AP   +  E
Sbjct: 62  STLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIF----QKLMFKNAPTPQEFKE 114

>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens} Length = 91

 Score = 62.4 bits (152), Expect = 3e-12
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLD 163
             Q  + P +  ++M  S L L CVAVGSP+P  +W K   + LT +      + +  + 
Sbjct: 3   KLQICVEPTSQ-KLMPGSTLVLQCVAVGSPIPHYQWFKN-ELPLTHET-----KKLYMVP 55

Query: 164 RVTESE--NYTCIAASVLGVIETSTIV 188
            V       Y C   +     ++  + 
Sbjct: 56  YVDLEHQGTYWCHVYNDRDSQDSKKVE 82

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 69.4 bits (170), Expect = 3e-12
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 11/116 (9%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GR 157
           + PP+F         V  D      C   GSP   V W K    E+    K  +      
Sbjct: 288 QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKD-ETEIQESSKFRMSFVESV 346

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
            VL +  ++  +  +YTC A +  G   +ST +KV  K  P+      P  V+  +
Sbjct: 347 AVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKV--KEPPVFRKK--PHPVETLK 398

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 66.4 bits (162), Expect = 2e-11
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GR 157
           + PP F    P  +E +  + ++L C   G+P   V W K    EL    K  +      
Sbjct: 382 KEPPVF-RKKPHPVETLKGADVHLECELQGTPPFQVSWHKD-KRELRSGKKYKIMSENFL 439

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             + +  V  ++   Y C A++ +G       + ++
Sbjct: 440 TSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK 475

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 64.8 bits (158), Expect = 6e-11
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 8/98 (8%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV---- 155
              VPP F + P ++ ++ L       C   G+    + W K  N E+ P     +    
Sbjct: 193 EHEVPPFFDLKPVSV-DLALGESGTFKCHVTGTAPIKITWAKD-NREIRPGGNYKMTLVE 250

Query: 156 GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
               LT+ +VT+ +   YTC A++V G    S  + VQ
Sbjct: 251 NTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQ 288

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 61.0 bits (148), Expect = 1e-09
 Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDK--LPVGRNVL 160
           PP F  P   + E  +  P+ L C   G+P   + W K    +   P  K         L
Sbjct: 5   PPYFIEPLEHV-EAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASL 63

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
            +++V  S+   YTC A + +G + +S ++ ++ +  P  +      DV  + 
Sbjct: 64  VINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLP-PSFARKLKDVHETL 115

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 60.6 bits (147), Expect = 2e-09
 Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 7/96 (7%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN--- 158
           + PP+F      +   ++   + L     G+    V W K +   +   D + +  +   
Sbjct: 475 KAPPRFVKKLSDI-STVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENI 533

Query: 159 -VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             L   R   +    YTC   +  G  E    + V 
Sbjct: 534 ATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus} Length = 570

 Score = 58.7 bits (142), Expect = 6e-09
 Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 8/103 (7%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN- 158
            R++PP F+     +    L  P+   C   GS    V W K     L  D  L      
Sbjct: 97  ERKLPPSFARKLKDV-HETLGFPVAFECRINGSEPLQVSWYKD-GELLKDDANLQTSFIH 154

Query: 159 ---VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
               L + +  +S    Y C A++ LG   +S  + +     P
Sbjct: 155 NVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVP 197

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 Length = 247

 Score = 66.4 bits (161), Expect = 4e-12
 Identities = 27/207 (13%), Positives = 63/207 (30%), Gaps = 18/207 (8%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTH-SGENIISYELYWNDTYAKAK----HHRRIGLVET 676
               +++        +   W   +     N+  +  Y N    K +    +     +   
Sbjct: 38  LPLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSG 97

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRIS 736
             L     +      +  Q PR        +       +P   P+N++   LS + + ++
Sbjct: 98  CQLQKKEIHLYQTFVVQLQDPREPRRQATQMLKLQNLVIP-WAPENLTLHKLSESQLELN 156

Query: 737 WEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGT 796
           W    +     H+V Y+         D   +  ++  +  F L  +     Y   V +  
Sbjct: 157 WNNRFLNHCLEHLVQYRTD------WDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRF 210

Query: 797 SIGDGPS------SYPITIRTHEDDPS 817
           +   G +      S+PI   ++    +
Sbjct: 211 NPLCGSAQHWSEWSHPIHWGSNTSKEN 237

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 Length = 247

 Score = 58.7 bits (141), Expect = 2e-09
 Identities = 33/191 (17%), Positives = 57/191 (29%), Gaps = 18/191 (9%)

Query: 400 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAA 459
           S       TL+Y +        +                T G   Q    +      +  
Sbjct: 61  SEPQPTNLTLHYWY-----KNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQL 115

Query: 460 QSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYY 519
           Q PR        +        P  AP ++ +  LS S + + W+     +     + V Y
Sbjct: 116 QDPREPRRQATQMLKLQNLVIPW-APENLTLHKLSESQLELNWNNRFLNHCLE--HLVQY 172

Query: 520 TQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPL------SAPVLV 573
             D      +W  Q VD     ++  +     YT RV++  +   G        S P+  
Sbjct: 173 RTDWD---HSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHW 229

Query: 574 KTQQGVPSQPR 584
            +     + PR
Sbjct: 230 GSNTSKEN-PR 239

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 Length = 247

 Score = 49.4 bits (117), Expect = 2e-06
 Identities = 30/236 (12%), Positives = 69/236 (29%), Gaps = 28/236 (11%)

Query: 180 GVIETSTIVKVQCKYAPLLTLPVAPL-DVKISEVTATSVRLDWTYPSETLL--YYVIQYK 236
           G  +T+    +       L++   PL +V+        +   W   SE       +  + 
Sbjct: 15  GNEDTTADFFLTTMPTDSLSVSTLPLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWY 74

Query: 237 PKAANTPYSE-----ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
             + N    +      S  IT+   ++    +    F +   +       ++  +     
Sbjct: 75  KNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQDPREPRRQATQMLKLQNL 134

Query: 292 TEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI----------TAKHHRRIGLVETYSL 341
             P  AP ++ +  LS S + + W+     +              +   + +     +SL
Sbjct: 135 VIPW-APENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVDYRHKFSL 193

Query: 342 TGLYPNTLYYIWLAAQSPRGEGATT------PPIPVRTKQYGKTPGFGEQAAKHHR 391
             +     Y   + ++     G+         PI   +    + P        HH 
Sbjct: 194 PSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTSKENP---RTGHHHHH 246

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 Length = 247

 Score = 48.3 bits (114), Expect = 3e-06
 Identities = 20/201 (9%), Positives = 50/201 (24%), Gaps = 25/201 (12%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRS-DSEASIVTLKN 773
           V   P   V C   +   +  +W+     +     ++Y  +  +  +       + + + 
Sbjct: 35  VSTLPLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEI 94

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTN 833
            +   L + +        V           +  +    +   P      +N        +
Sbjct: 95  TSGCQLQKKEIHLYQTFVVQLQDPREPRRQATQMLKLQNLVIPW---APENLTLHKLSES 151

Query: 834 ------GSNFKGGYL---------NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTR 878
                  + F    L          D    + S     + ++  +     YT +V +   
Sbjct: 152 QLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFN 211

Query: 879 KGDGDR------SKPETIKTP 893
              G        S P    + 
Sbjct: 212 PLCGSAQHWSEWSHPIHWGSN 232

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens} Length = 189

 Score = 65.2 bits (159), Expect = 4e-12
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 100 VRRVPPQFSIPP-PALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGR 157
           +  VPP  S+P             +  SC A GSP P + W + G+ IE      L    
Sbjct: 92  IVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN 151

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             LT+  +  S+   Y C A +  G  E    ++V 
Sbjct: 152 TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens} Length = 189

 Score = 59.0 bits (143), Expect = 4e-10
 Identities = 17/121 (14%), Positives = 33/121 (27%), Gaps = 7/121 (5%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV-GRNVLT 161
              F        E        + C    SP P V W    + +    D++  +   N L 
Sbjct: 2   MLTFREVVSPQ-EFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ 60

Query: 162 LDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
           +  + +S+   Y C              + V     P +++P    +          +  
Sbjct: 61  ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAER--GEEMTF 118

Query: 220 D 220
            
Sbjct: 119 S 119

>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A Length = 106

 Score = 62.8 bits (153), Expect = 4e-12
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 8/96 (8%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GR 157
            +  +    P ++  V        SC   G P+P V W +     L+   +  V     +
Sbjct: 12  TLAARILTKPRSM-TVYEGESARFSCDTDGEPVPTVTWLRK-GQVLSTSARHQVTTTKYK 69

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           +   +  V  S+  NY+ +  +  G  E    + +Q
Sbjct: 70  STFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210

 Score = 65.1 bits (158), Expect = 5e-12
 Identities = 33/206 (16%), Positives = 60/206 (29%), Gaps = 14/206 (6%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGEN---IISYELYWNDTYAKAKHHRRIGLVE-TY 677
            KP   +     +   T  W   T  G      ++Y         +   +   G     +
Sbjct: 5   GKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITGGPNSCHF 64

Query: 678 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL----SSTSI 733
                     Y + + A +  G    +  + V     V   PP  ++ E          +
Sbjct: 65  GKQYTSMWRTYIMMVNATNQMGSS-FSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYL 123

Query: 734 RISWEPPPV--ERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIW 791
            I W PP +   ++    + Y+++        +E  I     QT F +  L    +Y + 
Sbjct: 124 WIKWSPPTLIDLKTGWFTLLYEIRLKPEK--AAEWEIHFAGQQTEFKILSLHPGQKYLVQ 181

Query: 792 VLAGTSIGD-GPSSYPITIRTHEDDP 816
           V      G     S    I+   D  
Sbjct: 182 VRCKPDHGYWSAWSPATFIQIPSDFT 207

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210

 Score = 63.2 bits (153), Expect = 2e-11
 Identities = 32/206 (15%), Positives = 51/206 (24%), Gaps = 23/206 (11%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
           +P   P+   C   +  +    W P        +      +  ET   +    I    N 
Sbjct: 2   LPPGKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITGGPNS 61

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPI---TIRTHEDDPSEVCPTQNDFRKNKK 831
             F       W  Y + V A   +G   S       T     D P E+          K 
Sbjct: 62  CHFGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKP 121

Query: 832 ------TNGSNFKGGYLNDPMRFDV-------------SDGGALELNVTGLQPDTIYTIQ 872
                 +  +          + +++               G   E  +  L P   Y +Q
Sbjct: 122 YLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQ 181

Query: 873 VAALTRKGD-GDRSKPETIKTPGGVP 897
           V      G     S    I+ P    
Sbjct: 182 VRCKPDHGYWSAWSPATFIQIPSDFT 207

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210

 Score = 55.5 bits (133), Expect = 1e-08
 Identities = 35/243 (14%), Positives = 63/243 (25%), Gaps = 45/243 (18%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL 540
           P   P   + R  +  T    W  P T  G  T Y + Y ++    M      +      
Sbjct: 3   PPGKPEIFKCRSPNKETFTCWW-RPGTDGGLPTNYSLTYHREGETLMHECPDYITGGPNS 61

Query: 541 TTI--SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRA----VDIQET 594
                   +    Y + V A   +G        +  T    P  P +L       + ++ 
Sbjct: 62  CHFGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKP 121

Query: 595 AVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISY 654
            + + WS PT                                          +G   + Y
Sbjct: 122 YLWIKWSPPT-------------------------------------LIDLKTGWFTLLY 144

Query: 655 ELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE-GATTPPIPVRTKQ 713
           E+      A        G    + +  L+P   Y + +  +   G   A +P   ++   
Sbjct: 145 EIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204

Query: 714 YVP 716
              
Sbjct: 205 DFT 207

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210

 Score = 50.9 bits (121), Expect = 4e-07
 Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 13/150 (8%)

Query: 442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSST---- 497
           FG+Q       Y + + A +  G   +       T   +P   P ++ V           
Sbjct: 64  FGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPD-PPLELAVEVKQPEDRKPY 122

Query: 498 MVIQWDEPETPNGQITG----YKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT 553
           + I+W  P   + +       Y++    +++   + WE           I  L P   Y 
Sbjct: 123 LWIKWSPPTLIDLKTGWFTLLYEIRLKPEKA---AEWEIHFAGQQTEFKILSLHPGQKYL 179

Query: 554 IRVQAFTSVGP-GPLSAPVLVKTQQGVPSQ 582
           ++V+     G     S    ++        
Sbjct: 180 VQVRCKPDHGYWSAWSPATFIQIPSDFTMN 209

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210

 Score = 50.5 bits (120), Expect = 4e-07
 Identities = 30/201 (14%), Positives = 60/201 (29%), Gaps = 28/201 (13%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET------LLYYVIQYKPKAANTPYSEISGIITTY 254
           P  P   K       +    W   ++        L Y  + +      P     G  + +
Sbjct: 4   PGKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITGGPNSCH 63

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSST---- 310
           +  +  S +  Y   + A N +G        V  T   +P   P ++ V           
Sbjct: 64  FGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPD-PPLELAVEVKQPEDRKPY 122

Query: 311 MVIQWDEP---ETPNGQITAKHHRRIGLVE-------------TYSLTGLYPNTLYYIWL 354
           + I+W  P   +   G  T  +  R+   +              + +  L+P   Y + +
Sbjct: 123 LWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQV 182

Query: 355 AAQSPRGE-GATTPPIPVRTK 374
             +   G   A +P   ++  
Sbjct: 183 RCKPDHGYWSAWSPATFIQIP 203

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 35/211 (16%), Positives = 65/211 (30%), Gaps = 24/211 (11%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSC-----VAVGSPMPFV--KWRKGQNIELTPDDKLPV 155
           +PP      P + +    +    +C        G P  +     R+G+ +     D +  
Sbjct: 2   LPPG----KPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITG 57

Query: 156 GRNVLTLDRVTESENYTCI----AASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
           G N     +   S   T I    A + +G   +  +                 ++VK  E
Sbjct: 58  GPNSCHFGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPE 117

Query: 212 VTATSVRLDWTYPSET-------LLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYT 264
                + + W+ P+          L Y I+ KP+ A       +G   T + + +L P  
Sbjct: 118 DRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQ-QTEFKILSLHPGQ 176

Query: 265 EYEFYIIAVNNLGR-GPPSSPAVITTGETEP 294
           +Y   +    + G     S    I       
Sbjct: 177 KYLVQVRCKPDHGYWSAWSPATFIQIPSDFT 207

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 62.3 bits (151), Expect = 5e-12
 Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 4/101 (3%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYP---SETLLYYVIQYK-PKAANTPYSEISGIITTYYT 256
            ++P    ++  T   V L W  P    + L  YV++ +                 T   
Sbjct: 7   GLSPPRGLVAVRTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELL 66

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
           V  L     YEF ++A        PS+ A ++T      ++
Sbjct: 67  VPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSGPSS 107

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 54.2 bits (130), Expect = 4e-09
 Identities = 20/104 (19%), Positives = 32/104 (30%), Gaps = 8/104 (7%)

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWET---QVVD 536
              + PR +     +   +++ WD PE    ++ GY +   Q        WE     V  
Sbjct: 6   SGLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQ----GWEVLDPAVAG 60

Query: 537 NNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580
                 +  L    +Y  R+ AF        S    V T     
Sbjct: 61  TETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSG 104

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 53.8 bits (129), Expect = 5e-09
 Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 3/101 (2%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
             +PP+ +     +   + + W+PP  E     +  Y L+  +  +            +T
Sbjct: 7   GLSPPRGLVAVR-TPRGVLLHWDPP--ELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTET 63

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
             ++  L K   Y   ++A         S    + T     
Sbjct: 64  ELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSG 104

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 67.6 bits (165), Expect = 5e-12
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 8/122 (6%)

Query: 72  ARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG 131
           A SH     +SV  +      +   A+  R+  P      PA    +    + L C A G
Sbjct: 177 ATSHIDFITKSVFSK---FSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFG 233

Query: 132 SPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVK 189
           +P+P +KWRK      +   K      +L +  V   +   Y C A ++ G       + 
Sbjct: 234 NPVPQIKWRKLDG---SQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRII 290

Query: 190 VQ 191
           + 
Sbjct: 291 IH 292

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 63.0 bits (153), Expect = 2e-10
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLT 161
              P +        E  + S L  SCVA G P P V+W +     L   +++ V    L 
Sbjct: 292 HAQPDWLDVITDT-EADIGSDLRWSCVASGKPRPAVRWLRD-GQPLASQNRIEVSGGELR 349

Query: 162 LDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             ++   +   Y C+A +  G +  S  + VQ
Sbjct: 350 FSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 56.8 bits (137), Expect = 1e-08
 Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 7/102 (6%)

Query: 101 RRVPPQFSIPPPALL--EVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGR 157
           R   P F   P   L  E   +  + L+C A  +P    +W+  G  +++ PD +  +  
Sbjct: 1   RSYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVA 60

Query: 158 NVLTLDRVTESE---NYTCIAASVLGVIETSTIVKVQCKYAP 196
             L +    +++   +Y C+A +  G +  S    ++  +  
Sbjct: 61  GDLVISNPVKAKDAGSYQCVATNARGTV-VSREASLRFGFLQ 101

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A Length = 382

 Score = 46.0 bits (109), Expect = 4e-05
 Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 10/96 (10%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDK-----LPVG 156
              +FS      +++     +  +C      P    +W   +     P D         G
Sbjct: 99  FLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTG 158

Query: 157 RNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKV 190
              L + +   S+  NY+C A S +  I  S   K 
Sbjct: 159 --NLYIAKTEASDLGNYSCFATSHIDFITKSVFSKF 192

>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4 Length = 98

 Score = 61.7 bits (150), Expect = 7e-12
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 5/96 (5%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGR 157
                P   ++       V   + +   C A   SP   + W +  N +L        G 
Sbjct: 4   AAPSKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNG- 62

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            +LT+  V  S+   Y C  +++  + + +  + VQ
Sbjct: 63  -ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 97

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A Length = 215

 Score = 64.8 bits (157), Expect = 8e-12
 Identities = 29/212 (13%), Positives = 64/212 (30%), Gaps = 24/212 (11%)

Query: 622 AKPRDLRAV-DIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE----- 675
           A P +L  +  +   ++   W     +     S+ L    + A  ++             
Sbjct: 6   ASPSNLSCLMHLTTNSLVCQWEPGPETHLPT-SFILKSFRSRADCQYQGDTIPDCVAKKR 64

Query: 676 ----TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLS-- 729
               +     L       IW+ A++  G  + +P + +     V   PP   + +     
Sbjct: 65  QNNCSIPRKNLLLYQYMAIWVQAENMLGS-SESPKLCLDPMDVVKLEPPMLQALDIGPDV 123

Query: 730 ----STSIRISWEPPPVERSNGHIVYYKLQFVETGRS-DSEASIVTLKNQTSFVLDELKK 784
                  + +SW+P     S       +L++    +  +         ++  F L  L +
Sbjct: 124 VSHQPGCLWLSWKPWK--PSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQ 181

Query: 785 WTEYRIWVLAGTSIGDGPSSY---PITIRTHE 813
              Y + +    S   G  S     + +R   
Sbjct: 182 APVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A Length = 215

 Score = 55.2 bits (132), Expect = 1e-08
 Identities = 16/145 (11%), Positives = 41/145 (28%), Gaps = 10/145 (6%)

Query: 442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS------S 495
              + L       IW+ A++  G  + +P + +          P    +           
Sbjct: 70  IPRKNLLLYQYMAIWVQAENMLGS-SESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQP 128

Query: 496 STMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIR 555
             + + W   +         ++ Y              +  +     +  L    +YT++
Sbjct: 129 GCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQ 188

Query: 556 VQAFTSVGPGPLSA---PVLVKTQQ 577
           ++   S  PG  S     + ++   
Sbjct: 189 MRCIRSSLPGFWSPWSPGLQLRPTM 213

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A Length = 215

 Score = 54.4 bits (130), Expect = 2e-08
 Identities = 35/218 (16%), Positives = 60/218 (27%), Gaps = 47/218 (21%)

Query: 715 VPGAPPQNVSCE-PLSSTSIRISWEPPP----VERSNGHIVYYKLQFVETGRSDSEASIV 769
            P A P N+SC   L++ S+   WEP P               +      G +  +    
Sbjct: 3   YPPASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAK 62

Query: 770 TLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP----------------------- 806
             +N  S     L  +    IWV A   +G   S                          
Sbjct: 63  KRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGPD 122

Query: 807 --------ITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALEL 858
                   + +      PSE    + + R   +  G+N+                   + 
Sbjct: 123 VVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWT--------LVFHLPSSKDQF 174

Query: 859 NVTGLQPDTIYTIQVAALTRKGDG---DRSKPETIKTP 893
            + GL    +YT+Q+  +     G     S    ++  
Sbjct: 175 ELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPT 212

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A Length = 215

 Score = 54.1 bits (129), Expect = 4e-08
 Identities = 26/210 (12%), Positives = 59/210 (28%), Gaps = 36/210 (17%)

Query: 201 PVAPLDVK-ISEVTATSVRLDWTYPSETLLY--YVIQYKPKAAN--------TPYSEISG 249
           P +P ++  +  +T  S+   W    ET L   ++++     A+                
Sbjct: 5   PASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKR 64

Query: 250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLS-- 307
                   +NL  Y     ++ A N LG    S    +   +      P    +      
Sbjct: 65  QNNCSIPRKNLLLYQYMAIWVQAENMLGSS-ESPKLCLDPMDVVKLEPPMLQALDIGPDV 123

Query: 308 ----SSTMVIQWDEPETPNG-----QITAKHHRR----------IGLVETYSLTGLYPNT 348
                  + + W   +         ++  +   +              + + L GL+   
Sbjct: 124 VSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAP 183

Query: 349 LYYIWLAAQSPRGEGAT---TPPIPVRTKQ 375
           +Y + +        G     +P + +R   
Sbjct: 184 VYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A Length = 215

 Score = 51.4 bits (122), Expect = 3e-07
 Identities = 36/246 (14%), Positives = 67/246 (27%), Gaps = 49/246 (19%)

Query: 481 PGTAPRDVQ-VRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWET------Q 533
           P  +P ++  +  L+++++V QW EP       T + +   + ++      +T      +
Sbjct: 4   PPASPSNLSCLMHLTTNSLVCQW-EPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAK 62

Query: 534 VVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQE 593
              NN      +L  +    I VQA   +G        L          P          
Sbjct: 63  KRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQAL----- 117

Query: 594 TAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIIS 653
                                               V  Q   + L+W     S      
Sbjct: 118 ------------------------------DIGPDVVSHQPGCLWLSWKPWKPSEYMEQE 147

Query: 654 YELYWNDTYAKAKHHRRIGLVET---YSLTGLYPNTLYYIWLAAQSPRGEGAT---TPPI 707
            EL +      A       L  +   + L GL+   +Y + +        G     +P +
Sbjct: 148 CELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGL 207

Query: 708 PVRTKQ 713
            +R   
Sbjct: 208 QLRPTM 213

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A Length = 215

 Score = 45.6 bits (107), Expect = 3e-05
 Identities = 10/101 (9%), Positives = 29/101 (28%), Gaps = 8/101 (7%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIIT--T 253
            L    +   +       + L W     +        ++Y+P+     ++ +  + +   
Sbjct: 113 MLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKD 172

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRG---PPSSPAVITTGE 291
            + +  L     Y   +  + +   G   P S    +    
Sbjct: 173 QFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens} Length = 317

 Score = 66.1 bits (161), Expect = 1e-11
 Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 9/127 (7%)

Query: 72  ARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG 131
            +    L+ Q+          ++Q A   +          P ++ +     LNL+C   G
Sbjct: 190 HQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVL-GGLPDVVTIQEGKALNLTCNVWG 248

Query: 132 SPMPFVKWRKGQNIELTPDDKLPV-----GRNVLTLDRVTESE--NYTCIAASVLGVIET 184
            P P V W K     L  DD   +          T++ V+ ++   Y  +  +  G   +
Sbjct: 249 DPPPEVSWLKN-EKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETS 307

Query: 185 STIVKVQ 191
              V V 
Sbjct: 308 DFTVSVF 314

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens} Length = 317

 Score = 60.7 bits (147), Expect = 6e-10
 Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 8/94 (8%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDK--LPVGRNV 159
             P F        EV  +  + L C          + W K    E++ D+K     G   
Sbjct: 6   TGPHFVEYLSW--EVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDFKDGICT 62

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           L +   ++ +   Y  I     G  ++   +  +
Sbjct: 63  LLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 96

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens} Length = 317

 Score = 44.9 bits (106), Expect = 6e-05
 Identities = 13/116 (11%), Positives = 25/116 (21%), Gaps = 5/116 (4%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRNVLTL 162
                      ++   +     S V        V W   G  I  +   K  V    + L
Sbjct: 107 KKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWL 166

Query: 163 --DRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTA 214
             +  T ++   Y           + +  +  Q                   +  A
Sbjct: 167 QINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRA 222

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R Length = 315

 Score = 65.5 bits (159), Expect = 1e-11
 Identities = 17/114 (14%), Positives = 32/114 (28%), Gaps = 18/114 (15%)

Query: 95  QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKG------------ 142
              +  +   P    P    +EV L S + L C   G       W+              
Sbjct: 199 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 258

Query: 143 ---QNIELTPDDKLPVGRNVLTLDRVTESE---NYTCIAASVLGVIETSTIVKV 190
               ++E   + +      VL +  +        +TC A +  G+      +  
Sbjct: 259 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 312

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R Length = 315

 Score = 43.2 bits (101), Expect = 2e-04
 Identities = 11/116 (9%), Positives = 28/116 (24%), Gaps = 7/116 (6%)

Query: 108 SIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRK-GQNIELTPDDK--LPVGRNVLTLD 163
                 +L    +      C    +     + W K      ++ +    +   +  L   
Sbjct: 8   EREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFV 67

Query: 164 RVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSV 217
                +  +Y C+  +    +      K   +  P L      +  +   V     
Sbjct: 68  PAKVEDSGHYYCVVRNSSYCLRIKISAKFV-ENEPNLCYNAQAIFKQKLPVAGDGG 122

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R Length = 315

 Score = 42.8 bits (100), Expect = 4e-04
 Identities = 20/135 (14%), Positives = 42/135 (31%), Gaps = 14/135 (10%)

Query: 100 VRRVPPQFSIPPPALLE--VMLDSPLNLSC------VAVGSPMPFVKWRKGQNIELTPDD 151
                P       A+ +  + +     L C          + +P ++W K     L  + 
Sbjct: 96  FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 155

Query: 152 KLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETS----TIVKVQCKYAPLLTLPVAPL 205
                ++ L +  V E    NYTC A+      +             +  P   + V+P 
Sbjct: 156 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 215

Query: 206 DVKISEVTATSVRLD 220
           +  +     + ++L 
Sbjct: 216 NETMEVDLGSQIQLI 230

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* Length = 214

 Score = 64.0 bits (155), Expect = 1e-11
 Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 6/142 (4%)

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPP 741
           L    +  + +  +              +  + +    P ++    + +    ISWE   
Sbjct: 72  LTTVDIVTLRVLCREGVRW-RVMAIQDFKPFENLRLMAPISLQVVHVETHRCNISWEISQ 130

Query: 742 VERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGD 800
                   + ++ + +  G +  EA ++TLK  Q    L+ L   T+Y   V      G+
Sbjct: 131 ASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGE 190

Query: 801 G----PSSYPITIRTHEDDPSE 818
                P S P+  RT      +
Sbjct: 191 FTTWSPWSQPLAFRTKPAALGK 212

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* Length = 214

 Score = 54.4 bits (130), Expect = 3e-08
 Identities = 24/191 (12%), Positives = 48/191 (25%), Gaps = 12/191 (6%)

Query: 400 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAA 459
                    ++  W   +  +      P                 Q L    +  + +  
Sbjct: 26  GALQDTSCQVHA-WPDRRRWQQTCELLPVSQASWACNLILGAPDSQKLTTVDIVTLRVLC 84

Query: 460 QSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYY 519
           +                +      AP  +QV  + +    I W+             + +
Sbjct: 85  REGVRWRVMAIQDFKPFENLRLM-APISLQVVHVETHRCNISWEIS--QASHYFERHLEF 141

Query: 520 TQDQSLPMSAWETQ----VVDNNQLTTISDLTPHTIYTIRVQAFTSVGPG----PLSAPV 571
                 P   WE      +    +   +  LTP T Y  +V+     G      P S P+
Sbjct: 142 EARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPL 201

Query: 572 LVKTQQGVPSQ 582
             +T+     +
Sbjct: 202 AFRTKPAALGK 212

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* Length = 214

 Score = 53.3 bits (127), Expect = 6e-08
 Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 11/106 (10%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPS-----ETLLYYVIQYKPKAANTPYSEISGII--TT 253
            +AP+ +++  V      + W         E  L +  +          + +  +     
Sbjct: 106 LMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQE 165

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRG----PPSSPAVITTGETEPG 295
           +  +  L+P T+YEF +      G      P S P    T     G
Sbjct: 166 WICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAALG 211

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* Length = 214

 Score = 42.1 bits (98), Expect = 3e-04
 Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 12/133 (9%)

Query: 599 AWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKP--THSGENIISYEL 656
                      I  ++ + N     P  L+ V ++     ++W     +H  E  + +E 
Sbjct: 84  CREGVRWRVMAIQDFKPFENLRLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEA 143

Query: 657 YW---NDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGAT----TPPIPV 709
                  T+ +A         E   L  L P+T Y   +  +  +GE  T    + P+  
Sbjct: 144 RTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAF 203

Query: 710 RTKQYVPGAPPQN 722
           RTK   P A  ++
Sbjct: 204 RTK---PAALGKD 213

>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens} Length = 116

 Score = 61.3 bits (149), Expect = 1e-11
 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKL----PVG 156
           +  P F I  P   +V+    + L C     P P + W++  + ++   D         G
Sbjct: 13  KRAPMF-IYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTG 71

Query: 157 RNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLP 201
           R  L +  V + +   YT  A +  GV   +T + V  +  P  TLP
Sbjct: 72  RVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTAR--PNQTLP 116

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A Length = 212

 Score = 63.7 bits (155), Expect = 2e-11
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 11/119 (9%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV---GRN 158
            PP+F+  P      +     +  C A G P P + W K G+ +     + +       +
Sbjct: 5   TPPRFTRTPVDQ-TGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGS 63

Query: 159 VLTLDRVTESE---NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPV---APLDVKISE 211
           VL +  +        Y C+A++ +G I  ST + V  +       P     P    +  
Sbjct: 64  VLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVER 122

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A Length = 212

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 9/100 (9%)

Query: 95  QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDK- 152
              D + R  P      P L  V       + C A G+P P + W K    ++ + ++  
Sbjct: 99  LREDQIPRGFPTI-DMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGR 157

Query: 153 ----LPVGRNVLTLDRVTESE--NYTCIAASVLGVIETST 186
                      L +++  ES+   Y C+A +  G   ++ 
Sbjct: 158 IKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAP 197

>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens} Length = 212

 Score = 63.7 bits (155), Expect = 2e-11
 Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 9/127 (7%)

Query: 72  ARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG 131
            +    L+ Q+          ++Q A   +          P ++ +     LNL+C   G
Sbjct: 85  HQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVL-GGLPDVVTIQEGKALNLTCNVWG 143

Query: 132 SPMPFVKWRKGQNIELTPDDKLPV-----GRNVLTLDRVTESE--NYTCIAASVLGVIET 184
            P P V W K     L   D   +          T++ V+ ++   Y  +  +  G   +
Sbjct: 144 DPPPEVSWLKN-EKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETS 202

Query: 185 STIVKVQ 191
              V V 
Sbjct: 203 DFTVSVF 209

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 Length = 313

 Score = 65.3 bits (158), Expect = 2e-11
 Identities = 27/206 (13%), Positives = 59/206 (28%), Gaps = 21/206 (10%)

Query: 630 VDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE--------TYSLTG 681
           +++  +++   W     +          +            I            +     
Sbjct: 109 MNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKH 168

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL------SSTSIRI 735
           L       IW+ A++  G  + +P + +     V   PP   + +P        +  +++
Sbjct: 169 LLLYQNMGIWVQAENALGT-SMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQL 227

Query: 736 SWEPPPVERSNGHIVYYKLQF-VETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLA 794
           SWEP             +L+   + G +              + L  L   T Y + +  
Sbjct: 228 SWEPWQ--PGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRC 285

Query: 795 GTSIGDGPSSY---PITIRTHEDDPS 817
                 G  S     + +RT E   +
Sbjct: 286 IRWPLPGHWSDWSPSLELRTTERAAA 311

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 Length = 313

 Score = 61.5 bits (148), Expect = 4e-10
 Identities = 48/314 (15%), Positives = 94/314 (29%), Gaps = 48/314 (15%)

Query: 109 IPPPALLEVMLDSPLNLSCVA-----VGSPMPFVKWRKGQNIELTPDDKLPVGRN---VL 160
           I   A + V L  P+  SC+         P P + WR G  ++     +         ++
Sbjct: 5   ISVSAPI-VHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESII 63

Query: 161 TLDRVTESE-NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRL 219
           TL  +  ++   +C        ++    V+++  Y P +   ++     +  +T +S+  
Sbjct: 64  TLPHLNHTQAFLSCSLNWG-NSLQILDQVELRAGYPPAIPHNLS----CLMNLTTSSLIC 118

Query: 220 DWTYPSETLLY--YVIQYKPKAAN--------TPYSEISGIITTYYTVRNLSPYTEYEFY 269
            W    ET L   + ++      N               G        ++L  Y     +
Sbjct: 119 QWEPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIW 178

Query: 270 IIAVNNLGRGPPSSPAVITTGETEPG-----TAPRDVQVRPLSSSTMVIQWDEPETPNGQ 324
           + A N LG        +      +       T     +  P  +  + + W+  +     
Sbjct: 179 VQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHI 238

Query: 325 I---------------TAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG---ATT 366
                            A           Y L GL P T Y + +        G     +
Sbjct: 239 NQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWS 298

Query: 367 PPIPVRTKQYGKTP 380
           P + +RT +    P
Sbjct: 299 PSLELRTTERAAAP 312

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 Length = 313

 Score = 61.1 bits (147), Expect = 4e-10
 Identities = 26/199 (13%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 397 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIW 456
           E    T L  +     + +  + + +G +      +  Q   +     + L       IW
Sbjct: 121 EPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCS--IPRKHLLLYQNMGIW 178

Query: 457 LAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPL------SSSTMVIQWDEPETPNG 510
           + A++  G  + +P + +          P    + P        +  + + W+  +    
Sbjct: 179 VQAENALGT-SMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLH 237

Query: 511 QITGYKVYYTQDQSLPMSAWETQVVDNNQLT--TISDLTPHTIYTIRVQAFTSVGPG--- 565
                ++ +   +    ++W        +     +  L P T YT++++      PG   
Sbjct: 238 INQKCELRHKPQRG--EASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWS 295

Query: 566 PLSAPVLVKTQQGVPSQPR 584
             S  + ++T +   + PR
Sbjct: 296 DWSPSLELRTTERAAA-PR 313

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 Length = 313

 Score = 53.0 bits (126), Expect = 2e-07
 Identities = 38/213 (17%), Positives = 66/213 (30%), Gaps = 31/213 (14%)

Query: 716 PGAPPQNVSCE-PLSSTSIRISWEPPPVE--RSNGHIVYYKLQFVETGRSDSEASIV--T 770
           P A P N+SC   L+++S+   WEP P     ++  +  +K +     + DS    V   
Sbjct: 98  PPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKD 157

Query: 771 LKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSS---YPITIRTHEDDPSEVCPTQNDFR 827
            ++  S     L  +    IWV A  ++G   S             + P       +   
Sbjct: 158 GQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEA 217

Query: 828 KNKKTNGSNFKGGYLNDPMRFD--------------------VSDGGALELNVTGLQPDT 867
              +              +  +                         AL+  + GL P T
Sbjct: 218 APPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPAT 277

Query: 868 IYTIQVAALTRKGDG---DRSKPETIKTPGGVP 897
            YT+Q+  +     G   D S    ++T     
Sbjct: 278 AYTLQIRCIRWPLPGHWSDWSPSLELRTTERAA 310

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 Length = 313

 Score = 52.6 bits (125), Expect = 2e-07
 Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 10/109 (9%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETL---LYYVIQYKPKAANTPYSEISGIIT--T 253
            L       + +   A  ++L W      L       +++KP+     ++ +  +     
Sbjct: 207 MLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEAL 266

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRG---PPSSPAVITTGETEPGTAPR 299
            Y +  L P T Y   I  +     G     S    + T E     APR
Sbjct: 267 QYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAA--APR 313

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 Length = 313

 Score = 51.9 bits (123), Expect = 4e-07
 Identities = 36/250 (14%), Positives = 65/250 (26%), Gaps = 49/250 (19%)

Query: 481 PGTAPRDVQ-VRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           P   P ++  +  L++S+++ QW EP       T + +   + +    +  ++ +    +
Sbjct: 98  PPAIPHNLSCLMNLTTSSLICQW-EPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPK 156

Query: 540 LT------TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQE 593
                       L  +    I VQA  ++G        L          P         E
Sbjct: 157 DGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPE 216

Query: 594 TAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIIS 653
                                              A   Q   + L+W            
Sbjct: 217 -----------------------------------AAPPQAGCLQLSWEPWQPGLHINQK 241

Query: 654 YELYW---NDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG---ATTPPI 707
            EL         + A           Y L GL P T Y + +        G     +P +
Sbjct: 242 CELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSL 301

Query: 708 PVRTKQYVPG 717
            +RT +    
Sbjct: 302 ELRTTERAAA 311

>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A Length = 100

 Score = 60.1 bits (146), Expect = 2e-11
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 9/98 (9%)

Query: 102 RVPPQFSIPP---PALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDD---KLP 154
           +  P ++        L  V   + +   C A G+PMP ++W K G+  +        K+ 
Sbjct: 2   KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR 61

Query: 155 VGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKV 190
                L ++ V  S+  NYTC+  +  G I  +  + V
Sbjct: 62  NQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 334

 Score = 65.0 bits (158), Expect = 3e-11
 Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 9/133 (6%)

Query: 68  PTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPP---PALLEVMLDSPLN 124
             R     +     +                 V    P ++ P      LL V   + + 
Sbjct: 83  TQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVR 142

Query: 125 LSCVAVGSPMPFVKWRK-GQNIELTPDD---KLPVGRNVLTLDRVTESE--NYTCIAASV 178
             C A G+P P + W K G+           KL   +  L ++ V  S+  NYTC+  + 
Sbjct: 143 FRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENK 202

Query: 179 LGVIETSTIVKVQ 191
            G I  +  + V 
Sbjct: 203 FGSIRQTYTLDVL 215

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 334

 Score = 56.9 bits (137), Expect = 1e-08
 Identities = 25/115 (21%), Positives = 38/115 (33%), Gaps = 19/115 (16%)

Query: 95  QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ---NIELTPDD 151
            V +     P       PA    +L S +   C       P ++W K       ++ PD 
Sbjct: 213 DVLERSPHRPILQ-AGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDG 271

Query: 152 KLPV-------------GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
              V                VL+L  VT  +   YTC+A + +G    S  + V 
Sbjct: 272 TPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVL 326

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 334

 Score = 54.6 bits (131), Expect = 6e-08
 Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 4/90 (4%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRNVLTL 162
            P         L       + LSC    G PM    W K     L P +++ VG   L +
Sbjct: 7   VPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKD-GTGLVPSERVLVGPQRLQV 65

Query: 163 DRVTESE--NYTCIAASVLGVIETSTIVKV 190
              +  +   Y+C       V+   ++   
Sbjct: 66  LNASHEDSGAYSCRQRLTQRVLCHFSVRVT 95

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C Length = 231

 Score = 63.4 bits (154), Expect = 3e-11
 Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 11/101 (10%)

Query: 101 RRVPPQFSIPP---PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-- 155
            +  P ++        L  V   + +   C A G+PMP ++W K    E   + ++    
Sbjct: 12  NKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKN-GKEFKQEHRIGGYK 70

Query: 156 ---GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
                  L ++ V  S+  NYTC+  +  G I  +  + V 
Sbjct: 71  VRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVV 111

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C Length = 231

 Score = 58.8 bits (142), Expect = 9e-10
 Identities = 24/118 (20%), Positives = 37/118 (31%), Gaps = 17/118 (14%)

Query: 90  AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKG--QNIEL 147
                 V +  R  P       PA    ++   +   C       P ++W K   +N   
Sbjct: 104 HTYHLDVVERSRHRPILQ-AGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSK 162

Query: 148 TPDDKLPV------------GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
              D LP                VL L  VTE++   Y C  ++ +G    S  + V 
Sbjct: 163 YGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVL 220

>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 96

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 20/98 (20%), Positives = 32/98 (32%), Gaps = 11/98 (11%)

Query: 97  ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV 155
           +        Q  + P     V     + L+C     P P + W K G  + L P      
Sbjct: 3   SGSSGLEEVQLVVEP-EGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPS----- 56

Query: 156 GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
              VL L  +   +   Y+C+A       + S  V + 
Sbjct: 57  --PVLILPEIGPQDQGTYSCVATHSSHGPQESRAVSIS 92

>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} Length = 103

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 4/95 (4%)

Query: 197 LLTLPVAPLDVK-ISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEI-SGIITTY 254
           +++ P  P  +  + + +  +  L W        Y V   +   +  PY+ I + I +T 
Sbjct: 1   MVSAPAFPTGLSAVLDSSGNTANLTWNAAPGANSYNV--KRSTKSGGPYTTIATNITSTN 58

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           YT   ++  T+Y + + AV+N      S+ A++  
Sbjct: 59  YTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY 93

>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} Length = 103

 Score = 41.6 bits (98), Expect = 8e-05
 Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 7/94 (7%)

Query: 483 TAPRDVQVRPLSSSTMV-IQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT 541
             P  +     SS     + W+           Y V  +     P +   T +   N   
Sbjct: 6   AFPTGLSAVLDSSGNTANLTWNAAPG----ANSYNVKRSTKSGGPYTTIATNITSTN--Y 59

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
           T + +   T Y   V A ++      SA  +++ 
Sbjct: 60  TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY 93

>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 60.1 bits (146), Expect = 3e-11
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 8/95 (8%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPD----DKLPVGRN 158
            P F +      ++    P+  +C   G+P P + W K G+ I    D     +   G  
Sbjct: 8   APFFEMKL-KHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTC 66

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            L     T  +  NYT +AA+  G I  +  + VQ
Sbjct: 67  SLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQ 101

>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A Length = 154

 Score = 61.4 bits (149), Expect = 3e-11
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 93  VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDD 151
           + +VA+    V P F+     + EV+  S     C   G P P V W K    ++ +   
Sbjct: 30  LEEVAEEKPHVKPYFTKTILDM-EVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHF 88

Query: 152 KL---PVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           ++     G   LT+  V   +   YTC A + LG    +  + V+
Sbjct: 89  QIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVE 133

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 65.3 bits (159), Expect = 3e-11
 Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 6/121 (4%)

Query: 76  ARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPP--PALLEVMLDSPLNLSCVAVGSP 133
           AR      +++             V    P F  P    +   V+    L L C+A G P
Sbjct: 191 ARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVP 250

Query: 134 MPFVKWRK-GQNIELTPDDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKV 190
            P + W K G ++  +   K       L +  V+E +   Y C+A++ +G I  +  V+V
Sbjct: 251 TPDIAWYKKGGDLP-SDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRV 309

Query: 191 Q 191
           +
Sbjct: 310 K 310

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 60.3 bits (146), Expect = 1e-09
 Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDK-LPVGRNV 159
           +  P +   P  L  +       L C A G+P P V+W   G+ ++  P +    V  + 
Sbjct: 310 KAAPYWLDEPKNL-ILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT 368

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           +       S    Y C  ++  G +  +  V V 
Sbjct: 369 IIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 59.1 bits (143), Expect = 3e-09
 Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 10/103 (9%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRN--V 159
            PP  +        V     + + C A G+P P   W +  +   +  D ++ + R    
Sbjct: 15  QPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGT 74

Query: 160 LTLDRVTESEN------YTCIAASVLGVIETSTIVKVQCKYAP 196
           L +D  +          Y C A +  G    S  +++Q   +P
Sbjct: 75  LVIDFRSGGRPEEYEGEYQCFARNKFGTA-LSNRIRLQVSKSP 116

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A* Length = 404

 Score = 48.3 bits (115), Expect = 7e-06
 Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 5/83 (6%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRN-VL 160
             P +       + V   +PL L C    G P P + W       +T D ++  G N  L
Sbjct: 114 KSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDL 173

Query: 161 TLDRVTESE---NYTCIAASVLG 180
               V   +   +Y+C A     
Sbjct: 174 YFSNVMLQDMQTDYSCNARFHFT 196

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A Length = 197

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 10/97 (10%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK------LPVG 156
           + P F       L V   S   L C   G P P VKW +    E+  D           G
Sbjct: 3   MAPHF-KEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQ-GKEIIADGLKYRIQEFKGG 60

Query: 157 RNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            + L +  VT+ +   Y   A +  G +  +  ++V+
Sbjct: 61  YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVE 97

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A Length = 197

 Score = 62.0 bits (151), Expect = 5e-11
 Identities = 15/104 (14%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 95  QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP 154
           +V  P +   P+  +     +  +    +++     G P P + W+KG    +  +    
Sbjct: 95  EVEVPAKIHLPKT-LEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKG-QDLIDNNGHYQ 152

Query: 155 V-----GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           V       +++  + V   +   Y   A +  G+ + +  + V 
Sbjct: 153 VIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* Length = 199

 Score = 62.1 bits (150), Expect = 4e-11
 Identities = 21/146 (14%), Positives = 49/146 (33%), Gaps = 13/146 (8%)

Query: 678 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISW 737
            L     +      +  Q PR        + ++ +  V    P+N++   LS + + ++W
Sbjct: 61  QLQKKEIHLYQTFVVQLQDPREPRRQATQM-LKLQNLVIPWAPENLTLHKLSESQLELNW 119

Query: 738 EPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTS 797
               +     H+V Y+         D   +  ++  +  F L  +     Y   V +  +
Sbjct: 120 NNRFLNHCLEHLVQYRTD------WDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFN 173

Query: 798 IGDGPSSY------PITIRTHEDDPS 817
              G + +      PI   ++    +
Sbjct: 174 PLCGSAQHWSEWSHPIHWGSNTSKEN 199

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* Length = 199

 Score = 56.3 bits (135), Expect = 4e-09
 Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 6/122 (4%)

Query: 445 QALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDE 504
           Q    +      +  Q PR        +        P  AP ++ +  LS S + + W+ 
Sbjct: 63  QKKEIHLYQTFVVQLQDPREPRRQATQMLKLQNLVIPW-APENLTLHKLSESQLELNWNN 121

Query: 505 PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGP 564
               +     + V Y  D      +W  Q VD     ++  +     YT RV++  +   
Sbjct: 122 RFLNHCLE--HLVQYRTDWD---HSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLC 176

Query: 565 GP 566
           G 
Sbjct: 177 GS 178

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* Length = 199

 Score = 42.0 bits (98), Expect = 3e-04
 Identities = 19/199 (9%), Positives = 51/199 (25%), Gaps = 29/199 (14%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT--- 775
           P   V C   +   +  +W+     +     ++Y  +  +  +    +  +  +  T   
Sbjct: 1   PLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGC 60

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTN-- 833
                E+  +  + + +           +  +    +   P      +N        +  
Sbjct: 61  QLQKKEIHLYQTFVVQLQD--PREPRRQATQMLKLQNLVIPW---APENLTLHKLSESQL 115

Query: 834 ----GSNFKGGYL---------NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKG 880
                + F    L          D    + S     + ++  +     YT +V +     
Sbjct: 116 ELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPL 175

Query: 881 DGDR------SKPETIKTP 893
            G        S P    + 
Sbjct: 176 CGSAQHWSEWSHPIHWGSN 194

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* Length = 199

 Score = 41.7 bits (97), Expect = 4e-04
 Identities = 15/137 (10%), Positives = 41/137 (29%), Gaps = 12/137 (8%)

Query: 242 TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDV 301
           + Y     I T+   ++    +    F +   +       ++  +       P  AP ++
Sbjct: 48  SHYLFSEEI-TSGCQLQKKEIHLYQTFVVQLQDPREPRRQATQMLKLQNLVIPW-APENL 105

Query: 302 QVRPLSSSTMVIQWDEPETPNGQI----------TAKHHRRIGLVETYSLTGLYPNTLYY 351
            +  LS S + + W+     +              +   + +     +SL  +     Y 
Sbjct: 106 TLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYT 165

Query: 352 IWLAAQSPRGEGATTPP 368
             + ++     G+    
Sbjct: 166 FRVRSRFNPLCGSAQHW 182

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 64.5 bits (157), Expect = 5e-11
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 4/91 (4%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLT 161
              P++   P  ++ V     + + C   G P P V W    N +     +  V  + L 
Sbjct: 306 VSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSH--NAKPLSGGRATVTDSGLV 363

Query: 162 LDRVTESE--NYTCIAASVLGVIETSTIVKV 190
           +  V   +   Y C A +  G     T+V+V
Sbjct: 364 IKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 62.2 bits (151), Expect = 3e-10
 Identities = 14/107 (13%), Positives = 35/107 (32%), Gaps = 9/107 (8%)

Query: 93  VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDD 151
                +   +  P        +          + C+   +PM +  + K G+++   P+D
Sbjct: 201 GVTKDNSGYKGEPVPQYVSKDM-MAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPED 259

Query: 152 KLP----VGRNVLTLDRVTESE--NYTCIAASVLGVIETSTI-VKVQ 191
           ++          L        +   YTC   + +G  +  ++ + V 
Sbjct: 260 RITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVV 306

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 54.9 bits (132), Expect = 7e-08
 Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 7/110 (6%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRK-GQNIELTPDDKLPVGRN-V 159
             P     P  +     ++P  L C+  G+       W+K G++      +         
Sbjct: 5   KYPVLKDQPAEV-LFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGS 63

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDV 207
           L   R   S+  +Y C A +  GV  +S ++  +  Y             
Sbjct: 64  LVFLRPQASDEGHYQCFAETPAGVA-SSRVISFRKTYLIASPAKTHEKTP 112

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 Length = 395

 Score = 43.4 bits (102), Expect = 3e-04
 Identities = 19/134 (14%), Positives = 36/134 (26%), Gaps = 15/134 (11%)

Query: 92  AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSC-VAVGSPMPFVKWRKGQNIELTPD 150
           A  +V    +                +   P  L C +    P P + W+K  +      
Sbjct: 88  ASSRVISFRKTYLIASPAKTHEK-TPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNA 146

Query: 151 DKLPVGRNV-------LTLDRVTESE-----NYTCIAASVLG-VIETSTIVKVQCKYAPL 197
           D     R +       L    VT+ +      Y C A +            +++      
Sbjct: 147 DVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDN 206

Query: 198 LTLPVAPLDVKISE 211
                 P+   +S+
Sbjct: 207 SGYKGEPVPQYVSK 220

>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens} Length = 99

 Score = 59.2 bits (144), Expect = 5e-11
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 9/97 (9%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-----LPVG 156
           + PP F +       V     + +S    G P P V W +     + PD +        G
Sbjct: 3   KAPPTFKVSL-MDQSVREGQDVIMSIRVQGEPKPVVSWLRN-RQPVRPDQRRFAEEAEGG 60

Query: 157 RNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
              L +      +   YTC A +  G  +    ++V+
Sbjct: 61  LCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVR 97

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens} Length = 241

 Score = 62.6 bits (152), Expect = 6e-11
 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 9/102 (8%)

Query: 99  PVRRVPPQFSIPP---PALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDK-- 152
            V    P ++ P      LL V   + +   C A G+P P + W K G+           
Sbjct: 6   GVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGI 65

Query: 153 -LPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            L   +  L ++ V  S+  NYTC+  +  G I  +  + V 
Sbjct: 66  KLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVL 107

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens} Length = 241

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 18/119 (15%)

Query: 90  AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI---E 146
                 V +     P       PA    +L S +   C       P ++W K   +   +
Sbjct: 100 QTYTLDVLERSPHRPILQ-AGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSK 158

Query: 147 LTPDDKLPV------------GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           + PD    V                L L  V+E +   Y C A + +GV E +  + V 
Sbjct: 159 VGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVH 217

>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 59.3 bits (144), Expect = 7e-11
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 7/100 (7%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKL---PVGRN 158
             P F   P  L  V       + C   G P P + W+  G+ +      K+     G +
Sbjct: 8   FRPHFLQAPGDL-TVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVH 66

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
            L ++ VT  +   YTCIA +  G    S  + V  K + 
Sbjct: 67  SLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKESG 106

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 206

 Score = 62.0 bits (150), Expect = 7e-11
 Identities = 24/203 (11%), Positives = 46/203 (22%), Gaps = 19/203 (9%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENII--------SYELYWNDTYAKAKHHRRIGL 673
             P+ L  V        L WS     GE +            LY +  +  +        
Sbjct: 8   PAPQQLS-VLSTNMKHLLMWSPVIAPGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEG 66

Query: 674 VETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSI 733
            E      +     Y + + A       A +       +Q      P  +         +
Sbjct: 67  PECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRQSTILTRP-GMEITK-DGFHL 124

Query: 734 RISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVL 793
            I  E        G    + + +        E   +         L+ ++    Y +   
Sbjct: 125 VIELEDL------GPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAAYCVKAQ 178

Query: 794 AGTSIGDGPS--SYPITIRTHED 814
                    S  S    +    +
Sbjct: 179 TFVKAIGRYSAFSQTECVEVQGE 201

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 206

 Score = 53.2 bits (127), Expect = 6e-08
 Identities = 25/196 (12%), Positives = 55/196 (28%), Gaps = 22/196 (11%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSN-GHIVYYKLQFVETGRSDSEASIVTLKNQTS 776
             PQ +S    +   + + W P         + V Y+ ++     S              
Sbjct: 8   PAPQQLSVLSTNMKHL-LMWSPVIAPGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEG 66

Query: 777 F---VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKT- 832
               V D++     Y + V A    G   S++ I         + +     +  K+    
Sbjct: 67  PECDVTDDITATVPYNLRVRATL--GSQTSAWSILKHPFNRQSTILTRPGMEITKDGFHL 124

Query: 833 --------NGSNFKGGYL----NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKG 880
                       F   Y            +   G + +++  ++P   Y ++     +  
Sbjct: 125 VIELEDLGPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAI 184

Query: 881 D--GDRSKPETIKTPG 894
                 S+ E ++  G
Sbjct: 185 GRYSAFSQTECVEVQG 200

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 206

 Score = 52.0 bits (124), Expect = 2e-07
 Identities = 18/133 (13%), Positives = 41/133 (30%), Gaps = 11/133 (8%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE 506
           +     Y + + A       A +       +Q    T P  +++       ++    E E
Sbjct: 75  ITATVPYNLRVRATLGSQTSAWSILKHPFNRQSTILTRP-GMEITKDGFHLVI----ELE 129

Query: 507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSV--G 563
               Q      Y+ ++     +    ++V +  +   +  + P   Y ++ Q F      
Sbjct: 130 DLGPQFEFLVAYWRREPG---AEEHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGR 186

Query: 564 PGPLSAPVLVKTQ 576
               S    V+ Q
Sbjct: 187 YSAFSQTECVEVQ 199

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 206

 Score = 50.8 bits (121), Expect = 3e-07
 Identities = 24/168 (14%), Positives = 46/168 (27%), Gaps = 14/168 (8%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           AP+ + V   +    ++ W     P   +  Y V Y  +     ++          LT  
Sbjct: 9   APQQLSVLSTNMKH-LLMWSPVIAPGETVY-YSVEYQGEYESLYTSHIWIPSSWCSLTEG 66

Query: 544 ------SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVT 597
                  D+T    Y +RV+A         S       +Q        +  +      + 
Sbjct: 67  PECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRQSTILTRPGME-ITKDGFHLV 125

Query: 598 LAWSKPTHSGENIISYEL-YWNDTYAKPRDLRAVDIQETAVTLAWSKP 644
           +              + + YW         ++ V      V L   +P
Sbjct: 126 IELEDL----GPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEP 169

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 206

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 8/95 (8%), Positives = 20/95 (21%), Gaps = 4/95 (4%)

Query: 199 TLPVAPLDVKISEVTATSVRL--DWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYT 256
                 L     E+T     L  +         + V  ++ +     + ++         
Sbjct: 104 NRQSTILTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVRSGGIPVH 163

Query: 257 VRNLSPYTEYEFYIIAVNNL--GRGPPSSPAVITT 289
           +  + P   Y                 S    +  
Sbjct: 164 LETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEV 198

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 206

 Score = 40.8 bits (95), Expect = 8e-04
 Identities = 26/203 (12%), Positives = 54/203 (26%), Gaps = 27/203 (13%)

Query: 195 APLLTLPVAPLDVKISEVTATSVRLDWTYPSET--LLYYVIQYKPKAANTPYSEI----- 247
           A  + +  AP  + +       + L W+        +YY ++Y+ +  +   S I     
Sbjct: 1   ADEVAILPAPQQLSVLSTNMKHL-LMWSPVIAPGETVYYSVEYQGEYESLYTSHIWIPSS 59

Query: 248 --SGIITTYYTV-RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVR 304
             S        V  +++    Y   + A         S        ++   T P  +++ 
Sbjct: 60  WCSLTEGPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRQSTILTRP-GMEIT 118

Query: 305 PLSSSTMVIQWDEP-----------ETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIW 353
                 ++   D               P  +   K  R         L  + P   Y + 
Sbjct: 119 KDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVR--SGGIPVHLETMEPGAAYCVK 176

Query: 354 LAAQSPR--GEGATTPPIPVRTK 374
                       A +    V  +
Sbjct: 177 AQTFVKAIGRYSAFSQTECVEVQ 199

>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 6/111 (5%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN-VLTL 162
           PP     P     V +D    LSCVA GSP+P + WRK   +  T D ++    N VL +
Sbjct: 8   PPVIRQGP-VNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQI 66

Query: 163 DRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
                 +   YTCIA++  G    S  ++VQ     +   P  P D  +  
Sbjct: 67  RYAKLGDTGRYTCIASTPSGEATWSAYIEVQ--EFGVPVQPPRPTDPNLIP 115

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Length = 388

 Score = 63.8 bits (155), Expect = 1e-10
 Identities = 20/107 (18%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 92  AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKG-----QNIE 146
               + +P+    P+        LE+M+   ++L C A G P P  +W K      +   
Sbjct: 199 GRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQA 258

Query: 147 LTPDDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           +  +D++      L +      +   Y C+  + +G     T++ V 
Sbjct: 259 VVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVT 305

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Length = 388

 Score = 60.0 bits (145), Expect = 2e-09
 Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 11/115 (9%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK--GQNIELTPDDKLPVGRNVL 160
             P F   P   ++    +   + C A G+PMP + W +  G  +   P  +       L
Sbjct: 2   KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKL 61

Query: 161 TLDRVTESEN--------YTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDV 207
                   +         Y C+A +  G I  S  V V+   A      V    V
Sbjct: 62  VFPPFRAEDYRQEVHAQVYACLARNQFGSI-ISRDVHVRAVVAQYYEADVNKEHV 115

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A* Length = 388

 Score = 54.9 bits (132), Expect = 6e-08
 Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 12/92 (13%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRNVL 160
             P    I PP    V    P   +C   G+P+  V W K G+   +   +      +VL
Sbjct: 305 TAPLSAKIDPPTQ-TVDFGRPAVFTCQYTGNPIKTVSWMKDGK--AIGHSE------SVL 355

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKV 190
            ++ V + +   Y C   +     E S  +K+
Sbjct: 356 RIESVKKEDKGMYQCFVRNDRESAEASAELKL 387

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 64.2 bits (156), Expect = 1e-10
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 3/99 (3%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           V    P+ SI       V     +  +C        ++ W  GQ++ ++P  +L  G   
Sbjct: 462 VSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQLSNGNRT 521

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           LTL  VT ++   Y C   + +    +   V +   Y P
Sbjct: 522 LTLFNVTRNDARAYVCGIQNSVSANRSDP-VTLDVLYGP 559

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 60.4 bits (146), Expect = 2e-09
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 3/99 (3%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           V    P+ SI       V     +  +C        ++ W   Q++ ++P  +L  G   
Sbjct: 106 VYPELPKPSISSNNSKPVEDKDAVAFTCEPETQDATYLWWVNNQSLPVSPRLQLSNGNRT 165

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           LTL  VT ++  +Y C   + +     S  V +   Y P
Sbjct: 166 LTLFNVTRNDTASYKCETQNPVSAR-RSDSVILNVLYGP 203

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 59.6 bits (144), Expect = 3e-09
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           V   PP+  I       V  +  + L+C        ++ W   Q++ ++P  +L      
Sbjct: 284 VYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRT 343

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           LTL  VT ++   Y C   + L V  +   V +   Y P
Sbjct: 344 LTLLSVTRNDVGPYECGIQNELSVDHSDP-VILNVLYGP 381

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 58.8 bits (142), Expect = 5e-09
 Identities = 20/114 (17%), Positives = 33/114 (28%), Gaps = 11/114 (9%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           V   P   +I P           L+LSC A  +P     W          D  +      
Sbjct: 377 VLYGPDDPTISPSYT-YYRPGVNLSLSCHAASNPPAQYSWLI--------DGNIQQHTQE 427

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
           L +  +TE     YTC A +       +T+  +            +     + +
Sbjct: 428 LFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVED 481

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 54.2 bits (130), Expect = 1e-07
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 10/92 (10%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLT 161
              P   I  P     +  + LNLSC +  +P P   WR         +        VL 
Sbjct: 556 LYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRI--------NGIPQQHTQVLF 607

Query: 162 LDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           + ++T +    Y C  +++      S +  + 
Sbjct: 608 IAKITPNNNGTYACFVSNLATGRNNSIVKSIT 639

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A Length = 642

 Score = 53.0 bits (127), Expect = 3e-07
 Identities = 18/111 (16%), Positives = 32/111 (28%), Gaps = 10/111 (9%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTL 162
             P      P          LNLSC A  +P     W          +         L +
Sbjct: 201 YGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFV--------NGTFQQSTQELFI 252

Query: 163 DRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
             +T +   +YTC A +    +  +T+  +     P      +     + +
Sbjct: 253 PNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVED 303

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens} Length = 197

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNV 159
            P         +   L     LSC  VG P+P +KW +    EL    K  +      + 
Sbjct: 7   APGI-RKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRF-GKELIQSRKYKMSSDGRTHT 64

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           LT+    + +   YTCIA + +G +ETS+ + +Q
Sbjct: 65  LTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQ 98

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens} Length = 197

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 10/100 (10%)

Query: 103 VPPQFSIPPPAL--LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----G 156
             PQF    P        + S L L  + +G P+P + W  G    L   + + +     
Sbjct: 99  ATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHG-QKLLQNSENITIENTEH 157

Query: 157 RNVLTLDRVTESE---NYTCIAASVLGVIETSTIVKVQCK 193
              L +  V        Y    ++V G ++    V++Q K
Sbjct: 158 YTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQDK 197

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens} Length = 195

 Score = 60.3 bits (146), Expect = 2e-10
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGRNVL 160
              P F   P     V  ++P NLSC A G P P  + W +   + L         R  L
Sbjct: 104 EGLPYFLEEPEDR-TVAANTPFNLSCQAQGPPEPVDLLWLQD-AVPLATAPGHGPQR-SL 160

Query: 161 TLDRVTESENYTCIAASVLGVIETSTIVKVQ 191
            +  + ++ +++C A +  GV  + T     
Sbjct: 161 HVPGLNKTSSFSCEAHNAKGVTTSRTATITV 191

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens} Length = 195

 Score = 40.7 bits (95), Expect = 8e-04
 Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 17/104 (16%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSC-VAVGSPMPFVKWRK-GQNIELTPDDKL-------- 153
              F   P  +          L C + V    P V W + GQ +EL    +         
Sbjct: 2   ESPFVGNPGNI-TGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDE 60

Query: 154 ---PVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTI-VKVQ 191
               +  + L +  +  S+   Y C+         +    V ++
Sbjct: 61  QDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLE 104

>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A Length = 93

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 8/95 (8%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRN 158
           + P+       + ++      NL    +G+P P   W  G +       +L V       
Sbjct: 1   LKPKILTASRKI-KIKAGFTHNLEVDFIGAPDPTATWTVG-DSGAALAPELLVDAKSSTT 58

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            +       ++  NY     + LG  E    V VQ
Sbjct: 59  SIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93

>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 100

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 4/91 (4%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN-VLTL 162
           PP   +  PA   + +D    L C A G P+P + W K        D +  +     L +
Sbjct: 8   PPII-LQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQI 66

Query: 163 DRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             +  S+   YTC+A S  G    S ++ V 
Sbjct: 67  KNLRISDTGTYTCVATSSSGETSWSAVLDVT 97

>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens} Length = 100

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 7/97 (7%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV---GRN 158
            PP+F   P  +  +       +     G P P V W   G+ ++     K+ V   G +
Sbjct: 4   GPPRFIQVPENM-SIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLH 62

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
            L  + V  S+   Y C+A +  G    +  + V  K
Sbjct: 63  SLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAK 99

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens} Length = 527

 Score = 63.2 bits (153), Expect = 2e-10
 Identities = 8/94 (8%), Positives = 19/94 (20%), Gaps = 4/94 (4%)

Query: 103 VPPQFSIPP-PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLT 161
                +        E+        S      P     W          + K       ++
Sbjct: 323 EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFS-RKSFPCEQKGLDNGYSIS 381

Query: 162 LDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
                + +   Y   A +          + ++ K
Sbjct: 382 KFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRK 415

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens} Length = 527

 Score = 56.2 bits (135), Expect = 3e-08
 Identities = 26/208 (12%), Positives = 61/208 (29%), Gaps = 15/208 (7%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKL-PVGRNV 159
           R     ++   A +EV + + + L  +          W     ++   P   L   G   
Sbjct: 45  RPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVS 104

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSV 217
           + + ++TE++   Y     S       + +  V  +   L TL         ++     +
Sbjct: 105 MVILKMTETQAGEYLLFIQSEAT--NYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCI 162

Query: 218 RLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277
               + P   + + +   + ++       +          + L      +    A N LG
Sbjct: 163 SE--SVPEPIVEWVLCDSQGESCKEESPAVVKKEE-----KVLHELFGTDIRCCARNELG 215

Query: 278 RGPPSSPAVITTGETEPGTAPRDVQVRP 305
           R    +          P T    + ++ 
Sbjct: 216 RE--CTRLFTIDLNQTPQTTLPQLFLKV 241

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens} Length = 527

 Score = 48.9 bits (116), Expect = 5e-06
 Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 25/106 (23%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN--- 158
           R  PQ          +   S    SC + G P+P   W+K  +      +++  G     
Sbjct: 413 RRKPQV---------LAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRK 463

Query: 159 -------------VLTLDRVTESENYTCIAASVLGVIETSTIVKVQ 191
                         L +    +     C A + LG    + ++   
Sbjct: 464 ANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSP 509

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G Length = 209

 Score = 60.4 bits (146), Expect = 2e-10
 Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 13/115 (11%)

Query: 110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-----------GQNIELTPDDKLPVGRN 158
                + +  ++P+ LSC   G   P V+W+               I  + +D++     
Sbjct: 9   SSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPT 68

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
            +T   VT  +   YTC+ +   G       VK+     P       P    I  
Sbjct: 69  GITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGN 123

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G Length = 209

 Score = 53.4 bits (128), Expect = 4e-08
 Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 14/102 (13%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRK-GQNIELTPDDKLPVGRN-- 158
           VPP             + +   L+C    GSP     W K G  +   P        +  
Sbjct: 106 VPPSKPTVNI-PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSY 164

Query: 159 -------VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
                   L  D ++ S+   Y+C A +  G   TS  V+++
Sbjct: 165 VLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRME 206

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A Length = 191

 Score = 59.8 bits (145), Expect = 3e-10
 Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 5/93 (5%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV-GRNVL 160
               F   P    E        + C  V S  P + W+  G+++ L  D +  V   N L
Sbjct: 99  QKLMFKNAP-TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYL 157

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            +  + +++   Y C    +         ++V 
Sbjct: 158 QIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A Length = 191

 Score = 56.0 bits (135), Expect = 5e-09
 Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 11/117 (9%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPM-PFVKWRKGQNIELTPDD------KLPVG 156
             Q  I P    E+ +       C   G      + W      +L+P+            
Sbjct: 2   VLQVDIVPSQG-EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD 60

Query: 157 RNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
            + LT+      +   Y C+  +  G    +T V V+     +      P + K  E
Sbjct: 61  SSTLTIYNANIDDAGIYKCVVTAEDGTQSEAT-VNVKIFQKLMFKNAPTPQEFKEGE 116

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus} Length = 192

 Score = 59.4 bits (144), Expect = 3e-10
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 13/107 (12%)

Query: 90  AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP 149
           +    QV      + P+ + PP  + +++      L C  +G+P P V W KG +  L  
Sbjct: 91  SCGALQVK-----MKPKITRPPINV-KIIEGLKAVLPCTTMGNPKPSVSWIKG-DSALRE 143

Query: 150 DDKLPV-GRNVLTLDRVTESE--NYTCIAASVLGVIETSTI---VKV 190
           + ++ V     L +  V + +   Y C+A + LG   +  +   V+V
Sbjct: 144 NSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEV 190

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus} Length = 192

 Score = 58.6 bits (142), Expect = 6e-10
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 8/112 (7%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDD-KLPVGRNVLT 161
            P     P   ++ +++      C     P P + W +    I+L      +     +LT
Sbjct: 7   APVI-TTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLT 65

Query: 162 LDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
           +  V +S+   Y C A + +G    S       K  P +T P  P++VKI E
Sbjct: 66  ILSVEDSDDGIYCCTANNGVGGAVESCGALQV-KMKPKITRP--PINVKIIE 114

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} Length = 238

 Score = 60.3 bits (145), Expect = 4e-10
 Identities = 30/177 (16%), Positives = 56/177 (31%), Gaps = 15/177 (8%)

Query: 408 TLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQ------- 460
            +    +     R   ++    P+  K+         +A    +   +  ++        
Sbjct: 70  FVNAKKIEDGKVRVLVSSLTGEPLPAKEVLAKVVLRAEAKTEGSNLSVTNSSVGDGEGLV 129

Query: 461 SPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYT 520
                   T  I   T         RD +   ++   + + W EPET  G + GY +Y  
Sbjct: 130 HEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEG-LEGYILYKD 188

Query: 521 QDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
             +   +   ET         T   L  HTIY  ++ A  S G       + ++T +
Sbjct: 189 GKKVAEIGKDETSY-------TFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTAR 238

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} Length = 238

 Score = 59.6 bits (143), Expect = 7e-10
 Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 9/137 (6%)

Query: 159 VLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKY------APLLTLPVAPLDVKISEV 212
           VL  +  TE  N +   +SV         +    K            +     D K SE+
Sbjct: 103 VLRAEAKTEGSNLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEI 162

Query: 213 TATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIA 272
              +V + WT P  T    +  Y         +EI    T+Y T + L+ +T Y F I A
Sbjct: 163 NKKNVTVTWTEPETT--EGLEGYILYKDGKKVAEIGKDETSY-TFKKLNRHTIYNFKIAA 219

Query: 273 VNNLGRGPPSSPAVITT 289
             + G         + T
Sbjct: 220 KYSNGEVSSKESLTLRT 236

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} Length = 238

 Score = 56.5 bits (135), Expect = 7e-09
 Identities = 30/224 (13%), Positives = 70/224 (31%), Gaps = 46/224 (20%)

Query: 490 VRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPH 549
           V  +S   + +   + E    ++    +      +  + A      +     +   +T  
Sbjct: 61  VEAISDDGVFVNAKKIEDGKVRVLVSSLTGEPLPAKEVLAKVVLRAEAKTEGSNLSVTNS 120

Query: 550 TIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGEN 609
           ++           G       +   + + V +  RD +A +I +  VT+ W++P  +   
Sbjct: 121 SVGDGEGLVHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTE-G 179

Query: 610 IISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR 669
           +  Y LY +        +  +   ET                                  
Sbjct: 180 LEGYILYKDGKK-----VAEIGKDET---------------------------------- 200

Query: 670 RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713
                 +Y+   L  +T+Y   +AA+   GE ++   + +RT +
Sbjct: 201 ------SYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTAR 238

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} Length = 238

 Score = 50.7 bits (120), Expect = 6e-07
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 11/177 (6%)

Query: 637 VTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYI--WLAA 694
           V +   K       ++   L      AK    + +   E  +       T   +      
Sbjct: 69  VFVNAKKIEDGKVRVLVSSLTGEPLPAKEVLAKVVLRAEAKTEGSNLSVTNSSVGDGEGL 128

Query: 695 QSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKL 754
                    T  I   T   +   P ++     ++  ++ ++W  P    +   +  Y L
Sbjct: 129 VHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEP---ETTEGLEGYIL 185

Query: 755 QFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
                   D +      K++TS+   +L + T Y   + A  S G+  S   +T+RT
Sbjct: 186 Y------KDGKKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRT 236

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} Length = 238

 Score = 49.9 bits (118), Expect = 1e-06
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 14/148 (9%)

Query: 242 TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVN-------NLGRGPPSSPAVITTGETEP 294
            P      +          +  +       +V         +     +   +  T     
Sbjct: 91  EPLPAKEVLAKVVLRAEAKTEGSNLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEIV 150

Query: 295 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVET-------YSLTGLYPN 347
               RD +   ++   + + W EPET  G      ++    V         Y+   L  +
Sbjct: 151 VNPVRDFKASEINKKNVTVTWTEPETTEGLEGYILYKDGKKVAEIGKDETSYTFKKLNRH 210

Query: 348 TLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
           T+Y   +AA+   GE ++   + +RT +
Sbjct: 211 TIYNFKIAAKYSNGEVSSKESLTLRTAR 238

>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4 Length = 99

 Score = 56.5 bits (137), Expect = 4e-10
 Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 7/96 (7%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKL---PVGRNV 159
            P+      +   V   S  +     VG P P  +W K G  IE +              
Sbjct: 5   APKIFERIQSQ-TVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCE 63

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
           L +  VT  +  +    A ++ G   +   + VQ K
Sbjct: 64  LVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 99

>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* Length = 207

 Score = 59.3 bits (143), Expect = 4e-10
 Identities = 28/190 (14%), Positives = 52/190 (27%), Gaps = 17/190 (8%)

Query: 641 WSKPTHSGENIISYELYWNDTYAKAKH------HRRIGLVETYSLTGLYPNTLYYIWLAA 694
           W     +  +     LY         H      +   G V    +  +     Y + L A
Sbjct: 21  WKMNGPTNCSTELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWA 80

Query: 695 QSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPP-PVERSNGHIVYYK 753
                          +  ++V    P N++     S ++ ++W  P P +    + + Y 
Sbjct: 81  GQQLLW-----KGSFKPSEHVKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYA 135

Query: 754 LQFVETGRSD--SEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGP-S--SYPIT 808
           +              ++  L+         LK    YR  V A     +   S  S    
Sbjct: 136 VNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTK 195

Query: 809 IRTHEDDPSE 818
                 +P E
Sbjct: 196 WHNSYREPFE 205

>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* Length = 207

 Score = 56.6 bits (136), Expect = 5e-09
 Identities = 28/189 (14%), Positives = 50/189 (26%), Gaps = 18/189 (9%)

Query: 400 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAA 459
             T           L              IP      G         +     Y + L A
Sbjct: 25  GPTNCSTELRLLYQLVFLLSE----AHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWA 80

Query: 460 QSPRGEGAT-TPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITG---Y 515
                   +  P   V+ +      AP ++ V    S T+++ W  P  P+  +     Y
Sbjct: 81  GQQLLWKGSFKPSEHVKPR------APGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTY 134

Query: 516 KV-YYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSA---PV 571
            V  ++++       +    ++ +     S L     Y  RV+A+        S      
Sbjct: 135 AVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPST 194

Query: 572 LVKTQQGVP 580
                   P
Sbjct: 195 KWHNSYREP 203

>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* Length = 207

 Score = 47.0 bits (111), Expect = 7e-06
 Identities = 16/109 (14%), Positives = 29/109 (26%), Gaps = 13/109 (11%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSE------TLLYYVIQYKPK---AANTPYSEISGII 251
           P AP ++ +    + ++ L W+ P          L Y +    +   A    Y+      
Sbjct: 98  PRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEP 157

Query: 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS--SPAVITTGETEPGTAP 298
           +       L     Y   + A         S  SP+             
Sbjct: 158 SLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPST--KWHNSYREPF 204

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 62.1 bits (150), Expect = 5e-10
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 6/94 (6%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK--LPVGRNV 159
           RV P  +          +   + +SC A G+P P + W K  N  L  D    L  G   
Sbjct: 664 RVAPTITGNLENQ-TTSIGESIEVSCTASGNPPPQIMWFKD-NETLVEDSGIVLKDGNRN 721

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           LT+ RV + +   YTC A SVLG  +      ++
Sbjct: 722 LTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIE 755

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 59.0 bits (142), Expect = 6e-09
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 103 VPPQFSIPP--PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVL 160
             P  +      +L+E  +   + +    +G P P +KW K   I L  +  +  G +VL
Sbjct: 326 EKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKN-GIPLESNHTIKAG-HVL 383

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           T+  V+E +  NYT I  + +   + S +V +     P
Sbjct: 384 TIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPP 421

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 53.2 bits (127), Expect = 3e-07
 Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 15/103 (14%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-------------GQNIELTPD 150
                + P   +E+ +   L L+C A       + +                ++++    
Sbjct: 223 IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSG 282

Query: 151 DKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            ++    + LT+D VT S+   YTC A+S L   + ST V+V 
Sbjct: 283 SEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH 325

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 51.7 bits (123), Expect = 1e-06
 Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 29/136 (21%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV------- 155
             P+ ++ P   ++      ++L C A  S    + W K     L               
Sbjct: 549 RGPEITLQPD--MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNL 606

Query: 156 ----------------GRNVLTLDRVTESE--NYTCIAASVLGVIETSTI--VKVQCKYA 195
                              ++ L   +  +  +Y C+A           +  + V  + A
Sbjct: 607 DTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVA 666

Query: 196 PLLTLPVAPLDVKISE 211
           P +T  +      I E
Sbjct: 667 PTITGNLENQTTSIGE 682

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 49.0 bits (116), Expect = 7e-06
 Identities = 13/123 (10%), Positives = 31/123 (25%), Gaps = 6/123 (4%)

Query: 93  VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK 152
           V+    P   +           +    +  + + C+   S +      +       PD  
Sbjct: 118 VQDYRSP--FIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGN 175

Query: 153 --LPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVK 208
                 +   T+     S      C A       ++   + V   Y     +      ++
Sbjct: 176 RISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIE 235

Query: 209 ISE 211
           +S 
Sbjct: 236 LSV 238

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R Length = 772

 Score = 44.4 bits (104), Expect = 2e-04
 Identities = 29/212 (13%), Positives = 60/212 (28%), Gaps = 14/212 (6%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN----V 159
            P+ SI    L  +  ++ L ++C   G       W   Q+      +            
Sbjct: 31  LPRLSIQKDIL-TIKANTTLQITCR--GQRDLDWLWPNNQSGSEQRVEVTECSDGLFCKT 87

Query: 160 LTLDRVTESEN--YTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSV 217
           LT+ +V  ++   Y C              V+   +   + ++      V I+E    +V
Sbjct: 88  LTIPKVIGNDTGAYKCFYRETDLASVIYVYVQDY-RSPFIASVSDQHGVVYITENKNKTV 146

Query: 218 RLDWTYPSETLLYYVIQYKPKAANTPYS-EISGIITTYYTVRNLSPYTEYEFYIIAVNNL 276
            +        L   +    P+    P    IS      +T+ +         +  A  N 
Sbjct: 147 VIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKIND 206

Query: 277 GRGPPSSPAVITTGETEP---GTAPRDVQVRP 305
                    V+  G        +    +++  
Sbjct: 207 ESYQSIMYIVVVVGYRIYDVVLSPSHGIELSV 238

>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens} Length = 103

 Score = 56.2 bits (136), Expect = 5e-10
 Identities = 14/94 (14%), Positives = 25/94 (26%), Gaps = 8/94 (8%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNV 159
            P+ ++   +   V               P   VKW     +EL    K+      G   
Sbjct: 8   APRITLRMRSH-RVPCGQNTRFILNVQSKPTAEVKWYHN-GVELQESSKIHYTNTSGVLT 65

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           L +      +   Y  +  +  G       + V 
Sbjct: 66  LEILDCHTDDSGTYRAVCTNYKGEASDYATLDVT 99

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens} Length = 292

 Score = 60.4 bits (146), Expect = 7e-10
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN 158
            V   PP  ++ P A L  +      + C A    + F  + +  N +L    +     N
Sbjct: 181 KVIPGPPALTLVP-AELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNN 239

Query: 159 V------LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
                  L LD+V      NY+C+A++V G   TS   +V 
Sbjct: 240 RYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVV 280

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens} Length = 292

 Score = 51.5 bits (123), Expect = 5e-07
 Identities = 23/137 (16%), Positives = 39/137 (28%), Gaps = 14/137 (10%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMPFVKWRKGQNIELTPDDKLPV-GRNV 159
           + P +        + V  D    L C+         V   + +   L           + 
Sbjct: 86  KDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHG 145

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTI---VKVQCKYAPLLTLPVAPLDVKISE--- 211
            T+ R    +  +Y C A      + + +I   V+      P LTL  A L     E   
Sbjct: 146 FTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQ 205

Query: 212 ----VTATSVRLDWTYP 224
                ++  V  D    
Sbjct: 206 IVCSASSVDVNFDVFLQ 222

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens} Length = 292

 Score = 49.2 bits (117), Expect = 3e-06
 Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 12/112 (10%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLT 161
              P      P L+ V   + + L CV  GS    V+W    +   T          +L+
Sbjct: 2   GSIPVIEPSVPELV-VKPGATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSS--ILS 54

Query: 162 LDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
            +  T      Y C           +  + V+    P     V   +V + E
Sbjct: 55  TNNATFQNTGTYRCTEPGDPLGGSAAIHLYVK---DPARPWNVLAQEVVVFE 103

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4 Length = 212

 Score = 58.8 bits (142), Expect = 8e-10
 Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 14/120 (11%)

Query: 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-----------NIELTPDDKL 153
                    + +V  +  + L+C   G   P V+W+  Q            I     D++
Sbjct: 2   GSVYTAQSDV-QVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRV 60

Query: 154 PVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
               + +T   VT  +   YTC+ +   G       + +     P       P  V I  
Sbjct: 61  TFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGN 120

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4 Length = 212

 Score = 53.0 bits (127), Expect = 8e-08
 Identities = 23/103 (22%), Positives = 31/103 (30%), Gaps = 15/103 (14%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRK-GQNIELTPDDKLPVGRNV- 159
           VPP           V + +   L+C    GSP     W K G ++      K     N  
Sbjct: 103 VPPSK-PTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSS 161

Query: 160 ---------LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
                    L  D VT  +   Y C A +  G    S    + 
Sbjct: 162 FTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMD 204

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus} Length = 190

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 14/102 (13%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGR---- 157
           +  P  +    +           + C +VG P P   WRK +N  +  +     GR    
Sbjct: 90  KAAPDITGHKRSE-NKNEGQDAMMYCKSVGYPHPEWMWRKKEN-GVFEEISNSSGRFFII 147

Query: 158 -----NVLTLDRVTESE---NYTCIAASVLGVIETSTIVKVQ 191
                  L +  +  +E    Y C A + +G    ST+++V+
Sbjct: 148 NKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus} Length = 190

 Score = 57.2 bits (138), Expect = 2e-09
 Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 12/114 (10%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFV--KWRKGQNIELTPDDKLPVGRNV 159
           +  P+  +    ++      P+ L C    S    +   W K   +ELT   K       
Sbjct: 1   QNEPRI-VTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKN-GVELTATRK-NASNME 57

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
             +++    +   Y C+   V    + +  ++V+   AP +T          +E
Sbjct: 58  YRINKPRAEDSGEYHCVYHFV-SAPKANATIEVK--AAPDIT--GHKRSENKNE 106

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} Length = 289

 Score = 59.6 bits (144), Expect = 1e-09
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 9/114 (7%)

Query: 86  RGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI 145
           R   +  +    + V   PPQ  + P  L   +      + C A  + + F    K  + 
Sbjct: 168 RESTSTGIWLKVNRVHPEPPQIKLEPSKL-VRIRGEAAQIVCSATNAEVGFNVILKRGDT 226

Query: 146 ELTPDDKLPVGRNV------LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           +L          N       L+L+ V   +   Y+C+A++ +G    +   +V 
Sbjct: 227 KLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVV 280

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} Length = 289

 Score = 50.3 bits (120), Expect = 1e-06
 Identities = 14/114 (12%), Positives = 27/114 (23%), Gaps = 7/114 (6%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPM-PFVKWRK-GQNIELTPDDKLPVGRNV 159
           + P          + V+      L C+     +   V   + G    L            
Sbjct: 86  KDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRG 145

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTI---VKVQCKYAPLLTLPVAPLDVK 208
             + +    +   Y C          ++ I   V       P + L  + L   
Sbjct: 146 FIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRI 199

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} Length = 289

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 25/111 (22%), Positives = 37/111 (33%), Gaps = 12/111 (10%)

Query: 104 PPQFSI-PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTL 162
            P   I P    L V     + L CV+ GS    V+W    +   T D + P     LT 
Sbjct: 2   DPAPVIEPSGPELVVEPGETVTLRCVSNGS----VEWDGPISPYWTLDPESPGS--TLTT 55

Query: 163 DRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
              T      Y C          T+  + V+    P  +  +   +V + E
Sbjct: 56  RNATFKNTGTYRCTELEDPMAGSTTIHLYVK---DPAHSWNLLAQEVTVVE 103

>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ... Length = 184

 Score = 57.7 bits (139), Expect = 1e-09
 Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 11/94 (11%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           V+ +    +        ++    L L+  +     P V+ R        P  K   G   
Sbjct: 94  VQLLVFGLTANSDT--HLLQGQSLTLTLESPPGSSPSVQCRS-------PRGKNIQGGKT 144

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           L++ ++   +   +TC        +E    + V 
Sbjct: 145 LSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 178

>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens} Length = 99

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 9/99 (9%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--- 155
           P+    P           V  DS    +  A G P P   W K     +T   K  +   
Sbjct: 2   PIS-SKPVIVTGLQDT-TVSSDSVAKFAVKATGEPRPTAIWTKD-GKAITQGGKYKLSED 58

Query: 156 -GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            G   L + +   S+   YTC   +  G + +S  + ++
Sbjct: 59  KGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIK 97

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens} Length = 211

 Score = 57.9 bits (139), Expect = 1e-09
 Identities = 23/205 (11%), Positives = 47/205 (22%), Gaps = 18/205 (8%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL----YWNDTYAKAKHHRRI-GLVET 676
            KP+ ++    +     L W        N   Y +    Y    +   +       L   
Sbjct: 9   LKPQRVQ-FQSRNFHNILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCD 67

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRIS 736
            +         YY  + A S       +              PP     +   S  + + 
Sbjct: 68  LTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDPPVMNITQVNGSLLVILH 127

Query: 737 WEPPPVERSNGHIV--------YYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEY 788
               P        V         Y++  +       +          +  ++ L   + Y
Sbjct: 128 APNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEG--AHRAVEIEALTPHSSY 185

Query: 789 RIWVLAGTSIGDGPS--SYPITIRT 811
            +       + D  S  S    +  
Sbjct: 186 CVVAEIYQPMLDRRSQRSEERCVEI 210

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens} Length = 211

 Score = 52.1 bits (124), Expect = 1e-07
 Identities = 29/235 (12%), Positives = 58/235 (24%), Gaps = 41/235 (17%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P+ VQ +  +    ++QW       G  + Y V Y   +      W+ +          
Sbjct: 10  KPQRVQFQSRNFHN-ILQWQPGRALTGNSSVYFVQY---KIYGQRQWKNKEDCWGTQELS 65

Query: 544 SDLT-----PHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTL 598
            DLT         Y  RV+A ++      S              P  +  +     ++ +
Sbjct: 66  CDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDPPVMN-ITQVNGSLLV 124

Query: 599 AWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 658
               P           +   D Y                              + Y ++ 
Sbjct: 125 ILHAPNLPYRYQKEKNVSIEDYYE-----------------------------LLYRVFI 155

Query: 659 NDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR--GEGATTPPIPVRT 711
            +   + +     G      +  L P++ Y +      P        +    V  
Sbjct: 156 INNSLEKEQKVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSEERCVEI 210

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens} Length = 211

 Score = 49.0 bits (116), Expect = 1e-06
 Identities = 19/148 (12%), Positives = 39/148 (26%), Gaps = 19/148 (12%)

Query: 442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQ 501
              +       YY  + A S       +               P  + +  ++ S +V  
Sbjct: 68  LTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDPP-VMNITQVNGSLLV-I 125

Query: 502 WDEPETPNGQITG------------YKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPH 549
              P  P                  Y+V+   +        +      ++   I  LTPH
Sbjct: 126 LHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSL---EKEQKVYEGAHRAVEIEALTPH 182

Query: 550 TIYTIRVQAFTSV--GPGPLSAPVLVKT 575
           + Y +  + +  +       S    V+ 
Sbjct: 183 SSYCVVAEIYQPMLDRRSQRSEERCVEI 210

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens} Length = 211

 Score = 47.1 bits (111), Expect = 7e-06
 Identities = 29/206 (14%), Positives = 59/206 (28%), Gaps = 33/206 (16%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD---SEASIVTLKNQ 774
             PQ V  +  +  +I + W+P       G+   Y +Q+   G+      E    T +  
Sbjct: 9   LKPQRVQFQSRNFHNI-LQWQPGRA--LTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELS 65

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED---DPSEVCPTQNDF----- 826
                +       Y   V A ++      S         +   DP  +  TQ +      
Sbjct: 66  CDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDPPVMNITQVNGSLLVI 125

Query: 827 -----------RKNKKTNGSNFKGGYL------NDPMRFDVSDGGALELNVTGLQPDTIY 869
                      ++   +    ++  Y       +      V +G    + +  L P + Y
Sbjct: 126 LHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEGAHRAVEIEALTPHSSY 185

Query: 870 TIQVAALT--RKGDGDRSKPETIKTP 893
            +              RS+   ++ P
Sbjct: 186 CVVAEIYQPMLDRRSQRSEERCVEIP 211

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens} Length = 211

 Score = 42.1 bits (98), Expect = 3e-04
 Identities = 29/243 (11%), Positives = 55/243 (22%), Gaps = 50/243 (20%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSE---TLLYYVIQYKPKAAN--TPYSEISGIITTYY 255
            + P  V+       ++ L W            Y +QYK           +  G      
Sbjct: 8   SLKPQRVQFQSRNFHNI-LQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSC 66

Query: 256 --TVRNLSPYTEYEFYIIAVNNLGRGP-PSSPAVITTGETEPGTAPRDVQVRPLSSSTMV 312
             T         Y   + A +         +P      ET+    P  + +  ++ S +V
Sbjct: 67  DLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKID--PPVMNITQVNGSLLV 124

Query: 313 IQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVR 372
                P  P      K    + + + Y L        Y +++                  
Sbjct: 125 -ILHAPNLPYRYQKEK---NVSIEDYYELL-------YRVFI-----INNSLEKEQKVYE 168

Query: 373 TKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR--GEGATTPPIP 430
                                       +  L P++ Y +      P        +    
Sbjct: 169 GAH---------------------RAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSEERC 207

Query: 431 VRT 433
           V  
Sbjct: 208 VEI 210

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens} Length = 423

 Score = 60.1 bits (145), Expect = 1e-09
 Identities = 7/96 (7%), Positives = 19/96 (19%), Gaps = 3/96 (3%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV 159
           +       +       E+        S      P     W          + K       
Sbjct: 321 IVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFS-RKSFPCEQKGLDNGYS 379

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
           ++     + +   Y   A +          + ++  
Sbjct: 380 ISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSG 415

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens} Length = 423

 Score = 57.4 bits (138), Expect = 1e-08
 Identities = 31/219 (14%), Positives = 65/219 (29%), Gaps = 17/219 (7%)

Query: 93  VRQVADPVRRVPPQFS--IPPPALLEVMLDSPLNLSCVAVGSPMPFVKW-RKGQNIELTP 149
                D    + PQ S  +   A +EV + + + L  +          W  K  ++   P
Sbjct: 34  SESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQP 93

Query: 150 DDKLPV-GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLD 206
              L   G   + + ++TE++   Y     S          V ++      L   +    
Sbjct: 94  HFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNT----LLYTLRRPY 149

Query: 207 VKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEY 266
            +  E     V +  + P   + + +   + ++       +         +  L   T+ 
Sbjct: 150 FRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEK--VLHELFG-TDI 206

Query: 267 EFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRP 305
                A N LGR    +          P T    + ++ 
Sbjct: 207 R--CCARNELGR--ECTRLFTIDLNQTPQTTLPQLFLKV 241

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens} Length = 423

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 18/121 (14%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKG---------QNIELTPDDK 152
           +        P L  + +  PL + C AV  +    + W              +     ++
Sbjct: 226 LNQTPQTTLPQLF-LKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNR 284

Query: 153 LPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKIS 210
             +      +  V  ++   YTC ++        S +V +  K    +    +  D +I 
Sbjct: 285 TMIRILFAFVSSVARNDTGYYTCSSSKHPS---QSALVTIVEK--GFINATNSSEDYEID 339

Query: 211 E 211
           +
Sbjct: 340 Q 340

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A Length = 212

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 6/101 (5%)

Query: 95  QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP 154
              D      P  +  P     + +   + ++C A+G+P P + W K Q      + +  
Sbjct: 101 YEGDKTPAGFPVITQGP-GTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYS 159

Query: 155 VGRNVLTLDRVTESE--NYTCIAASVLGVIETST---IVKV 190
           +    L ++   E +   Y C+A + +G   +      VKV
Sbjct: 160 LKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKV 200

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A Length = 212

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 13/121 (10%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRN--- 158
            PP+    P     V +    +  C A G P P + WRK G+ +  T      + +    
Sbjct: 5   HPPEIIRKPQNQ-GVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGI 63

Query: 159 -VLTLDRVTESE---NYTCIAASVLG-VIETSTIVKVQCKYAPLLTLPV---APLDVKIS 210
            +L ++ V        Y C+A + +G  +     + +          PV    P    I 
Sbjct: 64  SILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIE 123

Query: 211 E 211
            
Sbjct: 124 V 124

>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens} Length = 207

 Score = 57.3 bits (138), Expect = 2e-09
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 8/126 (6%)

Query: 71  AARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAV 130
            A +H+ +     + +     A  Q  + +R+  P F        EV  +  + L C   
Sbjct: 84  KATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSW--EVTGECNVLLKCKVA 141

Query: 131 GSPMPF-VKWRKGQNIELTPDDK--LPVGRNVLTLDRVTESE--NYTCIAASVLGVIETS 185
                  + W K    E++ D+K     G   L +   ++ +   Y  I     G  ++ 
Sbjct: 142 NIKKETHIVWYKD-EREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSR 200

Query: 186 TIVKVQ 191
             +  +
Sbjct: 201 LKLVDE 206

>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens} Length = 207

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 12/110 (10%), Positives = 29/110 (26%), Gaps = 7/110 (6%)

Query: 125 LSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRNV----LTLDRVTESE--NYTCIAAS 177
                  S    V +    + I   P  K+ + RN     + ++++ + +   YT     
Sbjct: 23  WMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82

Query: 178 VLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET 227
                 ++ ++                 +    +       L W    E 
Sbjct: 83  GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGEC 132

>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 54.3 bits (131), Expect = 3e-09
 Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 5/90 (5%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLD 163
                +   +   V     L L C         + W +   ++L   ++  +    + + 
Sbjct: 3   SGSSGVEVESF-LVHPGDLLQLRCRLRDDV-QSINWLRD-GVQLAESNRTRITGEEVEVQ 59

Query: 164 RVTESE--NYTCIAASVLGVIETSTIVKVQ 191
               ++   Y C+ +S  G   T   V V 
Sbjct: 60  DSVPADSGLYACVTSSPSGSDTTYFSVNVS 89

>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 114

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 8/107 (7%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNV 159
            PQ  I  P   +V     + L     G+      W K    ++   + + V      + 
Sbjct: 7   GPQI-IQFPEDQKVRAGESVELFGKVTGTQPITCTWMKF-RKQIQESEHMKVENSENGSK 64

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP 204
           LT+    +     YT +  + LG  +    + V  K  P    P  P
Sbjct: 65  LTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAGTPSGP 111

>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* Length = 223

 Score = 57.5 bits (138), Expect = 3e-09
 Identities = 21/187 (11%), Positives = 54/187 (28%), Gaps = 11/187 (5%)

Query: 637 VTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQS 696
           +T A+  P  +  N    E        + K      L E Y +       +    +  + 
Sbjct: 39  LTCAFEDPDVNTTN---LEFEICGALVEVKCLNFRKLQEIYFIETKKFLLIGKSNICVKV 95

Query: 697 PRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSST-SIRISWEPPPVERSNGHIVYYKLQ 755
                 +     +     V    P ++S           +++    +++    ++ + + 
Sbjct: 96  ---GEKSLTCKKIDLTTIVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVA 152

Query: 756 FVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPS----SYPITIRT 811
           + +    +    +     + + +  +L+    Y I V +             S     RT
Sbjct: 153 YRQEKDENKWTHVNLSSTKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRT 212

Query: 812 HEDDPSE 818
            E + S 
Sbjct: 213 PEINNSS 219

>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* Length = 223

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 11/111 (9%)

Query: 201 PVAPLDVKIS-EVTATSVRLDWTYPSE-----TLLYYVIQYKPKAANTPYSEISGIITTY 254
           P AP D+ +     A    + +           +L + + Y+ +     ++ ++   T  
Sbjct: 113 PEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNLSSTKL 172

Query: 255 -YTVRNLSPYTEYEFYIIA-VNNLGRGPP---SSPAVITTGETEPGTAPRD 300
               R L P   YE  + +  ++  +G     S      T E    +   D
Sbjct: 173 TLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEINNSSGEMD 223

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens} Length = 339

 Score = 58.5 bits (141), Expect = 3e-09
 Identities = 21/118 (17%), Positives = 34/118 (28%), Gaps = 23/118 (19%)

Query: 95  QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA---VGSPMPFVKWRK--GQNIELTP 149
           ++        P   I P   +   L S L + C      G+P+  + W      +IE   
Sbjct: 217 RIKKKKEETIPVI-ISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAY 275

Query: 150 DDK--------------LPVGRNVLTLDRVTESE---NYTCIAASVLGVIETSTIVKV 190
                                   L  D VT  +   ++ C+  + L      T VK 
Sbjct: 276 PGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens} Length = 339

 Score = 52.0 bits (124), Expect = 4e-07
 Identities = 17/120 (14%), Positives = 33/120 (27%), Gaps = 13/120 (10%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSC-------VAVGSPMPFVKWRK-GQNIELTPDDK--L 153
                         +   P+ L C        A  SP   + W K      +  +++  +
Sbjct: 18  CRFRGRHYKREF-RLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRM 76

Query: 154 PVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211
                 L L    + +   Y C   +     + S  ++V       L     P  + +S 
Sbjct: 77  WAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLST 136

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus} Length = 329

 Score = 58.3 bits (140), Expect = 4e-09
 Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 18/123 (14%)

Query: 87  GRLAHAVRQVADPVRRVPPQ---FSIPPPALLEVMLDSPLNLSCVAVGSPMP----FVKW 139
                 V      +  +P Q   F +     + V +  P N++C AV + +      + W
Sbjct: 207 RIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDW 266

Query: 140 RK--------GQNIELTPDDKLPVGRNVLTLDRVTES---ENYTCIAASVLGVIETSTIV 188
                        +         +    L  + VTE      YTC   +       +T V
Sbjct: 267 ENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTV 326

Query: 189 KVQ 191
            ++
Sbjct: 327 VLE 329

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus} Length = 329

 Score = 49.4 bits (117), Expect = 3e-06
 Identities = 21/132 (15%), Positives = 36/132 (27%), Gaps = 7/132 (5%)

Query: 91  HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSC-VAVGSPMPFVKWRKGQNIELTP 149
             V+ +     R PP   IP    L       ++L C +        + W K     +  
Sbjct: 115 DCVQGIVRSHIRKPPSC-IPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIID 173

Query: 150 DDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDV 207
             K       L +      +   Y C        I+   +V        L  +P      
Sbjct: 174 GTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRC---KILTVIPSQDHRF 230

Query: 208 KISEVTATSVRL 219
           K+      +V +
Sbjct: 231 KLILDPKINVTI 242

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens} Length = 312

 Score = 57.7 bits (139), Expect = 5e-09
 Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 10/125 (8%)

Query: 72  ARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG 131
             S   L      +  + A   RQ  + +R+  P F        EV  +  + L C    
Sbjct: 192 NHSTVVLVGDVFKKLQKEAEFQRQ--EWIRKQGPHFVEYLS--WEVTGECNVLLKCKVAN 247

Query: 132 SPMPF-VKWRKGQNIELTPDDKLPV--GRNVLTLDRVTESE--NYTCIAASVLGVIETST 186
                 + W K    E++ D+K     G   L +   ++ +   Y  I     G  ++  
Sbjct: 248 IKKETHIVWYKD-EREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRL 306

Query: 187 IVKVQ 191
            +  +
Sbjct: 307 KLVDE 311

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens} Length = 312

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRN 158
           + P         ++      LN  C    +P     W K   +      +L V     + 
Sbjct: 2   IDPFT-KEVVVNVDDDGVISLNFEC-DKMTPKSEFSWSKD-YVSTEDSPRLEVESKGNKT 58

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLP 201
            +T   +   +   Y+C      G+  +  I + + K    L+  
Sbjct: 59  KMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHE 103

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens} Length = 312

 Score = 51.1 bits (122), Expect = 6e-07
 Identities = 11/132 (8%), Positives = 30/132 (22%), Gaps = 9/132 (6%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--- 155
              + P        A+  +              S    V +      E+    K  +   
Sbjct: 102 HEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFN-EKEIFEGPKYKMHID 160

Query: 156 ---GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKIS 210
              G   + ++++ + +   YT           ++ ++                 +    
Sbjct: 161 RNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRK 220

Query: 211 EVTATSVRLDWT 222
           +       L W 
Sbjct: 221 QGPHFVEYLSWE 232

>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E Length = 363

 Score = 57.9 bits (139), Expect = 7e-09
 Identities = 29/234 (12%), Positives = 62/234 (26%), Gaps = 29/234 (12%)

Query: 106 QFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV 165
            F +   +   ++    L L+  +     P V+ R        P  K   G   L++ ++
Sbjct: 97  VFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRS-------PRGKNIQGGKTLSVSQL 149

Query: 166 TESE--NYTCIAASVLGVIETSTIVKVQCKY-APLLTLPVAPLDVKIS-------EVTAT 215
              +   +TC        +E    + V     A  +        V+ S       E    
Sbjct: 150 ELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTG 209

Query: 216 SVRLDWTYPSETLLYYVIQY--------KPKAANTPYSEISGIITTYYTVRNLSPYTE-- 265
           S  L W     +     I +          +    P  ++   +  + T+    P     
Sbjct: 210 SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGS 269

Query: 266 YEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPE 319
               +      G+       V+              +V   +S  +++      
Sbjct: 270 GNLTLALEAKTGKLHQEVNLVVMRATQLQKNLT--CEVWGPTSPKLMLSLKLEN 321

>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X Length = 122

 Score = 53.2 bits (127), Expect = 1e-08
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 16/110 (14%)

Query: 97  ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-------------GQ 143
           ADP  R+     + P   +E+ +   L L+C A       + +                +
Sbjct: 1   ADPGYRIYD-VVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNR 59

Query: 144 NIELTPDDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           +++     ++    + LT+D VT S+   YTC A+S L   + ST V+V 
Sbjct: 60  DLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH 109

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 Length = 88

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 6/90 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNL 260
           P AP ++  +  T +S+ L WT  ++     V  Y         + ++G   T  T+  L
Sbjct: 4   PTAPTNLASTAQTTSSITLSWTASTDN--VGVTGYDVYNGTALATTVTG---TTATISGL 58

Query: 261 SPYTEYEFYIIAVNNLG-RGPPSSPAVITT 289
           +  T Y F + A +  G     S+   + T
Sbjct: 59  AADTSYTFTVKAKDAAGNVSAASNAVSVKT 88

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 Length = 88

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 11/94 (11%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           TAP ++     ++S++ + W    T N  +TGY VY     +L  +   T         T
Sbjct: 5   TAPTNLASTAQTTSSITLSWTAS-TDNVGVTGYDVY--NGTALATTVTGTT-------AT 54

Query: 543 ISDLTPHTIYTIRVQAFTSVG-PGPLSAPVLVKT 575
           IS L   T YT  V+A  + G     S  V VKT
Sbjct: 55  ISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 Length = 88

 Score = 41.5 bits (98), Expect = 7e-05
 Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE--TYSLTG 681
           P +L +     +++TL+W+  T     +  Y++Y                V   T +++G
Sbjct: 7   PTNLASTAQTTSSITLSWTAST-DNVGVTGYDVYNGTA--------LATTVTGTTATISG 57

Query: 682 LYPNTLYYIWLAAQSPRG-EGATTPPIPVRT 711
           L  +T Y   + A+   G   A +  + V+T
Sbjct: 58  LAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88

>2csp_A RIM-BP2, RIM binding protein 2; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 52.8 bits (126), Expect = 2e-08
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 6/126 (4%)

Query: 702 ATTPPIPVRTKQYVPGAPPQNVSCEP-LSSTSIRISWEPP---PVERSNGHIVYYKLQFV 757
           + +  +   T    P APPQ+V+ +  ++  +IR+SW PP   P   SNG  V     + 
Sbjct: 3   SGSSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYA 62

Query: 758 ETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
           +  R           + T+  L  L+      + V   ++ G+   S    +      P 
Sbjct: 63  KGQRVAEVIFPTA--DSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPP 120

Query: 818 EVCPTQ 823
              P+ 
Sbjct: 121 TPHPSG 126

>2csp_A RIM-BP2, RIM binding protein 2; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 52.1 bits (124), Expect = 4e-08
 Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 467 ATTPPIPVRTKQYEPGTAPRDVQVRP-LSSSTMVIQWDEPETPN------GQITGYKVYY 519
           + +  +   T    P   P+DV V+  ++ +T+ + W  P            +TGY VY 
Sbjct: 3   SGSSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYA 62

Query: 520 TQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGV 579
              +   +               +  L       + V+  ++ G    SA   V  +  V
Sbjct: 63  KGQRVAEVIFPTADST----AVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLV 118

Query: 580 PSQPR 584
           P  P 
Sbjct: 119 PPTPH 123

>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4 Length = 118

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRNV-- 159
            PP+      +L E  L     +  V  G+P P + W   GQ +  +    +   +    
Sbjct: 7   YPPRVV----SLEEPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEI 62

Query: 160 ----LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTL-PVAPLDV 207
               L  ++ T     NYT IA + LG    +       +  P+  + P  P+ V
Sbjct: 63  SEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEVSPTPPITV 117

>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus} Length = 95

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 4/90 (4%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTL 162
             P         L V     L L C         + W +   ++L   ++  +    + +
Sbjct: 7   AQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRD-GVQLVESNRTRITGEEVEV 64

Query: 163 DRVTESE--NYTCIAASVLGVIETSTIVKV 190
                ++   Y C+ +S  G   T   V V
Sbjct: 65  RDSIPADSGLYACVTSSPSGSDTTYFSVNV 94

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A* Length = 524

 Score = 56.2 bits (135), Expect = 3e-08
 Identities = 17/125 (13%), Positives = 41/125 (32%), Gaps = 15/125 (12%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGR 157
           P  +  P  S+   +   +       ++C            W++  N +    +K     
Sbjct: 206 PAFKAVPVVSVSKASY-LLREGEEFTVTCTIKDVSSSVYSTWKRE-NSQTKLQEKYNSWH 263

Query: 158 N---------VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLD 206
           +          LT+     ++   + C A +  G    +T ++V  K   +   P+    
Sbjct: 264 HGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDK-GFINIFPMINTT 322

Query: 207 VKISE 211
           V +++
Sbjct: 323 VFVND 327

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A* Length = 524

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 13/105 (12%)

Query: 102 RVPPQFSIPP--PALLEVMLDSPLNLSCVAVGSPMP-FVKWRK-GQNIELTPDDKLPV-- 155
                 +I P     + V     ++L       P P   +W    +      +D      
Sbjct: 308 VDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSEN 367

Query: 156 -----GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
                  + L L R+  +E   YT + ++       +  V V  K
Sbjct: 368 ESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTK 412

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A* Length = 524

 Score = 48.5 bits (115), Expect = 8e-06
 Identities = 15/98 (15%), Positives = 23/98 (23%), Gaps = 17/98 (17%)

Query: 111 PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN------------ 158
            P +L         L CVA G P P + W      E      +                 
Sbjct: 412 KPEILTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGK 471

Query: 159 ---VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
                ++D           C A + +G          +
Sbjct: 472 LVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFK 509

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A* Length = 524

 Score = 45.8 bits (108), Expect = 6e-05
 Identities = 17/143 (11%), Positives = 41/143 (28%), Gaps = 17/143 (11%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVL 160
           R P +  +     L    D+   + C      +     +  Q   L  D +     +  +
Sbjct: 112 RDPAKLFLVDR-SLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGI 170

Query: 161 TLDRVTESEN---YTCIAASVLGVIETSTI---VKVQCKYAPLLTLPVAPLDVKISE--- 211
            +  V  + +     C        + +      V+   K  P++++  A   ++  E   
Sbjct: 171 MIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFT 230

Query: 212 ----VTATSVRLD--WTYPSETL 228
               +   S  +   W   +   
Sbjct: 231 VTCTIKDVSSSVYSTWKRENSQT 253

>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477

 Score = 55.9 bits (135), Expect = 3e-08
 Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 5/93 (5%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK--GQNIELTPDDKLPVGRN-VL 160
             +        + V     +   C A G P P + W       +    + +L V  +  L
Sbjct: 384 RARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTL 443

Query: 161 TLDRVTESEN--YTCIAASVLGVIETSTIVKVQ 191
            +      +N  Y CIAA+  G       + V+
Sbjct: 444 EVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVR 476

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4 Length = 450

 Score = 56.0 bits (134), Expect = 3e-08
 Identities = 24/105 (22%), Positives = 34/105 (32%), Gaps = 8/105 (7%)

Query: 87  GRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIE 146
           G+L H  +     V   P       P       +S     C A G+P+P +K  K     
Sbjct: 352 GQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFP 411

Query: 147 LTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQ 191
           L   + + V R+            Y C A S  G +     V V 
Sbjct: 412 LPIGESVTVTRD--------LEGTYLCRARSTQGEVTREVTVNVL 448

>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B* Length = 349

 Score = 54.9 bits (131), Expect = 5e-08
 Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 21/120 (17%)

Query: 93  VRQVADPVRRVPPQFSIPP-PALLEVMLDSPLNLSCVAV----GSPMPFVKWRK-GQNIE 146
           V+ V  P   VPP    P    + E      L + C             V W   G+  +
Sbjct: 213 VKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPD 272

Query: 147 -LTPDDKLPVGRN-----------VLTLDRVTESE---NYTCIAASVLGVIETSTIVKVQ 191
            +T D  +    +           +L++ +VT  +   +Y C A S  G +  +  VK +
Sbjct: 273 DITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332

>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 115

 Score = 51.2 bits (123), Expect = 5e-08
 Identities = 17/100 (17%), Positives = 30/100 (30%), Gaps = 13/100 (13%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--- 155
            V+       I     ++V   S     C    +    V W       L  ++   +   
Sbjct: 8   LVQGRRVHI-IEDLEDVDVQEGSSATFRCRISPANYEPVHWFLD-KTPLHANELNEIDAQ 65

Query: 156 --GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             G +VLTL ++   +       A    G    S  ++V 
Sbjct: 66  PGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVT 101

>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A Length = 137

 Score = 51.6 bits (123), Expect = 5e-08
 Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 19/119 (15%)

Query: 91  HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD 150
           H       P       F +  P   +  +   + L C AVGSP+P ++W           
Sbjct: 8   HHHSSGLVPRGSHMAGF-VQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDIC 66

Query: 151 DKLPVGRN----------------VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            +L  G                   +++D + E +   Y C A++       +   +V+
Sbjct: 67  SQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVK 125

>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X Length = 214

 Score = 53.2 bits (127), Expect = 6e-08
 Identities = 15/94 (15%), Positives = 32/94 (34%), Gaps = 5/94 (5%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRN-V 159
            V P  +          + +   L C    GS     +W+K  + +  P   L    + V
Sbjct: 119 LVKPSGT-RCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPV 177

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           +++   +      Y+C   + +G  +    + V 
Sbjct: 178 ISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A* Length = 217

 Score = 52.9 bits (127), Expect = 7e-08
 Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 15/105 (14%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRK-GQNIELTPDDKLPVGR 157
           +  +   F + P     V       L C    G P P + W K G  ++           
Sbjct: 104 IAVLRDDFRVEP-KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASS 162

Query: 158 NV-------LTLDRVTESE--NYTCIAASVLGVIETST---IVKV 190
            V       L +  V   +  NY CIA +++G  E+S    IV+V
Sbjct: 163 RVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A* Length = 217

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 11/103 (10%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDK----L 153
             +   P+    P  L  V  + P  L+C   G P P ++W K G+ +            
Sbjct: 4   AGQYQSPRIIEHPTDL-VVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQF 62

Query: 154 PVG----RNVLTLDRVTESENYTCIAASVLGVIET-STIVKVQ 191
             G       +   +  +   Y C+A + +G   +    +++ 
Sbjct: 63  KDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIA 105

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A Length = 212

 Score = 52.9 bits (127), Expect = 8e-08
 Identities = 27/151 (17%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 61  NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADP--------------------- 99
            G+         RSH  L     L   R+ H  +   D                      
Sbjct: 46  GGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASL 105

Query: 100 -VRRVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGR 157
            V  +   F   P + + V +  P  + C    G P P + W+K  +     D+++ +  
Sbjct: 106 EVAILRDDFRQNP-SDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRG 164

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETST 186
             L +    +S+   Y C+  +++G  E+  
Sbjct: 165 GKLMITYTRKSDAGKYVCVGTNMVGERESEV 195

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A Length = 212

 Score = 50.6 bits (121), Expect = 4e-07
 Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 14/109 (12%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIE-----------L 147
               PP+    P  L  V    P  L+C A G P P ++W K G+ +E           L
Sbjct: 5   QEDFPPRIVEHPSDL-IVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRML 63

Query: 148 TPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAP 196
            P   L   R V       +   Y C+A + LG   +     ++     
Sbjct: 64  LPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHD-ASLEVAILR 111

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 3sku_E* 2l7j_A Length = 331

 Score = 54.0 bits (129), Expect = 1e-07
 Identities = 27/196 (13%), Positives = 54/196 (27%), Gaps = 22/196 (11%)

Query: 19  PLPPLIPGYILVT-EPGTAPRDVQVRPLSSS---TMVIQW----DEPETPNGQITHPPTR 70
           P   +     ++  + G   + +     S++     V+ W                  T 
Sbjct: 131 PTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTV 190

Query: 71  AARSHARLAAQSVLRRGRLA----HAVRQVADPVR---RVPPQFSIPPPALLEVMLDSPL 123
              S  RL       +  LA    + + +  + +    +  P+ +I        +    +
Sbjct: 191 TVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDV 250

Query: 124 NLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGRNVLTLDRVTESEN--YTCIAASVLG 180
            L+C A  +P      W         P       R +     +  S    Y C A + +G
Sbjct: 251 KLTCKADANPPATEYHWTTLNGSL--PKGVEAQNRTLFFKGPINYSLAGTYICEATNPIG 308

Query: 181 VIETSTIVKVQCKYAP 196
                  V +    A 
Sbjct: 309 TRSGQVEVNIT--EAA 322

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} Length = 104

 Score = 50.1 bits (119), Expect = 1e-07
 Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 3/94 (3%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           +  +   DV    ++ATS+ L W    +E+   Y  +          +           +
Sbjct: 6   SGAIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETDSSNLNVS--EPRAVI 63

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
             L   T Y   +  V     G P    V T   
Sbjct: 64  PGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPV 97

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} Length = 104

 Score = 42.0 bits (98), Expect = 7e-05
 Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 6/84 (7%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
               DV    +S++++ + W   +  +     YK++   +         + +  +     
Sbjct: 9   IQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD------SSNLNVSEPRAV 62

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGP 566
           I  L   T Y I V        G 
Sbjct: 63  IPGLRSSTFYNITVCPVLGDIEGT 86

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} Length = 104

 Score = 39.7 bits (92), Expect = 4e-04
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 11/104 (10%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
              +V+   +S+TS+ + W+       N     Y  +    G +DS    V   ++   V
Sbjct: 10  QVFDVTAVNISATSLTLIWKVSD----NESSSNYTYKIHVAGETDSSNLNV---SEPRAV 62

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPT 822
           +  L+  T Y I V     +       P  ++ H   P    P+
Sbjct: 63  IPGLRSSTFYNITVCP---VLGDIEGTPGFLQVH-TPPVPSGPS 102

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347

 Score = 53.6 bits (128), Expect = 1e-07
 Identities = 34/181 (18%), Positives = 52/181 (28%), Gaps = 12/181 (6%)

Query: 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRNVLTLD 163
           P   +  P    V +   + L C   G  +    W         T      +    LTL 
Sbjct: 159 PTLKVQVPNA-SVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLA 217

Query: 164 RVTESEN---YTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKIS-EVTATSV-R 218
            VT   N    TC A + +G  E S  V V    +  L   V      I   V       
Sbjct: 218 NVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPS 277

Query: 219 LDWTYPSETLLYY-VIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277
           L W +    L     I  +        +   G +     +   +      + ++A N  G
Sbjct: 278 LRWLFNGSVLNETSFIFTEFLEPAANETVRHGCL----RLNQPTHVNNGNYTLLAANPFG 333

Query: 278 R 278
           +
Sbjct: 334 Q 334

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347

 Score = 44.0 bits (103), Expect = 1e-04
 Identities = 16/77 (20%), Positives = 24/77 (31%), Gaps = 12/77 (15%)

Query: 127 CVAVGSPMPFVKWRK-GQNIELTPDDKLPVGRNV---------LTLDRVTESEN--YTCI 174
               G P P ++W   G  +  T                    L L++ T   N  YT +
Sbjct: 268 FSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLL 327

Query: 175 AASVLGVIETSTIVKVQ 191
           AA+  G    S +    
Sbjct: 328 AANPFGQASASIMAAFM 344

>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1 Length = 122

 Score = 50.3 bits (120), Expect = 1e-07
 Identities = 17/103 (16%), Positives = 29/103 (28%), Gaps = 15/103 (14%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRK-GQNIELTPDDKLPV---- 155
             PP  S         +      + C    +P P  + W      +E     +  V    
Sbjct: 12  NGPPIISSTQTQ--HALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETIS 69

Query: 156 ----GRNVLTLDRVTES---ENYTCIAASVLGVIETSTIVKVQ 191
                 + LT+  +  +     Y C A +  G       +K Q
Sbjct: 70  TEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQ 112

>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R* Length = 213

 Score = 51.7 bits (123), Expect = 2e-07
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 15/120 (12%)

Query: 87  GRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWR------ 140
                ++  +   V        + P   +E+ +   L L+C A       + +       
Sbjct: 87  DESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSS 146

Query: 141 -------KGQNIELTPDDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
                    ++++     ++    + LT+D VT S+   YTC A+S L   + ST V+V 
Sbjct: 147 KHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH 206

>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A Length = 202

 Score = 51.7 bits (123), Expect = 2e-07
 Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 2/104 (1%)

Query: 106 QFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV 165
           +    P +     +   ++L+C   G   PF  WR   +  L          + LT++ V
Sbjct: 2   KIETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPV 61

Query: 166 TESEN--YTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDV 207
           +      Y C A      +E    V++             PL+ 
Sbjct: 62  SFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEA 105

>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} Length = 117

 Score = 49.4 bits (118), Expect = 2e-07
 Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 18/111 (16%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDK------ 152
               PP+    P  L+ V    P  L+C A G P P ++W K G+ +E   DD       
Sbjct: 5   QEDFPPRIVEHPSDLI-VSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRML 63

Query: 153 LPVGRNVLTLDRVTESEN-------YTCIAASVLGVIETSTIVKVQCKYAP 196
           LP G   L   R+            Y C+A + LG    S    ++   A 
Sbjct: 64  LPSG--SLFFLRIVHGRKSRPDEGVYVCVARNYLGEA-VSHDASLEVAAAA 111

>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361

 Score = 52.9 bits (127), Expect = 2e-07
 Identities = 17/86 (19%), Positives = 25/86 (29%), Gaps = 4/86 (4%)

Query: 110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKW--RKGQNIELTPDDKLPVGRNVLTLDRVTE 167
              +  E  L   L + C      M  V       Q +    +  + V    L   +V  
Sbjct: 251 YKESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSVRNGDLFFKKVQV 310

Query: 168 SEN--YTCIAASVLGVIETSTIVKVQ 191
            +   YTC A         S  +KV 
Sbjct: 311 EDGGVYTCYAMGETFNETLSVELKVY 336

>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A* Length = 265

 Score = 52.4 bits (125), Expect = 2e-07
 Identities = 20/90 (22%), Positives = 29/90 (32%), Gaps = 9/90 (10%)

Query: 103 VPPQFSIPP-PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLT 161
             P+      P       +S     C A G+P+P +K  K     L   + + V R+   
Sbjct: 182 YGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD--- 238

Query: 162 LDRVTESENYTCIAASVLGVIETSTIVKVQ 191
                    Y C A S  G +     V V 
Sbjct: 239 -----LEGTYLCRARSTQGEVTREVTVNVL 263

>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 104

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 12/109 (11%)

Query: 89  LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIEL 147
           + H     +    +    F        +V     + L+   +      VKW K GQ I++
Sbjct: 1   MHHHHH-HSSMDEKKSTAFQKKLEPAYQVSKGHKIRLTVE-LADHDAEVKWLKNGQEIQM 58

Query: 148 TPDDKLPV---GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           +    +      +  LT+ + + ++   Y C+     G  + ST + V+
Sbjct: 59  SGSKYIFESIGAKRTLTISQCSLADDAAYQCVV----GGEKCSTELFVK 103

>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens} Length = 97

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 13/88 (14%), Positives = 26/88 (29%), Gaps = 8/88 (9%)

Query: 111 PPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPV----GRNVLTLDRV 165
                       +   C          V W  G   +L   +K  +    G  +L +  +
Sbjct: 7   QIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFG-VRQLENSEKYEITYEDGVAILYVKDI 65

Query: 166 TESE--NYTCIAASVLGVIETSTIVKVQ 191
           T+ +   Y C   +  G   +   + V+
Sbjct: 66  TKLDDGTYRCKVVNDYGEDSSYAELFVK 93

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 3e-07
 Identities = 41/311 (13%), Positives = 88/311 (28%), Gaps = 107/311 (34%)

Query: 111 PPALLEVMLD--------SPLNLSC-VAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLT 161
              LL  +L         +  NLSC + + +          +  ++T D         ++
Sbjct: 244 ENCLL--VLLNVQNAKAWNAFNLSCKILLTT----------RFKQVT-DFLSAATTTHIS 290

Query: 162 LDRV----TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSV 217
           LD      T  E  + +    L       + +      P     ++ +   I +  AT  
Sbjct: 291 LDHHSMTLTPDEVKS-LLLKYLD-CRPQDLPREVLTTNPRR---LSIIAESIRDGLAT-- 343

Query: 218 RLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277
              W             +K    +    +++ II +  ++  L P    + +    + L 
Sbjct: 344 ---WDN-----------WK----HVNCDKLTTIIES--SLNVLEPAEYRKMF----DRL- 378

Query: 278 RGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPN-GQITAKHHRRIGLV 336
                  +V           P       + +  + + W +    +   +  K H+   LV
Sbjct: 379 -------SVF----------PPSA---HIPTILLSLIWFDVIKSDVMVVVNKLHKY-SLV 417

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLV 396
           E          ++  I+L  +                          E     HR I  V
Sbjct: 418 EKQPKESTI--SIPSIYLELKVKL-----------------------ENEYALHRSI--V 450

Query: 397 ETYSLTGLYPN 407
           + Y++   + +
Sbjct: 451 DHYNIPKTFDS 461

>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A Length = 100

 Score = 48.1 bits (115), Expect = 4e-07
 Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNV 159
              F+       +V     +      +  P   VKW K    E+ P  K        + +
Sbjct: 7   GAAFAKILDPAYQVDKGGRVRFVVE-LADPKLEVKWYKN-GQEIRPSTKYIFEHKGCQRI 64

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           L ++    ++   Y   A    G  + ST + V+
Sbjct: 65  LFINNCQMTDDSEYYVTA----GDEKCSTELFVR 94

>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X Length = 103

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 18/100 (18%), Positives = 26/100 (26%), Gaps = 16/100 (16%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV------- 155
             P  +     L     D    +     G+P P ++W       L     +         
Sbjct: 3   FAPTITF----LESPTSDHHWCIPFTVKGNPKPALQWFYN-GAILNESKYICTKIHVTNH 57

Query: 156 --GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
                 L LD  T     +YT IA +  G  E        
Sbjct: 58  TEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFM 97

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus} Length = 290

 Score = 50.5 bits (120), Expect = 1e-06
 Identities = 14/106 (13%), Positives = 26/106 (24%), Gaps = 14/106 (13%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGR 157
              +  P  S+P  +   +       + C            W K                
Sbjct: 183 EAIKAIPVVSVPETSH-LLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSW 241

Query: 158 N----------VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
           +           LT+      +   + C A +  G    +T +KV 
Sbjct: 242 HRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVV 287

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus} Length = 290

 Score = 48.6 bits (115), Expect = 4e-06
 Identities = 23/168 (13%), Positives = 47/168 (27%), Gaps = 18/168 (10%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNV-L 160
           R P +  +    L     DS   + C      +      +     L  D          +
Sbjct: 89  RDPAKLFLVGLPLF-GKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGI 147

Query: 161 TLDRVTESE---NYTCIAASVLGVIETSTI---VKVQCKYAPLLTLPVAPLDVKISE--- 211
           T+  V  +       C A      + +      V+   K  P++++P     +K  +   
Sbjct: 148 TIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFT 207

Query: 212 ----VTA--TSVRLDWTYPSETLLYYV-IQYKPKAANTPYSEISGIIT 252
               +    TSV   W   +    +   +++          E    +T
Sbjct: 208 VVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLT 255

>1nn8_R CD155 antigen, poliovirus receptor; icosahedral virus, picornavirus, virus/receptor complex; 15.00A {Homo sapiens} SCOP: i.6.1.1 PDB: 1dgi_R Length = 302

 Score = 50.5 bits (120), Expect = 1e-06
 Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 6/92 (6%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGRNVL 160
             PP+ SI        +  +   L+C A  +P P    W     +   P   +  G   L
Sbjct: 214 YYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWST--TMGPLPPFAVAQG-AQL 270

Query: 161 TLDRVTESEN--YTCIAASVLGVIETSTIVKV 190
            +  V +  N    C   + LG  +    V+V
Sbjct: 271 LIRPVDKPINTTLICNVTNALGARQAELTVQV 302

>1nn8_R CD155 antigen, poliovirus receptor; icosahedral virus, picornavirus, virus/receptor complex; 15.00A {Homo sapiens} SCOP: i.6.1.1 PDB: 1dgi_R Length = 302

 Score = 44.7 bits (105), Expect = 9e-05
 Identities = 17/122 (13%), Positives = 37/122 (30%), Gaps = 10/122 (8%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRK-GQNIELT-----PDDKLPV 155
             PQ +     + ++  +      CV+  G P   + W      +  T            
Sbjct: 116 AKPQNTAEVQKV-QLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVT 174

Query: 156 GRNVLTLDRVTE--SENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVT 213
             ++  L   ++   +N TC              V +   Y P +++     +  + +  
Sbjct: 175 VTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNE 234

Query: 214 AT 215
           AT
Sbjct: 235 AT 236

>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 118

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 18/96 (18%), Positives = 28/96 (29%), Gaps = 8/96 (8%)

Query: 103 VPPQFSIPPPAL--LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD---KLPVGR 157
            PP+  +P          +   LNL     G P P V W KG    L       +     
Sbjct: 20  EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKG-GAPLDTSRVHVRTSDFD 78

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            V  + +   S+   Y             +  ++V 
Sbjct: 79  TVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVV 114

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A Length = 236

 Score = 49.4 bits (117), Expect = 1e-06
 Identities = 24/235 (10%), Positives = 61/235 (25%), Gaps = 33/235 (14%)

Query: 691 WLAAQSPRGEGATTPPIPVRTKQYVPGAP---PQNVSCEPLSSTSIRISWEPPP---VER 744
           +  +++     +  P         +       P+   C      +    W        + 
Sbjct: 1   FSGSEATAAILSRAPWSLQSVNPGLKTNSSGEPKFTKCRSPERETFSCHWTDEVHHGTKN 60

Query: 745 SNGHIVYYKLQFVETGRSDS---EASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDG 801
                ++Y  +  +    +       +   +N   F          Y I + +     D 
Sbjct: 61  EGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPYCIKLTSNGGTVD- 119

Query: 802 PSSYPITIRTHEDDPSEVCPTQNDFRKNKKTN----------GSNFKGGYL--------- 842
              + +      D P  +  T  +                   ++ + G++         
Sbjct: 120 EKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYK 179

Query: 843 --NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGD--GDRSKPETIKTP 893
             N+     +       + V  L+ D  Y ++V +  R     G+ S+   +  P
Sbjct: 180 EVNETKWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A Length = 236

 Score = 45.6 bits (107), Expect = 3e-05
 Identities = 32/212 (15%), Positives = 66/212 (31%), Gaps = 27/212 (12%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENI---------ISYELYWNDTYAKAKHHRRIG 672
            +P+  +    +    +  W+   H G                  W   + +   +   G
Sbjct: 31  GEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAG 90

Query: 673 LVETY-SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLS-- 729
               Y + +       Y I L +      G T         + V   PP  ++   L+  
Sbjct: 91  ENSCYFNSSFTSIAIPYCIKLTS-----NGGTVDEKCFSVDEIVQPDPPIALNWTLLNVS 145

Query: 730 ----STSIRISWEPPPV--ERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELK 783
                  I++ WE P     +    ++ Y+LQ+ E    +++  ++     TS  +  LK
Sbjct: 146 LTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVN--ETKWKMMDPILTTSVPVYSLK 203

Query: 784 KWTEYRIWVLAGTSIGDGPS--SYPITIRTHE 813
              EY + V +           S  + +   +
Sbjct: 204 VDKEYEVRVRSKQRNSGNYGEFSEVLYVTLPQ 235

>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A Length = 108

 Score = 46.1 bits (109), Expect = 3e-06
 Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 17/105 (16%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPM---PFVKWRKGQNIELTP----------- 149
           P    +  P   EV +   +  S    G+ +   P VKW KG+ ++L+            
Sbjct: 3   PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDS 62

Query: 150 -DDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            D    V    L +     +   +Y C  ++      ++  + V 
Sbjct: 63  YDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107

>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A Length = 222

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 17/97 (17%), Positives = 29/97 (29%), Gaps = 8/97 (8%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTL 162
             P   I    L+   + S   L+C A G P   V W    +  L+        +    L
Sbjct: 114 NAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKL 173

Query: 163 DRVT--------ESENYTCIAASVLGVIETSTIVKVQ 191
             VT         +E + C    +      +  + + 
Sbjct: 174 FNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIP 210

>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X Length = 126

 Score = 46.5 bits (110), Expect = 3e-06
 Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 17/125 (13%)

Query: 111 PPALLEVMLDSPLNLSCVAV---GSPMPFVKWRK-GQNIELTPDDKLPVGRNV------- 159
            PA +++     ++  C+     G P P ++W   G  +  T                  
Sbjct: 3   MPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRH 62

Query: 160 --LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTAT 215
             L L++ T     NYT +AA+  G    S +        P    P  P+    S     
Sbjct: 63  GCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM--DNPFEFNPEDPIPDTNSTSGDP 120

Query: 216 SVRLD 220
             + D
Sbjct: 121 VEKKD 125

>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} Length = 219

 Score = 47.8 bits (113), Expect = 4e-06
 Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 16/144 (11%)

Query: 688 YYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNG 747
               +      G   +         + +  APP +V+     S   +ISW     + +  
Sbjct: 73  DIFSVQITDQSG-QYSQECGSFLLAESIKPAPPFDVT--VTFSGQYQISWRSDYEDPAFY 129

Query: 748 HIVY---YKLQFVETGRSDSEASIVTL----KNQTSFVLDELKKWTEYRIWVLAGTSIGD 800
            +     Y+LQ+   G   + +    L        S +  E +K + Y + V AG   G 
Sbjct: 130 MLKGKLQYELQYRNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAGPMPGS 189

Query: 801 GPS------SYPITIRTHEDDPSE 818
                    S P+  +T  ++  E
Sbjct: 190 SYQGTWSEWSDPVIFQTQSEELKE 213

>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} Length = 219

 Score = 44.4 bits (104), Expect = 7e-05
 Identities = 20/148 (13%), Positives = 42/148 (28%), Gaps = 17/148 (11%)

Query: 453 YYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI 512
               +      G+ +      +  +  +P   P DV V    S    I W          
Sbjct: 73  DIFSVQITDQSGQYSQECGSFLLAESIKP-APPFDVTVTF--SGQYQISWRSDYEDPAFY 129

Query: 513 TG-----YKVYYTQDQSLPMSAWETQVVDNNQLTT---ISDLTPHTIYTIRVQAFTSVGP 564
                  Y++ Y         +   +++  +  +      +    + Y ++V+A    G 
Sbjct: 130 MLKGKLQYELQYRNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAGPMPGS 189

Query: 565 GPL------SAPVLVKTQQGVPSQPRDL 586
                    S PV+ +TQ     +    
Sbjct: 190 SYQGTWSEWSDPVIFQTQSEELKEHHHH 217

>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 102

 Score = 45.1 bits (107), Expect = 4e-06
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 14/98 (14%)

Query: 104 PPQFSIPPPAL--LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GR 157
              F+   PA   ++    +   LSC  V      V W K    +L+   K+ V      
Sbjct: 8   KVVFAKEQPAHREVQAEAGASATLSCE-VAQAQTEVTWYKD-GKKLSSSSKVRVEAVGCT 65

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
             L + +  ++E   Y+C A    G  + S  ++V  +
Sbjct: 66  RRLVVQQAGQAEAGEYSCEA----GGQQLSFRLQVAGQ 99

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens} Length = 289

 Score = 48.2 bits (114), Expect = 5e-06
 Identities = 12/102 (11%), Positives = 31/102 (30%), Gaps = 11/102 (10%)

Query: 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPD-------D 151
           ++      S+       V     + L C+ +G+ +   +W    +      +       D
Sbjct: 177 LQVSSINVSVNAVQT-VVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLD 235

Query: 152 KLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
                R++L +      +   YTC     +   +    + + 
Sbjct: 236 MPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINIT 277

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens} Length = 289

 Score = 43.2 bits (101), Expect = 2e-04
 Identities = 20/160 (12%), Positives = 45/160 (28%), Gaps = 16/160 (10%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN 158
           P   V    +      + +   + + + C     P   V   + +     P        +
Sbjct: 89  PDPTVGFLPNDAEELFIFLTEITEITIPCRVTD-PQLVVTLHEKKGDVALPV----PYDH 143

Query: 159 VLTLDRVTESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE------- 211
                 + E  +Y C        +++      + + +  + + V  +   + +       
Sbjct: 144 QRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQVSS-INVSVNAVQTVVRQGENITLM 202

Query: 212 --VTATS-VRLDWTYPSETLLYYVIQYKPKAANTPYSEIS 248
             V     V  +WTYP +     V        + PY   S
Sbjct: 203 CIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRS 242

>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A Length = 103

 Score = 45.0 bits (107), Expect = 6e-06
 Identities = 25/99 (25%), Positives = 33/99 (33%), Gaps = 13/99 (13%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--- 155
                P +F      L EV+      L CV      P VKW  G N  L P DK  +   
Sbjct: 3   SGSSGPVRFQEALKDL-EVLEGGAATLRCVLSSVAAP-VKWCYG-NNVLRPGDKYSLRQE 59

Query: 156 -GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
                L +  +   +   Y+C      G   TS  + V 
Sbjct: 60  GAMLELVVRNLRPQDSGRYSCSF----GDQTTSATLTVT 94

>2ch8_A BARF1, P33, 33 kDa early protein; viral protein, immunoglobulin domain, oncogene; HET: NAG MAN; 2.3A {Epstein-barr virus} Length = 201

 Score = 46.9 bits (111), Expect = 6e-06
 Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 10/95 (10%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP---DDKLPVGRN 158
             P   S+      +    S L ++C     P P V+W   + +E  P   +  +   ++
Sbjct: 102 VKPLTLSVHSE-RSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKD 160

Query: 159 ----VLTLDRVTESE--NYTCIAASVLGVIETSTI 187
               V     + +      TC+  +         +
Sbjct: 161 GSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGVYV 195

>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 103

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 13/96 (13%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNV 159
              F       L+V        +C     P   V WRKG  +EL    K           
Sbjct: 8   ANCF-TEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKG-LLELRASGKHQPSQEGLTLR 64

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
           LT+  + +++   YTC      G  ++   + VQ +
Sbjct: 65  LTISALEKADSDTYTCDI----GQAQSRAQLLVQGR 96

>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 44.6 bits (105), Expect = 9e-06
 Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 7/102 (6%)

Query: 719 PPQNVSCEPL--SSTSIRISWEPPP-VERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
           PP+NV   P+  +   + ++W+ P          + + L++        +   ++  N T
Sbjct: 10  PPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELS--NGT 67

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPS--SYPITIRTHEDD 815
           +  + +     EY I V A  +     S  S         ++
Sbjct: 68  AHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATPWTEE 109

>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 8/79 (10%)

Query: 485 PRDVQVRPL--SSSTMVIQWDEPET---PNGQITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           P +V  RP+  +   + + W  P T   P      + + Y          W+   + N  
Sbjct: 11  PENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLIL---DQWQHVELSNGT 67

Query: 540 LTTISDLTPHTIYTIRVQA 558
             TI+D      Y I+V A
Sbjct: 68  AHTITDAYAGKEYIIQVAA 86

>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens} Length = 95

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 99  PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--- 155
           P ++    F    P  +EV   SP              V+W++G   +++  +K  +   
Sbjct: 3   PGKKPVSAF-SKKPRSVEVAAGSPAVFEAE-TERAGVKVRWQRG-GSDISASNKYGLATE 59

Query: 156 -GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             R+ LT+  V  ++  +Y  IA    G  +    +KV 
Sbjct: 60  GTRHTLTVREVGPADQGSYAVIA----GSSKVKFDLKVI 94

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A Length = 195

 Score = 45.7 bits (107), Expect = 2e-05
 Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 5/108 (4%)

Query: 703 TTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRS 762
               +          + P N+     + TS+ ISW+          + YY++ + ETG +
Sbjct: 90  IRVRVEKDGGSGGVSSVPTNLEVVAATPTSLLISWDASY-----YGVSYYRITYGETGGN 144

Query: 763 DSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIR 810
                     + ++  +  LK   +Y I V A +         PI+I 
Sbjct: 145 SPVQEFTVPYSSSTATISGLKPGVDYTITVYAYSDYYGSHHYSPISIN 192

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A Length = 195

 Score = 41.5 bits (96), Expect = 5e-04
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 1/80 (1%)

Query: 210 SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT-TYYTVRNLSPYTEYEF 268
              T TS+ + W      + YY I Y     N+P  E +   + +  T+  L P  +Y  
Sbjct: 113 VAATPTSLLISWDASYYGVSYYRITYGETGGNSPVQEFTVPYSSSTATISGLKPGVDYTI 172

Query: 269 YIIAVNNLGRGPPSSPAVIT 288
            + A ++       SP  I 
Sbjct: 173 TVYAYSDYYGSHHYSPISIN 192

>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 Length = 184

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 14/103 (13%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELTPDDKLPVGR--- 157
             PP+      +   +       L C +   P +    W K  + E          R   
Sbjct: 81  HGPPRVKAVKSSE-HINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFV 139

Query: 158 ------NVLTLDRVTESE---NYTCIAASVLGVIETSTIVKVQ 191
                 + L ++ +        Y C   S  G  +    ++V+
Sbjct: 140 SSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182

>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 126

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 18/105 (17%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPM---PFVKWRKGQNIELTP----------- 149
              F I  P    V +   +          +   P +KW KG+ ++L             
Sbjct: 7   GILF-IEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKET 65

Query: 150 -DDKLPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            +    V    + + +  ++   NY C           S  ++V 
Sbjct: 66  FERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVH 110

>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 10/100 (10%), Positives = 26/100 (26%), Gaps = 13/100 (13%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSC-VAVGSPMPFVKWRKGQNIELTPDDKLPV----GRN 158
                      +EV+     +  C ++  S      W  G    +    +        + 
Sbjct: 8   HVGI-TKRLKTMEVLEGESCSFECVLSHESASDPAMWTVG-GKTVGSSSRFQATRQGRKY 65

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           +L +     S+              + +   + V+ +  P
Sbjct: 66  ILVVREAAPSDAGEVVFSV----RGLTSKASLIVRERSGP 101

>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 98

 Score = 42.5 bits (99), Expect = 4e-05
 Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 204 PLDVKISEVTA--TSVRLDWTYPSET-LLYYVIQYKPKAANTPYSE--ISGIITTYYTVR 258
           P++V I+E  +   S  + W  P  + +  Y+++++PK +   + E  I G + +Y T++
Sbjct: 8   PVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLNSY-TIK 66

Query: 259 NLSPYTEYEFYIIAVNNLGRG 279
            L P   YE  +I++   G  
Sbjct: 67  GLKPGVVYEGQLISIQQYGHQ 87

>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A* Length = 306

 Score = 45.1 bits (105), Expect = 6e-05
 Identities = 19/143 (13%), Positives = 45/143 (31%), Gaps = 5/143 (3%)

Query: 428 PIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRD 487
               +  +Y                  I +   +               +       P++
Sbjct: 159 RGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKN 218

Query: 488 VQVRPLSSSTMV-IQWDEPETPNGQITGYKV-YYTQDQSLPMSAWETQVVDNNQLTTISD 545
           +Q++PL +S  V + W+ P+T +   + + + +  Q Q       + +V  +    T + 
Sbjct: 219 LQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTD---KTSAT 275

Query: 546 LTPHTIYTIRVQAFTSVGPGPLS 568
           +      +I V+A         S
Sbjct: 276 VICRKNASISVRAQDRYYSSSWS 298

>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 103

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 13/99 (13%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNV 159
           P     P      V     + L C    +  P V W K     +    K  V       +
Sbjct: 8   PAAIIKPLEDQ-WVAPGEDVELRCELSRAGTP-VHWLKD-RKAIRKSQKYDVVCEGTMAM 64

Query: 160 LTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           L +   +  +   YTC   +     +++  + V+ K + 
Sbjct: 65  LVIRGASLKDAGEYTCEVEAS----KSTASLHVEEKASG 99

>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 101

 Score = 41.6 bits (98), Expect = 8e-05
 Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 17/100 (17%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-------- 155
           P     P     +V +   + ++   V      V W K   +ELT +D            
Sbjct: 8   PVLIVTPLEDQ-QVFVGDRVEMAVE-VSEEGAQVMWMKN-GVELTREDSFKARYRFKKDG 64

Query: 156 GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
            R++L    V + +   Y  I        +    + V+ K
Sbjct: 65  KRHILIFSDVVQEDRGRYQVITNGG----QCEAELIVEEK 100

>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 113

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 17/97 (17%), Positives = 28/97 (28%), Gaps = 14/97 (14%)

Query: 103 VPPQFSIPPPAL--LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----G 156
               + + P     +  +    + L+C  +  P   V+W K    E+     L +     
Sbjct: 9   DVSSWIVYPSGKVYVAAVRLERVVLTCE-LCRPWAEVRWTKD-GEEVVESPALLLQKEDT 66

Query: 157 RNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
              L L  V   +   Y C           S  V V 
Sbjct: 67  VRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVT 99

>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440

 Score = 44.4 bits (105), Expect = 1e-04
 Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 7/93 (7%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD---DKLPVGRN-V 159
                + PPA L V       L C A  + +  V W       +T      ++ V  +  
Sbjct: 340 YAPVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGT 398

Query: 160 LTLDRVTESEN--YTCIAASVLGVIETSTIVKV 190
           L    VT  +   YTC+ ++ +G    S  + V
Sbjct: 399 LNFTNVTVQDTGMYTCMVSNSVGNTTASATLNV 431

>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4 Length = 103

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 13/100 (13%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDKLPV----GRN 158
                              + L C  V      VKW K G+ I   P  +  +     ++
Sbjct: 7   GIMV-TKQLEDTTAYCGERVELECE-VSEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKH 64

Query: 159 VLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           +L ++  T+++   Y+ +        ++S  + V  K  P
Sbjct: 65  ILIIEGATKADAAEYSVMTTGG----QSSAKLSVDLKSGP 100

>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452

 Score = 43.6 bits (103), Expect = 2e-04
 Identities = 22/94 (23%), Positives = 32/94 (34%), Gaps = 8/94 (8%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP---DDKLPVGRN-V 159
              F +  P  L +       L C     PM  VKW       L+      ++ V  +  
Sbjct: 351 SAPFIMDAPRDLNISEGRMAELKCRT--PPMSSVKWLLPNGTVLSHASRHPRISVLNDGT 408

Query: 160 LTLDRVTESEN--YTCIAASVLGVIETSTIVKVQ 191
           L    V  S+   YTC+  +V G    S  + V 
Sbjct: 409 LNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVS 442

>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A Length = 93

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 12/94 (12%), Positives = 30/94 (31%), Gaps = 13/94 (13%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNV 159
             +   P   + EV +    +     +  P    +W+      L       +     +++
Sbjct: 5   LIEVEKPLYGV-EVFVGETAHFEIE-LSEPDVHGQWKLK-GQPLAASPDCEIIEDGKKHI 61

Query: 160 LTLDRVTESEN--YTCIAASVLGVIETSTIVKVQ 191
           L L           +  AA+     +++  +KV+
Sbjct: 62  LILHNCQLGMTGEVSFQAANT----KSAANLKVK 91

>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R* Length = 211

 Score = 42.4 bits (99), Expect = 3e-04
 Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 18/180 (10%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENI---ISYELYWNDTYAKAKHHRRIGLVETY- 677
              + ++          L W        +    I Y+ Y    +   K  +RI       
Sbjct: 6   DLLQHVK-FQSSNFENILTWDSGPEGTPDTVYSIEYKTYGERDWVAKKGCQRI--TRKSC 62

Query: 678 --SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRI 735
             ++       LYY  + A S  G  AT       + Q+    PP +V+C      SI++
Sbjct: 63  NLTVETGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHTTLKPP-DVTCIS-KVRSIQM 120

Query: 736 SWEPPPVERSNG-------HIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEY 788
              P P     G         +++ L +    + +    +     Q  +    L   TE+
Sbjct: 121 IVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTYQMHLGGKQREYEFFGLTPDTEF 180

>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae} Length = 250

 Score = 42.6 bits (99), Expect = 3e-04
 Identities = 15/116 (12%), Positives = 31/116 (26%), Gaps = 29/116 (25%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKG--------QNIELTPDDKLPV 155
                +    +++V   + + ++C         V W  G                +K   
Sbjct: 135 SNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQF 194

Query: 156 GR----------------NVLTLDRVTESE--NYTCIAASVLGVIETS---TIVKV 190
           G                   L +     ++     C  A+  G ++     TI+KV
Sbjct: 195 GITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTILKV 250

>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A* Length = 208

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 6/106 (5%)

Query: 94  RQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK-GQNIELTPDDK 152
             V   V +   Q  +       V     + L+C++       ++W    Q+++LT    
Sbjct: 100 ATVRFHVHQPVTQPFLQVTNT-TVKELDSVTLTCLS-NDIGANIQWLFNSQSLQLTERMT 157

Query: 153 LPVGRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           L    ++L +D +   +   Y C  ++ + V   S  +K+   + P
Sbjct: 158 LSQNNSILRIDPIKREDAGEYQCEISNPVSV-RRSNSIKLDIIFDP 202

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	904
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	100.0
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	100.0
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	100.0
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	100.0
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	100.0
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	100.0
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	100.0
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	100.0
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	100.0
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	100.0
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	100.0
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	99.97
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	99.97
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	99.97
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	99.96
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	99.96
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	99.96
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	99.96
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	99.96
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	99.95
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	99.95
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	99.94
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	99.94
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	99.93
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	99.92
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	99.91
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	99.91
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	99.9
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	99.9
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	99.9
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	99.89
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	99.89
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	99.89
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	99.89
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	99.89
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	99.89
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	99.88
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	99.88
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	99.88
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	99.88
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	99.88
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	99.87
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	99.87
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	99.86
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	99.86
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	99.86
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	99.85
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	99.85
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	99.84
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	99.84
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	99.83
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	99.83
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	99.83
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	99.83
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	99.83
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	99.82
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	99.82
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	99.81
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	99.81
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	99.81
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	99.8
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	99.8
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	99.8
3b43_A	570	Titin; I-SET IG fold, extended poly-IG filament, e	99.79
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	99.78
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	99.77
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	99.77
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	99.76
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	99.76
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	99.75
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	99.74
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	99.73
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	99.72
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	99.69
4go6_B	232	HCF C-terminal chain 1; tandem fibronectin repeat,	99.68
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	99.65
4go6_B	232	HCF C-terminal chain 1; tandem fibronectin repeat,	99.65
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	99.65
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	99.62
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	99.62
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	99.62
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	99.61
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	99.61
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	99.61
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	99.6
3d85_D	306	IL-12B, interleukin-12 subunit P40, cytotoxic lymp	99.6
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	99.6
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	99.6
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	99.6
2rik_A	284	Titin; I-SET IG fold, poly-IG linear array, struct	99.59
2ocw_A	585	Polymeric-immunoglobulin receptor; SC, secretory,	99.58
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	99.58
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	99.57
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	99.57
3knb_B	107	Obscurin-like protein 1; IG-like, titin, OBSL1, AT	99.57
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	99.56
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	99.56
2ocw_A	585	Polymeric-immunoglobulin receptor; SC, secretory,	99.55
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	99.55
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	99.55
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	99.54
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	99.54
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	99.54
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	99.53
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	99.52
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	99.52
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	99.51
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	99.5
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	99.5
3qs9_E	527	FL cytokine receptor; immunoglobulin-like domain,	99.5
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	99.5
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	99.5
2cqv_A	114	MLCK, myosin light chain kinase, smooth muscle and	99.5
3knb_A	100	Titin; IG-like, titin, OBSL1, ATP-binding, calmodu	99.49
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	99.49
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	99.49
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	99.48
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	99.47
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	99.47
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	99.47
2crm_A	120	Fibronectin type-III domain containing protein 3A;	99.47
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	99.47
3kld_A	384	Contactin 4, axcam, BIG-2; cell adhesion, protein	99.47
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	99.47
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	99.47
3laf_A	403	Deleted in colorectal cancer; netrin-1 receptor, i	99.47
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	99.46
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	99.46
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	99.46
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	99.46
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	99.46
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	99.46
2crm_A	120	Fibronectin type-III domain containing protein 3A;	99.46
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	99.46
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	99.45
1wio_A	363	CD4, T-cell surface glycoprotein CD4; immunoglobul	99.45
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	99.45
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	99.45
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	99.45
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	99.45
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	99.44
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	99.44
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	99.44
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	99.44
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	99.44
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	99.44
2ec8_A	524	MAST/stem cell growth factor receptor; glycoprotei	99.44
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	99.43
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	99.43
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	99.43
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	99.43
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	99.43
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	99.43
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	99.43
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	99.42
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	99.42
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	99.42
2v5m_A	388	Dscam; neurobiology SPL immunoglobulin domain, cel	99.42
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	99.41
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	99.41
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	99.41
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	99.41
1wit_A	93	Twitchin 18TH IGSF module; immunoglobulin superfam	99.41
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	99.41
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	99.41
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	99.41
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	99.4
2wim_A	291	N-CAM 2, NCAM2, neural cell adhesion molecule 2; c	99.4
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	99.4
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	99.4
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	99.4
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	99.4
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	99.4
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	99.4
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	99.4
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	99.39
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	99.39
3p3y_A	404	Neurofascin; IG domains, cell adhesion; HET: NAG;	99.39
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	99.39
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	99.39
2crz_A	110	Fibronectin type-III domain containing protein 3A;	99.39
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	99.39
1bih_A	395	Hemolin; insect immunity, LPS-binding, homophilic	99.39
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	99.38
1wio_A	363	CD4, T-cell surface glycoprotein CD4; immunoglobul	99.38
2yd9_A	304	Receptor-type tyrosine-protein phosphatase S; hydr	99.38
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	99.38
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	99.38
2crz_A	110	Fibronectin type-III domain containing protein 3A;	99.38
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	99.37
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	99.37
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	99.37
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	99.37
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	99.37
2kkq_A	116	Myotilin; unknown function, actin-binding, cell me	99.37
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	99.36
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	99.36
3qp3_A	103	Titin; I-SET IG-like, sarcomere, M-BAND, transfera	99.36
2dm2_A	110	Palladin; beta-sandwich, KIAA0992, actin-associate	99.36
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	99.36
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	99.36
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	99.36
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	99.35
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	99.35
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	99.35
2ckn_A	95	Basic fibroblast growth factor receptor 1; kinase,	99.35
1g1c_A	99	Immunoglobulin-like domain I1 from titin; immunogl	99.35
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	99.35
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	99.35
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	99.35
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	99.34
2y25_A	317	Myomesin; structural protein, sarcomere, M-BAND, i	99.34
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	99.34
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	99.34
4dep_C	349	Interleukin-1 receptor accessory protein; B-trefoi	99.34
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	99.34
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	99.34
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	99.33
1qz1_A	291	Neural cell adhesion molecule 1, 140 kDa isoform;	99.33
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	99.33
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	99.33
2rcj_C	523	Light chain; immunoglobulin M, polymeric antibodie	99.33
3p2t_A	196	Leukocyte immunoglobulin-like receptor subfamily 4	99.33
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	99.33
2yr3_A	99	Myosin light chain kinase, smooth muscle; IG domai	99.33
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	99.33
1cs6_A	382	Axonin-1; neural cell adhesion, cell adhesion; 1.8	99.33
2gi7_A	184	GPVI protein; IG-like domains, blood clotting, cel	99.32
2eo9_A	118	Roundabout homolog 1; beta-sandwich, IG-fold, H-RO	99.32
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	99.32
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	99.32
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	99.32
2edj_A	100	Roundabout homolog 2; KIAA1568 protein, beta sandw	99.32
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	99.32
2dm3_A	110	KIAA0992 protein, palladin; beta-sandwich, myopall	99.32
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	99.32
3bp6_B	202	Programmed cell death 1 ligand 2; PD-1, PD-L2, com	99.32
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	99.32
3puc_A	99	Titin; I-SET IG-like domain, M-BAND, transferase;	99.32
3kvq_A	108	Vascular endothelial growth factor receptor 2; veg	99.31
3irg_B	107	Obscurin-like protein 1; IG-like, titin, OBSL1, co	99.31
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	99.31
1vca_A	202	VCAM-D1,2, human vascular cell adhesion molecule-1	99.31
4fa8_A	203	Secreted protein BARF1; immunoglobulin-like domain	99.31
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	99.31
2e7c_A	118	Myosin-binding protein C, fast-type; IG-like domai	99.3
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	99.3
2kdg_A	100	Myotilin; immonoglobulin domain, actin-binding, st	99.3
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	99.3
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	99.3
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	99.3
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	99.3
3rbs_A	207	Myomesin-1; immunoglobulin C-SET domain, contractI	99.3
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	99.29
2yd1_A	212	Tyrosine-protein phosphatase LAR; hydrolase; 1.80A	99.29
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	99.29
1ugn_A	198	LIR1, leukocyte immunoglobulin-like receptor 1; im	99.29
2d3v_A	196	Leukocyte immunoglobulin-like receptor subfamily A	99.29
2dav_A	126	SLOW MYBP-C, myosin-binding protein C, SLOW-type;	99.29
3rjd_A	262	High affinity immunoglobulin gamma FC receptor I;	99.29
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	99.29
3rbs_A	207	Myomesin-1; immunoglobulin C-SET domain, contractI	99.29
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	99.28
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	99.28
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	99.28
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	99.28
1u2h_A	99	APEG-1, aortic preferentially expressed protein 1;	99.28
1he7_A	126	High affinity nerve growth factor receptor; transf	99.28
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	99.28
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	99.28
2o26_X	290	MAST/stem cell growth factor receptor; stem cell f	99.27
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	99.27
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	99.27
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	99.27
2yuz_A	100	Myosin-binding protein C, SLOW-type; immunoglobuli	99.27
1uct_A	218	Immunoglobulin alpha FC receptor; beta stands, imm	99.27
1fhg_A	154	Telokin; immunoglobulin fold, beta barrel, contrac	99.27
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	99.27
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	99.26
2wv3_A	190	Neuroplastin; igcam, membrane, glycoprotein, cell	99.26
3cx2_A	108	Myosin-binding protein C, cardiac-type; protonatio	99.26
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	99.26
1ry7_B	334	FGFR-3, fibroblast growth factor receptor 3; FGF-F	99.26
1nct_A	106	Titin; cell adhesion, glycoprotein, transmembrane,	99.26
1itb_B	315	Type 1 interleukin-1 receptor; immunoglobulin fold	99.26
1wwb_X	103	Protein (brain derived neurotrophic factor recepto	99.26
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	99.25
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	99.25
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	99.25
3qs7_E	423	FL cytokine receptor; immunoglobulin-like domain,	99.25
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	99.25
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	99.25
1oll_A	188	NK receptor; immune system/receptor, NK cell trigg	99.25
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	99.25
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	99.25
3vh8_G	316	Killer cell immunoglobulin-like receptor 3DL1; imm	99.25
2a38_A	194	Titin; Z1Z2, structural protein; 2.00A {Homo sapie	99.25
2j8h_A	197	Titin, connectin; cardiomyopathy, nuclear protein,	99.25
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	99.24
3grw_A	241	Fibroblast growth factor receptor 3; FGFR3, protei	99.24
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	99.24
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	99.24
3v2a_R	772	Vascular endothelial growth factor receptor 2; IG-	99.24
3irg_A	100	Titin; IG-like, titin, OBSL1, complex, alternative	99.24
2v5t_A	189	NCAM2, N-CAM 2, neural cell adhesion molecule 2; p	99.23
3rjd_A	262	High affinity immunoglobulin gamma FC receptor I;	99.23
3jz7_A	214	MCAR, CAR, coxsackievirus and adenovirus receptor	99.23
1waa_A	93	Titin; metal binding protein, calmodulin-binding,	99.23
4fqp_A	313	Poliovirus receptor; immunoglobulin-like domain, I	99.23
2c5d_C	195	AXL oncogene, tyrosine-protein kinase receptor UFO	99.23
4fa8_A	203	Secreted protein BARF1; immunoglobulin-like domain	99.23
3oq3_B	329	IFN-alpha/beta binding protein C12R; mousepox viru	99.23
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	99.23
3sgj_C	204	Human FCG3A receptor; receptor complex, FC recepto	99.23
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	99.22
2bk8_A	97	Connectin, M1, titin heart isoform N2-B; IG domain	99.22
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	99.22
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	99.21
4fqp_A	313	Poliovirus receptor; immunoglobulin-like domain, I	99.21
2rcj_C	523	Light chain; immunoglobulin M, polymeric antibodie	99.21
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	99.21
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	99.21
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	99.2
3vh8_G	316	Killer cell immunoglobulin-like receptor 3DL1; imm	99.19
1rhf_A	182	Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3	99.19
2edn_A	118	Myosin-binding protein C, fast-type; beta-sandwich	99.19
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	99.18
2r15_A	212	Myomesin-1; sarcomeric protein, IG-like domains, h	99.18
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	99.18
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	99.18
3o4o_C	339	Interleukin-1 receptor type 2; cytokine-receptor c	99.18
4fom_A	308	Poliovirus receptor-related protein 3; immunoglobu	99.18
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	99.18
2cr3_A	99	Basic fibroblast growth factor receptor 1; IG fold	99.18
3mj6_A	268	Junctional adhesion molecule-like; immunoglobulin	99.18
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	99.17
2wng_A	327	Tyrosine-protein phosphatase non-receptor type sub	99.17
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	99.17
3ojm_B	231	Fibroblast growth factor receptor 2; beta trefoil	99.17
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	99.17
4dep_C	349	Interleukin-1 receptor accessory protein; B-trefoi	99.17
2lvc_A	91	Obscurin-like protein 1; structural genomics, nort	99.17
2iep_A	192	Muscle-specific kinase receptor; beta-sandwich, si	99.17
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	99.17
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	99.17
3caf_A	100	Fibroblast growth factor receptor 2; FGFR2, D2, AT	99.16
2x1w_L	213	Vascular endothelial growth factor receptor 2; hor	99.16
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	99.16
1x44_A	103	Myosin-binding protein C, SLOW-type; IG-like domai	99.16
1fnl_A	175	Low affinity immunoglobulin gamma FC region recept	99.16
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	99.16
4fom_A	308	Poliovirus receptor-related protein 3; immunoglobu	99.15
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	99.15
1z7z_I	450	Intercellular adhesion molecule-1; ICAM-1,kilifi,C	99.15
2yd6_A	212	PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sa	99.15
2eny_A	104	Obscurin; beta-sandwich, IG-fold, structural genom	99.15
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	99.15
2va4_A	192	NCAM2, N-CAM 2, neural cell adhesion molecule 2; t	99.14
1gxe_A	139	Myosin binding protein C, cardiac-type; cytoskelet	99.14
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	99.14
3r4d_A	208	CEA-related cell adhesion molecule 1, isoform 1/2;	99.14
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	99.14
2v44_A	189	NCAM2, neural cell adhesion molecule 2; phosphoryl	99.13
2fbo_J	250	V1V2;, variable region-containing chitin-binding p	99.13
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	99.13
2edf_A	103	Obscurin; beta-sandwich, IG-fold, structural genom	99.13
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	99.13
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	99.13
3b5h_A	184	Cervical EMMPRIN, HAB18G/CD147; IG-like domain, ce	99.13
1hng_A	176	CD2; T lymphocyte adhesion glycoprotein; 2.80A {Ra	99.13
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	99.12
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	99.12
3k0w_A	218	Mucosa-associated lymphoid tissue lymphoma translo	99.11
1wwc_A	118	Protein (NT-3 growth factor receptor TRKC); TRK re	99.11
2dku_A	103	KIAA1556 protein; beta-sandwich, IG-fold, obscurin	99.11
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	99.11
1f2q_A	176	High affinity immunoglobulin epsilon receptor ALP	99.11
3ejj_X	289	Macrophage colony-stimulating factor 1 receptor; g	99.11
3m45_A	108	Cell adhesion molecule 2; IG fold, dimer, disulfid	99.1
3bfo_A	91	Mucosa-associated lymphoid tissue lymphoma translo	99.1
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	99.1
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	99.09
1p6f_A	242	NKP46, natural cytotoxicity triggering receptor 1;	99.09
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	99.09
2r15_A	212	Myomesin-1; sarcomeric protein, IG-like domains, h	99.09
1gl4_B	98	Basement membrane-specific heparan sulfate proteog	99.09
1epf_A	191	NCAM, protein (neural cell adhesion molecule); imm	99.09
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	99.09
3s97_C	201	Contactin-1; carbonic anhdyrase like immunoglobuli	99.09
2erj_C	247	Cytokine receptor common gamma chain; immune syste	99.08
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	99.08
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	99.08
2yuv_A	100	Myosin-binding protein C, SLOW-type; SLOW-type myo	99.08
2dlt_A	106	Myosin binding protein C, fast-type; IG-like domai	99.08
2edh_A	113	Obscurin; structural genomics, NPPSFA, national pr	99.08
4hwu_A	95	Fibroblast growth factor receptor 2; FGFR2, KGFR,	99.08
2v9r_A	212	Roundabout homolog 1; proto-oncogene, differentiat	99.08
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	99.07
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	99.07
3mjg_X	289	Beta-type platelet-derived growth factor receptor;	99.07
2lu7_A	84	Obscurin-like protein 1; structural genomics, nort	99.07
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	99.07
2cry_A	122	KIN of IRRE-like protein 3; IG fold, KIN of irregu	99.07
2edk_A	101	Myosin-binding protein C, fast-type; IG fold, fast	99.07
2k1m_A	95	Myosin-binding protein C, cardiac-type; IG-I domai	99.07
1nkr_A	201	P58-CL42 KIR; inhibitory receptor, natural killer	99.06
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	99.06
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	99.06
2e6q_A	112	Obscurin-like protein 1; IG-like domain, structura	99.06
2ifg_A	347	High affinity nerve growth factor receptor; TRK, T	99.06
3lcy_A	197	Titin; A-BAND, IG tandem domains, ATP-binding, cal	99.06
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	99.06
2e6p_A	104	Obscurin-like protein 1; IG-like domain, structura	99.06
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	99.05
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	99.05
2x1w_L	213	Vascular endothelial growth factor receptor 2; hor	99.05
3jz7_A	214	MCAR, CAR, coxsackievirus and adenovirus receptor	99.05
3tf7_C	256	42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE;	99.05
2cr6_A	115	KIAA1556 protein, obscurin; IG-fold, immunoglobuli	99.04
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	99.04
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	99.04
3qr2_A	137	Basigin; CD147, EMMPRIN, immunoglobulin-like domai	99.04
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	99.03
1qgc_4	438	Protein (immunoglobulin); virus-antibody complex,	99.03
3ry4_A	170	Low affinity immunoglobulin gamma FC region recep;	99.03
4f80_A	226	Butyrophilin subfamily 3 member A1; B7 superfamily	99.03
2erj_C	247	Cytokine receptor common gamma chain; immune syste	99.02
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	99.02
1jbj_A	186	CD3 epsilon and gamma ectodomain fragment complex;	99.02
4dkd_C	292	Macrophage colony-stimulating factor 1 receptor; d	99.02
3esu_F	250	Antibody 14B7* light chain and antibody 14B7* heav	99.02
3mj8_L	213	Stimulatory hamster antibody HL4E10 FAB light CHA;	99.02
3u83_A	331	Poliovirus receptor-related protein 1; nectin-1, h	99.01
2wng_A	327	Tyrosine-protein phosphatase non-receptor type sub	99.01
3so5_A	112	LIG-3, leucine-rich repeats and immunoglobulin-lik	99.01
2v9t_A	117	Roundabout homolog 1; structural protein-receptor	99.01
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	99.01
3r4d_A	208	CEA-related cell adhesion molecule 1, isoform 1/2;	99.01
2fbo_J	250	V1V2;, variable region-containing chitin-binding p	99.0
3b5h_A	184	Cervical EMMPRIN, HAB18G/CD147; IG-like domain, ce	99.0
2ny1_B	184	T-cell surface glycoprotein CD4; HIV, GP120, CD4,	99.0
1pd6_A	104	Cardiac MYBP-C;, myosin-binding protein C, cardiac	99.0
1f97_A	212	Junction adhesion molecule; immunoglobulin superfa	98.99
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	98.99
2e7b_A	103	Obscurin; IG-like domain, structural genomics, NPP	98.99
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	98.99
2y23_A	312	Myomesin; structural protein, sarcomere, M-BAND, i	98.98
2ny1_B	184	T-cell surface glycoprotein CD4; HIV, GP120, CD4,	98.98
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	98.98
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	98.98
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	98.97
2oz4_A	265	Intercellular adhesion molecule 1; IGSF domain, st	98.97
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	98.97
2p1y_A	238	Bispecific alpha/beta TCR; autoimmunity, immunoglo	98.97
1qgc_4	438	Protein (immunoglobulin); virus-antibody complex,	98.97
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	98.97
1hnf_A	182	CD2; T lymphocyte adhesion glycoprotein; HET: NAG;	98.97
2vr9_A	217	Roundabout 1, ROBO; immunoglobulin-like domain, AX	98.96
1igt_B	444	IGG2A intact antibody - MAB231; intact immunoglobu	98.96
3sgj_C	204	Human FCG3A receptor; receptor complex, FC recepto	98.96
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	98.96
4fmk_A	225	Poliovirus receptor-related protein 2; immunoglobu	98.96
3rbg_A	124	Cytotoxic and regulatory T-cell molecule; IGV, crt	98.96
2ens_A	96	Advanced glycosylation END product-specific recept	98.96
2znx_A	242	SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, s	98.95
3uzq_A	253	Anti-dengue MAB 4E11; dengue antibody neutralizati	98.95
2dm7_A	108	KIAA1556 protein; beta-sandwich, IG-fold, obscurin	98.95
1gsm_A	210	Madcam-1, mucosal addressin cell adhesion molecule	98.95
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	98.95
3sbw_C	222	Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-	98.95
2oz4_A	265	Intercellular adhesion molecule 1; IGSF domain, st	98.94
3s35_X	122	Vascular endothelial growth factor receptor 2; ant	98.94
1nbq_A	209	JAM, junctional adhesion molecule 1, PAM-1; reovir	98.93
3auv_A	276	SC-DSFV derived from the G6-FAB; SC-DSFV (disulfid	98.93
1ccz_A	171	Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.8	98.93
1hng_A	176	CD2; T lymphocyte adhesion glycoprotein; 2.80A {Ra	98.93
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	98.92
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	98.92
4frw_A	218	Poliovirus receptor-related protein 4; immunoglobu	98.92
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	98.92
1svz_A	247	Immunoglobulin;, single-chain FV fragment 1696; an	98.92
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	98.92
1b6u_A	257	KIR2DL3, P58 killer cell inhibitory receptor; natu	98.91
1uc6_A	109	CNTF receptor, ciliary neurotrophic factor recepto	98.91
2ghw_B	247	Anti-SARS SCFV antibody, 80R; S protein, neutraliz	98.91
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	98.9
1lk3_L	210	9D7 light chain; antigen-antibody complex, immune	98.9
4i0k_A	222	CD276 antigen; immunoglobulin domain, glycoprotein	98.9
3d9a_L	213	Light chain of hyhel10 antibody fragment (FAB); ly	98.9
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	98.89
3ux9_B	256	SCFV antibody; five helices, long loop connecting	98.89
2gi7_A	184	GPVI protein; IG-like domains, blood clotting, cel	98.88
3up1_A	223	Interleukin-7 receptor subunit alpha; cytokine rec	98.87
1hzh_H	457	IGG, immunoglobulin heavy chain; antibody, immune	98.87
3nl4_L	213	Antigen binding fragment, immunoglobulin IGG - LI;	98.87
1dr9_A	201	B7-1 (CD80), T lymphocyte activation antigen; IG s	98.87
2gjj_A	264	A21 single-chain antibody fragment against ERBB2;	98.86
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	98.86
1z9m_A	145	GAPA225; nectin-like, IG-like domain, V domain, ce	98.86
3juy_B	256	3B3 single chain variant HIV-1 antibody; envelope	98.86

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}

Probab=100.00  E-value=3.2e-49  Score=456.42  Aligned_cols=548  Identities=19%  Similarity=0.238  Sum_probs=395.8

Q ss_pred             CCCCceEEecCCCeEEEEEEc-------cCCCCeEEEeeCCccccCCCCcee--ecceEEEEeee-cCCeEEEEEEEec-
Q psy8771         110 PPPALLEVMLDSPLNLSCVAV-------GSPMPFVKWRKGQNIELTPDDKLP--VGRNVLTLDRV-TESENYTCIAASV-  178 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~-------g~p~p~i~W~k~~~~~~~~~~~~~--~~~~~l~i~~l-~d~g~Y~c~a~n~-  178 (904)
                      -|.+ .++..|++++|.|.+.       |.|.+.|.|+++ +..+.......  .....|.|.++ ...+.|.|.+... 
T Consensus         9 ~p~~-~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~-~~~i~~~~~~~~~~~~~~l~i~~~~~~~~~y~C~~~~~~   86 (589)
T 3l5h_A            9 SPES-PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTN-HFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFG   86 (589)
T ss_dssp             SCSC-CCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCS-SSBSCGGGCBCCSSSCCBCCCCCCCSSCCCCCCC-CCTT
T ss_pred             ecCC-CEEeCCCCEEEEEEEeCccCccccccccceEEEeC-CEECChHHccccCCcEeEEEEecCCCcceeeEEecccCC
Confidence            3456 7789999999999998       677889999999 66564432111  23557899999 3456688988642 


Q ss_pred             -CcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCeEEeecceeceE
Q psy8771         179 -LGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPYSEISGIITTYY  255 (904)
Q Consensus       179 -~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~  255 (904)
                       .+.....+.|.+.       .+|.+|.+|++...+..+++|+|+++  ......|.|.++..+...............+
T Consensus        87 ~~~~~~~~~~l~v~-------~pP~~P~nl~c~~~~~~~~~~~W~~~~~~~~~~~y~l~~~~~~~~~~~c~~~~~~~~~c  159 (589)
T 3l5h_A           87 QLEQNVYGITIISG-------LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSC  159 (589)
T ss_dssp             CC-CCCCCCCCCC--------CCCCCCEEEEEEEETTSCEEEEEECCSCCSSCEEEEECCBCSSSBCCCEECBTTBSSCC
T ss_pred             CcccEEEeEEEecc-------CCCCCCEeeEEEECCCceEEEEECCCCcCCcCceEEEEEEEcCCCcccCCCCCCCcEEE
Confidence             1223345556666       78999999999999999999999997  4457899999875432222222222334667


Q ss_pred             EEc-CCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEe--cccCCCeeEEEecCCCCCCceeeEEEEEe
Q psy8771         256 TVR-NLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQV--RPLSSSTMVIQWDEPETPNGQITAKHHRR  332 (904)
Q Consensus       256 ~i~-~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~--~~~~~~~v~l~W~~p~~~~~~~~~~~~~~  332 (904)
                      .+. +|.+++.|.|+|.|.|..|.+. +....+......++.+|.++.+  .....+++.|+|++|...++.+.      
T Consensus       160 ~~~~~l~~~~~Y~~~v~a~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~------  232 (589)
T 3l5h_A          160 TVDYSTVYFVNIEVWVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIIL------  232 (589)
T ss_dssp             BCCSCCCSSSCEEECEEEEESSCCBC-CCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCE------
T ss_pred             EECCCCchheeEEEEEEEEeCCCCcc-cccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeE------
Confidence            777 8999999999999999999864 4455565555556789999998  56788999999998876544332      


Q ss_pred             eceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEE
Q psy8771         333 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYI  412 (904)
Q Consensus       333 ~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~  412 (904)
                                      .|.++.+......   +..                      .                      
T Consensus       233 ----------------~Y~v~~~~~~~~~---w~~----------------------~----------------------  249 (589)
T 3l5h_A          233 ----------------KYNIQYRTKDAST---WSQ----------------------I----------------------  249 (589)
T ss_dssp             ----------------EEEEEEEETTCSC---CBC----------------------C----------------------
T ss_pred             ----------------EEEEEECCCCCCC---cEE----------------------E----------------------
Confidence                            3555444321100   000                      0                      


Q ss_pred             EEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCC---CCCceeeecCCCCCCCCCCeE
Q psy8771         413 WLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGAT---TPPIPVRTKQYEPGTAPRDVQ  489 (904)
Q Consensus       413 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~---s~~~~~~t~~~~p~~~p~~l~  489 (904)
                                     .   .....+....+.+.+|.|++.|.|+|+|.+..|.+.+   |....+.|....|..+|..+.
T Consensus       250 ---------------~---~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~  311 (589)
T 3l5h_A          250 ---------------P---PEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWY  311 (589)
T ss_dssp             ---------------C---TTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEE
T ss_pred             ---------------c---cccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEE
Confidence                           0   0000123456789999999999999999999987655   566777888777767787665


Q ss_pred             EE----ecCCceEEEEecC--CCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCC
Q psy8771         490 VR----PLSSSTMVIQWDE--PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVG  563 (904)
Q Consensus       490 v~----~~~~~~~~l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g  563 (904)
                      ..    ..+.+++.|+|++  +.+.+|.+.+|.|+|+.....    +.. .......+.  .|.+++.|.|+|+|.|..|
T Consensus       312 ~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~----~~~-~~~~~~~~~--~l~~~~~Y~~~V~A~n~~G  384 (589)
T 3l5h_A          312 KIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSH----LQN-YTVNATKLT--VNLTNDRYLATLTVRNLVG  384 (589)
T ss_dssp             ECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSC----CCB-CCCSSSCCE--ECCCSSCCCEEEEEEBTTB
T ss_pred             EeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCCC----cee-eccCCceEE--EEeCCCCEEEEEEEEeCCc
Confidence            43    4567899999997  455678999999999776532    211 112233333  3889999999999999999


Q ss_pred             CCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccC
Q psy8771         564 PGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK  643 (904)
Q Consensus       564 ~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~  643 (904)
                      .|+.+...........|.++.++.+... .+++.|+|.++..                                      
T Consensus       385 ~~~~s~~~~~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~~--------------------------------------  425 (589)
T 3l5h_A          385 KSDAAVLTIPACDFQATHPVMDLKAFPK-DNMLWVEWTTPRE--------------------------------------  425 (589)
T ss_dssp             CCCCCCCCCCCTTCCCCSCCCSCEEEEC-SSSEEEECCCCSS--------------------------------------
T ss_pred             cCCCeEEEeecccccCCCCcceEEEEEC-CCeEEEEEECCCC--------------------------------------
Confidence            9987754322221123455678887765 6789999988742                                      


Q ss_pred             CCCCCCceeeEEEEEEeCCcccc-----ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC
Q psy8771         644 PTHSGENIISYELYWNDTYAKAK-----HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA  718 (904)
Q Consensus       644 ~~~~~~~~~~y~v~~~~~~~~~~-----~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~  718 (904)
                            .+.+|.|+|+..+....     ..........+.+.+|.|++.|.|+|+|++..|.|..+ .+.+.|.+.+|..
T Consensus       426 ------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~-~~~~~t~~~~P~~  498 (589)
T 3l5h_A          426 ------SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SIKAYLKQAPPSK  498 (589)
T ss_dssp             ------CCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSCCCSSSEEEEEECBEETTEECCCE-EEEEESSCCCCSS
T ss_pred             ------CccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhccccCcEEEEEEEEEeCCcccCCE-EEEEEeccCCCCC
Confidence                  57888888887765322     11222233467779999999999999999999988765 5677888888886


Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      +| ++.+...+.+++.|+|++++.+..+|.+.+|.|+|+..++..+   ...+. ..+.++|.+|.|++.|.|+|+|.|.
T Consensus       499 pp-~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~---~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~  574 (589)
T 3l5h_A          499 GP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNET---AVNVDSSHTEYTLSSLTSDTLYMVRMAAYTD  574 (589)
T ss_dssp             CC-CCCEECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCSSCCCC---CEEECTTCCBCCBCSCCSSCCEECCEEEEET
T ss_pred             CC-eEEEeecccceEEEEecCCCHHHcCccceeEEEEEEeCCCCeE---EEEeCCcccEEEecCCCCCCEEEEEEEEEeC
Confidence            55 6899999999999999997546778999999999988765433   23344 8889999999999999999999999


Q ss_pred             CCCCCCCCcEEeecC
Q psy8771         798 IGDGPSSYPITIRTH  812 (904)
Q Consensus       798 ~g~g~~s~~~~~~t~  812 (904)
                      .| |..|..+.++|.
T Consensus       575 ~G-~~~S~~~~~~T~  588 (589)
T 3l5h_A          575 EG-GKDGPEFTFTTP  588 (589)
T ss_dssp             TE-EEECCCCEECCC
T ss_pred             CC-CCCCCCeEEecC
Confidence            99 889999999885

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=100.00  E-value=3.9e-45  Score=431.42  Aligned_cols=558  Identities=17%  Similarity=0.252  Sum_probs=335.0

Q ss_pred             cceEEEEecC-CCCCcceeeEe----eC---CCCCCCCcEEEeccCCceEEEEeCCCCCCCc-----eecccccccccce
Q psy8771          10 PEEVFIILCP-LPPLIPGYILV----TE---PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-----ITHPPTRAARSHA   76 (904)
Q Consensus        10 ~~~~~~~~~~-~~p~~~~~~~~----~~---p~~~p~~l~~~~~~~~s~~v~W~~~~~~~g~-----i~~~~~~~~~~~~   76 (904)
                      +.+.++++.+ +.+.-..|+.+    -.   .......|.|+.-+.+..+|.|.+.......     +....+...++..
T Consensus        58 ~~~~a~l~sp~~~~~~~~c~~F~y~m~G~~~~~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l  137 (731)
T 2v5y_A           58 EGQRAHLLLPQLKENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQV  137 (731)
T ss_dssp             TTCEEEEEEEEECCSSCCEEEEEEEEECSSSSCSEEEEEEEEETTCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEE
T ss_pred             CCCEEEEEeCccCCCCCcEEEEEEEecCCCCCCcceEEEEEecCCCCccceeEEEeCCcCCceeEEEEEEeecCCCceEE
Confidence            4567777776 33333445442    11   1112334444555677889999987655332     1111111223333


Q ss_pred             EEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEE-Ee--eCCccccCCCCce
Q psy8771          77 RLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVK-WR--KGQNIELTPDDKL  153 (904)
Q Consensus        77 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~-W~--k~~~~~~~~~~~~  153 (904)
                      ...++.....|......+.+.......+|.|. .+.+ +.+.+|++++|.|.+.|.|.|.|. |+  ++ +..+....+.
T Consensus       138 ~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~-~~~~-~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~-g~~l~~~~~~  214 (731)
T 2v5y_A          138 IFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL-RIQN-VEVNAGQFATFQCSAIGRTVAGDRLWLQGID-VRDAPLKEIK  214 (731)
T ss_dssp             EEEEEECSSCCEEEECCBEEESSCCSSSCEEC-CCCC-EEEETTSCEEEEEEEESCCCTTCEEEEEESS-SCCEEEEEEE
T ss_pred             EEEEEecCCceEEEEeeEEeeecccccccccc-cccc-eEEeCCCcEEEEEEeCCCCCCceeEEEecCC-CccccccceE
Confidence            44445566777666554444444556889988 4556 999999999999999999999998 88  56 5555332222


Q ss_pred             ee----cceEEEEeee--cCCeEEEEEEEecCcc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC--
Q psy8771         154 PV----GRNVLTLDRV--TESENYTCIAASVLGV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP--  224 (904)
Q Consensus       154 ~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~--  224 (904)
                      .+    ..++|.|.+|  .|.|.|+|.|.|..|. .+..+.|.|.       .+|.+|..+.+...+.+++.|+|..+  
T Consensus       215 ~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~-------~~P~~~~~p~~~~~~~~~v~l~w~~~~~  287 (731)
T 2v5y_A          215 VTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVK-------EPPVPIAPPQLASVGATYLWIQLNANSI  287 (731)
T ss_dssp             ECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEE-------CCCCBSSCCEEEEECSSCEEEECCCSSB
T ss_pred             EeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEe-------cCCCCCCCcceeccCCceEEEEeCCccc
Confidence            22    2468999999  6999999999999998 7778889998       78888888888888999999999976  


Q ss_pred             --CccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEE--cCCCCCCCCCCeEEecCCCCCCCCCCc
Q psy8771         225 --SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAV--NNLGRGPPSSPAVITTGETEPGTAPRD  300 (904)
Q Consensus       225 --~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~--n~~g~s~~s~~~~~~t~~~~p~~~p~~  300 (904)
                        +.++.+|.|+|+..  ...|..+.......++|.+|.|++.|.|+|.|.  |..|.+.++....+.+.+.        
T Consensus       288 ~g~~~i~~Y~v~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~--------  357 (731)
T 2v5y_A          288 NGDGPIVAREVEYCTA--SGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA--------  357 (731)
T ss_dssp             SSCSCCCEEEEEEEES--SSSCEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC--------
T ss_pred             CCCCccEEEEEEEEEC--CCCceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC--------
Confidence              36799999999986  334555444455889999999999999999999  9998877665444433221        


Q ss_pred             eEecccCCCeeEEEecCCCCCCceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCC
Q psy8771         301 VQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTP  380 (904)
Q Consensus       301 l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~  380 (904)
                                                                                                      
T Consensus       358 --------------------------------------------------------------------------------  357 (731)
T 2v5y_A          358 --------------------------------------------------------------------------------  357 (731)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCcccccccccceeeeEEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEe
Q psy8771         381 GFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQ  460 (904)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~  460 (904)
                                                                                                      
T Consensus       358 --------------------------------------------------------------------------------  357 (731)
T 2v5y_A          358 --------------------------------------------------------------------------------  357 (731)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCC--CCceeeEEEEEEeCCCCCCcceEE---Eee
Q psy8771         461 SPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETP--NGQITGYKVYYTQDQSLPMSAWET---QVV  535 (904)
Q Consensus       461 ~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~--~~~i~~Y~v~~~~~~~~~~~~~~~---~~~  535 (904)
                                         .|+.+|.++.+...+.+++.|+|++|...  ++.+.+|.|+|+.........|..   ...
T Consensus       358 -------------------~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~  418 (731)
T 2v5y_A          358 -------------------DPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTE  418 (731)
T ss_dssp             -------------------CCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSS
T ss_pred             -------------------CCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEec
Confidence                               34567778888888888888888886432  346778999998765322222222   222


Q ss_pred             cCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCC--CceEEecCCCeEEEEEeCCCCCCCCceEE
Q psy8771         536 DNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPR--DLRAVDIQETAVTLAWSKPTHSGENIISY  613 (904)
Q Consensus       536 ~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~--~~~~~~~~~~~~~l~W~~~~~~~~~~~~y  613 (904)
                      .....+.+.+|.|++.|.|+|+|+|..|.|. |..+.+.|....|.+|.  .+.... ..+++.|+|.+|..        
T Consensus       419 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~~~~~~~~-~~~si~l~W~~P~~--------  488 (731)
T 2v5y_A          419 NSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPTESIQGST-FEEKIFLQWREPTQ--------  488 (731)
T ss_dssp             CSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCCCCCTTTCEEEE-ETTEEEEECCCCSC--------
T ss_pred             CCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCCCCCcceEEeee-cCCeEEEEEcCCCC--------
Confidence            5567899999999999999999999999984 88899999988887665  444443 46789999998875        


Q ss_pred             EEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc---------cceEEecccceEEEeCCCC
Q psy8771         614 ELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA---------KHHRRIGLVETYSLTGLYP  684 (904)
Q Consensus       614 ~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~---------~~~~~~~~~~~~~l~~L~p  684 (904)
                                                       .++.+.+|.|+|+......         .........++++|.+|+|
T Consensus       489 ---------------------------------~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p  535 (731)
T 2v5y_A          489 ---------------------------------TYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYP  535 (731)
T ss_dssp             ---------------------------------CSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCT
T ss_pred             ---------------------------------CCCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCC
Confidence                                             4556777777776654321         1223345567999999999


Q ss_pred             CcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcE-EEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC
Q psy8771         685 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVS-CEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD  763 (904)
Q Consensus       685 ~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~-~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~  763 (904)
                      ++.|.|+|+|+|..|.|.++ .+.++|...+|..|+.... ....+.+++.|+|.+|  ...+|+|.+|.|+|+......
T Consensus       536 ~t~Y~~~V~A~n~~G~g~~s-~~~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~pp--~~~~g~I~~Y~v~~~~~~~~~  612 (731)
T 2v5y_A          536 GTTYSFTIRASTAKGFGPPA-TNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPA--HSRGAPVSVYQIVVEEERPRR  612 (731)
T ss_dssp             TEEEEEEEEEEETTEEEEEE-EEEEECCCCCCCC----------------------------------------------
T ss_pred             CCEEEEEEEEEeCCccCCCc-ccEEEcCCCCCCCCCcccccccccCCceEEEEEeCC--CCCCCceEEEEEEEEecCCCC
Confidence            99999999999999999888 5888999888886544332 2456788999999988  568899999999998765321


Q ss_pred             Ccc-----EE---------------------------------EEec---CcceEEecCCCCCceEEEEEEEeeCCCCCC
Q psy8771         764 SEA-----SI---------------------------------VTLK---NQTSFVLDELKKWTEYRIWVLAGTSIGDGP  802 (904)
Q Consensus       764 ~~~-----~~---------------------------------~~~~---~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~  802 (904)
                      ...     .+                                 +.+.   ....+....|+|++.|.|+|+|.+..|.|.
T Consensus       613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aa~~~p~~~~~~~~~~vg~~~~~~~~~n~~L~p~~~Y~i~v~A~s~~g~~~  692 (731)
T 2v5y_A          613 TKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGET  692 (731)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CccccccccCcccccCHHHHhhcCCcceEEEEcChhhCcccCCEEECCCCeECCEECCCCCCCCceEEEEEEEEecCCCc
Confidence            000     00                                 0111   112233455999999999999999999999


Q ss_pred             CCCcEEeecC
Q psy8771         803 SSYPITIRTH  812 (904)
Q Consensus       803 ~s~~~~~~t~  812 (904)
                      .+..+.+.|.
T Consensus       693 ~~~~v~~~t~  702 (731)
T 2v5y_A          693 KIDCVQVATK  702 (731)
T ss_dssp             ----------
T ss_pred             EeeeEEEecc
Confidence            9988888887

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=100.00  E-value=3.4e-39  Score=380.71  Aligned_cols=359  Identities=20%  Similarity=0.269  Sum_probs=224.8

Q ss_pred             eEEEecCCceEEEEecCCCCC-CCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE--eCCCC
Q psy8771         488 VQVRPLSSSTMVIQWDEPETP-NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF--TSVGP  564 (904)
Q Consensus       488 l~v~~~~~~~~~l~W~~p~~~-~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~--~~~g~  564 (904)
                      +.+...+.+++.|+|.++... ++.+.+|.|+|+...    ..|..........+.+.+|.|++.|.|+|+|.  |..|.
T Consensus       268 p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~----~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~  343 (731)
T 2v5y_A          268 PQLASVGATYLWIQLNANSINGDGPIVAREVEYCTAS----GSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGT  343 (731)
T ss_dssp             CEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESS----SSCEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCS
T ss_pred             cceeccCCceEEEEeCCcccCCCCccEEEEEEEEECC----CCceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCcc
Confidence            344455778999999986543 368999999999864    45666666667889999999999999999999  99999


Q ss_pred             CCCCCcEEEecCCCCC-CCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccC
Q psy8771         565 GPLSAPVLVKTQQGVP-SQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK  643 (904)
Q Consensus       565 ~~~S~~~~~~t~~~~p-~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~  643 (904)
                      +.+|....+.+....| .+|.++.+...+.+++.|+|.++...+                                    
T Consensus       344 s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~------------------------------------  387 (731)
T 2v5y_A          344 GSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNV------------------------------------  387 (731)
T ss_dssp             CCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHH------------------------------------
T ss_pred             ccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCccc------------------------------------
Confidence            9999988888877666 688999999999999999999984310                                    


Q ss_pred             CCCCCCceeeEEEEEEeCCccccce------EEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771         644 PTHSGENIISYELYWNDTYAKAKHH------RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG  717 (904)
Q Consensus       644 ~~~~~~~~~~y~v~~~~~~~~~~~~------~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~  717 (904)
                         .++.+.+|.|+|+......+..      ........+.|.+|.|++.|.|+|+|+|..|.|. |..+.++|...+|.
T Consensus       388 ---~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~  463 (731)
T 2v5y_A          388 ---TRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPG  463 (731)
T ss_dssp             ---HCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCC
T ss_pred             ---ccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCC
Confidence               1345778999888765432211      1123457899999999999999999999999984 88899999999888


Q ss_pred             CCC-CCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCC------ccEEEEec-CcceEEecCCCCCceEE
Q psy8771         718 APP-QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS------EASIVTLK-NQTSFVLDELKKWTEYR  789 (904)
Q Consensus       718 ~~P-~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~------~~~~~~~~-~~~~~~i~~L~p~t~Y~  789 (904)
                      .+| ..+.+.. ..+++.|+|++|  ...||.+.+|.|+|+..+....      ........ ..+.++|.+|+|++.|.
T Consensus       464 ~p~~~~~~~~~-~~~si~l~W~~P--~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~  540 (731)
T 2v5y_A          464 AVPTESIQGST-FEEKIFLQWREP--TQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYS  540 (731)
T ss_dssp             CCCTTTCEEEE-ETTEEEEECCCC--SCCSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEEE
T ss_pred             CCCcceEEeee-cCCeEEEEEcCC--CCCCCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEEE
Confidence            765 4666654 478999999998  4678999999999998754211      11222333 78899999999999999


Q ss_pred             EEEEEeeCCCCCCCCCcEEeecCCCCCCCC-----c-------cCCcceeeCCCCCceeeeeeeecCCce----------
Q psy8771         790 IWVLAGTSIGDGPSSYPITIRTHEDDPSEV-----C-------PTQNDFRKNKKTNGSNFKGGYLNDPMR----------  847 (904)
Q Consensus       790 ~~V~a~~~~g~g~~s~~~~~~t~~~~P~~v-----~-------~~~~~W~~p~~~~~~~~~~~~~~~~~~----------  847 (904)
                      |+|+|.|..|.|+++. +.++|...+|++.     .       .+.++|.+|...+|.|..|.+......          
T Consensus       541 ~~V~A~n~~G~g~~s~-~~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~pp~~~~g~I~~Y~v~~~~~~~~~~~~~~~~  619 (731)
T 2v5y_A          541 FTIRASTAKGFGPPAT-NQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEI  619 (731)
T ss_dssp             EEEEEEETTEEEEEEE-EEEECCCCCCCC---------------------------------------------------
T ss_pred             EEEEEEeCCccCCCcc-cEEEcCCCCCCCCCcccccccccCCceEEEEEeCCCCCCCceEEEEEEEEecCCCCCcccccc
Confidence            9999999999999884 8888988777541     1       122399988877777765544211000          


Q ss_pred             EE----------------------------------ecCCC---eeEEEEcCCCCCcEEEEEEEEEecCCCCCCCCceEE
Q psy8771         848 FD----------------------------------VSDGG---ALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETI  890 (904)
Q Consensus       848 ~~----------------------------------~~~~~---~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~  890 (904)
                      ..                                  ..-++   ...|...+|+||+.|.|+|+|++..|.|..+..+.+
T Consensus       620 ~~~~~~~~~~~~~~~~~~~~y~aa~~~p~~~~~~~~~~vg~~~~~~~~~n~~L~p~~~Y~i~v~A~s~~g~~~~~~~v~~  699 (731)
T 2v5y_A          620 LKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETKIDCVQV  699 (731)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccCcccccCHHHHhhcCCcceEEEEcChhhCcccCCEEECCCCeECCEECCCCCCCCceEEEEEEEEecCCCcEeeeEEE
Confidence            00                                  00000   123444569999999999999999999988888888


Q ss_pred             ecCC
Q psy8771         891 KTPG  894 (904)
Q Consensus       891 ~t~~  894 (904)
                      .|.+
T Consensus       700 ~t~~  703 (731)
T 2v5y_A          700 ATKG  703 (731)
T ss_dssp             ----
T ss_pred             eccc
Confidence            8873

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=100.00  E-value=6e-38  Score=363.75  Aligned_cols=446  Identities=18%  Similarity=0.288  Sum_probs=319.1

Q ss_pred             CCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCC-cceEEEeecCCeEEEEEeCC----CccceEEEEEEEeCCC-
Q psy8771         167 ESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP-LDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAA-  240 (904)
Q Consensus       167 d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p-~~l~~~~~~~~sv~l~W~~~----~~~~~~y~v~~~~~~~-  240 (904)
                      ..|.+.| +.|..|..-......+.       ..|.+| .+|++...+.+++.|+|+++    ..++. |.|+|+...+ 
T Consensus       134 c~g~~~C-c~n~cG~~C~~P~~~~~-------~~P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~  204 (680)
T 1zlg_A          134 CSGVKKC-CSNGCGHTCQVPKTLYK-------GVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGI  204 (680)
T ss_pred             CCCcccc-ccccccccccccceeee-------cccccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCC
Confidence            5577777 45555653332233344       788899 89999999999999999987    34566 9999997632 


Q ss_pred             ---C---CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCC-CeEEecCCCCCCCCCCceEecccCCCeeEE
Q psy8771         241 ---N---TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSS-PAVITTGETEPGTAPRDVQVRPLSSSTMVI  313 (904)
Q Consensus       241 ---~---~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~-~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l  313 (904)
                         .   ..|..+.......++|.+|.|++.|.|+|.|.|..|.+.++. ...+.+.                       
T Consensus       205 ~~~~~~~~~w~~v~~~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~-----------------------  261 (680)
T 1zlg_A          205 HPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSS-----------------------  261 (680)
T ss_pred             CcCccccCceEEEEecCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcC-----------------------
Confidence               1   456666555567899999999999999999999888432211 1111100                       


Q ss_pred             EecCCCCCCceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccc
Q psy8771         314 QWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRI  393 (904)
Q Consensus       314 ~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~  393 (904)
                                                                                                      
T Consensus       262 --------------------------------------------------------------------------------  261 (680)
T 1zlg_A          262 --------------------------------------------------------------------------------  261 (680)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeEEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCce
Q psy8771         394 GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIP  473 (904)
Q Consensus       394 ~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~  473 (904)
                                                                                                      
T Consensus       262 --------------------------------------------------------------------------------  261 (680)
T 1zlg_A          262 --------------------------------------------------------------------------------  261 (680)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeecCCCCCCCCCCeEEEec--CCc---eEEEEecCCCCCCCceeeEEEEEEeC-C---CCCCcceEEEee-cCceEEEE
Q psy8771         474 VRTKQYEPGTAPRDVQVRPL--SSS---TMVIQWDEPETPNGQITGYKVYYTQD-Q---SLPMSAWETQVV-DNNQLTTI  543 (904)
Q Consensus       474 ~~t~~~~p~~~p~~l~v~~~--~~~---~~~l~W~~p~~~~~~i~~Y~v~~~~~-~---~~~~~~~~~~~~-~~~~~~~~  543 (904)
                         ....|+.+|.++.+...  +.+   +|.|+|++|...++.+.+|.|+|+.. +   ......|..... ...+.+.|
T Consensus       262 ---~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l  338 (680)
T 1zlg_A          262 ---KDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVIL  338 (680)
T ss_pred             ---CCCCCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEe
Confidence               00034578889998887  777   99999999887788999999999832 1   112235655444 45578999


Q ss_pred             cCCCCCCeEEEEEEEEeCCCCCCCCCc---EEEecCCCCCCCCCCceEEecCCCeEEE-----------EEeCCCCCCCC
Q psy8771         544 SDLTPHTIYTIRVQAFTSVGPGPLSAP---VLVKTQQGVPSQPRDLRAVDIQETAVTL-----------AWSKPTHSGEN  609 (904)
Q Consensus       544 ~~L~p~t~Y~~~V~a~~~~g~~~~S~~---~~~~t~~~~p~~p~~~~~~~~~~~~~~l-----------~W~~~~~~~~~  609 (904)
                      .+|.|++.|.|+|+|+|..|.|++|..   +.+.|....|. |.++.+...+.+++.|           +|.++... +.
T Consensus       339 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~P~-p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~~-~~  416 (680)
T 1zlg_A          339 EKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNN-KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQ-DG  416 (680)
T ss_pred             CCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCCCC-ccccccccccCccccccccccCCCccccccCCccc-CC
Confidence            999999999999999999999988877   78888887777 8889988888888877           99998643 34


Q ss_pred             ceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc------cceEEecccceEEEeCCC
Q psy8771         610 IISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA------KHHRRIGLVETYSLTGLY  683 (904)
Q Consensus       610 ~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~------~~~~~~~~~~~~~l~~L~  683 (904)
                      +.+|+|.|..                        .  ..+.+.+|.|+|.......      .........+++.|.+|+
T Consensus       417 ~~~y~v~w~~------------------------~--~~~~v~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~  470 (680)
T 1zlg_A          417 QLQVKVYWKK------------------------T--EDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLS  470 (680)
T ss_pred             cceEEEEEeC------------------------C--CCCccceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCC
Confidence            5677777654                        1  2234688999886542211      112234456789999999


Q ss_pred             CCcEEEEEEEEEcCCCCCCCCCCeeEEecC-----------------CCCC-----CCCCC----cEEEecCCCEEEEEe
Q psy8771         684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQ-----------------YVPG-----APPQN----VSCEPLSSTSIRISW  737 (904)
Q Consensus       684 p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~-----------------~~p~-----~~P~~----l~~~~~~~~~v~l~W  737 (904)
                      |++.|.|+|+|+|..|.+... ...+.|..                 ..|.     .+|.+    +.+...+.+ +.|+|
T Consensus       471 p~t~Y~~~V~A~n~~G~s~~~-~~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v~~~P~~l~~~v~v~~~~~t-i~lsW  548 (680)
T 1zlg_A          471 FSCKYKVTVQPIRPKSHSKAE-AVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNIT-GHFSW  548 (680)
T ss_pred             CCCeEEEEEEEecCCCCCCcc-ccceeCCCccccccCCccccccCCCCccccccccCCccccceeEEEeccCce-EEEEe
Confidence            999999999999999965421 12222211                 0111     46777    566666555 99999


Q ss_pred             cCCCCCCCCccEEEEEEEEEEccCCCC----ccEE----EEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEE
Q psy8771         738 EPPPVERSNGHIVYYKLQFVETGRSDS----EASI----VTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPIT  808 (904)
Q Consensus       738 ~~~~~~~~~g~~~~Y~v~~~~~~~~~~----~~~~----~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~  808 (904)
                      ++|.. ..||.|.+|.|+|+.......    ....    ..+. +.+.++|.+|+|++.|.|+|+|.|..|.|+. .++.
T Consensus       549 ~pP~~-~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~  626 (680)
T 1zlg_A          549 KMAKA-NLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKT  626 (680)
T ss_pred             cCCCC-CCCCCceeEEEEEEEccCCCccccccceeeecccccCCcccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceE
Confidence            99963 348999999999987643221    0011    1122 5789999999999999999999999999988 7788


Q ss_pred             eecCCCCCCCCccC------CcceeeCCCCCceeeee
Q psy8771         809 IRTHEDDPSEVCPT------QNDFRKNKKTNGSNFKG  839 (904)
Q Consensus       809 ~~t~~~~P~~v~~~------~~~W~~p~~~~~~~~~~  839 (904)
                      ++|...+|++...+      .++|++|...+|..+.+
T Consensus       627 ~~T~~~~P~~P~~l~v~~~~~l~W~pP~~~~G~~I~~  663 (680)
T 1zlg_A          627 FRTPELPPSSAHRSHLKHRHPHHYKPSPERYGKPIPN  663 (680)
T ss_pred             EECCCCCCCCCCCCeEEeccceeECCCCCCCCCccce
Confidence            99988877553322      33999998888865533

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}

Probab=100.00  E-value=9e-39  Score=369.02  Aligned_cols=398  Identities=18%  Similarity=0.240  Sum_probs=292.6

Q ss_pred             Cceeee-eccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEE--EecCCceEEEEecCCCCCCCceeeEE
Q psy8771         440 PGFGEQ-ALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQV--RPLSSSTMVIQWDEPETPNGQITGYK  516 (904)
Q Consensus       440 ~~~~~~-~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v--~~~~~~~~~l~W~~p~~~~~~i~~Y~  516 (904)
                      ..|.+. +|.+++.|.|+|.|.|..|.+. +....+.+....++.+|.++.+  ...+.+++.|+|++|...++.+.+|.
T Consensus       157 ~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~  235 (589)
T 3l5h_A          157 TSCTVDYSTVYFVNIEVWVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYN  235 (589)
T ss_dssp             SCCBCCSCCCSSSCEEECEEEEESSCCBC-CCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEE
T ss_pred             EEEEECCCCchheeEEEEEEEEeCCCCcc-cccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEE
Confidence            445666 7999999999999999999863 4445555554456789999998  45688899999999877677889999


Q ss_pred             EEEEeCCCCCCcceEEEe----ecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCC---CCcEEEecCCCCCC-CCCCceE
Q psy8771         517 VYYTQDQSLPMSAWETQV----VDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPL---SAPVLVKTQQGVPS-QPRDLRA  588 (904)
Q Consensus       517 v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~---S~~~~~~t~~~~p~-~p~~~~~  588 (904)
                      |+|+..+.   ..|....    .....++.+.+|.|++.|.|+|+|.|..|.|.+   |..+.+.|....|. +|..+..
T Consensus       236 v~~~~~~~---~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~  312 (589)
T 3l5h_A          236 IQYRTKDA---STWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYK  312 (589)
T ss_dssp             EEEEETTC---SCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEE
T ss_pred             EEECCCCC---CCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEE
Confidence            99998764   3354432    234578999999999999999999999988765   56667788777774 5654443


Q ss_pred             ----EecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcc
Q psy8771         589 ----VDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK  664 (904)
Q Consensus       589 ----~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~  664 (904)
                          ...+.+++.|.|+++..                                       ...++.+.+|.|.|+..+..
T Consensus       313 v~~~~~~~~~~v~l~W~p~~~---------------------------------------~~~~g~i~~Y~v~~~~~~~~  353 (589)
T 3l5h_A          313 IDPSHTQGYRTVQLVWKTLPP---------------------------------------FEANGKILDYEVTLTRWKSH  353 (589)
T ss_dssp             CCSCSSTTSCCEEEEECCCCT---------------------------------------TTSSSCCCEEEEEECCTTSC
T ss_pred             eecCcCCCcceEEEEEeeCCc---------------------------------------hhccCceeeEEEEEecCCCC
Confidence                24567899999997421                                       12566788888888665443


Q ss_pred             ccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCC
Q psy8771         665 AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER  744 (904)
Q Consensus       665 ~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~  744 (904)
                      ...  .......++  .|.+++.|.|+|+|+|..|.|.++. +.+.+....+..||.++.+... .+++.|+|++|..  
T Consensus       354 ~~~--~~~~~~~~~--~l~~~~~Y~~~V~A~n~~G~~~~s~-~~~~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~~--  425 (589)
T 3l5h_A          354 LQN--YTVNATKLT--VNLTNDRYLATLTVRNLVGKSDAAV-LTIPACDFQATHPVMDLKAFPK-DNMLWVEWTTPRE--  425 (589)
T ss_dssp             CCB--CCCSSSCCE--ECCCSSCCCEEEEEEBTTBCCCCCC-CCCCCTTCCCCSCCCSCEEEEC-SSSEEEECCCCSS--
T ss_pred             cee--eccCCceEE--EEeCCCCEEEEEEEEeCCccCCCeE-EEeecccccCCCCcceEEEEEC-CCeEEEEEECCCC--
Confidence            221  112223443  3899999999999999999998875 3344433344556778888765 6899999999842  


Q ss_pred             CCccEEEEEEEEEEccCCCC-ccEEEEec--CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCCC---
Q psy8771         745 SNGHIVYYKLQFVETGRSDS-EASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE---  818 (904)
Q Consensus       745 ~~g~~~~Y~v~~~~~~~~~~-~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~~---  818 (904)
                         .+.+|.|+|+..+.... ...+..+.  ....+.+.+|.|++.|.|+|+|.+..|.|..+ .+.+.|...+|..   
T Consensus       426 ---~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~-~~~~~t~~~~P~~pp~  501 (589)
T 3l5h_A          426 ---SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SIKAYLKQAPPSKGPT  501 (589)
T ss_dssp             ---CCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSCCCSSSEEEEEECBEETTEECCCE-EEEEESSCCCCSSCCC
T ss_pred             ---CccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhccccCcEEEEEEEEEeCCcccCCE-EEEEEeccCCCCCCCe
Confidence               58899999998765322 11222333  45567779999999999999999999988775 4667777666633   


Q ss_pred             Ccc-------CCcceeeC--CCCCceeeeeeee----cCCceEEecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCCCCC
Q psy8771         819 VCP-------TQNDFRKN--KKTNGSNFKGGYL----NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRS  885 (904)
Q Consensus       819 v~~-------~~~~W~~p--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s  885 (904)
                      +..       +.++|.++  ...+|.|..|.+.    ++......++.+.+++.|.+|.||+.|.|+|+|.|..| |..|
T Consensus       502 l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-~~~S  580 (589)
T 3l5h_A          502 VRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDG  580 (589)
T ss_dssp             CCEECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCSSCCCCCEEECTTCCBCCBCSCCSSCCEECCEEEEETTE-EEEC
T ss_pred             EEEeecccceEEEEecCCCHHHcCccceeEEEEEEeCCCCeEEEEeCCcccEEEecCCCCCCEEEEEEEEEeCCC-CCCC
Confidence            221       22299974  3556766655543    22333345678889999999999999999999999999 8899


Q ss_pred             CceEEecC
Q psy8771         886 KPETIKTP  893 (904)
Q Consensus       886 ~~~~~~t~  893 (904)
                      ..+.++|.
T Consensus       581 ~~~~~~T~  588 (589)
T 3l5h_A          581 PEFTFTTP  588 (589)
T ss_dssp             CCCEECCC
T ss_pred             CCeEEecC
Confidence            99999885

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B

Probab=100.00  E-value=6e-35  Score=316.51  Aligned_cols=344  Identities=21%  Similarity=0.327  Sum_probs=267.8

Q ss_pred             CCCCCCCeEEEecCCc-eEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         481 PGTAPRDVQVRPLSSS-TMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~-~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      |+.+|.+|++...+.+ ++.|+|+++..  +.+.+|+|+|+...+.....|........+++.+.+|.|++.|.|+|+|.
T Consensus         2 P~~~P~~l~~~~~~~~~sv~l~W~~~~~--~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~   79 (375)
T 3t1w_A            2 PLSPPTNLHLEANPDTGVLTVSWERSTT--PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTV   79 (375)
T ss_dssp             CCCCCEEEEEEEETTTTEEEEEEECCSC--SSCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEEE
T ss_pred             CCCCCCccEEEecCCCeEEEEEEeCCCC--CCeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEEE
Confidence            6789999999999989 99999999753  46899999999977544445555555778899999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEE
Q psy8771         560 TSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTL  639 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l  639 (904)
                      |..|.   |......+....| +|.++.+...+.+++.|+|.++                                    
T Consensus        80 ~~~g~---s~~~~~~~~~~~p-~p~~l~~~~~~~~si~l~W~~~------------------------------------  119 (375)
T 3t1w_A           80 KDDKE---SVPISDTIIPEVP-QLTDLSFVDITDSSIGLRWTPL------------------------------------  119 (375)
T ss_dssp             ETTEE---CCCEEEEECCCCC-CCSCCEEECCCSSEEEEECCCC------------------------------------
T ss_pred             cCCCC---CCcEEeeEcCCCC-CCceEEEEecCCCeEEEEEECC------------------------------------
Confidence            98764   4455566656565 4899999999999999999987                                    


Q ss_pred             eccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771         640 AWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG  717 (904)
Q Consensus       640 ~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~  717 (904)
                             .++.+.+|.|+|+..+....  ..........+.|.+|.|++.|.|+|+|+|..|.|.++. ..+.|   .|.
T Consensus       120 -------~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~-~~~~t---~~~  188 (375)
T 3t1w_A          120 -------NSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTT-LTQQT---AVP  188 (375)
T ss_dssp             -------CCTTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEE-EEEEC---CCC
T ss_pred             -------CCCCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCee-eeeec---CCC
Confidence                   34578999999988765543  223445667999999999999999999999999887764 44445   233


Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                       +|.++.+...+.+++.|+|++|.    ++.+.+|.|+|+..+.... .....+. ..+.+.+.+|.+++.|.|+|+|.|
T Consensus       189 -~p~~l~~~~~~~~si~l~W~~p~----~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~  262 (375)
T 3t1w_A          189 -PPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEED-VAELSISPSDNAVVLTNLLPGTEYVVSVSSVY  262 (375)
T ss_dssp             -CCEEEEEESCCSSCEEEEEECCS----SCCCCEEEEEEEEGGGTTC-CEEEEECTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred             -CCceeEEEecccCEEEEEEcCCC----CCCccEEEEEEEeCCCCCC-cEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEc
Confidence             67899999899999999999973    3678999999998764332 2334444 779999999999999999999999


Q ss_pred             CCCCCCCCCcEEeecCCCCCCCCccC-------CcceeeCC-CCCceeeeeeeecC--CceEEecCCCeeEEEEcCCCCC
Q psy8771         797 SIGDGPSSYPITIRTHEDDPSEVCPT-------QNDFRKNK-KTNGSNFKGGYLND--PMRFDVSDGGALELNVTGLQPD  866 (904)
Q Consensus       797 ~~g~g~~s~~~~~~t~~~~P~~v~~~-------~~~W~~p~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~  866 (904)
                      ..|.|..+. ..+.|.+.+|..+...       .++|++|. ...+|.+.+...+.  ......+....+++.|.+|.||
T Consensus       263 ~~g~s~~~~-~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~  341 (375)
T 3t1w_A          263 EQHESTPLR-GRQKTGLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPG  341 (375)
T ss_dssp             TTEECCCEE-EEEECCCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEEEEEETTCCEEEECSCCTT
T ss_pred             CCCcCCcee-eEEecCCCCCCccEeeeccCCEEEEEECCCCcceeeEEEEEEECCCCCcceeEEcCCCccEEEECCCCCC
Confidence            998887653 5567777777553322       22999764 23445554444332  2333456788899999999999


Q ss_pred             cEEEEEEEEEecCCCCCC
Q psy8771         867 TIYTIQVAALTRKGDGDR  884 (904)
Q Consensus       867 t~Y~~~v~a~n~~G~g~~  884 (904)
                      +.|.|+|+|+|..|.|+.
T Consensus       342 t~Y~~~V~A~~~~G~s~p  359 (375)
T 3t1w_A          342 TEYVVSIVALNGREESPL  359 (375)
T ss_dssp             CEEEEEEEEEETTEECCC
T ss_pred             CEEEEEEEEECCCCCCCc
Confidence            999999999999998844

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A

Probab=100.00  E-value=8.5e-35  Score=314.58  Aligned_cols=345  Identities=19%  Similarity=0.278  Sum_probs=263.3

Q ss_pred             CCCCCCCeEEEecCCc-eEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         481 PGTAPRDVQVRPLSSS-TMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~-~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      |+.+|.+|++...+.+ ++.|+|+++.  ++.+.+|.|+++...+.....|........+++.+.+|.|++.|.|+|+|.
T Consensus         1 Pp~~P~~l~~~~~~~~~sv~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~   78 (368)
T 1fnf_A            1 PLSPPTNLHLEANPDTGVLTVSWERST--TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTV   78 (368)
T ss_dssp             CCCCCEEEEEEECSSSSCEEEEEECCS--CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEE
T ss_pred             CCCCCcceEEEecCCCcEEEEEEeCCC--CCCceEEEEEEEECCCCCCceeEEEecCCcCEEEECCCCCCCEEEEEEEEE
Confidence            5689999999988876 6999999986  367899999999876544445666566778899999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEE
Q psy8771         560 TSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTL  639 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l  639 (904)
                      |..|.+..   ....+.+.+ ++|.++.+...+.+++.|+|.++.                                   
T Consensus        79 ~~~g~s~~---~~~~~~~~~-~~p~~l~~~~~~~~si~l~W~~p~-----------------------------------  119 (368)
T 1fnf_A           79 KDDKESVP---ISDTIIPAV-PPPTDLRFTNIGPDTMRVTWAPPP-----------------------------------  119 (368)
T ss_dssp             ETTEECCC---EEEEECCCC-CCCEEEEEESCCSSCEEEEEECCT-----------------------------------
T ss_pred             cCCCccCc---eeeeecCCC-cCCceeEEEEcCCCeEEEEeeCCC-----------------------------------
Confidence            99886543   334443333 478999999989999999999983                                   


Q ss_pred             eccCCCCCCCceeeEEEEEEeCCcccc-ce-EEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771         640 AWSKPTHSGENIISYELYWNDTYAKAK-HH-RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG  717 (904)
Q Consensus       640 ~w~~~~~~~~~~~~y~v~~~~~~~~~~-~~-~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~  717 (904)
                              ++.+.+|.|+|+..+.... .. .......++.+.+|.|++.|.|+|+|++..|.+.+   ....+.  .+.
T Consensus       120 --------~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~---~~~~~~--~~~  186 (368)
T 1fnf_A          120 --------SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTP---LRGRQK--TGL  186 (368)
T ss_dssp             --------TCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCC---EEEEEE--CCC
T ss_pred             --------CCCCcEEEEEEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCC---eEeeec--CCC
Confidence                    4568889999987665432 22 23445679999999999999999999999887654   333222  123


Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      .+|.+|.+...+.+++.|+|+++.     +.+.+|.|+++..+.... .....+. ..+.+++.+|.+++.|.|+|+|.|
T Consensus       187 ~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n  260 (368)
T 1fnf_A          187 DSPTGIDFSDITANSFTVHWIAPR-----ATITGYRIRHHPEHFSGR-PREDRVPHSRNSITLTNLTPGTEYVVSIVALN  260 (368)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECCS-----SCCSEEEEEEECSCCSSC-CEEEEEETTCCEEEEESCCTTCEEEEEEEEEE
T ss_pred             CCCCccEEEEccCCEEEEEEeCCC-----CCcCEEEEEEecCCCCCC-ccEEEeCCCcCEEEECCCCCCCEEEEEEEEEe
Confidence            367899999999999999999873     568999999997764322 2334444 888999999999999999999999


Q ss_pred             CCCCCCCCCcEEeecCCCCCCCCcc-------CCcceeeCCC-CCceeeeeeeecCC--ceEEecCCCeeEEEEcCCCCC
Q psy8771         797 SIGDGPSSYPITIRTHEDDPSEVCP-------TQNDFRKNKK-TNGSNFKGGYLNDP--MRFDVSDGGALELNVTGLQPD  866 (904)
Q Consensus       797 ~~g~g~~s~~~~~~t~~~~P~~v~~-------~~~~W~~p~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~  866 (904)
                      ..|.|..+. ....+.+.+|..+..       +.++|.+|.. ..+|.+.+...++.  .....+.+..+.+.+.+|+||
T Consensus       261 ~~g~~~~~~-~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~  339 (368)
T 1fnf_A          261 GREESPLLI-GQQSTVSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPG  339 (368)
T ss_dssp             TTEECCCEE-EEEECCCCSCEEEEEEEEETTEEEEEEECCSSCCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTT
T ss_pred             CCccCCccc-ccccCCCCCCCeeEEEecCCCEEEEEeeCCCCccceEEEEEEECCCCCccEEEEcCCCeeEEEecCCCCC
Confidence            999887654 456677777754332       2239997754 34555554433322  122345678899999999999


Q ss_pred             cEEEEEEEEEecCCCCCCCC
Q psy8771         867 TIYTIQVAALTRKGDGDRSK  886 (904)
Q Consensus       867 t~Y~~~v~a~n~~G~g~~s~  886 (904)
                      +.|.|+|+|+|..|.|..|.
T Consensus       340 t~Y~~~V~A~~~~G~g~~s~  359 (368)
T 1fnf_A          340 VDYTITVYAVTGRGDSPASS  359 (368)
T ss_dssp             CCEEEEEEEECCCSSSCCBC
T ss_pred             CEEEEEEEEeCCCCcCcccC
Confidence            99999999999999998765

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=100.00  E-value=3.7e-34  Score=331.92  Aligned_cols=371  Identities=17%  Similarity=0.265  Sum_probs=268.6

Q ss_pred             CCCC-CCeEEEecCCceEEEEecCCCCC-CCceeeEEEEEEeCCC-----CCCcceEEEeecCceEEEEcCCCCCCeEEE
Q psy8771         482 GTAP-RDVQVRPLSSSTMVIQWDEPETP-NGQITGYKVYYTQDQS-----LPMSAWETQVVDNNQLTTISDLTPHTIYTI  554 (904)
Q Consensus       482 ~~~p-~~l~v~~~~~~~~~l~W~~p~~~-~~~i~~Y~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~  554 (904)
                      |.+| .+|.+...+.+++.|+|++|.+. +..+. |.|+|+...+     .....|........+.+.+.+|.|++.|.|
T Consensus       160 P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~~~~~w~~v~~~~~~~~~i~~L~P~t~Y~f  238 (680)
T 1zlg_A          160 PLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQF  238 (680)
T ss_pred             cccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCccccCceEEEEecCCCeEEeCCCCCCCEEEE
Confidence            3567 79999999999999999998543 34566 9999998632     112467776666677899999999999999


Q ss_pred             EEEEEeCCC-CCCCCCcEEEecCC--CCCCCCCCceEEec--CCC---eEEEEEeCCCCCCCCceEEEEEeccCCCCCcc
Q psy8771         555 RVQAFTSVG-PGPLSAPVLVKTQQ--GVPSQPRDLRAVDI--QET---AVTLAWSKPTHSGENIISYELYWNDTYAKPRD  626 (904)
Q Consensus       555 ~V~a~~~~g-~~~~S~~~~~~t~~--~~p~~p~~~~~~~~--~~~---~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~  626 (904)
                      +|+|+|..| .+..+....+.+..  .+|.+|.++++...  +.+   ++.|+|.+|..                     
T Consensus       239 rV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~---------------------  297 (680)
T 1zlg_A          239 RVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEE---------------------  297 (680)
T ss_pred             EEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEEEecCCCC---------------------
Confidence            999999998 44444455566644  46778999999887  777   99999998865                     


Q ss_pred             eEEEeeccceEEEeccCCCCCCCceeeEEEEEEeC-C------ccccce-EEecccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771         627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT-Y------AKAKHH-RRIGLVETYSLTGLYPNTLYYIWLAAQSPR  698 (904)
Q Consensus       627 l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~-~------~~~~~~-~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~  698 (904)
                                          .++.+.+|.|+|+.. +      ...+.. ......+.++|.+|.|++.|.|+|+|+|..
T Consensus       298 --------------------~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~  357 (680)
T 1zlg_A          298 --------------------PDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYW  357 (680)
T ss_pred             --------------------CCCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECC
Confidence                                456677777777622 1      011212 223345789999999999999999999999


Q ss_pred             CCCCCCCC---eeEEecCCCCCCCCCCcEEEecCCCEEEE-----------EecCCCCCCCCccEEEEEEEEEEccCCCC
Q psy8771         699 GEGATTPP---IPVRTKQYVPGAPPQNVSCEPLSSTSIRI-----------SWEPPPVERSNGHIVYYKLQFVETGRSDS  764 (904)
Q Consensus       699 G~~~~s~~---~~~~t~~~~p~~~P~~l~~~~~~~~~v~l-----------~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~  764 (904)
                      |.|.++..   +.++|...+|.  |.++.+...+.+++.|           +|.+|..   ++.+.+|.|+|...+....
T Consensus       358 G~g~~S~~~~~v~~~T~~~~P~--p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~---~~~~~~y~v~w~~~~~~~v  432 (680)
T 1zlg_A          358 GQTRLKSAKVSLHFTSTHATNN--KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFY---QDGQLQVKVYWKKTEDPTV  432 (680)
T ss_pred             CcCCCCCCceeEEEECCCCCCC--ccccccccccCccccccccccCCCccccccCCcc---cCCcceEEEEEeCCCCCcc
Confidence            99988877   88888888776  6889888888888877           9999842   2345688888876553210


Q ss_pred             c------------------cEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecC-------------
Q psy8771         765 E------------------ASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTH-------------  812 (904)
Q Consensus       765 ~------------------~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~-------------  812 (904)
                      .                  ....... ..+.+.|.+|.|++.|.|+|+|.|..|.|.. ....|.|.             
T Consensus       433 ~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~~-~~~~f~T~~~~~~~~~~~~~v  511 (680)
T 1zlg_A          433 NRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKA-EAVFFTTPPCSALKGKSHKPI  511 (680)
T ss_pred             ceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCCc-cccceeCCCccccccCCcccc
Confidence            0                  0111122 6788999999999999999999999996542 11212221             


Q ss_pred             -------------CCCCCCC----c------cCCcceeeCC-CCCceeeeeeeecC----Cc----eE-------EecCC
Q psy8771         813 -------------EDDPSEV----C------PTQNDFRKNK-KTNGSNFKGGYLND----PM----RF-------DVSDG  853 (904)
Q Consensus       813 -------------~~~P~~v----~------~~~~~W~~p~-~~~~~~~~~~~~~~----~~----~~-------~~~~~  853 (904)
                                   ..+|..+    .      .+.++|++|. ..+|.|..|.+...    ..    ..       ..+.+
T Consensus       512 ~~~~~~~P~~~~v~~~P~~l~~~v~v~~~~~ti~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~  591 (680)
T 1zlg_A          512 GCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPS  591 (680)
T ss_pred             ccCCCCccccccccCCccccceeEEEeccCceEEEEecCCCCCCCCCceeEEEEEEEccCCCccccccceeeecccccCC
Confidence                         0233331    1      1334999886 34666655543221    11    10       11335


Q ss_pred             CeeEEEEcCCCCCcEEEEEEEEEecCCCCCCCCceEEecCCCCCCCCc
Q psy8771         854 GALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPH  901 (904)
Q Consensus       854 ~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~t~~~~p~~p~  901 (904)
                      +.+++.|.+|+|++.|.|+|+|+|..|.|+. .+..++|...+|.+|.
T Consensus       592 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~~~T~~~~P~~P~  638 (680)
T 1zlg_A          592 DHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKTFRTPELPPSSAH  638 (680)
T ss_pred             cccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceEEECCCCCCCCCC
Confidence            6789999999999999999999999999987 8889999998888887

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A

Probab=100.00  E-value=1.7e-33  Score=304.42  Aligned_cols=259  Identities=23%  Similarity=0.369  Sum_probs=201.3

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEEEEeCC
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQAFTSV  562 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~  562 (904)
                      +|.++.+...+.+++.|+|+++.  ++.+.+|.|+|+.....  ..|.... ......+.+.+|.|++.|.|+|+|.|..
T Consensus        97 ~p~~l~~~~~~~~si~l~W~~p~--~~~~~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  172 (368)
T 1fnf_A           97 PPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNE--EDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQ  172 (368)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCT--TCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCceeEEEEcCCCeEEEEeeCCC--CCCCcEEEEEEEECCCC--CccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCC
Confidence            67788888888999999999974  36789999999986543  2344433 3567789999999999999999999998


Q ss_pred             CCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771         563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS  642 (904)
Q Consensus       563 g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~  642 (904)
                      |.+..   ...... ..|.+|.++.+...+.+++.|+|.++.                                      
T Consensus       173 g~s~~---~~~~~~-~~~~~P~~l~~~~~~~~sv~l~W~~p~--------------------------------------  210 (368)
T 1fnf_A          173 HESTP---LRGRQK-TGLDSPTGIDFSDITANSFTVHWIAPR--------------------------------------  210 (368)
T ss_dssp             EECCC---EEEEEE-CCCCCCEEEEEESCCSSEEEEEEECCS--------------------------------------
T ss_pred             CCCCC---eEeeec-CCCCCCCccEEEEccCCEEEEEEeCCC--------------------------------------
Confidence            86543   333222 245678889998888999999999873                                      


Q ss_pred             CCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCC
Q psy8771         643 KPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP  720 (904)
Q Consensus       643 ~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P  720 (904)
                            +.+.+|.|+|+..+....  ..........+.+.+|.|++.|.|+|+|+|..|.|..+. ....+   .| .+|
T Consensus       211 ------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~-~~~~t---~p-~~P  279 (368)
T 1fnf_A          211 ------ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI-GQQST---VS-DVP  279 (368)
T ss_dssp             ------SCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEE-EEEEC---CC-CSC
T ss_pred             ------CCcCEEEEEEecCCCCCCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCccc-ccccC---CC-CCC
Confidence                  357888888887654322  233345667999999999999999999999998876542 22222   33 367


Q ss_pred             CCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCC
Q psy8771         721 QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIG  799 (904)
Q Consensus       721 ~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g  799 (904)
                      .++.+...+.+++.|+|+++..     .+.+|.|+|+..++... .....+. ..+.+++.+|++++.|.|+|+|.+..|
T Consensus       280 ~~l~~~~~~~~sv~l~W~~p~~-----~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G  353 (368)
T 1fnf_A          280 RDLEVVAATPTSLLISWDAPAV-----TVRYYRITYGETGGNSP-VQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRG  353 (368)
T ss_dssp             EEEEEEEEETTEEEEEEECCSS-----CCSEEEEEEEETTCCSC-CEEEEEETTCCEEEECSCCTTCCEEEEEEEECCCS
T ss_pred             CeeEEEecCCCEEEEEeeCCCC-----ccceEEEEEEECCCCCc-cEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCC
Confidence            8899988899999999999842     48899999998765432 2334455 888999999999999999999999999


Q ss_pred             CCCCCC
Q psy8771         800 DGPSSY  805 (904)
Q Consensus       800 ~g~~s~  805 (904)
                      .|++|.
T Consensus       354 ~g~~s~  359 (368)
T 1fnf_A          354 DSPASS  359 (368)
T ss_dssp             SSCCBC
T ss_pred             cCcccC
Confidence            998875

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B

Probab=100.00  E-value=3.2e-33  Score=302.96  Aligned_cols=261  Identities=18%  Similarity=0.278  Sum_probs=205.2

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCC
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVG  563 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g  563 (904)
                      +|.++.+...+.+++.|+|+++.  ++.+.+|.|+|+..+... ...........+.+.+.+|.|++.|.|+|+|.|..|
T Consensus        98 ~p~~l~~~~~~~~si~l~W~~~~--~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g  174 (375)
T 3t1w_A           98 QLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGI-PIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGG  174 (375)
T ss_dssp             CCSCCEEECCCSSEEEEECCCCC--CTTEEEEEEEEEESSSCC-SCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTE
T ss_pred             CCceEEEEecCCCeEEEEEECCC--CCCceEEEEEEEECCCCC-ceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCc
Confidence            37788998889999999999874  468999999999865431 112233446778899999999999999999999999


Q ss_pred             CCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccC
Q psy8771         564 PGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK  643 (904)
Q Consensus       564 ~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~  643 (904)
                      .|..+. ..+.+   .|++|.++.+...+.+++.|+|.++.                                       
T Consensus       175 ~s~~s~-~~~~t---~~~~p~~l~~~~~~~~si~l~W~~p~---------------------------------------  211 (375)
T 3t1w_A          175 ESAPTT-LTQQT---AVPPPTDLRFTNIGPDTMRVTWAPPP---------------------------------------  211 (375)
T ss_dssp             ECCCEE-EEEEC---CCCCCEEEEEESCCSSCEEEEEECCS---------------------------------------
T ss_pred             ccCCee-eeeec---CCCCCceeEEEecccCEEEEEEcCCC---------------------------------------
Confidence            877665 33334   44578999999889999999999973                                       


Q ss_pred             CCCCCCceeeEEEEEEeCCcccc-c-eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCC
Q psy8771         644 PTHSGENIISYELYWNDTYAKAK-H-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ  721 (904)
Q Consensus       644 ~~~~~~~~~~y~v~~~~~~~~~~-~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~  721 (904)
                          ++.+.+|.|+|+..+.... . .........+.+.+|.|++.|.|+|+|+|..|.|.++ ...+.|.   |. +|.
T Consensus       212 ----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~-~~~~~t~---p~-~P~  282 (375)
T 3t1w_A          212 ----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL-RGRQKTG---LD-SPT  282 (375)
T ss_dssp             ----SCCCCEEEEEEEEGGGTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE-EEEEECC---CC-CCE
T ss_pred             ----CCCccEEEEEEEeCCCCCCcEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCce-eeEEecC---CC-CCC
Confidence                4568899999988764332 2 2333445899999999999999999999998887654 3344442   33 578


Q ss_pred             CcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCC
Q psy8771         722 NVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGD  800 (904)
Q Consensus       722 ~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~  800 (904)
                      ++.+...+.+++.|+|++|.     +.+.+|.|+|+..+.... .....+. ..+.++|.+|.|++.|.|+|+|.|..|.
T Consensus       283 ~l~~~~~~~~sv~l~W~~p~-----~~~~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~  356 (375)
T 3t1w_A          283 GIDFSDITANSFTVHWIAPR-----ATITGYRIRHHPEHFSGR-PREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREE  356 (375)
T ss_dssp             EEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEETTCCSS-CEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred             ccEeeeccCCEEEEEECCCC-----cceeeEEEEEEECCCCCc-ceeEEcCCCccEEEECCCCCCCEEEEEEEEECCCCC
Confidence            89999889999999999873     668999999998775222 2334444 8889999999999999999999999998


Q ss_pred             CCCCC
Q psy8771         801 GPSSY  805 (904)
Q Consensus       801 g~~s~  805 (904)
                      |++..
T Consensus       357 s~p~s  361 (375)
T 3t1w_A          357 SPLLI  361 (375)
T ss_dssp             CCCEE
T ss_pred             CCcee
Confidence            87643

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=100.00  E-value=8.9e-31  Score=285.69  Aligned_cols=363  Identities=20%  Similarity=0.297  Sum_probs=255.7

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccccCC-----CCceee----cceEEEEeee--cCCeEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIELTP-----DDKLPV----GRNVLTLDRV--TESENY  171 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~~~-----~~~~~~----~~~~l~i~~l--~d~g~Y  171 (904)
                      +|.|.. +.+ ..+.+|++++|.|.+.|.|.|.|+|+|++ +..+..     ..|+.+    ..+.|.|.++  +|+|.|
T Consensus         1 ~P~i~~-~~~-~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y   78 (389)
T 2jll_A            1 QPHIIQ-LKN-ETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRY   78 (389)
T ss_dssp             CCEEEE-CCC-EEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEE
T ss_pred             CCeEEe-cCc-eEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEE
Confidence            477776 445 78889999999999999999999999982 444433     345554    3568999999  699999


Q ss_pred             EEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC------CCCeE
Q psy8771         172 TCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA------NTPYS  245 (904)
Q Consensus       172 ~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~------~~~~~  245 (904)
                      +|.|.|..|..+..+.|.|...  |.+..  ++..+.+  .....+.|.|...+.+.  ..+.|...+.      ...+.
T Consensus        79 ~C~a~n~~g~~~~~~~l~V~~~--P~~~~--~~~~~~~--~~g~~~~l~C~~~g~p~--~~i~W~~~g~~l~~~~~~~~~  150 (389)
T 2jll_A           79 DCEAASRIGGHQKSMYLDIEYA--PKFIS--NQTIYYS--WEGNPINISCDVKSNPP--ASIHWRRDKLVLPAKNTTNLK  150 (389)
T ss_dssp             EEEEECSSCEEEEEEEEEEEEE--EEECC--SCCEEEE--CTTCCEEEEECEEEESC--CEEEEEETTEESSCTTCTTEE
T ss_pred             EEEEEeCCCCcceEEEEEEEeC--CEEec--CcceEEe--ccCCEEEEEEEEEecCC--CeEEEEECCccCCcccCceEE
Confidence            9999999999999999998832  22211  2222122  23344555554432222  2344443321      11233


Q ss_pred             EeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCcee
Q psy8771         246 EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI  325 (904)
Q Consensus       246 ~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~  325 (904)
                      .........+.|.++.+.+.|.|+|.|.|..|.....  ..+.                                     
T Consensus       151 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~--~~l~-------------------------------------  191 (389)
T 2jll_A          151 TYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQE--YILA-------------------------------------  191 (389)
T ss_dssp             EEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEE--EEEE-------------------------------------
T ss_pred             EeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEE--EEEE-------------------------------------
Confidence            3333445679999999999999999999987642100  0000                                     


Q ss_pred             eEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccc
Q psy8771         326 TAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLY  405 (904)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (904)
                                                                                                      
T Consensus       192 --------------------------------------------------------------------------------  191 (389)
T 2jll_A          192 --------------------------------------------------------------------------------  191 (389)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCC
Q psy8771         406 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAP  485 (904)
Q Consensus       406 ~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p  485 (904)
                                                                         +                     ..+|.+|
T Consensus       192 ---------------------------------------------------v---------------------~~~P~~P  199 (389)
T 2jll_A          192 ---------------------------------------------------L---------------------ADVPSSP  199 (389)
T ss_dssp             ---------------------------------------------------E---------------------CCCCCCC
T ss_pred             ---------------------------------------------------e---------------------cCCCCCC
Confidence                                                               0                     0123566


Q ss_pred             CCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEeCCC
Q psy8771         486 RDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFTSVG  563 (904)
Q Consensus       486 ~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~~g  563 (904)
                      .++.+.....+++.|+|.+|...++ ++.+|.|+|+..+.   ..|..... .....+.|.+|.+++.|.|+|+|.|..|
T Consensus       200 ~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~---~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G  276 (389)
T 2jll_A          200 YGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVAS---EIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKG  276 (389)
T ss_dssp             EEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTC---SCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSC
T ss_pred             cceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCC---cccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCc
Confidence            6777778888899999998765544 78899999998764   34544433 3457799999999999999999999999


Q ss_pred             CCCCCCcEEEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771         564 PGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS  642 (904)
Q Consensus       564 ~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~  642 (904)
                      .+.+|....+.+... +|.+| .+.....+.+++.|+|.++.+                                     
T Consensus       277 ~~~~s~~~~~~t~~~~~p~~p-~~~~~~~~~~~v~l~W~~p~~-------------------------------------  318 (389)
T 2jll_A          277 QGDYSKIEIFQTLPVREPSPP-SIHGQPSSGKSFKLSITKQDD-------------------------------------  318 (389)
T ss_dssp             BCCCCCCEEEECCCCCCCCCC-CEEEEEETTTEEEEEECCCCC-------------------------------------
T ss_pred             cCCCCcceEEEecCCCCCCCC-ccccccCcCCEEEEEEECCCC-------------------------------------
Confidence            999998888888765 44444 576667788899999998764                                     


Q ss_pred             CCCCCCCceeeEEEEEEeCCccccc--eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771         643 KPTHSGENIISYELYWNDTYAKAKH--HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ  713 (904)
Q Consensus       643 ~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~  713 (904)
                          .++.+.+|.|+|+..+...+.  .........+.|.+|.|++.|.|+|+|+|..|.|.+|. +.++|.+
T Consensus       319 ----~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~-~~~~T~~  386 (389)
T 2jll_A          319 ----GGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTV-YEFSMPP  386 (389)
T ss_dssp             ----CSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEE-EEEECCC
T ss_pred             ----CCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCcee-eEecCCC
Confidence                566788899998886554442  23345567899999999999999999999999998884 5677754

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=99.97  E-value=3.1e-29  Score=273.44  Aligned_cols=336  Identities=18%  Similarity=0.274  Sum_probs=246.3

Q ss_pred             CCCCCcEEEeccCCceEEEEeCCCCC----------CCc-----------eecccccccccceEEEEeeeccCCeeeeee
Q psy8771          35 TAPRDVQVRPLSSSTMVIQWDEPETP----------NGQ-----------ITHPPTRAARSHARLAAQSVLRRGRLAHAV   93 (904)
Q Consensus        35 ~~p~~l~~~~~~~~s~~v~W~~~~~~----------~g~-----------i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   93 (904)
                      +....|.|...+.+...|.|.+..+.          ++.           ++...+...|.....|...+..+.....+.
T Consensus        15 G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~   94 (389)
T 2jll_A           15 NGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMY   94 (389)
T ss_dssp             TSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred             CCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEE
Confidence            36677778877888899999876210          122           222334444555555555554443444455


Q ss_pred             eeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC--ceee----cceEEEEeee--
Q psy8771          94 RQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD--KLPV----GRNVLTLDRV--  165 (904)
Q Consensus        94 ~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--~~~~----~~~~l~i~~l--  165 (904)
                      +.|     ..+|.|...+.. +.+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+....  ++.+    ....|.|.++  
T Consensus        95 l~V-----~~~P~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~i~W~~~-g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~  167 (389)
T 2jll_A           95 LDI-----EYAPKFISNQTI-YYSWEGNPINISCDVKSNPPASIHWRRD-KLVLPAKNTTNLKTYSTGRKMILEIAPTSD  167 (389)
T ss_dssp             EEE-----EEEEEECCSCCE-EEECTTCCEEEEECEEEESCCEEEEEET-TEESSCTTCTTEEEEECSSCEEEEECCCST
T ss_pred             EEE-----EeCCEEecCcce-EEeccCCEEEEEEEEEecCCCeEEEEEC-CccCCcccCceEEEeccCCEEEEEECCCCh
Confidence            554     467888776654 6889999999999999999999999999 66665432  4443    2457999999  


Q ss_pred             cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC----CccceEEEEEEEeCCCC
Q psy8771         166 TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAAN  241 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~----~~~~~~y~v~~~~~~~~  241 (904)
                      +|+|.|+|.|.|..|.....+.|.+.       ..|.+|.++.+......++.|+|..+    +.++..|.|+|+..+..
T Consensus       168 ~d~G~Y~C~a~N~~G~~~~~~~l~v~-------~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~  240 (389)
T 2jll_A          168 NDFGRYNCTATNHIGTRFQEYILALA-------DVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASE  240 (389)
T ss_dssp             TSSEEEEEEEEETTEEEEEEEEEEEC-------CCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCS
T ss_pred             hhCEEEEEEEEcCCCcEEEEEEEEec-------CCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCc
Confidence            69999999999999998888888887       88999999999999999999999976    34788999999987554


Q ss_pred             CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCC
Q psy8771         242 TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETP  321 (904)
Q Consensus       242 ~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~  321 (904)
                      .............+.|.+|.+++.|.|+|.|.|..|.+.++....+.+.+.                             
T Consensus       241 ~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~-----------------------------  291 (389)
T 2jll_A          241 IWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV-----------------------------  291 (389)
T ss_dssp             CCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC-----------------------------
T ss_pred             ccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC-----------------------------
Confidence            333333334457899999999999999999999999876665544332211                             


Q ss_pred             CceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEE
Q psy8771         322 NGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSL  401 (904)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (904)
                                                                                                      
T Consensus       292 --------------------------------------------------------------------------------  291 (389)
T 2jll_A          292 --------------------------------------------------------------------------------  291 (389)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCC
Q psy8771         402 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEP  481 (904)
Q Consensus       402 ~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p  481 (904)
                                                                                                    .+
T Consensus       292 ------------------------------------------------------------------------------~~  293 (389)
T 2jll_A          292 ------------------------------------------------------------------------------RE  293 (389)
T ss_dssp             ------------------------------------------------------------------------------CC
T ss_pred             ------------------------------------------------------------------------------CC
Confidence                                                                                          12


Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceE--EEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWE--TQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      +.+|. +.+...+.+++.|+|.+|.+.++.+.+|.|+|+..+..   .|.  ........++.+.+|.|++.|.|+|+|.
T Consensus       294 p~~p~-~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~  369 (389)
T 2jll_A          294 PSPPS-IHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKE---DQWLEKKVQGNKDHIILEHLQWTMGYEVQITAA  369 (389)
T ss_dssp             CCCCC-EEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC--------CCBCCEECTTCCEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCCc-cccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCC---cceeEeeccCCcceEEeCCcCCCCEEEEEEEEE
Confidence            34453 55666788999999999887788999999999985532   232  2223566789999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecC
Q psy8771         560 TSVGPGPLSAPVLVKTQ  576 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~  576 (904)
                      |..|.|++|.. .+.|.
T Consensus       370 n~~G~s~~s~~-~~~T~  385 (389)
T 2jll_A          370 NRLGYSEPTVY-EFSMP  385 (389)
T ss_dssp             C-CCBCCCEEE-EEECC
T ss_pred             cCCcCCCceee-EecCC
Confidence            99999988754 56653

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*

Probab=99.97  E-value=2.4e-30  Score=282.35  Aligned_cols=360  Identities=14%  Similarity=0.165  Sum_probs=188.2

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceE--EEEcCCCCCCeEEEEEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQL--TTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~L~p~t~Y~~~V~  557 (904)
                      .+|.++.+...+ ..+.|+|+++.+.++.+. |.|+|+..+.   ..|....   ....+.  ++..+|.+++.|.|+|+
T Consensus         9 ~~P~nv~~~~~~-~~~~L~W~p~~~~~~~i~-Y~V~y~~~~~---~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~   83 (414)
T 3se4_A            9 KSPQKVEVDIID-DNFILRWNRSDESVGNVT-FSFDYQKTGM---DNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR   83 (414)
T ss_dssp             --CCCCCEEEET-TEEEEC----------CE-EEEEEEESSC---CCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEE
T ss_pred             CCCceeEEEEEC-CceEEEEcCCCCCCCCeE-EEEEEEECCC---CCcEECcCccCCCCCEEECCcccccCCCcEEEEEE
Confidence            578999998876 568999999877666777 9999998642   4565431   122333  44457899999999999


Q ss_pred             EEeCCCCCCCCCcEEEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccce
Q psy8771         558 AFTSVGPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETA  636 (904)
Q Consensus       558 a~~~~g~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~  636 (904)
                      |.| .+.+.++....+.+... .+.+| .+.+... .+++.|+|. |...++.+                          
T Consensus        84 A~n-~~~S~~s~~~~~~~~~~~~~~pP-~v~~~~~-~~si~v~w~-P~~~~g~~--------------------------  133 (414)
T 3se4_A           84 AEK-ENTSSWYEVDSFTPFRKAQIGPP-EVHLEAE-DKAIVIHIS-PGTKDSVM--------------------------  133 (414)
T ss_dssp             EEE-TTEEEEEECCCBCHHHHCCCCCC-EEEEEEC-SSCEEEEEE-CSSSSCTT--------------------------
T ss_pred             Eee-CCcCCCEecCceeecccceeCCC-eEEEEEc-CCEEEEEEE-cCCCCCce--------------------------
Confidence            999 55554443333322211 22344 4776664 458999999 64311100                          


Q ss_pred             EEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcC--CCCCCCCCCeeEEecCC
Q psy8771         637 VTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP--RGEGATTPPIPVRTKQY  714 (904)
Q Consensus       637 ~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~--~G~~~~s~~~~~~t~~~  714 (904)
                          |.    .++.+.+|+|.|+..+...... .......+.|.+|.|++.|.|+|+|+|.  .|.|..|..+.+.|...
T Consensus       134 ----~~----~~~~~~~Y~v~y~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~  204 (414)
T 3se4_A          134 ----WA----LDGLSFTYSLVIWKNSSGVEER-IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE  204 (414)
T ss_dssp             ----TG----GGGSSCEEEEEEEETTTCCEEE-EEEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSC
T ss_pred             ----ee----eecCcEEEEEEEEECCCCceEE-EecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccc
Confidence                00    0245789999999887655422 3345678999999999999999999994  68888898888888887


Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEc--------cCCCCccEEEEe-c-CcceEEec-CCC
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVET--------GRSDSEASIVTL-K-NQTSFVLD-ELK  783 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~--------~~~~~~~~~~~~-~-~~~~~~i~-~L~  783 (904)
                      .|..+|.++.+...+ .++.|+|+++.     + ..+|.|+|+..        +...|.. .... . ..+.+.+. +|.
T Consensus       205 ~~~~~P~~v~~~~~~-~~~~l~W~pp~-----~-~~~Y~v~y~~~~~~~~~~~~~~~w~~-~~~~~~~~~~~~~~t~~l~  276 (414)
T 3se4_A          205 NELPPPENIEVSVQN-QNYVLKWDYTY-----A-NMTFQVQWLHAFLKRNPGNHLYKWKQ-IPDCENVKTTQCVFPQNVF  276 (414)
T ss_dssp             CSSCCCEEEEEEEET-TEEEEEEECSS-----S-SCEEEEEEEESGGGSCCCC--CCCCB-CSTTTTBSSSEEEEEGGGS
T ss_pred             cccCCCCccEEEEec-CCeEEEECCCC-----C-CeEEEEEEEehhccccccccccCceE-CCCccCCCCCEEcCCcccc
Confidence            787789999988765 68999999973     1 23999999974        1111210 0000 1 45666675 699


Q ss_pred             CCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC-CC--Cc------cCCcceeeCCCCCc------eeeeeeee----cC
Q psy8771         784 KWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP-SE--VC------PTQNDFRKNKKTNG------SNFKGGYL----ND  844 (904)
Q Consensus       784 p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P-~~--v~------~~~~~W~~p~~~~~------~~~~~~~~----~~  844 (904)
                      +++.|.|+|+|.|..|.|++|....|.|..+.+ ++  +.      .+.+.|.+|...++      ++..|.+.    +.
T Consensus       277 ~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~~~~~~pP~l~~~~~~~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~  356 (414)
T 3se4_A          277 QKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTS  356 (414)
T ss_dssp             CSSEEEEEEEEECSSSEEEECCCEEEETTCC-------------------------------------------------
T ss_pred             cCccEEEEEEEecCCCcccccccccccchhccccCCCeEEEEECCCeEEEEEECCCCccccchhhcCCeEEEEEEEECCC
Confidence            999999999999999999999989998876632 33  21      12239998876553      55555543    11


Q ss_pred             CceEEecCCCeeEEEEcCCCCCcEEEEEEEEEec----CCCCCCCCceEEecCCC
Q psy8771         845 PMRFDVSDGGALELNVTGLQPDTIYTIQVAALTR----KGDGDRSKPETIKTPGG  895 (904)
Q Consensus       845 ~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~----~G~g~~s~~~~~~t~~~  895 (904)
                      ..... .....+.+.|.+|+|++.|.|+|+|.+.    .|.|.+|.++.++|..+
T Consensus       357 ~~~~~-~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~~  410 (414)
T 3se4_A          357 NAERK-IIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPG  410 (414)
T ss_dssp             -------------------------------------------------------
T ss_pred             CceEE-EEecCCeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEeCCC
Confidence            11112 2356678999999999999999999983    58899999988887543

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*

Probab=99.97  E-value=3.7e-30  Score=280.79  Aligned_cols=314  Identities=16%  Similarity=0.153  Sum_probs=161.0

Q ss_pred             eeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCC-------Cceee
Q psy8771         442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN-------GQITG  514 (904)
Q Consensus       442 ~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~-------~~i~~  514 (904)
                      ++..+|.+++.|.|+|+|.| .+.|.++....+......+..+|. +.+.... ++|.|+|. |...+       +.+.+
T Consensus        67 ~t~~~l~~~~~Y~~rV~A~n-~~~S~~s~~~~~~~~~~~~~~pP~-v~~~~~~-~si~v~w~-P~~~~g~~~~~~~~~~~  142 (414)
T 3se4_A           67 FSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEAED-KAIVIHIS-PGTKDSVMWALDGLSFT  142 (414)
T ss_dssp             CCSSCCCTTSCEEEEEEEEE-TTEEEEEECCCBCHHHHCCCCCCE-EEEEECS-SCEEEEEE-CSSSSCTTTGGGGSSCE
T ss_pred             CCcccccCCCcEEEEEEEee-CCcCCCEecCceeecccceeCCCe-EEEEEcC-CEEEEEEE-cCCCCCceeeeecCcEE
Confidence            34457899999999999999 666655444444333334456664 7766554 69999999 65332       45789


Q ss_pred             EEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC--CCCCCCCCcEEEecCCCCC-CCCCCceEEec
Q psy8771         515 YKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS--VGPGPLSAPVLVKTQQGVP-SQPRDLRAVDI  591 (904)
Q Consensus       515 Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~--~g~~~~S~~~~~~t~~~~p-~~p~~~~~~~~  591 (904)
                      |+|.|+..++..  .+.  .......+.|.+|.|++.|.|+|+|.|.  .|.|.+|....+.|....| .+|.++.+...
T Consensus       143 Y~v~y~~~~~~~--~~~--~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~  218 (414)
T 3se4_A          143 YSLVIWKNSSGV--EER--IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ  218 (414)
T ss_dssp             EEEEEEETTTCC--EEE--EEEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEE
T ss_pred             EEEEEEECCCCc--eEE--EecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEe
Confidence            999999876542  122  2345667999999999999999999994  6778889888888876554 57888988776


Q ss_pred             CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeC--------Cc
Q psy8771         592 QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT--------YA  663 (904)
Q Consensus       592 ~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~--------~~  663 (904)
                      + .++.|+|.++..                                             ..+|.|+|+..        +.
T Consensus       219 ~-~~~~l~W~pp~~---------------------------------------------~~~Y~v~y~~~~~~~~~~~~~  252 (414)
T 3se4_A          219 N-QNYVLKWDYTYA---------------------------------------------NMTFQVQWLHAFLKRNPGNHL  252 (414)
T ss_dssp             T-TEEEEEEECSSS---------------------------------------------SCEEEEEEEESGGGSCCCC--
T ss_pred             c-CCeEEEECCCCC---------------------------------------------CeEEEEEEEehhccccccccc
Confidence            4 678999998742                                             34899998863        12


Q ss_pred             cccceEE---ecccceEEEe-CCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecC
Q psy8771         664 KAKHHRR---IGLVETYSLT-GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEP  739 (904)
Q Consensus       664 ~~~~~~~---~~~~~~~~l~-~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~  739 (904)
                      ..+....   ......+.|. +|.+++.|.|+|+|+|..|.|.+|....+.+....+..||. +++.. ..+++.|.|++
T Consensus       253 ~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~~~~~~pP~-l~~~~-~~~si~v~W~~  330 (414)
T 3se4_A          253 YKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPV-FNIRS-LSDSFHIYIGA  330 (414)
T ss_dssp             CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEETTCC-------------------------
T ss_pred             cCceECCCccCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccccccchhccccCCCe-EEEEE-CCCeEEEEEEC
Confidence            2222111   1234567776 69999999999999999999999988999999988777887 88875 46899999999


Q ss_pred             CCCCC----CCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeC----CCCCCCCCcEEeec
Q psy8771         740 PPVER----SNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTS----IGDGPSSYPITIRT  811 (904)
Q Consensus       740 ~~~~~----~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~----~g~g~~s~~~~~~t  811 (904)
                      |....    .++.+.+|+|.|+..+..... .  .....+.++|.+|+|++.|.|+|+|.+.    .|.|++|.++.++|
T Consensus       331 P~~~~~~~~~~~~~~~Y~v~y~~~~~~~~~-~--~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T  407 (414)
T 3se4_A          331 PKQSGNTPVIQDYPLIYEIIFWENTSNAER-K--IIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKT  407 (414)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCccccchhhcCCeEEEEEEEECCCCceE-E--EEecCCeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEe
Confidence            95321    124688999998876543221 1  1126678999999999999999999983    58999999999988


Q ss_pred             CCC
Q psy8771         812 HED  814 (904)
Q Consensus       812 ~~~  814 (904)
                      .++
T Consensus       408 ~~~  410 (414)
T 3se4_A          408 KPG  410 (414)
T ss_dssp             ---
T ss_pred             CCC
Confidence            654

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A

Probab=99.96  E-value=4.6e-29  Score=259.50  Aligned_cols=272  Identities=20%  Similarity=0.270  Sum_probs=206.4

Q ss_pred             CCCCCCeEEEe-----cCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEE
Q psy8771         482 GTAPRDVQVRP-----LSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTI  554 (904)
Q Consensus       482 ~~~p~~l~v~~-----~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~  554 (904)
                      |..|.++....     .+.++|.|+|+++  .+.++.+.+|.|+|......    +.... .  ....+.+|.|++.|.|
T Consensus         4 Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~----~~~~~-~--~~~~~~~l~p~t~Y~~   76 (290)
T 3l5i_A            4 PSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSH----LQNYT-V--NATKLTVNLTNDRYLA   76 (290)
T ss_dssp             CSSCCCEEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSC----CEEEE-E--SSSEEEEEECSSCEEE
T ss_pred             CCCCCceeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcC----ceeEe-c--CCcEEEEEcCCceEEE
Confidence            34555665432     3468999999983  34678999999999987632    11111 1  2235788999999999


Q ss_pred             EEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeec
Q psy8771         555 RVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQ  633 (904)
Q Consensus       555 ~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~  633 (904)
                      +|+|.|..|.|..+.. .+.+.. ..|.++.++.+...+ +++.|+|.++..                            
T Consensus        77 ~V~A~n~~G~s~~s~~-~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~----------------------------  126 (290)
T 3l5i_A           77 TLTVRNLVGKSDAAVL-TIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE----------------------------  126 (290)
T ss_dssp             EEEEEESSCBCCCEEE-EECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS----------------------------
T ss_pred             EEEEEcCCCCCCCceE-EeecccccCCCccceeEEEeCC-CeEEEEEeCCCC----------------------------
Confidence            9999999998765532 222211 244566778777754 699999998842                            


Q ss_pred             cceEEEeccCCCCCCCceeeEEEEEEeCCccc-----cceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCee
Q psy8771         634 ETAVTLAWSKPTHSGENIISYELYWNDTYAKA-----KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIP  708 (904)
Q Consensus       634 ~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-----~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~  708 (904)
                                      .+.+|.|+|+......     +..........+.+.+|.|++.|.|+|+|+|..|.|.. ..+.
T Consensus       127 ----------------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~-~~~~  189 (290)
T 3l5i_A          127 ----------------SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSP-ESIK  189 (290)
T ss_dssp             ----------------CCCEEEEEEEEECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEECCC-EEEE
T ss_pred             ----------------CCCcEEEEEEECCCCCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCccccc-EEEE
Confidence                            5888999888765543     22233334567888999999999999999999998874 4677


Q ss_pred             EEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCce
Q psy8771         709 VRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTE  787 (904)
Q Consensus       709 ~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~  787 (904)
                      +.|...+|..+| ++.+...+.+++.|+|++++.+..+|.+.+|.|+|+..++..   ....+. ..+.++|.+|.+++.
T Consensus       190 ~~t~~~~P~~~p-~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~~~L~p~t~  265 (290)
T 3l5i_A          190 AYLKQAPPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE---TAVNVDSSHTEYTLSSLTSDTL  265 (290)
T ss_dssp             EESSCCCCSSCC-CEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC---EEEEEETTCSEEEECSCCTTCE
T ss_pred             eEccccCCCCCC-eeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe---EEEEeCCCceEEEeCCCCCCCE
Confidence            778888888666 688888899999999997655667899999999999876432   234445 888999999999999


Q ss_pred             EEEEEEEeeCCCCCCCCCcEEeecC
Q psy8771         788 YRIWVLAGTSIGDGPSSYPITIRTH  812 (904)
Q Consensus       788 Y~~~V~a~~~~g~g~~s~~~~~~t~  812 (904)
                      |.|+|+|.|..| |..|..+.|+|+
T Consensus       266 Y~~~V~A~n~~G-g~~s~~~~~~T~  289 (290)
T 3l5i_A          266 YMVRMAAYTDEG-GKDGPEFTFTTP  289 (290)
T ss_dssp             EEEEEEEEETTE-EEECCCEEEECC
T ss_pred             EEEEEEEEeCCC-CCCCCceEeecC
Confidence            999999999999 888999999985

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A

Probab=99.96  E-value=3.8e-28  Score=252.33  Aligned_cols=262  Identities=24%  Similarity=0.383  Sum_probs=206.1

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a  558 (904)
                      .++.+|.+|.+...+.+++.|+|++|   ++.+.+|.|+|+.....  ..|..... .+.+++.+.+|.|++.|.|+|+|
T Consensus        19 ~~p~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a   93 (290)
T 3r8q_A           19 PAIPAPTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKT--GPMKEINLAPDSSSVVVSGLMVATKYEVSVYA   93 (290)
T ss_dssp             -CCCCCEEEEEEEECSSCEEEEEECC---SSCCCEEEEEEEESSSS--SCCEEEEECTTCCEEEECSCCSSCEEEEEEEE
T ss_pred             CCCCCCCceEEEECCCCEEEEEEeCC---CCCeeEEEEEEEeCCCC--CceEEEEcCCCccEEEeCCCCCCCEEEEEEEE
Confidence            55678999999999999999999997   36789999999987633  33444433 56788999999999999999999


Q ss_pred             EeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEE
Q psy8771         559 FTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVT  638 (904)
Q Consensus       559 ~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~  638 (904)
                      .|..|.+..+. ..+.+.. .|.+|.++.+...+.+++.|+|.++.                                  
T Consensus        94 ~~~~g~s~~s~-~~~~t~~-~~~~P~~l~~~~~~~~sv~l~W~~p~----------------------------------  137 (290)
T 3r8q_A           94 LKDTLTSRPAQ-GVVTTLE-NVSPPRRARVTDATETTITISWRTKT----------------------------------  137 (290)
T ss_dssp             EETTEECCCEE-EEEECCC-CCCCCEEEEEEEECSSCEEEEEECCS----------------------------------
T ss_pred             EeCCCCCCCcc-eeEecCC-CCCCCceeEEEEcCCCeEEEEEeCCC----------------------------------
Confidence            99999887663 4455544 34778999999989999999999873                                  


Q ss_pred             EeccCCCCCCCceeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771         639 LAWSKPTHSGENIISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG  717 (904)
Q Consensus       639 l~w~~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~  717 (904)
                                +.+.+|.|+|+..++... .........++.|.+|.|++.|.|+|+|+|..|.|.+. .+.+.|.   |.
T Consensus       138 ----------~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~-~~~~~t~---p~  203 (290)
T 3r8q_A          138 ----------ETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPV-VIDASTA---ID  203 (290)
T ss_dssp             ----------CCCCEEEEEEEESSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCE-EEEEECC---CC
T ss_pred             ----------CcccEEEEEEEECCCCcceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCE-EEEecCC---CC
Confidence                      358889999988765544 23344556799999999999999999999998886543 2334443   33


Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                       +|.+|.+...+.+++.|+|++|.     |.+.+|.|+|+..+...+. ...... ..+.+++.+|.|++.|.|+|+|.+
T Consensus       204 -~P~~l~~~~~~~~sv~l~W~~p~-----~~~~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~  276 (290)
T 3r8q_A          204 -APSNLRFLATTPNSLLVSWQPPR-----ARITGYIIKYEKPGSPPRE-VVPRPRPGVTEATITGLEPGTEYTIYVIALK  276 (290)
T ss_dssp             -CCEEEEEEEEETTEEEEEEECCS-----SCCCEEEEEEECTTSCCEE-CSSCCCTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred             -CCCccEEEeeCCCEEEEEEeCCC-----CcccEEEEEEEeCCCCcce-eEeccCCCccEEEECCCCCCCEEEEEEEEEe
Confidence             57899999889999999999984     4689999999987643321 111222 778999999999999999999999


Q ss_pred             CCCCCCC
Q psy8771         797 SIGDGPS  803 (904)
Q Consensus       797 ~~g~g~~  803 (904)
                      ..|.|.+
T Consensus       277 ~~g~s~p  283 (290)
T 3r8q_A          277 NNQKSEP  283 (290)
T ss_dssp             TTEECCC
T ss_pred             CCCcCCc
Confidence            9988754

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1

Probab=99.96  E-value=1.7e-27  Score=246.60  Aligned_cols=260  Identities=19%  Similarity=0.283  Sum_probs=203.7

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE-eecCceEEEEcCCCCCCeEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ-VVDNNQLTTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~p~t~Y~~~V~a  558 (904)
                      .++.+|.++.+...+.+++.|+|+++.   +.+.+|.|+|+.....  ..|... ......++.+.+|.|++.|.|+|+|
T Consensus        13 ~~p~~P~~l~~~~~~~~sv~l~W~~~~---~~~~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a   87 (283)
T 1tdq_A           13 PVIDGPTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGE--GGKTTFRLQPPLSQYSVQALRPGSRYEVSISA   87 (283)
T ss_dssp             CSSCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSS--CCCEEEEECTTCSEEEECSCCTTCEEEEEEEE
T ss_pred             cCCCCCcEEEEEecCCCeEEEEEECCC---CceeEEEEEEEEecCC--CCcEEEEeCCCCCEEEecCCCCCCEEEEEEEE
Confidence            356789999999999999999999976   6789999999865432  223332 2366788999999999999999999


Q ss_pred             EeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEE
Q psy8771         559 FTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVT  638 (904)
Q Consensus       559 ~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~  638 (904)
                      .|..|.+.. ....+.+   .|.+|.++++...+.+++.|+|.++.                                  
T Consensus        88 ~~~~g~s~~-~~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~----------------------------------  129 (283)
T 1tdq_A           88 VRGTNESDA-SSTQFTT---EIDAPKNLRVGSRTATSLDLEWDNSE----------------------------------  129 (283)
T ss_dssp             EETTEECCC-EEEEEEC---CCCCCEEEEEEEECSSCEEEEEECCS----------------------------------
T ss_pred             ECCCCCCCC-eeEEEEC---CCCCCCceEEEecCCCeEEEEecCCC----------------------------------
Confidence            998877642 2234444   56778999999989999999999873                                  


Q ss_pred             EeccCCCCCCCceeeEEEEEEeCCccccceE-Eecc---cceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCC
Q psy8771         639 LAWSKPTHSGENIISYELYWNDTYAKAKHHR-RIGL---VETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY  714 (904)
Q Consensus       639 l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~---~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~  714 (904)
                                +.+.+|.|+|+..++...... ....   ...+.|.+|.|++.|.|+|+|+|..|.|.+   ..+.+...
T Consensus       130 ----------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~---~~~~~~t~  196 (283)
T 1tdq_A          130 ----------AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIP---ATMNARTE  196 (283)
T ss_dssp             ----------SCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCC---EEEEEECC
T ss_pred             ----------CCccEEEEEEEeCCCCcceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcc---eEEEecCC
Confidence                      358899999988766554233 3333   678999999999999999999999887643   33333332


Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVL  793 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~  793 (904)
                       |. +|.++.+...+.+++.|+|+++     +|.+.+|.|+|+..++..   ....+. ..+.+.|.+|.|++.|.|+|+
T Consensus       197 -~~-~P~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~i~~L~p~t~Y~~~V~  266 (283)
T 1tdq_A          197 -LD-SPRDLMVTASSETSISLIWTKA-----SGPIDHYRITFTPSSGIS---SEVTVPRDRTSYTLTDLEPGAEYIISIT  266 (283)
T ss_dssp             -CC-CCEEEEEEEECSSCEEEEEECC-----CSCCSEEEEEEECSSSCC---EEEEEESSCSEEEECCCCTTCCEEEEEE
T ss_pred             -CC-CCCccEEeEecCCEEEEEEeCC-----CCcccEEEEEEEcCCCCe---eEEEeCCCccEEEECCCCCCCEEEEEEE
Confidence             32 5788999999999999999987     367899999999876432   334445 889999999999999999999


Q ss_pred             EeeCCCCCCCCC
Q psy8771         794 AGTSIGDGPSSY  805 (904)
Q Consensus       794 a~~~~g~g~~s~  805 (904)
                      |.+..|.|..+.
T Consensus       267 A~~~~g~s~~~~  278 (283)
T 1tdq_A          267 AERGRQQSLEST  278 (283)
T ss_dssp             EEETTEECCCEE
T ss_pred             EEcCCCCCccee
Confidence            999988877654

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=99.96  E-value=2.7e-29  Score=299.07  Aligned_cols=329  Identities=19%  Similarity=0.227  Sum_probs=198.8

Q ss_pred             CCceeeeeccCCeEEEEEEEE-eeCCCC----CCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCcee
Q psy8771         439 TPGFGEQALYPNTLYYIWLAA-QSPRGE----GATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT  513 (904)
Q Consensus       439 ~~~~~~~~L~p~~~Y~~~v~a-~~~~g~----~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~  513 (904)
                      ...+.+.+|.|++.|.|+|+| .|..|.    +..|....++|....| .+|.++.+...+.++|.|+|++|...+|.+.
T Consensus       548 ~~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~P-s~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~  626 (897)
T 2dtg_E          548 HPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNP-SVPLDPISVSNSSSQIILKWKPPSDPNGNIT  626 (897)
T ss_dssp             CCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCC-CCCEEEEEEECSSSCEEEEEECCCCSSSSCS
T ss_pred             ccceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCC-cCCcceEEEeCCCCEEEEEEeCCCCCCCCee
Confidence            466889999999999999999 898887    6788888888887666 6999999999999999999999988889999


Q ss_pred             eEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCC
Q psy8771         514 GYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQE  593 (904)
Q Consensus       514 ~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~  593 (904)
                      +|.|+|+.......  +.     ........+|.|++.|.|+|.|.+..+.+..+......+....|..|..+. ...+.
T Consensus       627 ~Y~V~~~~~~~~~~--~~-----~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~-~~~~~  698 (897)
T 2dtg_E          627 HYLVFWERQAEDSE--LF-----ELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQIL-KELEE  698 (897)
T ss_dssp             EEECCEEEECCCCS--CT-----TCSSSCSCCCCCC--------------------------------------------
T ss_pred             EEEEEEEECCCCcc--ce-----ecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchh-hhhhh
Confidence            99999987654311  10     112223456899999999999999876543332222222222344444444 44567


Q ss_pred             CeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeC---CccccceEE
Q psy8771         594 TAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT---YAKAKHHRR  670 (904)
Q Consensus       594 ~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~---~~~~~~~~~  670 (904)
                      +++.++|+.+....  +..++         |                         ....|.+.-...   .........
T Consensus       699 ~s~~~~W~~~~~n~--v~~~~---------p-------------------------~~~r~~l~~~~n~t~~~~~~~~~~  742 (897)
T 2dtg_E          699 SSFRKTFEDYLHNV--VFVPR---------P-------------------------SRKRRSLGDVGNAGNNEEHRPFEK  742 (897)
T ss_dssp             -------------------------------------------------------------------------CCSCSCE
T ss_pred             hheeeeEEEccCce--EEccC---------C-------------------------CcccccccccccccCccccceEEe
Confidence            78899998764200  00000         0                         000000000000   000111122


Q ss_pred             ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCC---CCCeeEEecCC-CCCCCCCCcEEEecCCCEEEEEecCCCCCCCC
Q psy8771         671 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGAT---TPPIPVRTKQY-VPGAPPQNVSCEPLSSTSIRISWEPPPVERSN  746 (904)
Q Consensus       671 ~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~---s~~~~~~t~~~-~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~  746 (904)
                      ....++++|.+|+|++.|.|+|+|+|..|.+.+   +..+.++|.+. .++.+|.++.+...+.++|.|+|++|  ...+
T Consensus       743 ~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~~~~p~~P~~l~~~~~~~~sv~LsW~~P--~~~n  820 (897)
T 2dtg_E          743 VVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEP--KEPN  820 (897)
T ss_dssp             ECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCCCCCCCCCCCCCCCSSSSSCCCCCCCCC--CSCS
T ss_pred             cCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCccCCCCCCcceEEEeCCCCEEEEEECCC--CCCC
Confidence            334579999999999999999999999998764   55677888762 23346888999888999999999999  4678


Q ss_pred             ccEEEEEEEEEEccCCCCccEEEEe--c-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771         747 GHIVYYKLQFVETGRSDSEASIVTL--K-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       747 g~~~~Y~v~~~~~~~~~~~~~~~~~--~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P  816 (904)
                      |.+.+|.|+|+..+.. +.......  . ..+.++|.+|.|+ .|.|+|+|.+..|.|++|+++.++|.+.++
T Consensus       821 G~I~~Y~V~y~~~~~~-~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p~  891 (897)
T 2dtg_E          821 GLIVLYEVSYRRYGDE-ELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYLD  891 (897)
T ss_dssp             SCEEEECCCCBSSSBC-CCCCCCCSSSCCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC-
T ss_pred             CCEEEEEEEEEECCCc-ceEEEEeeeeecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCCC
Confidence            9999999999876642 11111111  2 6778999999999 699999999999999999999999987654

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=99.96  E-value=2.6e-29  Score=299.17  Aligned_cols=363  Identities=18%  Similarity=0.231  Sum_probs=215.7

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCC-CceeeEEEEEEeCCCC-----------CCcceEEEeec-----------Cce
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPN-GQITGYKVYYTQDQSL-----------PMSAWETQVVD-----------NNQ  539 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~-~~i~~Y~v~~~~~~~~-----------~~~~~~~~~~~-----------~~~  539 (904)
                      ..|.++.+..++++++.|+|++|...+ +.+.+|.|+|+.....           ....|......           ..+
T Consensus       470 ~~~~~l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~  549 (897)
T 2dtg_E          470 NELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP  549 (897)
T ss_dssp             CCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred             cceeEEEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCcccccccccccc
Confidence            356788999999999999999987544 5899999999875210           11345443221           257


Q ss_pred             EEEEcCCCCCCeEEEEEEE-EeCCCC----CCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEE
Q psy8771         540 LTTISDLTPHTIYTIRVQA-FTSVGP----GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYE  614 (904)
Q Consensus       540 ~~~~~~L~p~t~Y~~~V~a-~~~~g~----~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~  614 (904)
                      .+.+.+|.|++.|.|+|+| +|..|.    |.+|..+.++|...+|.+|.++.+...+.+++.|+|.+|..         
T Consensus       550 ~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~---------  620 (897)
T 2dtg_E          550 GWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSD---------  620 (897)
T ss_dssp             EEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCC---------
T ss_pred             ceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCC---------
Confidence            7999999999999999999 898887    78898899999999999999999999999999999999976         


Q ss_pred             EEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEE
Q psy8771         615 LYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAA  694 (904)
Q Consensus       615 v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a  694 (904)
                                                      .++.+.+|.|+|+.........    ........+|.|++.|.|+|.|
T Consensus       621 --------------------------------~nG~I~~Y~V~~~~~~~~~~~~----~~~~~~~~~l~p~t~Y~~~V~A  664 (897)
T 2dtg_E          621 --------------------------------PNGNITHYLVFWERQAEDSELF----ELDYCLKGLKLPSRTWSPPFES  664 (897)
T ss_dssp             --------------------------------SSSSCSEEECCEEEECCCCSCT----TCSSSCSCCCCCC---------
T ss_pred             --------------------------------CCCCeeEEEEEEEECCCCccce----ecccccCCCcCCccccceeeec
Confidence                                            4566778888777654432211    1112223558999999999999


Q ss_pred             EcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEE-------EEEEEEc---cCCCC
Q psy8771         695 QSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYY-------KLQFVET---GRSDS  764 (904)
Q Consensus       695 ~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y-------~v~~~~~---~~~~~  764 (904)
                      .+..+.+..+......+....|..+ ..+. ...+.+++.++|+.+..   +. +..+       .+.-...   .....
T Consensus       665 ~~~~~~s~~~~~~~~~~~~~~p~~p-~~~~-~~~~~~s~~~~W~~~~~---n~-v~~~~p~~~r~~l~~~~n~t~~~~~~  738 (897)
T 2dtg_E          665 EDSQKHNQSEYEDSAGECCSCPKTD-SQIL-KELEESSFRKTFEDYLH---NV-VFVPRPSRKRRSLGDVGNAGNNEEHR  738 (897)
T ss_dssp             -----------------------------------------------------------------------------CCS
T ss_pred             ccccCcccccccccCCCccCCcCcc-cchh-hhhhhhheeeeEEEccC---ce-EEccCCCcccccccccccccCccccc
Confidence            9987655443222222222334433 3343 45578899999998732   11 1111       1100000   00001


Q ss_pred             ccEEEEecCcceEEecCCCCCceEEEEEEEeeCCCCCCC---CCcEEeecCC-----CCCCCCcc-------CCcceeeC
Q psy8771         765 EASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPS---SYPITIRTHE-----DDPSEVCP-------TQNDFRKN  829 (904)
Q Consensus       765 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~---s~~~~~~t~~-----~~P~~v~~-------~~~~W~~p  829 (904)
                        ........+.++|.+|.|++.|.|+|+|.|..|.+..   +..+.++|.+     .+|..+..       +.++|++|
T Consensus       739 --~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~~~~p~~P~~l~~~~~~~~sv~LsW~~P  816 (897)
T 2dtg_E          739 --PFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEP  816 (897)
T ss_dssp             --CSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCCCCCCCCCCCCCCCSSSSSCCCCCCCCC
T ss_pred             --eEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCccCCCCCCcceEEEeCCCCEEEEEECCC
Confidence              1111225689999999999999999999999998764   5667888875     23333222       23399999


Q ss_pred             CCCCceeeeeeeecCCc---e-EEec----CCCeeEEEEcCCCCCcEEEEEEEEEecCCCCCCCCceEEecCCCCCCC
Q psy8771         830 KKTNGSNFKGGYLNDPM---R-FDVS----DGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNR  899 (904)
Q Consensus       830 ~~~~~~~~~~~~~~~~~---~-~~~~----~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~t~~~~p~~  899 (904)
                      ...+|.|..|.+.....   . ....    ....+.+.+.+|.|| +|.|+|+|.|.+|.|++|.++.+.|...++.+
T Consensus       817 ~~~nG~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p~~p  893 (897)
T 2dtg_E          817 KEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYLDVP  893 (897)
T ss_dssp             CSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC---
T ss_pred             CCCCCCEEEEEEEEEECCCcceEEEEeeeeecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCCCCC
Confidence            88899887766532211   1 1111    346678999999999 69999999999999999999999998754443

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1

Probab=99.95  E-value=3.6e-25  Score=229.14  Aligned_cols=260  Identities=22%  Similarity=0.360  Sum_probs=197.7

Q ss_pred             CCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE-eecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE-ISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       199 ~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      ++|.+|.++++...+.+++.|+|+++.+.+.+|.|+|+.......+.. ........+.|.+|.|++.|.|+|+|.|..|
T Consensus        13 ~~p~~P~~l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g   92 (283)
T 1tdq_A           13 PVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTN   92 (283)
T ss_dssp             CSSCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             cCCCCCcEEEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEEEEEEECCCC
Confidence            788999999999999999999999998789999999976543333322 2344567888899999999999999888655


Q ss_pred             CCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEE
Q psy8771         278 RGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQ  357 (904)
Q Consensus       278 ~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~  357 (904)
                      .+.+   ...                                                                      
T Consensus        93 ~s~~---~~~----------------------------------------------------------------------   99 (283)
T 1tdq_A           93 ESDA---SST----------------------------------------------------------------------   99 (283)
T ss_dssp             ECCC---EEE----------------------------------------------------------------------
T ss_pred             CCCC---eeE----------------------------------------------------------------------
Confidence            4311   000                                                                      


Q ss_pred             cCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccC
Q psy8771         358 SPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYG  437 (904)
Q Consensus       358 ~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  437 (904)
                                                                                                      
T Consensus       100 --------------------------------------------------------------------------------   99 (283)
T 1tdq_A          100 --------------------------------------------------------------------------------   99 (283)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEE
Q psy8771         438 KTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKV  517 (904)
Q Consensus       438 ~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v  517 (904)
                                                         .+.    .++.+|.++.+...+.+++.|+|++|.   +.+.+|.|
T Consensus       100 -----------------------------------~~~----t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v  137 (283)
T 1tdq_A          100 -----------------------------------QFT----TEIDAPKNLRVGSRTATSLDLEWDNSE---AEAQEYKV  137 (283)
T ss_dssp             -----------------------------------EEE----CCCCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEE
T ss_pred             -----------------------------------EEE----CCCCCCCceEEEecCCCeEEEEecCCC---CCccEEEE
Confidence                                               000    124567889998889999999999975   57899999


Q ss_pred             EEEeCCCCCCcceEEE-eecC---ceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCC
Q psy8771         518 YYTQDQSLPMSAWETQ-VVDN---NQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQE  593 (904)
Q Consensus       518 ~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~  593 (904)
                      +|+..++.   .+... ....   ...+.+.+|.|++.|.|+|+|.|..|.+.   ...+.+.. .|.+|.++.+...+.
T Consensus       138 ~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~---~~~~~~~t-~~~~P~~l~~~~~~~  210 (283)
T 1tdq_A          138 VYSTLAGE---QYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSI---PATMNART-ELDSPRDLMVTASSE  210 (283)
T ss_dssp             EEEETTCC---CCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECC---CEEEEEEC-CCCCCEEEEEEEECS
T ss_pred             EEEeCCCC---cceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCc---ceEEEecC-CCCCCCccEEeEecC
Confidence            99987643   23222 3344   78899999999999999999999887653   33333333 445788899988888


Q ss_pred             CeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecc
Q psy8771         594 TAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGL  673 (904)
Q Consensus       594 ~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~  673 (904)
                      +++.|+|.++.                                            +.+.+|.|+|+..++..........
T Consensus       211 ~sv~l~W~~p~--------------------------------------------~~i~~Y~v~~~~~~~~~~~~~~~~~  246 (283)
T 1tdq_A          211 TSISLIWTKAS--------------------------------------------GPIDHYRITFTPSSGISSEVTVPRD  246 (283)
T ss_dssp             SCEEEEEECCC--------------------------------------------SCCSEEEEEEECSSSCCEEEEEESS
T ss_pred             CEEEEEEeCCC--------------------------------------------CcccEEEEEEEcCCCCeeEEEeCCC
Confidence            99999998863                                            4578888888877654433444556


Q ss_pred             cceEEEeCCCCCcEEEEEEEEEcCCCCCCCC
Q psy8771         674 VETYSLTGLYPNTLYYIWLAAQSPRGEGATT  704 (904)
Q Consensus       674 ~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s  704 (904)
                      ...+.|.+|.|++.|.|+|+|++..|.|.++
T Consensus       247 ~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~  277 (283)
T 1tdq_A          247 RTSYTLTDLEPGAEYIISITAERGRQQSLES  277 (283)
T ss_dssp             CSEEEECCCCTTCCEEEEEEEEETTEECCCE
T ss_pred             ccEEEECCCCCCCEEEEEEEEEcCCCCCcce
Confidence            6899999999999999999999999887665

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A

Probab=99.95  E-value=9.3e-26  Score=235.58  Aligned_cols=266  Identities=17%  Similarity=0.266  Sum_probs=196.7

Q ss_pred             CCCCceEEecCCCeEEEEEEcc-------CCCCeEEEeeCCccccCCCCceee-c--ceEEEEeeec-CCeEEEEEEEec
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVG-------SPMPFVKWRKGQNIELTPDDKLPV-G--RNVLTLDRVT-ESENYTCIAASV  178 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g-------~p~p~i~W~k~~~~~~~~~~~~~~-~--~~~l~i~~l~-d~g~Y~c~a~n~  178 (904)
                      .|.+ ..+..|++++|.|.+.|       .|.|.|.|+|+ |..+... ++.+ +  ...|.|.++. ..|.|+|.|.|.
T Consensus        10 ~P~~-~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~-g~~i~~~-~~~~~~~~~~~L~i~~~~~~~g~Y~C~a~~~   86 (303)
T 1i1r_A           10 SPES-PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTN-HFTIPKE-QYTIINRTASSVTFTDIASLNIQLTCNILTF   86 (303)
T ss_dssp             ESSS-CEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEET-TEECCGG-GCEEEETTEEEEEECSCCCSEEEEEEEEEET
T ss_pred             ccCC-ceEeCCCCEEEEEEECCccccccCCChhheEEEEC-CEECChh-heeeeCCcEEEEEEcCcCCCceEEEEecccC
Confidence            4556 88999999999999996       48899999999 7777543 3332 2  3579999993 369999999884


Q ss_pred             Ccce---EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCeEEeecceec
Q psy8771         179 LGVI---ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPYSEISGIITT  253 (904)
Q Consensus       179 ~g~~---~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~  253 (904)
                       |..   ...+.|.+.       .+|.+|.++++...+.++++|+|.++  .+...+|.|+++..+..............
T Consensus        87 -g~~~~~~~~~~l~v~-------~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~  158 (303)
T 1i1r_A           87 -GQLEQNVYGITIISG-------LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPT  158 (303)
T ss_dssp             -TTEEEEEEEEEEEEE-------CCCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEECCSSCTT
T ss_pred             -CCcceEEEEEEEecc-------CCCCCCeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCccCCCcCCCce
Confidence             432   234556666       88999999999988889999999988  33457999999865322111112234457


Q ss_pred             eEEEcCC-CCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEe
Q psy8771         254 YYTVRNL-SPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRR  332 (904)
Q Consensus       254 ~~~i~~L-~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~  332 (904)
                      .+.|.+| .+++.|.|+|.|.|..|.+.++ ...+..                                           
T Consensus       159 ~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~-~~~~~~-------------------------------------------  194 (303)
T 1i1r_A          159 SCTVDYSTVYFVNIEVWVEAENALGKVTSD-HINFDP-------------------------------------------  194 (303)
T ss_dssp             EEECSSCCCTTSCEEEEEEEEETTEEEECC-CEEECG-------------------------------------------
T ss_pred             EEEECCcCcccccEEEEEEEEcCCCCcccC-CEEECH-------------------------------------------
Confidence            8999999 8999999999999998865311 111100                                           


Q ss_pred             eceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEE
Q psy8771         333 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYI  412 (904)
Q Consensus       333 ~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~  412 (904)
                                                                                                      
T Consensus       195 --------------------------------------------------------------------------------  194 (303)
T 1i1r_A          195 --------------------------------------------------------------------------------  194 (303)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEe
Q psy8771         413 WLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRP  492 (904)
Q Consensus       413 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~  492 (904)
                                                                                      ....++.+|.++.+..
T Consensus       195 ----------------------------------------------------------------~~~~~p~pP~~~~v~~  210 (303)
T 1i1r_A          195 ----------------------------------------------------------------VYKVKPNPPHNLSVIN  210 (303)
T ss_dssp             ----------------------------------------------------------------GGGEECCCCEEEEEEC
T ss_pred             ----------------------------------------------------------------HHeEecCCCcceEEEE
Confidence                                                                            0002346777787765


Q ss_pred             c--CCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe----ecCceEEEEcCCCCCCeEEEEEEEEeCCCCCC
Q psy8771         493 L--SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV----VDNNQLTTISDLTPHTIYTIRVQAFTSVGPGP  566 (904)
Q Consensus       493 ~--~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~  566 (904)
                      .  +.+++.|+|++|...++.+.+|.|+|+..+.   ..|....    ....+.+.|.+|.|++.|.|+|+|.|..|.|.
T Consensus       211 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~---~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~  287 (303)
T 1i1r_A          211 SEELSSILKLTWTNPSIKSVIILKYNIQYRTKDA---STWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGY  287 (303)
T ss_dssp             CSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTC---SSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSC
T ss_pred             ecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCC---CCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCC
Confidence            4  6789999999988777789999999998763   4576553    34567899999999999999999999999876


Q ss_pred             CC---CcEEEecCC
Q psy8771         567 LS---APVLVKTQQ  577 (904)
Q Consensus       567 ~S---~~~~~~t~~  577 (904)
                      +|   ..+.++|.+
T Consensus       288 ~S~wS~~~~~~T~e  301 (303)
T 1i1r_A          288 WSDWSEEASGITYE  301 (303)
T ss_dssp             CCCCCCCEEEECCC
T ss_pred             cCCCCCccceeCCc
Confidence            55   566677654

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A

Probab=99.94  E-value=1.2e-25  Score=233.50  Aligned_cols=250  Identities=21%  Similarity=0.284  Sum_probs=194.5

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc-cceE-EecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA-KHHR-RIGLVETYSLTGLYPNTLYYIWLAAQSP  697 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~~~~-~~~~~~~~~l~~L~p~t~Y~v~V~a~~~  697 (904)
                      .+++|.+|.+...+.+++.|+|.++   ++.+.+|.|+|+..+... +... ......++.|.+|.|++.|.|+|+|+|.
T Consensus        20 ~p~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   96 (290)
T 3r8q_A           20 AIPAPTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKD   96 (290)
T ss_dssp             CCCCCEEEEEEEECSSCEEEEEECC---SSCCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred             CCCCCCceEEEECCCCEEEEEEeCC---CCCeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEEEeC
Confidence            5789999999999999999999996   468999999999876433 3222 3345679999999999999999999999


Q ss_pred             CCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-Ccce
Q psy8771         698 RGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTS  776 (904)
Q Consensus       698 ~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~  776 (904)
                      .|.|.++ ...+.|...+  .+|.++.+...+.+++.|+|+++     ++.+.+|.|+|+..++...  ...... ..+.
T Consensus        97 ~g~s~~s-~~~~~t~~~~--~~P~~l~~~~~~~~sv~l~W~~p-----~~~~~~Y~v~~~~~~~~~~--~~~~~~~~~~~  166 (290)
T 3r8q_A           97 TLTSRPA-QGVVTTLENV--SPPRRARVTDATETTITISWRTK-----TETITGFQVDAVPANGQTP--IQRTIKPDVRS  166 (290)
T ss_dssp             TEECCCE-EEEEECCCCC--CCCEEEEEEEECSSCEEEEEECC-----SCCCCEEEEEEEESSSCCC--EEEEECTTCSE
T ss_pred             CCCCCCc-ceeEecCCCC--CCCceeEEEEcCCCeEEEEEeCC-----CCcccEEEEEEEECCCCcc--eEEecCCCccE
Confidence            9988776 4556665543  36899999999999999999987     3568999999998765432  233344 7889


Q ss_pred             EEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCCCCccC-------CcceeeCCC-CCceeeeeeeecCCceE
Q psy8771         777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPT-------QNDFRKNKK-TNGSNFKGGYLNDPMRF  848 (904)
Q Consensus       777 ~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~~v~~~-------~~~W~~p~~-~~~~~~~~~~~~~~~~~  848 (904)
                      +.|.+|.|++.|.|+|+|.|..|.|... .+.+.|.+.+|..+...       .++|.+|.. ..+|.+.+...+.....
T Consensus       167 ~~i~~L~p~t~Y~~~V~A~n~~g~s~~~-~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~  245 (290)
T 3r8q_A          167 YTITGLQPGTDYKIYLYTLNDNARSSPV-VIDASTAIDAPSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPRE  245 (290)
T ss_dssp             EEECSCCTTCEEEEEEEEEETTEECCCE-EEEEECCCCCCEEEEEEEEETTEEEEEEECCSSCCCEEEEEEECTTSCCEE
T ss_pred             EEECCCCCCCEEEEEEEEEeCCcccCCE-EEEecCCCCCCCccEEEeeCCCEEEEEEeCCCCcccEEEEEEEeCCCCcce
Confidence            9999999999999999999998887654 35567777766553322       239998753 45565555544443332


Q ss_pred             E--ecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCCC
Q psy8771         849 D--VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGD  883 (904)
Q Consensus       849 ~--~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~  883 (904)
                      .  ......+++.+.+|.||+.|.|+|+|+|..|.|.
T Consensus       246 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~  282 (290)
T 3r8q_A          246 VVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSE  282 (290)
T ss_dssp             CSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred             eEeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCC
Confidence            2  2346788999999999999999999999988773

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A

Probab=99.94  E-value=1.5e-25  Score=232.84  Aligned_cols=225  Identities=16%  Similarity=0.300  Sum_probs=176.5

Q ss_pred             eeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEe
Q psy8771         442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQ  521 (904)
Q Consensus       442 ~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~  521 (904)
                      ..+.+|.|++.|.|+|.|.|..|.+..+. ..+.+....++.+|.++.+.... +++.|+|++|..   .+.+|.|+|+.
T Consensus        63 ~~~~~l~p~t~Y~~~V~A~n~~G~s~~s~-~~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~---~i~~Y~v~~~~  137 (290)
T 3l5i_A           63 TKLTVNLTNDRYLATLTVRNLVGKSDAAV-LTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE---SVKKYILEWCV  137 (290)
T ss_dssp             SEEEEEECSSCEEEEEEEEESSCBCCCEE-EEECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS---CCCEEEEEEEE
T ss_pred             cEEEEEcCCceEEEEEEEEcCCCCCCCce-EEeecccccCCCccceeEEEeCC-CeEEEEEeCCCC---CCCcEEEEEEE
Confidence            35788999999999999999999886552 22222222456677788877765 699999999764   68999999998


Q ss_pred             CCCCCC--cceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEE
Q psy8771         522 DQSLPM--SAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLA  599 (904)
Q Consensus       522 ~~~~~~--~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~  599 (904)
                      ......  ..|..........+.+.+|.|++.|.|+|+|+|..|.|. +....+.+....|..|..+.+...+.+++.|+
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~-~~~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~  216 (290)
T 3l5i_A          138 LSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGS-PESIKAYLKQAPPSKGPTVRTKKVGKNEAVLE  216 (290)
T ss_dssp             ECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEECC-CEEEEEESSCCCCSSCCCEEEEEECSSCEEEE
T ss_pred             CCCCCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCcccc-cEEEEeEccccCCCCCCeeeEeeccCCEEEEE
Confidence            764322  346665556677788999999999999999999999886 45566678888887777888888899999999


Q ss_pred             EeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEE
Q psy8771         600 WSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSL  679 (904)
Q Consensus       600 W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l  679 (904)
                      |.++..                                       ...++.+.+|.|+|+..++............+++|
T Consensus       217 W~~~~~---------------------------------------~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~  257 (290)
T 3l5i_A          217 WDQLPV---------------------------------------DVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTL  257 (290)
T ss_dssp             ECCCCH---------------------------------------HHHSSCCCEEEEEEEETTSCCEEEEEETTCSEEEE
T ss_pred             EcCCCh---------------------------------------hccCCEEEEEEEEEEeCCCCeEEEEeCCCceEEEe
Confidence            995421                                       11466789999999887655444444566789999


Q ss_pred             eCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEec
Q psy8771         680 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK  712 (904)
Q Consensus       680 ~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~  712 (904)
                      .+|.|++.|.|+|+|+|..| |..|..+.++|.
T Consensus       258 ~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~  289 (290)
T 3l5i_A          258 SSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTP  289 (290)
T ss_dssp             CSCCTTCEEEEEEEEEETTE-EEECCCEEEECC
T ss_pred             CCCCCCCEEEEEEEEEeCCC-CCCCCceEeecC
Confidence            99999999999999999999 888888988885

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=99.93  E-value=4.6e-24  Score=223.70  Aligned_cols=270  Identities=15%  Similarity=0.191  Sum_probs=188.2

Q ss_pred             CCceEEecCCCeEEEEEEccC-----CCCeEEEeeCCccccCCCCcee-ecc---eEEEEeee--cCCeEEEEEEEecCc
Q psy8771         112 PALLEVMLDSPLNLSCVAVGS-----PMPFVKWRKGQNIELTPDDKLP-VGR---NVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       112 ~~~~~~~~g~~~~l~C~~~g~-----p~p~i~W~k~~~~~~~~~~~~~-~~~---~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      .+ ..+..|++++|.|.+.|+     |.+.|.|+++ +..+..+.... .++   +.|.|.++  +|+|.|.|.+.+..+
T Consensus         8 ~~-~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~-g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~   85 (313)
T 2d9q_B            8 SA-PIVHLGDPITASCIIKQNCSHLDPEPQILWRLG-AELQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSL   85 (313)
T ss_dssp             SC-SEECTTCCEEEEECCCTTSCSSCSCSCCEEESS-SCBCTTCEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSE
T ss_pred             CC-cEEcCCCCEEEEEEECCCCCCCCcccceEEEeC-CEECCccceEEEecCeEEEEEEEeccCCCccceEEeeecCCCc
Confidence            44 788999999999999998     6789999999 66665432221 222   67999999  588999999977666


Q ss_pred             ceEEEEEEEEEeecCCCCCCCCCCcceEEEeec-CCeEEEEEeCC--CccceEEEEEEEeCCCC-----CCeEEee-cce
Q psy8771         181 VIETSTIVKVQCKYAPLLTLPVAPLDVKISEVT-ATSVRLDWTYP--SETLLYYVIQYKPKAAN-----TPYSEIS-GII  251 (904)
Q Consensus       181 ~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~-~~sv~l~W~~~--~~~~~~y~v~~~~~~~~-----~~~~~~~-~~~  251 (904)
                      ...+.+.|.+.       .+|.+|.++.+...+ .++++|+|+++  ......|.|+++..+..     ..+.... ...
T Consensus        86 ~~~~~~~l~v~-------~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~  158 (313)
T 2d9q_B           86 QILDQVELRAG-------YPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDG  158 (313)
T ss_dssp             EEEEEEEEEEC-------CCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSCCCCEEEECCCTT
T ss_pred             eeEEEEEEccC-------CCCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccCCcccccCCCCCC
Confidence            66667778877       789999999988874 68999999988  23356799999865422     1222221 111


Q ss_pred             eceEEE--cCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEE
Q psy8771         252 TTYYTV--RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKH  329 (904)
Q Consensus       252 ~~~~~i--~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~  329 (904)
                      ...+.+  .+|.+++.|.|+|.|.|..|.+. +....+.+                                        
T Consensus       159 ~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~-s~~~~~~~----------------------------------------  197 (313)
T 2d9q_B          159 QSHCSIPRKHLLLYQNMGIWVQAENALGTSM-SPQLCLDP----------------------------------------  197 (313)
T ss_dssp             CSEEEEEGGGCCSSSCEEEEEEEEETTEEEE-CCCEEECG----------------------------------------
T ss_pred             CcEEEECccccccceeEEEEEEEECCCCCcc-CccEEEeh----------------------------------------
Confidence            234444  45888888888888888877532 11111111                                        


Q ss_pred             EEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcE
Q psy8771         330 HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTL  409 (904)
Q Consensus       330 ~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (904)
                                                                                                      
T Consensus       198 --------------------------------------------------------------------------------  197 (313)
T 2d9q_B          198 --------------------------------------------------------------------------------  197 (313)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeE
Q psy8771         410 YYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQ  489 (904)
Q Consensus       410 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~  489 (904)
                                                                                         ....++.+|.++.
T Consensus       198 -------------------------------------------------------------------~~~~~p~pP~~~~  210 (313)
T 2d9q_B          198 -------------------------------------------------------------------MDVVKLEPPMLRT  210 (313)
T ss_dssp             -------------------------------------------------------------------GGGEECCCCEEEE
T ss_pred             -------------------------------------------------------------------hheeccCcCceeE
Confidence                                                                               1112345677777


Q ss_pred             EEec------CCceEEEEecCCCCCCCceeeEEEEEE-eCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEEEEEe
Q psy8771         490 VRPL------SSSTMVIQWDEPETPNGQITGYKVYYT-QDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRVQAFT  560 (904)
Q Consensus       490 v~~~------~~~~~~l~W~~p~~~~~~i~~Y~v~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V~a~~  560 (904)
                      +...      ..+++.|+|++|...++.+.+|+|+|+ ....   ..|.....  ...+.+.+.+|.|++.|.|+|+|.|
T Consensus       211 ~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~---~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~  287 (313)
T 2d9q_B          211 MDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGE---ASWALVGPLPLEALQYELCGLLPATAYTLQIRCIR  287 (313)
T ss_dssp             CCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSC---CCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEE
T ss_pred             EEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCC---CCcEEcccccCcceEEEEeCCCCCCeEEEEEEeeE
Confidence            6654      468999999998654444689999999 4432   45765432  4567799999999999999999999


Q ss_pred             CCCCCC---CCCcEEEecCCCCCC
Q psy8771         561 SVGPGP---LSAPVLVKTQQGVPS  581 (904)
Q Consensus       561 ~~g~~~---~S~~~~~~t~~~~p~  581 (904)
                      ..|.|.   +|..+.+.|...+|.
T Consensus       288 ~~g~G~wS~wS~~~~~~T~~~~P~  311 (313)
T 2d9q_B          288 WPLPGHWSDWSPSLELRTTERAAA  311 (313)
T ss_dssp             CSSCCCCCCCCCCEEECCCC----
T ss_pred             CCCCCccCCCCCccceeCCccCCC
Confidence            987775   667778888766553

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}

Probab=99.92  E-value=5.7e-24  Score=220.40  Aligned_cols=277  Identities=15%  Similarity=0.206  Sum_probs=187.1

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-e--cCceEEEEc--CCCCCCeEEEEE
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-V--DNNQLTTIS--DLTPHTIYTIRV  556 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~--~~~~~~~~~--~L~p~t~Y~~~V  556 (904)
                      ..+|.+|.+...+ ..+.|+|++|.+.++.+. |.|+|+..+.   ..|.... .  ...+.+.+.  +|.+++.|.|+|
T Consensus         4 l~~P~nv~~~~~n-~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~---~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV   78 (306)
T 3s98_A            4 LKSPQKVEVDIID-DNFILRWNRSDESVGNVT-FSFDYQKTGM---DNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRI   78 (306)
T ss_dssp             ----CCCEEEEET-TEEEEECC--------CE-EEEEEEESSC---SSCEECTTCSSBSSSEEECCC---CTTSCEEEEE
T ss_pred             CCCCcEeEEEEEC-CeEEEEEcCCCCCCCCeE-EEEEEEECCC---CCcEECCCccCCCCCEEEccccccCCCCcEEEEE
Confidence            3578999998775 567899999876656665 9999998642   4565531 1  234455554  568999999999


Q ss_pred             EEEeCCCCCCCCCcEEEecCCCC-CCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccc
Q psy8771         557 QAFTSVGPGPLSAPVLVKTQQGV-PSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQET  635 (904)
Q Consensus       557 ~a~~~~g~~~~S~~~~~~t~~~~-p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~  635 (904)
                      +|.| .|.|++|....+.+.... +.+|. +.+.... ++|.|+|.++.. ++.+                         
T Consensus        79 ~A~n-~~~S~~s~~~~f~~~~~~~~~pP~-v~~~~~~-~si~v~w~P~~~-~~~~-------------------------  129 (306)
T 3s98_A           79 RAEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEAED-KAIVIHISPGTK-DSVM-------------------------  129 (306)
T ss_dssp             EEEC-SSCEEEEECCCBCHHHHCBCCCCE-EEEEECS-SCEEEEEECC----CCC-------------------------
T ss_pred             EEEe-CCcCCCEeeeeEechhhCccCCCe-EEEEEcC-CEEEEEEECCCC-CCcc-------------------------
Confidence            9999 887777655556554333 34444 7777644 689999995532 1000                         


Q ss_pred             eEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEc--CCCCCCCCCCeeEEecC
Q psy8771         636 AVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQS--PRGEGATTPPIPVRTKQ  713 (904)
Q Consensus       636 ~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~--~~G~~~~s~~~~~~t~~  713 (904)
                           |    ..++.+.+|.|.|+..+...... .......+.|.+|.|++.|.|+|+|++  ..|.|.+|..+.+.|..
T Consensus       130 -----~----~~~g~~l~Y~v~y~~~~~~~~~~-~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~  199 (306)
T 3s98_A          130 -----W----ALDGLSFTYSLVIWKNSSGVEER-IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV  199 (306)
T ss_dssp             -----C---------CCEEEEEEEETTTCCCEE-EEEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred             -----e----eccCCcEEEEEEEEECCCCCeEE-EecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence                 0    01457889999999886654322 334567899999999999999999999  67899999999999998


Q ss_pred             CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEc--------cCCCCccEEEEe---c--CcceEEec
Q psy8771         714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVET--------GRSDSEASIVTL---K--NQTSFVLD  780 (904)
Q Consensus       714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~--------~~~~~~~~~~~~---~--~~~~~~i~  780 (904)
                      ..|..+|.++.+... .+++.|+|+++.   .+   .+|.+.+...        ++..|    ..+   .  ..+.+.+.
T Consensus       200 ~~p~~~P~~v~~~~~-~~s~~l~W~~p~---~~---~~~~v~~~~gy~~~~~~~~~~~W----~~~~~c~~~~~~~c~~~  268 (306)
T 3s98_A          200 ENELPPPENIEVSVQ-NQNYVLKWDYTY---AN---MTFQVQWLHAFLKRNPGNHLYKW----KQIPDCENVKTTQCVFP  268 (306)
T ss_dssp             CCSSCCCEEEEEEEE-TTEEEEEEECSS---SS---CEEEEEEEEGGGGSCC----CCC----EECGGGTTBSSSEEEEE
T ss_pred             CCcCCCCceEEEEEe-cCEEEEEeCCCC---Cc---EEEEEEEehhhhhccccccccCc----eECCCceeCCCccccCc
Confidence            888888999999765 478999999873   22   2566666542        12222    222   1  56777787


Q ss_pred             C-CCCCceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         781 E-LKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       781 ~-L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      + |.+...|.|||+|.|..|.|.+|+.+.|.|..
T Consensus       269 ~~~~~~~~Y~~RV~A~n~~~~s~~s~~~~~~~~~  302 (306)
T 3s98_A          269 QNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEI  302 (306)
T ss_dssp             GGGSCSSEEEEEEEEECSSCBCCCCCCEEEEC--
T ss_pred             hhhcccCCEEEEEEEccCCCccccccccccCccc
Confidence            7 34555999999999999999999999998853

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=99.91  E-value=3.5e-23  Score=202.28  Aligned_cols=193  Identities=17%  Similarity=0.243  Sum_probs=162.0

Q ss_pred             cCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-cccc---eEEecccceEEEeCCCCCcEEEEEEEE
Q psy8771         619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KAKH---HRRIGLVETYSLTGLYPNTLYYIWLAA  694 (904)
Q Consensus       619 ~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~~---~~~~~~~~~~~l~~L~p~t~Y~v~V~a  694 (904)
                      ..|.+|.++.+.. +.+++.|+|.++..+++.+.+|.|+|+.... ..+.   .........+.+ +|.|++.|.|+|+|
T Consensus         4 ~~P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V~A   81 (205)
T 1cfb_A            4 DVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRVIA   81 (205)
T ss_dssp             CCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEEEE
T ss_pred             cCCCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEEEE
Confidence            4678999999999 9999999999998778899999999987643 2231   122234567777 99999999999999


Q ss_pred             EcCCCCCCCC-CCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-
Q psy8771         695 QSPRGEGATT-PPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-  772 (904)
Q Consensus       695 ~~~~G~~~~s-~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-  772 (904)
                      +|..|.|.+| ..+.++|.+..|..+|.++.+...+.+++.|+|++|.....||.+.+|.|+|+..+.... .....+. 
T Consensus        82 ~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~-~~~~~~~~  160 (205)
T 1cfb_A           82 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAA-WENNNIFD  160 (205)
T ss_dssp             EETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCC-CEEEEECC
T ss_pred             EECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCC-cEEEEecC
Confidence            9999999988 568899999989888999999999999999999999654688999999999998775432 2223333 


Q ss_pred             -CcceEEecCCCCCceEEEEEEEeeCCCCCCC-CCcEEeecCCC
Q psy8771         773 -NQTSFVLDELKKWTEYRIWVLAGTSIGDGPS-SYPITIRTHED  814 (904)
Q Consensus       773 -~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~-s~~~~~~t~~~  814 (904)
                       ..+.++|.+|.+++.|.|+|+|.|..|.|++ |.++.++|.++
T Consensus       161 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~e~  204 (205)
T 1cfb_A          161 WRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGED  204 (205)
T ss_dssp             TTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESSSC
T ss_pred             CCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecCCC
Confidence             6789999999999999999999999999995 78899998765

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=99.91  E-value=1.7e-23  Score=208.96  Aligned_cols=220  Identities=20%  Similarity=0.282  Sum_probs=165.6

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      .|+.+|.++.+...+.+++.|+|++|   ++.+.+|.|+|+...... ..+ .......+++.+.+|.|++.|.|+|+|+
T Consensus         4 ~p~~~P~~l~~~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~~-~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~   78 (234)
T 3f7q_A            4 MDLGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDSE-SEA-HLLDSKVPSVELTNLYPYCDYEMKVCAY   78 (234)
T ss_dssp             -CCCCCEEEEEEECSSSCEEEEEECC---SSCCCEEEEEEEETTSCG-GGC-EEEEESSSEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCCCCcceEEEEcCCCEEEEEEECC---CCccceEEEEEEECCCCc-cce-EEEcCCccEEEECCCCCCCEEEEEEEEE
Confidence            56789999999999999999999997   468899999999875432 222 3334677889999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEE
Q psy8771         560 TSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTL  639 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l  639 (904)
                      |..|.|.+|..+.+.|....|.+|.++.+...+.+++.|+|.++..                                  
T Consensus        79 n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~----------------------------------  124 (234)
T 3f7q_A           79 GAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAE----------------------------------  124 (234)
T ss_dssp             ETTEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSC----------------------------------
T ss_pred             eCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCC----------------------------------
Confidence            9999999999999999998999999999999999999999999865                                  


Q ss_pred             eccCCCCCCCceeeEEEEEEeCCccccc-------eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCC-CeeEEe
Q psy8771         640 AWSKPTHSGENIISYELYWNDTYAKAKH-------HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTP-PIPVRT  711 (904)
Q Consensus       640 ~w~~~~~~~~~~~~y~v~~~~~~~~~~~-------~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~-~~~~~t  711 (904)
                             .++.+.+|.|+|+..+.....       .........+.|.+|+|++.|.|+|+|+|..|.|.+|. .+.++|
T Consensus       125 -------~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T  197 (234)
T 3f7q_A          125 -------TNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLAT  197 (234)
T ss_dssp             -------CSSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGG
T ss_pred             -------CCCceeEEEEEEEECCCCCCccCcceEEEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeec
Confidence                   566788888888876544321       11123346899999999999999999999999999886 478889


Q ss_pred             cCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEE
Q psy8771         712 KQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE  758 (904)
Q Consensus       712 ~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~  758 (904)
                      .+..|..+|....+..+..             ..+..+++|.+++++
T Consensus       198 ~~~~P~~~P~~~~~~i~~~-------------~~g~~~~~~~~~~~~  231 (234)
T 3f7q_A          198 QPKRPMSIPIIPDIPIVDA-------------QSGEDYDSFLMYSDD  231 (234)
T ss_dssp             SCCCCCCCCCCTTCCEEET-------------TC-------------
T ss_pred             CCCCCCCCccccceeeEEc-------------ccCcchheeeeehhh
Confidence            8888887776444322211             233468889888765

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A

Probab=99.90  E-value=7.5e-23  Score=201.00  Aligned_cols=193  Identities=22%  Similarity=0.363  Sum_probs=160.5

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCC----CCceeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEE
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHS----GENIISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAA  694 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~----~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a  694 (904)
                      ++.+|.++.+...+.+++.|+|.++...    ++.+.+|.|+|+..+.... .........++.|.+|+|++.|.|+|+|
T Consensus         4 P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A   83 (211)
T 3p4l_A            4 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMV   83 (211)
T ss_dssp             CCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEESSSEEEECSCCTTCEEEEEEEE
T ss_pred             CCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCCceEEEecCcCCCCEEEEEEEE
Confidence            4568999999999999999999987533    5789999999998765543 2333455679999999999999999999


Q ss_pred             EcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec--CCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCC-ccEEEEe
Q psy8771         695 QSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS-EASIVTL  771 (904)
Q Consensus       695 ~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~--~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~-~~~~~~~  771 (904)
                      +|..|.|.+|..+.+.|.+..|..+|.++.+...  +.+++.|+|++|  ...+|.+.+|.|+|+..+.... ......+
T Consensus        84 ~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~  161 (211)
T 3p4l_A           84 TKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPP--SEANGKITGYIIYYSTDVNAEIHDWVIEPV  161 (211)
T ss_dssp             EETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECC--TTCCSCCCEEEEEEESCTTSCGGGSEEEEE
T ss_pred             EcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCC--CCCCCCEEEEEEEEEECCCCCCCceEEEEe
Confidence            9999999999999999999988878999999877  478999999998  4578999999999997654322 2233344


Q ss_pred             c-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         772 K-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       772 ~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      . ..+.++|.+|.|++.|.|+|+|.|..|.|++|+++.+.+...
T Consensus       162 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~~  205 (211)
T 3p4l_A          162 VGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKA  205 (211)
T ss_dssp             ESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC--
T ss_pred             cCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCccc
Confidence            4 889999999999999999999999999999999999988653

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A

Probab=99.90  E-value=2.4e-22  Score=197.37  Aligned_cols=193  Identities=21%  Similarity=0.342  Sum_probs=156.8

Q ss_pred             CCCCCCCCCeEEEecCCceEEEEecCCCCC----CCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEE
Q psy8771         479 YEPGTAPRDVQVRPLSSSTMVIQWDEPETP----NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTI  554 (904)
Q Consensus       479 ~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~  554 (904)
                      +.|+.+|.++.+...+.+++.|+|++|...    ++.+.+|.|+|+..+... ..+. ......+++.+.+|.|++.|.|
T Consensus         2 d~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~-~~~~-~~~~~~~~~~i~~L~p~t~Y~~   79 (211)
T 3p4l_A            2 DLPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN-TKYK-NANATTLSYLVTGLKPNTLYEF   79 (211)
T ss_dssp             -CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC----CCCE-EEEESSSEEEECSCCTTCEEEE
T ss_pred             CCCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCc-ceEE-EeCCCceEEEecCcCCCCEEEE
Confidence            467889999999999999999999997533    568899999999876432 2222 2346677899999999999999


Q ss_pred             EEEEEeCCCCCCCCCcEEEecCCCCCC-CCCCceEEec--CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEe
Q psy8771         555 RVQAFTSVGPGPLSAPVLVKTQQGVPS-QPRDLRAVDI--QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVD  631 (904)
Q Consensus       555 ~V~a~~~~g~~~~S~~~~~~t~~~~p~-~p~~~~~~~~--~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~  631 (904)
                      +|+|+|..|.|.+|..+.+.|....|. +|.++.+...  +.+++.|+|.++..                          
T Consensus        80 ~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~--------------------------  133 (211)
T 3p4l_A           80 SVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSE--------------------------  133 (211)
T ss_dssp             EEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTT--------------------------
T ss_pred             EEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCC--------------------------
Confidence            999999999999999999999988887 8889998887  36799999998865                          


Q ss_pred             eccceEEEeccCCCCCCCceeeEEEEEEeCCcccc---c-eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCe
Q psy8771         632 IQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK---H-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI  707 (904)
Q Consensus       632 ~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~---~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~  707 (904)
                                     .++.+.+|.|+|+..+....   . ........++.|.+|.|++.|.|+|+|+|..|.|++|..+
T Consensus       134 ---------------~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v  198 (211)
T 3p4l_A          134 ---------------ANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAV  198 (211)
T ss_dssp             ---------------CCSCCCEEEEEEESCTTSCGGGSEEEEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCE
T ss_pred             ---------------CCCCEEEEEEEEEECCCCCCCceEEEEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence                           56678888888887655432   1 2344567799999999999999999999999999999999


Q ss_pred             eEEecCC
Q psy8771         708 PVRTKQY  714 (904)
Q Consensus       708 ~~~t~~~  714 (904)
                      .+.+...
T Consensus       199 ~~~~~~~  205 (211)
T 3p4l_A          199 QFRTPKA  205 (211)
T ss_dssp             EEECC--
T ss_pred             EccCccc
Confidence            9888654

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A

Probab=99.90  E-value=1.9e-21  Score=204.66  Aligned_cols=265  Identities=14%  Similarity=0.190  Sum_probs=183.1

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccC-CCCceeecceEEEEeee--cCCeEEEEEEEecCcce
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELT-PDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVI  182 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~-~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~  182 (904)
                      +..++.. +.+..|++++|.|.+.|.+ .+.|.|+++ +..+. ...++...++.|.|.++  +|+|.|+|.   ..|..
T Consensus         9 ~~~p~~~-v~~~~G~~v~l~C~~~~~~~~~~i~W~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~---~~g~~   83 (325)
T 1n26_A            9 QEVARGV-LTSLPGDSVTLTCPGVEPEDNATVHWVLR-KPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCY---RAGRP   83 (325)
T ss_dssp             CCCCTTE-EEECTTCCEEEECTTSCTTCCSEEEEEEE-CSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEE---SSSSC
T ss_pred             cccCCCc-EECCCCCcEEEEeCCCCCCCCceEEEEEC-CccCCccccccccccceEEecccchhhCeEeEEE---eCCEE
Confidence            3333433 6668999999999999865 789999998 43332 22344456789999999  599999999   36888


Q ss_pred             EEEEEEEEEeecCCCCCCCCCCcceEEEe-ecCCeEEEEEeCC--CccceEEEEEEEeCCCC--CCe-EEe---ecceec
Q psy8771         183 ETSTIVKVQCKYAPLLTLPVAPLDVKISE-VTATSVRLDWTYP--SETLLYYVIQYKPKAAN--TPY-SEI---SGIITT  253 (904)
Q Consensus       183 ~~~~~l~v~~~~~~~~~~P~~p~~l~~~~-~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~--~~~-~~~---~~~~~~  253 (904)
                      .+.+.|.|.       .+|.+|. +.+.. ....++.|+|.++  ......|.|.++...+.  ..+ ...   ......
T Consensus        84 ~~~~~L~V~-------~pP~~P~-l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~  155 (325)
T 1n26_A           84 AGTVHLLVD-------VPPEEPQ-LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKF  155 (325)
T ss_dssp             SCEEEEEEC-------CCCCCCC-CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEESSSSCEEEEEEEEEETTTTEE
T ss_pred             eeeEEEEec-------cCCCCCc-eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEccCCCCCcccccCCCCCCCCCE
Confidence            888999998       7888887 77763 4467999999986  33457899988754211  111 111   112235


Q ss_pred             eEEEcCCC-CCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEe
Q psy8771         254 YYTVRNLS-PYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRR  332 (904)
Q Consensus       254 ~~~i~~L~-p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~  332 (904)
                      .+.|..+. +++.|.|+|.|.|..|.+. +....+                                             
T Consensus       156 ~c~i~~~~~~~~~Y~f~v~A~N~~G~~~-s~~~~~---------------------------------------------  189 (325)
T 1n26_A          156 SCQLAVPEGDSSFYIVSMCVASSVGSKF-SKTQTF---------------------------------------------  189 (325)
T ss_dssp             EEEECCCTTCCCEEEEEEEEEETTEEEE-CCCEEE---------------------------------------------
T ss_pred             EEEECCCcccCcEEEEEEEEEcCCCCcc-cCcEEE---------------------------------------------
Confidence            56666665 5677777777777666431 111111                                             


Q ss_pred             eceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEE
Q psy8771         333 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYI  412 (904)
Q Consensus       333 ~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~  412 (904)
                                                                                                      
T Consensus       190 --------------------------------------------------------------------------------  189 (325)
T 1n26_A          190 --------------------------------------------------------------------------------  189 (325)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEe
Q psy8771         413 WLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRP  492 (904)
Q Consensus       413 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~  492 (904)
                                                                                    ......++.+|.++.+..
T Consensus       190 --------------------------------------------------------------~~~~~v~P~pP~~l~v~~  207 (325)
T 1n26_A          190 --------------------------------------------------------------QGCGILQPDPPANITVTA  207 (325)
T ss_dssp             --------------------------------------------------------------ETTTCBCCCCCEEEEEEE
T ss_pred             --------------------------------------------------------------eeccccCCCCCcceEEEE
Confidence                                                                          111112346788888887


Q ss_pred             cCC--ceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEeCCCCCCC
Q psy8771         493 LSS--STMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFTSVGPGPL  567 (904)
Q Consensus       493 ~~~--~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~  567 (904)
                      .+.  +++.|+|++|..  .++.+.+|+|+|+....   ..|..... ...+++.+.+|.|++.|.|+|+|.|..|.|.+
T Consensus       208 ~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~---~~W~~~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~  284 (325)
T 1n26_A          208 VARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERS---KTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEW  284 (325)
T ss_dssp             CTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTC---SCCEEEECGGGCSEEEESSCCTTCCEEEEEEEEETTTBSCC
T ss_pred             ecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCC---CCCEEEcccCCceEEEEeCCCCCCeEEEEEEEecCCCCCCC
Confidence            653  699999999865  34578999999998753   45766543 44578899999999999999999998887665


Q ss_pred             C---CcEEEec
Q psy8771         568 S---APVLVKT  575 (904)
Q Consensus       568 S---~~~~~~t  575 (904)
                      |   ..+.+++
T Consensus       285 S~wS~~~~~~~  295 (325)
T 1n26_A          285 SEWSPEAMGTP  295 (325)
T ss_dssp             CCCCCCEEECC
T ss_pred             cCCCCccceec
Confidence            5   4444444

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=99.89  E-value=3e-22  Score=199.96  Aligned_cols=193  Identities=23%  Similarity=0.385  Sum_probs=162.2

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR  698 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~  698 (904)
                      .+.+|.+|++...+.+++.|+|.++   ++.+.+|.|+|+..+.... .........++.|.+|+|++.|.|+|+|+|..
T Consensus         5 p~~~P~~l~~~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   81 (234)
T 3f7q_A            5 DLGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQ   81 (234)
T ss_dssp             CCCCCEEEEEEECSSSCEEEEEECC---SSCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCCCcceEEEEcCCCEEEEEEECC---CCccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            4678999999999999999999996   4689999999998765443 33444567799999999999999999999999


Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCc---cEEEEec--C
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE---ASIVTLK--N  773 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~---~~~~~~~--~  773 (904)
                      |.|.+|..+.++|...+|.. |.++.+...+.+++.|+|++|  ...+|.+.+|.|+|+..+.....   .......  .
T Consensus        82 G~g~~s~~~~~~T~~~~P~~-P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~  158 (234)
T 3f7q_A           82 GEGPYSSLVSCRTHQEVPSE-PGRLAFNVVSSTVTQLSWAEP--AETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPK  158 (234)
T ss_dssp             EECCCCCCEEEECCCCCCCC-CCCCEEEECSSSCEEEECCCC--SCCSSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTT
T ss_pred             CcCCCCCeEEEEcCCCCCCC-CCccEEEEecCCEEEEEEcCC--CCCCCceeEEEEEEEECCCCCCccCcceEEEecCCc
Confidence            99999999999999988874 788999999999999999998  45788999999999987654321   1112222  5


Q ss_pred             cceEEecCCCCCceEEEEEEEeeCCCCCCCCCc-EEeecCCCCCCC
Q psy8771         774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP-ITIRTHEDDPSE  818 (904)
Q Consensus       774 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~-~~~~t~~~~P~~  818 (904)
                      .+.++|.+|+|++.|.|+|+|.|..|.|++|.. +.++|.+.+|..
T Consensus       159 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~~  204 (234)
T 3f7q_A          159 NRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMS  204 (234)
T ss_dssp             CCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCCC
T ss_pred             ceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCCCC
Confidence            679999999999999999999999999999874 778898887743

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}

Probab=99.89  E-value=3.2e-22  Score=207.25  Aligned_cols=266  Identities=14%  Similarity=0.038  Sum_probs=175.5

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE---EecccceEEE--eCCCCCcEEEEEEEE
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR---RIGLVETYSL--TGLYPNTLYYIWLAA  694 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~---~~~~~~~~~l--~~L~p~t~Y~v~V~a  694 (904)
                      ..++|++|.+...+ ..+.|+|.++..+.+.+. |.|+|+..+...|...   .......+.|  .+|.+++.|.|+|+|
T Consensus         3 ~l~~P~nv~~~~~n-~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A   80 (306)
T 3s98_A            3 PLKSPQKVEVDIID-DNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA   80 (306)
T ss_dssp             -----CCCEEEEET-TEEEEECC--------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEE
T ss_pred             CCCCCcEeEEEEEC-CeEEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEE
Confidence            35789999998774 457899999877666776 9999998765555322   1122345555  457899999999999


Q ss_pred             EcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCC-----CCccEEEEEEEEEEccCCCCccEEE
Q psy8771         695 QSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER-----SNGHIVYYKLQFVETGRSDSEASIV  769 (904)
Q Consensus       695 ~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~-----~~g~~~~Y~v~~~~~~~~~~~~~~~  769 (904)
                      .| .|.|.++....+.+....+..||. +.+.... ++|.|+|.++. ..     .+|.+.+|+|.|+..+.... ..  
T Consensus        81 ~n-~~~S~~s~~~~f~~~~~~~~~pP~-v~~~~~~-~si~v~w~P~~-~~~~~~~~~g~~l~Y~v~y~~~~~~~~-~~--  153 (306)
T 3s98_A           81 EK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEAED-KAIVIHISPGT-KDSVMWALDGLSFTYSLVIWKNSSGVE-ER--  153 (306)
T ss_dssp             EC-SSCEEEEECCCBCHHHHCBCCCCE-EEEEECS-SCEEEEEECC----CCCC-----CCEEEEEEEETTTCCC-EE--
T ss_pred             Ee-CCcCCCEeeeeEechhhCccCCCe-EEEEEcC-CEEEEEEECCC-CCCcceeccCCcEEEEEEEEECCCCCe-EE--
Confidence            99 888877766677766655565665 7777544 68999999553 21     15789999999998765432 11  


Q ss_pred             EecCcceEEecCCCCCceEEEEEEEee--CCCCCCCCCcEEeecCCCCCCC------CccC----CcceeeCCCCCceee
Q psy8771         770 TLKNQTSFVLDELKKWTEYRIWVLAGT--SIGDGPSSYPITIRTHEDDPSE------VCPT----QNDFRKNKKTNGSNF  837 (904)
Q Consensus       770 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~--~~g~g~~s~~~~~~t~~~~P~~------v~~~----~~~W~~p~~~~~~~~  837 (904)
                      .....+.+.|.+|+|++.|.|+|+|.+  ..|.|++|.++.++|..+.|.+      +...    .++|+++....++..
T Consensus       154 ~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~~~~~~s~~l~W~~p~~~~~~~v  233 (306)
T 3s98_A          154 IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQV  233 (306)
T ss_dssp             EEEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEEEEETTEEEEEEECSSSSCEEEE
T ss_pred             EecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEEEEecCEEEEEeCCCCCcEEEEE
Confidence            122668899999999999999999999  6799999999999997665422      1111    239998764333323


Q ss_pred             eeee--------ecCCceEE---ecCCCeeEEEEcCC-CCCcEEEEEEEEEecCCCCCCCCceEEecCC
Q psy8771         838 KGGY--------LNDPMRFD---VSDGGALELNVTGL-QPDTIYTIQVAALTRKGDGDRSKPETIKTPG  894 (904)
Q Consensus       838 ~~~~--------~~~~~~~~---~~~~~~~~~~i~~L-~p~t~Y~~~v~a~n~~G~g~~s~~~~~~t~~  894 (904)
                      .+..        .+...+..   +.+...+.|.+.+| .++..|.|||+|.|..|.|.+|....|.|..
T Consensus       234 ~~~~gy~~~~~~~~~~~W~~~~~c~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s~~~~~~~~~  302 (306)
T 3s98_A          234 QWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEI  302 (306)
T ss_dssp             EEEEGGGGSCC----CCCEECGGGTTBSSSEEEEEGGGSCSSEEEEEEEEECSSCBCCCCCCEEEEC--
T ss_pred             EEehhhhhccccccccCceECCCceeCCCccccCchhhcccCCEEEEEEEccCCCccccccccccCccc
Confidence            2221        12334543   24567778888884 4555999999999999999999999998864

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}

Probab=99.89  E-value=1.1e-21  Score=212.96  Aligned_cols=121  Identities=12%  Similarity=0.081  Sum_probs=94.4

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      .+..+...|.+ ..+..|++++|.|.+.   .+.|.|+++ +..+... ++....+.|.|.++  +|+|.|.|.+.+  +
T Consensus       202 ~~t~i~v~P~~-~~v~~Gs~vtl~C~a~---~~~I~W~~n-g~~i~~~-ri~~~~~~L~I~nl~~sd~g~y~~~C~~--~  273 (488)
T 2q7n_A          202 RNTETNVFPQD-KVVLAGSNMTICCMSP---TKVLSGQIG-NTLRPLI-HLYGQTVAIHILNIPVSENSGTNIIFIT--D  273 (488)
T ss_dssp             CCSSCCEECTT-CEEESSCCCEEEECCS---SCEEEEEET-TEECCCE-ECSSSCEEEECCSCCCCCSSCEEEEEEE--S
T ss_pred             CCCceEECCCC-CEEcCCCCEEEEEECC---CCEEEEEEC-CEECchh-hccceEEEEEEeCCCcccCCcEEEEEEc--C
Confidence            44456667777 7789999999999999   468999999 6666543 44445678999999  578888887763  3


Q ss_pred             ceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCc------cceEEEEEEEeC
Q psy8771         181 VIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE------TLLYYVIQYKPK  238 (904)
Q Consensus       181 ~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~------~~~~y~v~~~~~  238 (904)
                      .....+.|.+.       .+|.+|.++.+......+++|+|.++..      ....|.|.++..
T Consensus       274 ~~i~~~~l~v~-------~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~  330 (488)
T 2q7n_A          274 DDVYGTVVFAG-------YPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESIS  330 (488)
T ss_dssp             SCEEEEEEEEE-------CCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTT
T ss_pred             CeEEEEEEEee-------CCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEEC
Confidence            33457788887       8999999999988888999999999822      367999998754

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=99.89  E-value=1.2e-21  Score=191.37  Aligned_cols=192  Identities=18%  Similarity=0.326  Sum_probs=154.5

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE---eecCceEEEEcCCCCCCeEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ---VVDNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      .+|.+|.++.+.. +.+++.|+|++|.+.++.+.+|.|+|+.....  ..|...   .....+.+.+ +|.|++.|.|+|
T Consensus         4 ~~P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V   79 (205)
T 1cfb_A            4 DVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTP--ASWDAAYEKVPNTDSSFVV-QMSPWANYTFRV   79 (205)
T ss_dssp             CCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSST--TCCEEEEEEEETTCSEEEE-ECCSSEEEEEEE
T ss_pred             cCCCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCC--CCceeeeeccCCCceEEEE-eCCCCCEEEEEE
Confidence            3457999999999 99999999999977778999999999876422  345322   2245667777 999999999999


Q ss_pred             EEEeCCCCCCCC-CcEEEecCCCCCC-CCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeecc
Q psy8771         557 QAFTSVGPGPLS-APVLVKTQQGVPS-QPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQE  634 (904)
Q Consensus       557 ~a~~~~g~~~~S-~~~~~~t~~~~p~-~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~  634 (904)
                      +|+|..|.|.+| ....+.|....|. +|.++.+...+.+++.|+|.++..                             
T Consensus        80 ~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~-----------------------------  130 (205)
T 1cfb_A           80 IAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPE-----------------------------  130 (205)
T ss_dssp             EEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCG-----------------------------
T ss_pred             EEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCc-----------------------------
Confidence            999999999888 5578888877774 788999999899999999998861                             


Q ss_pred             ceEEEeccCCCCCCCceeeEEEEEEeCCccc-cceEEe--cccceEEEeCCCCCcEEEEEEEEEcCCCCCCC-CCCeeEE
Q psy8771         635 TAVTLAWSKPTHSGENIISYELYWNDTYAKA-KHHRRI--GLVETYSLTGLYPNTLYYIWLAAQSPRGEGAT-TPPIPVR  710 (904)
Q Consensus       635 ~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~~~~~~--~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~-s~~~~~~  710 (904)
                                ...++.+.+|.|+|+..+... +.....  ....++.|.+|.|++.|.|+|+|+|..|.|.+ |..+.++
T Consensus       131 ----------~~~ng~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~  200 (205)
T 1cfb_A          131 ----------IEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGY  200 (205)
T ss_dssp             ----------GGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEE
T ss_pred             ----------cccCCCceEEEEEEEECCCCCCcEEEEecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEe
Confidence                      015667889999998877654 333222  24679999999999999999999999999995 6788888


Q ss_pred             ecCC
Q psy8771         711 TKQY  714 (904)
Q Consensus       711 t~~~  714 (904)
                      |.++
T Consensus       201 T~e~  204 (205)
T 1cfb_A          201 SGED  204 (205)
T ss_dssp             SSSC
T ss_pred             cCCC
Confidence            8765

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*

Probab=99.89  E-value=7.7e-22  Score=210.61  Aligned_cols=303  Identities=13%  Similarity=0.104  Sum_probs=166.6

Q ss_pred             eEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecC-CceEEEEecCCCC---CCCceeeEEEEEEeCCCCC
Q psy8771         451 TLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS-SSTMVIQWDEPET---PNGQITGYKVYYTQDQSLP  526 (904)
Q Consensus       451 ~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~-~~~~~l~W~~p~~---~~~~i~~Y~v~~~~~~~~~  526 (904)
                      ..|.+.+-+.+..|.+..+       ....++.+|.++.+...+ .+++.|+|+++.+   .++.+..|+|+|+..++  
T Consensus         8 ~~~~~~~~~~~~~~~~~~~-------~~~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~--   78 (380)
T 3lb6_C            8 VGCLYTFLISTTFGCTSSS-------DTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGS--   78 (380)
T ss_dssp             ------------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTC--
T ss_pred             hhhhhhheeecccccccCC-------cccccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCC--
Confidence            3566677777776654321       122346789999998776 6899999999875   33568999999998762  


Q ss_pred             CcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC----CCCCCCCCcEEEec---CCCC-CCCCCCceEEecCCCeEEE
Q psy8771         527 MSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS----VGPGPLSAPVLVKT---QQGV-PSQPRDLRAVDIQETAVTL  598 (904)
Q Consensus       527 ~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~----~g~~~~S~~~~~~t---~~~~-p~~p~~~~~~~~~~~~~~l  598 (904)
                       ..|+.........  ..++..++.|.|+|+|+|.    .|.|.+|......+   .++. |.+|.++.+...+.+.+.+
T Consensus        79 -~~w~~~~~~~~~~--~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~c  155 (380)
T 3lb6_C           79 -ETWKTIITKNLHY--KDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLC  155 (380)
T ss_dssp             -SSCEEEEESSSEE--EEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEE
T ss_pred             -CcceEEEeccEEE--EEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEE
Confidence             4577766654333  3455669999999999965    66676666554443   4344 4589999999989999999


Q ss_pred             EEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc---ceEE-e-cc
Q psy8771         599 AWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK---HHRR-I-GL  673 (904)
Q Consensus       599 ~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~---~~~~-~-~~  673 (904)
                      +|+++..                                          .+...+|.|.|+..+....   .... . +.
T Consensus       156 sW~p~~~------------------------------------------~~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~  193 (380)
T 3lb6_C          156 SWKPGIG------------------------------------------VLLDTNYNLFYWYEGLDHALQCVDYIKADGQ  193 (380)
T ss_dssp             EEECC------------------------------------------------CCEEEEEECTTCSSCEECSEEEEC--C
T ss_pred             EEcCCCC------------------------------------------CCCCccEEEEEEECCCCccccCCCccccCCc
Confidence            9998753                                          2345678888876554321   1111 1 22


Q ss_pred             cceEEEe--CCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEE
Q psy8771         674 VETYSLT--GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVY  751 (904)
Q Consensus       674 ~~~~~l~--~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~  751 (904)
                      ...+.+.  ++.+.+.|.|+|.|.|..|.+.. ..+.+.+....++.||.++.+...+.+++.|+|++|.. ...+.+.+
T Consensus       194 ~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s-~~~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~-~~~~~~l~  271 (380)
T 3lb6_C          194 NIGCRFPYLEASDYKDFYICVNGSSENKPIRS-SYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLG-PIPARCFD  271 (380)
T ss_dssp             EEEEECCCCTTCSSSCEEEEEEEC-----CCC-EEEEECGGGSCCCCCCEEEEEC-------CEEEECCSS-SCCSTTEE
T ss_pred             eEEEEeCCCcccceeEEEEEEEEEcCCeeecc-ccEEEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCC-CCCcceEE
Confidence            2355555  56888999999999998876543 34567776666666899999987778899999999853 12246789


Q ss_pred             EEEEEEEccCCCCccEEEEecCcceEEecC-CCCCceEEEEEEEeeC-----CC-CCCCCCcEEeecCCC
Q psy8771         752 YKLQFVETGRSDSEASIVTLKNQTSFVLDE-LKKWTEYRIWVLAGTS-----IG-DGPSSYPITIRTHED  814 (904)
Q Consensus       752 Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~~~V~a~~~-----~g-~g~~s~~~~~~t~~~  814 (904)
                      |+|+|+..+. .+.    .......+.|.+ |+|++.|.|+|+|...     .| .|++|+++.+.|..+
T Consensus       272 Yev~y~~~~~-~w~----~~~~~~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~  336 (380)
T 3lb6_C          272 YEIEIREDDT-TLV----TATVENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDL  336 (380)
T ss_dssp             EEECC-------------CCEESSSCC------------CCEEEEECTTTCSSCCCCCCCCC--------
T ss_pred             EEEEEEeCCC-Cce----EecccceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCC
Confidence            9999998532 221    111123577888 9999999999999943     23 377788888888654

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=99.89  E-value=8.9e-22  Score=192.96  Aligned_cols=189  Identities=19%  Similarity=0.285  Sum_probs=155.7

Q ss_pred             ccCCCCCcceEEEeeccceEEEeccCCCCCCCc-eeeEEEEEEeCCccccceEEec-----ccceEEEeCCCCCcEEEEE
Q psy8771         618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN-IISYELYWNDTYAKAKHHRRIG-----LVETYSLTGLYPNTLYYIW  691 (904)
Q Consensus       618 ~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~-~~~y~v~~~~~~~~~~~~~~~~-----~~~~~~l~~L~p~t~Y~v~  691 (904)
                      .+.|.+|.++.+...+. ++.|+|.++...++. +.+|.|+|+..+...+......     ....+.+.+|+|++.|.|+
T Consensus         6 ~~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~   84 (209)
T 2vkw_A            6 ADTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR   84 (209)
T ss_dssp             CCCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEE
T ss_pred             cCCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEE
Confidence            44678899999988887 689999998765664 9999999998876666443322     2468999999999999999


Q ss_pred             EEEEcCCCCCCCCCCeeEEecCC-CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE
Q psy8771         692 LAAQSPRGEGATTPPIPVRTKQY-VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT  770 (904)
Q Consensus       692 V~a~~~~G~~~~s~~~~~~t~~~-~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~  770 (904)
                      |+|+|..|.|.+|..+.+.|... +|. +|.++.+...+.+++.|+|++|  +..++.+.+|.|+|+. ....+.. ...
T Consensus        85 V~A~n~~G~~~~s~~~~~~T~~~~~P~-~P~~~~~~~~~~~sv~l~W~~p--~~~~~~i~~Y~v~~~~-~~~~~~~-~~~  159 (209)
T 2vkw_A           85 LAALNGKGLGEISAASEFKTQPVREPS-APKLEGQMGEDGNSIKVNLIKQ--DDGGSPIRHYLVRYRA-LSSEWKP-EIR  159 (209)
T ss_dssp             EEEEETTEECCCCCCEEEECCCSCSCC-CCEEEEEECTTSSCEEEEEECC--CCTTSCCCEEEEEEEE-TTSCCCC-CEE
T ss_pred             EEEEcCCcccCCcccccccccCCCCCC-CCcccccccccCCeEEEEEECc--ccCCCCCceEEEEEEC-CCCCCce-eee
Confidence            99999999999998888888876 455 6778888889999999999998  5678999999999998 3333322 233


Q ss_pred             ec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecC
Q psy8771         771 LK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTH  812 (904)
Q Consensus       771 ~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~  812 (904)
                      +. ..+.++|.+|++++.|.|+|+|.|..|.|++|....+++.
T Consensus       160 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~~  202 (209)
T 2vkw_A          160 LPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAA  202 (209)
T ss_dssp             ECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC-
T ss_pred             cCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhhh
Confidence            44 7789999999999999999999999999999987776654

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=99.88  E-value=1.8e-21  Score=191.66  Aligned_cols=190  Identities=17%  Similarity=0.216  Sum_probs=153.1

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-cccceEE-------------ecccceEEEeCCCCCc
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KAKHHRR-------------IGLVETYSLTGLYPNT  686 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~~~~~-------------~~~~~~~~l~~L~p~t  686 (904)
                      +.+|.++.+..++.+++.|+|.++...++.+.+|.|+|+..+. ..+....             ......+.+.+|.|++
T Consensus         2 ~~pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t   81 (214)
T 2ibg_A            2 TYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQH   81 (214)
T ss_dssp             CCCCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTC
T ss_pred             CCCCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCC
Confidence            4688999999999999999999988777899999999998654 2221111             0345688999999999


Q ss_pred             EEEEEEEEEcCCCCCCCCC-CeeEEecCC---CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccC-
Q psy8771         687 LYYIWLAAQSPRGEGATTP-PIPVRTKQY---VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGR-  761 (904)
Q Consensus       687 ~Y~v~V~a~~~~G~~~~s~-~~~~~t~~~---~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~-  761 (904)
                      .|.|+|+|+|..|.|..+. ...+.+...   .|..+|.++.+...+.+++.|+|+++. +..++.+.+|.|+|+..+. 
T Consensus        82 ~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~~i~~Y~v~~~~~~~~  160 (214)
T 2ibg_A           82 TYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLAS-DADEHLITGYYAYYRPSSSA  160 (214)
T ss_dssp             EEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCT-TCCGGGCCEEEEEEEETTCC
T ss_pred             EEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCC-ccCCCCcceEEEEEEECCCC
Confidence            9999999999999877665 344444433   233467889998889999999999996 4678999999999998775 


Q ss_pred             CCCccEEEEec--CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         762 SDSEASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       762 ~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      ..+  ....+.  ..+.++|.+|+|++.|.|+|+|.|..|.|++|..+.++|..
T Consensus       161 ~~~--~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  212 (214)
T 2ibg_A          161 GEY--FKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR  212 (214)
T ss_dssp             SCC--EEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred             cce--EEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence            223  223333  57899999999999999999999999999999999999964

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A

Probab=99.88  E-value=1.6e-20  Score=205.03  Aligned_cols=305  Identities=18%  Similarity=0.244  Sum_probs=198.3

Q ss_pred             eccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCC------CceeeEEEEE
Q psy8771         446 ALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN------GQITGYKVYY  519 (904)
Q Consensus       446 ~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~------~~i~~Y~v~~  519 (904)
                      .+.-...|.|+|+|.|..|.     ...+.......+.||.+|.+...+ +.+.|+|++|....      +....|.|+|
T Consensus        78 ~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~y  151 (419)
T 2gys_A           78 SFVVTDVDYFSFQPDRPLGT-----RLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVY  151 (419)
T ss_dssp             CCCTTCEEEEEEEESSCCCE-----EEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEE
T ss_pred             ceeeecccEEEEeCCccccc-----cceEcHHHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEE
Confidence            34456789999999665443     233444444667899999998776 69999999976432      3468899999


Q ss_pred             EeCCCCCCcceEEEeecCceEEEEc--CCCCCCeEEEEEEEEeCCC---CC---CCCCcEEEecCCCCCCCCCCceEEec
Q psy8771         520 TQDQSLPMSAWETQVVDNNQLTTIS--DLTPHTIYTIRVQAFTSVG---PG---PLSAPVLVKTQQGVPSQPRDLRAVDI  591 (904)
Q Consensus       520 ~~~~~~~~~~~~~~~~~~~~~~~~~--~L~p~t~Y~~~V~a~~~~g---~~---~~S~~~~~~t~~~~p~~p~~~~~~~~  591 (904)
                      +... ..+..... .......+.+.  +|.|++.|.|+|+|.+..|   .|   .||..+.+.+..+.|.+|.++.+...
T Consensus       152 r~~~-~~w~~~~~-~~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~  229 (419)
T 2gys_A          152 KRLQ-DSWEDAAI-LLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFD  229 (419)
T ss_dssp             EETT-SCSTTCEE-EEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEEEC
T ss_pred             ccCC-CChhheee-ecccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEEEC
Confidence            9875 22222112 12234555666  9999999999999999643   33   45677888898888889999999988


Q ss_pred             CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcc-----c-
Q psy8771         592 QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK-----A-  665 (904)
Q Consensus       592 ~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~-----~-  665 (904)
                      +.+.+.+.|++...                                         .. ...+|.|.|+.....     . 
T Consensus       230 ~~~~l~c~W~~~~~-----------------------------------------~~-~~~~y~l~y~~~~~~g~~~~~~  267 (419)
T 2gys_A          230 GAAVLSCSWEVRKE-----------------------------------------VA-SSVSFGLFYKPSPDAGSAVLLR  267 (419)
T ss_dssp             SSSEEEEEEEEEHH-----------------------------------------HH-TTCCEEEEEECC-----CCCCC
T ss_pred             CceEEEeEEECCCC-----------------------------------------CC-CceeEEEEEEecCccccccCcc
Confidence            88999999998632                                         01 123466666654210     0 


Q ss_pred             c---ce-EEe-------cccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEE
Q psy8771         666 K---HH-RRI-------GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIR  734 (904)
Q Consensus       666 ~---~~-~~~-------~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~  734 (904)
                      .   .. ...       .....+.+.+|.+.+.|.|+|.|.++.|        .+.+.......|| .+.+.. ..+++.
T Consensus       268 ~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~~~--------~~~~~~~v~p~PP-~l~v~~-~~~~l~  337 (419)
T 2gys_A          268 EEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEK--------HIKSSVNIQMAPP-SLQVTK-DGDSYS  337 (419)
T ss_dssp             CEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCCCE--------EEEGGGSBCCCCC-EEEEC----CCCE
T ss_pred             cccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEEEccCCc--------cccceEEEEECCC-CeEEEE-eCCeEE
Confidence            0   00 110       0122566788999999999999975432        1222222233355 466655 478999


Q ss_pred             EEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCC-----CCCCCCcEEe
Q psy8771         735 ISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIG-----DGPSSYPITI  809 (904)
Q Consensus       735 l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g-----~g~~s~~~~~  809 (904)
                      |+|++|.....+ .+.+|+|+|+..+..........+...+.+.|.+|+|++.|.|+|+|.+..|     .|.+|.++.+
T Consensus       338 l~W~~P~~~~~~-~~l~Yev~y~~~~~~w~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~  416 (419)
T 2gys_A          338 LRWETMKMRYEH-IDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSW  416 (419)
T ss_dssp             EEEEC---------CEEEEEEEECSSSCSTTSCEEEEESCSEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEEC
T ss_pred             EEECCCcccccc-cceEEEEEEEcCCCCcceeeccccccccEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEe
Confidence            999999532222 4779999999876431112122222678999999999999999999999763     3477888877


Q ss_pred             ec
Q psy8771         810 RT  811 (904)
Q Consensus       810 ~t  811 (904)
                      .|
T Consensus       417 ~t  418 (419)
T 2gys_A          417 DT  418 (419)
T ss_dssp             CC
T ss_pred             eC
Confidence            66

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*

Probab=99.88  E-value=4.3e-21  Score=200.89  Aligned_cols=276  Identities=13%  Similarity=0.135  Sum_probs=185.7

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCC-CCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEe-
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETP-NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFT-  560 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~-~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~-  560 (904)
                      .+|.+|++.....+++.|+|++|... ++.+.+|.|.+....       .....  ...+.+.+|.++..|.|+|+|.+ 
T Consensus         5 ~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~~-------~~~~~--~~~~~~~~~~~~~~y~~~V~a~~~   75 (314)
T 3bpo_C            5 PPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQ-------DKKIA--PETRRSIEVPLNERICLQVGSQCS   75 (314)
T ss_dssp             CCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC--C-------CCEEE--SSSEEEEECCCSSCEEEEEEECC-
T ss_pred             CCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEecccC-------ceEec--cccEEEEEEcCCCcEEEEEEEEec
Confidence            68999999988899999999998654 567789999874421       11111  22346678999999999999964 


Q ss_pred             CCCCCCCCCcEEEe--cCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceE
Q psy8771         561 SVGPGPLSAPVLVK--TQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAV  637 (904)
Q Consensus       561 ~~g~~~~S~~~~~~--t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~  637 (904)
                      ..|.|..|..+...  +..+ +|.+|.++.+...+...+.++|.++..                                
T Consensus        76 ~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~--------------------------------  123 (314)
T 3bpo_C           76 TNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRN--------------------------------  123 (314)
T ss_dssp             --------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC---------------------------------
T ss_pred             CCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCC--------------------------------
Confidence            56666677766532  3333 445889999998888999999998863                                


Q ss_pred             EEeccCCCCCCCceeeEEEEEEeCCccccc----eEEecccceEEEeCCC----CCcEEEEEEEEEcCCCCCCCCCCeeE
Q psy8771         638 TLAWSKPTHSGENIISYELYWNDTYAKAKH----HRRIGLVETYSLTGLY----PNTLYYIWLAAQSPRGEGATTPPIPV  709 (904)
Q Consensus       638 ~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~----~~~~~~~~~~~l~~L~----p~t~Y~v~V~a~~~~G~~~~s~~~~~  709 (904)
                                .+.+.+|.|.|+..+.....    ....+....+.+..+.    ..+.|.|+|.|.|..|.+..+ ...+
T Consensus       124 ----------~~~~~~Y~l~y~~~~~~~~~~C~~~~~~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~-~~~~  192 (314)
T 3bpo_C          124 ----------TSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPS-FNIV  192 (314)
T ss_dssp             ------------CCCCEEEEEEESSCSSCEECCCEEEETTEEEEEEECCC--------CCEEEEEEETTSCSCCE-EEEE
T ss_pred             ----------CCCCccEEEEEEeCCCCccccCcCeecCCCeEEEEECCCCccccceeEEEEEEEEEcCCCceecc-cEEE
Confidence                      23467888887765432211    1122334677777776    378999999999998887544 3555


Q ss_pred             EecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE-----------e-cCcceE
Q psy8771         710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT-----------L-KNQTSF  777 (904)
Q Consensus       710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~-----------~-~~~~~~  777 (904)
                      .+.....+.||.+|++. ...+++.|+|++|.  ..++.+.+|+|+|+..+...+......           . ...+.+
T Consensus       193 ~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~P~--~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~  269 (314)
T 3bpo_C          193 PLTSRVKPDPPHIKNLS-FHNDDLYVQWENPQ--NFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCF  269 (314)
T ss_dssp             CSSSSEECCCCEEEEEE-EETTEEEEEEECCT--TCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEE
T ss_pred             ehhheEeeCCCCEEEEE-EcCCcEEEEEeCCC--ccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEE
Confidence            54444434478999997 67889999999995  345567899999998765433211110           1 256789


Q ss_pred             EecCCCCCceEEEEEEEeeC------CC-CCCCCCcEEeecCC
Q psy8771         778 VLDELKKWTEYRIWVLAGTS------IG-DGPSSYPITIRTHE  813 (904)
Q Consensus       778 ~i~~L~p~t~Y~~~V~a~~~------~g-~g~~s~~~~~~t~~  813 (904)
                      .|.+|+|++.|.|+|+|.+.      .| .|.+|.++.+.+..
T Consensus       270 ~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~  312 (314)
T 3bpo_C          270 MVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR  312 (314)
T ss_dssp             EEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred             EEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence            99999999999999999984      45 47888888876543

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}

Probab=99.88  E-value=1.6e-20  Score=196.63  Aligned_cols=272  Identities=22%  Similarity=0.298  Sum_probs=190.8

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceee---c--ceEEEEeee--cCCeEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV---G--RNVLTLDRV--TESENYTC  173 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~---~--~~~l~i~~l--~d~g~Y~c  173 (904)
                      ..||.|...|.+ +.+.+|++++|.|.+.|.|.+.|.|+|+ +..+.. ..++.+   .  ...|.|.++  +|+|.|+|
T Consensus         2 ~~~P~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C   79 (305)
T 2nzi_A            2 AMAPHFKEELRN-LNVRYQSNATLVCKVTGHPKPIVKWYRQ-GKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV   79 (305)
T ss_dssp             CCCCEEEECCCC-EEECTTCCEEEEEEEECSSCCEEEEEET-TEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEE
T ss_pred             CCCCeeeecccc-eEEeCCCcEEEEEEEeCCCCCeEEEEEC-CEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEE
Confidence            358999999988 9999999999999999999999999999 555543 344443   2  238999999  69999999


Q ss_pred             EEEecCcceEEEEEEEEEeecCCCCCCCC---CCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEE
Q psy8771         174 IAASVLGVIETSTIVKVQCKYAPLLTLPV---APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSE  246 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~---~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~  246 (904)
                      .|.|..|..+..+.|.|....  ....|.   .+..+.+.  ....+.|.+...+.+..  .+.|...+.    ...+..
T Consensus        80 ~a~n~~g~~~~~~~l~V~~~p--~~~~~~~~~~~~~~~~~--~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~  153 (305)
T 2nzi_A           80 RATNQGGSVSGTASLEVEVPA--KIHLPKTLEGMGAVHAL--RGEVVSIKIPFSGKPDP--VITWQKGQDLIDNNGHYQV  153 (305)
T ss_dssp             EEEETTEEEEEEEEEEECEEE--EECCCHHHHSSCCEEEE--TTCCEEEEEEEEEESCC--EEEEEESSSBCCSSSSCEE
T ss_pred             EEEcCCCCccceEEEEEecCC--ccCCCccccccccEEec--CCCEEEEEEEECCCCCC--EEEEEECCEECCCCCcEEE
Confidence            999999998888888887321  111111   11233332  23445555544322222  344443321    122333


Q ss_pred             eecceeceEEEcC-CCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCcee
Q psy8771         247 ISGIITTYYTVRN-LSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI  325 (904)
Q Consensus       247 ~~~~~~~~~~i~~-L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~  325 (904)
                      ........+.|.+ +.+.+.|.|+|.|.|..|....+..                            |            
T Consensus       154 ~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~----------------------------l------------  193 (305)
T 2nzi_A          154 IVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE----------------------------L------------  193 (305)
T ss_dssp             EECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEE----------------------------E------------
T ss_pred             EEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEE----------------------------E------------
Confidence            3333457789999 9999999999999998764210000                            0            


Q ss_pred             eEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccc
Q psy8771         326 TAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLY  405 (904)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (904)
                                                                                                      
T Consensus       194 --------------------------------------------------------------------------------  193 (305)
T 2nzi_A          194 --------------------------------------------------------------------------------  193 (305)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCC
Q psy8771         406 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAP  485 (904)
Q Consensus       406 ~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p  485 (904)
                                                                        .|.                     .+|.+|
T Consensus       194 --------------------------------------------------~v~---------------------~~P~~p  202 (305)
T 2nzi_A          194 --------------------------------------------------DVA---------------------DVPDPP  202 (305)
T ss_dssp             --------------------------------------------------EEE---------------------BCCCCC
T ss_pred             --------------------------------------------------EEe---------------------cCCCCC
Confidence                                                              000                     123567


Q ss_pred             CCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCC
Q psy8771         486 RDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGP  564 (904)
Q Consensus       486 ~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~  564 (904)
                      .++.+.....+++.|+|.+|...++ .+..|.|+++....   ..|..........+.+.+|.+++.|.|+|+|.|..|.
T Consensus       203 ~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~---~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~  279 (305)
T 2nzi_A          203 RGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTA---ERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGL  279 (305)
T ss_dssp             EEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTS---CCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEE
T ss_pred             CCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCC---CccEECccccCceEEecCCCCCCeEEEEEEEEeCCcc
Confidence            7788888888999999998755444 78999999998753   5677666656778999999999999999999999999


Q ss_pred             CCCCCcEEEec
Q psy8771         565 GPLSAPVLVKT  575 (904)
Q Consensus       565 ~~~S~~~~~~t  575 (904)
                      +.+|......+
T Consensus       280 ~~~S~~~~~~~  290 (305)
T 2nzi_A          280 SKPSEPSEPTI  290 (305)
T ss_dssp             CCCCCCCCCEE
T ss_pred             cCCcCCCCCEE
Confidence            98887765433

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=99.88  E-value=4e-21  Score=188.30  Aligned_cols=187  Identities=25%  Similarity=0.341  Sum_probs=150.9

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCc-eeeEEEEEEeCCCCCCcceEEEee-----cCceEEEEcCCCCCCeEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVV-----DNNQLTTISDLTPHTIYT  553 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~-i~~Y~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~L~p~t~Y~  553 (904)
                      .+|.+|.++.+...+. ++.|+|++|...+|. +.+|.|+|+....   ..|.....     ...+.+.+.+|.|++.|.
T Consensus         7 ~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~   82 (209)
T 2vkw_A            7 DTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGE---EVWHSKWYDAKEASMEGIVTIVGLKPETTYA   82 (209)
T ss_dssp             CCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSC---CCCEEEEEEHHHHHHHSEEEECCCCTTCEEE
T ss_pred             CCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCC---CCceEeEeeccCCCccceEEeCCCCCCCeEE
Confidence            3457899999988887 699999998766774 9999999998764   34544433     235589999999999999


Q ss_pred             EEEEEEeCCCCCCCCCcEEEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEee
Q psy8771         554 IRVQAFTSVGPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDI  632 (904)
Q Consensus       554 ~~V~a~~~~g~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~  632 (904)
                      |+|+|.|..|.|.+|....+.|... .|.+|..+.+...+.+++.|+|.++..                           
T Consensus        83 ~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~---------------------------  135 (209)
T 2vkw_A           83 VRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDD---------------------------  135 (209)
T ss_dssp             EEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECCCC---------------------------
T ss_pred             EEEEEEcCCcccCCcccccccccCCCCCCCCcccccccccCCeEEEEEECccc---------------------------
Confidence            9999999999999999888888776 678888888888899999999999854                           


Q ss_pred             ccceEEEeccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEE
Q psy8771         633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVR  710 (904)
Q Consensus       633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~  710 (904)
                                    .++.+.+|.|+|+.. ...+  .........++.|.+|+|++.|.|+|+|+|..|.|.+|....+.
T Consensus       136 --------------~~~~i~~Y~v~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~  200 (209)
T 2vkw_A          136 --------------GGSPIRHYLVRYRAL-SSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRT  200 (209)
T ss_dssp             --------------TTSCCCEEEEEEEET-TSCCCCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred             --------------CCCCCceEEEEEECC-CCCCceeeecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhh
Confidence                          567888999999883 3333  22333455789999999999999999999999999988665554


Q ss_pred             ec
Q psy8771         711 TK  712 (904)
Q Consensus       711 t~  712 (904)
                      +.
T Consensus       201 ~~  202 (209)
T 2vkw_A          201 AA  202 (209)
T ss_dssp             C-
T ss_pred             hh
Confidence            43

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=99.87  E-value=8e-21  Score=187.07  Aligned_cols=189  Identities=22%  Similarity=0.302  Sum_probs=148.3

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-------------cCceEEEEcCCCCC
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-------------DNNQLTTISDLTPH  549 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~L~p~  549 (904)
                      .+|.++.+..++.+++.|+|++|...++.+.+|.|+|+..+..  ..|.....             .....+.+.+|.|+
T Consensus         3 ~pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~   80 (214)
T 2ibg_A            3 YPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKR--KNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ   80 (214)
T ss_dssp             CCCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSS--CCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred             CCCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCC--CcCcccccccCccccccccccCcceeEEecCCcCC
Confidence            4667778888899999999999887778999999999986431  34544321             24567899999999


Q ss_pred             CeEEEEEEEEeCCCCCCCCCc-EEEecCCC----CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCC
Q psy8771         550 TIYTIRVQAFTSVGPGPLSAP-VLVKTQQG----VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP  624 (904)
Q Consensus       550 t~Y~~~V~a~~~~g~~~~S~~-~~~~t~~~----~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p  624 (904)
                      +.|.|+|+|+|..|.+..|.. ..+.+...    .|.+|.++.+...+.+++.|+|.++..                   
T Consensus        81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~-------------------  141 (214)
T 2ibg_A           81 HTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASD-------------------  141 (214)
T ss_dssp             CEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTT-------------------
T ss_pred             CEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCc-------------------
Confidence            999999999999998766652 33443333    345688899888899999999999851                   


Q ss_pred             cceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-cccceEEec--ccceEEEeCCCCCcEEEEEEEEEcCCCCC
Q psy8771         625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KAKHHRRIG--LVETYSLTGLYPNTLYYIWLAAQSPRGEG  701 (904)
Q Consensus       625 ~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~--~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~  701 (904)
                                           ..++.+.+|.|+|+..+. ..+......  ...+++|.+|.|++.|.|+|+|+|..|.|
T Consensus       142 ---------------------~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g  200 (214)
T 2ibg_A          142 ---------------------ADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASAS  200 (214)
T ss_dssp             ---------------------CCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBC
T ss_pred             ---------------------cCCCCcceEEEEEEECCCCcceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccC
Confidence                                 156788999999988776 344333322  35799999999999999999999999999


Q ss_pred             CCCCCeeEEecC
Q psy8771         702 ATTPPIPVRTKQ  713 (904)
Q Consensus       702 ~~s~~~~~~t~~  713 (904)
                      .+|..+.++|.+
T Consensus       201 ~~S~~~~~~T~~  212 (214)
T 2ibg_A          201 EFSALKQGRTQR  212 (214)
T ss_dssp             CCCCCEEEECCC
T ss_pred             CCcceEeeEecC
Confidence            999999998864

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}

Probab=99.87  E-value=1.2e-19  Score=197.22  Aligned_cols=457  Identities=14%  Similarity=0.147  Sum_probs=263.8

Q ss_pred             CCCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      +.|.+|++...+-....|+|++|  .+.-..|.+.+...  .   ........+.+.|..|.+++ +.|.+....+.   
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---   75 (488)
T 2q7n_A            5 DDDKDLKCTTNNMRVWDCTWPAPLGVSPGTVKDICIKDR--F---HSCHPLETTNVKIPALSPGD-HEVTINYLNGF---   75 (488)
T ss_dssp             ----CCCCEESSSSEEEEECCCCSSSCCSCEEEEEEESS--S---EEEEECSSSEEEEECCCSSC-EEEEEEESSSC---
T ss_pred             CCCccceeEecCceEEEEeeeCcCccCCCceEEEEEecC--C---ceeEEeccceeEcccCCCCc-ceEEEeeccCc---
Confidence            35788888888888999999999  33345677776632  1   11222455789999999998 57777754442   


Q ss_pred             CCCCCeEEecCCCCC-CCCCCceEeccc-CCCeeEEEecCCCCC-CceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEE
Q psy8771         280 PPSSPAVITTGETEP-GTAPRDVQVRPL-SSSTMVIQWDEPETP-NGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAA  356 (904)
Q Consensus       280 ~~s~~~~~~t~~~~p-~~~p~~l~~~~~-~~~~v~l~W~~p~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a  356 (904)
                        .....+......+ |.+|.+|.+... ....+.|.|..+... ...+                     ...|.|+|.-
T Consensus        76 --~~~~~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~---------------------~~~~~i~v~~  132 (488)
T 2q7n_A           76 --QSKFTLNEKDVSLIPETPEILDLSADFFTSSLLLKWNDRGSALPHPS---------------------NATWEIKVLQ  132 (488)
T ss_dssp             --EEEEEECSTTCEECCCCCCEEECCEETTTTEEEEEECBCGGGSCSSE---------------------EEEEEEECCC
T ss_pred             --eeEEEEecCccccCCCCCeeEEEEEecCCCeEEEEEeCCCccccccC---------------------CeEEEEEEEE
Confidence              1112222222221 678999988776 478999999876432 1100                     1234444421


Q ss_pred             EcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccC--cEEEEEEeeecCCCCCCCCCCcceEee
Q psy8771         357 QSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPN--TLYYIWLAAQSPRGEGATTPPIPVRTK  434 (904)
Q Consensus       357 ~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~y~~~~~~~~~~g~~~~~~~~~~~~~  434 (904)
                      ....      ..+                         ....+... +...  .....|..                   
T Consensus       133 ~~~~------~~~-------------------------~~~~~~~~-~~~~~~~~~w~w~s-------------------  161 (488)
T 2q7n_A          133 NPRT------EPV-------------------------ALVLLNTM-LSGKDTVQHWNWTS-------------------  161 (488)
T ss_dssp             SSSS------CSC-------------------------CCEECCEE-CSSSCBCCEEEEEC-------------------
T ss_pred             eccc------eEE-------------------------EEEEEEEE-ecCCCceeEeeccC-------------------
Confidence            1000      000                         00000000 0000  01111111                   


Q ss_pred             ccCCCCceeeeeccCCeEEEEEEEEee-------CCCCCCCCCCceeeecCC-CCCCCCCCeEEEecCCceEEEEecCCC
Q psy8771         435 QYGKTPGFGEQALYPNTLYYIWLAAQS-------PRGEGATTPPIPVRTKQY-EPGTAPRDVQVRPLSSSTMVIQWDEPE  506 (904)
Q Consensus       435 ~~~~~~~~~~~~L~p~~~Y~~~v~a~~-------~~g~~~~s~~~~~~t~~~-~p~~~p~~l~v~~~~~~~~~l~W~~p~  506 (904)
                               ...|+ ++.|.++|+...       ....|.+|....+..... .....|.+..+. .+ ..+.|......
T Consensus       162 ---------~~pl~-c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~t~i~v~P~~~~v~-~G-s~vtl~C~a~~  229 (488)
T 2q7n_A          162 ---------DLPLQ-CATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVFPQDKVVL-AG-SNMTICCMSPT  229 (488)
T ss_dssp             ---------SSCCS-SSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCCCCSSCCEECTTCEEE-SS-CCCEEEECCSS
T ss_pred             ---------CCccc-ccceEEEEEEEeccccccCCCCCcCCCChhhcCCcCCCceEECCCCCEEc-CC-CCEEEEEECCC
Confidence                     11233 778999999986       222677777766643211 112235555442 33 46666665531


Q ss_pred             CCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCC--CeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCC
Q psy8771         507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPH--TIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPR  584 (904)
Q Consensus       507 ~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~--t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~  584 (904)
                          +    .|.|...+.....   .........+.|.++...  ..|.+  .+.+ .+.  . ....+. ...+|.+|.
T Consensus       230 ----~----~I~W~~ng~~i~~---~ri~~~~~~L~I~nl~~sd~g~y~~--~C~~-~~~--i-~~~~l~-v~~pP~~P~  291 (488)
T 2q7n_A          230 ----K----VLSGQIGNTLRPL---IHLYGQTVAIHILNIPVSENSGTNI--IFIT-DDD--V-YGTVVF-AGYPPDVPQ  291 (488)
T ss_dssp             ----C----EEEEEETTEECCC---EECSSSCEEEECCSCCCCCSSCEEE--EEEE-SSC--E-EEEEEE-EECCCCCCC
T ss_pred             ----C----EEEEEECCEECch---hhccceEEEEEEeCCCcccCCcEEE--EEEc-CCe--E-EEEEEE-eeCCCCCCc
Confidence                1    4556554421111   112234456788888774  34544  3332 111  1 112222 234778899


Q ss_pred             CceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcc
Q psy8771         585 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK  664 (904)
Q Consensus       585 ~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~  664 (904)
                      ++.+...+...+.++|.++...+-                                      .+..+..|.|.|+..+..
T Consensus       292 nl~C~~~~~~svtcsW~pg~~~~l--------------------------------------~G~~~t~Y~L~y~~~g~~  333 (488)
T 2q7n_A          292 KLSCETHDLKEIICSWNPGRITGL--------------------------------------VGPRNTEYTLFESISGKS  333 (488)
T ss_dssp             SCEEEBSSSSEEEEEECCCSCCCC--------------------------------------CTTSSCEEEEEETTTCCE
T ss_pred             ccEEEEcCCCEEEEEEeCCCcCCC--------------------------------------CCCCceeEEEEEEECCCC
Confidence            999988888999999999865310                                      011244555554432211


Q ss_pred             ccce---EEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCC
Q psy8771         665 AKHH---RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPP  741 (904)
Q Consensus       665 ~~~~---~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~  741 (904)
                      ....   ...+....+.+..+..++.|.|+|.|.|..|.+. + .+.+.+...+++.||.++++...+.+++.|+|++|.
T Consensus       334 ~~c~~~~~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~-S-~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~  411 (488)
T 2q7n_A          334 AVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQ-S-AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPG  411 (488)
T ss_dssp             EEEECSSCCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEE-E-EEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCCccccccCCceEEEEEcCCCCccEEEEEEEEEeCCCCcc-c-eEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCC
Confidence            1000   0012234566655544699999999999998843 4 456666665666689999999889999999999994


Q ss_pred             CCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceE--EecCCCCCceEEEEEEEeeCCCC---CCCCCcEEeecCCC
Q psy8771         742 VERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSF--VLDELKKWTEYRIWVLAGTSIGD---GPSSYPITIRTHED  814 (904)
Q Consensus       742 ~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~--~i~~L~p~t~Y~~~V~a~~~~g~---g~~s~~~~~~t~~~  814 (904)
                        ..++.+..|+|+|+..+...+........ ....+  .|.+|+|++.|.|+|+|.+ .|.   |++|.++.++|.++
T Consensus       412 --~~~g~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~e~  487 (488)
T 2q7n_A          412 --NFTKINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTTEA  487 (488)
T ss_dssp             --ECSSSEEEEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCCCC
T ss_pred             --CCCCcceEEEEEEEECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEECCCC
Confidence              35788999999999876543321111111 23455  9999999999999999999 887   58888888988654

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=99.86  E-value=1.1e-20  Score=183.59  Aligned_cols=185  Identities=21%  Similarity=0.341  Sum_probs=152.6

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~  557 (904)
                      .+|.+|.++.+...+.+++.|+|++|...++ .+.+|.|+|+..+.   ..|.... ....+.+.+.+|.|++.|.|+|+
T Consensus         4 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~   80 (197)
T 3lpw_A            4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTR---KAYSTVATNCHKTSWKVDQLQEGCSYYFRVL   80 (197)
T ss_dssp             CSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTC---SSCEEEEEEECSSEEEECCCCTTCEEEEEEE
T ss_pred             CCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCC---CccEEeecCCCccEEEEcCCCCCCEEEEEEE
Confidence            3457899999999999999999999865555 58999999998763   3454443 35778899999999999999999


Q ss_pred             EEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceE
Q psy8771         558 AFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAV  637 (904)
Q Consensus       558 a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~  637 (904)
                      |.|..|.+.++....+.+....|.+|.++.+...+.+++.|+|.++...                               
T Consensus        81 a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~-------------------------------  129 (197)
T 3lpw_A           81 AENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHD-------------------------------  129 (197)
T ss_dssp             EEETTEECCCEECSSCEESCCCCCCCSCEEEEEECSSCEEEEECCCSCC-------------------------------
T ss_pred             EEcCccccCCCCCccceecCCCCCCCcccEEEeccCCeEEEEecCCCcC-------------------------------
Confidence            9999998887766666777778889999999988999999999987641                               


Q ss_pred             EEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCe
Q psy8771         638 TLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI  707 (904)
Q Consensus       638 ~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~  707 (904)
                               +++.+.+|.|+|+..+...+.........++.+.+|.|++.|.|+|+|+|..|.|.+|...
T Consensus       130 ---------~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s  190 (197)
T 3lpw_A          130 ---------GGSRILGYIVEMQTKGSDKWATCATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLS  190 (197)
T ss_dssp             ---------TTSCCCEEEEEEEETTCSCCEEEEEESSSEEEECCCCTTCEEEEEEEEEETTEECCCEECS
T ss_pred             ---------CCCcccEEEEEEEeCCCCceEEeecccccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCc
Confidence                     2347889999999877666655555667899999999999999999999999998876543

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}

Probab=99.86  E-value=2.4e-20  Score=195.41  Aligned_cols=246  Identities=21%  Similarity=0.321  Sum_probs=182.3

Q ss_pred             CCCCCcEEEeccCCceEEEEeCCCC--------------CCC--ceecccccccccceEEEEeeeccCCeeeeeeeeccC
Q psy8771          35 TAPRDVQVRPLSSSTMVIQWDEPET--------------PNG--QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVAD   98 (904)
Q Consensus        35 ~~p~~l~~~~~~~~s~~v~W~~~~~--------------~~g--~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~   98 (904)
                      +....|.|...+.+...|.|.+...              ++|  .+....+...+.....|...+..+.....+.+.+..
T Consensus        19 G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~   98 (305)
T 2nzi_A           19 QSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEV   98 (305)
T ss_dssp             TCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECE
T ss_pred             CCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEec
Confidence            3667777877778889999976521              122  233333444455555555554433333444555432


Q ss_pred             CCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEee-e--cCCeEE
Q psy8771          99 PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDR-V--TESENY  171 (904)
Q Consensus        99 ~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~-l--~d~g~Y  171 (904)
                      ......|.+...+.. +.+..|+.+.|.|.+.|.|.|.|.|+++ +..+....++.+    ...+|.|.+ +  +|.|.|
T Consensus        99 ~p~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y  176 (305)
T 2nzi_A           99 PAKIHLPKTLEGMGA-VHALRGEVVSIKIPFSGKPDPVITWQKG-QDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFY  176 (305)
T ss_dssp             EEEECCCHHHHSSCC-EEEETTCCEEEEEEEEEESCCEEEEEES-SSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEE
T ss_pred             CCccCCCcccccccc-EEecCCCEEEEEEEECCCCCCEEEEEEC-CEECCCCCcEEEEEcCCceEEEEecCCccCccEEE
Confidence            212222222333345 8889999999999999999999999999 777766655553    456899998 7  699999


Q ss_pred             EEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC----CccceEEEEEEEeCCCCCCeEEe
Q psy8771         172 TCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAANTPYSEI  247 (904)
Q Consensus       172 ~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~----~~~~~~y~v~~~~~~~~~~~~~~  247 (904)
                      +|.|.|..|..+..+.|.|.       ..|.+|.++.+......++.|+|..+    +..+..|.+++++.. ...|...
T Consensus       177 ~C~a~N~~G~~~~~~~l~v~-------~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~-~~~w~~~  248 (305)
T 2nzi_A          177 VVCAKNRFGIDQKTVELDVA-------DVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATT-AERWLRV  248 (305)
T ss_dssp             EEEEEETTEEEEEEEEEEEE-------BCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETT-SCCEEEE
T ss_pred             EEEEEeCCCceeeEEEEEEe-------cCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCC-CCccEEC
Confidence            99999999999999999998       88999999999989999999999986    457889999999874 3455554


Q ss_pred             ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecC
Q psy8771         248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTG  290 (904)
Q Consensus       248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~  290 (904)
                      .......+.|.+|.+++.|.|+|+|.|..|.+.++......+.
T Consensus       249 ~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t  291 (305)
T 2nzi_A          249 GQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTIT  291 (305)
T ss_dssp             EEESSSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEEC
T ss_pred             ccccCceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEc
Confidence            4444688999999999999999999999999988877654443

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=99.86  E-value=1.9e-20  Score=181.81  Aligned_cols=183  Identities=21%  Similarity=0.308  Sum_probs=150.4

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCC-ceeeEEEEEEeCCccccceEE-ecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKAKHHRR-IGLVETYSLTGLYPNTLYYIWLAAQSP  697 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~~~~~~~-~~~~~~~~l~~L~p~t~Y~v~V~a~~~  697 (904)
                      .|.+|.+|++...+.+++.|+|.++...++ .+.+|.|+|+..+...+.... ......+.+.+|.|++.|.|+|+|+|.
T Consensus         5 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~   84 (197)
T 3lpw_A            5 TPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAENE   84 (197)
T ss_dssp             SCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEEEET
T ss_pred             CCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEEEcC
Confidence            578899999999999999999999864444 599999999988766554333 445679999999999999999999999


Q ss_pred             CCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceE
Q psy8771         698 RGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF  777 (904)
Q Consensus       698 ~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~  777 (904)
                      .|.+.++....+.+....|. +|.++.+...+.+++.|+|.+|.. ..++.+.+|.|+|+..+...+  ........+.+
T Consensus        85 ~g~~~~s~~~~~~t~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~-~~~~~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~  160 (197)
T 3lpw_A           85 YGIGLPAETAESVKASERPL-PPGKITLMDVTRNSVSLSWEKPEH-DGGSRILGYIVEMQTKGSDKW--ATCATVKVTEA  160 (197)
T ss_dssp             TEECCCEECSSCEESCCCCC-CCSCEEEEEECSSCEEEEECCCSC-CTTSCCCEEEEEEEETTCSCC--EEEEEESSSEE
T ss_pred             ccccCCCCCccceecCCCCC-CCcccEEEeccCCeEEEEecCCCc-CCCCcccEEEEEEEeCCCCce--EEeecccccEE
Confidence            99988877667777777666 689999998999999999999852 233489999999998765443  21222278899


Q ss_pred             EecCCCCCceEEEEEEEeeCCCCCCCCCc
Q psy8771         778 VLDELKKWTEYRIWVLAGTSIGDGPSSYP  806 (904)
Q Consensus       778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~  806 (904)
                      ++.+|.+++.|.|+|+|.|..|.|++|..
T Consensus       161 ~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~  189 (197)
T 3lpw_A          161 TITGLIQGEEYSFRVSAQNEKGISDPRQL  189 (197)
T ss_dssp             EECCCCTTCEEEEEEEEEETTEECCCEEC
T ss_pred             EeCCcCCCCEEEEEEEEEeCCccCCCccC
Confidence            99999999999999999999999887654

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}

Probab=99.85  E-value=5.3e-20  Score=181.33  Aligned_cols=180  Identities=18%  Similarity=0.309  Sum_probs=147.8

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC--Cceee----cceEEEEeee--cCCeEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD--DKLPV----GRNVLTLDRV--TESENYT  172 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~~----~~~~l~i~~l--~d~g~Y~  172 (904)
                      ...||.|. .|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+...  .++.+    ..+.|.|.++  +|.|.|+
T Consensus        16 ~~~~P~~~-~p~~-~~~~~G~~v~l~C~~~g~p~p~i~W~~~-g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~   92 (215)
T 3mtr_A           16 HMYAPKLQ-GPVA-VYTWEGNQVNITCEVFAYPSATISWFRD-GQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYN   92 (215)
T ss_dssp             CCEEEEEE-CCSE-EEECTTCCEEEEEEEEEESCCEEEEEET-TEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEE
T ss_pred             eecCCccc-CCce-EEEECCCCEEEEEEEeecCCCEEEEEEC-CeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEE
Confidence            46788884 6666 9999999999999999999999999999 6666554  34443    3578999999  6999999


Q ss_pred             EEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC----CccceEEEEEEEeCCCCCCeEEee
Q psy8771         173 CIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAANTPYSEIS  248 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~----~~~~~~y~v~~~~~~~~~~~~~~~  248 (904)
                      |.|.|..|.....+.|.|.       ..|.+|..+.+ .....++.|+|..+    +.++..|.|+|+..+.........
T Consensus        93 C~a~n~~g~~~~~~~l~v~-------~~P~~p~~~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~  164 (215)
T 3mtr_A           93 CTAVNRIGQESLEFILVQA-------DTPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY  164 (215)
T ss_dssp             EEEECSSCEEEEEEEEEEC-------CCCCCCEEEEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEE
T ss_pred             EEEEECCCceEEEEEEEEC-------CCCCCCcceEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccc
Confidence            9999999999999999888       88999988877 46678999999865    557889999999876543332211


Q ss_pred             ----cceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCC
Q psy8771         249 ----GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE  291 (904)
Q Consensus       249 ----~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~  291 (904)
                          ......+.|.+|.+++.|.|+|.|.|..|.+.++..+.+.+.+
T Consensus       165 ~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p  211 (215)
T 3mtr_A          165 DAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP  211 (215)
T ss_dssp             EHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred             ccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence                1223789999999999999999999999999999988887643

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*

Probab=99.85  E-value=2e-19  Score=188.14  Aligned_cols=226  Identities=12%  Similarity=0.126  Sum_probs=150.9

Q ss_pred             eeeeccCCeEEEEEEEEee-CCCCCCCCCCcee--eecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEE
Q psy8771         443 GEQALYPNTLYYIWLAAQS-PRGEGATTPPIPV--RTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYY  519 (904)
Q Consensus       443 ~~~~L~p~~~Y~~~v~a~~-~~g~~~~s~~~~~--~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~  519 (904)
                      .+.+|.++..|.|+|+|.+ ..+.+..+.....  .+....|+.+|.++.+...+.+.+.++|+++.+. +.+.+|.|+|
T Consensus        56 ~~~~~~~~~~y~~~V~a~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~-~~~~~Y~l~y  134 (314)
T 3bpo_C           56 RSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNT-SPDTNYTLYY  134 (314)
T ss_dssp             EEEECCCSSCEEEEEEECC---------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC----CCCCEEEEE
T ss_pred             EEEEEcCCCcEEEEEEEEecCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCC-CCCccEEEEE
Confidence            4567888999999999965 4555555665542  2345567789999999988889999999998754 4578999998


Q ss_pred             EeCCCCCCcceEEE-eecCceEEEEcCCCC----CCeEEEEEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecCC
Q psy8771         520 TQDQSLPMSAWETQ-VVDNNQLTTISDLTP----HTIYTIRVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQE  593 (904)
Q Consensus       520 ~~~~~~~~~~~~~~-~~~~~~~~~~~~L~p----~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~~  593 (904)
                      +..+......+... .......+.+..+.+    .+.|.|+|.|.|..|.+..+ ...+.... ..|.+|.++++. ...
T Consensus       135 ~~~~~~~~~~C~~~~~~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~-~~~~~~~~~v~P~pP~~l~~~-~~~  212 (314)
T 3bpo_C          135 WHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPS-FNIVPLTSRVKPDPPHIKNLS-FHN  212 (314)
T ss_dssp             EESSCSSCEECCCEEEETTEEEEEEECCC--------CCEEEEEEETTSCSCCE-EEEECSSSSEECCCCEEEEEE-EET
T ss_pred             EeCCCCccccCcCeecCCCeEEEEECCCCccccceeEEEEEEEEEcCCCceecc-cEEEehhheEeeCCCCEEEEE-EcC
Confidence            87643221122111 123456678877763    78999999999998877543 34554433 357889999887 677


Q ss_pred             CeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEe--
Q psy8771         594 TAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--  671 (904)
Q Consensus       594 ~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~--  671 (904)
                      +++.|+|.+|..                                         .++.+..|.|+|+..+...+.....  
T Consensus       213 ~~l~lsW~~P~~-----------------------------------------~~~~~l~Yev~y~~~~~~~w~~~~~~~  251 (314)
T 3bpo_C          213 DDLYVQWENPQN-----------------------------------------FISRCLFYEVEVNNSQTETHNVFYVQE  251 (314)
T ss_dssp             TEEEEEEECCTT-----------------------------------------CCGGGEEEEEEEEC--CCCEEEEEESC
T ss_pred             CcEEEEEeCCCc-----------------------------------------cCCceEEEEEEEEECCCCcceEEeccc
Confidence            899999999853                                         2344688999998876655432221  


Q ss_pred             ------------cccceEEEeCCCCCcEEEEEEEEEcC------CC-CCCCCCCeeEEec
Q psy8771         672 ------------GLVETYSLTGLYPNTLYYIWLAAQSP------RG-EGATTPPIPVRTK  712 (904)
Q Consensus       672 ------------~~~~~~~l~~L~p~t~Y~v~V~a~~~------~G-~~~~s~~~~~~t~  712 (904)
                                  .....+.|.+|+|++.|.|+|+|.+.      .| .|.+|..+.+.+.
T Consensus       252 ~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~  311 (314)
T 3bpo_C          252 AKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKK  311 (314)
T ss_dssp             CCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCC
T ss_pred             ccccccccccccCCceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEeccc
Confidence                        34568999999999999999999984      45 3677777766443

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A

Probab=99.84  E-value=1.6e-19  Score=175.41  Aligned_cols=174  Identities=24%  Similarity=0.424  Sum_probs=138.0

Q ss_pred             CCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEE
Q psy8771         577 QGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL  656 (904)
Q Consensus       577 ~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v  656 (904)
                      ..+| +|.++.+...+.+++.|+|.++.                                           ++.+.+|.|
T Consensus        21 ~~~P-~P~~l~~~~~~~~sv~lsW~~p~-------------------------------------------~~~i~~Y~v   56 (203)
T 2gee_A           21 MEVP-QPTDLSFVDITDSSIGLRWTPLN-------------------------------------------SSTIIGYRI   56 (203)
T ss_dssp             SCCC-CCEEEEEECCTTTCEEEEEECCS-------------------------------------------SSSCCEEEE
T ss_pred             ccCc-CCCccEEEecCCCEEEEEecCCC-------------------------------------------CCCccEEEE
Confidence            3455 68888888888888888888873                                           356889999


Q ss_pred             EEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEE
Q psy8771         657 YWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIR  734 (904)
Q Consensus       657 ~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~  734 (904)
                      +|+..+....  ..........+.|.+|.|++.|.|+|+|++..|.+.   ...+.+...+|  +|.++.+...+.+++.
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~---~~~~~t~~~~p--~P~~l~~~~~~~~sv~  131 (203)
T 2gee_A           57 TVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGEST---PTTLTQQTAVP--PPTDLRFTNIGPDTMR  131 (203)
T ss_dssp             EEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEESSSCBCC---CEEEEEECCCC--CCEEEEEEEEETTEEE
T ss_pred             EEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCCccc---cEeeeecCCCc--CCCceEEEEcCCCEEE
Confidence            9988765543  223345677999999999999999999999887654   45566666555  5899999999999999


Q ss_pred             EEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCC
Q psy8771         735 ISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSS  804 (904)
Q Consensus       735 l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s  804 (904)
                      |+|++|.    ++.+.+|.|+|+...+... .....+. ..+.++|.+|+|++.|.|+|+|.+..|.|+++
T Consensus       132 l~W~~p~----~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~  197 (203)
T 2gee_A          132 VTWAPPP----SIDLTNFLVRYSPVKNEED-VAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL  197 (203)
T ss_dssp             EEEECCS----SCCCSEEEEEEEETTCGGG-CEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred             EEEcCCC----CCCccEEEEEEEECCCCCc-cEEEEcCCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCe
Confidence            9999984    4679999999998654322 2334445 88999999999999999999999998887654

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1

Probab=99.84  E-value=9.5e-20  Score=174.69  Aligned_cols=181  Identities=23%  Similarity=0.374  Sum_probs=137.6

Q ss_pred             ccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771         618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP  697 (904)
Q Consensus       618 ~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~  697 (904)
                      ...+.+|.+|++..++.+++.|+|.++   .+.+.+|.|+|+..++............++.|.+|+|++.|.|+|+|++.
T Consensus         4 ~t~p~~P~~l~~~~~~~~sv~l~W~~p---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   80 (186)
T 1qr4_A            4 GTDLDNPKDLEVSDPTETTLSLRWRRP---VAKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKG   80 (186)
T ss_dssp             ----CCCEEEEEESCCSSEEEEEEECC---SSCCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESS
T ss_pred             cCCCcCCCceEEEecCCCEEEEEEeCC---CCCccEEEEEEEeCCCCeeEEECCCCCCEEEECCCCCCCEEEEEEEEEcC
Confidence            346789999999999999999999986   34789999999965433333333445679999999999999999999997


Q ss_pred             CCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-Ccce
Q psy8771         698 RGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTS  776 (904)
Q Consensus       698 ~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~  776 (904)
                      .|.+.+. .+.+.|.   |. +|.++.+...+.+++.|+|++|.     +.+.+|.|+|+..++..  .....+. ..+.
T Consensus        81 ~~~s~~~-~~~~~t~---p~-~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~  148 (186)
T 1qr4_A           81 RHKSKPT-TIKGSTV---VG-SPKGISFSDITENSATVSWTPPR-----SRVDSYRVSYVPITGGT--PNVVTVDGSKTR  148 (186)
T ss_dssp             SCBCCCE-EEEEECC---CC-CCSCEEEESCCSSCEEEEECCCS-----SCCSEEEEEEEETTCCC--CEEEEEETTCCE
T ss_pred             CccCCCE-EEEEECC---CC-CCCccEEEEeCCCEEEEEEECCC-----CcccEEEEEEEeCCCCC--ceEEEcCCCcCE
Confidence            6655432 3444453   33 67899999999999999999883     56999999999876532  2344455 8899


Q ss_pred             EEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       777 ~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      ++|.+|.|++.|.|+|+|.+..|.|... ...++|.++
T Consensus       149 ~~i~~L~p~t~Y~~~V~A~~~~g~s~p~-~~~~~T~pd  185 (186)
T 1qr4_A          149 TKLVKLVPGVDYNVNIISVKGFEESEPI-SGILKTALD  185 (186)
T ss_dssp             EEECSCCSSCEEEEEEEEEETTEECCCE-EEEEEC---
T ss_pred             EEEcCCCCCCEEEEEEEEEcCCCcCcCE-EEEEEecCC
Confidence            9999999999999999999988877643 355667543

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=99.83  E-value=7.5e-20  Score=180.19  Aligned_cols=192  Identities=20%  Similarity=0.257  Sum_probs=144.7

Q ss_pred             CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEE
Q psy8771         579 VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW  658 (904)
Q Consensus       579 ~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~  658 (904)
                      +|.+|.+|.+...+.+++.|+|.++..                                         .+ ...+|.|+|
T Consensus         7 pP~~P~~l~~~~~~~~sv~l~W~~p~~-----------------------------------------~~-~~~~Y~v~~   44 (215)
T 1bqu_A            7 PPEKPKNLSCIVNEGKKMRCEWDGGRE-----------------------------------------TH-LETNFTLKS   44 (215)
T ss_dssp             CCCCCEEEEEEEETTSCCEEEEECCSC-----------------------------------------CS-SCCEEEEEE
T ss_pred             CCCCCEeeEeEECCCCcEEEEcCCCCC-----------------------------------------CC-CCceEEEEE
Confidence            566777777777777778888877753                                         32 347899988


Q ss_pred             EeCCccccce-EEecccceEEEeCC-CCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec--CCCEEE
Q psy8771         659 NDTYAKAKHH-RRIGLVETYSLTGL-YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL--SSTSIR  734 (904)
Q Consensus       659 ~~~~~~~~~~-~~~~~~~~~~l~~L-~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~--~~~~v~  734 (904)
                      +..+...... ........+.|.+| .+++.|.|+|.|.|..|.+. +....+.+....+..+|.++.+...  +.+++.
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~  123 (215)
T 1bqu_A           45 EWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILK  123 (215)
T ss_dssp             EETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEE-CCCEEECGGGSEECCCCEEEEEECC--CCSCEE
T ss_pred             EEcCCCccccccccCCcceEEEcCCccccccEEEEEEEEecccCcc-CCcEEecccccCcCCCCCceEEEEecCCCceEE
Confidence            8764332211 12234579999999 99999999999999999876 4456666555545557899988765  779999


Q ss_pred             EEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEe---c-CcceEEecCCCCCceEEEEEEEeeCCCCCC---CCCcE
Q psy8771         735 ISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL---K-NQTSFVLDELKKWTEYRIWVLAGTSIGDGP---SSYPI  807 (904)
Q Consensus       735 l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~---~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~---~s~~~  807 (904)
                      |+|++|.  ..+|.+.+|+|+|+..+...+  .....   . ..+.++|.+|.+++.|.|+|+|.|..|.|.   +|.++
T Consensus       124 l~W~~p~--~~~~~i~~Y~v~y~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~  199 (215)
T 1bqu_A          124 LTWTNPS--IKSVIILKYNIQYRTKDASTW--SQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEA  199 (215)
T ss_dssp             EEEECCG--GGGTSCEEEEEEEEETTCSSC--EECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCE
T ss_pred             EEEeCCC--CCCcceEEEEEEEccCCCCCc--eEeccccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcc
Confidence            9999985  457789999999998764333  22221   3 678999999999999999999999998865   67788


Q ss_pred             EeecCCCCCC
Q psy8771         808 TIRTHEDDPS  817 (904)
Q Consensus       808 ~~~t~~~~P~  817 (904)
                      .++|.+++|+
T Consensus       200 ~~~T~~~~P~  209 (215)
T 1bqu_A          200 SGITYEDRPS  209 (215)
T ss_dssp             EEEECCCHHH
T ss_pred             cccccccCCc
Confidence            8999887763

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A

Probab=99.83  E-value=3.7e-19  Score=185.49  Aligned_cols=228  Identities=18%  Similarity=0.210  Sum_probs=160.1

Q ss_pred             ceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEe
Q psy8771         538 NQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW  617 (904)
Q Consensus       538 ~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~  617 (904)
                      ...+.|.++... .-.+.+.|.+. |...............+|.+|.++.+...+.+++.|+|.++.+            
T Consensus        64 ~~~L~i~~~~~~-~g~Y~C~a~~~-g~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~------------  129 (303)
T 1i1r_A           64 ASSVTFTDIASL-NIQLTCNILTF-GQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRE------------  129 (303)
T ss_dssp             EEEEEECSCCCS-EEEEEEEEEET-TTEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSC------------
T ss_pred             EEEEEEcCcCCC-ceEEEEecccC-CCcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCC------------
Confidence            346788888764 23344555553 3211111111112234678889999888777899999998864            


Q ss_pred             ccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE-EecccceEEEeCC-CCCcEEEEEEEEE
Q psy8771         618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR-RIGLVETYSLTGL-YPNTLYYIWLAAQ  695 (904)
Q Consensus       618 ~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~l~~L-~p~t~Y~v~V~a~  695 (904)
                                                   . +...+|.|+|+......+... ......++.|.+| .|++.|.|+|.|.
T Consensus       130 -----------------------------~-~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~  179 (303)
T 1i1r_A          130 -----------------------------T-HLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAE  179 (303)
T ss_dssp             -----------------------------C-SSCCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEE
T ss_pred             -----------------------------C-CCCcCEEEEEEecCCCCccCCCcCCCceEEEECCcCcccccEEEEEEEE
Confidence                                         2 235688888876543322111 2234578999999 9999999999999


Q ss_pred             cCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec--CCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEe--
Q psy8771         696 SPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL--  771 (904)
Q Consensus       696 ~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~--~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~--  771 (904)
                      |..|.+.. ....+.+....++.||.++.+...  +.+++.|+|++|.  ..+|.+.+|+|+|+..+...+  .....  
T Consensus       180 N~~G~~~s-~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~y~~~~~~~w--~~~~~~~  254 (303)
T 1i1r_A          180 NALGKVTS-DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPS--IKSVIILKYNIQYRTKDASTW--SQIPPED  254 (303)
T ss_dssp             ETTEEEEC-CCEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCG--GGGTSCEEEEEEEEETTCSSC--EECCGGG
T ss_pred             cCCCCccc-CCEEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCC--CCCcccEEEEEEEEeCCCCCc--eEEcccc
Confidence            99998753 345555554445568888888754  6799999999995  457889999999999864433  22221  


Q ss_pred             -c-CcceEEecCCCCCceEEEEEEEeeCCCCCCC---CCcEEeecCCC
Q psy8771         772 -K-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPS---SYPITIRTHED  814 (904)
Q Consensus       772 -~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~---s~~~~~~t~~~  814 (904)
                       . ..+.+.|.+|.+++.|.|+|+|.|..|.|.+   |+++.++|.++
T Consensus       255 ~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e~  302 (303)
T 1i1r_A          255 TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED  302 (303)
T ss_dssp             GCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCCC
T ss_pred             CCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCcC
Confidence             2 5678999999999999999999999988765   56788888764

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=99.83  E-value=3.6e-20  Score=182.48  Aligned_cols=196  Identities=15%  Similarity=0.206  Sum_probs=150.0

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCC-CCCCeEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDL-TPHTIYTIRVQA  558 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~p~t~Y~~~V~a  558 (904)
                      .||.+|.+|++...+.+++.|+|+++.+.++ ..+|.|+|+...+.. ..+ .......+.+.+.+| .+++.|.|+|+|
T Consensus         6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~-~~~Y~v~~~~~~~~~-~~~-~~~~~~~~~~~i~~L~~~~t~Y~~~V~A   82 (215)
T 1bqu_A            6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKF-ADC-KAKRDTPTSCTVDYSTVYFVNIEVWVEA   82 (215)
T ss_dssp             CCCCCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEEC-CCE-ECCSSCTTEEECSSCCCTTSCEEEEEEE
T ss_pred             CCCCCCEeeEeEECCCCcEEEEcCCCCCCCC-CceEEEEEEEcCCCc-ccc-ccccCCcceEEEcCCccccccEEEEEEE
Confidence            5678999999998888999999999876654 479999998764211 111 112245678999999 999999999999


Q ss_pred             EeCCCCCCCCCcEEEecCC-CCCCCCCCceEEec--CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccc
Q psy8771         559 FTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDI--QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQET  635 (904)
Q Consensus       559 ~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~--~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~  635 (904)
                      .|..|.+. +....+.+.. ..|.+|.++.+...  +.+++.|+|.++..                              
T Consensus        83 ~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~------------------------------  131 (215)
T 1bqu_A           83 ENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSI------------------------------  131 (215)
T ss_dssp             EETTEEEE-CCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGG------------------------------
T ss_pred             EecccCcc-CCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCC------------------------------
Confidence            99999875 5555555433 35678888888765  67899999998864                              


Q ss_pred             eEEEeccCCCCCCCceeeEEEEEEeCCccccceEE----ecccceEEEeCCCCCcEEEEEEEEEcCCCCCC---CCCCee
Q psy8771         636 AVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRR----IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA---TTPPIP  708 (904)
Q Consensus       636 ~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~----~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~---~s~~~~  708 (904)
                                 .++.+.+|.|+|+..+...+....    ......++|.+|.|++.|.|+|+|+|..|.|.   +|..+.
T Consensus       132 -----------~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~  200 (215)
T 1bqu_A          132 -----------KSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEAS  200 (215)
T ss_dssp             -----------GGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEE
T ss_pred             -----------CCcceEEEEEEEccCCCCCceEeccccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccc
Confidence                       456788999999987655443322    34567999999999999999999999988865   667788


Q ss_pred             EEecCCCCCCCC
Q psy8771         709 VRTKQYVPGAPP  720 (904)
Q Consensus       709 ~~t~~~~p~~~P  720 (904)
                      ++|.+.+|..+|
T Consensus       201 ~~T~~~~P~~~p  212 (215)
T 1bqu_A          201 GITYEDRPSKEP  212 (215)
T ss_dssp             EEECCCHHHHHH
T ss_pred             ccccccCCcCCC
Confidence            899887765443

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}

Probab=99.83  E-value=1.1e-19  Score=176.73  Aligned_cols=175  Identities=17%  Similarity=0.282  Sum_probs=136.3

Q ss_pred             CCCcceEEEeec--cceEEEeccCCCCCCCceeeEEEEEEeCCc-cccceE-EecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771         622 AKPRDLRAVDIQ--ETAVTLAWSKPTHSGENIISYELYWNDTYA-KAKHHR-RIGLVETYSLTGLYPNTLYYIWLAAQSP  697 (904)
Q Consensus       622 ~~p~~l~~~~~~--~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~~~~-~~~~~~~~~l~~L~p~t~Y~v~V~a~~~  697 (904)
                      .+|.+|++..++  .+++.|+|.++  .++.+.+|.|+|+..+. ..+... ......++.|.+|+|++.|.|+|+|+|.
T Consensus         1 s~P~~l~v~~v~~~~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~   78 (201)
T 2ha1_A            1 SGPVEVFITETPSQPNSHPIQWNAP--QPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQ   78 (201)
T ss_dssp             CCCCEEECCSCSCCSSCEEEEEECC--SSTTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECT
T ss_pred             CCceeEEEEecCCCCCEEEEEEeCC--CCCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEec
Confidence            368899999988  99999999997  46789999999997654 333333 3345679999999999999999999999


Q ss_pred             CCCCCCCCCeeEEecCC-----------CCCCCC----CCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCC
Q psy8771         698 RGEGATTPPIPVRTKQY-----------VPGAPP----QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRS  762 (904)
Q Consensus       698 ~G~~~~s~~~~~~t~~~-----------~p~~~P----~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~  762 (904)
                      .|.|.++ .+.+.|...           .|..+|    .+|.+...+.+++.|+|++|     ++.+.+|.|+|+.....
T Consensus        79 ~G~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~~~~  152 (201)
T 2ha1_A           79 YGHQEVT-RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA-----SDTVSGFRVEYELSEEG  152 (201)
T ss_dssp             TSCEEEE-EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS-----CTTEEEEEEEEEETTTC
T ss_pred             ccccCce-eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC-----CCCccEEEEEEEECCCC
Confidence            9988654 344544322           133233    56788888999999999988     35799999999976433


Q ss_pred             CCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCC
Q psy8771         763 DSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSY  805 (904)
Q Consensus       763 ~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~  805 (904)
                      .+ .....+. ..+.+.|.+|+|++.|.|+|+|.|..|.|....
T Consensus       153 ~~-~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~s  195 (201)
T 2ha1_A          153 DE-PQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLIL  195 (201)
T ss_dssp             CC-CEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEEE
T ss_pred             Cc-eeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccEe
Confidence            33 2334445 789999999999999999999999999886544

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A

Probab=99.83  E-value=1.2e-18  Score=190.08  Aligned_cols=366  Identities=12%  Similarity=0.169  Sum_probs=219.0

Q ss_pred             CCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCC---CCeEEe--------e--cceeceEEE--cCCCCCCe
Q psy8771         203 APLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAAN---TPYSEI--------S--GIITTYYTV--RNLSPYTE  265 (904)
Q Consensus       203 ~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~---~~~~~~--------~--~~~~~~~~i--~~L~p~~~  265 (904)
                      +|.+|++.......++|.|+++  ......|.+.|+.....   ......        .  ......+.+  ..+.....
T Consensus         5 ~~~~l~C~~~~~~~~~C~W~~~~~~~~~~~~~l~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~   84 (419)
T 2gys_A            5 PLQTLRCYNDYTSHITCRWADTQDAQRLVNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDV   84 (419)
T ss_dssp             HHHHCEEEECSSSEEEEEEEEEHHHHTTCCEEEEEEEETTEEEECCEEECSCCTTSCCCSSSEEEEEEEEECSCCCTTCE
T ss_pred             cCCCceEEeCCCEEEEEEeeCCcCCCCcccEEEEeecCCcCCccceeccccCcccccCCCCCccccEeEeCCcceeeecc
Confidence            4678999888888999999987  22234577777642110   000000        0  001124444  56667789


Q ss_pred             EEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEeeceeEEEEEcCC-
Q psy8771         266 YEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGL-  344 (904)
Q Consensus       266 Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L-  344 (904)
                      |.|+|.|.|..|.     ...+.......+.||.++.+.... ..+.|+|++|......                 ..+ 
T Consensus        85 ~~~~v~~~~~~~~-----~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~-----------------~~~~  141 (419)
T 2gys_A           85 DYFSFQPDRPLGT-----RLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQS-----------------HWLS  141 (419)
T ss_dssp             EEEEEEESSCCCE-----EEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC----------------------CCSC
T ss_pred             cEEEEeCCccccc-----cceEcHHHcccCCCCCceEEEecC-CeEEEEECCCcccccc-----------------chhc
Confidence            9999999776553     234444555567899999998876 6999999988642100                 000 


Q ss_pred             CCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEEEEeeecCCCCCC
Q psy8771         345 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA  424 (904)
Q Consensus       345 ~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~  424 (904)
                      .....|.++.+...  +.  +..                      ..                                 
T Consensus       142 ~~~l~Y~v~yr~~~--~~--w~~----------------------~~---------------------------------  162 (419)
T 2gys_A          142 PGDLEFEVVYKRLQ--DS--WED----------------------AA---------------------------------  162 (419)
T ss_dssp             GGGEEEEEEEEETT--SC--STT----------------------CE---------------------------------
T ss_pred             cCceEEEEEEccCC--CC--hhh----------------------ee---------------------------------
Confidence            12335666655432  10  000                      00                                 


Q ss_pred             CCCCcceEeeccCCCCceeee--eccCCeEEEEEEEEeeCCC------CCCCCCCceeeecCCCCCCCCCCeEEEecCCc
Q psy8771         425 TTPPIPVRTKQYGKTPGFGEQ--ALYPNTLYYIWLAAQSPRG------EGATTPPIPVRTKQYEPGTAPRDVQVRPLSSS  496 (904)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~--~L~p~~~Y~~~v~a~~~~g------~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~  496 (904)
                              . .......+.+.  +|.|++.|.|+|+|.+..|      .|.+|..+.+.+.... +.+|.++.+...+.+
T Consensus       163 --------~-~~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~~~~~  232 (419)
T 2gys_A          163 --------I-LLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFFDGAA  232 (419)
T ss_dssp             --------E-EEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEECSSS
T ss_pred             --------e-ecccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEECCce
Confidence                    0 00011223334  8999999999999999642      3455677788887666 478899999988999


Q ss_pred             eEEEEecCCCCCCCceeeEEEEEEeCCCCC--Ccc-eEE---Eeec--------CceEEEEcCCCCCCeEEEEEEEEeCC
Q psy8771         497 TMVIQWDEPETPNGQITGYKVYYTQDQSLP--MSA-WET---QVVD--------NNQLTTISDLTPHTIYTIRVQAFTSV  562 (904)
Q Consensus       497 ~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~--~~~-~~~---~~~~--------~~~~~~~~~L~p~t~Y~~~V~a~~~~  562 (904)
                      .|.+.|+++....+ ..+|.|+|+......  ... +..   ....        ....+.+.+|.+.+.|.|+|.|.++.
T Consensus       233 ~l~c~W~~~~~~~~-~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~~  311 (419)
T 2gys_A          233 VLSCSWEVRKEVAS-SVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAE  311 (419)
T ss_dssp             EEEEEEEEEHHHHT-TCCEEEEEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCCC
T ss_pred             EEEeEEECCCCCCC-ceeEEEEEEecCccccccCcccccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEEEccCC
Confidence            99999998522112 256999998763210  001 111   1111        11245678889999999999997543


Q ss_pred             CCCCCCCcEEEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEec
Q psy8771         563 GPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAW  641 (904)
Q Consensus       563 g~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w  641 (904)
                      +        .+..... .|.+| .+.+.. ..+.+.|+|.+|...                                   
T Consensus       312 ~--------~~~~~~~v~p~PP-~l~v~~-~~~~l~l~W~~P~~~-----------------------------------  346 (419)
T 2gys_A          312 K--------HIKSSVNIQMAPP-SLQVTK-DGDSYSLRWETMKMR-----------------------------------  346 (419)
T ss_dssp             E--------EEEGGGSBCCCCC-EEEEC----CCCEEEEEC---------------------------------------
T ss_pred             c--------cccceEEEEECCC-CeEEEE-eCCeEEEEECCCccc-----------------------------------
Confidence            3        1211111 24444 466555 467899999988420                                   


Q ss_pred             cCCCCCCCceeeEEEEEEeCCcccc-c-eEEecccceEEEeCCCCCcEEEEEEEEEcCCC--CC---CCCCCeeEEe
Q psy8771         642 SKPTHSGENIISYELYWNDTYAKAK-H-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG--EG---ATTPPIPVRT  711 (904)
Q Consensus       642 ~~~~~~~~~~~~y~v~~~~~~~~~~-~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G--~~---~~s~~~~~~t  711 (904)
                           ....+.+|.|+|+..+.... . .......+.+.|.+|+|++.|.|+|+|.+..|  .|   .+|.++.+.|
T Consensus       347 -----~~~~~l~Yev~y~~~~~~w~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t  418 (419)
T 2gys_A          347 -----YEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT  418 (419)
T ss_dssp             ---------CEEEEEEEECSSSCSTTSCEEEEESCSEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred             -----ccccceEEEEEEEcCCCCcceeeccccccccEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence                 11246799999998764311 1 22223567899999999999999999999863  33   6666666554

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=99.82  E-value=2.8e-19  Score=195.29  Aligned_cols=211  Identities=20%  Similarity=0.251  Sum_probs=153.1

Q ss_pred             EEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCC-------
Q psy8771         455 IWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLP-------  526 (904)
Q Consensus       455 ~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~-------  526 (904)
                      +.+.+.|+.+...........+   .||.+|.++. ..++.+++.|+|++|.+.+| .+.+|.|+|+......       
T Consensus       310 ~~C~C~ng~~ra~~d~~~~~ct---~pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~  385 (536)
T 3fl7_A          310 TSCECEEGFFRAPQDPASMPCT---RPPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCE  385 (536)
T ss_dssp             SSCEECTTCBCCTTCCTTSCCB---CCCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECC
T ss_pred             cEEEEeccccccCCCccccccc---cCCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccC
Confidence            4466777777655433333222   4678999995 47889999999999987777 7999999999743210       


Q ss_pred             -CcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEeCCCC---CCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEe
Q psy8771         527 -MSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFTSVGP---GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWS  601 (904)
Q Consensus       527 -~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~---~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~  601 (904)
                       ...|..... ...+++.+.+|.|++.|.|+|+|.|..|.   +..+..+.+.|..   .+|..+.+...+.+++.|+|.
T Consensus       386 ~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~---~~Ps~~~~~~~s~tSV~LsW~  462 (536)
T 3fl7_A          386 ASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQ---TEPPKVRLEGRSTTSLSVSWS  462 (536)
T ss_dssp             TTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCS---CCCCEEEEEECCC-CCEEEEE
T ss_pred             CCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecc---cCCCCCceeeccCCeEEEEEE
Confidence             011111111 35678999999999999999999999887   3455566666644   445566667778899999999


Q ss_pred             CCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeC
Q psy8771         602 KPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTG  681 (904)
Q Consensus       602 ~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~  681 (904)
                      +|..                                         .++.+.+|.|+|+..+............++++|.+
T Consensus       463 pP~~-----------------------------------------~ng~I~~Y~V~y~~~~~~~~~~~v~~~~ts~~l~g  501 (536)
T 3fl7_A          463 IPPP-----------------------------------------QQSRVWKYEVTYRKKGDSNSYNVRRTEGFSVTLDD  501 (536)
T ss_dssp             CCTT-----------------------------------------TTTTCSEEEEEEEEC--CCCCEEEEESSSEEECCS
T ss_pred             CCcC-----------------------------------------CCCcccEEEEEEEECCCCceEEEEcCCCCEEEECC
Confidence            8865                                         56778888888887765533344456678999999


Q ss_pred             CCCCcEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771         682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ  713 (904)
Q Consensus       682 L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~  713 (904)
                      |+|++.|.|+|+|+|..|.|++|..+.++|..
T Consensus       502 L~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~  533 (536)
T 3fl7_A          502 LAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS  533 (536)
T ss_dssp             CCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred             CCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence            99999999999999999999999999999864

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A

Probab=99.82  E-value=1.4e-18  Score=168.83  Aligned_cols=171  Identities=20%  Similarity=0.342  Sum_probs=135.9

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCC
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVG  563 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g  563 (904)
                      +|.+|.+...+.+++.|+|++|.  ++.+.+|.|+|+..+..... .........+.+.+.+|.|++.|.|+|+|+|..|
T Consensus        25 ~P~~l~~~~~~~~sv~lsW~~p~--~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g  101 (203)
T 2gee_A           25 QPTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGG  101 (203)
T ss_dssp             CCEEEEEECCTTTCEEEEEECCS--SSSCCEEEEEEEESSSSSCC-EEEEEETTCCEEEECSCCTTCEEEEEEEEESSSC
T ss_pred             CCCccEEEecCCCEEEEEecCCC--CCCccEEEEEEEECCCCCCc-eeEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCC
Confidence            78899999999999999999986  35789999999987643211 1223336778899999999999999999999877


Q ss_pred             CCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccC
Q psy8771         564 PGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK  643 (904)
Q Consensus       564 ~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~  643 (904)
                      .+   ....+.+....| +|.++.+...+.+++.|+|.++.                                       
T Consensus       102 ~s---~~~~~~t~~~~p-~P~~l~~~~~~~~sv~l~W~~p~---------------------------------------  138 (203)
T 2gee_A          102 ES---TPTTLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPP---------------------------------------  138 (203)
T ss_dssp             BC---CCEEEEEECCCC-CCEEEEEEEEETTEEEEEEECCS---------------------------------------
T ss_pred             cc---ccEeeeecCCCc-CCCceEEEEcCCCEEEEEEcCCC---------------------------------------
Confidence            64   445566655555 78999999889999999999983                                       


Q ss_pred             CCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCC
Q psy8771         644 PTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATT  704 (904)
Q Consensus       644 ~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s  704 (904)
                          ++.+.+|.|.|+.......  .........++.|.+|+|++.|.|+|+|++..|.|.++
T Consensus       139 ----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~  197 (203)
T 2gee_A          139 ----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL  197 (203)
T ss_dssp             ----SCCCSEEEEEEEETTCGGGCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred             ----CCCccEEEEEEEECCCCCccEEEEcCCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCe
Confidence                3478899999988654432  22334566899999999999999999999999887654

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1

Probab=99.81  E-value=1.6e-18  Score=166.14  Aligned_cols=177  Identities=18%  Similarity=0.254  Sum_probs=134.3

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a  558 (904)
                      .++.+|.+|++...+.+++.|+|++|.   +.+.+|.|+|+..+    ..+.... .....++.+.+|.|++.|.|+|+|
T Consensus         5 t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~----~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a   77 (186)
T 1qr4_A            5 TDLDNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPS----GKKNEMEIPVDSTSFILRGLDAGTEYTISLVA   77 (186)
T ss_dssp             ---CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTT----CCEEEEEECTTCSEEEEESCCSSCEEEEEEEE
T ss_pred             CCCcCCCceEEEecCCCEEEEEEeCCC---CCccEEEEEEEeCC----CCeeEEECCCCCCEEEECCCCCCCEEEEEEEE
Confidence            346889999999999999999999974   47889999999543    2222322 356788999999999999999999


Q ss_pred             EeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEE
Q psy8771         559 FTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVT  638 (904)
Q Consensus       559 ~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~  638 (904)
                      .|..|.+.. ....+.+   .|.+|.++.+...+.+++.|+|.++.                                  
T Consensus        78 ~~~~~~s~~-~~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~----------------------------------  119 (186)
T 1qr4_A           78 EKGRHKSKP-TTIKGST---VVGSPKGISFSDITENSATVSWTPPR----------------------------------  119 (186)
T ss_dssp             ESSSCBCCC-EEEEEEC---CCCCCSCEEEESCCSSCEEEEECCCS----------------------------------
T ss_pred             EcCCccCCC-EEEEEEC---CCCCCCccEEEEeCCCEEEEEEECCC----------------------------------
Confidence            997655432 2233444   46778899999989999999999873                                  


Q ss_pred             EeccCCCCCCCceeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEec
Q psy8771         639 LAWSKPTHSGENIISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK  712 (904)
Q Consensus       639 l~w~~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~  712 (904)
                                +.+.+|.|.|+..+.... .........++.|.+|.|++.|.|+|+|.+..|.|.+. ...+.|.
T Consensus       120 ----------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~-~~~~~T~  183 (186)
T 1qr4_A          120 ----------SRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPI-SGILKTA  183 (186)
T ss_dssp             ----------SCCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEECCCE-EEEEEC-
T ss_pred             ----------CcccEEEEEEEeCCCCCceEEEcCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCE-EEEEEec
Confidence                      358899999988765433 33344566899999999999999999999998877653 3455554

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*

Probab=99.81  E-value=9.2e-19  Score=186.82  Aligned_cols=225  Identities=12%  Similarity=0.051  Sum_probs=125.5

Q ss_pred             eeccCCeEEEEEEEEeeC----CCCCCCCCCceee---ecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEE
Q psy8771         445 QALYPNTLYYIWLAAQSP----RGEGATTPPIPVR---TKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKV  517 (904)
Q Consensus       445 ~~L~p~~~Y~~~v~a~~~----~g~~~~s~~~~~~---t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v  517 (904)
                      .++..+..|.|+|+|.+.    .|.+.+|......   +.+..|+.+|.++.+...+.+.+.++|+++... +...+|.|
T Consensus        93 ~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~p~~~~-~~~~~Y~l  171 (380)
T 3lb6_C           93 DGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGV-LLDTNYNL  171 (380)
T ss_dssp             EECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEECC-------CCEEE
T ss_pred             EeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEcCCCCC-CCCccEEE
Confidence            345558999999999965    5666655544333   344678889999999999999999999997643 55688999


Q ss_pred             EEEeCCCCCCcceEEEee--cCceEEEEc--CCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecC
Q psy8771         518 YYTQDQSLPMSAWETQVV--DNNQLTTIS--DLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQ  592 (904)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~  592 (904)
                      +|+.........|.....  +....+.+.  ++.+.+.|.|+|+|.|..|.+. +....+.+.. ..|.+|.++.+...+
T Consensus       172 ~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~-s~~~~~~~~~~v~p~pP~~l~v~~~~  250 (380)
T 3lb6_C          172 FYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIR-SSYFTFQLQNIVKPLPPVYLTFTRES  250 (380)
T ss_dssp             EEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CC-CEEEEECGGGSCCCCCCEEEEEC---
T ss_pred             EEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeec-cccEEEcHHHcccCCCCceEEEEEcC
Confidence            999765432233322221  233356666  4578899999999999888654 3445666655 357788899998877


Q ss_pred             CCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEec
Q psy8771         593 ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIG  672 (904)
Q Consensus       593 ~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~  672 (904)
                      .+++.|+|.+|...                                        ..+.+.+|+|+|+..+ ..+......
T Consensus       251 ~~~l~l~W~~P~~~----------------------------------------~~~~~l~Yev~y~~~~-~~w~~~~~~  289 (380)
T 3lb6_C          251 SCEIKLKWSIPLGP----------------------------------------IPARCFDYEIEIREDD-TTLVTATVE  289 (380)
T ss_dssp             ----CEEEECCSSS----------------------------------------CCSTTEEEEECC---------CCEES
T ss_pred             CCeEEEEECCCCCC----------------------------------------CCcceEEEEEEEEeCC-CCceEeccc
Confidence            88999999998641                                        1235678888888753 233222222


Q ss_pred             ccceEEEeC-CCCCcEEEEEEEEEcC-----CC-CCCCCCCeeEEecCC
Q psy8771         673 LVETYSLTG-LYPNTLYYIWLAAQSP-----RG-EGATTPPIPVRTKQY  714 (904)
Q Consensus       673 ~~~~~~l~~-L~p~t~Y~v~V~a~~~-----~G-~~~~s~~~~~~t~~~  714 (904)
                        .++.|.+ |+|++.|.|+|+|...     .| .|.+|.++.+.|...
T Consensus       290 --~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~  336 (380)
T 3lb6_C          290 --NETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDL  336 (380)
T ss_dssp             --SSCC------------CCEEEEECTTTCSSCCCCCCCCC--------
T ss_pred             --ceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCC
Confidence              3577888 9999999999999943     23 267788888887654

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A

Probab=99.81  E-value=6.9e-15  Score=171.13  Aligned_cols=533  Identities=12%  Similarity=0.045  Sum_probs=281.8

Q ss_pred             cccccccccceEEEEeeeccCCe-eeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCc
Q psy8771          66 HPPTRAARSHARLAAQSVLRRGR-LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN  144 (904)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~  144 (904)
                      ...+...|.....|...+...+. .....+.|..  ...+|.|...+ . ..+..|+.+.|.|.+.| |.+.|+|+|+ +
T Consensus        75 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~--~~~~p~i~~~~-~-~~v~~g~~v~l~C~~~~-p~~~v~W~~~-g  148 (642)
T 1e07_A           75 IQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYP--ELPKPSISSNN-S-KPVEDKDAVAFTCEPET-QDATYLWWVN-N  148 (642)
T ss_pred             ECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecc--cCCCCcEEccC-c-eeEecCCcEEEEEECCC-CCeeEEEEEC-C
Confidence            33334444444445444433333 3334454432  13456666544 3 67889999999999999 9999999999 7


Q ss_pred             cccCCCCceee--cceEEEEeee--cCCeEEEEEEEecCcce-EEEEEEEEEeecCCCCCCCCC----CcceEEEeecCC
Q psy8771         145 IELTPDDKLPV--GRNVLTLDRV--TESENYTCIAASVLGVI-ETSTIVKVQCKYAPLLTLPVA----PLDVKISEVTAT  215 (904)
Q Consensus       145 ~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~g~~-~~~~~l~v~~~~~~~~~~P~~----p~~l~~~~~~~~  215 (904)
                      ..+..+.++.+  .++.|.|.++  +|+|.|+|.|.|..|.. +..+.|.|.       ..|..    |.+..+  ....
T Consensus       149 ~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~-------~~p~~~~~~~~~~~~--~~G~  219 (642)
T 1e07_A          149 QSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVL-------YGPDAPTISPLNTSY--RSGE  219 (642)
T ss_pred             eECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEE-------eCCCCcEEecCCccc--ccCC
Confidence            77777666654  4678999999  69999999999988863 355677776       22222    222222  2345


Q ss_pred             eEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCC--C
Q psy8771         216 SVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET--E  293 (904)
Q Consensus       216 sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~--~  293 (904)
                      .++|.+...+.+..  .+.|...+..     +  .....+.|.++...+.+.|+|.|.|..|....+....+.....  .
T Consensus       220 ~~~l~C~~~g~p~~--~i~W~~~g~~-----i--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~  290 (642)
T 1e07_A          220 NLNLSCHAASNPPA--QYSWFVNGTF-----Q--QSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPK  290 (642)
T ss_pred             EEEEEEEcCCCCCc--EEEEEECCeE-----c--ccCCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCC
Confidence            67777776533333  3445443211     1  1235699999999999999999999988654333333332211  0


Q ss_pred             CCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEE----------eeceeEEEEEcCCCCCcEEEEEEEEEcCCCCC
Q psy8771         294 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHR----------RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG  363 (904)
Q Consensus       294 p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~----------~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~  363 (904)
                      |...+.+.... .....+.|.+.....+ ..+.++...          .......+.|..+.......+++.+.|..|..
T Consensus       291 p~i~~~~~~~~-~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~  368 (642)
T 1e07_A          291 PFITSNNSNPV-EDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVD  368 (642)
T ss_pred             CEEEcCCceeE-ecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCc
Confidence            10000111111 1123466776654433 234443211          01122467888888888888999999888753


Q ss_pred             CCCCCcceeeccCCCCCCCCcccccccccceeeeEE--EEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCc
Q psy8771         364 ATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETY--SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPG  441 (904)
Q Consensus       364 ~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  441 (904)
                      . +....+.....+..+  ...........+....+  .+.+..+.  -..|...    |            ........
T Consensus       369 ~-s~~~~l~V~~~p~~~--~~~~~~~~~~~g~~~~l~C~~~g~p~~--~i~W~~~----g------------~~~~~~~~  427 (642)
T 1e07_A          369 H-SDPVILNVLYGPDDP--TISPSYTYYRPGVNLSLSCHAASNPPA--QYSWLID----G------------NIQQHTQE  427 (642)
T ss_pred             c-eeeEEEEEEcCCCCC--eecCCceEecCCCcEEEEEEcCccCCC--eEEEEEC----C------------EEcCCCce
Confidence            2 222222221111000  00000000111111111  11121111  1222221    0            01112345


Q ss_pred             eeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeE----EEecCCceEEEEecCCCCCCCceeeEEE
Q psy8771         442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQ----VRPLSSSTMVIQWDEPETPNGQITGYKV  517 (904)
Q Consensus       442 ~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~----v~~~~~~~~~l~W~~p~~~~~~i~~Y~v  517 (904)
                      +.|.++.+.....|+|.|.|..|....+....+....  ++.+|. +.    ........+.|.+.... .     .-.+
T Consensus       428 L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~--~~~~p~-i~~~~~~~v~~g~~v~l~C~~~~-~-----~~~i  498 (642)
T 1e07_A          428 LFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSA--ELPKPS-ISSNNSKPVEDKDAVAFTCEPEA-Q-----NTTY  498 (642)
T ss_pred             EEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEec--cCCCce-EecCCceeecCCCeEEEEEECCC-C-----CcEE
Confidence            7888888888999999999999876655544444332  111221 11    11223457888887641 1     2345


Q ss_pred             EEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCC-CCcEEEecCCCCC-CCCCCceEEecCCCe
Q psy8771         518 YYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPL-SAPVLVKTQQGVP-SQPRDLRAVDIQETA  595 (904)
Q Consensus       518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~-S~~~~~~t~~~~p-~~p~~~~~~~~~~~~  595 (904)
                      .|...+......-......+...+.|.++.......+++.|.|..|.... +..+.+...+..+ ..|.+..+..  ...
T Consensus       499 ~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~--g~~  576 (642)
T 1e07_A          499 LWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLS--GAN  576 (642)
T ss_pred             EEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEc--CCc
Confidence            55554422111111122223456788888887777888889998875322 2233333222111 1223332222  234


Q ss_pred             EEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccc
Q psy8771         596 VTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE  675 (904)
Q Consensus       596 ~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~  675 (904)
                      +.|.......                             ...                 .|.|...+..      .....
T Consensus       577 ~~l~C~~~g~-----------------------------p~p-----------------~v~W~~~g~~------i~~~~  604 (642)
T 1e07_A          577 LNLSCHSASN-----------------------------PSP-----------------QYSWRINGIP------QQHTQ  604 (642)
T ss_pred             EEEEEEeccC-----------------------------CCC-----------------eEEEEECCEE------CccCc
Confidence            4454443211                             111                 2334333211      11224


Q ss_pred             eEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCee
Q psy8771         676 TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIP  708 (904)
Q Consensus       676 ~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~  708 (904)
                      .+.|.++.+...-.+++.|.|..|....+..+.
T Consensus       605 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~  637 (642)
T 1e07_A          605 VLFIAKITPNNNGTYACFVSNLATGRNNSIVKS  637 (642)
T ss_pred             eEEECcccccCCeEEEEEEEecccCcceeEEEE
Confidence            678888888888888999999998765444333

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}

Probab=99.80  E-value=1.2e-18  Score=169.25  Aligned_cols=172  Identities=15%  Similarity=0.303  Sum_probs=125.1

Q ss_pred             CCCCeEEEecC--CceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEe
Q psy8771         484 APRDVQVRPLS--SSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFT  560 (904)
Q Consensus       484 ~p~~l~v~~~~--~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~  560 (904)
                      +|.+|.+..++  .+++.|+|++|  .++.+.+|.|+|+.....  ..|..... ...+++.|.+|.|++.|.|+|+|+|
T Consensus         2 ~P~~l~v~~v~~~~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n   77 (201)
T 2ha1_A            2 GPVEVFITETPSQPNSHPIQWNAP--QPSHISKYILRWRPKNSV--GRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQ   77 (201)
T ss_dssp             CCCEEECCSCSCCSSCEEEEEECC--SSTTCCEEEEEEEETTCS--SCCEEEEECTTCCEEEECSCCTTEEEEEEEEEEC
T ss_pred             CceeEEEEecCCCCCEEEEEEeCC--CCCCceEEEEEEEECCCC--CceEEEecCCCccEEEecCCCCCCEEEEEEEEEe
Confidence            57889998877  99999999998  356899999999976532  33544433 5578899999999999999999999


Q ss_pred             CCCCCCCCCcEEEecCCCC-----------CCC-C----CCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCC
Q psy8771         561 SVGPGPLSAPVLVKTQQGV-----------PSQ-P----RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP  624 (904)
Q Consensus       561 ~~g~~~~S~~~~~~t~~~~-----------p~~-p----~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p  624 (904)
                      ..|.+..+ ...+.|....           |.+ |    .++.+...+.+++.|+|.++                     
T Consensus        78 ~~G~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p---------------------  135 (201)
T 2ha1_A           78 QYGHQEVT-RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA---------------------  135 (201)
T ss_dssp             TTSCEEEE-EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS---------------------
T ss_pred             cccccCce-eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC---------------------
Confidence            99987644 3444443211           111 1    34455555555666666554                     


Q ss_pred             cceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCC
Q psy8771         625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA  702 (904)
Q Consensus       625 ~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~  702 (904)
                                             ++.+.+|.|.|+..+...+  .....+...++.|.+|+|++.|.|+|+|+|..|.|.
T Consensus       136 -----------------------~~~i~~Y~v~~~~~~~~~~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~  192 (201)
T 2ha1_A          136 -----------------------SDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQS  192 (201)
T ss_dssp             -----------------------CTTEEEEEEEEEETTTCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred             -----------------------CCCccEEEEEEEECCCCCceeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcc
Confidence                                   2368999999987543332  223345567999999999999999999999999876


Q ss_pred             CC
Q psy8771         703 TT  704 (904)
Q Consensus       703 ~s  704 (904)
                      +.
T Consensus       193 ~~  194 (201)
T 2ha1_A          193 LI  194 (201)
T ss_dssp             EE
T ss_pred             cE
Confidence            54

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}

Probab=99.80  E-value=1.2e-16  Score=182.53  Aligned_cols=235  Identities=18%  Similarity=0.245  Sum_probs=152.3

Q ss_pred             CCCCCcEEEeccCCceEEEEeCCCCC------------C--CceecccccccccceEEEEeeeccCCeeeeeeeeccCCC
Q psy8771          35 TAPRDVQVRPLSSSTMVIQWDEPETP------------N--GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPV  100 (904)
Q Consensus        35 ~~p~~l~~~~~~~~s~~v~W~~~~~~------------~--g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~  100 (904)
                      +....|.|...+.+.+.|+|.+....            +  +.++.......|...+.|...+..+.......+.+.+  
T Consensus        20 G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~--   97 (570)
T 3b43_A           20 GEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKE--   97 (570)
T ss_dssp             TSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECC--
T ss_pred             CCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEECC--
Confidence            46777888888888999999876322            1  1123333344455555555554433334444454432  


Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ...||.|...+.+ +.+.+|+++.|.|.+.|.|.|.|+|+|+ |..+....++..    ....|.|.++  +|+|.|+|.
T Consensus        98 ~~~~p~~~~~~~~-~~~~~G~~v~l~C~~~g~p~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~  175 (570)
T 3b43_A           98 RKLPPSFARKLKD-VHETLGFPVAFECRINGSEPLQVSWYKD-GELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCS  175 (570)
T ss_dssp             CCCCCEESSCCCC-EEEETTSCEEEEEEEESSSSCEEEEEET-TEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             CCCCCcccccCCC-eEecCCCeEEEEEEEccCCCCEEEEEEC-CEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEE
Confidence            2468899888888 8899999999999999999999999999 777766655432    4568999988  699999999


Q ss_pred             EEecCcceEEEEEEEEEeecC-CCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeec
Q psy8771         175 AASVLGVIETSTIVKVQCKYA-PLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISG  249 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~~~~~-~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~  249 (904)
                      |.|..|....++.|.+..... |.+.  ..|.++.+..  ...++|.+...+.+..  .+.|...+.    ...+.....
T Consensus       176 a~n~~g~~~~~~~l~v~~~~~pp~~~--~~p~~~~v~~--G~~~~l~C~~~g~p~p--~i~W~k~g~~i~~~~~~~~~~~  249 (570)
T 3b43_A          176 ASNPLGTASSSAKLTLSEHEVPPFFD--LKPVSVDLAL--GESGTFKCHVTGTAPI--KITWAKDNREIRPGGNYKMTLV  249 (570)
T ss_dssp             EEETTEEEEEEEEEEEECCCCCCEEE--ECCCCBCCBS--BSCEEEEEEEESSSCC--EEEEEETTEECCTTSSEEEEEE
T ss_pred             EEeCCcEEEEEEEEEEcCCCCCCccc--cCCceeEecC--CCeEEEEEEEEECCCC--EEEEEECCEECcCCCcEEEEEE
Confidence            999999988888888872110 0000  1122222222  2334444443322222  244443321    122222222


Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      .....+.|.++...+.+.|+|.|.|..|..
T Consensus       250 ~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~  279 (570)
T 3b43_A          250 ENTATLTVLKVTKGDAGQYTCYASNVAGKD  279 (570)
T ss_dssp             TTEEEEEESSBCGGGCEEEEEEEEETTEEE
T ss_pred             CCEEEEEEcccCcccCEEEEEEEECCCCcE
Confidence            334679999999999999999999988864

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=99.80  E-value=7.8e-19  Score=191.81  Aligned_cols=185  Identities=23%  Similarity=0.276  Sum_probs=141.1

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCC-ceeeEEEEEEeCCcc-----------ccce-EEecccceEEEeCCCCCc
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAK-----------AKHH-RRIGLVETYSLTGLYPNT  686 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~-----------~~~~-~~~~~~~~~~l~~L~p~t  686 (904)
                      .|.+|.++. ..++.+++.|+|.++...++ .+.+|.|+|+.....           .... .......+++|.+|.|++
T Consensus       333 pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T  411 (536)
T 3fl7_A          333 PPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHM  411 (536)
T ss_dssp             CCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTC
T ss_pred             CCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEeecCCccceeEeCCCCCCC
Confidence            466888885 57899999999999887665 799999999974221           0111 111246789999999999


Q ss_pred             EEEEEEEEEcCCCC---CCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC
Q psy8771         687 LYYIWLAAQSPRGE---GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD  763 (904)
Q Consensus       687 ~Y~v~V~a~~~~G~---~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~  763 (904)
                      .|.|+|+|+|..|.   +..+..+.+.|.+.+    |..+.+...+.+++.|+|++|  +..+|.+.+|.|+|+..+.. 
T Consensus       412 ~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~----Ps~~~~~~~s~tSV~LsW~pP--~~~ng~I~~Y~V~y~~~~~~-  484 (536)
T 3fl7_A          412 NYTFTVEARNGVSGLVTSRSFRTASVSINQTE----PPKVRLEGRSTTSLSVSWSIP--PPQQSRVWKYEVTYRKKGDS-  484 (536)
T ss_dssp             EEEEEEEEECTTGGGCSCCCEEEEEEECCSCC----CCEEEEEECCC-CCEEEEECC--TTTTTTCSEEEEEEEEC--C-
T ss_pred             EEEEEEEEEecCCCCCCCCccceeEEeecccC----CCCCceeeccCCeEEEEEECC--cCCCCcccEEEEEEEECCCC-
Confidence            99999999999887   334555667776554    455666788899999999998  56789999999999987654 


Q ss_pred             CccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         764 SEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       764 ~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      .  ....+. ..++++|.+|+|++.|.|+|+|.|..|.|++|.++.++|.++
T Consensus       485 ~--~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~  534 (536)
T 3fl7_A          485 N--SYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSP  534 (536)
T ss_dssp             C--CCEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC-
T ss_pred             c--eEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCC
Confidence            2  223334 889999999999999999999999999999999999999653

>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}

Probab=99.79  E-value=1.8e-16  Score=181.11  Aligned_cols=172  Identities=17%  Similarity=0.290  Sum_probs=119.0

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..||.|+.++.+ +.+.+|+.+.|.|.+.|.|.|.|+|+|+ +..+....++.+    +.++|.|.++  +|+|.|+|.|
T Consensus         3 ~~pP~f~~~~~~-~~v~~G~~v~L~C~~~g~p~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a   80 (570)
T 3b43_A            3 MEPPYFIEPLEH-VEAAIGEPITLQCKVDGTPEIRIAWYKE-HTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKA   80 (570)
T ss_dssp             CCCCEEEECCCC-EEECTTSCEEEEEEEESSSSCEEEEECS-SSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEE
T ss_pred             CCCCcceEECCc-eEEcCCCEEEEEEEEccCCCCEEEEEEC-CEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEE
Confidence            579999998888 9999999999999999999999999999 777766555543    3468999998  6999999999


Q ss_pred             EecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeecce
Q psy8771         176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISGII  251 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~  251 (904)
                      .|..|.....+.|.|.....+. .....+.++.+  .....+.|.+...+.+..  .|.|..++.    ...........
T Consensus        81 ~N~~g~~~~~~~l~v~~~~~~p-~~~~~~~~~~~--~~G~~v~l~C~~~g~p~~--~v~W~k~g~~l~~~~~~~~~~~~~  155 (570)
T 3b43_A           81 ENSVGAVASSAVLVIKERKLPP-SFARKLKDVHE--TLGFPVAFECRINGSEPL--QVSWYKDGELLKDDANLQTSFIHN  155 (570)
T ss_dssp             EETTEEEEEEEEEEECCCCCCC-EESSCCCCEEE--ETTSCEEEEEEEESSSSC--EEEEEETTEECCCCSSEEEEEETT
T ss_pred             EeCCceEEEEEEEEECCCCCCC-cccccCCCeEe--cCCCeEEEEEEEccCCCC--EEEEEECCEECcCCCCEEEEEECC
Confidence            9999998888888776211000 00012223332  233455666654433222  344444321    11222222223


Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.++...+.+.|+|.|.|..|...
T Consensus       156 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~  184 (570)
T 3b43_A          156 VATLQILQTDQSHVGQYNCSASNPLGTAS  184 (570)
T ss_dssp             EEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred             EEEEEECcCChHHCEEEEEEEEeCCcEEE
Confidence            46799999999999999999999988643

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A

Probab=99.78  E-value=1.4e-14  Score=168.55  Aligned_cols=485  Identities=13%  Similarity=0.088  Sum_probs=263.7

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCC------------CCCceecccccccccceEEEEeeeccCCe-eeeeeeeccCCCCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPET------------PNGQITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQVADPVRR  102 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~------------~~g~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~  102 (904)
                      ....|.|...+ +.+.|.|.+...            +++.++.......+.....|...+..... ...+.+.+.    .
T Consensus       127 ~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~----~  201 (642)
T 1e07_A          127 DAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVL----Y  201 (642)
T ss_pred             CcEEEEEECCC-CCeeEEEEECCeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEE----e
Confidence            34456666655 789999976421            12233333334444444445444433322 223444443    1


Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      .|+.+...|.+ ..+.+|+.+.|.|.+.|.|.+.|+|+|+ |..+.       ....|.|.++  +|+|.|+|.|.|..|
T Consensus       202 ~p~~~~~~~~~-~~~~~G~~~~l~C~~~g~p~~~i~W~~~-g~~i~-------~~~~L~i~~~~~~d~G~Y~C~a~n~~g  272 (642)
T 1e07_A          202 GPDAPTISPLN-TSYRSGENLNLSCHAASNPPAQYSWFVN-GTFQQ-------STQELFIPNITVNNSGSYTCQAHNSDT  272 (642)
T ss_pred             CCCCcEEecCC-cccccCCEEEEEEEcCCCCCcEEEEEEC-CeEcc-------cCCceEEecccccCCeEEEEEEEeCCC
Confidence            22223334555 7789999999999999999999999999 65553       3457999998  699999999999998


Q ss_pred             ceEEEE--EEEEEeecCCCCCCCCCCc----ceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe--EEeeccee
Q psy8771         181 VIETST--IVKVQCKYAPLLTLPVAPL----DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY--SEISGIIT  252 (904)
Q Consensus       181 ~~~~~~--~l~v~~~~~~~~~~P~~p~----~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~  252 (904)
                      ....+.  .|.|.       ..|.+|.    +..+. .....+.|.+...+.+   ..+.|...+.....  ........
T Consensus       273 ~~~~s~~~~v~v~-------~~~~~p~i~~~~~~~~-~~g~~v~l~C~~~~~p---~~v~W~~~g~~l~~~~~~~~~~~~  341 (642)
T 1e07_A          273 GLNRTTVTTITVY-------AEPPKPFITSNNSNPV-EDEDAVALTCEPEIQN---TTYLWWVNNQSLPVSPRLQLSNDN  341 (642)
T ss_pred             ceEEeeeEEEEEE-------ccCCCCEEEcCCceeE-ecCCcEEEEEECCCCC---ccEEEEECCccCCCcCCEEEeCCC
Confidence            765544  44444       2222221    11121 2234688888876544   24555544322110  11111223


Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCC--eEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEE
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP--AVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHH  330 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~--~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~  330 (904)
                      ..+.|.++...+.+.|+|.|.|..|... +..  +.+...+..+...|....+  .....+.|.+.....+...+.++..
T Consensus       342 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-s~~~~l~V~~~p~~~~~~~~~~~~--~~g~~~~l~C~~~g~p~~~i~W~~~  418 (642)
T 1e07_A          342 RTLTLLSVTRNDVGPYECGIQNELSVDH-SDPVILNVLYGPDDPTISPSYTYY--RPGVNLSLSCHAASNPPAQYSWLID  418 (642)
T ss_pred             CEEEEeccCcccCeeEEEEEeCCCCCcc-eeeEEEEEEcCCCCCeecCCceEe--cCCCcEEEEEEcCccCCCeEEEEEC
Confidence            6799999999999999999999988643 222  2332222211112222222  2345677777765555555665542


Q ss_pred             Ee-eceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcE
Q psy8771         331 RR-IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTL  409 (904)
Q Consensus       331 ~~-~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (904)
                      .. ......+.|..+.......+++.|.|..|....+....+........+..... .......+....+......+. .
T Consensus       419 g~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~-~~~~v~~g~~v~l~C~~~~~~-~  496 (642)
T 1e07_A          419 GNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSN-NSKPVEDKDAVAFTCEPEAQN-T  496 (642)
T ss_pred             CEEcCCCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecC-CceeecCCCeEEEEEECCCCC-c
Confidence            22 22344688889999999999999999988766554444433221111111100 000111222222222221121 1


Q ss_pred             EEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCC-CCCceeeecCCCCCCCCCCe
Q psy8771         410 YYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGAT-TPPIPVRTKQYEPGTAPRDV  488 (904)
Q Consensus       410 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~-s~~~~~~t~~~~p~~~p~~l  488 (904)
                      -..|....    .......   +.........+.|.++.......|+|.|.|..|.... +..+.+...+..+...|.+.
T Consensus       497 ~i~W~~~g----~~l~~~~---~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~  569 (642)
T 1e07_A          497 TYLWWVNG----QSLPVSP---RLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDS  569 (642)
T ss_pred             EEEEEECC----EeCCCCC---cEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCce
Confidence            22232211    1000000   0011112346788899888888999999999886432 12233332221222233444


Q ss_pred             EEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCC
Q psy8771         489 QVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLS  568 (904)
Q Consensus       489 ~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S  568 (904)
                      .+.  ....+.|.......+   .  -.|.|...+..         ......+.|..+.+...-.+++.|.|..|....+
T Consensus       570 ~v~--~g~~~~l~C~~~g~p---~--p~v~W~~~g~~---------i~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s  633 (642)
T 1e07_A          570 SYL--SGANLNLSCHSASNP---S--PQYSWRINGIP---------QQHTQVLFIAKITPNNNGTYACFVSNLATGRNNS  633 (642)
T ss_pred             eEE--cCCcEEEEEEeccCC---C--CeEEEEECCEE---------CccCceEEECcccccCCeEEEEEEEecccCccee
Confidence            332  234566666642111   1  14666665411         1123457888888888888999999999875555


Q ss_pred             CcEEE
Q psy8771         569 APVLV  573 (904)
Q Consensus       569 ~~~~~  573 (904)
                      ..+.+
T Consensus       634 ~~l~V  638 (642)
T 1e07_A          634 IVKSI  638 (642)
T ss_pred             EEEEE
Confidence            44443

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}

Probab=99.77  E-value=2.8e-17  Score=176.75  Aligned_cols=430  Identities=14%  Similarity=0.157  Sum_probs=242.9

Q ss_pred             eEEEeecCCeEEEEEeCCC--ccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCC
Q psy8771         207 VKISEVTATSVRLDWTYPS--ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP  284 (904)
Q Consensus       207 l~~~~~~~~sv~l~W~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~  284 (904)
                      |.+..-+-..+.|+|+++.  ..-..|.+.+...  .   ........+.+.|..|.+++ +.+.|-.....|...+.- 
T Consensus         2 ~~c~~~~~~~~~c~w~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-   74 (483)
T 3e0g_A            2 LKCVTNNLQVWQCSWKAPSGTGRGTDYEVCIEQR--S---RSCYQLEKTSIKIPALSHGD-YEITINSLHDFGSSTSKF-   74 (483)
T ss_dssp             CCEEBSSTTEEEEBCCCCSSSCSSCCEEEEECSS--S---CEEEEESSSBCCEECCSSSC-CCEEEECSSCC----CCC-
T ss_pred             ceeEeccceEEEEeccCCCCCCCCceEEEEEeCC--c---ccchhhhccceEeecCCccc-eEEEEcccCCCCCCceeE-
Confidence            3344444567899999982  2345688886541  1   11222244678999999998 677776666655443332 


Q ss_pred             eEEecCCC-CCCCCCCceEecccCC-CeeEEEecCCCCCC---ceeeEEE-EEe---------------e-cee--E--E
Q psy8771         285 AVITTGET-EPGTAPRDVQVRPLSS-STMVIQWDEPETPN---GQITAKH-HRR---------------I-GLV--E--T  338 (904)
Q Consensus       285 ~~~~t~~~-~p~~~p~~l~~~~~~~-~~v~l~W~~p~~~~---~~~~~~~-~~~---------------~-~~~--~--~  338 (904)
                       .+..... ..|.+|..+.+..... .++.|.|.......   ..+.+.. +.+               . ...  .  +
T Consensus        75 -~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~i~i~r~~~~~~v~~~~~~~~~~~~~~~~~w~  153 (483)
T 3e0g_A           75 -TLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWS  153 (483)
T ss_dssp             -EECCSCCEECCCCCCBCCCEEETTTTEEEEEEEECGGGCCSCCEEEEEEEEESSSSCEEEEEEEEEECGGGCCEEEEEE
T ss_pred             -EEEcccceeccCCCceEEEEecCCCcEEEEEEeCCCCCCCcccceEEEEEEEEcCCccEEEEEEEEEEecCCCceEEEE
Confidence             2211111 2346778888877655 88999998653321   1111110 000               0 001  0  1


Q ss_pred             EEEcCCCCCcEEEEEEEEE-cC---CCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEEEE
Q psy8771         339 YSLTGLYPNTLYYIWLAAQ-SP---RGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWL  414 (904)
Q Consensus       339 ~~~~~L~~~~~Y~v~v~a~-~~---~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~  414 (904)
                      .+-.--.+++.|.+++++. ++   .|.+.+|......+....................|.             ...+.+
T Consensus       154 w~s~~plec~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~~~~~ifP~~~vv~~GS-------------~vt~~C  220 (483)
T 3e0g_A          154 WASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDSQTKVFPQDKVILVGS-------------DITFCC  220 (483)
T ss_dssp             EECSSCTTSSCEEEEEEEEEECTTCCSEECCCCCCCCEEECCCCCSSCCEESCSEEEETTC-------------CEEEEE
T ss_pred             ecCCCCCCCCccEEEEEEEecccccCCCCCCcCCCChhhccccCCCCcEEeccCCEEeCCC-------------CEEEEE
Confidence            2223345799999999998 33   343334444433333111111110000111111222             112222


Q ss_pred             eeecCC-CCCCCCCCcceEeeccCCCCceeeeeccC----CeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeE
Q psy8771         415 AAQSPR-GEGATTPPIPVRTKQYGKTPGFGEQALYP----NTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQ  489 (904)
Q Consensus       415 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~L~p----~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~  489 (904)
                      ...... +......... .....+....+++.+|..    |+.|.+..    . + ....  ..+..  ..||.+|.++.
T Consensus       221 i~~~~~~~~~l~~~~~~-~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~----~-~-~~~g--~~l~v--g~PP~~P~nls  289 (483)
T 3e0g_A          221 VSQEKVLSALIGHTNCP-LIHLDGENVAIKIRNISVSASSGTNVVFTT----E-D-NIFG--TVIFA--GYPPDTPQQLN  289 (483)
T ss_dssp             CCSSCEEEEESSSCCBC-CEECSSSCEEEEECSCCCCCSSCEEEEEEE----S-S-CEEE--EEEEE--ECCCCCCEEEE
T ss_pred             EeCccccceecCcccce-eEEecCCEEEEEEeCCCCccCccceEEEec----C-C-cccc--eEEEC--cCCCCCCCccE
Confidence            111000 0000000000 011233455566666644    45565542    1 1 1111  11222  25778999999


Q ss_pred             EEecCCceEEEEecCCCCCC--C-ceeeEEEEEEeCCCCCCcceEEEe--ecCceEEEEcCCCCCCeEEEEEEEEeCCCC
Q psy8771         490 VRPLSSSTMVIQWDEPETPN--G-QITGYKVYYTQDQSLPMSAWETQV--VDNNQLTTISDLTPHTIYTIRVQAFTSVGP  564 (904)
Q Consensus       490 v~~~~~~~~~l~W~~p~~~~--~-~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~  564 (904)
                      ....+.+++.++|+++.+.+  | ....|.|.|+..+.  ...+....  .+....+.+.+|.+.+.|.|+|.|.|..|.
T Consensus       290 C~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~--~~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~  367 (483)
T 3e0g_A          290 CETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGK--YVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGR  367 (483)
T ss_dssp             EEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCC--EEEECCCSSCSCSCEEEEEECCTTCCCEEEEEEEECSSCE
T ss_pred             EEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCC--CccccCCcccCCCEEEEEEccCCCCcEEEEEEEEEeCCCC
Confidence            98888889999999976543  3 37899999975431  11111100  123457899999999999999999999987


Q ss_pred             CCCCCcEEEec-CCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccC
Q psy8771         565 GPLSAPVLVKT-QQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK  643 (904)
Q Consensus       565 ~~~S~~~~~~t-~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~  643 (904)
                      +. |. ..+.. ....|.+|.++.+...+.+.+.|+|.+|..                                      
T Consensus       368 ~~-S~-~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~--------------------------------------  407 (483)
T 3e0g_A          368 SQ-ST-ILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGN--------------------------------------  407 (483)
T ss_dssp             EE-EE-EEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCSC--------------------------------------
T ss_pred             cc-cc-eEEEeccccCCCCCeeeEEEEecCCeEEEEECCCCC--------------------------------------
Confidence            65 33 44442 234678899999988888899999999854                                      


Q ss_pred             CCCCCCceeeEEEEEEeCCccc-cceEEec----ccceEEEeCCCCCcEEEEEEEEEcCCCC---CCCCCCeeEEecCC
Q psy8771         644 PTHSGENIISYELYWNDTYAKA-KHHRRIG----LVETYSLTGLYPNTLYYIWLAAQSPRGE---GATTPPIPVRTKQY  714 (904)
Q Consensus       644 ~~~~~~~~~~y~v~~~~~~~~~-~~~~~~~----~~~~~~l~~L~p~t~Y~v~V~a~~~~G~---~~~s~~~~~~t~~~  714 (904)
                         .++....|+|+|+..+... +......    ....+.|.+|+|++.|.|+|+|. ..|.   |++|.+..+.|.++
T Consensus       408 ---~~~~~L~YeVrYr~~~~~~~~~~vsv~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~E~  482 (483)
T 3e0g_A          408 ---FAKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTTEA  482 (483)
T ss_dssp             ---CTTSBCCCEEEEECSSSCCCEEECCCBCCSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCCCC
T ss_pred             ---CCCceEEEEEEEEECCCCCceEEEEEeccCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECCCC
Confidence               3445788999998876543 2211111    22367899999999999999999 6676   67788888888654

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A

Probab=99.77  E-value=2.1e-17  Score=161.59  Aligned_cols=192  Identities=18%  Similarity=0.231  Sum_probs=140.9

Q ss_pred             CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEE
Q psy8771         579 VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW  658 (904)
Q Consensus       579 ~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~  658 (904)
                      +|.+|.++.+...+..++.++|.++.+                                         .+ ....|.|.|
T Consensus         3 pP~~P~nl~c~~~~~~~~~c~W~p~~~-----------------------------------------~~-~~~~Y~l~y   40 (210)
T 3n06_B            3 PPGKPEIFKCRSPNKETFTCWWRPGTD-----------------------------------------GG-LPTNYSLTY   40 (210)
T ss_dssp             CCCCCEEEEEEBSSSSCEEEEEECCSS-----------------------------------------SC-CCSEEEEEE
T ss_pred             CCCCCeEeEEEeCCCCeEEEEECCCCC-----------------------------------------CC-CCceEEEEE
Confidence            567788888877777888888887653                                         22 246888888


Q ss_pred             EeCCccccceEE---ecccceEEE--eCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecC----
Q psy8771         659 NDTYAKAKHHRR---IGLVETYSL--TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLS----  729 (904)
Q Consensus       659 ~~~~~~~~~~~~---~~~~~~~~l--~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~----  729 (904)
                      +......+....   ......+.+  .+|.+.+.|.|+|.|.|..|.+. +..+.+.+....+..||.++.+....    
T Consensus        41 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V~A~N~~G~~~-s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~  119 (210)
T 3n06_B           41 HREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQMGSSF-SDELYVDVTYIVQPDPPLELAVEVKQPEDR  119 (210)
T ss_dssp             EETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEEEEEETTEEEE-CCCEEECGGGCBCCCCCEEEEEEEECCSSS
T ss_pred             EECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEEEEEcCCCCee-CCcEEEchhheEecCCCceEEEEEecCcCC
Confidence            876543332111   112334544  67999999999999999998874 45666766666666689999887653    


Q ss_pred             CCEEEEEecCCCCCCC-Cc-cEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCCC-CCCCCc
Q psy8771         730 STSIRISWEPPPVERS-NG-HIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGD-GPSSYP  806 (904)
Q Consensus       730 ~~~v~l~W~~~~~~~~-~g-~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~-g~~s~~  806 (904)
                      .+++.|+|++|..... +| .+.+|+|+|+..++..+  ........+.+.|.+|.+++.|.|+|+|.+..|. |++|.+
T Consensus       120 ~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~  197 (210)
T 3n06_B          120 KPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEW--EIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPA  197 (210)
T ss_dssp             CCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSC--EEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCC
T ss_pred             CceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCC--EEEeccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCc
Confidence            5899999999864321 24 46899999998765443  2222226789999999999999999999999886 999999


Q ss_pred             EEeecCCCC
Q psy8771         807 ITIRTHEDD  815 (904)
Q Consensus       807 ~~~~t~~~~  815 (904)
                      +.++|+.+.
T Consensus       198 ~~~~Tp~~~  206 (210)
T 3n06_B          198 TFIQIPSDF  206 (210)
T ss_dssp             EEEECCTTC
T ss_pred             eeEECcCCC
Confidence            999996653

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A

Probab=99.76  E-value=4.2e-17  Score=159.41  Aligned_cols=192  Identities=17%  Similarity=0.205  Sum_probs=144.9

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee---cCceEEEE--cCCCCCCeEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV---DNNQLTTI--SDLTPHTIYTI  554 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~L~p~t~Y~~  554 (904)
                      .||.+|.++++...+.++|.++|+++.+.+. ...|.|+|+....   ..|.....   .....+.+  .+|.+.+.|.|
T Consensus         2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~~-~~~Y~l~y~~~~~---~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~   77 (210)
T 3n06_B            2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGGL-PTNYSLTYHREGE---TLMHECPDYITGGPNSCHFGKQYTSMWRTYIM   77 (210)
T ss_dssp             CCCCCCEEEEEEBSSSSCEEEEEECCSSSCC-CSEEEEEEEETTC---CCCEECSCSSTTCTTEEEECGGGCCSSSCEEE
T ss_pred             CCCCCCeEeEEEeCCCCeEEEEECCCCCCCC-CceEEEEEEECCC---CccccCCCCCCCCCeEEEeCCCCcccceeEEE
Confidence            4678999999999999999999999775443 4799999997653   23443321   22344554  57999999999


Q ss_pred             EEEEEeCCCCCCCCCcEEEecCCC-CCCCCCCceEEecC----CCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEE
Q psy8771         555 RVQAFTSVGPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQ----ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRA  629 (904)
Q Consensus       555 ~V~a~~~~g~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~----~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~  629 (904)
                      +|+|.|..|.+ .|....+.+... .|.+|.++.+....    .+++.|+|.++...+                      
T Consensus        78 ~V~A~N~~G~~-~s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~----------------------  134 (210)
T 3n06_B           78 MVNATNQMGSS-FSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLID----------------------  134 (210)
T ss_dssp             EEEEEETTEEE-ECCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCC----------------------
T ss_pred             EEEEEcCCCCe-eCCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCcc----------------------
Confidence            99999999977 355566655443 46788888887653    578999999885410                      


Q ss_pred             EeeccceEEEeccCCCCCCC-ceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCC-CCCCCCe
Q psy8771         630 VDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE-GATTPPI  707 (904)
Q Consensus       630 ~~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~-~~~s~~~  707 (904)
                                      ..++ ...+|.|+|+..+...+..........+.|.+|.|++.|.|+|+|.+..|. |.+|..+
T Consensus       135 ----------------~~~g~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~  198 (210)
T 3n06_B          135 ----------------LKTGWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPAT  198 (210)
T ss_dssp             ----------------CTTSSCCEEEEEEEECTTCSSCEEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCE
T ss_pred             ----------------ccCCeEEEEEEEEEecCCCCCCEEEeccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCce
Confidence                            0112 368999999987765554444455679999999999999999999999887 8999999


Q ss_pred             eEEecCC
Q psy8771         708 PVRTKQY  714 (904)
Q Consensus       708 ~~~t~~~  714 (904)
                      .+.|...
T Consensus       199 ~~~Tp~~  205 (210)
T 3n06_B          199 FIQIPSD  205 (210)
T ss_dssp             EEECCTT
T ss_pred             eEECcCC
Confidence            9999655

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=99.76  E-value=3.3e-17  Score=171.47  Aligned_cols=230  Identities=16%  Similarity=0.161  Sum_probs=154.0

Q ss_pred             eEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecC-CCeEEEEEeCCCCCCCCceEEEEEe
Q psy8771         539 QLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQ-ETAVTLAWSKPTHSGENIISYELYW  617 (904)
Q Consensus       539 ~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~-~~~~~l~W~~~~~~~~~~~~y~v~~  617 (904)
                      ..+.|.++.......+.+.+.+  |.+..+....+.. ..+|.+|.++.+...+ .+++.++|.++.+            
T Consensus        61 ~~L~i~~~~~~d~g~y~c~~~~--~~~~~~~~~~l~v-~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~------------  125 (313)
T 2d9q_B           61 SIITLPHLNHTQAFLSCSLNWG--NSLQILDQVELRA-GYPPAIPHNLSCLMNLTTSSLICQWEPGPE------------  125 (313)
T ss_dssp             EEEEESCCCSSEEEEEEEEESS--SSEEEEEEEEEEE-CCCCCCCEEEEEEEETTTTEEEEEEECCSC------------
T ss_pred             EEEEEeccCCCccceEEeeecC--CCceeEEEEEEcc-CCCCCCCccceeeECCCCccEEEEecCCCC------------
Confidence            5688999988766666666643  2222121222222 3467789999888774 6899999998864            


Q ss_pred             ccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc------cceEE-ecccceEEE--eCCCCCcEE
Q psy8771         618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA------KHHRR-IGLVETYSL--TGLYPNTLY  688 (904)
Q Consensus       618 ~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~------~~~~~-~~~~~~~~l--~~L~p~t~Y  688 (904)
                                                   .+ ....|.|+|+......      +.... ......+.+  .+|.+++.|
T Consensus       126 -----------------------------~~-~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y  175 (313)
T 2d9q_B          126 -----------------------------TH-LPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNM  175 (313)
T ss_dssp             -----------------------------CS-SCCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEEEEEGGGCCSSSCE
T ss_pred             -----------------------------CC-CceeEEEEEEecCCCcccCCcccccCCCCCCCcEEEECccccccceeE
Confidence                                         22 2345778777653211      11111 122345555  459999999


Q ss_pred             EEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec------CCCEEEEEecCCCCCCCCccEEEEEEEEE-EccC
Q psy8771         689 YIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL------SSTSIRISWEPPPVERSNGHIVYYKLQFV-ETGR  761 (904)
Q Consensus       689 ~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~------~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~-~~~~  761 (904)
                      .|+|.|.|..|.+. +..+.+.+....++.||.++.+...      ..+++.|+|++|.  ..++.+.+|+|+|+ ..+.
T Consensus       176 ~f~V~A~N~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~--~~~~~~l~Y~v~y~~~~~~  252 (313)
T 2d9q_B          176 GIWVQAENALGTSM-SPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQ--PGLHINQKCELRHKPQRGE  252 (313)
T ss_dssp             EEEEEEEETTEEEE-CCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCG--GGTTSCEEEEEEEEESSSC
T ss_pred             EEEEEEECCCCCcc-CccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCC--CCCceeEEEEEEEccCCCC
Confidence            99999999999863 4456676666555568888888765      4689999999984  23344589999999 4444


Q ss_pred             CCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCC---CCCcEEeecCCCCCC
Q psy8771         762 SDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGP---SSYPITIRTHEDDPS  817 (904)
Q Consensus       762 ~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~---~s~~~~~~t~~~~P~  817 (904)
                      ..|... .... ..+.+.|.+|.|++.|.|+|+|.|..|.|.   +|.++.++|.+++|+
T Consensus       253 ~~w~~~-~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P~  311 (313)
T 2d9q_B          253 ASWALV-GPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAAA  311 (313)
T ss_dssp             CCCEEE-EEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC----
T ss_pred             CCcEEc-ccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCCC
Confidence            334211 1223 667899999999999999999999977764   778899999988874

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}

Probab=99.75  E-value=6.6e-17  Score=173.91  Aligned_cols=366  Identities=15%  Similarity=0.175  Sum_probs=219.5

Q ss_pred             CCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCC-CCCCCCCCeEEEecCC-ceEEEEecCCCC--CCCceee
Q psy8771         439 TPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY-EPGTAPRDVQVRPLSS-STMVIQWDEPET--PNGQITG  514 (904)
Q Consensus       439 ~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~-~p~~~p~~l~v~~~~~-~~~~l~W~~p~~--~~~~i~~  514 (904)
                      .+.+.|..|.++. +++.|....+.|......  .+.-... .-|.+|..|.+..... ..+.|+|.....  +......
T Consensus        44 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~~~~~  120 (483)
T 3e0g_A           44 KTSIKIPALSHGD-YEITINSLHDFGSSTSKF--TLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVI  120 (483)
T ss_dssp             SSBCCEECCSSSC-CCEEEECSSCC----CCC--EECCSCCEECCCCCCBCCCEEETTTTEEEEEEEECGGGCCSCCEEE
T ss_pred             ccceEeecCCccc-eEEEEcccCCCCCCceeE--EEEcccceeccCCCceEEEEecCCCcEEEEEEeCCCCCCCcccceE
Confidence            4567899999998 777776655554433222  2211111 2345778888777665 799999987421  1123567


Q ss_pred             EEEEEEeCCCCCCcceEEEee----cCceEE----EEcCCCCCCeEEEEEEEE-eC---CCC---CCCCCcEEEecCCC-
Q psy8771         515 YKVYYTQDQSLPMSAWETQVV----DNNQLT----TISDLTPHTIYTIRVQAF-TS---VGP---GPLSAPVLVKTQQG-  578 (904)
Q Consensus       515 Y~v~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~L~p~t~Y~~~V~a~-~~---~g~---~~~S~~~~~~t~~~-  578 (904)
                      |.|+........ -.|.....    .....+    +-+--.+++.|.++||+. +.   .|.   +.||....+..... 
T Consensus       121 ~~i~i~r~~~~~-~v~~~~~~~~~~~~~~~~~w~w~s~~plec~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~~  199 (483)
T 3e0g_A          121 WEIKVLRKESME-LVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDS  199 (483)
T ss_dssp             EEEEEESSSSCE-EEEEEEEEECGGGCCEEEEEEEECSSCTTSSCEEEEEEEEEECTTCCSEECCCCCCCCEEECCCCCS
T ss_pred             EEEEEEEcCCcc-EEEEEEEEEEecCCCceEEEEecCCCCCCCCccEEEEEEEecccccCCCCCCcCCCChhhccccCCC
Confidence            888888765321 11221111    111111    122234789999999998 22   444   34444434422111 


Q ss_pred             CCC-CCCC--------ceEEec--------------------CCCeEEEEEeCCCCC-----------CCCceEEEEEec
Q psy8771         579 VPS-QPRD--------LRAVDI--------------------QETAVTLAWSKPTHS-----------GENIISYELYWN  618 (904)
Q Consensus       579 ~p~-~p~~--------~~~~~~--------------------~~~~~~l~W~~~~~~-----------~~~~~~y~v~~~  618 (904)
                      .+. -|.+        +.+.-+                    +.....+.-......           .+.+.+-.|...
T Consensus       200 ~~~ifP~~~vv~~GS~vt~~Ci~~~~~~~~~l~~~~~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~~~~~g~~l~vg  279 (483)
T 3e0g_A          200 QTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTTEDNIFGTVIFAG  279 (483)
T ss_dssp             SCCEESCSEEEETTCCEEEEECCSSCEEEEESSSCCBCCEECSSSCEEEEECSCCCCCSSCEEEEEEESSCEEEEEEEEE
T ss_pred             CcEEeccCCEEeCCCCEEEEEEeCccccceecCcccceeEEecCCEEEEEEeCCCCccCccceEEEecCCcccceEEECc
Confidence            000 1111        111111                    111111111100000           011222233344


Q ss_pred             cCCCCCcceEEEeeccceEEEeccCCCCCC--C-ceeeEEEEEEeCCccccceEE---ecccceEEEeCCCCCcEEEEEE
Q psy8771         619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSG--E-NIISYELYWNDTYAKAKHHRR---IGLVETYSLTGLYPNTLYYIWL  692 (904)
Q Consensus       619 ~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~--~-~~~~y~v~~~~~~~~~~~~~~---~~~~~~~~l~~L~p~t~Y~v~V  692 (904)
                      .+|.+|+++.......+.++++|.++...+  | ....|.|.|+..+........   .+....+.+.+|.+.+.|.|+|
T Consensus       280 ~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~~~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V  359 (483)
T 3e0g_A          280 YPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTL  359 (483)
T ss_dssp             CCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCCEEEECCCSSCSCSCEEEEEECCTTCCCEEEEE
T ss_pred             CCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCCCccccCCcccCCCEEEEEEccCCCCcEEEEEE
Confidence            467889999988888889999999976542  2 378999999764322111000   1234578999999999999999


Q ss_pred             EEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec
Q psy8771         693 AAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK  772 (904)
Q Consensus       693 ~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~  772 (904)
                      .|.|..|.+. +. ..+.....+++.||.++.+...+.+++.|+|++|.  ..++.+..|+|+|+..+.... .....+.
T Consensus       360 ~A~N~lG~~~-S~-~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~--~~~~~~L~YeVrYr~~~~~~~-~~~vsv~  434 (483)
T 3e0g_A          360 NAHNPLGRSQ-ST-ILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPG--NFAKINFLCEIEIKKSNSVQE-QRNVTIQ  434 (483)
T ss_dssp             EEECSSCEEE-EE-EEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCS--CCTTSBCCCEEEEECSSSCCC-EEECCCB
T ss_pred             EEEeCCCCcc-cc-eEEEeccccCCCCCeeeEEEEecCCeEEEEECCCC--CCCCceEEEEEEEEECCCCCc-eEEEEEe
Confidence            9999998765 32 44544444555689999998888899999999994  456678899999998764321 1111221


Q ss_pred             ----CcceEEecCCCCCceEEEEEEEeeCCCC---CCCCCcEEeecCCC
Q psy8771         773 ----NQTSFVLDELKKWTEYRIWVLAGTSIGD---GPSSYPITIRTHED  814 (904)
Q Consensus       773 ----~~~~~~i~~L~p~t~Y~~~V~a~~~~g~---g~~s~~~~~~t~~~  814 (904)
                          ....+.+.+|.|++.|.|+|+|. ..|.   |++|.++.++|.++
T Consensus       435 ~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~E~  482 (483)
T 3e0g_A          435 GVENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTTEA  482 (483)
T ss_dssp             CCSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCCCC
T ss_pred             ccCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECCCC
Confidence                23367899999999999999999 6665   78888888888654

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}

Probab=99.74  E-value=6.1e-15  Score=176.81  Aligned_cols=682  Identities=12%  Similarity=0.110  Sum_probs=336.5

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC--ceeecceEEEEeee--cC------CeEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD--KLPVGRNVLTLDRV--TE------SENY  171 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--~~~~~~~~l~i~~l--~d------~g~Y  171 (904)
                      ..+|.|...|.+.+.+..|+++.|.|.+.|.|.|+|.|+|++|..+....  +....+++|.|.++  +|      +|.|
T Consensus        36 ~~~P~~~~~p~~~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~~~~~~g~l~i~~~~~~~~~~~~d~G~Y  115 (816)
T 3dmk_A           36 QKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVY  115 (816)
T ss_dssp             CEEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEE
T ss_pred             cCCCcEEeCCCCeEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceEEEeeCCcEEEcCCChHHccccccceEE
Confidence            56789999988867789999999999999999999999993377765432  34457889999887  44      8999


Q ss_pred             EEEEEecCcce-EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccc-eEEEEEEEeCCCC--------
Q psy8771         172 TCIAASVLGVI-ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETL-LYYVIQYKPKAAN--------  241 (904)
Q Consensus       172 ~c~a~n~~g~~-~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~-~~y~v~~~~~~~~--------  241 (904)
                      +|.|.|..|.. +..+.|.+.  ..+.  ....+....+  ....++.|.|..+.... ....+.|...+..        
T Consensus       116 ~C~a~n~~G~~~S~~~~v~~~--~~~~--~~~~~~~~~v--~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~  189 (816)
T 3dmk_A          116 ACLARNQFGSIISRDVHVRAV--VAQY--YEADVNKEHV--IRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEY  189 (816)
T ss_dssp             EEEEEETTEEEEEEEEEEEEE--CCCC--CCCBCCCEEE--ETTSCEEECCBCCHHHHTTEEEEEEEETTSCEECBSSCB
T ss_pred             EEEEecCcceEEccceEEEEE--Eccc--cEEEEecceE--ecCceEEEEECCCccccccEEEEEEEecCceEeccccCC
Confidence            99999999975 455555544  1111  1223333333  45677888888762211 1234555543221        


Q ss_pred             -CCeEEeecceeceEEEcCCCCCCe-EEEEEEEEcCCCCCC-CCC---CeEEecCCCCCCCCCCc------eEecccCCC
Q psy8771         242 -TPYSEISGIITTYYTVRNLSPYTE-YEFYIIAVNNLGRGP-PSS---PAVITTGETEPGTAPRD------VQVRPLSSS  309 (904)
Q Consensus       242 -~~~~~~~~~~~~~~~i~~L~p~~~-Y~~~v~a~n~~g~s~-~s~---~~~~~t~~~~p~~~p~~------l~~~~~~~~  309 (904)
                       ..+..   .....+.|.++++.+. +.|+|.|.|..+... .+.   .+.+.. +. ...+|..      -........
T Consensus       190 ~~r~~~---~~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~-~~-~~~~P~i~~~~~~~~~~v~~g~  264 (816)
T 3dmk_A          190 DGKYLV---LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITE-PI-SSAVPKVVSLAKFDMKTYSGSS  264 (816)
T ss_dssp             TTTEEE---CTTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEEC-CC-SCCCCBCCGGGGEEEEEECTTS
T ss_pred             CceEEE---ecCceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeC-CC-CCCCCccccccCccceEEeCCC
Confidence             11111   1235799999999998 999999997654321 111   122221 11 1112221      112223445


Q ss_pred             eeEEEecCCCCCCceeeEEEEEe--------------eceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeecc
Q psy8771         310 TMVIQWDEPETPNGQITAKHHRR--------------IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ  375 (904)
Q Consensus       310 ~v~l~W~~p~~~~~~~~~~~~~~--------------~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~  375 (904)
                      .+.|.+.....+...+.++....              .....++.|..+.......+++.+.|..|.......+.+... 
T Consensus       265 ~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~-  343 (816)
T 3dmk_A          265 TMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP-  343 (816)
T ss_dssp             CEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEE-
T ss_pred             eEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCC-
Confidence            66777765544444555543110              011236788888888888888888887764321111111000 


Q ss_pred             CCCCCCCCcccccccccceeee--EEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEE
Q psy8771         376 YGKTPGFGEQAAKHHRRIGLVE--TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLY  453 (904)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y  453 (904)
                          +.............+...  ...+.+....  -..|...    |.           ........+.|.++......
T Consensus       344 ----~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~--~v~W~k~----g~-----------~~~~~~~~L~i~~v~~~d~G  402 (816)
T 3dmk_A          344 ----LSAKIDPPTQTVDFGRPAVFTCQYTGNPIK--TVSWMKD----GK-----------AIGHSESVLRIESVKKEDKG  402 (816)
T ss_dssp             ----EEEEEESSEEECCTTSCEEEEEEEEEECCC--EEEEEET----TE-----------ECSCCSSEEEESSCCGGGCE
T ss_pred             ----CceeeCCCceEecCCCCEEEEEEEeccCCC--EEEEEEC----CE-----------ECCCCCCEEEEcCCCHHHCE
Confidence                000000000000011111  1111111111  1122211    00           00112345788899998899


Q ss_pred             EEEEEEeeCCCCCCCCCCceeeecCCCCCC---CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCC--c
Q psy8771         454 YIWLAAQSPRGEGATTPPIPVRTKQYEPGT---APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPM--S  528 (904)
Q Consensus       454 ~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~---~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~--~  528 (904)
                      .|+|.|.|..|....+..+.+.... .|+.   .+.+..+  .....+.|.......+     .-.+.|...+....  .
T Consensus       403 ~Y~C~a~n~~g~~~~~~~l~v~~~~-~~p~i~~~~~~~~v--~~G~~v~L~C~~~g~p-----~p~v~W~~~g~~l~~~~  474 (816)
T 3dmk_A          403 MYQCFVRNDRESAEASAELKLGGRF-DPPVIRQAFQEETM--EPGPSVFLKCVAGGNP-----TPEISWELDGKKIANND  474 (816)
T ss_dssp             EEEEEEECSSCEEEECCEEECCCSS-CCCEEEEECCCEEE--CSSSCEEEEEEEECSS-----CCEEEEEETTEECCSCT
T ss_pred             EEEEEEECCCCcEEEEEEEEEcccc-CCCceEecCcceEE--cCCCCEEEEEEEecCC-----CCEEEEEECCEECCCCC
Confidence            9999999987754433333222111 1110   0111111  1233455555331110     01345554331100  1


Q ss_pred             ceEEE--ee-c--CceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCC
Q psy8771         529 AWETQ--VV-D--NNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKP  603 (904)
Q Consensus       529 ~~~~~--~~-~--~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~  603 (904)
                      .....  .. .  ....+.|..+.......+++.|.|..|....+..+.+...+.. ..+....+  .....+.|.....
T Consensus       475 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~-~~~~~~~v--~~G~~v~l~C~~~  551 (816)
T 3dmk_A          475 RYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYI-RQMEKKAI--VAGETLIVTCPVA  551 (816)
T ss_dssp             TEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEE-CCCCCEEE--ETTCCEEEECCEE
T ss_pred             CcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCee-EccCCeEE--ecCCeEEEEEEec
Confidence            11110  01 1  1234778888888888888899998775433333333221111 11222222  1233455544322


Q ss_pred             CCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeC
Q psy8771         604 THSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTG  681 (904)
Q Consensus       604 ~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~  681 (904)
                      .                             ....                 .+.|...+....  ..........+.|.+
T Consensus       552 g-----------------------------~p~~-----------------~i~W~k~~~~l~~~~~~~~~~~~~l~i~~  585 (816)
T 3dmk_A          552 G-----------------------------YPID-----------------SIVWERDNRALPINRKQKVFPNGTLIIEN  585 (816)
T ss_dssp             C-----------------------------SSEE-----------------EEEEEETTEESCCSTTEEECTTSEEEESS
T ss_pred             C-----------------------------CCCC-----------------EEEEEECCeEcccCCceEEecCCeEEEEe
Confidence            1                             0111                 333333322111  111112334678888


Q ss_pred             CC-CCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC--CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEE
Q psy8771         682 LY-PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG--APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE  758 (904)
Q Consensus       682 L~-p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~--~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~  758 (904)
                      +. ......++..|.|..|... +..+.+.....++.  ..+....  ......+.|.+.....   ..+   ..|.|..
T Consensus       586 v~~~~d~G~Y~C~a~n~~g~~~-~~~~~v~v~~~p~~~~~~~~~~~--~~~G~~v~L~C~~~~~---~~~---~~i~W~~  656 (816)
T 3dmk_A          586 VERNSDQATYTCVAKNQEGYSA-RGSLEVQVMVLPRIIPFAFEEGP--AQVGQYLTLHCSVPGG---DLP---LNIDWTL  656 (816)
T ss_dssp             CCHHHHCEEEEEEEEESSSCEE-EEEEEEEEECCCCCBCCCCCSSC--EESSCEEEEEEBCCCS---SSC---CEEEEEE
T ss_pred             cCccccCEEEEEEEEECCCcee-eeeEEEEEecCCccccccccccc--cCCCCeEEEEEEEeCC---CCC---CEEEEEE
Confidence            86 4566677778889877532 11222222221111  1112222  2246788888876421   111   2345555


Q ss_pred             ccCCCC---ccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC---CCCCCc---cC------
Q psy8771         759 TGRSDS---EASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED---DPSEVC---PT------  822 (904)
Q Consensus       759 ~~~~~~---~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~---~P~~v~---~~------  822 (904)
                      .+....   ........ ....+.|.++.......++..|.|..|....+..+.+...+.   .|....   ..      
T Consensus       657 ~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C  736 (816)
T 3dmk_A          657 DGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVEC  736 (816)
T ss_dssp             TTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEEC
T ss_pred             CCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEE
Confidence            442211   11122222 456788999999999999999999888654333232221110   111100   00      


Q ss_pred             --------CcceeeCCCC-CceeeeeeeecCCceEEecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCCCCCCce
Q psy8771         823 --------QNDFRKNKKT-NGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPE  888 (904)
Q Consensus       823 --------~~~W~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~~~  888 (904)
                              .++|...... .+...  ....... .. .  ...++.|.++.....=.++..|.|..|....+...
T Consensus       737 ~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~~~-~~-~--~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~  805 (816)
T 3dmk_A          737 KADGFPKPQVTWKKAVGDTPGEYK--DLKKSDN-IR-V--EEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIM  805 (816)
T ss_dssp             EEEEESCCEEECCEECSSSTTCCB--CCCCBTT-EE-E--ETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEE
T ss_pred             EEecCCCCeEEEEecCCCCCcccc--ccccCCC-EE-e--cCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEE
Confidence                    1155421100 00000  0000000 01 1  12368899999988888999999999976433333

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A

Probab=99.73  E-value=4.7e-17  Score=159.91  Aligned_cols=190  Identities=16%  Similarity=0.180  Sum_probs=132.7

Q ss_pred             CCCCCCCceEEec-CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEE
Q psy8771         579 VPSQPRDLRAVDI-QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY  657 (904)
Q Consensus       579 ~p~~p~~~~~~~~-~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~  657 (904)
                      +|.+|.++.+... ..+++.++|.++.+                                         .+ ....|.|.
T Consensus         4 pP~~P~~l~c~~~~~~~~~~~~W~p~~~-----------------------------------------~~-~~~~Y~l~   41 (215)
T 1cd9_B            4 PPASPSNLSCLMHLTTNSLVCQWEPGPE-----------------------------------------TH-LPTSFILK   41 (215)
T ss_dssp             CCCCCEEEEEEEETTTTEEEEEEECCSC-----------------------------------------CS-SCCEEEEE
T ss_pred             CCCCCeeeeeecCCCcccEEEEecCCCC-----------------------------------------CC-CceeEEEE
Confidence            4567777777665 46777788877643                                         22 23568888


Q ss_pred             EEeCCcccc------ceEEe---cccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec
Q psy8771         658 WNDTYAKAK------HHRRI---GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL  728 (904)
Q Consensus       658 ~~~~~~~~~------~~~~~---~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~  728 (904)
                      |+.......      .....   .....+.+.+|.+++.|.|+|.|.|..|.+. +..+.+.+....+..||.++.+...
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~~~V~A~N~~G~~~-s~~~~~~~~~~v~p~pP~~~~~~~~  120 (215)
T 1cd9_B           42 SFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSE-SPKLCLDPMDVVKLEPPMLQALDIG  120 (215)
T ss_dssp             EEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEEEEEEEEETTEEEE-CCCEEECGGGGBCCCCCEEEECCC-
T ss_pred             EEecCCcccccccccccCCCCCCCcEEEECCcccccceEEEEEEEEECCCCCcc-CccEEEchHHceEeCCCcEEEEEEe
Confidence            876543211      11110   1234677789999999999999999998753 4567777666566668999988776


Q ss_pred             ------CCCEEEEEecCCCCCCCCccEEEEEEEEE-EccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCC
Q psy8771         729 ------SSTSIRISWEPPPVERSNGHIVYYKLQFV-ETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGD  800 (904)
Q Consensus       729 ------~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~-~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~  800 (904)
                            ..+++.|+|++|.  ..+..+.+|+|+|+ ..+...+.. ..... ..+.+.|.+|+|++.|.|+|+|.+..|.
T Consensus       121 ~~~~~~~~~~~~l~W~~p~--~~~~~~l~Y~v~y~~~~~~~~w~~-~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~  197 (215)
T 1cd9_B          121 PDVVSHQPGCLWLSWKPWK--PSEYMEQECELRYQPQLKGANWTL-VFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLP  197 (215)
T ss_dssp             ------CCSCEEEEEECCG--GGTTSCEEEEEEEEESSTTCCCEE-EEEEESCEEEEEECCCCSCSCEEEEEEEEESSSC
T ss_pred             ccccCCCCCeEEEEEeCCC--CCCeEEEEEEEEEccCCCCCCcEE-EecccCcceEEEEcCCCCCCEEEEEEEeeECCCC
Confidence                  6789999999985  23334489999999 554443321 11223 6688999999999999999999998665


Q ss_pred             C---CCCCcEEeecCCC
Q psy8771         801 G---PSSYPITIRTHED  814 (904)
Q Consensus       801 g---~~s~~~~~~t~~~  814 (904)
                      |   ++|.++.++|.++
T Consensus       198 G~wS~wS~~~~~~T~e~  214 (215)
T 1cd9_B          198 GFWSPWSPGLQLRPTMK  214 (215)
T ss_dssp             CCCCCCCCCEEECCCC-
T ss_pred             CCCcCCCCccceecCCC
Confidence            4   6788899998764

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A

Probab=99.72  E-value=1.3e-16  Score=156.83  Aligned_cols=192  Identities=16%  Similarity=0.110  Sum_probs=138.1

Q ss_pred             CCCCCCCCeEEEec-CCceEEEEecCCCCCCCceeeEEEEEEeCCCCC---CcceEEEee---cCceEEEEcCCCCCCeE
Q psy8771         480 EPGTAPRDVQVRPL-SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLP---MSAWETQVV---DNNQLTTISDLTPHTIY  552 (904)
Q Consensus       480 ~p~~~p~~l~v~~~-~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~L~p~t~Y  552 (904)
                      .||.+|.++.+... ..+++.++|+++.+.+. ...|.|+|+......   ...+.....   .....+.+.+|.+++.|
T Consensus         3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y   81 (215)
T 1cd9_B            3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETHL-PTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYM   81 (215)
T ss_dssp             CCCCCCEEEEEEEETTTTEEEEEEECCSCCSS-CCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCE
T ss_pred             CCCCCCeeeeeecCCCcccEEEEecCCCCCCC-ceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceEE
Confidence            56789999998876 67899999999876443 457999998754210   111222211   23345677899999999


Q ss_pred             EEEEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEec------CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCc
Q psy8771         553 TIRVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDI------QETAVTLAWSKPTHSGENIISYELYWNDTYAKPR  625 (904)
Q Consensus       553 ~~~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~------~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~  625 (904)
                      .|+|.|.|..|.+ .|....+.+.. ..|.+|.++.+...      ..+++.|+|.+|..                    
T Consensus        82 ~~~V~A~N~~G~~-~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~--------------------  140 (215)
T 1cd9_B           82 AIWVQAENMLGSS-ESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP--------------------  140 (215)
T ss_dssp             EEEEEEEETTEEE-ECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG--------------------
T ss_pred             EEEEEEECCCCCc-cCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC--------------------
Confidence            9999999999875 35556666544 34678888888776      57889999998853                    


Q ss_pred             ceEEEeeccceEEEeccCCCCCCCceeeEEEEEE-eCCccccceE--EecccceEEEeCCCCCcEEEEEEEEEcCCCCC-
Q psy8771         626 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWN-DTYAKAKHHR--RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG-  701 (904)
Q Consensus       626 ~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~-~~~~~~~~~~--~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~-  701 (904)
                                           .+..+.+|.|+|+ ..+...+...  .......+.|.+|+|++.|.|+|+|++..|.| 
T Consensus       141 ---------------------~~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~  199 (215)
T 1cd9_B          141 ---------------------SEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGF  199 (215)
T ss_dssp             ---------------------GTTSCEEEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCC
T ss_pred             ---------------------CCeEEEEEEEEEccCCCCCCcEEEecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCC
Confidence                                 2333479999998 5555554322  23445789999999999999999999986664 


Q ss_pred             --CCCCCeeEEecCC
Q psy8771         702 --ATTPPIPVRTKQY  714 (904)
Q Consensus       702 --~~s~~~~~~t~~~  714 (904)
                        .+|..+.++|.+.
T Consensus       200 wS~wS~~~~~~T~e~  214 (215)
T 1cd9_B          200 WSPWSPGLQLRPTMK  214 (215)
T ss_dssp             CCCCCCCEEECCCC-
T ss_pred             CcCCCCccceecCCC
Confidence              5777888888654

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}

Probab=99.69  E-value=7.9e-15  Score=175.86  Aligned_cols=261  Identities=17%  Similarity=0.183  Sum_probs=167.5

Q ss_pred             CcceeeeccceEEEEecC----CCCCcc-eeeEeeCCCCCCCCcEEEeccCCceEEEEeCCCC----CCCceeccccccc
Q psy8771           2 DTRCYVESPEEVFIILCP----LPPLIP-GYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPET----PNGQITHPPTRAA   72 (904)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~----~~p~~~-~~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~----~~g~i~~~~~~~~   72 (904)
                      .|+|.+.+.......-..    .+|... ..-......+.+..|.|...+.+...|.|.+...    .++.+........
T Consensus       320 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~L~i~~v~~~  399 (816)
T 3dmk_A          320 KYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKE  399 (816)
T ss_dssp             EEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGG
T ss_pred             EEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCCEEEEcCCCHH
Confidence            489999887654322111    111110 0011122234677788888788889999987532    2334544445555


Q ss_pred             ccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc
Q psy8771          73 RSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK  152 (904)
Q Consensus        73 ~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~  152 (904)
                      +.....|...+..........+.+.  ....||.|...+.+ ..+.+|+.+.|.|.+.|.|.|.|+|+|+ +..+....+
T Consensus       400 d~G~Y~C~a~n~~g~~~~~~~l~v~--~~~~~p~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p~v~W~~~-g~~l~~~~~  475 (816)
T 3dmk_A          400 DKGMYQCFVRNDRESAEASAELKLG--GRFDPPVIRQAFQE-ETMEPGPSVFLKCVAGGNPTPEISWELD-GKKIANNDR  475 (816)
T ss_dssp             GCEEEEEEEECSSCEEEECCEEECC--CSSCCCEEEEECCC-EEECSSSCEEEEEEEECSSCCEEEEEET-TEECCSCTT
T ss_pred             HCEEEEEEEECCCCcEEEEEEEEEc--cccCCCceEecCcc-eEEcCCCCEEEEEEEecCCCCEEEEEEC-CEECCCCCC
Confidence            5555555555443333334444442  23578888888887 8999999999999999999999999999 777766666


Q ss_pred             eeec---------ceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCC--CCcceEEEeecCCeEEE
Q psy8771         153 LPVG---------RNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPV--APLDVKISEVTATSVRL  219 (904)
Q Consensus       153 ~~~~---------~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~--~p~~l~~~~~~~~sv~l  219 (904)
                      +...         ...|.|.++  +|+|.|+|.|.|..|....++.|.|.       ..|.  .+....+  .....+.|
T Consensus       476 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-------~~p~~~~~~~~~v--~~G~~v~l  546 (816)
T 3dmk_A          476 YQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVY-------GLPYIRQMEKKAI--VAGETLIV  546 (816)
T ss_dssp             EEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEEC-------SSCEECCCCCEEE--ETTCCEEE
T ss_pred             cccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEe-------cCCeeEccCCeEE--ecCCeEEE
Confidence            5431         136999998  69999999999999999999999887       3321  2223323  34456777


Q ss_pred             EEeCCCccceEEEEEEEeCCCCC---CeEEeecceeceEEEcCCC-CCCeEEEEEEEEcCCCCC
Q psy8771         220 DWTYPSETLLYYVIQYKPKAANT---PYSEISGIITTYYTVRNLS-PYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       220 ~W~~~~~~~~~y~v~~~~~~~~~---~~~~~~~~~~~~~~i~~L~-p~~~Y~~~v~a~n~~g~s  279 (904)
                      .+...+.+..  .+.|...+...   ......  ....+.|.++. ..+.+.|+|.|.|..|.+
T Consensus       547 ~C~~~g~p~~--~i~W~k~~~~l~~~~~~~~~--~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~  606 (816)
T 3dmk_A          547 TCPVAGYPID--SIVWERDNRALPINRKQKVF--PNGTLIIENVERNSDQATYTCVAKNQEGYS  606 (816)
T ss_dssp             ECCEECSSEE--EEEEEETTEESCCSTTEEEC--TTSEEEESSCCHHHHCEEEEEEEEESSSCE
T ss_pred             EEEecCCCCC--EEEEEECCeEcccCCceEEe--cCCeEEEEecCccccCEEEEEEEEECCCce
Confidence            7765443333  45555442211   111111  23569999998 689999999999998854

>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=99.68  E-value=5.7e-17  Score=160.29  Aligned_cols=167  Identities=16%  Similarity=0.172  Sum_probs=107.9

Q ss_pred             CCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEE
Q psy8771         647 SGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCE  726 (904)
Q Consensus       647 ~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~  726 (904)
                      .+..+.+|.|++................+++++.+|.|++.|.|+|+|+|..|.|.+|....+.+....|..+|.. .+.
T Consensus        18 ~~~~Vt~Y~~~~~~~~~~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~-~~~   96 (232)
T 4go6_B           18 TNVMVTHYFLPPDDAVPSDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCA-IKI   96 (232)
T ss_dssp             SEEEECEEECCCC------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEE-EEE
T ss_pred             CCEEEEEEEEEeeCCCCCcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCee-eEE
Confidence            4556888988876554443344444556789999999999999999999999999999888888876656555554 444


Q ss_pred             ecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCcc---------EEEEec----Ccc-------eEEecCCCCCc
Q psy8771         727 PLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA---------SIVTLK----NQT-------SFVLDELKKWT  786 (904)
Q Consensus       727 ~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~---------~~~~~~----~~~-------~~~i~~L~p~t  786 (904)
                      ..+.+++.|+|.+|  ...+|.|.+|.|+|+.........         .+..+.    ...       .+.+.+|.+++
T Consensus        97 ~~~~~sv~l~W~~P--~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t  174 (232)
T 4go6_B           97 SKSPDGAHLTWEPP--SVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKP  174 (232)
T ss_dssp             EEETTEEEEEEECC--SCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSE
T ss_pred             ecCCCEEEEEEeCC--CCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccCC
Confidence            56789999999999  457899999999998765332111         111111    112       22356899999


Q ss_pred             eEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771         787 EYRIWVLAGTSIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       787 ~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P  816 (904)
                      .|.|||+|.|..|.|++|+...+.+.+..|
T Consensus       175 ~Y~frV~A~N~~G~Gp~S~v~t~~~~~~~p  204 (232)
T 4go6_B          175 AIIFRIAARNEKGYGPATQVRWLQETSKDS  204 (232)
T ss_dssp             EEEEEEEEECSSCBCCCEEEEEECC-----
T ss_pred             ceEEEEEEECCCcCCCCcccEEeccCCCCC
Confidence            999999999999999998866666555444

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A

Probab=99.65  E-value=1.8e-13  Score=143.65  Aligned_cols=262  Identities=12%  Similarity=0.111  Sum_probs=164.0

Q ss_pred             CCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCC--eEEEEEEEEeCCCCCCCCCcE
Q psy8771         494 SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHT--IYTIRVQAFTSVGPGPLSAPV  571 (904)
Q Consensus       494 ~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t--~Y~~~V~a~~~~g~~~~S~~~  571 (904)
                      ....+.|........    ....|.|...+........... .....+.|.++....  .|.+.     ..|.-..+..+
T Consensus        20 ~G~~v~l~C~~~~~~----~~~~i~W~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~-----~~g~~~~~~~L   89 (325)
T 1n26_A           20 PGDSVTLTCPGVEPE----DNATVHWVLRKPAAGSHPSRWA-GMGRRLLLRSVQLHDSGNYSCY-----RAGRPAGTVHL   89 (325)
T ss_dssp             TTCCEEEECTTSCTT----CCSEEEEEEECSSSSCCCEEEE-EESSEEEECSCCGGGCEEEEEE-----SSSSCSCEEEE
T ss_pred             CCCcEEEEeCCCCCC----CCceEEEEECCccCCccccccc-cccceEEecccchhhCeEeEEE-----eCCEEeeeEEE
Confidence            346777777653211    2244566554322111111111 223457788877543  56554     23432222222


Q ss_pred             EEecCCCCCCCCCCceEEe-cCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCc
Q psy8771         572 LVKTQQGVPSQPRDLRAVD-IQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN  650 (904)
Q Consensus       572 ~~~t~~~~p~~p~~~~~~~-~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~  650 (904)
                      .+   ..+|.+|. +.+.. .....+.++|.++.+                                          .+.
T Consensus        90 ~V---~~pP~~P~-l~c~~~~~~~~~~c~W~~~~~------------------------------------------~~~  123 (325)
T 1n26_A           90 LV---DVPPEEPQ-LSCFRKSPLSNVVCEWGPRST------------------------------------------PSL  123 (325)
T ss_dssp             EE---CCCCCCCC-CEEEBSSTTSCEEEEECCSSC------------------------------------------CCT
T ss_pred             Ee---ccCCCCCc-eeEEeecCCCcEEEEECCCCC------------------------------------------CCC
Confidence            22   23566666 76653 346689999997653                                          223


Q ss_pred             eeeEEEEEEeCCcc---ccceEE----ecccceEEEeCCC-CCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCC
Q psy8771         651 IISYELYWNDTYAK---AKHHRR----IGLVETYSLTGLY-PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN  722 (904)
Q Consensus       651 ~~~y~v~~~~~~~~---~~~~~~----~~~~~~~~l~~L~-p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~  722 (904)
                      ...|.|.|+...+.   .+....    .....++.+..|. +++.|.|+|.|.|..|.+. +....+.+....++.||.+
T Consensus       124 ~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~-s~~~~~~~~~~v~P~pP~~  202 (325)
T 1n26_A          124 TTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKF-SKTQTFQGCGILQPDPPAN  202 (325)
T ss_dssp             TCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEEE-CCCEEEETTTCBCCCCCEE
T ss_pred             CceEEEEEEEccCCCCCcccccCCCCCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCcc-cCcEEEeeccccCCCCCcc
Confidence            46777777654211   111111    1234578888876 7899999999999998764 4455666555555668999


Q ss_pred             cEEEecCC--CEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCC
Q psy8771         723 VSCEPLSS--TSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIG  799 (904)
Q Consensus       723 l~~~~~~~--~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g  799 (904)
                      +.+...+.  +++.|+|++|.....++.+.+|+|+|+..+...|  ....+. ..+.+.|.+|.|++.|.|+|+|.|..|
T Consensus       203 l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W--~~~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g  280 (325)
T 1n26_A          203 ITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTF--TTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFG  280 (325)
T ss_dssp             EEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCC--EEEECGGGCSEEEESSCCTTCCEEEEEEEEETTT
T ss_pred             eEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCC--EEEcccCCceEEEEeCCCCCCeEEEEEEEecCCC
Confidence            99987653  6999999999643356678999999998865444  333444 678899999999999999999999888


Q ss_pred             CCCC---CCcEEeecCCC
Q psy8771         800 DGPS---SYPITIRTHED  814 (904)
Q Consensus       800 ~g~~---s~~~~~~t~~~  814 (904)
                      .|.+   |+++.++|...
T Consensus       281 ~G~~S~wS~~~~~~~~~~  298 (325)
T 1n26_A          281 QGEWSEWSPEAMGTPWTE  298 (325)
T ss_dssp             BSCCCCCCCCEEECCCCC
T ss_pred             CCCCcCCCCccceecCCC
Confidence            6655   56666665443

>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=99.65  E-value=3e-16  Score=155.06  Aligned_cols=182  Identities=16%  Similarity=0.166  Sum_probs=101.2

Q ss_pred             CCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCce
Q psy8771         508 PNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLR  587 (904)
Q Consensus       508 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~  587 (904)
                      .++.|.+|.|++.....   ..+........+++.+.+|.|++.|.|+|+|+|..|.|++|....+.+....|+.|..+.
T Consensus        18 ~~~~Vt~Y~~~~~~~~~---~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~   94 (232)
T 4go6_B           18 TNVMVTHYFLPPDDAVP---SDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAI   94 (232)
T ss_dssp             SEEEECEEECCCC---------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEE
T ss_pred             CCEEEEEEEEEeeCCCC---CcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCeee
Confidence            34567889887655432   222333345667899999999999999999999999999998888877655444444445


Q ss_pred             EEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc
Q psy8771         588 AVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH  667 (904)
Q Consensus       588 ~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~  667 (904)
                      ....+.+++.|+|.+|..+||.|.+|.|+++...........             .   .......+.-.+...   ...
T Consensus        95 ~~~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~-------------~---~~~~~~~~~~~~~~~---~~~  155 (232)
T 4go6_B           95 KISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELK-------------S---STPAQLAFMRVYCGP---SPS  155 (232)
T ss_dssp             EEEEETTEEEEEEECCSCCSSCCCEEEEEEEEC-----------------------------CCEEEEEEEEES---SSE
T ss_pred             EEecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceee-------------e---ccCCceeeEEEEecc---Cce
Confidence            556678899999999988655555555554321000000000             0   000000000000000   000


Q ss_pred             eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEe
Q psy8771         668 HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT  711 (904)
Q Consensus       668 ~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t  711 (904)
                      ...........+.+|.+++.|.|+|+|+|..|.|++|....+.+
T Consensus       156 ~~~~~~~l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~  199 (232)
T 4go6_B          156 CLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQE  199 (232)
T ss_dssp             EEEEHHHHTTBCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC
T ss_pred             EEEEccccEEeeecCccCCceEEEEEEECCCcCCCCcccEEecc
Confidence            11111223344568999999999999999999998875433333

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.65  E-value=6.7e-16  Score=136.27  Aligned_cols=121  Identities=39%  Similarity=0.509  Sum_probs=106.5

Q ss_pred             EEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE
Q psy8771         691 WLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT  770 (904)
Q Consensus       691 ~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~  770 (904)
                      +|+|+|..|.|.+|..+.+.|.+..|..+|.++++...+.+++.|+|++|..+..+|.+.+|.|+|+..+...+  . ..
T Consensus         3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~--~-~~   79 (124)
T 2ed9_A            3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGE--M-ET   79 (124)
T ss_dssp             SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCC--E-EE
T ss_pred             eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcc--e-EE
Confidence            57899999999999999999999999888999999999999999999999654478999999999999765443  2 22


Q ss_pred             ec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         771 LK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       771 ~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      +. ..+.+.|.+|+|++.|.|+|+|.|..|.|++|.++.++|.++
T Consensus        80 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ed  124 (124)
T 2ed9_A           80 LEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPEN  124 (124)
T ss_dssp             ECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCCC
T ss_pred             ecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCC
Confidence            44 888999999999999999999999999999999999999753

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}

Probab=99.62  E-value=1e-14  Score=140.12  Aligned_cols=181  Identities=15%  Similarity=0.226  Sum_probs=134.7

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      .+|.++.+...+. ...|+|++|.+.++++ .|.|+|+..     ..|...-. ...+.+.|.+|.+++.|.|+|+|.++
T Consensus         3 p~P~nv~~~s~n~-~~iL~W~pp~~~~~~v-~Y~V~y~~~-----~~w~~~c~~~~~~~c~lt~l~~~~~Y~~rV~A~~~   75 (201)
T 3lqm_A            3 PPPENVRMNSVNF-KNILQWESPAFAKGQL-TFTAQYLSY-----RIFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFA   75 (201)
T ss_dssp             CCCEEEEEEEETT-EEEEEEECCCCSSSCC-EEEEEEEET-----TEEEEEEEEESSSEEECTTSCSSSCEEEEEEEEET
T ss_pred             CCCcccEEEEECC-ceEEEECCCCCCCCCe-EEEEEEEEC-----CCcccCcCccCCCEEECCCCccCCCEEEEEEEecC
Confidence            4789999887775 5679999988776765 499999985     24654322 45678999999999999999999999


Q ss_pred             CCCCCCCCcEEEec-CCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEe
Q psy8771         562 VGPGPLSAPVLVKT-QQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLA  640 (904)
Q Consensus       562 ~g~~~~S~~~~~~t-~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~  640 (904)
                      .|.|.++.. .+.. ....+.+| .+.+.. ..++|.|.|.+|...                                  
T Consensus        76 ~~~S~~s~~-~f~~~~~t~~~PP-~v~~~~-~~~si~v~w~~P~~~----------------------------------  118 (201)
T 3lqm_A           76 DEHSDWVQI-TFSPVDDTIIGPP-GMQVEV-LADCLHMRFLAPKIE----------------------------------  118 (201)
T ss_dssp             TEECCCEEE-EECHHHHSBCCCC-EEEEEE-ETTEEEEEEECCEEE----------------------------------
T ss_pred             CCcCcceee-eeeecccCeeCCC-EEEEEE-eCCEEEEEEcCCCcc----------------------------------
Confidence            888877753 3432 12334545 677744 567999999988521                                  


Q ss_pred             ccCCCCCCC---------ceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcC--CCCCCCCCCeeE
Q psy8771         641 WSKPTHSGE---------NIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP--RGEGATTPPIPV  709 (904)
Q Consensus       641 w~~~~~~~~---------~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~--~G~~~~s~~~~~  709 (904)
                            .++         .+..|.|.|+..+..... ........+.|.+|+|++.|.|+|+|.+.  .|.|.+|..+.+
T Consensus       119 ------~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~  191 (201)
T 3lqm_A          119 ------NEYETWTMKNVYNSWTYNVQYWKQGTDEKF-QITPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCE  191 (201)
T ss_dssp             ------CSSCEEEHHHHCTTCEEEEEEEETTCCCCE-EECCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEE
T ss_pred             ------CCCcccCHHHhCCceEEEEEEEECCCCcEE-EEEecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeE
Confidence                  112         267999999886554432 33345578999999999999999999996  578899998888


Q ss_pred             EecCC
Q psy8771         710 RTKQY  714 (904)
Q Consensus       710 ~t~~~  714 (904)
                      .|..+
T Consensus       192 ~T~~~  196 (201)
T 3lqm_A          192 QTTHD  196 (201)
T ss_dssp             ECCCG
T ss_pred             EeCCC
Confidence            88654

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.62  E-value=6.2e-15  Score=128.70  Aligned_cols=115  Identities=25%  Similarity=0.318  Sum_probs=99.2

Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceE
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSF  777 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~  777 (904)
                      |.|.+|..+.+.|.+..|..+|.++++...+.+++.|+|++|.  .  |.+.+|.|+|+..+..........+. ..+.+
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~--~--g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~   76 (119)
T 2ee2_A            1 GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVL--E--KIVESYQIRYWAAHDKEEAANRVQVTSQEYSA   76 (119)
T ss_dssp             CCCCCSSCCCCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCS--C--TTCCEEEEEEEESSSCGGGCEEEEEETTCSEE
T ss_pred             CCCCCCCCEEEECCCcCCCCCCCcEEEEEccCCEEEEEecCCC--C--CccceEEEEEEECCCcccCcEEEEcCCCEeEE
Confidence            6788898999999999999889999999999999999999994  2  78999999999876433333344444 77899


Q ss_pred             EecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771         778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~  817 (904)
                      .|.+|++++.|.|+|+|.|..|.|++|..+.++|...+|.
T Consensus        77 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp  116 (119)
T 2ee2_A           77 RLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASGP  116 (119)
T ss_dssp             EECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCCS
T ss_pred             EECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCCC
Confidence            9999999999999999999999999999999999887764

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.62  E-value=1.1e-14  Score=130.66  Aligned_cols=128  Identities=31%  Similarity=0.500  Sum_probs=108.1

Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEe--ecCce
Q psy8771         464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQV--VDNNQ  539 (904)
Q Consensus       464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~  539 (904)
                      |.|.+|..+.+.|....|..+|.++++...+.+++.|+|++|  ...+|.+.+|.|+|+..+..... +....  ....+
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~   79 (134)
T 2edx_A            1 GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRG-RHVVDGISREHS   79 (134)
T ss_dssp             CCCCCCCCCCCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCC-CEEECCCBTTCS
T ss_pred             CCCCCcCCEEEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcc-cEEEEeeCCCcc
Confidence            567788888999988888778999999999999999999998  66778999999999987643222 22222  35678


Q ss_pred             EEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCC-CCCCCceEEecC
Q psy8771         540 LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP-SQPRDLRAVDIQ  592 (904)
Q Consensus       540 ~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p-~~p~~~~~~~~~  592 (904)
                      .+.|.+|.|++.|.|+|+|+|..|.|++|..+.++|....| .+|.++++..++
T Consensus        80 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~s  133 (134)
T 2edx_A           80 SWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVESGPSS  133 (134)
T ss_dssp             EEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCSSCCCCCCCCCCCCC
T ss_pred             EEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCCCCCCCceeEEEEcc
Confidence            89999999999999999999999999999999999999888 689999887654

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.61  E-value=6e-15  Score=129.68  Aligned_cols=116  Identities=23%  Similarity=0.306  Sum_probs=97.1

Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEE-ecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-Ccce
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCE-PLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTS  776 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~-~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~  776 (904)
                      |.|.+|..+.++|.+.+|..+|.++++. ..+.++|.|+|++|+.+..||.+.+|.|+|+..+..........+. ..+.
T Consensus         1 G~g~~S~~v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~   80 (124)
T 2dbj_A            1 GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSR   80 (124)
T ss_dssp             CCSCCCCCCCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEEEESTTSC
T ss_pred             CcCCCCCCEEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEEeCCCcce
Confidence            6788899999999999999889999998 6889999999999976678999999999997543221111111233 7789


Q ss_pred             EEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       777 ~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      +.|.+|.+++.|.|+|+|+|..|.|++|.++.++|.++
T Consensus        81 ~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~  118 (124)
T 2dbj_A           81 ARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH  118 (124)
T ss_dssp             EEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred             EEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence            99999999999999999999999999999999999765

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.61  E-value=1.1e-14  Score=130.61  Aligned_cols=118  Identities=42%  Similarity=0.802  Sum_probs=102.1

Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE-ec-Ccce
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT-LK-NQTS  776 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~-~~-~~~~  776 (904)
                      |.|.+|..+.++|.+..|..+|.++++...+.+++.|+|++|.....+|.+.+|.|+|+..+.......... +. ..+.
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 2edx_A            1 GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSS   80 (134)
T ss_dssp             CCCCCCCCCCCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSE
T ss_pred             CCCCCcCCEEEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccE
Confidence            678889999999999999878999999999999999999999655678999999999998765443333232 23 7899


Q ss_pred             EEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771         777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       777 ~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P  816 (904)
                      ++|.+|.+++.|.|+|+|.|..|.|++|..+.++|...+|
T Consensus        81 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P  120 (134)
T 2edx_A           81 WDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVP  120 (134)
T ss_dssp             EEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCSS
T ss_pred             EEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCCC
Confidence            9999999999999999999999999999999999998877

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.61  E-value=1.9e-15  Score=134.54  Aligned_cols=123  Identities=25%  Similarity=0.433  Sum_probs=105.1

Q ss_pred             EEEEEcCCCCCCCCC-CeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEE
Q psy8771         691 WLAAQSPRGEGATTP-PIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV  769 (904)
Q Consensus       691 ~V~a~~~~G~~~~s~-~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~  769 (904)
                      .|+|+|..|.|.+|. .+.++|...+|. +|.++.+...+.+++.|+|++|  ...+|.+.+|.|+|+..+.........
T Consensus         2 sV~A~n~~G~g~~S~~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~   78 (130)
T 1wfo_A            2 SSGSSGRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPP--AAPNGIILAYQITHRLNTTTANTATVE   78 (130)
T ss_dssp             CCCCCCCCCCCCCCCCCSCCCCSCCCCC-CCCCCEEEEECSSEEEEECCCC--SCCCSCCCEEEEEEEESSCCCSCCCEE
T ss_pred             eeEEEecccCCCCCCCcEEEEcCCCCCC-CCCceEEEecCCCEEEEEEcCC--CCCCCceEEEEEEEEECCCCCceEEEE
Confidence            478999999999887 488999998886 7899999999999999999998  457889999999999876543323333


Q ss_pred             Eec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771         770 TLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       770 ~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P  816 (904)
                      .+. ..+.++|.+|+|++.|.|+|+|.|..|.|++|..+.++|....|
T Consensus        79 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p  126 (130)
T 1wfo_A           79 VLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSG  126 (130)
T ss_dssp             EECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCC
T ss_pred             EeCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCC
Confidence            444 88999999999999999999999999999999998999987765

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A

Probab=99.60  E-value=1.3e-13  Score=142.20  Aligned_cols=245  Identities=16%  Similarity=0.221  Sum_probs=157.6

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..||.|...|.+ +.+.+|+.++|.|.+.|.|.+.|+|+|+ +..+....++.+    +...|.|.++  +|+|.|+|.|
T Consensus         3 ~~pP~~~~~p~~-~~~~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~   80 (284)
T 2rik_A            3 MAPPFFDLKPVS-VDLALGESGTFKCHVTGTAPIKITWAKD-NREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYA   80 (284)
T ss_dssp             CCCCEEEECCCC-EEEETTCCEEEEEEEESSSCCEEEEEET-TEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred             cCCCEEEccccc-eEecCCCcEEEEEEEEcCCCCEEEEEEC-CEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEE
Confidence            468999999988 9999999999999999999999999999 767766555443    3578999998  6999999999


Q ss_pred             EecCcceEEEEEEEEEeecCCCCCCCC----CCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEe
Q psy8771         176 ASVLGVIETSTIVKVQCKYAPLLTLPV----APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEI  247 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~----~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~  247 (904)
                      .|..|..+..+.|.|.       ..|.    .+....+  .....+.|.+...+.+..  .+.|...+.    ...+...
T Consensus        81 ~n~~g~~~~~~~l~V~-------~~p~~~~~~~~~~~v--~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~~~~~~~~~~  149 (284)
T 2rik_A           81 SNVAGKDSCSAQLGVQ-------EPPRFIKKLEPSRIV--KQDEHTRYECKIGGSPEI--KVLWYKDETEIQESSKFRMS  149 (284)
T ss_dssp             EETTEEEEEEEEEEEE-------CCCEEEECCCSEEEE--ETTCCEEEEEEEESSSCC--EEEEEETTEECCCSSSEEEE
T ss_pred             EECCceEEEEEEEEcc-------CCCcccccCCCceEe--cCCceEEEEEEEeeeCCC--EEEEEECCEECcCCCcEEEE
Confidence            9999998888888887       3331    1111112  223344555544322222  244433321    1222222


Q ss_pred             ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeE
Q psy8771         248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA  327 (904)
Q Consensus       248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~  327 (904)
                      .......+.|.++...+.+.|+|.|.|..|....+..+.+...+. ....|....+.  ....+.|.+.....+...+.+
T Consensus       150 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~-~~~~~~~~~~~--~g~~v~l~C~~~g~p~~~v~W  226 (284)
T 2rik_A          150 FVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPV-FRKKPHPVETL--KGADVHLECELQGTPPFQVSW  226 (284)
T ss_dssp             EETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCB-CCSCCCCEEEC--TTCCEEEEEECBSSSCCEEEE
T ss_pred             EcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCc-ceeCCCcceec--CCCeEEEEEEEEecCCCEEEE
Confidence            223346799999999999999999999988643333333332211 11233333332  234466666554443334444


Q ss_pred             EEE------------EeeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         328 KHH------------RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       328 ~~~------------~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                      +..            ...+....+.|..+.....-.+++.|.|..|.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~  273 (284)
T 2rik_A          227 HKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGS  273 (284)
T ss_dssp             EETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred             EECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCc
Confidence            321            11222346778888888888888899888774

>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*

Probab=99.60  E-value=1.3e-13  Score=141.62  Aligned_cols=114  Identities=14%  Similarity=0.133  Sum_probs=71.5

Q ss_pred             EEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCC-ceEEEEecCCCCCCCc----eeeEEEEEEeCCCCC
Q psy8771         452 LYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSS-STMVIQWDEPETPNGQ----ITGYKVYYTQDQSLP  526 (904)
Q Consensus       452 ~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~-~~~~l~W~~p~~~~~~----i~~Y~v~~~~~~~~~  526 (904)
                      .|.|+|.|.|..|.+..  ...+.....+.|.||.+|.+..... +.+.|+|++|...+.+    ...|+|+|+..+.  
T Consensus       185 ~y~~~V~A~n~lg~~s~--~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~--  260 (306)
T 3d85_D          185 PIEVMVDAVHKLKYEQY--TSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSK--  260 (306)
T ss_dssp             CEEEEEEEEETTEEEEE--EEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC----
T ss_pred             EEEEEEEEEccCCcccc--ceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCC--
Confidence            34555555555443211  1222222223457899999987543 7999999998655432    3799999998764  


Q ss_pred             CcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEE
Q psy8771         527 MSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLV  573 (904)
Q Consensus       527 ~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~  573 (904)
                       ..|........+++.|   .+++.|.|+|||.+..|.|.||+....
T Consensus       261 -~~~~~~~~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS~~  303 (306)
T 3d85_D          261 -REKKDRVFTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWASV  303 (306)
T ss_dssp             -----CEEEESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCEEE
T ss_pred             -CccEEEeeccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCCCC
Confidence             2244444455566766   369999999999999888999987643

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.60  E-value=1e-14  Score=125.95  Aligned_cols=113  Identities=28%  Similarity=0.373  Sum_probs=96.7

Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEE
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV  778 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~  778 (904)
                      |.|.+|..+.++|.+.+|..+|.++++.. +.++|.|+|++|+.+..||.+.+|.|+|+..+....  . ......+.+.
T Consensus         1 G~G~~S~~v~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~--~-~~~~~~~~~~   76 (117)
T 1wj3_A            1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNV--Q-VLNTNKTSAE   76 (117)
T ss_dssp             CCCCCCCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSC--E-EEEESSSEEE
T ss_pred             CcCCCCCCEEEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCC--e-EEeCCCcEEE
Confidence            67888999999999999998999999877 888999999999766789999999999998764432  1 1112556788


Q ss_pred             ecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771         779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       779 i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P  816 (904)
                      +. |.+++.|.|+|+|+|..|.|++|+++.++|..+.|
T Consensus        77 ~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v~  113 (117)
T 1wj3_A           77 LV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSG  113 (117)
T ss_dssp             EE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCCC
T ss_pred             EE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCC
Confidence            88 99999999999999999999999999999987655

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}

Probab=99.60  E-value=1.6e-14  Score=138.76  Aligned_cols=183  Identities=15%  Similarity=0.222  Sum_probs=134.4

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE-EecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR-RIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .++|++|.+...+.. ..|.|.++...++.+ .|.|+|...+  .+... .....+.+.|.+|.+++.|.++|+|.++.|
T Consensus         2 lp~P~nv~~~s~n~~-~iL~W~pp~~~~~~v-~Y~V~y~~~~--~w~~~c~~~~~~~c~lt~l~~~~~Y~~rV~A~~~~~   77 (201)
T 3lqm_A            2 VPPPENVRMNSVNFK-NILQWESPAFAKGQL-TFTAQYLSYR--IFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFADE   77 (201)
T ss_dssp             CCCCEEEEEEEETTE-EEEEEECCCCSSSCC-EEEEEEEETT--EEEEEEEEESSSEEECTTSCSSSCEEEEEEEEETTE
T ss_pred             CCCCcccEEEEECCc-eEEEECCCCCCCCCe-EEEEEEEECC--CcccCcCccCCCEEECCCCccCCCEEEEEEEecCCC
Confidence            578999998877765 579999998766655 5999999862  33222 223457899999999999999999999888


Q ss_pred             CCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCc---------cEEEEEEEEEEccCCCCccEEEE
Q psy8771         700 EGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNG---------HIVYYKLQFVETGRSDSEASIVT  770 (904)
Q Consensus       700 ~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g---------~~~~Y~v~~~~~~~~~~~~~~~~  770 (904)
                      .|.++. ..+.........|| .+.+. ...++|.|.|.+|... .+|         .+..|.|.|...+....   ...
T Consensus        78 ~S~~s~-~~f~~~~~t~~~PP-~v~~~-~~~~si~v~w~~P~~~-~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~---~~~  150 (201)
T 3lqm_A           78 HSDWVQ-ITFSPVDDTIIGPP-GMQVE-VLADCLHMRFLAPKIE-NEYETWTMKNVYNSWTYNVQYWKQGTDEK---FQI  150 (201)
T ss_dssp             ECCCEE-EEECHHHHSBCCCC-EEEEE-EETTEEEEEEECCEEE-CSSCEEEHHHHCTTCEEEEEEEETTCCCC---EEE
T ss_pred             cCccee-eeeeecccCeeCCC-EEEEE-EeCCEEEEEEcCCCcc-CCCcccCHHHhCCceEEEEEEEECCCCcE---EEE
Confidence            787764 33432211222355 57774 4568999999998521 223         26799999988654332   121


Q ss_pred             ecCcceEEecCCCCCceEEEEEEEeeC--CCCCCCCCcEEeecCCC
Q psy8771         771 LKNQTSFVLDELKKWTEYRIWVLAGTS--IGDGPSSYPITIRTHED  814 (904)
Q Consensus       771 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~--~g~g~~s~~~~~~t~~~  814 (904)
                      ......+.|.+|+|++.|.|+|+|.+.  .|.|.+|.++.+.|.++
T Consensus       151 ~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~  196 (201)
T 3lqm_A          151 TPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD  196 (201)
T ss_dssp             CCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred             EecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence            226778999999999999999999996  68899999999998654

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=4.3e-15  Score=130.51  Aligned_cols=120  Identities=46%  Similarity=0.831  Sum_probs=104.6

Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEE
Q psy8771         464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI  543 (904)
Q Consensus       464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~  543 (904)
                      |.|.+|..+.+.|....|+.+|.++++..++.+++.|+|++|...++.+.+|.|+|+.........|........+.+.|
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i   80 (121)
T 2dlh_A            1 GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTI   80 (121)
T ss_dssp             CCCCCCSSSCSCCCCCCCCSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCCCCSSCSEECC
T ss_pred             CCCCCCCCEEEECCCcCCCCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEEecCCceEEEe
Confidence            56788888999998888888999999999999999999999988888999999999987654444555544567788999


Q ss_pred             cCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       544 ~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      .+|.|++.|.|+|+|+|..|.|.+|..+.++|..+.|.+|
T Consensus        81 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~P  120 (121)
T 2dlh_A           81 GNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGPSS  120 (121)
T ss_dssp             BSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCCSCCC
T ss_pred             cCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCCCCCC
Confidence            9999999999999999999999999999999998888776

>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A

Probab=99.59  E-value=7.2e-14  Score=144.13  Aligned_cols=230  Identities=20%  Similarity=0.254  Sum_probs=152.1

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC---C-----------CceecccccccccceEEEEeeeccCCeeeeeeeeccCCCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP---N-----------GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVR  101 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~---~-----------g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~  101 (904)
                      ....|.|...+.+.+.|.|.+....   +           +.+........+.....|...+........+.+.+     
T Consensus        21 ~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V-----   95 (284)
T 2rik_A           21 ESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGV-----   95 (284)
T ss_dssp             CCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE-----
T ss_pred             CcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEc-----
Confidence            5667777777777889999875211   1           12333333444444444555443333333444444     


Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..+|.+...+.....+.+|+.+.|.|.+.|.|.+.|.|+++ +..+....++..    ....|.|.++  +|+|.|+|.|
T Consensus        96 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a  174 (284)
T 2rik_A           96 QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKD-ETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEA  174 (284)
T ss_dssp             ECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEET-TEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred             cCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEEC-CEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEE
Confidence            45787776666547889999999999999999999999999 666666555442    4568999998  6999999999


Q ss_pred             EecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeecce
Q psy8771         176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISGII  251 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~  251 (904)
                      .|..|.....+.|.|..  .|...  ..|....+.  ....++|.+...+.+..  .+.|...+.    ...+.......
T Consensus       175 ~n~~g~~~~~~~l~V~~--~p~~~--~~~~~~~~~--~g~~v~l~C~~~g~p~~--~v~W~~~~~~~~~~~~~~~~~~~~  246 (284)
T 2rik_A          175 HNAAGSASSSTSLKVKE--PPVFR--KKPHPVETL--KGADVHLECELQGTPPF--QVSWHKDKRELRSGKKYKIMSENF  246 (284)
T ss_dssp             ECSSCEEEEEEEEEEEC--CCBCC--SCCCCEEEC--TTCCEEEEEECBSSSCC--EEEEEETTEEECBTTTEEEEEETT
T ss_pred             EcCCCceeEEEEEEEec--CCcce--eCCCcceec--CCCeEEEEEEEEecCCC--EEEEEECCEECcCCCCEEEEEcCC
Confidence            99999998888888882  11111  233344332  33456666665533332  344444321    22233333333


Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.|.++...+.+.|+|.|.|..|..
T Consensus       247 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~  274 (284)
T 2rik_A          247 LTSIHILNVDSADIGEYQCKASNDVGSY  274 (284)
T ss_dssp             EEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred             EEEEEEcCCCcccCEEEEEEEEeCCCce
Confidence            4689999999999999999999998864

>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J

Probab=99.58  E-value=7.7e-12  Score=143.70  Aligned_cols=232  Identities=11%  Similarity=0.033  Sum_probs=135.4

Q ss_pred             ccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCcccc
Q psy8771          69 TRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIEL  147 (904)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~  147 (904)
                      +...|...+.|...+...+....+.+.+     ..+|.|...+.. +.+.+|+.+.|.|.+.|.+ .+.|.|+|+++...
T Consensus        82 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V-----~~~p~~~~~~~~-~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~  155 (585)
T 2ocw_A           82 LSQDDSGRYKCGLGINSRGLSFDVSLEV-----SQGPGLLNDTKV-YTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYP  155 (585)
T ss_pred             CCcccCEEEEEEcccCCCCceEEEEEEE-----ecCccccCCCcc-EEEEcCCCEEEEEEecCCCCCccEEEEECCCCCc
Confidence            3344444445555444444444445554     567888888887 9999999999999999765 57899999843211


Q ss_pred             ----C--------CCCceee--cce-----EEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcc
Q psy8771         148 ----T--------PDDKLPV--GRN-----VLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLD  206 (904)
Q Consensus       148 ----~--------~~~~~~~--~~~-----~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~  206 (904)
                          .        ...|+.+  ++.     +|.|.++  +|+|.|+|.|.|..|.....+.|.|.       ..  +|..
T Consensus       156 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~-------~~--~p~~  226 (585)
T 2ocw_A          156 VLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVL-------KP--EPEL  226 (585)
T ss_pred             eEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEc-------cC--CCce
Confidence                0        1233332  222     7999999  69999999999999998888888887       32  2434


Q ss_pred             eEEEeecCCeEEEEEeCCCccceEEEEEEE-eCCC----------------CCCeEEeec--ceeceEEEcCCCCCCeEE
Q psy8771         207 VKISEVTATSVRLDWTYPSETLLYYVIQYK-PKAA----------------NTPYSEISG--IITTYYTVRNLSPYTEYE  267 (904)
Q Consensus       207 l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~-~~~~----------------~~~~~~~~~--~~~~~~~i~~L~p~~~Y~  267 (904)
                      +.+..  ...+.|.+.........-.+.|. ..+.                ...+.....  .....+.|.++...+.+.
T Consensus       227 ~~~~~--G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~  304 (585)
T 2ocw_A          227 VYEDL--RGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGR  304 (585)
T ss_pred             eEEcC--CCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEE
Confidence            43332  34455555543211111233332 2211                111111111  112379999999999999


Q ss_pred             EEEEEEcCCCCCC-----CCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCC
Q psy8771         268 FYIIAVNNLGRGP-----PSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETP  321 (904)
Q Consensus       268 ~~v~a~n~~g~s~-----~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~  321 (904)
                      |+|.|.|. |...     ....+.+...+. ....|..+.+..  ...+.|.+.....+
T Consensus       305 Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~-~~~~~~~~~~~~--G~~v~l~C~~~~~p  359 (585)
T 2ocw_A          305 YLCGAHSD-GQLQEGSPIQAWQLFVNEEST-IPRSPTVVKGVA--GSSVAVLCPYNRKE  359 (585)
T ss_pred             EEEEEEcC-CCccccCceeeEEEEEecccc-cccCCcceEEEe--CCcEEEEEecCCCC
Confidence            99999995 4332     112222222211 122344443333  35577777664433

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.58  E-value=1.6e-14  Score=128.60  Aligned_cols=125  Identities=21%  Similarity=0.384  Sum_probs=104.9

Q ss_pred             EEEeeCCCCCCCCCC-ceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceE-EEe
Q psy8771         457 LAAQSPRGEGATTPP-IPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWE-TQV  534 (904)
Q Consensus       457 v~a~~~~g~~~~s~~-~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~  534 (904)
                      |.|.|..|.+..+.. +.+.|....| .+|.++.+...+.+++.|+|++|...+|.+.+|.|+|+..+... ..|. ...
T Consensus         3 V~A~n~~G~g~~S~~~~~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~-~~~~~~~~   80 (130)
T 1wfo_A            3 SGSSGRIGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTA-NTATVEVL   80 (130)
T ss_dssp             CCCCCCCCCCCCCCCCSCCCCSCCCC-CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCC-SCCCEEEE
T ss_pred             eEEEecccCCCCCCCcEEEEcCCCCC-CCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCC-ceEEEEEe
Confidence            678999999998874 7888877666 68999999999999999999999888889999999999876432 2232 234


Q ss_pred             ecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         535 VDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       535 ~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      ....+.+.|.+|.|++.|.|+|+|.|..|.|.+|..+.++|....|+.|
T Consensus        81 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp~p  129 (130)
T 1wfo_A           81 APSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSGPSS  129 (130)
T ss_dssp             CTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCCCCC
T ss_pred             CCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCCCCC
Confidence            4678889999999999999999999999999999988899887766544

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.57  E-value=1.5e-14  Score=127.44  Aligned_cols=119  Identities=26%  Similarity=0.359  Sum_probs=104.1

Q ss_pred             EEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEE
Q psy8771         456 WLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQ  533 (904)
Q Consensus       456 ~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~  533 (904)
                      +|.|.|..|.+..+..+.+.|....|..+|.++++...+.+++.|+|++|..  .++.+.+|.|+|+.....   .|...
T Consensus         3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~---~~~~~   79 (124)
T 2ed9_A            3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRR---GEMET   79 (124)
T ss_dssp             SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSS---CCEEE
T ss_pred             eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCC---cceEE
Confidence            5789999999999999999998888877899999999999999999999876  678999999999987643   33344


Q ss_pred             eecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCC
Q psy8771         534 VVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ  577 (904)
Q Consensus       534 ~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~  577 (904)
                      .....+.+.|.+|.|++.|.|+|+|.|..|.|++|..+.++|..
T Consensus        80 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e  123 (124)
T 2ed9_A           80 LEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE  123 (124)
T ss_dssp             ECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred             ecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence            55677889999999999999999999999999999999998854

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.57  E-value=5.8e-14  Score=122.49  Aligned_cols=116  Identities=26%  Similarity=0.383  Sum_probs=97.6

Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEE-EeecCceEEE
Q psy8771         464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWET-QVVDNNQLTT  542 (904)
Q Consensus       464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~  542 (904)
                      |.+..|..+.+.|....|+.+|.++++...+.+++.|+|++|..  +.+.+|.|+|+..+... ..+.. ......+.+.
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~--g~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~~   77 (119)
T 2ee2_A            1 GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLE--KIVESYQIRYWAAHDKE-EAANRVQVTSQEYSAR   77 (119)
T ss_dssp             CCCCCSSCCCCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCSC--TTCCEEEEEEEESSSCG-GGCEEEEEETTCSEEE
T ss_pred             CCCCCCCCEEEECCCcCCCCCCCcEEEEEccCCEEEEEecCCCC--CccceEEEEEEECCCcc-cCcEEEEcCCCEeEEE
Confidence            56778888899999989988999999999999999999999876  78999999998875432 22333 3335667899


Q ss_pred             EcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCC
Q psy8771         543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ  582 (904)
Q Consensus       543 ~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~  582 (904)
                      |.+|.|++.|.|+|+|+|..|.|++|..+.++|...+|++
T Consensus        78 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp~  117 (119)
T 2ee2_A           78 LENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASGPS  117 (119)
T ss_dssp             ECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCCSC
T ss_pred             ECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCCCC
Confidence            9999999999999999999999999999999998766553

>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O

Probab=99.57  E-value=1.2e-14  Score=123.14  Aligned_cols=88  Identities=30%  Similarity=0.527  Sum_probs=79.7

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..||.|+..|.+ +.+.+|+++.|.|.+.|.|.|.|+|+|+ +..+..+.++.+    ....|.|.++  +|+|.|+|.|
T Consensus        11 ~~pP~f~~~p~~-~~v~~G~~~~l~C~~~G~P~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a   88 (107)
T 3knb_B           11 GSPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKG-GQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRA   88 (107)
T ss_dssp             CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred             CCCCEEEeCCCc-EEEeCCCcEEEEEEEEEecCCEEEEEEC-cccccceeeEEEeecCceEEEEEecCChhhCEEEEEEE
Confidence            568999999998 9999999999999999999999999999 888887777765    2347999999  6999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                      .|..|..+.++.|.|.
T Consensus        89 ~N~~G~~~~~~~l~V~  104 (107)
T 3knb_B           89 RNAAGEAYAAAAVTVL  104 (107)
T ss_dssp             EETTEEEEEEEEEEEE
T ss_pred             EECCCEEEEEEEEEEE
Confidence            9999999999999998

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*

Probab=99.56  E-value=2.5e-14  Score=154.51  Aligned_cols=220  Identities=11%  Similarity=0.162  Sum_probs=137.4

Q ss_pred             CceEEEEeCCC------------CCCCceecccccccccceEEEEeeeccCCeeee---eeeecc--CCCCCCCCeEEc-
Q psy8771          48 STMVIQWDEPE------------TPNGQITHPPTRAARSHARLAAQSVLRRGRLAH---AVRQVA--DPVRRVPPQFSI-  109 (904)
Q Consensus        48 ~s~~v~W~~~~------------~~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~v~--~~~~~~~P~~~~-  109 (904)
                      +.+.+.|.+..            ..+|.+........|...+.|...+........   ..+.+.  ......+|.+.. 
T Consensus       131 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~  210 (384)
T 3kld_A          131 GELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQ  210 (384)
T ss_dssp             SCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEE
T ss_pred             CCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeec
Confidence            45789996542            123445444455556566666655544332210   111111  011223454443 


Q ss_pred             CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      .|.. +.+.+|+.+.|.|.+.|.|.|.|.|+|+++..+....+....++.|.|.++  +|+|.|+|.|.|..|.....+.
T Consensus       211 ~~~~-~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~  289 (384)
T 3kld_A          211 FPET-VPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQ  289 (384)
T ss_dssp             CCSE-EEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred             CCCc-eEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEE
Confidence            3444 889999999999999999999999999656666655555556789999999  6999999999999999998889


Q ss_pred             EEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeecceeceEEEcCCCCC
Q psy8771         188 VKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISGIITTYYTVRNLSPY  263 (904)
Q Consensus       188 l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~~~~~~i~~L~p~  263 (904)
                      |.|....  .+  ...+.+..+.  ....+.|.+...+.+...  +.|...+.    ...+.    .....+.|.++...
T Consensus       290 l~v~~~P--~~--~~~~~~~~v~--~g~~v~l~C~~~g~P~p~--i~W~k~g~~l~~~~~~~----~~~~~L~i~~v~~~  357 (384)
T 3kld_A          290 LTFYAQP--NW--VQIINDIHVA--MEESVFWECKANGRPKPT--YRWLKNGDPLLTRDRIQ----IEQGTLNITIVNLS  357 (384)
T ss_dssp             EEEEEEE--EE--EECCCCEEEC--TTCCEEEECEEEEESCCE--EEEEETTEECCCBTTEE----EETTEEEESSCCGG
T ss_pred             EEEecCC--cc--ccCCCceEec--CCCCEEEEeECCccCCCe--EEEEECCEECCCCccEE----EeCCEEEEeecChh
Confidence            9887321  10  0123333332  234455555443222222  33433321    11111    12357999999999


Q ss_pred             CeEEEEEEEEcCCCCCC
Q psy8771         264 TEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       264 ~~Y~~~v~a~n~~g~s~  280 (904)
                      +.+.|+|.|.|..|...
T Consensus       358 D~G~Y~C~A~N~~G~~~  374 (384)
T 3kld_A          358 DAGMYQCVAENKHGVIF  374 (384)
T ss_dssp             GCEEEEEEEEETTEEEE
T ss_pred             hCEEEEEEEEeCCceEE
Confidence            99999999999998654

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.56  E-value=7.6e-15  Score=128.88  Aligned_cols=117  Identities=28%  Similarity=0.447  Sum_probs=98.8

Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCc-cEEEEecCcceE
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE-ASIVTLKNQTSF  777 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~  777 (904)
                      |.|.+|..+.++|.+..|..+|.++++...+.+++.|+|++|  ...+|.+.+|.|+|+........ .........+.+
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~   78 (121)
T 2dlh_A            1 GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEP--EEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQIT   78 (121)
T ss_dssp             CCCCCCSSSCSCCCCCCCCSCCEEEEECCCSSSBCCEEEECC--SCCCSCEEEEEEECCSCTTSCTTTSCCCCCSSCSEE
T ss_pred             CCCCCCCCEEEECCCcCCCCCCcccEEEecCCCEEEEEECCC--CCCCCcEeEEEEEEEeCCCCCccccEEEecCCceEE
Confidence            678889999999999999878999999999999999999998  46789999999999876432211 111112277889


Q ss_pred             EecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771         778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~  817 (904)
                      .|.+|+|++.|.|+|+|.|..|.|++|+.+.++|.+++|+
T Consensus        79 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~  118 (121)
T 2dlh_A           79 TIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGP  118 (121)
T ss_dssp             CCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCCSC
T ss_pred             EecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCCCC
Confidence            9999999999999999999999999999999999988875

>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J

Probab=99.55  E-value=8.7e-11  Score=134.88  Aligned_cols=192  Identities=9%  Similarity=0.064  Sum_probs=115.1

Q ss_pred             CCCCceEEecCCCeEEEEEEccCCCC---eEEEeeCCccc----c-C--------CCCceeec------ceEEEEeee--
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSPMP---FVKWRKGQNIE----L-T--------PDDKLPVG------RNVLTLDRV--  165 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p~p---~i~W~k~~~~~----~-~--------~~~~~~~~------~~~l~i~~l--  165 (904)
                      .|.+ +.+.+|+.++|.|.+.|.|.+   .|.|+|++...    + .        ...|+.+.      ...|.|.++  
T Consensus         6 ~P~~-v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~   84 (585)
T 2ocw_A            6 GPEE-VNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQ   84 (585)
T ss_pred             Ccce-eEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCc
Confidence            4455 899999999999999999765   79999983311    1 0        12344432      236999998  


Q ss_pred             cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC----
Q psy8771         166 TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN----  241 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~----  241 (904)
                      +|+|.|+|.|.|..|..+..+.|.|..  .|.+  ...|..+.+...  ..++|.+...+.+.. ..+.|...+..    
T Consensus        85 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~--~p~~--~~~~~~~~v~~G--~~v~l~C~~~~~~~~-~~v~W~k~~~~~~~~  157 (585)
T 2ocw_A           85 DDSGRYKCGLGINSRGLSFDVSLEVSQ--GPGL--LNDTKVYTVDLG--RTVTINCPFKTENAQ-KRKSLYKQIGLYPVL  157 (585)
T ss_pred             ccCEEEEEEcccCCCCceEEEEEEEec--Cccc--cCCCccEEEEcC--CCEEEEEEecCCCCC-ccEEEEECCCCCceE
Confidence            699999999999998888888888872  1211  223444444333  345555554422111 12333332211    


Q ss_pred             -------------CCeEEeecc---eeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecc
Q psy8771         242 -------------TPYSEISGI---ITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRP  305 (904)
Q Consensus       242 -------------~~~~~~~~~---~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~  305 (904)
                                   .........   ....|.|.+++..+.+.|+|.|.|..|.......+.+.  .    .+|..+.+. 
T Consensus       158 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~--~----~~p~~~~~~-  230 (585)
T 2ocw_A          158 VIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVL--K----PEPELVYED-  230 (585)
T ss_pred             EecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEc--c----CCCceeEEc-
Confidence                         111111111   12379999999999999999999988864333333332  1    123333332 


Q ss_pred             cCCCeeEEEecC
Q psy8771         306 LSSSTMVIQWDE  317 (904)
Q Consensus       306 ~~~~~v~l~W~~  317 (904)
                       ....+.|.+..
T Consensus       231 -~G~~v~l~C~~  241 (585)
T 2ocw_A          231 -LRGSVTFHCAL  241 (585)
T ss_pred             -CCCcEEEEEEc
Confidence             34556677663

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A

Probab=99.55  E-value=5.2e-14  Score=138.89  Aligned_cols=187  Identities=17%  Similarity=0.223  Sum_probs=127.5

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCc-eeeEEEEEEeCCccc---cceEE------ecccceEEEeCCCCCcEEE
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGEN-IISYELYWNDTYAKA---KHHRR------IGLVETYSLTGLYPNTLYY  689 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~-~~~y~v~~~~~~~~~---~~~~~------~~~~~~~~l~~L~p~t~Y~  689 (904)
                      +|..|+++........+++++|.+....+.. ...|.+.|+......   .....      ......+...+|.+++.|.
T Consensus        29 pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~~Y~  108 (236)
T 1axi_B           29 SSGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPYC  108 (236)
T ss_dssp             ---CCCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEEE
T ss_pred             CCCCCcCCeEEeCCCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccceEE
Confidence            5678899988778899999999975543332 258999987654321   11111      1122356667899999999


Q ss_pred             EEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcE--EEecCC----CEEEEEecCCCCC-CCCc-cEEEEEEEEEEccC
Q psy8771         690 IWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVS--CEPLSS----TSIRISWEPPPVE-RSNG-HIVYYKLQFVETGR  761 (904)
Q Consensus       690 v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~--~~~~~~----~~v~l~W~~~~~~-~~~g-~~~~Y~v~~~~~~~  761 (904)
                      |+|.| | .+   .+....+.....+.+.||.++.  +...+.    ..+.|+|++|... ..+| .+..|+|+|+..+.
T Consensus       109 ~~V~a-N-~~---~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~  183 (236)
T 1axi_B          109 IKLTS-N-GG---TVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNE  183 (236)
T ss_dssp             EEEEE-T-TE---EEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTC
T ss_pred             EEEEE-C-Cc---cCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCC
Confidence            99999 8 22   2334555555555556889995  444332    3599999999532 3356 68999999999865


Q ss_pred             CCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCC--CCCCCCcEEeecCC
Q psy8771         762 SDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIG--DGPSSYPITIRTHE  813 (904)
Q Consensus       762 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g--~g~~s~~~~~~t~~  813 (904)
                      ..+  ........+.+.|.+|+||+.|.|+|||.+..|  .|++|.++.++|+.
T Consensus       184 ~~w--~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p~  235 (236)
T 1axi_B          184 TKW--KMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLPQ  235 (236)
T ss_dssp             SSC--EECCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCCC
T ss_pred             Cce--EEEeccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECCC
Confidence            433  222222668999999999999999999999988  89999999998854

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.55  E-value=1e-14  Score=130.27  Aligned_cols=115  Identities=34%  Similarity=0.510  Sum_probs=98.1

Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceE
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSF  777 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~  777 (904)
                      |.|.+|..+.++|.+.+|..+|.++++...+.+++.|+|++|..+..+|.+.+|.|+|+..+...+ .....+. ..+.+
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~   79 (132)
T 1x5h_A            1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSD-VTETLVSGTQLSQ   79 (132)
T ss_dssp             CCCCCCCCCCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEE-EECCBCCTTCCEE
T ss_pred             CcCCCCCCEEEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCc-cEEEEeCCCccEE
Confidence            678889999999999999988999999999999999999999654478999999999998653221 1111133 78899


Q ss_pred             EecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      +|.+|++++.|.|+|+|.|..|.|++|..+.++|...
T Consensus        80 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~  116 (132)
T 1x5h_A           80 LIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES  116 (132)
T ss_dssp             EEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred             EeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence            9999999999999999999999999999999999874

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.54  E-value=6.3e-14  Score=123.09  Aligned_cols=115  Identities=26%  Similarity=0.355  Sum_probs=96.7

Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCeEEE-ecCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEeecCceE
Q psy8771         464 GEGATTPPIPVRTKQYEPGTAPRDVQVR-PLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL  540 (904)
Q Consensus       464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~-~~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~  540 (904)
                      |.|.+|..+.+.|.+..|..+|.++++. ..+.++|.|+|++|  ...+|.+.+|+|+|+.........|........+.
T Consensus         1 G~g~~S~~v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~   80 (124)
T 2dbj_A            1 GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSR   80 (124)
T ss_dssp             CCSCCCCCCCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEEEESTTSC
T ss_pred             CcCCCCCCEEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEEeCCCcce
Confidence            5677888899999998898899999998 58889999999998  66788999999999754322224454444567788


Q ss_pred             EEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCC
Q psy8771         541 TTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQG  578 (904)
Q Consensus       541 ~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~  578 (904)
                      +.|.+|.+++.|.|+|+|+|..|.|++|..+.+.|...
T Consensus        81 ~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~  118 (124)
T 2dbj_A           81 ARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH  118 (124)
T ss_dssp             EEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred             EEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence            99999999999999999999999999999999998654

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.54  E-value=2.2e-14  Score=124.55  Aligned_cols=115  Identities=38%  Similarity=0.587  Sum_probs=98.9

Q ss_pred             CCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771         563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS  642 (904)
Q Consensus       563 g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~  642 (904)
                      |.|+.|..+.+.|....|.+|.++++...+.+++.|+|.++..                                     
T Consensus         1 G~g~~S~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~-------------------------------------   43 (115)
T 1x5z_A            1 GSSGSSGDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRS-------------------------------------   43 (115)
T ss_dssp             CCCCCCCCCCCCCCSCCCCCCEEEEEECSSSSEEEEEEECCSC-------------------------------------
T ss_pred             CCCCCCCCEEEECCCCCCCCCccCEeeeCCCCEEEEEEcCCCC-------------------------------------
Confidence            5678888899999988999999999999999999999999852                                     


Q ss_pred             CCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCC
Q psy8771         643 KPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP  720 (904)
Q Consensus       643 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P  720 (904)
                            +.+.+|.|+|+..+...+..........+.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|...+|..||
T Consensus        44 ------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~pp  115 (115)
T 1x5z_A           44 ------DTIANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSSGPSSG  115 (115)
T ss_dssp             ------CCCCEEEECBEESSSCCCBCCEECSSSEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCCCCCCC
T ss_pred             ------CCccEEEEEEEeCCCCCceEEecCCCcEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCCCCCCC
Confidence                  368899999988766555444445568999999999999999999999999999999999999998887654

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.54  E-value=9.9e-14  Score=120.86  Aligned_cols=117  Identities=16%  Similarity=0.282  Sum_probs=99.7

Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEE
Q psy8771         464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI  543 (904)
Q Consensus       464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~  543 (904)
                      |.|..|..+.+.|....| .+|.++.+...+.+++.|+|.+|.+.++.+.+|.|+|+.....  ..|........+.+.+
T Consensus         1 G~s~~S~~~~~~t~~~~P-~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~v   77 (118)
T 1x3d_A            1 GSSGSSGAEIFTTLSCEP-DIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN--GEFCQCYMGSQKQFKI   77 (118)
T ss_dssp             CCCCCCCCCCCCCCCSCC-CCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSS--SCCEEEEEESCSEEEE
T ss_pred             CCCCCCcCEEEEcCCCCC-cCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCC--CCeEEeeccCCcEEEe
Confidence            567778888888877655 7889999999999999999999987777999999999876532  4676666666688999


Q ss_pred             cCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       544 ~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      .+|.|++.|.|+|+|+|..|.|.+|..+.+.|....|.+|
T Consensus        78 ~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P~~P  117 (118)
T 1x3d_A           78 TKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSGPSS  117 (118)
T ss_dssp             ESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCCCCCC
T ss_pred             CCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCCCccC
Confidence            9999999999999999999999999999999988777665

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.53  E-value=3.1e-14  Score=125.74  Aligned_cols=114  Identities=25%  Similarity=0.416  Sum_probs=96.3

Q ss_pred             CCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCC------ccEEEEec-Ccce
Q psy8771         704 TPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS------EASIVTLK-NQTS  776 (904)
Q Consensus       704 s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~------~~~~~~~~-~~~~  776 (904)
                      |..+.++|.+..|..+|.++++...+.+++.|+|++|.....||.+.+|.|+|+..+....      ......+. ..+.
T Consensus         2 S~~v~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
T 1uen_A            2 SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTH   81 (125)
T ss_dssp             CCCCCCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSE
T ss_pred             CccEEEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccE
Confidence            4567889999999888999999999999999999999544568899999999998764332      11233344 7899


Q ss_pred             EEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771         777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       777 ~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~  817 (904)
                      +.|.+|+|++.|.|+|+|+|..|.|++|.++.++|.++.|.
T Consensus        82 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~  122 (125)
T 1uen_A           82 GMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP  122 (125)
T ss_dssp             EEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSS
T ss_pred             EEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCCCC
Confidence            99999999999999999999999999999999999988874

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.52  E-value=8.5e-14  Score=121.28  Aligned_cols=115  Identities=19%  Similarity=0.304  Sum_probs=96.0

Q ss_pred             CCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771         563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS  642 (904)
Q Consensus       563 g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~  642 (904)
                      |.|.+|..+.+.|....|.+|.++++...+.+++.|+|.++.+                                     
T Consensus         1 G~s~~S~~~~~~t~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~-------------------------------------   43 (118)
T 1x3d_A            1 GSSGSSGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSD-------------------------------------   43 (118)
T ss_dssp             CCCCCCCCCCCCCCCSCCCCCCCCEEEEEETTEEEEECCCCCC-------------------------------------
T ss_pred             CCCCCCcCEEEEcCCCCCcCCCCcEEeccCCCEEEEEECCCCC-------------------------------------
Confidence            5677888888999888999999999999999999999999865                                     


Q ss_pred             CCCCCCCceeeEEEEEEeCCc-cccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC
Q psy8771         643 KPTHSGENIISYELYWNDTYA-KAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA  718 (904)
Q Consensus       643 ~~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~  718 (904)
                          +++.+.+|.|+|+.... ..+..........+++.+|+|++.|.|+|+|+|..|.|.+|..+.+.|...+|..
T Consensus        44 ----~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P~~  116 (118)
T 1x3d_A           44 ----NGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSGPS  116 (118)
T ss_dssp             ----CSSCEEEEEEEECTTTSSSCCEEEEEESCSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCCCCC
T ss_pred             ----CCCcceEEEEEEecCCCCCCeEEeeccCCcEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCCCcc
Confidence                45667888888876654 3344444455689999999999999999999999999999999999998877763

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}

Probab=99.52  E-value=6.7e-13  Score=148.41  Aligned_cols=180  Identities=9%  Similarity=-0.003  Sum_probs=118.7

Q ss_pred             CcceeeeccceEEE-----EecCCCCCcceeeEeeCCCCCCCCcEEEec-cCCceEEEEeCCCCCC--C-----------
Q psy8771           2 DTRCYVESPEEVFI-----ILCPLPPLIPGYILVTEPGTAPRDVQVRPL-SSSTMVIQWDEPETPN--G-----------   62 (904)
Q Consensus         2 ~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~p~~~p~~l~~~~~-~~~s~~v~W~~~~~~~--g-----------   62 (904)
                      .|+|.|.+......     +-...+|..+-. ......+....|.|... +.+.+.|+|.+....-  +           
T Consensus       205 ~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~p~-~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~  283 (527)
T 3qs9_E          205 DIRCCARNELGRECTRLFTIDLNQTPQTTLP-QLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTN  283 (527)
T ss_dssp             CEEEEEECSSCEEEEECEEEESSSCCCCSCC-EEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETT
T ss_pred             EEEEEEEeCCCcccceEEEEEEeccCccCCC-ceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccC
Confidence            58999997755432     222233333221 22222347778888886 8899999998875431  1           


Q ss_pred             -------ceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCC-CceEEecCCCeEEEEEEccCCC
Q psy8771          63 -------QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPP-ALLEVMLDSPLNLSCVAVGSPM  134 (904)
Q Consensus        63 -------~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~  134 (904)
                             .+........|...+.|...+.   ....+.+.|     ..+|.+...+. ..+.+.+|+.+.|.|.+.|.|.
T Consensus       284 ~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V-----~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~  355 (527)
T 3qs9_E          284 RTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTI-----VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQ  355 (527)
T ss_dssp             TEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEE-----C--CEEECCCSCCEECCCTTCCCCEEEEEEEESC
T ss_pred             cceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEE-----EccCccccccCcccEEEcCCCeEEEEEEEEecCC
Confidence                   0222223333444444444433   344445554     34566655442 2377889999999999999999


Q ss_pred             CeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         135 PFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       135 p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|+|+|+ +..+....+...+++.|.|.++  +|+|.|+|.|.|..|.....+.|.|.
T Consensus       356 p~i~W~k~-g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~  413 (527)
T 3qs9_E          356 IRCTWTFS-RKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR  413 (527)
T ss_dssp             CEEEEEET-TEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--
T ss_pred             CEEEEEEC-CEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence            99999999 7777665555557789999999  69999999999999999888888887

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*

Probab=99.51  E-value=6.3e-13  Score=150.35  Aligned_cols=328  Identities=12%  Similarity=0.072  Sum_probs=176.1

Q ss_pred             CCCCcEEEeccCCceEEEEeCC-CC-----------CCCceecccccccccc-eEEEEeeeccCCeee-eeeeeccCCCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEP-ET-----------PNGQITHPPTRAARSH-ARLAAQSVLRRGRLA-HAVRQVADPVR  101 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~-~~-----------~~g~i~~~~~~~~~~~-~~~~~~~~~~~g~~~-~~~~~v~~~~~  101 (904)
                      ....|.|...+.+.+.|.|.+. ..           .++.+........+.. ...|...+......+ .+.+.+.. ..
T Consensus       130 ~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~-~~  208 (524)
T 2ec8_A          130 NDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRP-AF  208 (524)
T ss_dssp             SCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEEC-CC
T ss_pred             CeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEe-CC
Confidence            4555666665655689999652 11           1233333334445555 555555443222222 34444431 12


Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccc--cCCCCce-------eecceEEEEeee--cCCe
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIE--LTPDDKL-------PVGRNVLTLDRV--TESE  169 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~--~~~~~~~-------~~~~~~l~i~~l--~d~g  169 (904)
                      ..+|.|...+.+ ..+.+|+.+.|.|.+.|.|.|. |.|+|+ +..  +....+.       ....+.|.|.++  +|+|
T Consensus       209 ~~~p~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G  286 (524)
T 2ec8_A          209 KAVPVVSVSKAS-YLLREGEEFTVTCTIKDVSSSVYSTWKRE-NSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSG  286 (524)
T ss_dssp             CSCCEEECSCSE-EEEETTSCEEEEEEEEESSTTCEEEEEET-TCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCE
T ss_pred             CCCCcEEecCCc-ceEEcCCcEEEEEEEecCCCcEEEEEEeC-CCCCccccccccccccCCccceEEEEEECCCCHHHCE
Confidence            578999998888 8999999999999999999987 999999 544  2222221       224678999999  6999


Q ss_pred             EEEEEEEecCcceEEEEEEEEEeecCCCCC-CCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCC-----C
Q psy8771         170 NYTCIAASVLGVIETSTIVKVQCKYAPLLT-LPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT-----P  243 (904)
Q Consensus       170 ~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~-~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~-----~  243 (904)
                      .|+|.|.|..|.....+.|.|..  .|... .|..+....+  .....++|.+...+.+... .+.|...+...     .
T Consensus       287 ~Y~C~a~n~~g~~~~~~~l~V~~--~p~~~~~~~~~~~~~v--~~G~~v~l~C~~~g~P~p~-~v~W~k~g~~~~~~~~~  361 (524)
T 2ec8_A          287 VFMCYANNTFGSANVTTTLEVVD--KGFINIFPMINTTVFV--NDGENVDLIVEYEAFPKPE-HQQWIYMNRTFTDKWED  361 (524)
T ss_dssp             EEEEEEECSSCEEEEEEEEEEES--SCEEEEEESSCSEEEE--CTTCCEEEEEEEEEESCCC-EEEEESSSCBCSSSBCC
T ss_pred             EEEEEEEecCCceEEEEEEEEec--cCceEeecCCCceEEE--cCCCcEEEEEEEeecCCCc-EEEEEECCeeccCCccc
Confidence            99999999999998888888871  11110 0111122322  2334456666543222221 24454432211     1


Q ss_pred             eEEeecc----eeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCC---CCCCCCCceEecccCCCeeEEEec
Q psy8771         244 YSEISGI----ITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET---EPGTAPRDVQVRPLSSSTMVIQWD  316 (904)
Q Consensus       244 ~~~~~~~----~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~---~p~~~p~~l~~~~~~~~~v~l~W~  316 (904)
                      +......    ....+.|.++...+.+.|+|.|.|..|....+..+.+...+.   .+......|.+...+.....+.|.
T Consensus       362 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~~~~g~l~C~~~g~P~p~i~W~  441 (524)
T 2ec8_A          362 YPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTIDWY  441 (524)
T ss_dssp             EESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEECCSSSCEEEEEEEESCCEEECC
T ss_pred             eeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEeecccCcCcEEEEEEEeecCCEEEEE
Confidence            1111111    346899999999999999999999998743222222211110   000011155565555555678887


Q ss_pred             CCCCCC-----------ceeeEEEEEeecee-EEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcce
Q psy8771         317 EPETPN-----------GQITAKHHRRIGLV-ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPV  371 (904)
Q Consensus       317 ~p~~~~-----------~~~~~~~~~~~~~~-~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~  371 (904)
                      ......           .....+.....+.. ....+........-.+++.|.|..|....+..+.+
T Consensus       442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V  508 (524)
T 2ec8_A          442 FCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAF  508 (524)
T ss_dssp             CC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC
T ss_pred             ECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEE
Confidence            642211           00000000001111 11123333335566777888998887555443333

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.50  E-value=7e-14  Score=122.86  Aligned_cols=114  Identities=33%  Similarity=0.560  Sum_probs=95.5

Q ss_pred             CCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCc-cEEEE--ec-CcceEEe
Q psy8771         704 TPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE-ASIVT--LK-NQTSFVL  779 (904)
Q Consensus       704 s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~-~~~~~--~~-~~~~~~i  779 (904)
                      |..+.++|.+..|..+|.++++...+.+++.|+|++|..+..+|.+.+|.|+|+..+...+. .....  .. ..+.+.|
T Consensus         3 S~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   82 (122)
T 1va9_A            3 SGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTL   82 (122)
T ss_dssp             CCCCSSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEE
T ss_pred             CCCEEEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEe
Confidence            55678889999998789999999999999999999996544789999999999987643221 11111  12 5689999


Q ss_pred             cCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771         780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       780 ~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~  817 (904)
                      .+|+|++.|.|+|+|.|..|.|++|..+.++|..++|+
T Consensus        83 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~  120 (122)
T 1va9_A           83 DNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPS  120 (122)
T ss_dssp             ESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSCCC
T ss_pred             CCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCCCC
Confidence            99999999999999999999999999999999998885

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.50  E-value=9.5e-14  Score=123.92  Aligned_cols=121  Identities=30%  Similarity=0.468  Sum_probs=102.2

Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEE--eecCce
Q psy8771         464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQ--VVDNNQ  539 (904)
Q Consensus       464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~  539 (904)
                      |.|.+|..+.++|....|..+|.++++...+.+++.|+|++|..  .++.+.+|.|+|+....   ..|...  .....+
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~   77 (132)
T 1x5h_A            1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASR---KSDVTETLVSGTQL   77 (132)
T ss_dssp             CCCCCCCCCCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTE---EEEEECCBCCTTCC
T ss_pred             CcCCCCCCEEEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCC---CCccEEEEeCCCcc
Confidence            56778888999999888877899999999999999999999876  67899999999998653   222222  335678


Q ss_pred             EEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCC------CCCCCCCce
Q psy8771         540 LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQG------VPSQPRDLR  587 (904)
Q Consensus       540 ~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~------~p~~p~~~~  587 (904)
                      ++.|.+|.|++.|.|+|+|+|..|.|.+|..+.++|...      .|.+|..|.
T Consensus        78 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~~~~~~P~~P~~ls  131 (132)
T 1x5h_A           78 SQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVSGPSS  131 (132)
T ss_dssp             EEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSCCCCCCCCCCCCCCC
T ss_pred             EEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcccCCcccCCCCCCCCC
Confidence            899999999999999999999999999999999999875      788887764

>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}

Probab=99.50  E-value=7.6e-13  Score=147.95  Aligned_cols=258  Identities=11%  Similarity=0.069  Sum_probs=144.4

Q ss_pred             CcceeeeccceEEEEecC--CCC---CcceeeEeeCCCCCCCCcEEEeccCCceEEEEeCCCCC--------CCceec--
Q psy8771           2 DTRCYVESPEEVFIILCP--LPP---LIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETP--------NGQITH--   66 (904)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~--~~p---~~~~~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~~--------~g~i~~--   66 (904)
                      .|.|.+.++...+.+...  ..|   ..+..-...... ....|.|...+.+.+.|.|......        .+.+..  
T Consensus       117 ~Y~C~~~n~~~~~~~~~~v~v~~~~~~~~~~p~~~~~~-~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~  195 (527)
T 3qs9_E          117 EYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKME-NQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEE  195 (527)
T ss_dssp             EEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECS-SSSCEEEEEEESSCCEEEEEEC-------------CEEECC
T ss_pred             eEEEEEEeccccEEEEEEEEECCceeeccCCCcEEecC-CceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEee
Confidence            589999998776544322  111   111111111112 4557899999999999999764322        111221  


Q ss_pred             ccccccccceEEEEeeeccCCeeee-eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCc
Q psy8771          67 PPTRAARSHARLAAQSVLRRGRLAH-AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQN  144 (904)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~  144 (904)
                      ..+...+...+.|...+..+..... +.+.+     ..+|.+  +|.+ +.+.+|+.+.|.|.+. |.|.|.|+|+|+ +
T Consensus       196 ~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V-----~~~p~~--~p~~-~~v~~G~~v~L~C~~~~g~p~p~i~W~k~-g  266 (527)
T 3qs9_E          196 KVLHELFGTDIRCCARNELGRECTRLFTIDL-----NQTPQT--TLPQ-LFLKVGEPLWIRCKAVHVNHGFGLTWELE-N  266 (527)
T ss_dssp             SEECCCCSSCEEEEEECSSCEEEEECEEEES-----SSCCCC--SCCE-EEECTTSCEEEEEEEEESSSCCCEEEECS-S
T ss_pred             eeccccCCEEEEEEEEeCCCcccceEEEEEE-----eccCcc--CCCc-eEEeCCCeEEEEEEEccCCCCeEEEEEEC-C
Confidence            1223334444555554433332222 34444     344544  4445 8999999999999997 999999999999 6


Q ss_pred             cccCCCCce----------eecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEee
Q psy8771         145 IELTPDDKL----------PVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEV  212 (904)
Q Consensus       145 ~~~~~~~~~----------~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~  212 (904)
                      ..+.....+          ....+.|.|.++  +|+|.|+|.|.|.   .+..+.|.|...  +..........+.+.  
T Consensus       267 ~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~--p~i~~~~~~~~~~v~--  339 (527)
T 3qs9_E          267 KALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEK--GFINATNSSEDYEID--  339 (527)
T ss_dssp             SCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC----CEEECCCSCCEECCC--
T ss_pred             EECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEcc--CccccccCcccEEEc--
Confidence            655443222          223456999998  6999999999997   567777777621  111111111112222  


Q ss_pred             cCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE--eecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         213 TATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE--ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       213 ~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ....+.|.+...+.+..  .|.|...+.  ....  ........+.|.++...+.+.|+|.|.|..|...
T Consensus       340 ~G~~v~L~C~~~g~P~p--~i~W~k~g~--~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~  405 (527)
T 3qs9_E          340 QYEEFCFSVRFKAYPQI--RCTWTFSRK--SFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFT  405 (527)
T ss_dssp             TTCCCCEEEEEEEESCC--EEEEEETTE--EEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEE
T ss_pred             CCCeEEEEEEEEecCCC--EEEEEECCE--ECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEE
Confidence            22333344433222221  134443311  0000  0011235789999999999999999999988643

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A

Probab=99.50  E-value=1.7e-13  Score=135.26  Aligned_cols=191  Identities=14%  Similarity=0.223  Sum_probs=125.4

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCc-eeeEEEEEEeCCCCC-CcceEEEee-----cCceEEEEcCCCCCCeE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLP-MSAWETQVV-----DNNQLTTISDLTPHTIY  552 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~-i~~Y~v~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~L~p~t~Y  552 (904)
                      .||..|.++.....+.+++.++|+++...+.. ...|.|.|....... ...+..-..     .....+...+|.+.+.|
T Consensus        28 ~pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~~Y  107 (236)
T 1axi_B           28 NSSGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPY  107 (236)
T ss_dssp             ----CCCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEE
T ss_pred             CCCCCCcCCeEEeCCCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccceE
Confidence            46788999988888889999999975543222 258999887654211 011222111     12234556789999999


Q ss_pred             EEEEEEEeCCCCCCCCCcEEEec-CCCCCCCCCCce--EEecCC----CeEEEEEeCCCCCCCCceEEEEEeccCCCCCc
Q psy8771         553 TIRVQAFTSVGPGPLSAPVLVKT-QQGVPSQPRDLR--AVDIQE----TAVTLAWSKPTHSGENIISYELYWNDTYAKPR  625 (904)
Q Consensus       553 ~~~V~a~~~~g~~~~S~~~~~~t-~~~~p~~p~~~~--~~~~~~----~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~  625 (904)
                      .|+|.| | .+   .+....+.. ....|.+|.++.  +...+.    ..+.|+|.+|...                   
T Consensus       108 ~~~V~a-N-~~---~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~-------------------  163 (236)
T 1axi_B          108 CIKLTS-N-GG---TVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNA-------------------  163 (236)
T ss_dssp             EEEEEE-T-TE---EEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTS-------------------
T ss_pred             EEEEEE-C-Cc---cCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCc-------------------
Confidence            999999 7 22   344444443 334577888885  444333    2499999988531                   


Q ss_pred             ceEEEeeccceEEEeccCCCCCCC-ceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC--CCC
Q psy8771         626 DLRAVDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG--EGA  702 (904)
Q Consensus       626 ~l~~~~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G--~~~  702 (904)
                                         ...++ .+..|.|+|+..+...+........+++.|.+|+|++.|.|+|+|....|  .|+
T Consensus       164 -------------------~~~~g~~~l~Yevry~~~~~~~w~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~  224 (236)
T 1axi_B          164 -------------------DIQKGWMVLEYELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGE  224 (236)
T ss_dssp             -------------------CTTTTSCCEEEEEEEEETTCSSCEECCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCC
T ss_pred             -------------------cccCCceeeEEEEEEEECCCCceEEEeccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCC
Confidence                               00133 57899999999876555444444568999999999999999999999888  789


Q ss_pred             CCCCeeEEecC
Q psy8771         703 TTPPIPVRTKQ  713 (904)
Q Consensus       703 ~s~~~~~~t~~  713 (904)
                      +|..+.+.|..
T Consensus       225 WS~~~~~~~p~  235 (236)
T 1axi_B          225 FSEVLYVTLPQ  235 (236)
T ss_dssp             CCCCEEECCCC
T ss_pred             CCCCEEEECCC
Confidence            99888887753

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*

Probab=99.50  E-value=4e-13  Score=145.62  Aligned_cols=263  Identities=13%  Similarity=0.211  Sum_probs=153.5

Q ss_pred             CcceeeeccceEEE-----EecCCCCCc---ceeeEeeCCCCCCCCcEEEeccCC---ceEEEEeCCCCC----------
Q psy8771           2 DTRCYVESPEEVFI-----ILCPLPPLI---PGYILVTEPGTAPRDVQVRPLSSS---TMVIQWDEPETP----------   60 (904)
Q Consensus         2 ~~~~~~~~~~~~~~-----~~~~~~p~~---~~~~~~~~p~~~p~~l~~~~~~~~---s~~v~W~~~~~~----------   60 (904)
                      .|+|.+.+......     +....+|..   +....+.  .+....|.|...+..   .+.|.|.+....          
T Consensus        79 ~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~--~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~  156 (388)
T 2v5m_A           79 VYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVI--RGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDG  156 (388)
T ss_dssp             EEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEE--TTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTT
T ss_pred             eEEEEEEccCCeEEecceEEEEccccccccCccceeee--cCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCC
Confidence            48999998765421     111122221   1111111  123444444443332   389999875321          


Q ss_pred             ------CCceeccccccccc-ceEEEEeeeccCCeeee----eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE
Q psy8771          61 ------NGQITHPPTRAARS-HARLAAQSVLRRGRLAH----AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA  129 (904)
Q Consensus        61 ------~g~i~~~~~~~~~~-~~~~~~~~~~~~g~~~~----~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~  129 (904)
                            +|.++.......+. ....|...+...|....    ..+.+..+....+|.+.........+.+|+.++|.|.+
T Consensus       157 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~  236 (388)
T 2v5m_A          157 KYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPA  236 (388)
T ss_dssp             TEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCC
T ss_pred             cEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEEC
Confidence                  23444444445554 55556665544443221    23333332222233332222222678899999999999


Q ss_pred             ccCCCCeEEEeeCCcc-----ccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCC
Q psy8771         130 VGSPMPFVKWRKGQNI-----ELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPV  202 (904)
Q Consensus       130 ~g~p~p~i~W~k~~~~-----~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~  202 (904)
                      .|.|.|.|.|+|++..     .+....++...++.|.|.++  +|+|.|+|.|.|..|..+..+.|.|.....  ..  .
T Consensus       237 ~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~--~~--~  312 (388)
T 2v5m_A          237 QGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLS--AK--I  312 (388)
T ss_dssp             EEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEE--EE--E
T ss_pred             CCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCc--cc--c
Confidence            9999999999997322     12234455566789999999  699999999999999988888888873211  00  1


Q ss_pred             CCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       203 ~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      .|....+.  ....++|.+...+.+..  .+.|...+..     + ......|.|.++...+.+.|+|.|.|..|...
T Consensus       313 ~~~~~~v~--~g~~~~l~C~~~g~p~p--~i~W~~~g~~-----i-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~  380 (388)
T 2v5m_A          313 DPPTQTVD--FGRPAVFTCQYTGNPIK--TVSWMKDGKA-----I-GHSESVLRIESVKKEDKGMYQCFVRNDRESAE  380 (388)
T ss_dssp             ESSEEEEC--TTSCEEEEEEEEEECCC--EEEEEETTEE-----C-SCCSSEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred             CCCcEEec--CCCCEEEEEEeccccCC--eEEEEECCEE-----C-ccCCCEEEEecCChhhCEEEEEEEEcCCCcEE
Confidence            22233332  23456666654322222  3555543211     1 12346899999999999999999999998643

>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4

Probab=99.50  E-value=1.8e-13  Score=118.40  Aligned_cols=97  Identities=19%  Similarity=0.218  Sum_probs=84.5

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+.    ...|.|.++  +|+|.|+|.|
T Consensus         5 ~~pp~i~~~~~~-~~v~~G~~v~l~C~~~g~p~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a   82 (114)
T 2cqv_A            5 SSGPQIIQFPED-QKVRAGESVELFGKVTGTQPITCTWMKF-RKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLV   82 (114)
T ss_dssp             CCCCEESCCCCS-EEEETTCCEEEEEEEESSSSCEEEEEES-SSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEE
T ss_pred             CCCCEEEeCCCC-eEEeCCCeEEEEEEEEcCCCCEEEEEEC-CEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEE
Confidence            468999998888 9999999999999999999999999999 7777766676654    578999999  6999999999


Q ss_pred             EecCcceEEEEEEEEEeecCCCCCCCCCCcce
Q psy8771         176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPLDV  207 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l  207 (904)
                      .|..|.....+.|.|.       ..|.+|...
T Consensus        83 ~N~~g~~~~~~~l~V~-------~~p~~P~~p  107 (114)
T 2cqv_A           83 ENKLGSRQAQVNLTVV-------DKPDPPAGT  107 (114)
T ss_dssp             ECSSCEEECCEEEEEE-------CSCSCCCCC
T ss_pred             EECCCcEEEEEEEEEE-------CCCCCCCCC
Confidence            9999999999999998       666666543

>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*

Probab=99.49  E-value=8.5e-14  Score=116.41  Aligned_cols=87  Identities=18%  Similarity=0.424  Sum_probs=75.5

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC--Cceee----cceEEEEeee--cCCeEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD--DKLPV----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~~----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      .||+|...|.+ +.+.+|+++.|.|.+.|.|.|.|+|+|+ +..+...  .|+.+    +..+|.|.++  +|+|.|+|.
T Consensus         4 ~PP~i~~~p~~-~~v~~G~~~~l~C~~~g~P~p~v~W~k~-g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~   81 (100)
T 3knb_A            4 IPPKIEALPSD-ISIDEGKVLTVACAFTGEPTPEVTWSCG-GRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLS   81 (100)
T ss_dssp             EEEEECCCCSE-EEEETTSEEEEEEEEEEESCCEEEEEET-TEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEE
T ss_pred             CCCEEEeCCCc-EEEeCCCeEEEEEEEEEecCCEEEEEEC-ceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEE
Confidence            57899998888 9999999999999999999999999999 7666543  34443    2357999999  699999999


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.|..|..+..+.|.|+
T Consensus        82 a~N~~G~~~~~~~l~V~   98 (100)
T 3knb_A           82 LGNEFGSDSATVNIHIR   98 (100)
T ss_dssp             EEETTEEEEEEEEEEEE
T ss_pred             EEECCCEEEEEEEEEEE
Confidence            99999999999999987

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.49  E-value=3e-13  Score=114.78  Aligned_cols=100  Identities=23%  Similarity=0.319  Sum_probs=85.4

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      .+|.+|.++++...+.+++.|+|++|.+.++.+.+|.|+|+....    .|........+.+.+.+|.|++.|.|+|+|+
T Consensus         6 ~~P~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~----~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~   81 (106)
T 1x4x_A            6 SGPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEG----SMQICYCGPGLSYEIKGLSPATTYYCRVQAL   81 (106)
T ss_dssp             CSCCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTT----SCCEEEEESCSEEEEESCCSSCEEEEEEEEE
T ss_pred             CCcCCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCC----ceEEEEeCCcceEEEcCCCCCCEEEEEEEEE
Confidence            566889999999999999999999998754589999999987652    2334444667789999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         560 TSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      |..|.|++|..+.+.|....|.+|
T Consensus        82 n~~G~g~~S~~v~~~T~~~~P~~~  105 (106)
T 1x4x_A           82 SVVGAGPFSEVVACVTPPSSGPSS  105 (106)
T ss_dssp             CSSCCCCBCCCEEEECCCCCSCCC
T ss_pred             cCCcCCCCcCCEEEECCCCCcCCC
Confidence            999999999999999988887765

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C

Probab=99.49  E-value=2e-13  Score=114.37  Aligned_cols=98  Identities=19%  Similarity=0.231  Sum_probs=79.0

Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC-CccEEEEec-CcceEEecCCCCCceEEEEE
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD-SEASIVTLK-NQTSFVLDELKKWTEYRIWV  792 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V  792 (904)
                      .|..+|.++.+...+.+++.|+|++|..+..||.+.+|.|.|+..+... .......+. ..+.+.|.+|+|++.|.|+|
T Consensus         3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V   82 (102)
T 3n1f_C            3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKM   82 (102)
T ss_dssp             -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEE
T ss_pred             CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEE
Confidence            5777899999999999999999999965568999999999999876431 122334444 67789999999999999999


Q ss_pred             EEeeCCCCCCCCCcEEeecC
Q psy8771         793 LAGTSIGDGPSSYPITIRTH  812 (904)
Q Consensus       793 ~a~~~~g~g~~s~~~~~~t~  812 (904)
                      +|+|..|.|++|.++.++|.
T Consensus        83 ~A~n~~G~G~~S~~~~~~T~  102 (102)
T 3n1f_C           83 QCFNEGGESEFSNVMICETK  102 (102)
T ss_dssp             EEEETTEECCCCCCEEEECC
T ss_pred             EEECCCcCCCCCCCEEeecC
Confidence            99999999999999999883

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.48  E-value=2.2e-13  Score=119.62  Aligned_cols=116  Identities=25%  Similarity=0.500  Sum_probs=95.2

Q ss_pred             CCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEE
Q psy8771         468 TTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTT  542 (904)
Q Consensus       468 ~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~  542 (904)
                      +|....++|....|+.+|.++++...+.+++.|+|++|..  .+|.+.+|.|+|+..+......|....   ..+.+.+.
T Consensus         2 sS~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
T 1va9_A            2 SSGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYT   81 (122)
T ss_dssp             CCCCCSSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEE
T ss_pred             CCCCEEEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEE
Confidence            3556777888888877899999999999999999999876  578999999999987644332332222   23458899


Q ss_pred             EcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       543 ~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      |.+|.|++.|.|+|+|+|..|.|++|..+.++|....|.+|
T Consensus        82 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~p  122 (122)
T 1va9_A           82 LDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPSSG  122 (122)
T ss_dssp             EESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSCCCCC
T ss_pred             eCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCCCCCC
Confidence            99999999999999999999999999999999988887654

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A

Probab=99.47  E-value=6.8e-13  Score=128.21  Aligned_cols=170  Identities=21%  Similarity=0.276  Sum_probs=115.9

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceee---cc--eEEEEeee--cCCeEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV---GR--NVLTLDRV--TESENYTC  173 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~---~~--~~l~i~~l--~d~g~Y~c  173 (904)
                      ..||.|...|.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+.. ..++.+   .+  ..|.|.++  +|+|.|+|
T Consensus         2 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C   79 (197)
T 2j8h_A            2 AMAPHFKEELRN-LNVRYQSNATLVCKVTGHPKPIVKWYRQ-GKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV   79 (197)
T ss_dssp             -CCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEET-TEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEE
T ss_pred             CCCCEEEEcCCc-cEEcCCCEEEEEEEEeecCCCEEEEEEC-CEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEE
Confidence            358999999988 9999999999999999999999999999 555543 345443   22  38999999  69999999


Q ss_pred             EEEecCcceEEEEEEEEEeecCCCCCCCCC---CcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEE
Q psy8771         174 IAASVLGVIETSTIVKVQCKYAPLLTLPVA---PLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSE  246 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~---p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~  246 (904)
                      .|.|..|..+..+.|.|....  ....|..   +..+.+.  ....+.|.+...+.+..  .+.|...+.    ...+..
T Consensus        80 ~~~n~~g~~~~~~~l~V~~~p--~~~~~~~~~~~~~~~~~--~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~  153 (197)
T 2j8h_A           80 RATNQGGSVSGTASLEVEVPA--KIHLPKTLEGMGAVHAL--RGEVVSIKIPFSGKPDP--VITWQKGQDLIDNNGHYQV  153 (197)
T ss_dssp             EEEETTEEEEEEEEEEEEEEE--EECCSSCBTTBEEEEEE--TTCCCEEEEEEEEESCC--EEEEEESSCEECSSSSCEE
T ss_pred             EEEECCCceeEEEEEEEcCCC--cCCCCccccccCeEEEe--CCCEEEEEEEEEecCCC--cEEEEECCEEeecCCCEEE
Confidence            999999998888888887322  1222211   2223232  23344444443322222  344443321    122333


Q ss_pred             eecceeceEEEcC-CCCCCeEEEEEEEEcCCCCC
Q psy8771         247 ISGIITTYYTVRN-LSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       247 ~~~~~~~~~~i~~-L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ........+.|.+ +...+.+.|+|.|.|..|..
T Consensus       154 ~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~  187 (197)
T 2j8h_A          154 IVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGID  187 (197)
T ss_dssp             EECSSEEEEECTTCCCGGGCEEEEEEEEETTEEE
T ss_pred             EEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcE
Confidence            3333457899999 99999999999999998864

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A

Probab=99.47  E-value=1.2e-12  Score=127.96  Aligned_cols=173  Identities=16%  Similarity=0.225  Sum_probs=117.6

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----cceEEEEeee---cCCeEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----GRNVLTLDRV---TESENYTC  173 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----~~~~l~i~~l---~d~g~Y~c  173 (904)
                      ..||.|...|.+ +.+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+........     ....|.|.++   +|+|.|+|
T Consensus         4 ~~~P~~~~~p~~-~~v~~G~~v~L~C~~~g~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C   81 (212)
T 2yd6_A            4 ETPPRFTRTPVD-QTGVSGGVASFICQATGDPRPKIVWNKK-GKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC   81 (212)
T ss_dssp             CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEE
T ss_pred             CCCCeEEeCcce-eEEecCCeEEEEEEEeeCCCCEEEEEEC-CcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEE
Confidence            568999999998 9999999999999999999999999999 666654432221     3457999987   59999999


Q ss_pred             EEEecCcceEEEEEEEEEeecCCCCCCC---CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC-------CC
Q psy8771         174 IAASVLGVIETSTIVKVQCKYAPLLTLP---VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN-------TP  243 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~-------~~  243 (904)
                      .|.|..|.....+.|.|..........|   ..|....+  .....+.|.+...+.+...  +.|...+..       ..
T Consensus        82 ~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~--~~g~~v~l~C~~~g~p~p~--v~W~~~g~~l~~~~~~~~  157 (212)
T 2yd6_A           82 VASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVV--ERTRTATMLCAASGNPDPE--ITWFKDFLPVDTSNNNGR  157 (212)
T ss_dssp             EEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEE--ETTSCEEEEEEEECSSCCE--EEEEETTEEC------CC
T ss_pred             EEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeE--ecCCCEEEEEEecCCCCCe--EEEEECCccccCcCCCce
Confidence            9999999988888888873211000001   01222222  2234555555544322222  444443211       12


Q ss_pred             eEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         244 YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       244 ~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      +..........+.|.++...+.+.|+|.|.|..|...
T Consensus       158 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~  194 (212)
T 2yd6_A          158 IKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRY  194 (212)
T ss_dssp             EEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             EEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccc
Confidence            2222223357899999999999999999999999754

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.47  E-value=1.1e-13  Score=119.95  Aligned_cols=112  Identities=32%  Similarity=0.489  Sum_probs=95.7

Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEE
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV  778 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~  778 (904)
                      |.|..|..+.++|.+.+|. +|.++++...+.+++.|+|+++.    ++.+.+|.|+|+..+...+  ........+.++
T Consensus         1 G~g~~S~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~----~~~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~   73 (115)
T 1x5z_A            1 GSSGSSGDIQVITQTGVPG-QPLNFKAEPESETSILLSWTPPR----SDTIANYELVYKDGEHGEE--QRITIEPGTSYR   73 (115)
T ss_dssp             CCCCCCCCCCCCCCSCCCC-CCEEEEEECSSSSEEEEEEECCS----CCCCCEEEECBEESSSCCC--BCCEECSSSEEE
T ss_pred             CCCCCCCCEEEECCCCCCC-CCccCEeeeCCCCEEEEEEcCCC----CCCccEEEEEEEeCCCCCc--eEEecCCCcEEE
Confidence            6788888999999998887 78999999999999999999984    2478999999998765433  222223679999


Q ss_pred             ecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771         779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       779 i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~  817 (904)
                      |.+|++++.|.|+|+|.|..|.|.+|..+.++|...+|+
T Consensus        74 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~  112 (115)
T 1x5z_A           74 LQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSSGP  112 (115)
T ss_dssp             EECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCCCC
T ss_pred             ECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCCCC
Confidence            999999999999999999999999999999999988775

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.47  E-value=4e-13  Score=117.33  Aligned_cols=116  Identities=22%  Similarity=0.384  Sum_probs=95.4

Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCeEEE-ecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEeecCceEE
Q psy8771         464 GEGATTPPIPVRTKQYEPGTAPRDVQVR-PLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLT  541 (904)
Q Consensus       464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~-~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~  541 (904)
                      |.|.+|..+.+.|....| .+|.++.+. ..+.+++.|+|++|.+.++ .+.+|.|+++.....  ..|........+.+
T Consensus         1 G~s~~S~~~~~~t~~~~P-~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~   77 (120)
T 2crm_A            1 GSSGSSGVVEFTTCPDKP-GIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG--NKWEMIYSGATREH   77 (120)
T ss_dssp             CCCTTCSCCSCCSCCCCC-CCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSS--CCCEEEECSSCSEE
T ss_pred             CCCCCcCCEEEEeCCCCC-CCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCC--cCCEEEEeccccEE
Confidence            567788888888776655 678888777 7788999999999887644 799999999987532  46777666678889


Q ss_pred             EEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCC
Q psy8771         542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ  582 (904)
Q Consensus       542 ~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~  582 (904)
                      .+.+|.+++.|.|+|+|+|..|.|.+|..+.+.|....|.+
T Consensus        78 ~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~p~p  118 (120)
T 2crm_A           78 LCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVSGPS  118 (120)
T ss_dssp             EECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCSCCS
T ss_pred             EECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCCCCC
Confidence            99999999999999999999999999998888887655543

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}

Probab=99.47  E-value=5.6e-13  Score=145.35  Aligned_cols=233  Identities=15%  Similarity=0.217  Sum_probs=145.7

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC--------------CCceecccccccccceEEEEeeeccCCee-eeeeeeccC-C
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP--------------NGQITHPPTRAARSHARLAAQSVLRRGRL-AHAVRQVAD-P   99 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~--------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~v~~-~   99 (904)
                      ....|.|...+.+...|.|.+....              ++.+....+...+.....|...+...... ....+.+.. +
T Consensus       137 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p  216 (403)
T 3laf_A          137 DTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDP  216 (403)
T ss_dssp             SCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCC
T ss_pred             CeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCC
Confidence            5566667666778889999875321              23344444444454445555444332222 233344332 1


Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCcee-ecceEEEEeee--cCCeEEEEEE
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLP-VGRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~-~~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ....++.+...+.. ..+.+|+.++|.|.+.|.|.+.+.|+|+ +..+.. ..++. ..++.|.|.++  +|+|.|+|.|
T Consensus       217 ~~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~~~W~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a  294 (403)
T 3laf_A          217 GLHRQLYFLQRPSN-VIAIEGKDAVLECCVSGYPPPSFTWLRG-EEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVV  294 (403)
T ss_dssp             CCCEEEEEEECCCC-EEEETTSCEEECCEEEEESCCEEEEEET-TEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEE
T ss_pred             CcccCceEecCCCc-eEecCCCcEEEEEEcCCCCCCeEEEEEC-CeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEE
Confidence            12223456667777 8899999999999999999999999999 555543 33333 35678999999  6999999999


Q ss_pred             EecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC---CCeEEeeccee
Q psy8771         176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN---TPYSEISGIIT  252 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~---~~~~~~~~~~~  252 (904)
                      .|..|..+..+.|.|....  ..  ...|.++.+.  ....++|.+...+.+..  .+.|...+..   .......  ..
T Consensus       295 ~n~~g~~~~~~~l~V~~~p--~~--~~~~~~~~~~--~g~~v~l~C~~~g~p~p--~v~W~~~g~~~~~~~~~~~~--~~  364 (403)
T 3laf_A          295 TYKNENISASAELTVLVPP--WF--LNHPSNLYAY--ESMDIEFECAVSGKPVP--TVNWMKNGDVVIPSDYFQIV--GG  364 (403)
T ss_dssp             EETTEEEEEEEEEEEEEEE--EE--EECCCCEECC--TTCCEEECCEEEEESCC--EEEEEETTEECCCSSSEEEE--TT
T ss_pred             EcCCCceEEEEEEEEECCC--cE--eecCcceEEe--cCCeEEEEEEEeeccCC--EEEEEECCEECCCCCcEEEe--cC
Confidence            9999999999999887321  11  1233343332  23345555543322222  2444433211   1111111  23


Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++...+.+.|+|.|.|..|...
T Consensus       365 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~  392 (403)
T 3laf_A          365 SNLRILGVVKSDEGFYQCVAENEAGNAQ  392 (403)
T ss_dssp             TEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred             ccEEEeccccccCEEEEEEEEcCCceEE
Confidence            5699999999999999999999998754

>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*

Probab=99.47  E-value=4.2e-13  Score=144.86  Aligned_cols=150  Identities=19%  Similarity=0.333  Sum_probs=117.8

Q ss_pred             CCCCCcEEEeccCCceEEEEeCCCC-----------CCCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCC
Q psy8771          35 TAPRDVQVRPLSSSTMVIQWDEPET-----------PNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRV  103 (904)
Q Consensus        35 ~~p~~l~~~~~~~~s~~v~W~~~~~-----------~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~  103 (904)
                      +....|.|...+.+.+.+.|.+...           .+|.+....+...|...+.|...+..+.......+.+     ..
T Consensus       220 G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v-----~~  294 (384)
T 3kld_A          220 GTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTF-----YA  294 (384)
T ss_dssp             TSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE-----EE
T ss_pred             CCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEE-----ec
Confidence            3567788888889999999986421           1334444445555555555655554444444445554     45


Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      +|.|...+.+ ..+..|+.+.|.|.+.|.|.|.|+|+|+ +..+....++.+.++.|.|.++  +|+|.|+|.|.|..|.
T Consensus       295 ~P~~~~~~~~-~~v~~g~~v~l~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~  372 (384)
T 3kld_A          295 QPNWVQIIND-IHVAMEESVFWECKANGRPKPTYRWLKN-GDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGV  372 (384)
T ss_dssp             EEEEEECCCC-EEECTTCCEEEECEEEEESCCEEEEEET-TEECCCBTTEEEETTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred             CCccccCCCc-eEecCCCCEEEEeECCccCCCeEEEEEC-CEECCCCccEEEeCCEEEEeecChhhCEEEEEEEEeCCce
Confidence            7888888888 9999999999999999999999999999 7778777888888889999998  7999999999999999


Q ss_pred             eEEEEEEEEE
Q psy8771         182 IETSTIVKVQ  191 (904)
Q Consensus       182 ~~~~~~l~v~  191 (904)
                      ..+++.|.|.
T Consensus       373 ~~~~a~L~V~  382 (384)
T 3kld_A          373 IFSSAELSVI  382 (384)
T ss_dssp             EEEEEEEEEC
T ss_pred             EEeceEEEEe
Confidence            9999999886

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.47  E-value=7.4e-13  Score=114.54  Aligned_cols=105  Identities=32%  Similarity=0.620  Sum_probs=88.7

Q ss_pred             ecCCCCCCCCCCeEEEec--CCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeE
Q psy8771         476 TKQYEPGTAPRDVQVRPL--SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIY  552 (904)
Q Consensus       476 t~~~~p~~~p~~l~v~~~--~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y  552 (904)
                      |.+..|+.+|.++.+...  +.+++.|+|++|...+|.+.+|.|+|+.........|.... ....+.+.|.+|.|++.|
T Consensus         3 T~~~~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y   82 (114)
T 2ede_A            3 SGSSGPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMY   82 (114)
T ss_dssp             CCCCCCCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSCEE
T ss_pred             CCCCCCCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCCEE
Confidence            445678899999999888  77999999999988888999999999986654445565444 367788999999999999


Q ss_pred             EEEEEEEeCCCCCCCCCcEEEecCCCCC
Q psy8771         553 TIRVQAFTSVGPGPLSAPVLVKTQQGVP  580 (904)
Q Consensus       553 ~~~V~a~~~~g~~~~S~~~~~~t~~~~p  580 (904)
                      .|+|+|+|..|.|++|..+.++|....|
T Consensus        83 ~~~V~A~n~~G~g~~S~~~~~~T~~~~p  110 (114)
T 2ede_A           83 YFRIQARNSKGVGPLSDPILFRTLKVSG  110 (114)
T ss_dssp             EEEEEEECSSCBCCCCCCEEEECCCSSC
T ss_pred             EEEEEEEeCCcCcCCcccEEEEecCCCC
Confidence            9999999999999999999999866543

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.47  E-value=7e-13  Score=114.34  Aligned_cols=112  Identities=21%  Similarity=0.379  Sum_probs=92.9

Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEE
Q psy8771         464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT  541 (904)
Q Consensus       464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~  541 (904)
                      |.++.|..+.+.|.+++|..+|.++++.. +.++|.|+|++|  ...+|.+.+|+|+|+......   + .......+.+
T Consensus         1 G~G~~S~~v~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~---~-~~~~~~~~~~   75 (117)
T 1wj3_A            1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNN---V-QVLNTNKTSA   75 (117)
T ss_dssp             CCCCCCCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSS---C-EEEEESSSEE
T ss_pred             CcCCCCCCEEEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCC---C-eEEeCCCcEE
Confidence            56778888999999989988999998877 778999999998  568899999999999876432   2 2233445667


Q ss_pred             EEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCC
Q psy8771         542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS  581 (904)
Q Consensus       542 ~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~  581 (904)
                      .+. |.+++.|.|+|+|+|..|.|++|..+.+.|..+.|+
T Consensus        76 ~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v~p  114 (117)
T 1wj3_A           76 ELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGP  114 (117)
T ss_dssp             EEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCCCS
T ss_pred             EEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCCC
Confidence            777 999999999999999999999999999999776543

>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}

Probab=99.47  E-value=9.6e-13  Score=143.51  Aligned_cols=305  Identities=14%  Similarity=0.170  Sum_probs=175.7

Q ss_pred             CCCCCcEEEecc-CCceEEEEeCCCC-------------CCCceecccc-----cccccceEEEEeeeccCCeee--eee
Q psy8771          35 TAPRDVQVRPLS-SSTMVIQWDEPET-------------PNGQITHPPT-----RAARSHARLAAQSVLRRGRLA--HAV   93 (904)
Q Consensus        35 ~~p~~l~~~~~~-~~s~~v~W~~~~~-------------~~g~i~~~~~-----~~~~~~~~~~~~~~~~~g~~~--~~~   93 (904)
                      +.+..|.|...+ .+...+.|.+...             .+|.+....+     ...|.....|...+...|...  ...
T Consensus        36 G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~  115 (403)
T 3laf_A           36 GGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAK  115 (403)
T ss_dssp             TCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCEE
T ss_pred             CCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEEE
Confidence            355566666554 4677899986521             1343322222     222444444555544444432  223


Q ss_pred             eeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC---CCCcee-ecceEEEEeee--cC
Q psy8771          94 RQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT---PDDKLP-VGRNVLTLDRV--TE  167 (904)
Q Consensus        94 ~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~---~~~~~~-~~~~~l~i~~l--~d  167 (904)
                      +.     +..||.+...+.. +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+.   ...+.. ..++.|.|.++  +|
T Consensus       116 l~-----v~~p~~~~~~~~~-~~~~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d  188 (403)
T 3laf_A          116 VM-----VAGPLRFLSQTES-ITAFMGDTVLLKCEVIGDPMPTIHWQKN-QQDLNPIPGDSRVVVLPSGALQISRLQPGD  188 (403)
T ss_dssp             EE-----ECCCCEECSCCCC-EEEETTSCEEECCCEECSSCCEEEEEES-SSBCCCCTTCCSEEECTTSCEEECSCCGGG
T ss_pred             EE-----ecCCCccccCCCc-EEEEcCCeEEEEEEEcccCCCeEEEEEC-CEeccccCCceEEEEcCCceEEEccccccc
Confidence            33     2457888888887 9999999999999999999999999999 55552   233333 35778999999  69


Q ss_pred             CeEEEEEEEecCcce-EEEEEEEEEeecCCCCCCCCC---------CcceEEEeecCCeEEEEEeCCCccceEEEEEEEe
Q psy8771         168 SENYTCIAASVLGVI-ETSTIVKVQCKYAPLLTLPVA---------PLDVKISEVTATSVRLDWTYPSETLLYYVIQYKP  237 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~~-~~~~~l~v~~~~~~~~~~P~~---------p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~  237 (904)
                      +|.|+|.|.|..|.. .....|.|.       ..|..         |.++.+.  ....++|.+...+.+..  .+.|..
T Consensus       189 ~G~Y~C~~~n~~~~~~~~~~~l~v~-------~~p~~~~~~~~~~~~~~~~~~--~g~~~~l~C~~~~~p~~--~~~W~~  257 (403)
T 3laf_A          189 SGVYRCSARNPASTRTGNEAEVRIL-------SDPGLHRQLYFLQRPSNVIAI--EGKDAVLECCVSGYPPP--SFTWLR  257 (403)
T ss_dssp             CEEEEEEEECSSCCCBCCCEEEEEE-------CCCCCCEEEEEEECCCCEEEE--TTSCEEECCEEEEESCC--EEEEEE
T ss_pred             CEEEEEEEEcCCCceeccceeEEEe-------cCCCcccCceEecCCCceEec--CCCcEEEEEEcCCCCCC--eEEEEE
Confidence            999999999988763 355677776       33322         2222222  23455555554322222  244443


Q ss_pred             CCCC----CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEE
Q psy8771         238 KAAN----TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVI  313 (904)
Q Consensus       238 ~~~~----~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l  313 (904)
                      .+..    .......  ....+.|.++...+.+.|+|.|.|..|....+..+.+...+. ....|.++.+..  ...+.|
T Consensus       258 ~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~-~~~~~~~~~~~~--g~~v~l  332 (403)
T 3laf_A          258 GEEVIQLRSKKYSLL--GGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPW-FLNHPSNLYAYE--SMDIEF  332 (403)
T ss_dssp             TTEECCCSSSSEEEE--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEE-EEECCCCEECCT--TCCEEE
T ss_pred             CCeeccCCCceEEEC--CccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCc-EeecCcceEEec--CCeEEE
Confidence            3211    1111111  125799999999999999999999987643333333322111 011223333222  233444


Q ss_pred             EecCCCCCCceeeEEEEEe---------eceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         314 QWDEPETPNGQITAKHHRR---------IGLVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       314 ~W~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                      .+.....+...+.++....         ......+.|..+.....-.+++.|.|..|.
T Consensus       333 ~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~  390 (403)
T 3laf_A          333 ECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGN  390 (403)
T ss_dssp             CCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred             EEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCce
Confidence            4433222222333322110         111235788888888888888999988774

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*

Probab=99.46  E-value=7.8e-13  Score=144.28  Aligned_cols=236  Identities=19%  Similarity=0.223  Sum_probs=142.9

Q ss_pred             CCCCcEEEe-ccCCceEEEEeCCCC------------CCCceeccccccccc-ceEEEEeeeccCCe-ee--eeeeec--
Q psy8771          36 APRDVQVRP-LSSSTMVIQWDEPET------------PNGQITHPPTRAARS-HARLAAQSVLRRGR-LA--HAVRQV--   96 (904)
Q Consensus        36 ~p~~l~~~~-~~~~s~~v~W~~~~~------------~~g~i~~~~~~~~~~-~~~~~~~~~~~~g~-~~--~~~~~v--   96 (904)
                      ....|.|.. .+.+...+.|.+...            .+|.+........+. ....|...+..... ..  ...+.+  
T Consensus       132 ~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~  211 (404)
T 3p3y_A          132 APLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT  211 (404)
T ss_dssp             SCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEEC
T ss_pred             CcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEec
Confidence            455555554 566788999987631            134444333444442 34445444333321 11  122222  


Q ss_pred             cCCCCCCCCeEEcCCC--CceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC-ceeecceEEEEeee--cCCeEE
Q psy8771          97 ADPVRRVPPQFSIPPP--ALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD-KLPVGRNVLTLDRV--TESENY  171 (904)
Q Consensus        97 ~~~~~~~~P~~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~-~~~~~~~~l~i~~l--~d~g~Y  171 (904)
                      .......+|.+..++.  ....+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+.... ++...++.|.|.++  +|+|.|
T Consensus       212 ~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y  290 (404)
T 3p3y_A          212 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKK-GGDLPSDKAKFENFNKALRITNVSEEDSGEY  290 (404)
T ss_dssp             CSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEET-TBCCCTTTEEEEGGGTEEEESSCCGGGCEEE
T ss_pred             cCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEEC-CEECCCCcccccccCceEEEccCCHhHCEEE
Confidence            1222345666655442  126789999999999999999999999999 66665443 34446789999999  699999


Q ss_pred             EEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe---EEee
Q psy8771         172 TCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY---SEIS  248 (904)
Q Consensus       172 ~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~---~~~~  248 (904)
                      +|.|.|..|..+..+.|.|....  .+  ...|.+..+..  ...++|.+...+.+..  .+.|...+.....   ....
T Consensus       291 ~C~a~n~~g~~~~~~~l~V~~~p--~~--~~~~~~~~v~~--g~~~~l~C~~~g~p~p--~v~W~~~g~~~~~~~~~~~~  362 (404)
T 3p3y_A          291 FCLASNKMGSIRHTISVRVKAAP--YW--LDEPKNLILAP--GEDGRLVCRANGNPKP--TVQWMVNGEPLQSAPPNPNR  362 (404)
T ss_dssp             EEEEECSSCEEEEEEEEEEEEEE--EE--EECCCCEEECT--TCCEEEECEEEEESCC--EEEEEETTEEGGGSCCCTTE
T ss_pred             EEEEEeCCCcEEEEEEEEEeCCC--ee--eccCCcceeec--CCcEEEEEEccccCCC--ceEEEECCEecCCCCCCceE
Confidence            99999999998888888887321  11  12334444332  3345555544322222  2444433211000   0000


Q ss_pred             cceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         249 GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ......+.|.++...+.+.|+|.|.|..|...
T Consensus       363 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~  394 (404)
T 3p3y_A          363 EVAGDTIIFRDTQISSRAVYQCNTSNEHGYLL  394 (404)
T ss_dssp             EEETTEEEESSCCSSCCCEEEEEEEETTEEEE
T ss_pred             EecCCEEEEeecCHHHCEEEEEEEEeCCCcEE
Confidence            11235799999999999999999999998653

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.46  E-value=2e-13  Score=119.43  Aligned_cols=114  Identities=20%  Similarity=0.362  Sum_probs=92.5

Q ss_pred             CCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEE
Q psy8771         700 EGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFV  778 (904)
Q Consensus       700 ~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~  778 (904)
                      .+..+..+.+.|...+|. +|.++++...+.+++.|+|++|. +..+|.+.+|.|+|+..+...+ ....... ..+.++
T Consensus         2 ~sgss~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~-~~~~g~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~   78 (120)
T 1x5f_A            2 SSGSSGEHAPATTGPLPS-APRDVVASLVSTRFIKLTWRTPA-SDPHGDNLTYSVFYTKEGIARE-RVENTSHPGEMQVT   78 (120)
T ss_dssp             CCCCCSSCCCCCCCCCCC-CCEEEEEEEECSSCEEEEEECCS-SCSSCCSSEEEEEEEETTCCCC-EEEECSSTTCSEEE
T ss_pred             CCCCCCCEEecCCCCCCC-CCCCcEEEecCCCEEEEEECCCC-CCCCCcEEEEEEEEEECCCCCc-eEEEeccCCccEEE
Confidence            344455677788888776 78999999999999999999985 3678899999999998764433 1222233 789999


Q ss_pred             ecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771         779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       779 i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P  816 (904)
                      |.+|+|++.|.|+|+|.|..|.|.+|..+.++|.+..|
T Consensus        79 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p  116 (120)
T 1x5f_A           79 IQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG  116 (120)
T ss_dssp             ECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred             eCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCC
Confidence            99999999999999999999999999999999975433

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.46  E-value=4.3e-13  Score=115.74  Aligned_cols=104  Identities=17%  Similarity=0.176  Sum_probs=85.5

Q ss_pred             CCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC-CccEEEEec-CcceEEecCCCCCceEEE
Q psy8771         713 QYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD-SEASIVTLK-NQTSFVLDELKKWTEYRI  790 (904)
Q Consensus       713 ~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-~~~~~~~~~-~~~~~~i~~L~p~t~Y~~  790 (904)
                      +..|..+|.++.+...+.++|.|+|++|..+..+|.+.+|.|+|+..+... .......+. ..+.++|.+|+|++.|.|
T Consensus         5 ~~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~   84 (114)
T 1x4y_A            5 SSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDI   84 (114)
T ss_dssp             CCSCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEE
T ss_pred             ccCCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEE
Confidence            446777899999999999999999999965568899999999998765431 111112333 668899999999999999


Q ss_pred             EEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771         791 WVLAGTSIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       791 ~V~a~~~~g~g~~s~~~~~~t~~~~P  816 (904)
                      +|+|+|..|.|++|..+.++|.+.++
T Consensus        85 ~V~A~n~~G~g~~S~~v~~~T~~~~~  110 (114)
T 1x4y_A           85 KMQCFNEGGESEFSNVMICETKARSG  110 (114)
T ss_dssp             EEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred             EEEEEcCCccCCCcCCEEEEeCCCCC
Confidence            99999999999999999999987654

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=3.6e-13  Score=117.29  Aligned_cols=113  Identities=18%  Similarity=0.223  Sum_probs=90.0

Q ss_pred             CCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccE----EEEEEEEEEccCCCCccEEEEec-Ccc
Q psy8771         701 GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHI----VYYKLQFVETGRSDSEASIVTLK-NQT  775 (904)
Q Consensus       701 ~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~----~~Y~v~~~~~~~~~~~~~~~~~~-~~~  775 (904)
                      +..|....+.+....|..+|.+|++...+.++|.|+|+++.  ..++.+    .+|+|+|+..+......  ..+. ..+
T Consensus         3 ~~~s~~~~~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~--~~~~~i~~~~~~Y~v~y~~~~~~~~~~--~~~~~~~~   78 (123)
T 2edd_A            3 SGSSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNS--VPKNQKTSEVRLYTVRWRTSFSASAKY--KSEDTTSL   78 (123)
T ss_dssp             SCCSCCCCSCSSCCCSSCCCEEEEEEEEETTEEEEEEECSS--SCSSCCCSCCCCEEEEEEETTCTTCCC--CCEEESSS
T ss_pred             CccCCCCcCCCccCCCCCCCcceEEEEcCCCeEEEEecCCC--CCcccccCcCceEEEEEEECCCCCccE--EEEeCCce
Confidence            34455666667766777789999999999999999999874  344444    49999999874322211  2233 688


Q ss_pred             eEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC-CCC
Q psy8771         776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED-DPS  817 (904)
Q Consensus       776 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~-~P~  817 (904)
                      .++|.||+|++.|.|+|+|.|..|.|++|..+.++|.++ +|+
T Consensus        79 ~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~~~Ps  121 (123)
T 2edd_A           79 SYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASGPS  121 (123)
T ss_dssp             EEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCSSSCC
T ss_pred             EEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCCCCCC
Confidence            999999999999999999999999999999999999999 885

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A

Probab=99.46  E-value=7.9e-13  Score=142.93  Aligned_cols=232  Identities=15%  Similarity=0.163  Sum_probs=138.7

Q ss_pred             CCCcEEEe-ccCCceEEEEeCCCCC--------------CCceecccccccccceEEEEeeeccCCeee-----eeeeec
Q psy8771          37 PRDVQVRP-LSSSTMVIQWDEPETP--------------NGQITHPPTRAARSHARLAAQSVLRRGRLA-----HAVRQV   96 (904)
Q Consensus        37 p~~l~~~~-~~~~s~~v~W~~~~~~--------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~v   96 (904)
                      ...|.|.. .+.+.+.+.|.+....              +|.+........+.....|...+.......     ...+.+
T Consensus       118 ~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v  197 (382)
T 1cs6_A          118 GVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSL  197 (382)
T ss_dssp             CEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEE
T ss_pred             cEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeecc
Confidence            33444432 2346789999765322              233444444444544445554443321111     122222


Q ss_pred             cC-CCCCCCCeEEcC-CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEE
Q psy8771          97 AD-PVRRVPPQFSIP-PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYT  172 (904)
Q Consensus        97 ~~-~~~~~~P~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~  172 (904)
                      .. .....+|.+... +.. ..+.+|+.++|.|.+.|.|.|.|.|+|+ +..+..  ++......|.|.++  +|+|.|+
T Consensus       198 ~~~~~~~~~P~~~~~~~~~-~~~~~G~~v~l~C~~~g~p~~~i~W~~~-~~~~~~--~~~~~~~~L~i~~~~~~d~G~Y~  273 (382)
T 1cs6_A          198 AAEDARQYAPSIKAKFPAD-TYALTGQMVTLECFAFGNPVPQIKWRKL-DGSQTS--KWLSSEPLLHIQNVDFEDEGTYE  273 (382)
T ss_dssp             ESCCCCCEEEEEEECCCSE-EEEETTCCEEEECEEEEESCCEEEEEEC-CSCCSC--CCSBSSSEEEECSCCGGGCEEEE
T ss_pred             chhhcccCCCceeccCCCc-eEEeCCCeEEEEEEEccCCCCEEEEEEC-Cccccc--EEecCCcEEEEccCChhhCEEEE
Confidence            11 122346766654 445 8999999999999999999999999998 444433  33446778999999  6999999


Q ss_pred             EEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeeccee
Q psy8771         173 CIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT  252 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~  252 (904)
                      |.|.|..|.....+.|.|....  ...  ..+....+.  ....++|.+...+.+...  +.|...+.............
T Consensus       274 C~a~n~~g~~~~~~~l~V~~~p--~~~--~~~~~~~~~--~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~~~~~~~~~  345 (382)
T 1cs6_A          274 CEAENIKGRDTYQGRIIIHAQP--DWL--DVITDTEAD--IGSDLRWSCVASGKPRPA--VRWLRDGQPLASQNRIEVSG  345 (382)
T ss_dssp             EEEEETTEEEEEEEEEEEEEEE--EEE--ECCCCEEEE--TTCCEEEECEEEEESCCE--EEEEETTEECCCCSSEEEET
T ss_pred             EEEEcCCCeEEEEEEEEEecCC--Ccc--cCCCccEEc--CCCeEEEEEEeeeecCCE--EEEEECCEECCCCceEEEEC
Confidence            9999999998888888887321  111  123333332  234555555543222222  44443321100000000123


Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++...+.+.|+|.|.|..|...
T Consensus       346 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~  373 (382)
T 1cs6_A          346 GELRFSKLVLEDSGMYQCVAENKHGTVY  373 (382)
T ss_dssp             TEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred             CEEEECcCCcccCEEEEEEEEeCCCeEE
Confidence            5799999999999999999999998653

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C

Probab=99.46  E-value=3.5e-11  Score=123.19  Aligned_cols=271  Identities=15%  Similarity=0.176  Sum_probs=168.8

Q ss_pred             CCCCCCeEEEecCCceEEEEecCC-CCCC-CceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEP-ETPN-GQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p-~~~~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      ..+|.||.+...+...+.|+|++| .... ..-..|.|.++..+.   ..|....   ........|..+  |.++|++.
T Consensus        12 ~~pP~nl~i~~~~~~~~~l~W~~~p~~~~~~~~l~Y~v~~~~~~~---~~w~~~~---t~~~~~~~L~~~--~~~rVrt~   83 (317)
T 3qt2_A           12 LLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKE---DDYETRI---TESKAVTILHMG--FSASVRTI   83 (317)
T ss_dssp             CCCCEEEEEEEEETTEEEEEEECCTTSSCSSSCCEEEEEEEESSC---EEEEESS---SEEEEECCCTTC--EEEEEEEE
T ss_pred             cCCCcceEEEECCCceEEEEECCCCccccCcCcEEEEEEECCCCC---cccEeec---cccccccccCCC--eEEEEEEE
Confidence            468999999988889999999994 3322 234789999988752   4455332   344456677765  88899887


Q ss_pred             eCCCCC-CCCCcEEEec--CCCC-CCCCCCceEEecC-----------CCeEEEEEeCCCCCCCCceEEEEEeccCCCCC
Q psy8771         560 TSVGPG-PLSAPVLVKT--QQGV-PSQPRDLRAVDIQ-----------ETAVTLAWSKPTHSGENIISYELYWNDTYAKP  624 (904)
Q Consensus       560 ~~~g~~-~~S~~~~~~t--~~~~-p~~p~~~~~~~~~-----------~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p  624 (904)
                      ...|.+ .+|..+....  ..+. |..|.+|.+...+           ...+..+|.+...                   
T Consensus        84 ~~~~~s~~~S~w~~~~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~~-------------------  144 (317)
T 3qt2_A           84 LQNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGTD-------------------  144 (317)
T ss_dssp             EECSSCEEECCCEEEEECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCTT-------------------
T ss_pred             ECCCCCccccccccccccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeCCCC-------------------
Confidence            775532 3455554333  2233 3478888877655           4678889987542                   


Q ss_pred             cceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc--eEEec--ccceEEEeCCC----CCcEEEEEEEEEc
Q psy8771         625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH--HRRIG--LVETYSLTGLY----PNTLYYIWLAAQS  696 (904)
Q Consensus       625 ~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~--~~~~~~l~~L~----p~t~Y~v~V~a~~  696 (904)
                                             ......|.+.|+..+.....  .....  ....+.+....    ....|.|.|.+.+
T Consensus       145 -----------------------~~~~t~Y~L~y~~~~~~~eC~~y~~~~~~~~~~C~f~~~~~~~~~~~~~~i~V~gss  201 (317)
T 3qt2_A          145 -----------------------APEDTQYFLYYRYGSWTEECQEYSMDTLGRNIACWFPRTFILSKGRDWLAVLVNGSS  201 (317)
T ss_dssp             -----------------------CCTTCEEEEEEEETTEEEECCCEEECTTSCEEEEEESSCSCCTTCCSEEEEEEEEEC
T ss_pred             -----------------------CCCCeeEEEEEEeCCCCeeCCccccCCCcceeEEEeCCccccccCcEEEEEEEEcCC
Confidence                                   12235677777765421111  11111  12466676543    3468899998766


Q ss_pred             CCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcce
Q psy8771         697 PRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTS  776 (904)
Q Consensus       697 ~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~  776 (904)
                      ..+.-. +....+.....+.+.||.+|.+... .+.+.|+|..|... .......|+|+|+......+  ....+ ..+.
T Consensus       202 ~~~~i~-s~~~~~~l~~iVkp~PP~nL~v~~~-~~~l~v~W~~P~~~-~~~~~L~Yevryr~~~~~~~--~~~~~-~~~~  275 (317)
T 3qt2_A          202 KHSAIR-PFDQLFALHAIDQINPPLNVTAEIE-GTRMSIQWEKPVSA-FPIHCFDYEVKIHNTRNGYL--QIEKL-MTNA  275 (317)
T ss_dssp             TTSCBC-CEEEEEEHHHHBCCCCCEEEEEEEE-TTEEEEEEECCSSS-SCGGGEEEEEEEEETTTCCE--EEEEE-SSSE
T ss_pred             CCcccc-ccceEEEHHHcCcCCCCceeEEEEe-CCcEEEEECCCCcc-cccCceEEEEEEEeCCCCcc--eEEEE-eeeE
Confidence            533211 2123344333344457889998854 58999999998532 22345799999998654322  11222 4456


Q ss_pred             EEecCCCCCceEEEEEEEeeCC-----C-CCCCCCcEEe
Q psy8771         777 FVLDELKKWTEYRIWVLAGTSI-----G-DGPSSYPITI  809 (904)
Q Consensus       777 ~~i~~L~p~t~Y~~~V~a~~~~-----g-~g~~s~~~~~  809 (904)
                      +.+ +|.+++.|.|+|||....     | .|++|.++.+
T Consensus       276 ~~l-~l~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~  313 (317)
T 3qt2_A          276 FIS-IIDDLSKYDVQVRAAVSSMCREAGLWSEWSQPIYV  313 (317)
T ss_dssp             EEE-ECCTTCCEEEEEEEEECTTTSSCCCCCCCCCCEEE
T ss_pred             EEe-ecCCCCEEEEEEEEeecCCCCCCCCcCCCCCCEEE
Confidence            655 499999999999999542     2 4566766655

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.46  E-value=3.4e-13  Score=117.80  Aligned_cols=115  Identities=18%  Similarity=0.229  Sum_probs=94.7

Q ss_pred             CCCCCCCcEEEecCCCCCCCCCCceEE-ecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEec
Q psy8771         563 GPGPLSAPVLVKTQQGVPSQPRDLRAV-DIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAW  641 (904)
Q Consensus       563 g~~~~S~~~~~~t~~~~p~~p~~~~~~-~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w  641 (904)
                      |.|++|..+.+.|....|.+|.++.+. ..+.+++.|+|.++...                                   
T Consensus         1 G~s~~S~~~~~~t~~~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~-----------------------------------   45 (120)
T 2crm_A            1 GSSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDN-----------------------------------   45 (120)
T ss_dssp             CCCTTCSCCSCCSCCCCCCCCCCCEEEEEEETTEEEEECCCCTTC-----------------------------------
T ss_pred             CCCCCcCCEEEEeCCCCCCCCCCCEEeeccCCCEEEEEECCCCcC-----------------------------------
Confidence            567889998888988889999998887 77888999999988641                                   


Q ss_pred             cCCCCCCCceeeEEEEEEeCCc-cccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771         642 SKPTHSGENIISYELYWNDTYA-KAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG  717 (904)
Q Consensus       642 ~~~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~  717 (904)
                           ++..+.+|.|+|+.... ..+........+.+++.+|.+++.|.|+|+|+|..|.|.+|..+.++|...+|.
T Consensus        46 -----gg~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~p~  117 (120)
T 2crm_A           46 -----GGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVSGP  117 (120)
T ss_dssp             -----CSSCCCEEEEEEEESSSSCCCEEEECSSCSEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCSCC
T ss_pred             -----CCCeeeEEEEEEccCCCCcCCEEEEeccccEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCCCC
Confidence                 23468899999988765 345445455678999999999999999999999999999999888888876554

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=5.5e-13  Score=115.33  Aligned_cols=104  Identities=24%  Similarity=0.366  Sum_probs=87.0

Q ss_pred             ecCCCCCCCCCCcEEEec--CCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC-CccEEEEec-CcceEEecCCCCCc
Q psy8771         711 TKQYVPGAPPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD-SEASIVTLK-NQTSFVLDELKKWT  786 (904)
Q Consensus       711 t~~~~p~~~P~~l~~~~~--~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-~~~~~~~~~-~~~~~~i~~L~p~t  786 (904)
                      |.+..|..+|.++++...  +.+++.|+|++|  ...+|.+.+|.|+|+...... ..+....+. ..+.++|.+|.|++
T Consensus         3 T~~~~P~~~P~~l~~~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t   80 (114)
T 2ede_A            3 SGSSGPTSAPKDLTVITREGKPRAVIVSWQPP--LEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDT   80 (114)
T ss_dssp             CCCCCCCSCCEEEEEEECSSCSSCEEEEEECC--SSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSC
T ss_pred             CCCCCCCCCCcceEEEEccCCCCEEEEEECCC--CCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCC
Confidence            667778778999999887  789999999999  467889999999998754321 222334444 88999999999999


Q ss_pred             eEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771         787 EYRIWVLAGTSIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       787 ~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P  816 (904)
                      .|.|+|+|.|..|.|++|..+.++|.+.+|
T Consensus        81 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p  110 (114)
T 2ede_A           81 MYYFRIQARNSKGVGPLSDPILFRTLKVSG  110 (114)
T ss_dssp             EEEEEEEEECSSCBCCCCCCEEEECCCSSC
T ss_pred             EEEEEEEEEeCCcCcCCcccEEEEecCCCC
Confidence            999999999999999999999999987765

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.45  E-value=4.6e-13  Score=117.60  Aligned_cols=111  Identities=26%  Similarity=0.425  Sum_probs=90.8

Q ss_pred             cCCCCCCCCCCeeEEecCC------CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEE
Q psy8771         696 SPRGEGATTPPIPVRTKQY------VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV  769 (904)
Q Consensus       696 ~~~G~~~~s~~~~~~t~~~------~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~  769 (904)
                      +..|.|.+|..+.++|.+.      +|. +|.+|++...+ +++.|+|++|.  ..||.+.+|.|+|+. +.  ......
T Consensus         2 t~~G~g~~S~~~~~~T~~~~~~~~~~P~-~P~~l~~~~~~-~sv~l~W~~P~--~~~g~i~~Y~v~y~~-~~--~~~~~~   74 (126)
T 1x5i_A            2 SSGSSGPATDWLSAETFESDLDETRVPE-VPSSLHVRPLV-TSIVVSWTPPE--NQNIVVRGYAIGYGI-GS--PHAQTI   74 (126)
T ss_dssp             CSCCCCCCCCCCCSCCCCTTSBCSSCCC-SCSEEEEEEET-TEEEEEEECCS--CTTBCCCEEEEEECS-SC--GGGEEE
T ss_pred             CCCccCCCCCCEEeECccccCccCCCCC-CCCeeEEEecC-CEEEEEEcCCC--CCCCCEeEEEEEEEc-CC--CCceEE
Confidence            3568899999999999987      777 78999999887 99999999994  568999999999983 22  223445


Q ss_pred             Eec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         770 TLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       770 ~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      .+. ..+.++|.+|+|++.|.|+|+|+|..|.|..+.. .+.|...
T Consensus        75 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~-~~~T~~~  119 (126)
T 1x5i_A           75 KVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYE-SAVTRPH  119 (126)
T ss_dssp             ECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCC-CEECCCC
T ss_pred             EeCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceee-EEecccC
Confidence            555 8899999999999999999999999999988864 4444433

>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E

Probab=99.45  E-value=5e-13  Score=143.21  Aligned_cols=228  Identities=10%  Similarity=-0.018  Sum_probs=148.9

Q ss_pred             CcceeeeccceEEEEecC---CCCCcceeeEeeCCCCCCCCcEEEeccCCceEEEEeCCCCC----CCceeccccccccc
Q psy8771           2 DTRCYVESPEEVFIILCP---LPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETP----NGQITHPPTRAARS   74 (904)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~~----~g~i~~~~~~~~~~   74 (904)
                      .|+|.+.+......+...   .+|..  .+    ..+....|.|...+.+.+.|.|.++...    ++.+........+.
T Consensus        81 ~Y~C~~~n~~~~~~l~V~~~~~~~~~--~v----~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d~  154 (363)
T 1wio_A           81 TYICEVEDQKEEVQLLVFGLTANSDT--HL----LQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDS  154 (363)
T ss_dssp             EEEEEETTEEEEEEEEEEEEEESSCS--SE----ESBSCEEEEEECCTTCCCCEEEECSSSCEEEESSEEEECSBCGGGC
T ss_pred             EEEEEEEECCCcEEEEEEeCCCCCce--EE----ecCCCEEEEEEcCCCCCCeEEEEcCCCcccccceEEEEeeCChhcC
Confidence            478999887553333222   11211  11    1125566777777788899999987533    33344444445555


Q ss_pred             ceEEEEeeeccCCeeeee--eeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc-----CCCCeEEEeeCCcccc
Q psy8771          75 HARLAAQSVLRRGRLAHA--VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG-----SPMPFVKWRKGQNIEL  147 (904)
Q Consensus        75 ~~~~~~~~~~~~g~~~~~--~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-----~p~p~i~W~k~~~~~~  147 (904)
                      ....|...+.  +.....  .+.+     ..+|..   +.. +.+.+|+.+.|.|.+.|     .|.|.|+|+|+ +..+
T Consensus       155 G~Y~C~a~~~--~~~~~~~~~l~v-----~~~p~~---~~~-~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~-g~~~  222 (363)
T 1wio_A          155 GTWTCTVLQN--QKKVEFKIDIVV-----LAFQKA---SSI-VYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAE-RASS  222 (363)
T ss_dssp             EECEEEEEET--TEEEEECCEECE-----ECCSCS---EEE-EEEETBCCEEEECCCCCCCCSSCEEEEEEEEES-SCCC
T ss_pred             CEEEEEEecC--CCeEEEEEEEEE-----ecCCCC---CCc-eEEecCCEEEEEEEEecccccCCCceeEEEecC-CCCc
Confidence            5555555443  333222  3333     223322   133 78899999999999888     88899999999 6555


Q ss_pred             CC--------CCceee------------c--ceEEEEeee--cCCeEEEEEEEec--CcceEEEEEEEEEeecCCCCCCC
Q psy8771         148 TP--------DDKLPV------------G--RNVLTLDRV--TESENYTCIAASV--LGVIETSTIVKVQCKYAPLLTLP  201 (904)
Q Consensus       148 ~~--------~~~~~~------------~--~~~l~i~~l--~d~g~Y~c~a~n~--~g~~~~~~~l~v~~~~~~~~~~P  201 (904)
                      ..        +.++.+            .  ...|.|.++  +|+|.|+|.|.|.  .|..+..+.|.|.       ..+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~-------~v~  295 (363)
T 1wio_A          223 SKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM-------RAT  295 (363)
T ss_dssp             CCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEE-------EEC
T ss_pred             cceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE-------Eec
Confidence            44        444443            2  348999999  7999999999999  9999999999988       455


Q ss_pred             CCCcceEEEeecCCe--EEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcC
Q psy8771         202 VAPLDVKISEVTATS--VRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNN  275 (904)
Q Consensus       202 ~~p~~l~~~~~~~~s--v~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~  275 (904)
                      +.+..|.+...+...  +.+.|..++..+..                     ...+.|.++.+.+.+.|+|.|.|.
T Consensus       296 g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~---------------------~~~l~i~~v~~~d~G~Y~C~a~~~  350 (363)
T 1wio_A          296 QLQKNLTCEVWGPTSPKLMLSLKLENKEAKV---------------------SKREKAVWVLNPEAGMWQCLLSDS  350 (363)
T ss_dssp             CCSSSEEEEEESSCCTTCCEEEECSSSSCSE---------------------EESSSEEEESSCCSEEEEEEECSS
T ss_pred             CCCeeEEEEEccccCCCccEEEEeCCCceee---------------------eeeeeeeeeccccceeEEEEEecC
Confidence            666777766554433  34777765433321                     134567889999999999999975

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=2.5e-13  Score=118.38  Aligned_cols=113  Identities=24%  Similarity=0.356  Sum_probs=91.3

Q ss_pred             CCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEe-c-CcceE
Q psy8771         700 EGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL-K-NQTSF  777 (904)
Q Consensus       700 ~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~-~-~~~~~  777 (904)
                      .+..+....++|.+.+|. +|.++.+...+.+++.|+|++|..   +|.+.+|.|+|+..+...+  ....+ . ..+.+
T Consensus         2 ss~~~~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~---~g~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~~   75 (118)
T 2yrz_A            2 SSGSSGSHDSRLTAGVPD-TPTRLVFSALGPTSLRVSWQEPRC---ERPLQGYSVEYQLLNGGEL--HRLNIPNPAQTSV   75 (118)
T ss_dssp             CCCCCSCCTTSSSCSCCC-CCCCCEECCCBTTEEEEECCCCCC---SSCEEEEEEEEEBSSSCCE--EEEEESCTTCCEE
T ss_pred             CCCCCCcceeecCCCCCC-CCCceEEEeCCCCEEEEEeCCCCC---CCCccEEEEEEEECCCCce--EEEEcCCCCcCEE
Confidence            344555677889998887 689999999999999999999953   3789999999998665333  22333 2 68999


Q ss_pred             EecCCCCCceEEEEEEEeeCCCCCCCCC-cEEeecCCCCCCC
Q psy8771         778 VLDELKKWTEYRIWVLAGTSIGDGPSSY-PITIRTHEDDPSE  818 (904)
Q Consensus       778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~-~~~~~t~~~~P~~  818 (904)
                      +|.+|+|++.|.|+|+|.|..|.|.+|. .+.+.|.+.+|++
T Consensus        76 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~~~ps~  117 (118)
T 2yrz_A           76 VVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVSGPSS  117 (118)
T ss_dssp             EEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSCCCCCC
T ss_pred             EeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCCCCCCC
Confidence            9999999999999999999999999987 6777777777753

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=5.7e-13  Score=113.90  Aligned_cols=101  Identities=21%  Similarity=0.346  Sum_probs=83.3

Q ss_pred             EecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccC-CCCccEEEEecCcceEEecCCCCCceE
Q psy8771         710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGR-SDSEASIVTLKNQTSFVLDELKKWTEY  788 (904)
Q Consensus       710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y  788 (904)
                      +|.+.+|. +|.+|++..++.++|.|+|++|.  ..+|.+.+|.|+|+..+. ........ ....+.++|.+|+|++.|
T Consensus         2 tT~~~~P~-~p~~l~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y   77 (109)
T 2e7h_A            2 SSGSSGPP-AVSDIRVTRSSPSSLSLAWAVPR--APSGAVLDYEVKYHEKGAEGPSSVRFL-KTSENRAELRGLKRGASY   77 (109)
T ss_dssp             CSSCCSSC-CCCCCEEEEEETTEEEEECCCCC--CSSSCCCEEEEEEEETTCCSTTTSEEE-EESSSEEEEESCCTTSCE
T ss_pred             CCCCCCCC-CCCccEEEecCCCEEEEEeCCCC--CCCCcEeEEEEEEEECCCCCCceeEEE-ccCCCEEEECCCCCCCeE
Confidence            46666777 48899999999999999999994  678999999999998762 22222222 126679999999999999


Q ss_pred             EEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         789 RIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       789 ~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      .|+|+|.|..|.|++|..+.++|.+.
T Consensus        78 ~~~V~A~n~~G~g~~S~~~~~~T~~~  103 (109)
T 2e7h_A           78 LVQVRARSEAGYGPFGQEHHSQTQLD  103 (109)
T ss_dssp             EEEEEEECSSCBCCCCSCEECCCCCC
T ss_pred             EEEEEEEeCCccCCCCCCEEEEcCCC
Confidence            99999999999999999999999764

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.45  E-value=5.8e-13  Score=117.47  Aligned_cols=114  Identities=23%  Similarity=0.390  Sum_probs=94.2

Q ss_pred             CCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcce------EEEeecCceE
Q psy8771         469 TPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAW------ETQVVDNNQL  540 (904)
Q Consensus       469 s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~------~~~~~~~~~~  540 (904)
                      |..+.++|....|+.+|.++++...+.+++.|+|++|..  .+|.+.+|.|+|+.........|      ........+.
T Consensus         2 S~~v~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
T 1uen_A            2 SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTH   81 (125)
T ss_dssp             CCCCCCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSE
T ss_pred             CccEEEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccE
Confidence            455777888888888999999999999999999999843  56789999999988764433222      2233467788


Q ss_pred             EEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCC
Q psy8771         541 TTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ  582 (904)
Q Consensus       541 ~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~  582 (904)
                      +.|.+|.|++.|.|+|+|+|..|.|++|..+.++|..+.|..
T Consensus        82 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~  123 (125)
T 1uen_A           82 GMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPS  123 (125)
T ss_dssp             EEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSSC
T ss_pred             EEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCCCCC
Confidence            999999999999999999999999999999999998877754

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.45  E-value=7.3e-13  Score=115.00  Aligned_cols=111  Identities=26%  Similarity=0.416  Sum_probs=90.3

Q ss_pred             CCCCCcEEEecCC--CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771         565 GPLSAPVLVKTQQ--GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS  642 (904)
Q Consensus       565 ~~~S~~~~~~t~~--~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~  642 (904)
                      |++|..+.++|..  ..|.+|.++++...+.+++.|+|.++..                                     
T Consensus         1 G~~S~~~~~~T~~~~~~P~~P~~l~~~~~~~~si~l~W~~p~~-------------------------------------   43 (116)
T 1x5g_A            1 GSSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVS-------------------------------------   43 (116)
T ss_dssp             CCCCCCCCCSSCCCSSCCCCCSSCEEEEEETTEEEEECCCCSC-------------------------------------
T ss_pred             CCCccCeEEEcCCCCCCCcCCCccEEEecCCCEEEEEEeCCCC-------------------------------------
Confidence            3567777777742  5778889999988888999999998864                                     


Q ss_pred             CCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771         643 KPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG  717 (904)
Q Consensus       643 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~  717 (904)
                          .++.+.+|.|+|+..+...+... ......+.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|...+|.
T Consensus        44 ----~~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~  113 (116)
T 1x5g_A           44 ----GNGEIQNYKLYYMEKGTDKEQDV-DVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSGP  113 (116)
T ss_dssp             ----CSSCCSEEEEEEEETTCCCCCCE-EECSSEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSSCC
T ss_pred             ----CCCcccEEEEEEEECCCCccEEE-ecCCceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCCCC
Confidence                45678888888888765544322 33467999999999999999999999999999999999999988776

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}

Probab=99.44  E-value=4e-12  Score=121.91  Aligned_cols=164  Identities=16%  Similarity=0.192  Sum_probs=110.7

Q ss_pred             CCCeEEcCCCCceEEec-CCCeEEEEEEccCCC--CeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         103 VPPQFSIPPPALLEVML-DSPLNLSCVAVGSPM--PFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~-g~~~~l~C~~~g~p~--p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      .||.|...+.  ..+.+ |+++.|.|.+.|.|.  +.|.|+|+ +..+....+.. .++.|.|.++  +|+|.|+|.|.|
T Consensus         2 ~~P~i~~~~~--~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~-~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n   77 (190)
T 2wv3_A            2 NEPRIVTSEE--VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKN-GVELTATRKNA-SNMEYRINKPRAEDSGEYHCVYHF   77 (190)
T ss_dssp             -CCEEEECCC--EECCCSSSCEEEEEEEEECSSCEEEEEEEET-TEECTTCCBCC-SEEEEEESSCCGGGCEEEEEEEEE
T ss_pred             CCCcccccce--EEEccCCceEEEEEEeccCCCCceEEEEEEC-CEECcccceEe-ccEEEEEecCCcccCEEEEEEEEe
Confidence            3788877554  66666 999999999999987  88999999 66666544333 6789999999  699999999999


Q ss_pred             cCcceEEEEEEEEEeecCCCCCCCC---CCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCC-------CCCCeEEe
Q psy8771         178 VLGVIETSTIVKVQCKYAPLLTLPV---APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKA-------ANTPYSEI  247 (904)
Q Consensus       178 ~~g~~~~~~~l~v~~~~~~~~~~P~---~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~-------~~~~~~~~  247 (904)
                      . |.....+.|.|.       ..|.   .+....+  .....+.|.+...+.+...+.+.....+       ....+...
T Consensus        78 ~-~~~~~~~~l~V~-------~~p~~~~~~~~~~~--~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~  147 (190)
T 2wv3_A           78 V-SAPKANATIEVK-------AAPDITGHKRSENK--NEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFII  147 (190)
T ss_dssp             T-TEEEEEEEEEEE-------CCCEEEEECSEEEE--ETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEE
T ss_pred             C-CcccccEEEEEe-------cCCcccccCCccee--eCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEe
Confidence            9 888888888888       3221   1222222  2334455555543222222222221111       12233333


Q ss_pred             ecceeceEEEcCCC-CCCeEEEEEEEEcCCCCCC
Q psy8771         248 SGIITTYYTVRNLS-PYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       248 ~~~~~~~~~i~~L~-p~~~Y~~~v~a~n~~g~s~  280 (904)
                      .......+.|.++. ..+.+.|+|.|.|..|...
T Consensus       148 ~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~  181 (190)
T 2wv3_A          148 NKENYTELNIVNLQITEDPGEYECNATNSIGSAS  181 (190)
T ss_dssp             ECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEE
T ss_pred             cCCCeeEEEEEeccccCCCEEEEEEEEecCCcce
Confidence            33334579999999 7999999999999988643

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.44  E-value=8.9e-13  Score=115.09  Aligned_cols=106  Identities=25%  Similarity=0.457  Sum_probs=87.0

Q ss_pred             eeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCC
Q psy8771         707 IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKW  785 (904)
Q Consensus       707 ~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~  785 (904)
                      ..+.+...+|. +|.++.+...+.+++.|+|++|.  ..++.+.+|.|+|+..+...+. ...... ..+.+.|.+|+|+
T Consensus         9 ~~~~~~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~   84 (119)
T 2ed7_A            9 PAIPSSSVLPS-APRDVVPVLVSSRFVRLSWRPPA--EAKGNIQTFTVFFSREGDNRER-ALNTTQPGSLQLTVGNLKPE   84 (119)
T ss_dssp             SSCCCSSSSCC-CCSCCEEEEECSSCEEEECCCCS--CCSSCEEEEEEEEEESSCCCCE-EEECCCTTCCEEEECSCCSS
T ss_pred             ccCCCCCCCCc-CCcceEEEecCCCEEEEEEeCCC--CCCCcEEEEEEEEEeCCCCcce-eeEeecCCceEEEeCCCCCC
Confidence            34556777775 78999999999999999999984  5688999999999987654432 222222 7889999999999


Q ss_pred             ceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771         786 TEYRIWVLAGTSIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       786 t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P  816 (904)
                      +.|.|+|+|.|..|.|.+|+.+.++|.+..|
T Consensus        85 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p  115 (119)
T 2ed7_A           85 AMYTFRVVAYNEWGPGESSQPIKVATQPESG  115 (119)
T ss_dssp             SEEEECCEEEESSCBCSCCCCEEEECCCCSC
T ss_pred             CEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence            9999999999999999999999999976543

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.44  E-value=4e-13  Score=117.18  Aligned_cols=105  Identities=30%  Similarity=0.474  Sum_probs=89.7

Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceE
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSF  777 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~  777 (904)
                      |.|.+|..+.++|.+.+|. +|.++++...+.+++.|+|++|.  ..+|.+.+|.|+|+..+.... .....+. ..+.+
T Consensus         1 G~g~~S~~~~~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~   76 (119)
T 1wfn_A            1 GSSGSSGPQLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQEPG--EKNGILTGYRISWEEYNRTNT-RVTHYLPNVTLEY   76 (119)
T ss_dssp             CCCCCSCCCSCCSSCCSCC-CCSCCEEESCCSSEEEEECCCCT--TCCSCCCEEEEEEEESSCGGG-CCCEEECSSCCEE
T ss_pred             CCCCCCCCEEEECCCCCCC-CCCceEEEECCCCEEEEEEcCCC--CCCCcEEEEEEEEEECCCCCc-eEEEEeCCCceEE
Confidence            6788899999999999887 57899999999999999999984  678999999999998764322 1223444 88899


Q ss_pred             EecCCCCCceEEEEEEEeeCCCCCCCCCcE
Q psy8771         778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPI  807 (904)
Q Consensus       778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~  807 (904)
                      +|.+|++++.|.|+|+|.|..|.|.+|..+
T Consensus        77 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~  106 (119)
T 1wfn_A           77 RVTGLTALTTYTIEVAAMTSKGQGQVSAST  106 (119)
T ss_dssp             EEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred             EEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence            999999999999999999999999998866

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.44  E-value=1.4e-12  Score=113.27  Aligned_cols=113  Identities=24%  Similarity=0.391  Sum_probs=92.1

Q ss_pred             CCCCCceeeec-CCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcC
Q psy8771         467 ATTPPIPVRTK-QYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISD  545 (904)
Q Consensus       467 ~~s~~~~~~t~-~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  545 (904)
                      ..|..+.++|. ...+|.+|.++.+...+.+++.|+|++|...++.+.+|.|+|+..+...   |.. .....+.+.|.+
T Consensus         2 ~~S~~~~~~T~~~~~~P~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~---~~~-~~~~~~~~~i~~   77 (116)
T 1x5g_A            2 SSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDK---EQD-VDVSSHSYTING   77 (116)
T ss_dssp             CCCCCCCCSSCCCSSCCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCC---CCC-EEECSSEEEECS
T ss_pred             CCccCeEEEcCCCCCCCcCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCc---cEE-EecCCceEEEcC
Confidence            45666777774 2234578999999999999999999999877789999999999876432   222 234577899999


Q ss_pred             CCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         546 LTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       546 L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      |.|++.|.|+|+|+|..|.|.+|..+.++|....|.++
T Consensus        78 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~p~  115 (116)
T 1x5g_A           78 LKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSGPSS  115 (116)
T ss_dssp             CCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSSCCCC
T ss_pred             CCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCCCCCC
Confidence            99999999999999999999999999999988777654

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.44  E-value=1.2e-12  Score=111.86  Aligned_cols=101  Identities=23%  Similarity=0.318  Sum_probs=85.2

Q ss_pred             EecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceE
Q psy8771         710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEY  788 (904)
Q Consensus       710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y  788 (904)
                      +|.+.+|. +|.+|++...+.+++.|+|++|  ...+|.+.+|.|+|+..+...+..  ..+. ..+.+.|.+|.|++.|
T Consensus         2 tT~~~~P~-~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y   76 (108)
T 2djs_A            2 SSGSSGPS-TVPIMHQVSATMRSITLSWPQP--EQPNGIILDYEIRYYEKEHNEFNS--SMARSQTNTARIDGLRPGMVY   76 (108)
T ss_dssp             CSCCCCCC-CCSCCEEEEECSSEEEEECCCC--SCCSSCEEEEEEEEEETTSCSTTC--EEEEESSSEEEEESCCTTCEE
T ss_pred             ccCCCCCC-CCcceEEEecCCCEEEEEECCC--CCCCCeEEEEEEEEEECCCCCcce--eEEecCccEEEEcCCCCCCEE
Confidence            36667777 6889999999999999999999  467899999999999876543322  2333 7899999999999999


Q ss_pred             EEEEEEeeCCCCCCCCCcEEeecCCCC
Q psy8771         789 RIWVLAGTSIGDGPSSYPITIRTHEDD  815 (904)
Q Consensus       789 ~~~V~a~~~~g~g~~s~~~~~~t~~~~  815 (904)
                      .|+|+|.|..|.|++|.++.++|.++.
T Consensus        77 ~~~V~A~n~~G~g~~S~~~~~~T~~~~  103 (108)
T 2djs_A           77 VVQVRARTVAGYGKFSGKMCFQTLTDS  103 (108)
T ss_dssp             EEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred             EEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence            999999999999999999999997654

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A

Probab=99.44  E-value=5.4e-13  Score=128.57  Aligned_cols=170  Identities=18%  Similarity=0.260  Sum_probs=114.3

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC----ceee--cceEEEEeee--cCCeEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD----KLPV--GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~----~~~~--~~~~l~i~~l--~d~g~Y~c  173 (904)
                      ..||.|...|.. +.+.+|++++|.|.+.|.|.+.|.|+|+ +..+....    ++..  +...|.|.++  +|+|.|+|
T Consensus         3 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C   80 (194)
T 2a38_A            3 TQAPTFTQPLQS-VVVLEGSTATFEAHISGFPVPEVSWFRD-GQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSL   80 (194)
T ss_dssp             CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEES-SSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred             CCCCeEEccCCc-eEEECCCEEEEEEEEEecCCCEEEEEEC-CEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEE
Confidence            467889998888 9999999999999999999999999999 66665432    2222  3458999999  69999999


Q ss_pred             EEEecCcceEEEEEEEEEeecC-CCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEee
Q psy8771         174 IAASVLGVIETSTIVKVQCKYA-PLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEIS  248 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~~~~~-~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~  248 (904)
                      .+.|..|.......|.|..... |...  ..+....+  .....+.|.+...+.+...  +.|...+.    ...+....
T Consensus        81 ~~~n~~~~~~~~~~l~v~~~~~~p~~~--~~~~~~~~--~~g~~~~l~C~~~g~p~~~--v~W~~~~~~~~~~~~~~~~~  154 (194)
T 2a38_A           81 KATNGSGQATSTAELLVKAETAPPNFV--QRLQSMTV--RQGSQVRLQVRVTGIPTPV--VKFYRDGAEIQSSLDFQISQ  154 (194)
T ss_dssp             EEEETTEEEEEEEEEEEECCCEEEEEE--ECCCCEEE--CTTEEEEEEEEEEEESCCE--EEEEETTEECCCSSSEEEEE
T ss_pred             EEEcCCceEeEEEEEEEccCCCCCEEE--eCCccEEE--cCCCEEEEEEEEEEecCCe--EEEEECCEECCCCCcEEEEE
Confidence            9999999888888888872100 0000  11222222  2233455555543222222  33433321    22233223


Q ss_pred             cceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         249 GIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ......+.|.++.+.+.+.|+|.|.|..|..
T Consensus       155 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~  185 (194)
T 2a38_A          155 EGDLYSLLIAEAYPEDSGTYSVNATNSVGRA  185 (194)
T ss_dssp             ETTEEEEEEEEECGGGCEEEEEEEEETTEEE
T ss_pred             cCCEEEEEECCCChhcCeEEEEEEEeCCCce
Confidence            3333579999999999999999999998864

>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*

Probab=99.44  E-value=3.2e-12  Score=144.59  Aligned_cols=307  Identities=10%  Similarity=0.018  Sum_probs=173.5

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEc
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSI  109 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~  109 (904)
                      ....|.|...+    .|.|.+....      ++.++.......+.....|...+   |....+.+.|.     .||.+..
T Consensus        52 ~~v~l~C~~~~----~v~W~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n---g~~~~~~l~V~-----~p~~~~~  119 (524)
T 2ec8_A           52 DEIRLLCTDPG----FVKWTFEILDETNENKQNEWITEKAEATNTGKYTCTNKH---GLSNSIYVFVR-----DPAKLFL  119 (524)
T ss_dssp             SCEEEEEECTT----EEEEEEESSSCCEEECSSEEEESSCCSTTCEEEEEEETT---SCEEEEEEECC-----CSSCSBC
T ss_pred             CeEEEEEeCCc----eEEEcCCCccccccCccceEEEcccchhhCEEEEEeecC---CcceEEEEEEC-----CCCcccc
Confidence            45555555543    8999876432      33355444555555555555544   55555566653     4455555


Q ss_pred             CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCe-EEEEEEEecCcceE-E
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESE-NYTCIAASVLGVIE-T  184 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g-~Y~c~a~n~~g~~~-~  184 (904)
                      .+.+ +.+.+|+.+.|.|.+.|.|.+.|+|++.++..+..+.++.. .++.|.|.++  +|+| .|+|.|.|..|... .
T Consensus       120 ~~~~-~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~  198 (524)
T 2ec8_A          120 VDRS-LYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSE  198 (524)
T ss_dssp             CCCC-CCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCC
T ss_pred             cccc-eEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEE
Confidence            6666 88999999999999999888999998833777777777765 5778999999  6999 99999999877653 3


Q ss_pred             EEEEEEEee--cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC--CCeEE---e----ecceec
Q psy8771         185 STIVKVQCK--YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN--TPYSE---I----SGIITT  253 (904)
Q Consensus       185 ~~~l~v~~~--~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~--~~~~~---~----~~~~~~  253 (904)
                      .+.|.|...  ..|.+.  ..|....+  .....++|.+...+.+.. ..+.|...+..  .....   .    ......
T Consensus       199 ~~~l~V~~~~~~~p~i~--~~~~~~~v--~~G~~v~L~C~~~g~p~p-~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (524)
T 2ec8_A          199 KFILKVRPAFKAVPVVS--VSKASYLL--REGEEFTVTCTIKDVSSS-VYSTWKRENSQTKLQEKYNSWHHGDFNYERQA  273 (524)
T ss_dssp             CEECCEECCCCSCCEEE--CSCSEEEE--ETTSCEEEEEEEEESSTT-CEEEEEETTCSCCCCEEEEEEECSSSCEEEEE
T ss_pred             EEEEEEEeCCCCCCcEE--ecCCcceE--EcCCcEEEEEEEecCCCc-EEEEEEeCCCCCccccccccccccCCccceEE
Confidence            667777510  001110  12233323  233455555554322211 12444444333  11111   1    123347


Q ss_pred             eEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCC--CCCCCceEecccCCCeeEEEecCCCCCCce-eeEEEE
Q psy8771         254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP--GTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITAKHH  330 (904)
Q Consensus       254 ~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p--~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~-~~~~~~  330 (904)
                      .+.|.++...+.+.|+|.|.|..|.......+.+...+...  +..+....+.  ....+.|.+.....+... +.++..
T Consensus       274 ~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~--~G~~v~l~C~~~g~P~p~~v~W~k~  351 (524)
T 2ec8_A          274 TLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVN--DGENVDLIVEYEAFPKPEHQQWIYM  351 (524)
T ss_dssp             EEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEEC--TTCCEEEEEEEEEESCCCEEEEESS
T ss_pred             EEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEc--CCCcEEEEEEEeecCCCcEEEEEEC
Confidence            89999999999999999999988865432223332111100  0011122222  223344444322222222 332211


Q ss_pred             -------------Eeec----eeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         331 -------------RRIG----LVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       331 -------------~~~~----~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                                   ....    ....+.|..+.....-.+++.|.|..|.
T Consensus       352 g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~  400 (524)
T 2ec8_A          352 NRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVN  400 (524)
T ss_dssp             SCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred             CeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCce
Confidence                         0000    2357888888888888888999887764

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A

Probab=99.43  E-value=1.1e-12  Score=129.17  Aligned_cols=187  Identities=18%  Similarity=0.186  Sum_probs=126.5

Q ss_pred             CCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEe
Q psy8771         581 SQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWND  660 (904)
Q Consensus       581 ~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~  660 (904)
                      .+|.+|.+...+...+.++|.++..                                         .++...+|.+.|+.
T Consensus        22 ~~P~nl~C~~~~~~~l~C~W~~~~~-----------------------------------------~~~~~~~y~l~y~~   60 (227)
T 1eer_B           22 RGPEELLCFTERLEDLVCFWEEAAS-----------------------------------------AGVGPGQYSFSYQL   60 (227)
T ss_dssp             HSTTSCEEEBSSSSCCEEEEEESCC-----------------------------------------SSCCTTSEEEEEEE
T ss_pred             cCCcCCeEECCCCCEEEEEecCCCC-----------------------------------------CCCCCccEEEEEEc
Confidence            3688999888888889999998754                                         22345677777776


Q ss_pred             CCcccc-c--eEEe----cccceEEE--eCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecC-C
Q psy8771         661 TYAKAK-H--HRRI----GLVETYSL--TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLS-S  730 (904)
Q Consensus       661 ~~~~~~-~--~~~~----~~~~~~~l--~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~-~  730 (904)
                      .+.... .  ....    .....+.+  .++..++.|.|+|.|.+..  +..  ...+.....++..||.+|++...+ .
T Consensus        61 ~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~~V~a~~~~--~~~--~~~~~~~~~v~p~pP~~l~~~~~~~~  136 (227)
T 1eer_B           61 EDEPWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELRVTAASGA--PRY--HRVIHINEVVLLDAPVGLVARLADES  136 (227)
T ss_dssp             TTSCCEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEEEEEETTSC--EEE--EEEECGGGSEECCCCEEEEEEECSST
T ss_pred             CCCCceeccceeccCCCCCceEEEEeCCCcceeeEEEEEEEEecCCC--ccE--EEEEEeeeeEccCcCcceEEEEcCCC
Confidence            432210 0  0000    11233444  5778899999999996532  211  233444444455689999998874 7


Q ss_pred             CEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCC----C-CCCCCC
Q psy8771         731 TSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSI----G-DGPSSY  805 (904)
Q Consensus       731 ~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~----g-~g~~s~  805 (904)
                      +.+.|+|++|.... ...+..|+|+|+..++..+..........+.+.|.+|++++.|.|+|+|....    | .|.+|.
T Consensus       137 ~~l~v~W~~P~~~~-~~~~l~Yev~y~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~  215 (227)
T 1eer_B          137 GHVVLRWLPPPETP-MTSHIRYEVDVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSE  215 (227)
T ss_dssp             TCEEEEEECCSSCS-CGGGEEEEEEEECCSSSCCCCEEEECTTCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCC
T ss_pred             CeEEEEEcCCCCcc-cccceEEEEEEEcCCCCCcEEEEEEecCceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCC
Confidence            99999999996322 22378999999977654443322223377899999999999999999999742    3 388999


Q ss_pred             cEEeecCC
Q psy8771         806 PITIRTHE  813 (904)
Q Consensus       806 ~~~~~t~~  813 (904)
                      ++.+.|..
T Consensus       216 ~~~~~t~~  223 (227)
T 1eer_B          216 PVSLLTPS  223 (227)
T ss_dssp             CEEEEC--
T ss_pred             CEEEECcc
Confidence            99999844

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}

Probab=99.43  E-value=3e-12  Score=132.41  Aligned_cols=231  Identities=16%  Similarity=0.208  Sum_probs=139.6

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC----CC-----------ceecccccccccceEEEEeeeccCCe-eeeeeeeccCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP----NG-----------QITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQVADP   99 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~----~g-----------~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~   99 (904)
                      ....|.|...+.+. .+.|.+....    +.           .+........|.....|...+..... .....+.+   
T Consensus        20 ~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v---   95 (291)
T 2wim_A           20 ESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEI---   95 (291)
T ss_dssp             CCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEE---
T ss_pred             CcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEe---
Confidence            56666776666654 8999874211    11           12222333344444445444432222 22334443   


Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC--CCCceee-cceEEEEeee--cCCeEEEEE
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPV-GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~-~~~~l~i~~l--~d~g~Y~c~  174 (904)
                        ..+|.+...+.. ..+.+|+.+.|.|.+.|.|.+.|.|+++ +..+.  ...++.. .++.|.|.++  +|+|.|+|.
T Consensus        96 --~~~~~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~  171 (291)
T 2wim_A           96 --YQKLTFREVVSP-QEFKQGEDAEVVCRVSSSPAPAVSWLYH-NEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCE  171 (291)
T ss_dssp             --ECCCBCCSCCCS-EEEETTSCEEECCCCBCSSCCEEEEECC-----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEE
T ss_pred             --cCCcceEeCCCC-hhhcCCCCEEEEEEEccCCCCEEEEEEC-CccccccCCceEEEccCCCEEEEecchhhCEEEEEE
Confidence              456777777777 8899999999999999999999999999 55443  2344443 5778999998  699999999


Q ss_pred             EEecCcceEE--EEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEee
Q psy8771         175 AASVLGVIET--STIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEIS  248 (904)
Q Consensus       175 a~n~~g~~~~--~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~  248 (904)
                      |.|..+....  ...+.+.  ..|....+..+.  .........+.|.+...+.+...  +.|...+.    ...+. . 
T Consensus       172 ~~n~~~~~~~~~~~~~~v~--~~p~~~~~~~~~--~~~~~~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~~~~~~-~-  243 (291)
T 2wim_A          172 GRVEARGEIDFRDIIVIVN--VPPAISMPQKSF--NATAERGEEMTFSCRASGSPEPA--ISWFRNGKLIEENEKYI-L-  243 (291)
T ss_dssp             EEETTTTEEEEEEEEEEEE--BCCCCBCSCSEE--ECCSSSCCEEEEECBCCCBSCCE--EEEEETTEECCCTTTEE-E-
T ss_pred             EEECCCCeeEEeeEEEEec--cCCccccCcccc--cceecCCCeEEEEEEeecCCCCe--EEEEECCEECcCCccEE-E-
Confidence            9998865443  3444444  322222221111  11223345677777766444333  44443321    11111 1 


Q ss_pred             cceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771         249 GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS  282 (904)
Q Consensus       249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s  282 (904)
                      ......+.|.++...+.+.|+|.|.|..|....+
T Consensus       244 ~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~  277 (291)
T 2wim_A          244 KGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQ  277 (291)
T ss_dssp             CSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEE
T ss_pred             cCCccEEEEeeCCcccCEEEEEEEEECCCceeee
Confidence            1223679999999999999999999999976433

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A

Probab=99.43  E-value=1.8e-12  Score=134.14  Aligned_cols=231  Identities=15%  Similarity=0.144  Sum_probs=137.8

Q ss_pred             CCCCcEEEeccCC-ceEEEEeCCCC-----CCC------------ceecccccccccceEEEEeeeccCCe-eeeeeeec
Q psy8771          36 APRDVQVRPLSSS-TMVIQWDEPET-----PNG------------QITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQV   96 (904)
Q Consensus        36 ~p~~l~~~~~~~~-s~~v~W~~~~~-----~~g------------~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v   96 (904)
                      ....|.|...+.+ .+.|.|.+...     ..+            .+........|.....|...+...+. ...+.+.+
T Consensus        18 ~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v   97 (291)
T 1qz1_A           18 ESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI   97 (291)
T ss_dssp             CCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred             CeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEe
Confidence            4556666665654 68999987311     111            12222333444444555555444332 22333443


Q ss_pred             cCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC--CCcee-ecceEEEEeee--cCCeEE
Q psy8771          97 ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP--DDKLP-VGRNVLTLDRV--TESENY  171 (904)
Q Consensus        97 ~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~--~~~~~-~~~~~l~i~~l--~d~g~Y  171 (904)
                           ..+|.+...|.. ..+.+|+.+.|.|.+.|.|.|.|.|+++ +..+..  ..++. ..++.|.|.++  +|+|.|
T Consensus        98 -----~~~~~~~~~~~~-~~~~~g~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y  170 (291)
T 1qz1_A           98 -----FQKLMFKNAPTP-QEFKEGEDAVIVCDVVSSLPPTIIWKHK-GRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTY  170 (291)
T ss_dssp             -----ECCSEEEECCSS-EEEETTSCEEECCEEECSSCCEEEEEET-TSCSSTTCCTTEEECTTSCEEETTCCGGGCEEE
T ss_pred             -----eccccccCCCCc-ccccCCCeEEEEEEeccCCCCEEEEEEC-CEEcccCCCceEEEccCCcEEEccCccccCeEE
Confidence                 467888888887 8999999999999999999999999999 554432  33443 46778999999  699999


Q ss_pred             EEEEEecCcceE--EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCC------
Q psy8771         172 TCIAASVLGVIE--TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTP------  243 (904)
Q Consensus       172 ~c~a~n~~g~~~--~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~------  243 (904)
                      +|.|.|..+...  ....|.|.  ..|.......+.+.  .......++|.+...+.+...  +.|...+....      
T Consensus       171 ~C~a~n~~~~~~~~~~~~l~v~--~~p~~~~~~~~~~~--~~~~g~~v~l~C~~~g~p~p~--i~W~~~g~~~~~~~~~~  244 (291)
T 1qz1_A          171 RCEGRILARGEINFKDIQVIVN--VPPTVQARQSIVNA--TANLGQSVTLVCDADGFPEPT--MSWTKDGEPIENEEEDD  244 (291)
T ss_dssp             EEEEEEGGGTEEEEEEEEEEEE--EEEEEEESCSEEEE--ETTSCCCEEEEEEEEEESCCE--EEEEETTEECCCC--CC
T ss_pred             EEEEEecCCCceeeEEEEEEEe--cCCccccccccccc--ccccCceEEEEEEEEEeCCCc--EEEEECCEECcCCCCCC
Confidence            999999775433  34455554  22211111111111  112234455555543222222  33333221100      


Q ss_pred             eEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         244 YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       244 ~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...........+.|.++...+.+.|+|.|.|..|..
T Consensus       245 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~  280 (291)
T 1qz1_A          245 EKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQ  280 (291)
T ss_dssp             SSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred             cceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCce
Confidence            011111223679999999999999999999998864

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.43  E-value=1.4e-12  Score=110.67  Aligned_cols=102  Identities=22%  Similarity=0.334  Sum_probs=78.1

Q ss_pred             cCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeE
Q psy8771         575 TQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISY  654 (904)
Q Consensus       575 t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y  654 (904)
                      |...+|.+|.++++..++.+++.|+|.++.+                                         ++..+.+|
T Consensus         3 t~~~~P~~P~~~~~~~~s~~sv~l~W~~p~~-----------------------------------------~g~~i~~Y   41 (106)
T 1x4x_A            3 SGSSGPDQCKPPQVTCRSATCAQVNWEVPLS-----------------------------------------NGTDVTEY   41 (106)
T ss_dssp             SSCCSCCCCCCCCCEEEETTEEEEECCCCSC-----------------------------------------SSSCCCEE
T ss_pred             CCCCCcCCCCCCEEEEcCCCEEEEEEcCCCC-----------------------------------------CCCcceEE
Confidence            3445666777777777777777777776653                                         44478888


Q ss_pred             EEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC
Q psy8771         655 ELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA  718 (904)
Q Consensus       655 ~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~  718 (904)
                      .|+|+..... +........+.+.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|...+|..
T Consensus        42 ~v~~~~~~~~-~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~P~~  104 (106)
T 1x4x_A           42 RLEWGGVEGS-MQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSSGPS  104 (106)
T ss_dssp             EEEEESSTTS-CCEEEEESCSEEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCCSCC
T ss_pred             EEEEEcCCCc-eEEEEeCCcceEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCCcCC
Confidence            8888766532 33334455679999999999999999999999999999999999999887763

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=1.6e-12  Score=113.19  Aligned_cols=114  Identities=19%  Similarity=0.260  Sum_probs=90.4

Q ss_pred             CCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCcee----eEEEEEEeCCCCCCcceEEEeecCceEE
Q psy8771         466 GATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT----GYKVYYTQDQSLPMSAWETQVVDNNQLT  541 (904)
Q Consensus       466 ~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~----~Y~v~~~~~~~~~~~~~~~~~~~~~~~~  541 (904)
                      +..|....+.+....|+.+|.+|++...+.++|.|+|.++...++.+.    +|+|+|+...... ..|... ....+++
T Consensus         3 ~~~s~~~~~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~-~~~~~~-~~~~~~~   80 (123)
T 2edd_A            3 SGSSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSAS-AKYKSE-DTTSLSY   80 (123)
T ss_dssp             SCCSCCCCSCSSCCCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTT-CCCCCE-EESSSEE
T ss_pred             CccCCCCcCCCccCCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCC-ccEEEE-eCCceEE
Confidence            344555666666677889999999999999999999998765554444    9999999864321 223222 2357889


Q ss_pred             EEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCC-CCC
Q psy8771         542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQG-VPS  581 (904)
Q Consensus       542 ~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~-~p~  581 (904)
                      .|.+|+|++.|.|+|+|+|..|.|++|..+.++|... +|.
T Consensus        81 ~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~~~Ps  121 (123)
T 2edd_A           81 TATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASGPS  121 (123)
T ss_dssp             EEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCSSSCC
T ss_pred             EecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCCCCCC
Confidence            9999999999999999999999999999999999887 765

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}

Probab=99.43  E-value=1.7e-12  Score=125.31  Aligned_cols=172  Identities=19%  Similarity=0.220  Sum_probs=118.5

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~  174 (904)
                      +..+|.|...+.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+....++.+.    ...|.|.++  +|+|.|+|.
T Consensus         4 ~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~   81 (197)
T 3lcy_A            4 SGEAPGIRKEMKD-VTTKLGEAAQLSCQIVGRPLPDIKWYRF-GKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCI   81 (197)
T ss_dssp             CCEEEEEEECCCC-EEEETTSEEEEEEEEEEESCCEEEEEET-TEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEE
T ss_pred             cCCCCcccccCCc-eEEeCCCcEEEEEEEecCCCCEEEEEEC-CEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEE
Confidence            4578899999988 9999999999999999999999999999 6666666665542    228999999  699999999


Q ss_pred             EEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCC----CCCCeEEeecc
Q psy8771         175 AASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKA----ANTPYSEISGI  250 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~----~~~~~~~~~~~  250 (904)
                      +.|..|.......|.|.......... ..+..+.+  .....+.|.+...+.+...  +.|...+    ....+......
T Consensus        82 ~~n~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~~--~~g~~~~l~C~~~~~p~p~--v~W~~~~~~~~~~~~~~~~~~~  156 (197)
T 3lcy_A           82 ATNEVGEVETSSKLLLQATPQFHPGY-PLKEKYYG--AVGSTLRLHVMYIGRPVPA--MTWFHGQKLLQNSENITIENTE  156 (197)
T ss_dssp             EECSSCEEEEEEEEEEEEEEEECTTS-CCCSEEEE--ETTSCEEEEEEEEEESCCE--EEEEETTEECCCCSSEEEEECS
T ss_pred             EECCCCceeEEEEEEEEcCCCCCCCc-cCCcceee--cCCCeEEEEEEEeeeeCCe--eEEeECCEECCCCCceEEEEcC
Confidence            99999998888888887432211111 11222322  2344555555543222222  3333322    12222322333


Q ss_pred             eeceEEEcCCCC-CCeEEEEEEEEcCCCCC
Q psy8771         251 ITTYYTVRNLSP-YTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       251 ~~~~~~i~~L~p-~~~Y~~~v~a~n~~g~s  279 (904)
                      ....+.|.++.. .+.+.|+|.|.|..|..
T Consensus       157 ~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~  186 (197)
T 3lcy_A          157 HYTHLVMKNVQRKTHAGKYKVQLSNVFGTV  186 (197)
T ss_dssp             SEEEEEESSCCHHHHCEEEEEEEECSSCEE
T ss_pred             CEEEEEEccccchhhCceEEEEEEcCcCce
Confidence            346799999985 78999999999998864

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=99.42  E-value=4.5e-12  Score=123.01  Aligned_cols=190  Identities=16%  Similarity=0.107  Sum_probs=138.0

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEE---ecccceEEEeCCC--CCcEEEEEEEE
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRR---IGLVETYSLTGLY--PNTLYYIWLAA  694 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~---~~~~~~~~l~~L~--p~t~Y~v~V~a  694 (904)
                      ..++|+||++...+...+ |.|.++...++....|.|+|...+...|....   ....+.+.|.++.  +...|.++|+|
T Consensus         8 ~lp~P~nv~~~s~n~~~i-L~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~A   86 (221)
T 4doh_R            8 GLPKPANITFLSINMKNV-LQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVRA   86 (221)
T ss_dssp             ---CCEEEEEEEETTEEE-EEEECCCCSSCCCCEEEEEEEETTSCCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEEE
T ss_pred             CCCCCceeEEEEECCcEE-EEEcCCCCCCCCCeEEEEEEEECCCCCceecccccCCCCCEEeCCCccccCCCCEEEEEEE
Confidence            357899999999888775 99999765456789999999986555553221   2235688898875  56789999999


Q ss_pred             EcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCC--CCcc---------EEEEEEEEEEccCCC
Q psy8771         695 QSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER--SNGH---------IVYYKLQFVETGRSD  763 (904)
Q Consensus       695 ~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~--~~g~---------~~~Y~v~~~~~~~~~  763 (904)
                      ..+.+.+.++....|.........||. +.+. ...++|.|.|.+|....  .+|.         ...|.|.|+..+...
T Consensus        87 ~~g~~~S~w~~~~~F~p~~~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~  164 (221)
T 4doh_R           87 IWGTKCSKWAESGRFYPFLETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNR  164 (221)
T ss_dssp             ESSSCBCCCEECCCBCHHHHCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTE
T ss_pred             EcCCcccCCEecCceechhhCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCc
Confidence            998888877665556544444455665 7777 47789999999985321  1231         358999999876432


Q ss_pred             CccEEEEecCcceEEecCCCCCceEEEEEEEeeC--CCCCCCCCcEEeecCCCC
Q psy8771         764 SEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTS--IGDGPSSYPITIRTHEDD  815 (904)
Q Consensus       764 ~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~--~g~g~~s~~~~~~t~~~~  815 (904)
                      .  ... ......+.|.+|+|++.|.|+|+|...  .|.|.+|..+.+.|..+.
T Consensus       165 ~--~~~-~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d~  215 (221)
T 4doh_R          165 T--WSQ-CVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKDQ  215 (221)
T ss_dssp             E--EEE-EECSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC-
T ss_pred             E--EEE-eecCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCCc
Confidence            2  111 125578999999999999999999975  688999999999997653

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}

Probab=99.42  E-value=1.6e-12  Score=141.20  Aligned_cols=257  Identities=12%  Similarity=0.065  Sum_probs=138.6

Q ss_pred             CcceeeeccceEEEEecC----CCCCcc-eeeEeeCCCCCCCCcEEEeccCCceEEEEeCCCCCC--------Cceec--
Q psy8771           2 DTRCYVESPEEVFIILCP----LPPLIP-GYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPN--------GQITH--   66 (904)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~----~~p~~~-~~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~~~--------g~i~~--   66 (904)
                      .|.|.|.++.........    .+|.+. ..-.+.... ....|.|...+.+.+.|+|.+.....        +.+..  
T Consensus       117 ~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~-~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~  195 (423)
T 3qs7_E          117 EYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKME-NQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEE  195 (423)
T ss_dssp             EEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECS-SSSCEEEEEEESSCCEEEEEEC-------------CEEECC
T ss_pred             EEEEEEEcCCCcEEEEEEEEEecCccccccCCcEeccC-CceEEEEEEeeecCCeEEEEECCCCCccccccccccccccc
Confidence            589999998765443222    223221 111122223 55678999999999999998753211        11111  


Q ss_pred             ccccccccceEEEEeeeccCCeee--eeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCCeEEEeeCC
Q psy8771          67 PPTRAARSHARLAAQSVLRRGRLA--HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMPFVKWRKGQ  143 (904)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~  143 (904)
                      ..++..+.....|...+.. |...  .+.+.+     ..+|.+  .+.+ ..+.+|+.+.|.|.+.| .|.|.|+|+|+ 
T Consensus       196 ~~l~~~d~G~Y~C~A~N~~-G~~~~~~~~l~V-----~~~p~~--~~~~-~~v~~G~~v~L~C~~~g~~p~p~i~W~k~-  265 (423)
T 3qs7_E          196 KVLHELFGTDIRCCARNEL-GRECTRLFTIDL-----NQTPQT--TLPQ-LFLKVGEPLWIRCKAVHVNHGFGLTWELE-  265 (423)
T ss_dssp             SEECCCCSSCEEEEEECSS-CEEEEECEEEES-----SSCCCS--STTE-EEEETTSCEEEEEEEEESSSCCCEEEEES-
T ss_pred             eEEecccCeEEEEEEEcCC-CCcceeeEEEEE-----ecCCcc--CCCc-eEEeCCCeEEEEEEEEcCCCCcEEEEEEC-
Confidence            1122334444455554433 4332  233443     334443  3344 88999999999999999 77899999999 


Q ss_pred             ccccCCCCce----------eecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEe
Q psy8771         144 NIELTPDDKL----------PVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE  211 (904)
Q Consensus       144 ~~~~~~~~~~----------~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~  211 (904)
                      +..+.....+          ....+.|.|.++  +|+|.|+|.|.|.   .+..+.|.|...  +.+..  .|....+..
T Consensus       266 g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~--p~i~~--~~~~~~~~v  338 (423)
T 3qs7_E          266 NKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEK--GFINA--TNSSEDYEI  338 (423)
T ss_dssp             SSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESS--CEEEE--C---CEECC
T ss_pred             CEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeC--CcceE--cCCCccEEe
Confidence            6555443211          233457999999  6999999999997   677788888721  11100  111111111


Q ss_pred             ecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEee--cceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         212 VTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS--GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       212 ~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      .....+.|.+...+.+..  .|.|...+.  ......  ......+....+...+.+.|+|.|.|..|...
T Consensus       339 ~~G~~v~l~C~~~g~P~p--~i~W~k~g~--~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~  405 (423)
T 3qs7_E          339 DQYEEFCFSVRFKAYPQI--RCTWTFSRK--SFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFT  405 (423)
T ss_dssp             CTTCCCCEEEEEEEESCC--EEEEEETTE--EEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEE
T ss_pred             cCCCeEEEEEEEEEcCCC--eEEEEECCE--ECCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEE
Confidence            222344444443322222  344544321  110000  00112222255677899999999999998653

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=99.42  E-value=6.1e-12  Score=120.72  Aligned_cols=183  Identities=10%  Similarity=0.059  Sum_probs=133.9

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEe-----CCccccceE---EecccceEEEeC-CCCCcEEEE
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWND-----TYAKAKHHR---RIGLVETYSLTG-LYPNTLYYI  690 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~-----~~~~~~~~~---~~~~~~~~~l~~-L~p~t~Y~v  690 (904)
                      ..++|+||++...+.. ..|+|.++.. ......|.|+|..     .+...|...   .....+.+.|.+ |..+..|.+
T Consensus         6 ~lp~P~nv~~~s~n~~-~iL~W~p~~~-~~~~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~~   83 (206)
T 4doh_B            6 ILPAPQQLSVLSTNMK-HLLMWSPVIA-PGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNL   83 (206)
T ss_dssp             CCCCCCCCEEEEETTE-EEEECCCCCC-SSSCCEEEEEEEEHHHHHHSTTCCEEEEEEEEESSSEEECTTTCCSSSCEEE
T ss_pred             cCCCCCeeEEEEeCCE-EEEEECCCCC-CCCCEEEEEEEEEeccccCCCccceecccccCCCCCEEcCCccccCCCCEEE
Confidence            3578999999998887 7999999853 3345789999994     344445332   223456888884 777889999


Q ss_pred             EEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE
Q psy8771         691 WLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT  770 (904)
Q Consensus       691 ~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~  770 (904)
                      +|+|.+..+.+.++....+......-..||. +.+. ....+|.|.|.+|      +.+..|.|.|+..+.... .....
T Consensus        84 RVrA~~~~~~S~w~~~~~f~~~~~t~i~PP~-v~v~-~~~~~i~V~~~~p------~~~l~Y~v~y~~~~~~~~-~~~~~  154 (206)
T 4doh_B           84 RVRATLGSQTSAWSILKHPFNRQSTILTRPG-MEIT-KDGFHLVIELEDL------GPQFEFLVAYWRREPGAE-EHVKM  154 (206)
T ss_dssp             EEEEEETTEECCCEECSSCBCGGGCBCCCCC-EEEE-EETTEEEEEECCC------CTTCEEEEEEEESSSSCC-CEEEE
T ss_pred             EEEEEcCCCccCccccccccchhhcccCCCe-EEEE-eCCCEEEEEecCC------CCcEEEEEEEEEcCCCce-eEEeE
Confidence            9999998888877655555444333333444 7776 4788999999977      347799999998865433 12223


Q ss_pred             ec-CcceEEecCCCCCceEEEEEEEeeC--CCCCCCCCcEEeecCC
Q psy8771         771 LK-NQTSFVLDELKKWTEYRIWVLAGTS--IGDGPSSYPITIRTHE  813 (904)
Q Consensus       771 ~~-~~~~~~i~~L~p~t~Y~~~V~a~~~--~g~g~~s~~~~~~t~~  813 (904)
                      +. ....+.|.+|+|++.|.|+|+|...  .|.|.+|.+..+.|..
T Consensus       155 ~~~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C~~t~~  200 (206)
T 4doh_B          155 VRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQG  200 (206)
T ss_dssp             ECCSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEEECC--
T ss_pred             EccCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEeEEccc
Confidence            33 4678999999999999999999986  3788999999998854

>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*

Probab=99.42  E-value=3.1e-12  Score=138.60  Aligned_cols=249  Identities=14%  Similarity=0.205  Sum_probs=150.7

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC--ceeecceEEEEeee--cC------CeEEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD--KLPVGRNVLTLDRV--TE------SENYTC  173 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--~~~~~~~~l~i~~l--~d------~g~Y~c  173 (904)
                      +|.|...|.+.+.+.+|+.++|.|.+.|.|.|.|+|+|++|..+....  +....+++|.|.++  +|      +|.|+|
T Consensus         3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C   82 (388)
T 2v5m_A            3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYAC   82 (388)
T ss_dssp             EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEE
T ss_pred             CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEE
Confidence            688988888767789999999999999999999999994376665432  33347789999998  45      999999


Q ss_pred             EEEecCcce-EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccc-eEEEEEEEeCCCCC---------
Q psy8771         174 IAASVLGVI-ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETL-LYYVIQYKPKAANT---------  242 (904)
Q Consensus       174 ~a~n~~g~~-~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~-~~y~v~~~~~~~~~---------  242 (904)
                      .|.|..|.. +..+.|.+.  ..+...  ..+....+  .....++|.+...+.+. ....+.|...+...         
T Consensus        83 ~a~n~~g~~~s~~~~v~v~--~~p~~~--~~~~~~~v--~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~  156 (388)
T 2v5m_A           83 LARNQFGSIISRDVHVRAV--VAQYYE--ADVNKEHV--IRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDG  156 (388)
T ss_dssp             EEEETTEEEECCCEEEEEE--CCCCCC--CBCCCEEE--ETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTT
T ss_pred             EEEccCCeEEecceEEEEc--cccccc--cCccceee--ecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCC
Confidence            999999874 345555555  222111  22333333  34457788887663321 22455665543211         


Q ss_pred             CeEEeecceeceEEEcCCCCCCe-EEEEEEEEcCCCCCC-CC---CCeEEecCCC-----CCCCCCCceEecccCCCeeE
Q psy8771         243 PYSEISGIITTYYTVRNLSPYTE-YEFYIIAVNNLGRGP-PS---SPAVITTGET-----EPGTAPRDVQVRPLSSSTMV  312 (904)
Q Consensus       243 ~~~~~~~~~~~~~~i~~L~p~~~-Y~~~v~a~n~~g~s~-~s---~~~~~~t~~~-----~p~~~p~~l~~~~~~~~~v~  312 (904)
                      ... +  .....+.|.+++..+. +.|+|.|.|..+... .+   ..+.+.....     .+........+.  ....+.
T Consensus       157 ~~~-~--~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~--~G~~v~  231 (388)
T 2v5m_A          157 KYL-V--LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELM--VAHTIS  231 (388)
T ss_dssp             TEE-E--CTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEE--TTSCEE
T ss_pred             cEE-E--ccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEe--eCCcEE
Confidence            111 1  1235799999999999 999999999764321 11   1222221100     000011111221  134555


Q ss_pred             EEecCCCCCCceeeEEEEE--------------eeceeEEEEEcCCCCCcEEEEEEEEEcCCCCC
Q psy8771         313 IQWDEPETPNGQITAKHHR--------------RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG  363 (904)
Q Consensus       313 l~W~~p~~~~~~~~~~~~~--------------~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~  363 (904)
                      |.+.....+...+.++...              .......+.|..+.......+++.+.|..|..
T Consensus       232 l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~  296 (388)
T 2v5m_A          232 LLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGE  296 (388)
T ss_dssp             ECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred             EEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCce
Confidence            5555433333334444320              00112367888888888888899999887753

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4

Probab=99.41  E-value=1.1e-12  Score=142.56  Aligned_cols=161  Identities=12%  Similarity=0.168  Sum_probs=106.7

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC--Cceee----cceEEEEeee--cCCeEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD--DKLPV----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~~----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      .+|.+.  +.. ..+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+...  .++..    ....|.|.++  +|+|.|+|.
T Consensus       213 ~~p~~~--~~~-~~~~~G~~v~l~C~~~g~p~~~i~W~~~-g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~  288 (395)
T 1bih_A          213 PVPQYV--SKD-MMAKAGDVTMIYCMYGSNPMGYPNYFKN-GKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCE  288 (395)
T ss_dssp             CEEEEE--CCS-EEEETTSCEEEEEEEECSSCCCCEEEET-TEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEE
T ss_pred             cCceec--CCc-eEEECCCcEEEEEEeccCCCCeEEEEEC-CEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEE
Confidence            355552  445 8899999999999999999999999999 6666443  33332    2337999999  699999999


Q ss_pred             EEecCcceEE-EEEEEEEeecCCCCCCCCCCcc-eEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC---CCeEEeec
Q psy8771         175 AASVLGVIET-STIVKVQCKYAPLLTLPVAPLD-VKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN---TPYSEISG  249 (904)
Q Consensus       175 a~n~~g~~~~-~~~l~v~~~~~~~~~~P~~p~~-l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~---~~~~~~~~  249 (904)
                      |.|..|.... .+.|.|....  .+.  ..|.. ..+  .....++|.+...+.+...  +.|...+..   ..+. .  
T Consensus       289 a~n~~g~~~~~~~~l~V~~~P--~~~--~~~~~~~~~--~~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~~~~~-~--  357 (395)
T 1bih_A          289 VDNGVGKPQKHSLKLTVVSAP--KYE--QKPEKVIVV--KQGQDVTIPCKVTGLPAPN--VVWSHNAKPLSGGRAT-V--  357 (395)
T ss_dssp             ECCSSSSCEEEEEEEEEEEEE--EEE--ECCCSEEEE--CTTSCEEEECEEEEESCCC--CEEEETTEECCSSSEE-E--
T ss_pred             EEeCCCCceEEEEEEEEEcCC--ccc--cCCCcceEe--cCCCeEEEEEEECcccCCe--eEEEECCEECCCCceE-E--
Confidence            9999998655 8888887321  111  12223 222  2234455555543222111  334333211   1111 1  


Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                       ....+.|.++...+.+.|+|.|.|..|..
T Consensus       358 -~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~  386 (395)
T 1bih_A          358 -TDSGLVIKGVKNGDKGYYGCRATNEHGDK  386 (395)
T ss_dssp             -ETTEEEESSCCSTTCEEEEEEEEETTEEE
T ss_pred             -ECCEEEEeeCCcccCEEEEEEEEccCCCc
Confidence             12479999999999999999999998864

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1

Probab=99.41  E-value=1.3e-12  Score=110.64  Aligned_cols=98  Identities=24%  Similarity=0.309  Sum_probs=81.1

Q ss_pred             cCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCcc-EEEEEEEEEEccCCCCccEEEEec---CcceEEecCCCCCce
Q psy8771         712 KQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH-IVYYKLQFVETGRSDSEASIVTLK---NQTSFVLDELKKWTE  787 (904)
Q Consensus       712 ~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~-~~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t~  787 (904)
                      .+++|.. |.++.+...+.+ +.|+|++|  ...||. +.+|.|+|+..+...+......+.   ..+.++|.+|+|++.
T Consensus         3 ~~~~P~~-P~~~~~~~~~~~-v~l~W~~P--~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~   78 (105)
T 2haz_A            3 HMDTPSS-PSIDQVEPYSST-AQVQFDEP--EATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETT   78 (105)
T ss_dssp             CCCCCCC-CEEEEEEECSSC-EEEEEECC--SCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCE
T ss_pred             CCCCCcC-CCCCEEEEcCCc-EEEEEcCC--cccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCE
Confidence            4556775 899999888887 99999999  467787 999999999987654433323333   568999999999999


Q ss_pred             EEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         788 YRIWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       788 Y~~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      |.|+|+|.|..|.|++|+.+.++|.+
T Consensus        79 Y~~rV~A~n~~G~g~~S~~~~~~T~p  104 (105)
T 2haz_A           79 YAVRLAALNGKGLGEISAASEFKTQP  104 (105)
T ss_dssp             EEEEEEEEETTEECCCCCCEEEECCC
T ss_pred             EEEEEEEEcCCccCCCcCCEeeEEec
Confidence            99999999999999999999999964

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}

Probab=99.41  E-value=1.9e-12  Score=136.48  Aligned_cols=230  Identities=16%  Similarity=0.165  Sum_probs=140.5

Q ss_pred             CCCCCcEEEecc---------CCceEEEEeCCCCC---------CCceecccccccccc-eEEEEeeeccCCeeeeeeee
Q psy8771          35 TAPRDVQVRPLS---------SSTMVIQWDEPETP---------NGQITHPPTRAARSH-ARLAAQSVLRRGRLAHAVRQ   95 (904)
Q Consensus        35 ~~p~~l~~~~~~---------~~s~~v~W~~~~~~---------~g~i~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~   95 (904)
                      +.+..|.|...+         .+.+.|.|.+....         ++.+........|.. ...|...+..+.......+.
T Consensus        44 G~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~  123 (329)
T 3oq3_B           44 GEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRS  123 (329)
T ss_dssp             TSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEE
T ss_pred             CCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEE
Confidence            355555555444         35689999876532         344555555555666 56666555443322222222


Q ss_pred             ccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccC-CCCceeecceEEEEeee--cCCeEE
Q psy8771          96 VADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELT-PDDKLPVGRNVLTLDRV--TESENY  171 (904)
Q Consensus        96 v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~-~~~~~~~~~~~l~i~~l--~d~g~Y  171 (904)
                      +    ...||.+...+.. ..+.+|+.+.|.|.+.|.| .|.|+|+|+ +..+. ...++...++.|.|.++  +|+|.|
T Consensus       124 v----~~~~p~~~~~~~~-~~~~~G~~v~L~C~~~g~p~~~~i~W~k~-~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y  197 (329)
T 3oq3_B          124 H----IRKPPSCIPETYE-LGTHDKYGIDLYCGILYAKHYNNITWYKN-NQELIIDGTKYSQSGQNLIIHNPELEDSGRY  197 (329)
T ss_dssp             E----ECCCCSCEEEEEE-TTSSTTTCEEEECCCCSCCCCCEEEEEET-TEECCCSSSSEEEETTEEEECSCCGGGCEEE
T ss_pred             E----EcCCCcEeccccc-eEEeCCCcEEEEeccCCCCCCceEEEEEC-CccCCCCCceEecCCCEEEEeecChhhCEEE
Confidence            2    2345555444433 5567899999999999999 999999999 55554 45566666789999999  699999


Q ss_pred             EEEEEec--CcceEEE----EEEEEEeecCCCCCCCC------CCcceEEEeecCCeEEEEEeCCCcc--ceEEEEEEEe
Q psy8771         172 TCIAASV--LGVIETS----TIVKVQCKYAPLLTLPV------APLDVKISEVTATSVRLDWTYPSET--LLYYVIQYKP  237 (904)
Q Consensus       172 ~c~a~n~--~g~~~~~----~~l~v~~~~~~~~~~P~------~p~~l~~~~~~~~sv~l~W~~~~~~--~~~y~v~~~~  237 (904)
                      +|.|.|.  .|.....    +.|.|.       ..|.      .|....+.  ....++|.+...+.+  .....+.|..
T Consensus       198 ~C~a~n~~~~g~~~~~~s~~~~l~V~-------~~~~~~~~~~~~~~~~v~--~G~~~~l~C~~~g~p~~~~~i~v~W~~  268 (329)
T 3oq3_B          198 DCYVHYDDVRIKNDIVVSRCKILTVI-------PSQDHRFKLILDPKINVT--IGEPANITCTAVSTSLLVDDVLIDWEN  268 (329)
T ss_dssp             EEEEEECCTTSSSCEEEEEEEEEEEE-------CCCCCCEEEECCSEEEEC--TTSCEEEEEEEEETTCCTTCCEEEEEC
T ss_pred             EEEEEecccCCCceeEEEeeEEEEEE-------CCCCCCCceecCCeeEEe--cCCCEEEEEEEEECCCCCCCcEEEEEE
Confidence            9999997  6654333    667776       2221      22233332  233455555443222  1111345554


Q ss_pred             CCCC-----CCeEEe----ecceeceEEEcCCCCCCeE-EEEEEEEcCCCCC
Q psy8771         238 KAAN-----TPYSEI----SGIITTYYTVRNLSPYTEY-EFYIIAVNNLGRG  279 (904)
Q Consensus       238 ~~~~-----~~~~~~----~~~~~~~~~i~~L~p~~~Y-~~~v~a~n~~g~s  279 (904)
                      .+..     ......    .......+.|.++...+.+ .|+|.|.|..|..
T Consensus       269 ~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~  320 (329)
T 3oq3_B          269 PSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDK  320 (329)
T ss_dssp             TTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEE
T ss_pred             CCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCce
Confidence            3221     100000    0013577999999999999 9999999998864

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.41  E-value=1.5e-12  Score=112.03  Aligned_cols=104  Identities=28%  Similarity=0.351  Sum_probs=86.9

Q ss_pred             eeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCC
Q psy8771         707 IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKW  785 (904)
Q Consensus       707 ~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~  785 (904)
                      +.++|.+.+|. +|.++++...+.+++.|+|++|  ...+|.+.+|.|+|+..+.....  ...+. ..+.+.|.+|.|+
T Consensus         2 v~~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~   76 (111)
T 1x5l_A            2 SSGSSGQAAPS-QVVVIRQERAGQTSVSLLWQEP--EQPNGIILEYEIKYYEKDKEMQS--YSTLKAVTTRATVSGLKPG   76 (111)
T ss_dssp             CCCCCSCCCCC-CCCCEECSCBCSSCEEEEECCC--SCCCSCCCEEEEEEEESSSCCSS--CEEEEESSSEEEECSCCTT
T ss_pred             ceEEcCCCCCC-CCceEEEEEcCCCEEEEEECCC--CCCCCEEEEEEEEEEECCCCcee--EEEecCCCCEEEEcCCCCC
Confidence            34678888787 5789999889999999999999  45688999999999987643322  23334 7889999999999


Q ss_pred             ceEEEEEEEeeCCCCCCCCCcEEeecCCCC
Q psy8771         786 TEYRIWVLAGTSIGDGPSSYPITIRTHEDD  815 (904)
Q Consensus       786 t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~  815 (904)
                      +.|.|+|+|.|..|.|++|..+.++|.+.+
T Consensus        77 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~  106 (111)
T 1x5l_A           77 TRYVFQVRARTSAGCGRFSQAMEVETGKPS  106 (111)
T ss_dssp             CEEEECEEEEETTEECCCCCCEEEECCCTT
T ss_pred             CEEEEEEEEEeCCcCCCCcccEEEEcCCCC
Confidence            999999999999999999999999997654

>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A

Probab=99.41  E-value=1e-12  Score=108.65  Aligned_cols=87  Identities=22%  Similarity=0.327  Sum_probs=73.3

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCc--cccCCCCceee--cceEEEEeee--cCCeEEEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN--IELTPDDKLPV--GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~--~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      .||.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +  ..+....++..  ....|.|.++  +|+|.|+|.|.
T Consensus         1 ~~P~i~~~~~~-~~v~~G~~~~l~C~~~g~P~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~   78 (93)
T 1wit_A            1 LKPKILTASRK-IKIKAGFTHNLEVDFIGAPDPTATWTVG-DSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVK   78 (93)
T ss_dssp             CCCEECCCCCE-EEECTTBCCEEEEEEECCSSCEEEEECS-TTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred             CCCeEEcCCCc-eEEeCCCEEEEEEEEEEcCCCEEEEEEC-CCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEE
Confidence            37888877776 9999999999999999999999999999 5  66665544433  3467999998  69999999999


Q ss_pred             ecCcceEEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKVQ  191 (904)
Q Consensus       177 n~~g~~~~~~~l~v~  191 (904)
                      |..|..+..+.|.|+
T Consensus        79 N~~G~~~~~~~l~V~   93 (93)
T 1wit_A           79 NELGEDEAIFEVIVQ   93 (93)
T ss_dssp             ETTEEEEEEEEEEEC
T ss_pred             cCCCeEEEEEEEEEC
Confidence            999998888888763

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=99.41  E-value=5.3e-12  Score=122.56  Aligned_cols=193  Identities=18%  Similarity=0.208  Sum_probs=133.6

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee---cCceEEEEcCCC--CCCeEEEEEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV---DNNQLTTISDLT--PHTIYTIRVQ  557 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~--p~t~Y~~~V~  557 (904)
                      .+|.|+++...+-.. .|+|+++...++....|.|+|...+.   ..|.....   ...+.+.|+++.  +...|.++|+
T Consensus        10 p~P~nv~~~s~n~~~-iL~W~p~~~~~~~~~~Y~Vqy~~~~~---~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~   85 (221)
T 4doh_R           10 PKPANITFLSINMKN-VLQWTPPEGLQGVKVTYTVQYFIYGQ---KKWLNKSECRNINRTYCDLSAETSDYEHQYYARVR   85 (221)
T ss_dssp             -CCEEEEEEEETTEE-EEEEECCCCSSCCCCEEEEEEEETTS---CCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEE
T ss_pred             CCCceeEEEEECCcE-EEEEcCCCCCCCCCeEEEEEEEECCC---CCceecccccCCCCCEEeCCCccccCCCCEEEEEE
Confidence            468999999988655 59999976544667899999997542   45755432   456778999875  5678999999


Q ss_pred             EEeCCCCCCCCCcEEEecC-CCCCCCCCCceEEecCCCeEEEEEeCCCCC----CCCceEEEEEeccCCCCCcceEEEee
Q psy8771         558 AFTSVGPGPLSAPVLVKTQ-QGVPSQPRDLRAVDIQETAVTLAWSKPTHS----GENIISYELYWNDTYAKPRDLRAVDI  632 (904)
Q Consensus       558 a~~~~g~~~~S~~~~~~t~-~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~----~~~~~~y~v~~~~~~~~p~~l~~~~~  632 (904)
                      |..+.+.+.|+....|... .....+|. +.+.. ..++|.|.|.+|...    ++..                      
T Consensus        86 A~~g~~~S~w~~~~~F~p~~~t~igPP~-v~v~~-~~~~l~V~~~~P~~~~~~~~~~~----------------------  141 (221)
T 4doh_R           86 AIWGTKCSKWAESGRFYPFLETQIGPPE-VALTT-DEKSISVVLTAPEKWKRNPEDLP----------------------  141 (221)
T ss_dssp             EESSSCBCCCEECCCBCHHHHCBCCCCE-EEEEC-CSSCEEEEEECCBCCCSSTTSCC----------------------
T ss_pred             EEcCCcccCCEecCceechhhCccCCCE-EEEEE-CCCEEEEEEeCCCcccccCCCCc----------------------
Confidence            9998887777655444432 22334454 88774 678999999988531    0000                      


Q ss_pred             ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcC--CCCCCCCCCeeEE
Q psy8771         633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP--RGEGATTPPIPVR  710 (904)
Q Consensus       633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~--~G~~~~s~~~~~~  710 (904)
                            ++|.    .-.....|.|.|+..+....... ......+.|.+|+|++.|.|+|+|...  .|.|.+|..+.+.
T Consensus       142 ------~s~~----~i~~~l~Y~V~y~~~~~~~~~~~-~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~  210 (221)
T 4doh_R          142 ------VSMQ----QIYSNLKYNVSVLNTKSNRTWSQ-CVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCAR  210 (221)
T ss_dssp             ------CBHH----HHSTTCEEEEEEEETTTTEEEEE-EECSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEE
T ss_pred             ------eEHH----HhcCceEEEEEEEECCCCcEEEE-eecCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEe
Confidence                  0000    00013589999998765544222 233468899999999999999999975  6888899888888


Q ss_pred             ecCC
Q psy8771         711 TKQY  714 (904)
Q Consensus       711 t~~~  714 (904)
                      |..+
T Consensus       211 T~~d  214 (221)
T 4doh_R          211 TLKD  214 (221)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            8654

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.41  E-value=1.2e-12  Score=114.08  Aligned_cols=104  Identities=26%  Similarity=0.476  Sum_probs=86.9

Q ss_pred             CCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771         563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS  642 (904)
Q Consensus       563 g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~  642 (904)
                      |.|++|..+.+.|....|.+|.++++..++.+++.|+|.++..                                     
T Consensus         1 G~g~~S~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~-------------------------------------   43 (119)
T 1wfn_A            1 GSSGSSGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGE-------------------------------------   43 (119)
T ss_dssp             CCCCCSCCCSCCSSCCSCCCCSCCEEESCCSSEEEEECCCCTT-------------------------------------
T ss_pred             CCCCCCCCEEEECCCCCCCCCCceEEEECCCCEEEEEEcCCCC-------------------------------------
Confidence            5678899999999999999999999999999999999999865                                     


Q ss_pred             CCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCe
Q psy8771         643 KPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI  707 (904)
Q Consensus       643 ~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~  707 (904)
                          .++.+.+|.|+|+..+....  ..........+.|.+|+|++.|.|+|+|+|..|.|.+|..+
T Consensus        44 ----~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~  106 (119)
T 1wfn_A           44 ----KNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAST  106 (119)
T ss_dssp             ----CCSCCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred             ----CCCcEEEEEEEEEECCCCCceEEEEeCCCceEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence                56678888888887764432  23334567799999999999999999999999999888655

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.41  E-value=1.8e-12  Score=113.24  Aligned_cols=110  Identities=21%  Similarity=0.351  Sum_probs=88.6

Q ss_pred             CCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCC-CCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCC
Q psy8771         566 PLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPT-HSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKP  644 (904)
Q Consensus       566 ~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~-~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~  644 (904)
                      ..+....+.|....|.+|.++++...+.+++.|+|.++. +                                       
T Consensus         4 gss~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~---------------------------------------   44 (120)
T 1x5f_A            4 GSSGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASD---------------------------------------   44 (120)
T ss_dssp             CCCSSCCCCCCCCCCCCCEEEEEEEECSSCEEEEEECCSSC---------------------------------------
T ss_pred             CCCCCEEecCCCCCCCCCCCcEEEecCCCEEEEEECCCCCC---------------------------------------
Confidence            345556677888888999999999999999999999986 4                                       


Q ss_pred             CCCCCceeeEEEEEEeCCccccceEE--ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCC
Q psy8771         645 THSGENIISYELYWNDTYAKAKHHRR--IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVP  716 (904)
Q Consensus       645 ~~~~~~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p  716 (904)
                        .++.+.+|.|+|+..+...+....  ......+.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|....|
T Consensus        45 --~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p  116 (120)
T 1x5f_A           45 --PHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG  116 (120)
T ss_dssp             --SSCCSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred             --CCCcEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCC
Confidence              456788888888887544443222  2346799999999999999999999999999999999999976544

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.40  E-value=1.5e-12  Score=114.06  Aligned_cols=114  Identities=18%  Similarity=0.265  Sum_probs=87.7

Q ss_pred             CCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe----ecCceEEEE
Q psy8771         468 TTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV----VDNNQLTTI  543 (904)
Q Consensus       468 ~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~~~~  543 (904)
                      .+..+...+... +|.+|.++.+..++.+++.|+|.++.+.++.+.+|.|+|+.........|....    ....+.+.+
T Consensus         5 ~s~~~~~~~~~~-~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v   83 (124)
T 1wis_A            5 SSGTISSGVPPE-LPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEV   83 (124)
T ss_dssp             CSCCCCSCCCCC-CCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEE
T ss_pred             ccccccccCCCC-CCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEe
Confidence            333444444443 448999999999999999999999887777899999999984212235575543    256778999


Q ss_pred             cCCCCCCeEEEEEEEEeCCCCCCCCCcE-EEecCCCCCCC
Q psy8771         544 SDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQGVPSQ  582 (904)
Q Consensus       544 ~~L~p~t~Y~~~V~a~~~~g~~~~S~~~-~~~t~~~~p~~  582 (904)
                      .+|.|++.|.|+|+|+|..|.|.+|... .++|....|..
T Consensus        84 ~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~P~~  123 (124)
T 1wis_A           84 PDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPSS  123 (124)
T ss_dssp             CSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSSCCC
T ss_pred             CCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCCCCC
Confidence            9999999999999999999999998864 57777666653

>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}

Probab=99.40  E-value=2.7e-11  Score=125.24  Aligned_cols=247  Identities=12%  Similarity=0.153  Sum_probs=152.4

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      .+|.|...+.+ +.+.+|+.+.|.|.+.|.|. .|.|+|+++..+....++...    ...|.|.++  +|+|.|+|.|.
T Consensus         3 ~~p~v~~~~~~-~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~   80 (291)
T 2wim_A            3 ALLQVTISLSK-VELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQAT   80 (291)
T ss_dssp             CCCEEEESCSE-EEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred             CCceEEEeccc-eEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEe
Confidence            47888888888 99999999999999999985 899999447777666666542    348999998  69999999999


Q ss_pred             ecCcce-EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC------CCeEEeec
Q psy8771         177 SVLGVI-ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN------TPYSEISG  249 (904)
Q Consensus       177 n~~g~~-~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~------~~~~~~~~  249 (904)
                      |..|.. .....|.|..  .+  .....+....+.  ....+.|.+...+.+...  +.|...+..      ..+..   
T Consensus        81 n~~g~~~~~~~~l~v~~--~~--~~~~~~~~~~v~--~G~~v~l~C~~~~~p~~~--v~W~~~~~~~~~~~~~~~~~---  149 (291)
T 2wim_A           81 DAKGQTQEATVVLEIYQ--KL--TFREVVSPQEFK--QGEDAEVVCRVSSSPAPA--VSWLYHNEEVTTISDNRFAM---  149 (291)
T ss_dssp             CSSSCEEEEEEEEEEEC--CC--BCCSCCCSEEEE--TTSCEEECCCCBCSSCCE--EEEECC----CBCCCSSEEE---
T ss_pred             cccCceEEEEEEEEecC--Cc--ceEeCCCChhhc--CCCCEEEEEEEccCCCCE--EEEEECCccccccCCceEEE---
Confidence            998875 3555666651  11  112233343332  344566666554333222  444332211      11111   


Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecC-CCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEE
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTG-ETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAK  328 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~-~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~  328 (904)
                      .....+.|.++...+.+.|+|.|.|..+.........+... +.....++............+.|.+.....+...+.++
T Consensus       150 ~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~  229 (291)
T 2wim_A          150 LANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWF  229 (291)
T ss_dssp             CTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEE
T ss_pred             ccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEE
Confidence            12356999999999999999999998754321121222111 11111111111223334556777777655444455554


Q ss_pred             EEEe----------eceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         329 HHRR----------IGLVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       329 ~~~~----------~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                      ....          ......+.|..+.....-.+++.|.|..|.
T Consensus       230 ~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~  273 (291)
T 2wim_A          230 RNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGE  273 (291)
T ss_dssp             ETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEE
T ss_pred             ECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCc
Confidence            3211          112346888888888888889999988775

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=5.1e-12  Score=110.23  Aligned_cols=107  Identities=26%  Similarity=0.429  Sum_probs=86.5

Q ss_pred             CCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe--ecCceEEEEcCCC
Q psy8771         470 PPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV--VDNNQLTTISDLT  547 (904)
Q Consensus       470 ~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~  547 (904)
                      ....+.+.... |.+|.++.+...+.+++.|+|++|.+.++.+.+|.|+|+.....   .|....  ....+.+.+.+|.
T Consensus         7 ~~~~~~~~~~~-P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~   82 (119)
T 2ed7_A            7 GKPAIPSSSVL-PSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDN---RERALNTTQPGSLQLTVGNLK   82 (119)
T ss_dssp             CCSSCCCSSSS-CCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCC---CCEEEECCCTTCCEEEECSCC
T ss_pred             CCccCCCCCCC-CcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCC---cceeeEeecCCceEEEeCCCC
Confidence            33444455444 48999999999999999999999987788999999999987643   222222  2557889999999


Q ss_pred             CCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCC
Q psy8771         548 PHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP  580 (904)
Q Consensus       548 p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p  580 (904)
                      |++.|.|+|+|+|..|.|.+|..+.+.|....|
T Consensus        83 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p  115 (119)
T 2ed7_A           83 PEAMYTFRVVAYNEWGPGESSQPIKVATQPESG  115 (119)
T ss_dssp             SSSEEEECCEEEESSCBCSCCCCEEEECCCCSC
T ss_pred             CCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence            999999999999999999999999999876554

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.40  E-value=1.3e-12  Score=111.05  Aligned_cols=99  Identities=35%  Similarity=0.532  Sum_probs=84.4

Q ss_pred             cCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEE
Q psy8771         712 KQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRI  790 (904)
Q Consensus       712 ~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~  790 (904)
                      .+.+|. +|.++++...+.+++.|+|++|.  ..+|.+.+|.|+|+..+...+    ..+. ..+.+.|.+|+|++.|.|
T Consensus         4 ~~~~P~-~P~~l~~~~~~~~si~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~----~~~~~~~~~~~i~~L~p~t~Y~~   76 (106)
T 2ed8_A            4 GSSGPG-PVENLQAVSTSPTSILITWEPPA--YANGPVQGYRLFCTEVSTGKE----QNIEVDGLSYKLEGLKKFTEYSL   76 (106)
T ss_dssp             CCCCCC-CCEEEEEECSSTTEEEEEEECCS--SCSSCCCEEEEEEEETTTCCE----EEEEECSSCEEEESCCTTCEEEE
T ss_pred             CCCCCc-CCceeEEEecCCCEEEEEECCCC--CCCCCeeEEEEEEEECCCCce----EEEeCCccEEEECCCCCCCEEEE
Confidence            445666 68999999999999999999994  567899999999998765432    2223 678999999999999999


Q ss_pred             EEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771         791 WVLAGTSIGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       791 ~V~a~~~~g~g~~s~~~~~~t~~~~P~  817 (904)
                      +|+|.|..|.|++|..+.++|.++.|.
T Consensus        77 ~V~A~n~~G~g~~S~~~~~~T~~~~P~  103 (106)
T 2ed8_A           77 RFLAYNRYGPGVSTDDITVVTLSDSGP  103 (106)
T ss_dssp             EEEEECSSCEEEECCCEEEECCCCCCC
T ss_pred             EEEEEeCCccCCCcCCEEEEcCCCCCC
Confidence            999999999999999999999888764

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}

Probab=99.40  E-value=8.4e-12  Score=129.95  Aligned_cols=235  Identities=15%  Similarity=0.266  Sum_probs=137.2

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC------------CC---ceecccccc-cccceEEEEeeeccCCeeeeeeeeccCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP------------NG---QITHPPTRA-ARSHARLAAQSVLRRGRLAHAVRQVADP   99 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~------------~g---~i~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~v~~~   99 (904)
                      ....|.|...+.+.+.|.|.+....            +|   .+....... .+.....|...+..+.....+.+.|...
T Consensus        22 ~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~  101 (304)
T 2yd9_A           22 GVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLRE  101 (304)
T ss_dssp             SCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECG
T ss_pred             CeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEecc
Confidence            5677777777778889999775321            22   133333333 4444555555443333334445555432


Q ss_pred             C--CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC---Cce-eecceEEEEeee--cCCeEE
Q psy8771         100 V--RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD---DKL-PVGRNVLTLDRV--TESENY  171 (904)
Q Consensus       100 ~--~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~---~~~-~~~~~~l~i~~l--~d~g~Y  171 (904)
                      .  ....|.|...|.. ..+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+...   .++ ...++.|.|.++  +|+|.|
T Consensus       102 ~~~p~~~p~i~~~~~~-~~v~~g~~v~l~C~~~g~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y  179 (304)
T 2yd9_A          102 DQLPSGFPNIDMGPQL-KVVERTRTATMLCAASGNPDPEITWFKD-FLPVDPSASNGRIKQLRSGALQIESSEETDQGKY  179 (304)
T ss_dssp             GGCCTTCCEEEECCCC-EEEETTSCEEECCEEECSSCCEEEEEET-TEECCGGGGTTSEEECTTSCEEECSCCGGGCEEE
T ss_pred             ccCCCCCCeeecCCcc-EEEeCCCeEEEEEECccCCCCeEEEEEC-CEECcCCCCcceEEeCCCeEEEEccCCcccCEEE
Confidence            1  1233888888877 8999999999999999999999999999 6555432   233 346679999999  699999


Q ss_pred             EEEEEecCcceEEE-EEEEEEee-cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeec
Q psy8771         172 TCIAASVLGVIETS-TIVKVQCK-YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISG  249 (904)
Q Consensus       172 ~c~a~n~~g~~~~~-~~l~v~~~-~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~  249 (904)
                      +|.|.|..|..... +.|.|... ..|.+..  .|.+..+  .....++|.+...+.+...  +.|...+..........
T Consensus       180 ~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~--~~~~~~v--~~G~~v~l~C~~~g~p~p~--v~W~~~~~~l~~~~~~~  253 (304)
T 2yd9_A          180 ECVATNSAGVRYSSPANLYVRVQNVAPRFSI--LPMSHEI--MPGGNVNITCVAVGSPMPY--VKWMQGAEDLTPEDDMP  253 (304)
T ss_dssp             EEEEEETTEEEECCCEEEEEECCCEEEEEEE--CCCCBCC--CTTCCEEEEEEEEEESCCE--EEEEETTEECSCSSSCC
T ss_pred             EEEEEeCCCCEEeccEEEEEEeeccCCcEEe--cCCceEE--cCCCeEEEEEEEeeeCCCE--EEEEECCEECCCccccc
Confidence            99999999876543 56666511 0111110  1122111  2233455555543222222  34443321100000011


Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      .....+.+.+++  +.+.|+|.|.|..|...
T Consensus       254 ~~~~~L~i~~~~--d~G~Y~C~a~N~~G~~~  282 (304)
T 2yd9_A          254 VGRNVLELTDVK--DSANYTCVAMSSLGVIE  282 (304)
T ss_dssp             BSEEEEEECSCC--SCEEEEEEEEETTEEEE
T ss_pred             CCcEEEEEcccc--cCEEEEEEEEeCCCcEE
Confidence            223457777764  78999999999988653

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A

Probab=99.40  E-value=9.5e-12  Score=121.66  Aligned_cols=169  Identities=17%  Similarity=0.320  Sum_probs=115.6

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-CCCceee---cc--eEEEEeee---cCCeEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-PDDKLPV---GR--NVLTLDRV---TESENYT  172 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-~~~~~~~---~~--~~l~i~~l---~d~g~Y~  172 (904)
                      ..||.|...|.+ +.+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+. ...++.+   .+  ..|.|.++   +|+|.|+
T Consensus         4 ~~pP~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~   81 (212)
T 2yd1_A            4 AHPPEIIRKPQN-QGVRVGGVASFYCAARGDPPPSIVWRKN-GKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYE   81 (212)
T ss_dssp             -CCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEET-TEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEE
T ss_pred             CCCCEEEcCCCc-eEEecCCEEEEEEEEccCCCCeEEEEEC-CEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEE
Confidence            578999999998 9999999999999999999999999999 66664 4455543   22  58999988   5899999


Q ss_pred             EEEEecCcc-eEEEEEEEEEeecCCCCCCC---CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC-----CC
Q psy8771         173 CIAASVLGV-IETSTIVKVQCKYAPLLTLP---VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN-----TP  243 (904)
Q Consensus       173 c~a~n~~g~-~~~~~~l~v~~~~~~~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~-----~~  243 (904)
                      |.|.|..|. ....+.|.|..........|   ..|....+  .....++|.+...+.+...  +.|...+..     ..
T Consensus        82 C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~--~~g~~v~l~C~~~g~p~p~--i~W~~~~~~~~~~~~~  157 (212)
T 2yd1_A           82 CVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVI--EVGHTVLMTCKAIGNPTPN--IYWIKNQTKVDMSNPR  157 (212)
T ss_dssp             EEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEE--ETTCCEEECCEEECSSCCE--EEEEETTEECCTTSTT
T ss_pred             EEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEe--ecCCeEEEEEEeccCCCCe--EEEEECCeEcccCCCe
Confidence            999999998 77888888872111000001   01222222  2234556655543333222  444433211     11


Q ss_pred             eEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         244 YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       244 ~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      + .   .....+.|.++...+.+.|+|.|.|..|...
T Consensus       158 ~-~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~  190 (212)
T 2yd1_A          158 Y-S---LKDGFLQIENSREEDQGKYECVAENSMGTEH  190 (212)
T ss_dssp             E-E---EETTEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             E-E---ccCCeEEEccCChhhCEEEEEEeecCCCcee
Confidence            1 1   1234799999999999999999999998764

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.40  E-value=1.3e-12  Score=114.69  Aligned_cols=111  Identities=22%  Similarity=0.296  Sum_probs=87.2

Q ss_pred             CCCCCCCCCcEEEecCCC------CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeecc
Q psy8771         561 SVGPGPLSAPVLVKTQQG------VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQE  634 (904)
Q Consensus       561 ~~g~~~~S~~~~~~t~~~------~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~  634 (904)
                      ..|.|++|..+.+.|...      .|.+|.++++...+ +++.|+|.++..                             
T Consensus         3 ~~G~g~~S~~~~~~T~~~~~~~~~~P~~P~~l~~~~~~-~sv~l~W~~P~~-----------------------------   52 (126)
T 1x5i_A            3 SGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLV-TSIVVSWTPPEN-----------------------------   52 (126)
T ss_dssp             SCCCCCCCCCCCSCCCCTTSBCSSCCCSCSEEEEEEET-TEEEEEEECCSC-----------------------------
T ss_pred             CCccCCCCCCEEeECccccCccCCCCCCCCeeEEEecC-CEEEEEEcCCCC-----------------------------
Confidence            568889999999999887      88999999999987 899999999875                             


Q ss_pred             ceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCC
Q psy8771         635 TAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY  714 (904)
Q Consensus       635 ~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~  714 (904)
                                  .++.+.+|.|+|+...............+.++|.+|+|++.|.|+|+|+|..|.|.++. ..+.|...
T Consensus        53 ------------~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~~  119 (126)
T 1x5i_A           53 ------------QNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLY-ESAVTRPH  119 (126)
T ss_dssp             ------------TTBCCCEEEEEECSSCGGGEEEECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCC-CCEECCCC
T ss_pred             ------------CCCCEeEEEEEEEcCCCCceEEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCccee-eEEecccC
Confidence                        45678888888874322222233345567999999999999999999999999998875 44555543

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C

Probab=99.40  E-value=2.9e-12  Score=107.31  Aligned_cols=96  Identities=27%  Similarity=0.478  Sum_probs=78.7

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      .|..+|.++.+...++++|.|+|++|..  .+|.+.+|.|.|+..+......|..... ...+++.|.+|+|++.|.|+|
T Consensus         3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V   82 (102)
T 3n1f_C            3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKM   82 (102)
T ss_dssp             -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEE
T ss_pred             CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEE
Confidence            5678899999999999999999999864  6789999999999876432234554443 556789999999999999999


Q ss_pred             EEEeCCCCCCCCCcEEEec
Q psy8771         557 QAFTSVGPGPLSAPVLVKT  575 (904)
Q Consensus       557 ~a~~~~g~~~~S~~~~~~t  575 (904)
                      +|+|..|.|+.|..+.++|
T Consensus        83 ~A~n~~G~G~~S~~~~~~T  101 (102)
T 3n1f_C           83 QCFNEGGESEFSNVMICET  101 (102)
T ss_dssp             EEEETTEECCCCCCEEEEC
T ss_pred             EEECCCcCCCCCCCEEeec
Confidence            9999999999999888876

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}

Probab=99.40  E-value=2.3e-12  Score=109.96  Aligned_cols=99  Identities=23%  Similarity=0.239  Sum_probs=82.3

Q ss_pred             CCCCCCCCCCcEEEe--cCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEE
Q psy8771         713 QYVPGAPPQNVSCEP--LSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRI  790 (904)
Q Consensus       713 ~~~p~~~P~~l~~~~--~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~  790 (904)
                      ...|. +|.++++..  .+.+++.|+|++|.  ..+|.+.+|.|+|+..+...+  .... ...+.++|.+|++++.|.|
T Consensus         5 ~~~P~-~P~~l~~~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~--~~~~-~~~~~~~l~~L~p~t~Y~~   78 (108)
T 2dm4_A            5 SSGPD-APRNLQLSLPREAEGVIVGHWAPPI--HTHGLIREYIVEYSRSGSKMW--ASQR-AASNFTEIKNLLVNTLYTV   78 (108)
T ss_dssp             CCCTT-SCEEEEEECCTTCSSCEEEEEECCS--CCSSCEEEEEEEEEETTCSCC--EEEE-ESSSEEEECSCCSSCEEEE
T ss_pred             CCCCc-CCcCeEEEEeccCCCEEEEEEcCCC--CCCCcEEEEEEEEEECCCCCe--EEec-CCccEEEeCCCCCCCEEEE
Confidence            34565 689998766  58899999999994  678999999999998775433  2222 2677999999999999999


Q ss_pred             EEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771         791 WVLAGTSIGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       791 ~V~a~~~~g~g~~s~~~~~~t~~~~P~  817 (904)
                      +|+|.|..|.|++|+++.++|..+.|+
T Consensus        79 ~V~A~n~~G~g~~S~~~~~~T~~~~P~  105 (108)
T 2dm4_A           79 RVAAVTSRGIGNWSDSKSITTIKGSGP  105 (108)
T ss_dssp             EEEEEESSCEEEECCCEEEECCSCSSC
T ss_pred             EEEEECCCceeCCCCCEEEECCCCCCC
Confidence            999999999999999999999877775

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.39  E-value=3.1e-12  Score=111.77  Aligned_cols=114  Identities=18%  Similarity=0.276  Sum_probs=86.8

Q ss_pred             CCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEcc-CCCCccEEEEec-CcceEE
Q psy8771         701 GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG-RSDSEASIVTLK-NQTSFV  778 (904)
Q Consensus       701 ~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~-~~~~~~~~~~~~-~~~~~~  778 (904)
                      +..+......+...+|. +|.++.+...+.+++.|+|.++  ...++++.+|.|+|+... ...+......+. ..+.++
T Consensus         3 ~~~~~~~~~~~~~~~P~-~P~~~~~~~~~~~sv~l~W~p~--~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~   79 (121)
T 1x4z_A            3 SGSSGSQPDHGRLSPPE-APDRPTISTASETSVYVTWIPR--GNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVE   79 (121)
T ss_dssp             CCCCCCCCCSSSCCCCC-CCCCCEEEECCSSEEEEECCCC--CCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEE
T ss_pred             cccccceeccCcCCCCc-cCCCCEEEEccCCEEEEEEECC--CCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEE
Confidence            33343444445555555 6899999999999999999965  456678999999999876 333432222334 788999


Q ss_pred             ecCCCCCceEEEEEEEeeCCCCCCCCCcEE-eecCCCCCC
Q psy8771         779 LDELKKWTEYRIWVLAGTSIGDGPSSYPIT-IRTHEDDPS  817 (904)
Q Consensus       779 i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~-~~t~~~~P~  817 (904)
                      |.+|.+++.|.|+|+|.|..|.|.+|.... +++.+.+|+
T Consensus        80 v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~~P~  119 (121)
T 1x4z_A           80 ITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGSGPS  119 (121)
T ss_dssp             EESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSSCCC
T ss_pred             ECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCCCCC
Confidence            999999999999999999999999988764 777776664

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=99.39  E-value=9.5e-12  Score=119.38  Aligned_cols=178  Identities=15%  Similarity=0.157  Sum_probs=127.4

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEe-----CCCCCCcceEEEee---cCceEEEEcC-CCCCCeEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQ-----DQSLPMSAWETQVV---DNNQLTTISD-LTPHTIYT  553 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~-L~p~t~Y~  553 (904)
                      .+|.|+++...+.. ..|+|+++... .....|.|+|..     .+.   ..|.....   ...+.+.|.. |..+..|.
T Consensus         8 p~P~nv~~~s~n~~-~iL~W~p~~~~-~~~~~Y~V~y~~~~~~~~~~---~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~   82 (206)
T 4doh_B            8 PAPQQLSVLSTNMK-HLLMWSPVIAP-GETVYYSVEYQGEYESLYTS---HIWIPSSWCSLTEGPECDVTDDITATVPYN   82 (206)
T ss_dssp             CCCCCCEEEEETTE-EEEECCCCCCS-SSCCEEEEEEEEHHHHHHST---TCCEEEEEEEEESSSEEECTTTCCSSSCEE
T ss_pred             CCCCeeEEEEeCCE-EEEEECCCCCC-CCCEEEEEEEEEeccccCCC---ccceecccccCCCCCEEcCCccccCCCCEE
Confidence            46899999988865 79999997532 234789999984     221   45765432   4567889985 77788999


Q ss_pred             EEEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEee
Q psy8771         554 IRVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDI  632 (904)
Q Consensus       554 ~~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~  632 (904)
                      +||+|.++.+.+.|+....+.... ..+. |..+.+.. ...+|.|.|.++.                            
T Consensus        83 ~RVrA~~~~~~S~w~~~~~f~~~~~t~i~-PP~v~v~~-~~~~i~V~~~~p~----------------------------  132 (206)
T 4doh_B           83 LRVRATLGSQTSAWSILKHPFNRQSTILT-RPGMEITK-DGFHLVIELEDLG----------------------------  132 (206)
T ss_dssp             EEEEEEETTEECCCEECSSCBCGGGCBCC-CCCEEEEE-ETTEEEEEECCCC----------------------------
T ss_pred             EEEEEEcCCCccCccccccccchhhcccC-CCeEEEEe-CCCEEEEEecCCC----------------------------
Confidence            999999988877776544443222 2223 44466664 6778888887652                            


Q ss_pred             ccceEEEeccCCCCCCCceeeEEEEEEeCCccccce--EEecccceEEEeCCCCCcEEEEEEEEEcCC--CCCCCCCCee
Q psy8771         633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHH--RRIGLVETYSLTGLYPNTLYYIWLAAQSPR--GEGATTPPIP  708 (904)
Q Consensus       633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~--~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~--G~~~~s~~~~  708 (904)
                                       .+..|.|.|+..+......  ........+.|.+|+|++.|.|+|+|+...  |.|.+|...-
T Consensus       133 -----------------~~l~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C  195 (206)
T 4doh_B          133 -----------------PQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTEC  195 (206)
T ss_dssp             -----------------TTCEEEEEEEESSSSCCCEEEEECCSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEE
T ss_pred             -----------------CcEEEEEEEEEcCCCceeEEeEEccCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEe
Confidence                             3678999998886655432  222335689999999999999999999863  7788888777


Q ss_pred             EEec
Q psy8771         709 VRTK  712 (904)
Q Consensus       709 ~~t~  712 (904)
                      +.|.
T Consensus       196 ~~t~  199 (206)
T 4doh_B          196 VEVQ  199 (206)
T ss_dssp             ECC-
T ss_pred             EEcc
Confidence            7764

>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*

Probab=99.39  E-value=2.3e-11  Score=132.59  Aligned_cols=315  Identities=12%  Similarity=0.121  Sum_probs=177.8

Q ss_pred             CCCCCcEEEeccCCceEEEEeCCCC--------------CCCceecc----cccccccceEEEEeeeccCCee--eeeee
Q psy8771          35 TAPRDVQVRPLSSSTMVIQWDEPET--------------PNGQITHP----PTRAARSHARLAAQSVLRRGRL--AHAVR   94 (904)
Q Consensus        35 ~~p~~l~~~~~~~~s~~v~W~~~~~--------------~~g~i~~~----~~~~~~~~~~~~~~~~~~~g~~--~~~~~   94 (904)
                      +....|.|...+.+.++|.|.+...              .+|.+...    .....|.....|...+. .|..  ..+.+
T Consensus        32 G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~-~g~~~s~~~~l  110 (404)
T 3p3y_A           32 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNK-FGTALSNRIRL  110 (404)
T ss_dssp             SSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEEEEECS-SCEEEEEEEEE
T ss_pred             CCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEEEEEcC-CCeEeeeeEEE
Confidence            3677888888888899999987531              13332221    12222333444444433 3433  23444


Q ss_pred             eccCCCCCCCCeEEcC-CCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cC-C
Q psy8771          95 QVADPVRRVPPQFSIP-PPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TE-S  168 (904)
Q Consensus        95 ~v~~~~~~~~P~~~~~-~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d-~  168 (904)
                      .+.     .+|.+... +.. ..+.+|+.+.|.|.+ .|.|.+.|.|++++...+....++.. .++.|.|.++  +| +
T Consensus       111 ~V~-----~~p~~~~~~~~~-~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~  184 (404)
T 3p3y_A          111 QVS-----KSPLWPKENLDP-VVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQ  184 (404)
T ss_dssp             EEC-----CCCCCCCCCCCC-EEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGS
T ss_pred             EEe-----ccCccccCCCCC-eEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCC
Confidence            443     33433333 334 889999999999999 89999999999985556665666654 5778999999  57 6


Q ss_pred             eEEEEEEEecCcceEE---EEEEEEEeecCCCCCCCC---CCcc-eEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC
Q psy8771         169 ENYTCIAASVLGVIET---STIVKVQCKYAPLLTLPV---APLD-VKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN  241 (904)
Q Consensus       169 g~Y~c~a~n~~g~~~~---~~~l~v~~~~~~~~~~P~---~p~~-l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~  241 (904)
                      |.|+|.|.|..|....   ...+.+..........|.   ++.. -.........+.|.+...+.+..  .+.|...+..
T Consensus       185 G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~--~v~W~~~~~~  262 (404)
T 3p3y_A          185 TDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTP--DIAWYKKGGD  262 (404)
T ss_dssp             SCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCC--EEEEEETTBC
T ss_pred             cceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCC--cEEEEECCEE
Confidence            9999999998886332   234444411100001111   1101 11222334567777766544333  3555544322


Q ss_pred             C--CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCC
Q psy8771         242 T--PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPE  319 (904)
Q Consensus       242 ~--~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~  319 (904)
                      .  ..... ......+.|.++...+.+.|+|.|.|..|....+..+.+...+. ....|.+..+..  ...+.|.+....
T Consensus       263 ~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~-~~~~~~~~~v~~--g~~~~l~C~~~g  338 (404)
T 3p3y_A          263 LPSDKAKF-ENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPY-WLDEPKNLILAP--GEDGRLVCRANG  338 (404)
T ss_dssp             CCTTTEEE-EGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEE-EEECCCCEEECT--TCCEEEECEEEE
T ss_pred             CCCCcccc-cccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCe-eeccCCcceeec--CCcEEEEEEccc
Confidence            1  11111 12246799999999999999999999988643332233322110 011233333322  234455554332


Q ss_pred             CCCceeeEEEEEee-----------ceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         320 TPNGQITAKHHRRI-----------GLVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       320 ~~~~~~~~~~~~~~-----------~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                      .+...+.++.....           .....+.|..+.....-.+++.|.|..|.
T Consensus       339 ~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~  392 (404)
T 3p3y_A          339 NPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGY  392 (404)
T ss_dssp             ESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEE
T ss_pred             cCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCc
Confidence            22223333321110           01225788888888888888888887774

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=3e-12  Score=108.99  Aligned_cols=74  Identities=18%  Similarity=0.231  Sum_probs=60.6

Q ss_pred             CCCceeeEEEEEEeCCccc-cceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCC
Q psy8771         647 SGENIISYELYWNDTYAKA-KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP  720 (904)
Q Consensus       647 ~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P  720 (904)
                      .++.+.+|.|+|+...... +..........+.|.+|.|++.|.|+|+|+|..|.|.+|..+.++|...+|..||
T Consensus        32 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~P~~Pp  106 (106)
T 2dju_A           32 NSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQSGPSSG  106 (106)
T ss_dssp             CSSCCSEEEEEEEETTCCSCCCCBCCCCSSEEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSSCCCCC
T ss_pred             CCCCceEEEEEEEECCCCCCeEEccCCCccEEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCCCCCCC
Confidence            3567899999998876543 3333333567899999999999999999999999999999999999999888765

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=6e-12  Score=107.46  Aligned_cols=100  Identities=23%  Similarity=0.374  Sum_probs=82.4

Q ss_pred             cCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEE
Q psy8771         477 KQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       477 ~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      ....| .+|.++++..++.++|.|+|++|...+|.+.+|.|+|+..+......|... ....+.+.|.+|.|++.|.|+|
T Consensus         4 ~~~~P-~~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V   81 (109)
T 2e7h_A            4 GSSGP-PAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFL-KTSENRAELRGLKRGASYLVQV   81 (109)
T ss_dssp             SCCSS-CCCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEE-EESSSEEEEESCCTTSCEEEEE
T ss_pred             CCCCC-CCCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEE-ccCCCEEEECCCCCCCeEEEEE
Confidence            33344 678899999999999999999998888899999999998763222334333 3455689999999999999999


Q ss_pred             EEEeCCCCCCCCCcEEEecCCC
Q psy8771         557 QAFTSVGPGPLSAPVLVKTQQG  578 (904)
Q Consensus       557 ~a~~~~g~~~~S~~~~~~t~~~  578 (904)
                      +|+|..|.|++|..+.++|...
T Consensus        82 ~A~n~~G~g~~S~~~~~~T~~~  103 (109)
T 2e7h_A           82 RARSEAGYGPFGQEHHSQTQLD  103 (109)
T ss_dssp             EEECSSCBCCCCSCEECCCCCC
T ss_pred             EEEeCCccCCCCCCEEEEcCCC
Confidence            9999999999999999888653

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.39  E-value=4.1e-12  Score=108.75  Aligned_cols=101  Identities=19%  Similarity=0.279  Sum_probs=85.3

Q ss_pred             CCCCCCCCeEE-EecCCceEEEEecCCCC-CCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEE
Q psy8771         480 EPGTAPRDVQV-RPLSSSTMVIQWDEPET-PNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       480 ~p~~~p~~l~v-~~~~~~~~~l~W~~p~~-~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~  557 (904)
                      .+|.+|.++.+ ...+.+++.|+|++|.. .++.+.+|.|+|+....   ..|........+.+.+.+|.+++.|.|+|+
T Consensus         7 ~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~   83 (110)
T 2crz_A            7 GPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEK---DEPREVYQGSEVECTVSSLLPGKTYSFRLR   83 (110)
T ss_dssp             CCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTS---CCCEEEEEESCSEEEEESCCTTCEEEECCE
T ss_pred             CCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCC---CceEEEEeCCcEEEEECCcCCCCEEEEEEE
Confidence            45578999988 56788899999988754 44689999999997643   456666667788899999999999999999


Q ss_pred             EEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         558 AFTSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       558 a~~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      |.|..|.|.+|..+.+.|...+|.+|
T Consensus        84 A~n~~G~g~~S~~~~~~T~~~~P~~P  109 (110)
T 2crz_A           84 AANKMGFGPFSEKCDITTAPGSGPSS  109 (110)
T ss_dssp             EECSSCBCCCCCCEEEECCCSCCCCC
T ss_pred             EEcCCccCCCCCccccccCCCCCCCC
Confidence            99999999999999999988887766

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.39  E-value=4.1e-12  Score=109.57  Aligned_cols=102  Identities=24%  Similarity=0.386  Sum_probs=83.9

Q ss_pred             CCCCCCCCCeEEEecCCceEEEEecCCC--CCCCceeeEEEEEEeCCCCCCcceE-EEeecCceEEEEcCCCCCCeEEEE
Q psy8771         479 YEPGTAPRDVQVRPLSSSTMVIQWDEPE--TPNGQITGYKVYYTQDQSLPMSAWE-TQVVDNNQLTTISDLTPHTIYTIR  555 (904)
Q Consensus       479 ~~p~~~p~~l~v~~~~~~~~~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~p~t~Y~~~  555 (904)
                      ..|+.+|.++.+..++.++|.|+|++|.  ..++.+.+|.|+|+.........|. .......+.+.|.+|.|++.|.|+
T Consensus         6 ~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~   85 (114)
T 1x4y_A            6 SGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIK   85 (114)
T ss_dssp             CSCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEE
T ss_pred             cCCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEEE
Confidence            4677899999999999999999999985  4678999999999876543222332 233355678999999999999999


Q ss_pred             EEEEeCCCCCCCCCcEEEecCCCCC
Q psy8771         556 VQAFTSVGPGPLSAPVLVKTQQGVP  580 (904)
Q Consensus       556 V~a~~~~g~~~~S~~~~~~t~~~~p  580 (904)
                      |+|+|..|.|++|..+.++|....+
T Consensus        86 V~A~n~~G~g~~S~~v~~~T~~~~~  110 (114)
T 1x4y_A           86 MQCFNEGGESEFSNVMICETKARSG  110 (114)
T ss_dssp             EEEECTTCCCCCCCCEEEECCCCCC
T ss_pred             EEEEcCCccCCCcCCEEEEeCCCCC
Confidence            9999999999999999999976543

>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4

Probab=99.39  E-value=1.3e-11  Score=134.04  Aligned_cols=167  Identities=15%  Similarity=0.184  Sum_probs=112.0

Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCCeEEEeeCCccccCCCC-ce--eecceEEEEeee--cCCeEEEE
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMPFVKWRKGQNIELTPDD-KL--PVGRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~-~~--~~~~~~l~i~~l--~d~g~Y~c  173 (904)
                      .+..||.|...|.+ +.+.+|+.++|.|.+.| .|.+.|+|+|+ +..+.... ++  ...+++|.|.++  +|+|.|+|
T Consensus         2 ~v~~~P~~~~~p~~-~~v~~G~~v~l~C~~~~~~p~~~v~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C   79 (395)
T 1bih_A            2 PVDKYPVLKDQPAE-VLFRENNPTVLECIIEGNDQGVKYSWKKD-GKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQC   79 (395)
T ss_dssp             ---CCCEECCCCSE-EEEETTSCEEECCCEESCCSSCEEEEEES-SSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEE
T ss_pred             CcCCCCEeecCCCc-eEEeCCCEEEEEEEEecCCCCceEEEEEC-CcCcccccceEEEecCCceEEEecCCCCCCcEEEE
Confidence            35789999999988 99999999999999999 89999999999 66665443 22  236789999999  69999999


Q ss_pred             EEEecCcceE-EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCC--C---------
Q psy8771         174 IAASVLGVIE-TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKA--A---------  240 (904)
Q Consensus       174 ~a~n~~g~~~-~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~--~---------  240 (904)
                      .|.|..|... ..+.|.+.....    ++..|.+  ........++|.|... +.+..  .+.|...+  .         
T Consensus        80 ~a~n~~g~~~s~~~~l~v~~~~~----p~~~~~~--~~~~~G~~v~l~C~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~  151 (395)
T 1bih_A           80 FAETPAGVASSRVISFRKTYLIA----SPAKTHE--KTPIEGRPFQLDCVLPNAYPKP--LITWKKRLSGADPNADVTDF  151 (395)
T ss_dssp             EEEETTEEEECCCEEEEEEEEEC----CCCEEEE--ECCBTTEEEEECCCCCEEESCC--EEEEEEEETTSCGGGCCCCC
T ss_pred             EEEeCCCeEEeEEEEEEEEEeec----CCcCCcc--eeeeeCCcEEEEecCCCCCCCC--eEEEEecCCCcCcccccccc
Confidence            9999988754 335566552111    1111212  2223455778888753 22222  23333321  0         


Q ss_pred             CCCeEEeecceeceEEEcCCCCCCeE---EEEEEEEcCCCCC
Q psy8771         241 NTPYSEISGIITTYYTVRNLSPYTEY---EFYIIAVNNLGRG  279 (904)
Q Consensus       241 ~~~~~~~~~~~~~~~~i~~L~p~~~Y---~~~v~a~n~~g~s  279 (904)
                      ...+. .  .....+.|.++...+.+   .|+|.|.|..|..
T Consensus       152 ~~~~~-~--~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~  190 (395)
T 1bih_A          152 DRRIT-A--GPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDE  190 (395)
T ss_dssp             CTTEE-E--CTTSCEEEEEECGGGCCSSEEEEEEEECTTCSS
T ss_pred             cccEE-E--cCCCcEEEEEEeeccCCCceEEEEEEEecccce
Confidence            11111 1  12346899999998888   9999999998864

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.38  E-value=4e-12  Score=108.52  Aligned_cols=100  Identities=19%  Similarity=0.301  Sum_probs=78.9

Q ss_pred             cCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeE
Q psy8771         575 TQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISY  654 (904)
Q Consensus       575 t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y  654 (904)
                      |....|.+|.++++...+.+++.|+|.+|..                                         .++.+.+|
T Consensus         3 T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~-----------------------------------------~~g~i~~Y   41 (108)
T 2djs_A            3 SGSSGPSTVPIMHQVSATMRSITLSWPQPEQ-----------------------------------------PNGIILDY   41 (108)
T ss_dssp             SCCCCCCCCSCCEEEEECSSEEEEECCCCSC-----------------------------------------CSSCEEEE
T ss_pred             cCCCCCCCCcceEEEecCCCEEEEEECCCCC-----------------------------------------CCCeEEEE
Confidence            4455667777777777777777777777754                                         56778899


Q ss_pred             EEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCC
Q psy8771         655 ELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYV  715 (904)
Q Consensus       655 ~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~  715 (904)
                      .|+|+..+...+ ..........+.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|.+..
T Consensus        42 ~v~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~  103 (108)
T 2djs_A           42 EIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS  103 (108)
T ss_dssp             EEEEEETTSCSTTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred             EEEEEECCCCCcceeEEecCccEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence            999988765544 2334456689999999999999999999999999999999999997653

>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E

Probab=99.38  E-value=5.7e-12  Score=134.92  Aligned_cols=214  Identities=10%  Similarity=0.035  Sum_probs=132.5

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEe
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQC  192 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~  192 (904)
                      ..+.+|++++|.|.+.|.|.|.|+|+|+ +..      +......|.|.++  +|+|.|+|.|.|..+..+....|.|. 
T Consensus       106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~------~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~-  177 (363)
T 1wio_A          106 THLLQGQSLTLTLESPPGSSPSVQCRSP-RGK------NIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL-  177 (363)
T ss_dssp             SSEESBSCEEEEEECCTTCCCCEEEECS-SSC------EEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEE-
T ss_pred             eEEecCCCEEEEEEcCCCCCCeEEEEcC-CCc------ccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEe-
Confidence            4568999999999999999999999999 432      3346789999999  69999999999988777777777777 


Q ss_pred             ecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCc--c-ceEEEEEEEeCCCC------------CCeEEee---------
Q psy8771         193 KYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE--T-LLYYVIQYKPKAAN------------TPYSEIS---------  248 (904)
Q Consensus       193 ~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~--~-~~~y~v~~~~~~~~------------~~~~~~~---------  248 (904)
                            ..|..|..+.+.  ....++|.+...+.  . .....+.|...+..            ..+....         
T Consensus       178 ------~~p~~~~~~~~~--~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (363)
T 1wio_A          178 ------AFQKASSIVYKK--EGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQM  249 (363)
T ss_dssp             ------CCSCSEEEEEEE--TBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBC
T ss_pred             ------cCCCCCCceEEe--cCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhc
Confidence                  555555433332  23455566643321  1 12234455443321            1111110         


Q ss_pred             -cceeceEEEcCCCCCCeEEEEEEEEcC--CCCCCCCCCeEEecCCCCCCCCCCceEecccCC--CeeEEEecCCCCCCc
Q psy8771         249 -GIITTYYTVRNLSPYTEYEFYIIAVNN--LGRGPPSSPAVITTGETEPGTAPRDVQVRPLSS--STMVIQWDEPETPNG  323 (904)
Q Consensus       249 -~~~~~~~~i~~L~p~~~Y~~~v~a~n~--~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~--~~v~l~W~~p~~~~~  323 (904)
                       ......+.|.++...+.+.|+|.|.|.  .|.......+.+...    ...+..|.+...+.  ..+.+.|......-.
T Consensus       250 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v----~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~  325 (363)
T 1wio_A          250 GKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA----TQLQKNLTCEVWGPTSPKLMLSLKLENKEAK  325 (363)
T ss_dssp             CSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEE----CCCSSSEEEEEESSCCTTCCEEEECSSSSCS
T ss_pred             ccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEe----cCCCeeEEEEEccccCCCccEEEEeCCCcee
Confidence             111348999999999999999999999  775432222333211    23445666554433  345588886543221


Q ss_pred             eeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcC
Q psy8771         324 QITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP  359 (904)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~  359 (904)
                      .           ...+.|..+.....-.+++.|.+.
T Consensus       326 ~-----------~~~l~i~~v~~~d~G~Y~C~a~~~  350 (363)
T 1wio_A          326 V-----------SKREKAVWVLNPEAGMWQCLLSDS  350 (363)
T ss_dssp             E-----------EESSSEEEESSCCSEEEEEEECSS
T ss_pred             e-----------eeeeeeeeeccccceeEEEEEecC
Confidence            1           112344555555666666676654

>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}

Probab=99.38  E-value=4e-12  Score=132.40  Aligned_cols=173  Identities=16%  Similarity=0.235  Sum_probs=109.5

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee---c---ceEEEEeee---cCCeEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV---G---RNVLTLDRV---TESENY  171 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~---~---~~~l~i~~l---~d~g~Y  171 (904)
                      ...||.|...|.+ +.+.+|+.+.|.|.+.|.|.+.|+|+|+ +..+... ++..   .   ...|.|.++   +|+|.|
T Consensus         3 ~~~~P~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~~i~W~k~-g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y   79 (304)
T 2yd9_A            3 GEEPPRFIKEPKD-QIGVSGGVASFVCQATGDPKPRVTWNKK-GKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVY   79 (304)
T ss_dssp             -CCCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEC--------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEE
T ss_pred             CccCCeeeecCCc-eEecCCCeEEEEEEEEEeCCCeEEEEEC-CEECCCC-ceEEEEecCCCceEEEEecccccCCCeEE
Confidence            3678999999998 9999999999999999999999999999 6666433 3322   2   257999987   589999


Q ss_pred             EEEEEecCcceEEEEEEEEEeecCCCCCCC---CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe----
Q psy8771         172 TCIAASVLGVIETSTIVKVQCKYAPLLTLP---VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY----  244 (904)
Q Consensus       172 ~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~----  244 (904)
                      +|.|.|..|..+..+.|.|..........|   ..|....+  .....+.|.+...+.+..  .+.|...+.....    
T Consensus        80 ~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v--~~g~~v~l~C~~~g~p~~--~v~W~k~~~~~~~~~~~  155 (304)
T 2yd9_A           80 ECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVV--ERTRTATMLCAASGNPDP--EITWFKDFLPVDPSASN  155 (304)
T ss_dssp             EEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEE--ETTSCEEECCEEECSSCC--EEEEEETTEECCGGGGT
T ss_pred             EEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEE--eCCCeEEEEEECccCCCC--eEEEEECCEECcCCCCc
Confidence            999999999988888898883211000001   01222222  223455555554322222  2444433211000    


Q ss_pred             EEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         245 SEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       245 ~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..........+.|.++...+.+.|+|.|.|..|...
T Consensus       156 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~  191 (304)
T 2yd9_A          156 GRIKQLRSGALQIESSEETDQGKYECVATNSAGVRY  191 (304)
T ss_dssp             TSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             ceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEE
Confidence            001112234799999999999999999999988643

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.38  E-value=4e-12  Score=108.10  Aligned_cols=99  Identities=22%  Similarity=0.307  Sum_probs=78.9

Q ss_pred             CCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEE
Q psy8771         577 QGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL  656 (904)
Q Consensus       577 ~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v  656 (904)
                      ...|.+|.++++..++.+++.|+|.++..                                         .++.+.+|+|
T Consensus         5 ~~~P~~P~~l~~~~~~~~si~l~W~~p~~-----------------------------------------~~g~i~~Y~v   43 (106)
T 2ed8_A            5 SSGPGPVENLQAVSTSPTSILITWEPPAY-----------------------------------------ANGPVQGYRL   43 (106)
T ss_dssp             CCCCCCCEEEEEECSSTTEEEEEEECCSS-----------------------------------------CSSCCCEEEE
T ss_pred             CCCCcCCceeEEEecCCCEEEEEECCCCC-----------------------------------------CCCCeeEEEE
Confidence            34667777777777777788888877754                                         5667888999


Q ss_pred             EEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771         657 YWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG  717 (904)
Q Consensus       657 ~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~  717 (904)
                      +|+..+...+.... ...+++.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|.+..|.
T Consensus        44 ~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~  103 (106)
T 2ed8_A           44 FCTEVSTGKEQNIE-VDGLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDSGP  103 (106)
T ss_dssp             EEEETTTCCEEEEE-ECSSCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCCC
T ss_pred             EEEECCCCceEEEe-CCccEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCCCC
Confidence            88877655443332 3468999999999999999999999999999999999999988755

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.38  E-value=4.4e-12  Score=108.43  Aligned_cols=101  Identities=17%  Similarity=0.220  Sum_probs=85.0

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      ++.+|..+.+...+.+++.|+|.+|.+.++ .+.+|.|+|+.....  ..|........+.+.+.+|.+++.|.|+|+|+
T Consensus         7 ~P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~   84 (109)
T 1x5x_A            7 GPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSG--YGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAY   84 (109)
T ss_dssp             CCCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSS--CCCEEEEEESCSEEEEESCCSSCEEEEEEEEE
T ss_pred             CCcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCC--cceEEeEeCCccEEEECCCCCCCEEEEEEEEE
Confidence            446777788889999999999999987777 789999999876532  34655555667889999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         560 TSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      |..|.|.+|..+.+.|....|.+|
T Consensus        85 n~~G~s~~S~~~~~~T~~~~P~~p  108 (109)
T 1x5x_A           85 NSEGKSNPSEVVEFTTCPDSGPSS  108 (109)
T ss_dssp             CSSCEEEECCCEEEECCCCCCCCC
T ss_pred             eCCCCcCCccCEEeEeCCCCCCCC
Confidence            999999999999999987777655

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.38  E-value=4.6e-12  Score=108.47  Aligned_cols=104  Identities=17%  Similarity=0.205  Sum_probs=82.1

Q ss_pred             cCCCCCCCCCCceE-EecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceee
Q psy8771         575 TQQGVPSQPRDLRA-VDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIIS  653 (904)
Q Consensus       575 t~~~~p~~p~~~~~-~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~  653 (904)
                      |....|.+|.++.+ ...+.+++.|+|.++..                                        .+++.+.+
T Consensus         4 t~~~~P~~P~~~~~~~~~~~~sv~l~W~~P~~----------------------------------------~~~~~i~~   43 (110)
T 2crz_A            4 GSSGPPGPCLPPRLQGRPKAKEIQLRWGPPLV----------------------------------------DGGSPISC   43 (110)
T ss_dssp             SCCCCCCCCCCCEECSCCCSSEEEEECCCCSC----------------------------------------CTTSCCCE
T ss_pred             CcCCCCCCCCCceeccccCCCEEEEEeCCCCC----------------------------------------CCCceeEE
Confidence            34456677777777 45666778888876643                                        14567899


Q ss_pred             EEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC
Q psy8771         654 YELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA  718 (904)
Q Consensus       654 y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~  718 (904)
                      |.|+|+......+..........++|.+|.+++.|.|+|+|+|..|.|.+|..+.+.|...+|..
T Consensus        44 Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~P~~  108 (110)
T 2crz_A           44 YSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGSGPS  108 (110)
T ss_dssp             EEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSCCCC
T ss_pred             EEEEEEeCCCCceEEEEeCCcEEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCCCCC
Confidence            99999877666665555566789999999999999999999999999999999999998887763

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.37  E-value=5.6e-12  Score=111.29  Aligned_cols=118  Identities=19%  Similarity=0.333  Sum_probs=90.6

Q ss_pred             CCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEc
Q psy8771         467 ATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTIS  544 (904)
Q Consensus       467 ~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~  544 (904)
                      ..+....+...  .+|.+|.++.+...+.+++.|+|.++.+.++.+.+|.|+|+..... ...|.....  ...+. .+.
T Consensus         4 ~~s~~~~~~v~--~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~-~~~w~~~~~~~~~~~~-~i~   79 (127)
T 1uey_A            4 GSSGPTPAPVY--DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHK-PGLWHHQTEVSGTQTT-AQL   79 (127)
T ss_dssp             CCCCCCCCCCC--CSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTC-TTCEEEEEEEESSCCE-EEE
T ss_pred             CCcEEEEEEee--cCCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCC-CCccEEEeeeCCCceE-EEe
Confidence            33444444333  3557999999999999999999999877778999999999876432 245655432  34444 577


Q ss_pred             CCCCCCeEEEEEEEEeCCCCCCCCCc-EEEecCCCCCC-CCCCceE
Q psy8771         545 DLTPHTIYTIRVQAFTSVGPGPLSAP-VLVKTQQGVPS-QPRDLRA  588 (904)
Q Consensus       545 ~L~p~t~Y~~~V~a~~~~g~~~~S~~-~~~~t~~~~p~-~p~~~~~  588 (904)
                      +|.|++.|.|+|+|+|..|.|.+|.. ..++|....|. +|.++.+
T Consensus        80 ~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~  125 (127)
T 1uey_A           80 NLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPS  125 (127)
T ss_dssp             CCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCCC
T ss_pred             cCCCCCEEEEEEEEEeCCccCCccccccceEcCCCCCCCCCceeEe
Confidence            99999999999999999999999988 47888888875 5777765

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4

Probab=99.37  E-value=1.3e-11  Score=120.75  Aligned_cols=171  Identities=16%  Similarity=0.206  Sum_probs=115.3

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccc------------cCCCCceeecceEEEEeee--cCCeE
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIE------------LTPDDKLPVGRNVLTLDRV--TESEN  170 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~------------~~~~~~~~~~~~~l~i~~l--~d~g~  170 (904)
                      +.|...+.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..            .....|+......|.|.++  +|+|.
T Consensus         2 ~~v~~~~~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~   79 (212)
T 1f97_A            2 GSVYTAQSD-VQVPENESIKLTCTYSGFSSPRVEWKFV-QGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGE   79 (212)
T ss_dssp             CEEECSCSE-EEEETTCCEEEECEEESCSSEEEEEEEE-ETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEE
T ss_pred             ceEEecCCC-eEEEcCCCEEEEeEeCCCCCcEEEEEEC-CCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeE
Confidence            456666777 9999999999999999999999999998 433            2234566666789999999  69999


Q ss_pred             EEEEEEecCc--ceEEEEEEEEEeecCCCCCCCCCC---cceEEEeecCCeEEEEEe-CCCccceEEEEEEEeCCC-CCC
Q psy8771         171 YTCIAASVLG--VIETSTIVKVQCKYAPLLTLPVAP---LDVKISEVTATSVRLDWT-YPSETLLYYVIQYKPKAA-NTP  243 (904)
Q Consensus       171 Y~c~a~n~~g--~~~~~~~l~v~~~~~~~~~~P~~p---~~l~~~~~~~~sv~l~W~-~~~~~~~~y~v~~~~~~~-~~~  243 (904)
                      |+|.|.|..|  ..+....|.|.       ..|..+   ....+  .....++|.+. ..+.+..  .+.|...+. ...
T Consensus        80 Y~C~~~~~~g~~~~~~~~~l~V~-------~~p~~~~~~~~~~~--~~g~~~~l~C~~~~~~p~~--~i~W~~~~~~~l~  148 (212)
T 1f97_A           80 YTCMVSEEGGQNYGEVSIHLTVL-------VPPSKPTISVPSSV--TIGNRAVLTCSEHDGSPPS--EYSWFKDGISMLT  148 (212)
T ss_dssp             EEEEEEETTSSSEEEEEEEEEEE-------BCCCCCEEECCSEE--ETTSCEEEEEECSCCBSCC--EEEEEETTEESBC
T ss_pred             EEEEEEccCCCcccEEEEEEEEE-------cCCCCcccCCcccc--CCCCeEEEEEEcccCcCCC--EEEEEeCCccccc
Confidence            9999999877  45666777776       333222   11222  23456777777 3333333  244444322 111


Q ss_pred             e-----------EEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771         244 Y-----------SEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT  288 (904)
Q Consensus       244 ~-----------~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~  288 (904)
                      .           ..........+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~  204 (212)
T 1f97_A          149 ADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMD  204 (212)
T ss_dssp             -----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEE
T ss_pred             ccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEE
Confidence            0           00111234679999999999999999999999976334444443

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.37  E-value=4.3e-12  Score=112.04  Aligned_cols=106  Identities=23%  Similarity=0.333  Sum_probs=82.4

Q ss_pred             CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEE
Q psy8771         578 GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY  657 (904)
Q Consensus       578 ~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~  657 (904)
                      ..|.+|.++.+..++.+++.|+|.++.+                                         +++.+.+|.|+
T Consensus        15 ~~P~~P~~~~~~~~~~~sv~l~W~p~~~-----------------------------------------~~~~i~~Y~v~   53 (127)
T 1uey_A           15 DVPNPPFDLELTDQLDKSVQLSWTPGDD-----------------------------------------NNSPITKFIIE   53 (127)
T ss_dssp             CSCCCCEEEEEECCSSSCEEEEEECCCC-----------------------------------------CSSCEEEEEEE
T ss_pred             cCCcCCCCcEEEEccCCEEEEEEECCCC-----------------------------------------CCCCceEEEEE
Confidence            4677888888888888889999987754                                         56678888888


Q ss_pred             EEeCCc--cccceEE--ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCC-eeEEecCCCCCCCCCCcEE
Q psy8771         658 WNDTYA--KAKHHRR--IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYVPGAPPQNVSC  725 (904)
Q Consensus       658 ~~~~~~--~~~~~~~--~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~-~~~~t~~~~p~~~P~~l~~  725 (904)
                      |+....  ..+....  ....+. .+.+|.|++.|.|+|+|+|..|.|.+|.. ..++|...+|..+|.+|.+
T Consensus        54 ~~~~~~~~~~w~~~~~~~~~~~~-~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~  125 (127)
T 1uey_A           54 YEDAMHKPGLWHHQTEVSGTQTT-AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPS  125 (127)
T ss_dssp             EEBTTTCTTCEEEEEEEESSCCE-EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCCC
T ss_pred             EEECCCCCCccEEEeeeCCCceE-EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCCCCCCCceeEe
Confidence            887642  2232221  223334 57899999999999999999999999987 4899999999888988865

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}

Probab=99.37  E-value=3.2e-11  Score=116.39  Aligned_cols=126  Identities=19%  Similarity=0.282  Sum_probs=89.0

Q ss_pred             cceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec-CCCEEEEEecCCCCCCCCccEEEE
Q psy8771         674 VETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL-SSTSIRISWEPPPVERSNGHIVYY  752 (904)
Q Consensus       674 ~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~-~~~~v~l~W~~~~~~~~~g~~~~Y  752 (904)
                      ...+.+..|...+.|.|+|.|.|..|.+. |..+.+.....+.+.||.++.+... ..+++.|+|++|..  .. ....|
T Consensus        68 ~~~C~~~~~~~~~~Y~~~V~a~N~~G~~~-s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~--~~-~~l~y  143 (206)
T 3v6o_A           68 FYECIFQPIFLLSGYTMWIRINHSLGSLD-SPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVF--PE-NNLQF  143 (206)
T ss_dssp             CEEEEECSCCTTSCEEEEEEEC---CCEE-CCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC-----------CEEE
T ss_pred             CceEEeCcHHhcccEEEEEEEEcCCcccc-CCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCC--CC-CcEEE
Confidence            34788888988999999999999988765 5567776666666668999998765 68899999999843  22 35899


Q ss_pred             EEEEEEccC-CCCccEEEEec--CcceEEecCCCCCceEEEEEEEeeCCCCCCCCC
Q psy8771         753 KLQFVETGR-SDSEASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSY  805 (904)
Q Consensus       753 ~v~~~~~~~-~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~  805 (904)
                      +|+|+..+. ..+  ......  ....+.+.+|+|++.|.|+|||.+..|.|.+|+
T Consensus       144 ev~y~~~~~~~~w--~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe  197 (206)
T 3v6o_A          144 QIRYGLSGKEVQW--KMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSN  197 (206)
T ss_dssp             EEEEEESSSSCCC--EEEEECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred             EEEEEECCCCCce--EEEecccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence            999998763 233  233332  345789999999999999999999877776654

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}

Probab=99.37  E-value=6.3e-12  Score=107.22  Aligned_cols=98  Identities=32%  Similarity=0.497  Sum_probs=83.6

Q ss_pred             CCCCCCeEEEe--cCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         482 GTAPRDVQVRP--LSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       482 ~~~p~~l~v~~--~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      |.+|.++++..  .+.+++.|+|++|.+.++.+.+|.|+|+....   ..|.... ...+.+.|.+|.|++.|.|+|+|+
T Consensus         8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~---~~~~~~~-~~~~~~~l~~L~p~t~Y~~~V~A~   83 (108)
T 2dm4_A            8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGS---KMWASQR-AASNFTEIKNLLVNTLYTVRVAAV   83 (108)
T ss_dssp             TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTC---SCCEEEE-ESSSEEEECSCCSSCEEEEEEEEE
T ss_pred             CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCC---CCeEEec-CCccEEEeCCCCCCCEEEEEEEEE
Confidence            46899998766  57899999999998778899999999998764   3455543 345689999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         560 TSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      |..|.|++|..+.++|....|.+|
T Consensus        84 n~~G~g~~S~~~~~~T~~~~P~~p  107 (108)
T 2dm4_A           84 TSRGIGNWSDSKSITTIKGSGPSS  107 (108)
T ss_dssp             ESSCEEEECCCEEEECCSCSSCCC
T ss_pred             CCCceeCCCCCEEEECCCCCCCCC
Confidence            999999999999999988887765

>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}

Probab=99.37  E-value=4.2e-12  Score=109.72  Aligned_cols=89  Identities=22%  Similarity=0.408  Sum_probs=76.6

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceee--c-ce--EEEEeee--cCCeEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV--G-RN--VLTLDRV--TESENYT  172 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~--~-~~--~l~i~~l--~d~g~Y~  172 (904)
                      ...+|.|+..|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+.. ..++.+  + .+  +|.|.++  +|+|.|+
T Consensus        12 ~~~~p~f~~~p~~-~~v~~G~~v~L~C~~~g~p~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~   89 (116)
T 2kkq_A           12 HKRAPMFIYKPQS-KKVLEGDSVKLECQISAIPPPKLFWKRN-NEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYT   89 (116)
T ss_dssp             CCBCCCBSSCCCC-EEEETTEEEEEEEEBCCBSCCEEEEEET-TEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEE
T ss_pred             CCCCCeEEeCCCc-EEEeCCCcEEEEEEEeccCCCEEEEEEC-CEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEE
Confidence            3568999999999 9999999999999999999999999999 655543 455553  1 12  8999999  6999999


Q ss_pred             EEEEecCcceEEEEEEEEE
Q psy8771         173 CIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|.|..|..+..+.|.|.
T Consensus        90 C~a~N~~G~~~~~~~l~V~  108 (116)
T 2kkq_A           90 VSAVNEAGVTTCNTRLDVT  108 (116)
T ss_dssp             EEEEETTEEEEEEEEEEEE
T ss_pred             EEEEcCCCeEEEEEEEEEe
Confidence            9999999999999999998

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.36  E-value=1.5e-12  Score=111.32  Aligned_cols=100  Identities=23%  Similarity=0.306  Sum_probs=81.3

Q ss_pred             CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCcc----EEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceE
Q psy8771         714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH----IVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEY  788 (904)
Q Consensus       714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~----~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y  788 (904)
                      ..|..+|.+|++..++.++|.|+|.+|..  .++.    +.+|.|+|+......  .....+. ..+.++|.||+|++.|
T Consensus         6 ~~pp~~P~~l~~~~~s~tsi~lsW~~p~~--~~~~~~~~~~~Y~v~y~~~~~~~--~~~~~~~~~~~~~~i~gL~P~T~Y   81 (113)
T 1x5j_A            6 SGPMMPPVGVQASILSHDTIRITWADNSL--PKHQKITDSRYYTVRWKTNIPAN--TKYKNANATTLSYLVTGLKPNTLY   81 (113)
T ss_dssp             CCCCCCCEEEEEEEEETTEEEEEEECTTS--CSSSCCCSSCEEEEEECBSSSSS--CCCEECCBCSSEEEEESCCTTCEE
T ss_pred             CCCCCCCcceEEEEecCCEEEEEecCCCC--ccccccCcCceEEEEEEECCCCC--eEEEEEecCcCEEEeCCCCCCcEE
Confidence            34666899999999999999999999853  3333    459999998742222  2233444 7889999999999999


Q ss_pred             EEEEEEeeCCCCCCCCCcEEeecCCC-CCC
Q psy8771         789 RIWVLAGTSIGDGPSSYPITIRTHED-DPS  817 (904)
Q Consensus       789 ~~~V~a~~~~g~g~~s~~~~~~t~~~-~P~  817 (904)
                      .|+|+|.+..|.|++|..+.++|.++ +|+
T Consensus        82 ~f~V~A~~~~G~g~~S~~v~~~T~~~~~Ps  111 (113)
T 1x5j_A           82 EFSVMVTKGRRSSTWSMTAHGTTFELSGPS  111 (113)
T ss_dssp             CCEEEEECSSCBCCCCCCCCEECCCSSCCC
T ss_pred             EEEEEEecCCccCCCcccEEeeccCCCCCC
Confidence            99999999999999999999999998 885

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.36  E-value=6.2e-12  Score=107.58  Aligned_cols=101  Identities=17%  Similarity=0.275  Sum_probs=81.4

Q ss_pred             cCCCCCCCCCCeEEEecCCceEEEEecCCCCCC---C-c-eeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCe
Q psy8771         477 KQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN---G-Q-ITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTI  551 (904)
Q Consensus       477 ~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~---~-~-i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~  551 (904)
                      ....|+.+|..+.+..++.+++.|+|++|.+.+   + . |.+|.|+. ...  ....|........+.+++.+|.|++.
T Consensus        11 ~~~~pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~-~~~--~~~~~~~v~~~~~t~~~v~gL~p~t~   87 (120)
T 1wfu_A           11 HKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEE-EDP--KMHSYGVIYTGYATRHVVEGLEPRTL   87 (120)
T ss_dssp             TTCCCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEE-ECT--TTCCEEEEEEESCSEEEEESCCTTCE
T ss_pred             EeeCCCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEE-ecC--CCCceEEEecCCccEEEECCCCCCCE
Confidence            334566777777788889999999999998765   3 4 89999994 332  23667777666677899999999999


Q ss_pred             EEEEEEEEeCCCCCCCCCcEEEecCCCCC
Q psy8771         552 YTIRVQAFTSVGPGPLSAPVLVKTQQGVP  580 (904)
Q Consensus       552 Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p  580 (904)
                      |.|+|+|.|..|.|.+|..+.+.|...++
T Consensus        88 Y~frV~A~n~~G~s~~S~~~~~~T~~~p~  116 (120)
T 1wfu_A           88 YKFRLKVTSPSGEYEYSPVVSVATTRESG  116 (120)
T ss_dssp             EEEEEEEECSSSCEEECCCEEEECCCCCC
T ss_pred             EEEEEEEECCCCCCCCCccEeeEcCCCCC
Confidence            99999999999999999999999876543

>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}

Probab=99.36  E-value=4e-12  Score=107.58  Aligned_cols=90  Identities=16%  Similarity=0.212  Sum_probs=78.7

Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEE
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTC  173 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c  173 (904)
                      .+..+|.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+.    ...|.|.++  +|+|.|+|
T Consensus         4 ~~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C   81 (103)
T 3qp3_A            4 TLDHAPRITLRMRS-HRVPCGQNTRFILNVQSKPTAEVKWYHN-GVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRA   81 (103)
T ss_dssp             TTCEEEEEEECCCC-EEEETTCCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred             CCCCCCEEEeCCcc-eEEeCCCeEEEEEEEEecCCCEEEEEEC-CEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEE
Confidence            34678999999988 9999999999999999999999999999 7777666666542    347999998  69999999


Q ss_pred             EEEecCcceEEEEEEEEE
Q psy8771         174 IAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~  191 (904)
                      .|.|..|..+..+.|.|.
T Consensus        82 ~a~N~~G~~~~~~~l~V~   99 (103)
T 3qp3_A           82 VCTNYKGEASDYATLDVT   99 (103)
T ss_dssp             EEEETTEEEEEEEEEEEE
T ss_pred             EEEeCCCcEEEEEEEEEE
Confidence            999999999999999987

>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.36  E-value=3.2e-12  Score=109.69  Aligned_cols=95  Identities=23%  Similarity=0.439  Sum_probs=80.1

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceeec---ce--EEEEeee--cCCeEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPVG---RN--VLTLDRV--TESENYTC  173 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~~---~~--~l~i~~l--~d~g~Y~c  173 (904)
                      ..+|.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+.. ..++.+.   ++  .|.|.++  +|+|.|+|
T Consensus         6 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C   83 (110)
T 2dm2_A            6 SGAPFFEMKLKH-YKIFEGMPVTFTCRVAGNPKPKIYWFKD-GKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTI   83 (110)
T ss_dssp             SCCCCBSSCCCC-EEEETTCCEEEEEEBCCSSCCEEEEECS-SCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEE
T ss_pred             CCCCEEEecCcC-eEEeCCCeEEEEEEEEecCCCEEEEEEC-CEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEE
Confidence            568889988888 9999999999999999999999999999 666654 4555442   23  7999998  69999999


Q ss_pred             EEEecCcceEEEEEEEEEeecCCCCCCCCCCc
Q psy8771         174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAPL  205 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~  205 (904)
                      .|.|..|..+..+.|.|.       ..|.+|.
T Consensus        84 ~a~N~~g~~~~~~~l~V~-------~~~~~P~  108 (110)
T 2dm2_A           84 MAANPQGRISCTGRLMVQ-------AVNSGPS  108 (110)
T ss_dssp             EEECTTCCEEECCCEEEE-------CCSCCSS
T ss_pred             EEEECCCeEEEEEEEEEE-------CCCCCCC
Confidence            999999999999999998       6666664

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}

Probab=99.36  E-value=7.6e-12  Score=109.09  Aligned_cols=104  Identities=25%  Similarity=0.318  Sum_probs=79.2

Q ss_pred             ecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCcc-EEEEEEEEEEccCCCCccEEEEec---CcceEEecCCCCCc
Q psy8771         711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH-IVYYKLQFVETGRSDSEASIVTLK---NQTSFVLDELKKWT  786 (904)
Q Consensus       711 t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~-~~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t  786 (904)
                      +.+++|.. |.++.+...+.+ +.|+|++|  ...+|. +.+|.|+|+..+...+......+.   ..+.++|.+|++++
T Consensus         3 s~~~~P~~-P~~~~~~~~~~t-v~l~W~~P--~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t   78 (122)
T 2e3v_A            3 SGSSGPSS-PSIDQVEPYSST-AQVQFDEP--EATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPET   78 (122)
T ss_dssp             ---CCCCC-CEEEEEEECSSC-EEEEEECC--CCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTC
T ss_pred             CCCcCCcC-CCccEEEecCCc-EEEEECCC--CcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCC
Confidence            45567775 899999888877 99999999  456777 999999999887554422222222   67899999999999


Q ss_pred             eEEEEEEEeeCCCCCCCCCcEEeecCCC-CCCC
Q psy8771         787 EYRIWVLAGTSIGDGPSSYPITIRTHED-DPSE  818 (904)
Q Consensus       787 ~Y~~~V~a~~~~g~g~~s~~~~~~t~~~-~P~~  818 (904)
                      .|.|+|+|.|..|.|++|..+.++|.+. +|++
T Consensus        79 ~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~~P~~  111 (122)
T 2e3v_A           79 TYAVRLAALNGKGLGEISAASEFKTQPVREPSA  111 (122)
T ss_dssp             EEEEEEEEEETTEECCCCCCEEEECCCCCCCC-
T ss_pred             EEEEEEEEEeCCccCCCcccccccccCCCCCCC
Confidence            9999999999999999999999866543 4443

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}

Probab=99.36  E-value=2.7e-12  Score=122.98  Aligned_cols=167  Identities=19%  Similarity=0.246  Sum_probs=105.4

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC--CCCceee-cceEEEEeee--cCCeEEEEEEEec
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPV-GRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      +|.|...|.+ ..+.+|+++.|.|.+.|.|.+.+.|+++ +..+.  ...++.. .+++|.|.++  +|+|.|+|.+.|.
T Consensus         2 ~~~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~   79 (189)
T 2v5t_A            2 MLTFREVVSP-QEFKQGEDAEVVCRVSSSPAPAVSWLYH-NEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVE   79 (189)
T ss_dssp             CCEEEECCSS-EEEETTSCEEECCEEECSSCCEEEEEC------CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEET
T ss_pred             CceeeccCCC-EEEeCCCcEEEEEEEcCCCCCEEEEEEC-CccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEc
Confidence            6788888888 9999999999999999999999999999 55443  3445543 5778999999  6999999999998


Q ss_pred             CcceE--EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeeccee
Q psy8771         179 LGVIE--TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISGIIT  252 (904)
Q Consensus       179 ~g~~~--~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~~  252 (904)
                      .+...  ....+.+.  ..+....+..+...  .......+.|.+...+.+...  +.|...+.    ..... . ....
T Consensus        80 ~~~~~~~~~~~l~v~--~~p~~~~~~~~~~~--~~~~g~~v~l~C~~~g~p~~~--v~W~~~g~~~~~~~~~~-~-~~~~  151 (189)
T 2v5t_A           80 ARGEIDFRDIIVIVN--VPPAISMPQKSFNA--TAERGEEMTFSCRASGSPEPA--ISWFRNGKLIEENEKYI-L-KGSN  151 (189)
T ss_dssp             TTTEEEEEEEEEEEE--EEEEEECSCCEEEE--ETTSCCCEEEECEEEEESCCE--EEEEETTEECCCSSSEE-E-ETTT
T ss_pred             CCCceEEEEEEEEec--CCCCcccccccccc--cccCCCcEEEEEEEccCCCCe--EEEEECCEECcCCCcEE-E-ecCC
Confidence            86544  33444444  22211111111111  112234455555443222222  33333221    11111 1 1223


Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++...+.+.|+|.|.|..|...
T Consensus       152 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~  179 (189)
T 2v5t_A          152 TELTVRNIINSDGGPYVCRATNKAGEDE  179 (189)
T ss_dssp             TEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             CEEEEcCCChhhCeeEEEEEEeCCCcee
Confidence            6799999999999999999999988643

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.36  E-value=1.2e-11  Score=108.09  Aligned_cols=98  Identities=19%  Similarity=0.302  Sum_probs=79.1

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEEEcCCCCCCeEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      .+|.+|.++.+...+.+++.|+|.++.+.++.+.+|.|+|+....  ...|....   ....+.+.+.+|.|++.|.|+|
T Consensus        16 ~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~--~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~frV   93 (121)
T 1x4z_A           16 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKK--VGDWILATSAIPPSRLSVEITGLEKGISYKFRV   93 (121)
T ss_dssp             CCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSS--CCCCEEEEEEECTTCCEEEEESCCTTCEEEEEE
T ss_pred             CCCccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCC--CCceEEeecccCCCcCEEEECCCCCCCEEEEEE
Confidence            456899999999999999999999877666789999999998752  14455443   2467889999999999999999


Q ss_pred             EEEeCCCCCCCCCcEE-EecCCCC
Q psy8771         557 QAFTSVGPGPLSAPVL-VKTQQGV  579 (904)
Q Consensus       557 ~a~~~~g~~~~S~~~~-~~t~~~~  579 (904)
                      +|+|..|.|.+|.... +++....
T Consensus        94 ~A~n~~G~s~~S~~~~~v~~~~~~  117 (121)
T 1x4z_A           94 RALNMLGESEPSAPSRPYVVSGSG  117 (121)
T ss_dssp             EEEETTEECCCCCCCCCEECCSSC
T ss_pred             EEEcCCCcCCCcCCCCCEEcCCCC
Confidence            9999999998888764 5554433

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.35  E-value=8.6e-13  Score=110.34  Aligned_cols=92  Identities=16%  Similarity=0.204  Sum_probs=76.6

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      .+|.+|.+.. ..+++.|+|++|.  ..+++|++|.|+|+.. ...|......+. ..+.+++.+|.+++.|.|||.|.|
T Consensus         9 ~pP~~l~v~~-~~~sv~L~W~pP~--~~~~~I~gY~vey~~~-~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~n   84 (108)
T 1v5j_A            9 SPPRGLVAVR-TPRGVLLHWDPPE--LVPKRLDGYVLEGRQG-SQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFA   84 (108)
T ss_dssp             CCCEEEEEEE-CSSSEEEEEECCS--CCSSCCCBEEEEEEET-TCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEEEE
T ss_pred             CCCcceEEEE-eCCEEEEEECCCC--CCCCCCcEEEEEEEeC-CCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEEEEc
Confidence            5789999976 5678999999995  5788999999999983 333433223344 889999999999999999999999


Q ss_pred             CCCCCCCCCcEEeecCC
Q psy8771         797 SIGDGPSSYPITIRTHE  813 (904)
Q Consensus       797 ~~g~g~~s~~~~~~t~~  813 (904)
                      ..|.|.+|+.+.++|..
T Consensus        85 ~~G~s~pS~~~~v~T~~  101 (108)
T 1v5j_A           85 GSFVSDPSNTANVSTSG  101 (108)
T ss_dssp             TTEEEEECSCCCCCCSS
T ss_pred             CCCCcCCCCCEEEEeCC
Confidence            99999999999988864

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.35  E-value=3.3e-12  Score=111.98  Aligned_cols=110  Identities=16%  Similarity=0.160  Sum_probs=84.3

Q ss_pred             CCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCC
Q psy8771         568 SAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHS  647 (904)
Q Consensus       568 S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~  647 (904)
                      +..+...+....|.+|.++.+..++.+++.|+|.++.+                                         +
T Consensus         6 s~~~~~~~~~~~P~~P~~l~~~~~~~~sv~l~W~p~~~-----------------------------------------~   44 (124)
T 1wis_A            6 SGTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYD-----------------------------------------G   44 (124)
T ss_dssp             SCCCCSCCCCCCCCCCEEEEEESCCSSCEEEEEECCCC-----------------------------------------C
T ss_pred             cccccccCCCCCCccCCCCEEEEecCCEEEEEEECCCC-----------------------------------------C
Confidence            44444555667888899999988889999999987764                                         5


Q ss_pred             CCceeeEEEEEEeC---CccccceEE----ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCC-eeEEecCCCCCC
Q psy8771         648 GENIISYELYWNDT---YAKAKHHRR----IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYVPGA  718 (904)
Q Consensus       648 ~~~~~~y~v~~~~~---~~~~~~~~~----~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~-~~~~t~~~~p~~  718 (904)
                      ++.+.+|.|+|+..   ....+....    ......++|.+|.|++.|.|+|+|+|..|.|.+|.. ..++|.+.+|..
T Consensus        45 ~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~P~~  123 (124)
T 1wis_A           45 KTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPSS  123 (124)
T ss_dssp             SSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSSCCC
T ss_pred             CCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCCCCC
Confidence            66788888888873   333343322    245679999999999999999999999999999876 468888776653

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}

Probab=99.35  E-value=1.2e-11  Score=119.18  Aligned_cols=162  Identities=16%  Similarity=0.148  Sum_probs=109.9

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCC--Cceee---c--------ceEEEEeee--c
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPD--DKLPV---G--------RNVLTLDRV--T  166 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~--~~~~~---~--------~~~l~i~~l--~  166 (904)
                      .+|.|...|.+ +.+.+|+++.|.|.+. |.|.+.|.|+|+ +..+...  .++.+   .        .+.|.|.++  +
T Consensus         1 e~~~~~~~p~~-~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~   78 (195)
T 2c5d_C            1 EESPFVGNPGN-ITGARGLTGTLRCQLQVQGEPPEVHWLRD-GQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLS   78 (195)
T ss_dssp             -CCSEEECCCC-EEECTTCCEEEEEEEEEESSCCCCEEEET-TEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCST
T ss_pred             CCCeeccChhh-eEEecCCcEEEecccccCCCCcEEEEEEC-CEEcccCCCCceEEEEccccccceeeccEEEEEecccc
Confidence            36889999998 9999999999999999 999999999999 7666654  23332   1        468999999  6


Q ss_pred             CCeEEEEEEEecCcceEE-EEEEEEEeecCCCCCCC---CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCC
Q psy8771         167 ESENYTCIAASVLGVIET-STIVKVQCKYAPLLTLP---VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT  242 (904)
Q Consensus       167 d~g~Y~c~a~n~~g~~~~-~~~l~v~~~~~~~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~  242 (904)
                      |+|.|+|.|.|..|.... .+.|.|.       ..|   ..|.+..+..  ...+.|.+...+.+.. ..+.|...+...
T Consensus        79 d~G~Y~C~~~~~~~~~~~~~~~l~V~-------~~p~~~~~~~~~~~~~--g~~~~l~C~~~g~p~p-~~v~W~~~~~~~  148 (195)
T 2c5d_C           79 DTGQYQCLVFLGHQTFVSQPGYVGLE-------GLPYFLEEPEDRTVAA--NTPFNLSCQAQGPPEP-VDLLWLQDAVPL  148 (195)
T ss_dssp             TCEEEEEEEEETTEEEECCCEEEEEC-------CSCEEEECCCCEEECT--TCCEEEEEEEECSSCC-CEEEEEESSCBS
T ss_pred             CCcEEEEEEEeCCCceecccEEEEEe-------cCCeEEcCCCcEEEcC--CCEEEEEeECCCCCCC-CEEEEEECCEec
Confidence            999999999998877544 3777776       222   1333443333  3456666655433222 124444432211


Q ss_pred             CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         243 PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       243 ~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ... ........+.|.++.  +.+.|+|.|.|..|..
T Consensus       149 ~~~-~~~~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~  182 (195)
T 2c5d_C          149 ATA-PGHGPQRSLHVPGLN--KTSSFSCEAHNAKGVT  182 (195)
T ss_dssp             SSS-TTSSCCEEEEECCCS--SCEEEEEEEEETTEEE
T ss_pred             cCC-CCcCCCCeEEEcccc--cCceEEEEEEcCCCce
Confidence            100 000244679999988  5799999999998865

>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}

Probab=99.35  E-value=3.7e-12  Score=105.68  Aligned_cols=86  Identities=19%  Similarity=0.290  Sum_probs=77.0

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      ..||.|...|.. +.+.+|+.+.|.|.+.|.| |.|.|+|+ +..+..+.++.+.++.|.|.++  +|+|.|+|.|.|..
T Consensus         7 ~~pp~~~~~~~~-~~v~~G~~v~l~C~~~g~p-p~i~W~k~-g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~   83 (95)
T 2ckn_A            7 AQPWGVPVEVES-LLVHPGDLLQLRCRLRDDV-QSINWLRD-GVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPS   83 (95)
T ss_dssp             SCSCCBTTBBCC-EEECTTSCEEEECCEESSC-CEEEEEBT-TBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETT
T ss_pred             CCCCEEEcCcce-EEEcCCCeEEEEEECCCCC-CceEEEEC-CEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCC
Confidence            567888888888 9999999999999999998 89999998 7778777788888899999999  69999999999999


Q ss_pred             cceEEEEEEEE
Q psy8771         180 GVIETSTIVKV  190 (904)
Q Consensus       180 g~~~~~~~l~v  190 (904)
                      |..+..+.|.|
T Consensus        84 g~~~~~~~l~V   94 (95)
T 2ckn_A           84 GSDTTYFSVNV   94 (95)
T ss_dssp             EEEEEEEEEEE
T ss_pred             CcEEEEEEEEE
Confidence            99888877766

>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4

Probab=99.35  E-value=4.4e-12  Score=106.42  Aligned_cols=88  Identities=19%  Similarity=0.259  Sum_probs=76.3

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----cceEEEEeee--cCCeEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ..||.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++..     +...|.|.++  +|+|.|+|.
T Consensus         3 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~   80 (99)
T 1g1c_A            3 MEAPKIFERIQS-QTVGQGSDAHFRVRVVGKPDPECEWYKN-GVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVK   80 (99)
T ss_dssp             CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred             CCCCceEecCcc-eEEcCCCcEEEEEEEEEeCCCEEEEEEC-CEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEE
Confidence            457889888888 9999999999999999999999999999 777766555442     3347999999  699999999


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.|..|.....+.|.|.
T Consensus        81 a~N~~g~~~~~~~l~V~   97 (99)
T 1g1c_A           81 AINIAGETSSHAFLLVQ   97 (99)
T ss_dssp             EEETTEEEEEEEEEEEE
T ss_pred             EEECCCcEEEEEEEEEe
Confidence            99999999999999887

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}

Probab=99.35  E-value=3.6e-12  Score=133.74  Aligned_cols=240  Identities=11%  Similarity=0.059  Sum_probs=139.2

Q ss_pred             eeCCCCCCCCcEEEeccC-CceEEEEeCCCCC----------C--CceecccccccccceEEEEeeeccCCeeeeeeeec
Q psy8771          30 VTEPGTAPRDVQVRPLSS-STMVIQWDEPETP----------N--GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQV   96 (904)
Q Consensus        30 ~~~p~~~p~~l~~~~~~~-~s~~v~W~~~~~~----------~--g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v   96 (904)
                      .....+....|.|...+. +.+.|.|.+....          +  +.+........+.....|...+..........+.+
T Consensus        16 ~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v   95 (317)
T 2y25_A           16 WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD   95 (317)
T ss_dssp             EEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCST
T ss_pred             EEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEE
Confidence            333344666777775555 6789999765211          1  12333334444555555555443333333333332


Q ss_pred             cCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc----------CCCCeEEEeeCCccccCCCCceeec----ceEEEE
Q psy8771          97 ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG----------SPMPFVKWRKGQNIELTPDDKLPVG----RNVLTL  162 (904)
Q Consensus        97 ~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g----------~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i  162 (904)
                           ..+|.+...+.+ ..+..|+.+.|.|.+.|          .|.+.|.|+++ +..+....++...    ...|.|
T Consensus        96 -----~~~~~~~~~~~~-~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~L~i  168 (317)
T 2y25_A           96 -----EAFKELMMEVCK-KIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHN-GSAIRYSDRVKTGVTGEQIWLQI  168 (317)
T ss_dssp             -----HHHHHHHHHHHH-HHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEES-SSBCCCCSSEEEEECSSEEEEEE
T ss_pred             -----ecCccccccCCc-eecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEEC-CEECCCCCCeEEeccCCEEEEEE
Confidence                 223333333334 56678888888888888          79999999999 7777766666542    245999


Q ss_pred             eee--cCCeEEEEEEEecCcceEEEEEEEEEee-----------cCCCCCC--C----CCCcceEEEeecCCeEEEEEeC
Q psy8771         163 DRV--TESENYTCIAASVLGVIETSTIVKVQCK-----------YAPLLTL--P----VAPLDVKISEVTATSVRLDWTY  223 (904)
Q Consensus       163 ~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~-----------~~~~~~~--P----~~p~~l~~~~~~~~sv~l~W~~  223 (904)
                      .++  +|+|.|+|.|.|..|.......|.+...           .......  |    ..|..+.+....  .+.|.+..
T Consensus       169 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~--~~~l~C~~  246 (317)
T 2y25_A          169 NEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGK--ALNLTCNV  246 (317)
T ss_dssp             ESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTS--BBCEEEEE
T ss_pred             CcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCC--EEEEEEEE
Confidence            999  6999999999999998887777765310           0000000  0    123333343333  33343333


Q ss_pred             CCccceEEEEEEEeCCC----CCCeEEeec-ceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         224 PSETLLYYVIQYKPKAA----NTPYSEISG-IITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       224 ~~~~~~~y~v~~~~~~~----~~~~~~~~~-~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      .+.+...  +.|...+.    ...+..... .....+.|.++...+.+.|+|.|.|..|...
T Consensus       247 ~g~p~p~--i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~  306 (317)
T 2y25_A          247 WGDPPPE--VSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSET  306 (317)
T ss_dssp             ECSSCCE--EEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEE
T ss_pred             ecCCCCE--EEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEE
Confidence            2222222  44443321    122222221 3335899999999999999999999988653

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.35  E-value=1.1e-12  Score=111.17  Aligned_cols=99  Identities=32%  Similarity=0.476  Sum_probs=83.7

Q ss_pred             ecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEE
Q psy8771         711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYR  789 (904)
Q Consensus       711 t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~  789 (904)
                      |.+..|+.+|.++.+...+.+++.|+|++|.....+|.+.+|.|+|+..+...    ...+. ..+.+.|.+|+|++.|.
T Consensus         3 t~e~~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~----~~~~~~~~~~~~i~~L~p~t~Y~   78 (103)
T 2edy_A            3 SGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQ----ELQNITTDTRFTLTGLKPDTTYD   78 (103)
T ss_dssp             TTCCCCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCC----EEEEEESSSCCEECSCCTTCCEE
T ss_pred             CCCCCCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCc----cEEEcCCcceEEEcCCCCCCEEE
Confidence            45666777899999999999999999999964467889999999999876532    23333 78899999999999999


Q ss_pred             EEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         790 IWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       790 ~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      |+|+|.|..|.|++|..+.++|.+
T Consensus        79 ~~V~A~n~~G~g~~S~~~~~~T~p  102 (103)
T 2edy_A           79 IKVRAWTSKGSGPLSPSIQSRTMP  102 (103)
T ss_dssp             EECCEECSSCBCCCCCCCCCCCCC
T ss_pred             EEEEEECCCCCCCCCCCEEEEecc
Confidence            999999999999999999988854

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.35  E-value=3.8e-12  Score=108.50  Aligned_cols=102  Identities=23%  Similarity=0.387  Sum_probs=83.4

Q ss_pred             ecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEE
Q psy8771         711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYR  789 (904)
Q Consensus       711 t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~  789 (904)
                      |.+.+|..| . +.+...+.+++.|+|++|.  ..+|.+.+|.|+|+..+...+  ....+. ..+.++|.+|.|++.|.
T Consensus         3 T~~~~P~~p-~-~~v~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~   76 (107)
T 2dn7_A            3 SGSSGPGRP-T-MMISTTAMNTALLQWHPPK--ELPGELLGYRLQYCRADEARP--NTIDFGKDDQHFTVTGLHKGTTYI   76 (107)
T ss_dssp             TCCCCCCCC-E-EEEEECSTTEEEEEEECCS--SCSSCCCEEEEEEEETTCSSC--EEEEEETTCCEEEEECCCTTCEEE
T ss_pred             CCCCCCCCC-c-EeEEecCCCEEEEEECCCC--CCCCceeEEEEEEEECCCCCC--EEEEeCCCccEEEeCCCCCCCEEE
Confidence            566677754 4 6777779999999999984  678899999999998765433  333444 78899999999999999


Q ss_pred             EEEEEeeCCCCCCCCCcEEeecCCCCCCCC
Q psy8771         790 IWVLAGTSIGDGPSSYPITIRTHEDDPSEV  819 (904)
Q Consensus       790 ~~V~a~~~~g~g~~s~~~~~~t~~~~P~~v  819 (904)
                      |+|+|.|..|.|.+|. ..+.|..+.|+++
T Consensus        77 ~~V~A~n~~G~g~~s~-~~~~T~~~~P~~p  105 (107)
T 2dn7_A           77 FRLAAKNRAGLGEEFE-KEIRTPEDLSGPS  105 (107)
T ss_dssp             EEEEEEETTEEEEEEE-EEEECCCCCCCCC
T ss_pred             EEEEEEcCCcccCCee-eEEeCCCCCCCCC
Confidence            9999999999999988 6788888888654

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.34  E-value=5.3e-12  Score=108.49  Aligned_cols=103  Identities=22%  Similarity=0.341  Sum_probs=83.2

Q ss_pred             EEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCce
Q psy8771         572 LVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENI  651 (904)
Q Consensus       572 ~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~  651 (904)
                      .++|....|.+|.++.+...+.+++.|+|.++..                                         .++.+
T Consensus         3 ~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~-----------------------------------------~~g~i   41 (111)
T 1x5l_A            3 SGSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQ-----------------------------------------PNGII   41 (111)
T ss_dssp             CCCCSCCCCCCCCCEECSCBCSSCEEEEECCCSC-----------------------------------------CCSCC
T ss_pred             eEEcCCCCCCCCceEEEEEcCCCEEEEEECCCCC-----------------------------------------CCCEE
Confidence            3566777888888888888888889999988865                                         56678


Q ss_pred             eeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCC
Q psy8771         652 ISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYV  715 (904)
Q Consensus       652 ~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~  715 (904)
                      .+|.|+|+..+.... ..........+.|.+|.|++.|.|+|+|+|..|.|.+|..+.++|....
T Consensus        42 ~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~  106 (111)
T 1x5l_A           42 LEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPS  106 (111)
T ss_dssp             CEEEEEEEESSSCCSSCEEEEESSSEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTT
T ss_pred             EEEEEEEEECCCCceeEEEecCCCCEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCC
Confidence            889998887764333 3344556789999999999999999999999999999999999987653

>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}

Probab=99.34  E-value=3.9e-12  Score=133.52  Aligned_cols=165  Identities=12%  Similarity=0.167  Sum_probs=105.9

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ..+|.|..++ + +.+.+|+.+.|.|.+.|. |.+.|.|+|+ +..+....++..  +...|.|.++  +|+|.|+|.|.
T Consensus         5 ~~~P~~~~~~-~-~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~   81 (317)
T 2y25_A            5 FTGPHFVEYL-S-WEVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILK   81 (317)
T ss_dssp             SSCCEEEEEE-E-EEEETTTEEEEEEEEESCCTTCEEEEEET-TEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEE
T ss_pred             cCCCcEeeee-e-EEECCCCeEEEEEEEcCCCCCCEEEEEEC-CeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEE
Confidence            4688888554 5 999999999999999998 8899999999 777766555543  4569999998  69999999999


Q ss_pred             ecCcceEEEEEEEEEeecC------CCCCCCCCCcceEEEeec----------CCeEEEEEeCCCccceEEEEEEEeCCC
Q psy8771         177 SVLGVIETSTIVKVQCKYA------PLLTLPVAPLDVKISEVT----------ATSVRLDWTYPSETLLYYVIQYKPKAA  240 (904)
Q Consensus       177 n~~g~~~~~~~l~v~~~~~------~~~~~P~~p~~l~~~~~~----------~~sv~l~W~~~~~~~~~y~v~~~~~~~  240 (904)
                      |..|.......|.|.....      ......+.+..+.+...+          .....+.|...+..+.          .
T Consensus        82 n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~----------~  151 (317)
T 2y25_A           82 DDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIR----------Y  151 (317)
T ss_dssp             SSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCC----------C
T ss_pred             CCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECC----------C
Confidence            9999876665555441000      000011223333332221          1223334433221111          1


Q ss_pred             CCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         241 NTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       241 ~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+..........+.|.++...+.+.|+|.|.|..|..
T Consensus       152 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~  190 (317)
T 2y25_A          152 SDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGH  190 (317)
T ss_dssp             CSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred             CCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceE
Confidence            122222233334669999999999999999999987753

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=7.8e-12  Score=108.76  Aligned_cols=108  Identities=19%  Similarity=0.351  Sum_probs=84.6

Q ss_pred             CCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee--cCceEEE
Q psy8771         465 EGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV--DNNQLTT  542 (904)
Q Consensus       465 ~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~  542 (904)
                      .+..+....+.|....| .+|.++.+...+.+++.|+|++|... |.+.+|.|+|+....   ..|.....  ...+.+.
T Consensus         2 ss~~~~~~~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~~~-g~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~~   76 (118)
T 2yrz_A            2 SSGSSGSHDSRLTAGVP-DTPTRLVFSALGPTSLRVSWQEPRCE-RPLQGYSVEYQLLNG---GELHRLNIPNPAQTSVV   76 (118)
T ss_dssp             CCCCCSCCTTSSSCSCC-CCCCCCEECCCBTTEEEEECCCCCCS-SCEEEEEEEEEBSSS---CCEEEEEESCTTCCEEE
T ss_pred             CCCCCCcceeecCCCCC-CCCCceEEEeCCCCEEEEEeCCCCCC-CCccEEEEEEEECCC---CceEEEEcCCCCcCEEE
Confidence            34445556677777666 78899999999999999999998765 689999999998754   33444433  4578899


Q ss_pred             EcCCCCCCeEEEEEEEEeCCCCCCCCC-cEEEecCC
Q psy8771         543 ISDLTPHTIYTIRVQAFTSVGPGPLSA-PVLVKTQQ  577 (904)
Q Consensus       543 ~~~L~p~t~Y~~~V~a~~~~g~~~~S~-~~~~~t~~  577 (904)
                      |.+|.|++.|.|+|+|.|..|.|.+|. .+.+.+..
T Consensus        77 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~  112 (118)
T 2yrz_A           77 VEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV  112 (118)
T ss_dssp             EESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred             eCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence            999999999999999999999998887 34444433

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=6.5e-12  Score=108.33  Aligned_cols=105  Identities=21%  Similarity=0.314  Sum_probs=83.7

Q ss_pred             CeeEEecC-CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCC
Q psy8771         706 PIPVRTKQ-YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELK  783 (904)
Q Consensus       706 ~~~~~t~~-~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~  783 (904)
                      .+...|.+ .+|. +|.+|++...+ +++.|+|++|.  ..||.+.+|.|+|+....  + .....+. ..+.++|.+|+
T Consensus         7 t~~~~t~e~~~P~-~P~~l~~~~~~-~sv~l~W~~P~--~~ng~i~gY~i~y~~~~~--~-~~~~~~~~~~~~~~l~~L~   79 (116)
T 2edb_A            7 GPENDLDESQVPD-QPSSLHVRPQT-NCIIMSWTPPL--NPNIVVRGYIIGYGVGSP--Y-AETVRVDSKQRYYSIERLE   79 (116)
T ss_dssp             SSSSSCBCSSCCC-CCSCEEEEECS-SCEEEEECCCS--CTTBCCCEEEEEEEESST--T-SEEEEEETTCCEEEECSCC
T ss_pred             cccccCCCCCCCC-CCCCeEEEECC-CEEEEEEcCCC--CCCCceeEEEEEEEeCCC--C-eEEEEeCCCeeEEEeCCCC
Confidence            34555666 6676 78999999988 99999999994  568999999999986332  2 2233444 88999999999


Q ss_pred             CCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCCC
Q psy8771         784 KWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE  818 (904)
Q Consensus       784 p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~~  818 (904)
                      +++.|.|+|+|.|..|.|+.+. ..++|..++|.+
T Consensus        80 p~t~Y~~~V~A~n~~G~g~~~~-~~~~T~~~~P~p  113 (116)
T 2edb_A           80 SSSHYVISLKAFNNAGEGVPLY-ESATTRSITSGP  113 (116)
T ss_dssp             SSSBEEEEEEEEETTEECSCEE-ECCBCCCSSSCS
T ss_pred             CCCEEEEEEEEEeCCccCCCCc-ceeecccCCCCC
Confidence            9999999999999999998654 568888877754

>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*

Probab=99.34  E-value=6.3e-12  Score=133.88  Aligned_cols=233  Identities=10%  Similarity=0.072  Sum_probs=113.8

Q ss_pred             CceEEEEeCCCCC-------------------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEE
Q psy8771          48 STMVIQWDEPETP-------------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFS  108 (904)
Q Consensus        48 ~s~~v~W~~~~~~-------------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~  108 (904)
                      +.+.|.|.+....                   ++.+........|.....|...+........+.+.|.......++.+ 
T Consensus        46 ~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~-  124 (349)
T 4dep_C           46 AGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPM-  124 (349)
T ss_dssp             TTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSC-
T ss_pred             CCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCccc-
Confidence            3488999765421                   22333333444455555555554433333444555543222222211 


Q ss_pred             cCCCCceEEecCCCeEEEEEE-----ccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC-c
Q psy8771         109 IPPPALLEVMLDSPLNLSCVA-----VGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL-G  180 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~-----~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~-g  180 (904)
                      ..+.. ..+.+|+.+.|.|.+     .|.|.+.|+|+|+ +..+....++...+..|.|.++  +|+|.|+|.|.|.. |
T Consensus       125 ~~~~~-~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~-~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g  202 (349)
T 4dep_C          125 KLPVH-KLYIEYGIQRITCPNVDGYFPSSVKPTITWYMG-CYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENG  202 (349)
T ss_dssp             CCCEE-EEETTCSEEEEECCSCTTSSCTTSCCEEEEEET-TEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETT
T ss_pred             ccCcc-eeeecCccEEEEcCCCcccccCCCCceEEEeeC-CEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCC
Confidence            22334 688899999999986     8899999999999 7777666666667778999999  69999999999987 4


Q ss_pred             ce---EEEEEEEEEeec----CCCCCCCCCCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCe-----E-
Q psy8771         181 VI---ETSTIVKVQCKY----APLLTLPVAPLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPY-----S-  245 (904)
Q Consensus       181 ~~---~~~~~l~v~~~~----~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~-----~-  245 (904)
                      ..   +....|.|....    .|.+..|.....+.+.....-.+.|.-...  +.+..  .+.|...+.....     . 
T Consensus       203 ~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p--~v~W~~~g~~l~~~~~~~~~  280 (349)
T 4dep_C          203 RTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRN--EVWWTIDGKKPDDITIDVTI  280 (349)
T ss_dssp             EEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCC--EEEEESSCC--------CCC
T ss_pred             EEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCC--EEEEEECCEEccccCCcccc
Confidence            43   455555555211    111111111110122222222222322211  11111  2233222111000     0 


Q ss_pred             ---Ee----e-cceeceEEEcCCCCCCe-EEEEEEEEcCCCCCCCCCCe
Q psy8771         246 ---EI----S-GIITTYYTVRNLSPYTE-YEFYIIAVNNLGRGPPSSPA  285 (904)
Q Consensus       246 ---~~----~-~~~~~~~~i~~L~p~~~-Y~~~v~a~n~~g~s~~s~~~  285 (904)
                         ..    . ......+.|.++...+. +.|+|.|.|..|....+..+
T Consensus       281 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l  329 (349)
T 4dep_C          281 NESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKV  329 (349)
T ss_dssp             CEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-
T ss_pred             ccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEE
Confidence               00    0 01134589999999999 99999999999875443333

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.34  E-value=6e-12  Score=107.57  Aligned_cols=98  Identities=18%  Similarity=0.292  Sum_probs=81.4

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCcee----eEEEEEEeCCccccce-EEecccceEEEeCCCCCcEEEEEEEE
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENII----SYELYWNDTYAKAKHH-RRIGLVETYSLTGLYPNTLYYIWLAA  694 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~----~y~v~~~~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Y~v~V~a  694 (904)
                      .+.+|.+|++..++.+++.|+|.++...++.+.    +|.|+|+......... ......++++|.||+|+|.|.|+|+|
T Consensus         8 pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~i~gL~P~T~Y~f~V~A   87 (113)
T 1x5j_A            8 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMV   87 (113)
T ss_dssp             CCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECCBCSSEEEEESCCTTCEECCEEEE
T ss_pred             CCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEEEEecCcCEEEeCCCCCCcEEEEEEEE
Confidence            467899999999999999999999876555544    9999998743322222 22345679999999999999999999


Q ss_pred             EcCCCCCCCCCCeeEEecCC-CCC
Q psy8771         695 QSPRGEGATTPPIPVRTKQY-VPG  717 (904)
Q Consensus       695 ~~~~G~~~~s~~~~~~t~~~-~p~  717 (904)
                      ++..|.|.+|..+.++|.+. +|.
T Consensus        88 ~~~~G~g~~S~~v~~~T~~~~~Ps  111 (113)
T 1x5j_A           88 TKGRRSSTWSMTAHGTTFELSGPS  111 (113)
T ss_dssp             ECSSCBCCCCCCCCEECCCSSCCC
T ss_pred             ecCCccCCCcccEEeeccCCCCCC
Confidence            99999999999999999988 776

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}

Probab=99.34  E-value=1.8e-12  Score=124.76  Aligned_cols=184  Identities=11%  Similarity=0.068  Sum_probs=111.1

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE---EecccceEEEeC--CCCCcEEEEEEEEE
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR---RIGLVETYSLTG--LYPNTLYYIWLAAQ  695 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~---~~~~~~~~~l~~--L~p~t~Y~v~V~a~  695 (904)
                      .++|++|++...+...+ |+|.++....+....|.|+|...+...|...   .....+.+.|..  |.+...|.++|+|.
T Consensus         8 lp~P~nv~~~s~n~~~i-L~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~A~   86 (211)
T 3g9v_A            8 SLKPQRVQFQSRNFHNI-LQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAA   86 (211)
T ss_dssp             -CCCEEEEEEEETTEEE-EEEECCCC---CCCEEEEEEEETTCSSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEEEE
T ss_pred             CCCCceeEEEEEcCceE-EEECCCCCCCCCCeEEEEEEEECCCCceEECccCCCCCCCEECCCCcccccCccEEEEEEEE
Confidence            46799999977777765 9999987656667889999998865555422   233446777754  57899999999999


Q ss_pred             cCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCC--CCCcc--------EEEEEEEEEEccCCCCc
Q psy8771         696 SPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVE--RSNGH--------IVYYKLQFVETGRSDSE  765 (904)
Q Consensus       696 ~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~--~~~g~--------~~~Y~v~~~~~~~~~~~  765 (904)
                      ++.|.|.++....|.+.......||. +.+... .++|.|.|.+|...  ..+|.        ...|.|.|...+.... 
T Consensus        87 ~~~~~S~ws~~~~f~~~~~t~i~PP~-v~v~~~-~~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~~~-  163 (211)
T 3g9v_A           87 SAGSYSEWSMTPRFTPWWETKIDPPV-MNITQV-NGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKE-  163 (211)
T ss_dssp             ETTEECCCEECCCBCHHHHCBCCCCE-EECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC------C-
T ss_pred             CCCCcCCCEecCcccccccCccCCCE-EEEEEc-CCEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCccE-
Confidence            99888888766666654333444664 777665 45999999999531  13442        3679999987654321 


Q ss_pred             cEEEEec-CcceEEecCCCCCceEEEEEEEeeC--CCCCCCCCcEEee
Q psy8771         766 ASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS--IGDGPSSYPITIR  810 (904)
Q Consensus       766 ~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~--~g~g~~s~~~~~~  810 (904)
                        ..... ....+.|.+|+|++.|.|+|+|...  ...|.+|....+.
T Consensus       164 --~~~~~~~~~~~~i~~L~p~t~Ycv~V~a~~~~~~~~s~~S~~~C~~  209 (211)
T 3g9v_A          164 --QKVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSEERCVE  209 (211)
T ss_dssp             --EEEEEESSCCCC----------CEEEEEEETTTTEECCCCCC----
T ss_pred             --EEEEecCCcEEEEecCCCCCeEEEEEEEEeCCCCCcCCCCCCEeEC
Confidence              22223 6788999999999999999999864  2356677655543

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.33  E-value=1.9e-11  Score=104.02  Aligned_cols=100  Identities=42%  Similarity=0.782  Sum_probs=85.9

Q ss_pred             CCCCCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         199 TLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       199 ~~P~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      ..|.+|.++++...+.+++.|+|.++ ++.+.+|.|+|+.......+..+.......+.|.+|+|++.|.|+|+|.|..|
T Consensus         6 ~~P~~P~~~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   85 (106)
T 2dju_A            6 SGPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIG   85 (106)
T ss_dssp             CSCCCCEEEEEEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCCCCSSEEEEESCCTTCEEEEEEEEECSSC
T ss_pred             cCCcCCCCcEEEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccCCCccEEEEeCCCCCcEEEEEEEEEeCCc
Confidence            68899999999999999999999988 57899999999987655556555555668899999999999999999999999


Q ss_pred             CCCCCCCeEEecCCCCCCCCC
Q psy8771         278 RGPPSSPAVITTGETEPGTAP  298 (904)
Q Consensus       278 ~s~~s~~~~~~t~~~~p~~~p  298 (904)
                      .+.++..+.+.+.+..|..||
T Consensus        86 ~~~~S~~~~~~T~~~~P~~Pp  106 (106)
T 2dju_A           86 RGPPSEAVRARTGEQSGPSSG  106 (106)
T ss_dssp             BCCCCCCEEEECCCSSCCCCC
T ss_pred             cCCCcccEEeEcCCCCCCCCC
Confidence            999999999988877665443

>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A

Probab=99.33  E-value=2.6e-11  Score=125.32  Aligned_cols=248  Identities=15%  Similarity=0.145  Sum_probs=142.1

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccCC-CCceee-----cceEEEEeee--cCCeEEEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELTP-DDKLPV-----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~~-~~~~~~-----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ||.|...|.+ ..+.+|+.+.|.|.+.|.| .+.|.|+|++|..+.. ..++.+     ....|.|.++  +|+|.|+|.
T Consensus         2 ~~~v~~~p~~-~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~   80 (291)
T 1qz1_A            2 VLQVDIVPSQ-GEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV   80 (291)
T ss_dssp             CCCEEEESSS-EEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred             CcceEecCCC-ceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEE
Confidence            5678888888 8999999999999999987 6899999932665543 344443     3568999998  699999999


Q ss_pred             EEecCcc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCC----eEEeec
Q psy8771         175 AASVLGV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTP----YSEISG  249 (904)
Q Consensus       175 a~n~~g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~----~~~~~~  249 (904)
                      |.|..|. .+....|.|.  ..+..  ...|....+..  ...+.|.+...+.+..  .+.|...+....    ..... 
T Consensus        81 ~~n~~g~~~~~~~~l~v~--~~~~~--~~~~~~~~~~~--g~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~-  151 (291)
T 1qz1_A           81 VTAEDGTQSEATVNVKIF--QKLMF--KNAPTPQEFKE--GEDAVIVCDVVSSLPP--TIIWKHKGRDVILKKDVRFIV-  151 (291)
T ss_dssp             EECTTSCEEEEEEEEEEE--CCSEE--EECCSSEEEET--TSCEEECCEEECSSCC--EEEEEETTSCSSTTCCTTEEE-
T ss_pred             EEcCCCCeeEEEEEEEee--ccccc--cCCCCcccccC--CCeEEEEEEeccCCCC--EEEEEECCEEcccCCCceEEE-
Confidence            9999864 4556666665  11111  12334444433  3345555544322222  244544332210    01111 


Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeE--EecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeE
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAV--ITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA  327 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~--~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~  327 (904)
                      .....+.|.++...+.+.|+|.|.|..+....+..+.  +...+. ....+............+.|.+.....+...+.+
T Consensus       152 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W  230 (291)
T 1qz1_A          152 LSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPT-VQARQSIVNATANLGQSVTLVCDADGFPEPTMSW  230 (291)
T ss_dssp             CTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEE-EEESCSEEEEETTSCCCEEEEEEEEEESCCEEEE
T ss_pred             ccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCc-ccccccccccccccCceEEEEEEEEEeCCCcEEE
Confidence            1235799999999999999999998754321111111  111110 0000111111222234455555433222223333


Q ss_pred             EEE--------------EeeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         328 KHH--------------RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       328 ~~~--------------~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                      +..              ........+.|..+.....-.+++.|.|..|.
T Consensus       231 ~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~  279 (291)
T 1qz1_A          231 TKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGE  279 (291)
T ss_dssp             EETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred             EECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCc
Confidence            221              01112346788888888888888899887764

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=99.33  E-value=5.1e-12  Score=133.67  Aligned_cols=246  Identities=18%  Similarity=0.251  Sum_probs=114.9

Q ss_pred             CCCCcEEEeccC-CceEEEEeCCCCC----------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCC---
Q psy8771          36 APRDVQVRPLSS-STMVIQWDEPETP----------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVR---  101 (904)
Q Consensus        36 ~p~~l~~~~~~~-~s~~v~W~~~~~~----------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~---  101 (904)
                      ....|.|...+. +...|.|.+....          ++.+........|.....|...+. ......+.+.|.....   
T Consensus        24 ~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~  102 (334)
T 1ry7_B           24 DAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDAPSSGD  102 (334)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEeccCcccc
Confidence            455666665554 4678999875321          222333333333444444444443 2222333444432211   


Q ss_pred             --------------CCCCeEEcCCC---CceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCce-----eecceE
Q psy8771         102 --------------RVPPQFSIPPP---ALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKL-----PVGRNV  159 (904)
Q Consensus       102 --------------~~~P~~~~~~~---~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~-----~~~~~~  159 (904)
                                    ..+|.|..+..   ....+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+....++     ......
T Consensus       103 ~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~  181 (334)
T 1ry7_B          103 DEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKN-GREFRGEHRIGGIKLRHQQWS  181 (334)
T ss_dssp             ----------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBT-TBCCCTTSSTTCCCCCTTTTE
T ss_pred             ccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEEC-CEECcccccccceecccceEE
Confidence                          13566554321   226788999999999999999999999999 6666554332     224568


Q ss_pred             EEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCC-CCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEE
Q psy8771         160 LTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAP-LLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYK  236 (904)
Q Consensus       160 l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~-~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~  236 (904)
                      |.|.++  +|+|.|+|.|.|..|.....+.|.|...... .......|.+..+.  ....++|.+...+.+..  .+.|.
T Consensus       182 L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~--~G~~v~l~C~~~g~p~p--~v~W~  257 (334)
T 1ry7_B          182 LVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAV--LGSDVEFHCKVYSDAQP--HIQWL  257 (334)
T ss_dssp             EEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEE--SSCCEEECCCCBCSSCE--EEEEE
T ss_pred             EEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEe--CCCCEEEEEEEecCCCC--eEEEE
Confidence            999999  6999999999999999888888888732110 00001123344333  33456676665433333  34443


Q ss_pred             e----CCC----CCC--eEEee-------cceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEE
Q psy8771         237 P----KAA----NTP--YSEIS-------GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVI  287 (904)
Q Consensus       237 ~----~~~----~~~--~~~~~-------~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~  287 (904)
                      .    .+.    ...  .....       ......+.|.++...+.+.|+|.|.|..|....+..+.+
T Consensus       258 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V  325 (334)
T 1ry7_B          258 KHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVV  325 (334)
T ss_dssp             ECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEE
T ss_pred             ECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEE
Confidence            3    110    000  00000       011237999999999999999999999997644333333

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}

Probab=99.33  E-value=3.1e-12  Score=122.99  Aligned_cols=184  Identities=14%  Similarity=0.176  Sum_probs=107.1

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEEEcC--CCCCCeEEEEEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTTISD--LTPHTIYTIRVQ  557 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--L~p~t~Y~~~V~  557 (904)
                      .+|.++++...+...+ |+|+++....+....|.|+|+..+.   ..|....   ....+.+.|+.  +.+...|.++|+
T Consensus         9 p~P~nv~~~s~n~~~i-L~W~p~~~~~~~~~~Y~Vqy~~~~~---~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~   84 (211)
T 3g9v_A            9 LKPQRVQFQSRNFHNI-LQWQPGRALTGNSSVYFVQYKIYGQ---RQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVR   84 (211)
T ss_dssp             CCCEEEEEEEETTEEE-EEEECCCC---CCCEEEEEEEETTC---SSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEE
T ss_pred             CCCceeEEEEEcCceE-EEECCCCCCCCCCeEEEEEEEECCC---CceEECccCCCCCCCEECCCCcccccCccEEEEEE
Confidence            3589999988886665 9999987655556789999998752   4566432   24556788864  578999999999


Q ss_pred             EEeCCCCCCCCCcEEEecC-CCCCCCCCCceEEecCCCeEEEEEeCCCC----CCCCceEEEEEeccCCCCCcceEEEee
Q psy8771         558 AFTSVGPGPLSAPVLVKTQ-QGVPSQPRDLRAVDIQETAVTLAWSKPTH----SGENIISYELYWNDTYAKPRDLRAVDI  632 (904)
Q Consensus       558 a~~~~g~~~~S~~~~~~t~-~~~p~~p~~~~~~~~~~~~~~l~W~~~~~----~~~~~~~y~v~~~~~~~~p~~l~~~~~  632 (904)
                      |.++.+.+.++....|.+. ...+.+| .+.+...+ ++|.|.|.+|..    .+|..                      
T Consensus        85 A~~~~~~S~ws~~~~f~~~~~t~i~PP-~v~v~~~~-~si~V~~~~P~~~~~~~ng~~----------------------  140 (211)
T 3g9v_A           85 AASAGSYSEWSMTPRFTPWWETKIDPP-VMNITQVN-GSLLVILHAPNLPYRYQKEKN----------------------  140 (211)
T ss_dssp             EEETTEECCCEECCCBCHHHHCBCCCC-EEECC------CCCEEECCCCGGGGCSSCS----------------------
T ss_pred             EECCCCcCCCEecCcccccccCccCCC-EEEEEEcC-CEEEEEEECCCCccccCCCce----------------------
Confidence            9999888888765555542 2344555 48777654 589999999864    11100                      


Q ss_pred             ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCC--CCCCCCC
Q psy8771         633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR--GEGATTP  705 (904)
Q Consensus       633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~--G~~~~s~  705 (904)
                              |..   ..-....|+|.|+..+..............+.|.+|+|++.|.|+|+|+...  ..|.+|.
T Consensus       141 --------~~~---~~~~~l~Y~v~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Ycv~V~a~~~~~~~~s~~S~  204 (211)
T 3g9v_A          141 --------VSI---EDYYELLYRVFIINNSLEKEQKVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSE  204 (211)
T ss_dssp             --------SCH---HHHTTCEEEEEEC------CEEEEEESSCCCC----------CEEEEEEETTTTEECCCCC
T ss_pred             --------eee---hhcceeEEEEEEEECCCccEEEEEecCCcEEEEecCCCCCeEEEEEEEEeCCCCCcCCCCC
Confidence                    000   0001366999988765544333334456788999999999999999999642  2344554

>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}

Probab=99.33  E-value=3.5e-10  Score=127.71  Aligned_cols=235  Identities=13%  Similarity=0.143  Sum_probs=131.8

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC-----------------CC-----------ceecccccccccceEEEEeeeccCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP-----------------NG-----------QITHPPTRAARSHARLAAQSVLRRG   87 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~-----------------~g-----------~i~~~~~~~~~~~~~~~~~~~~~~g   87 (904)
                      ....|.|...+.+...|.|.+....                 .+           .++.......|...+.|...+..++
T Consensus        16 ~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~   95 (523)
T 2rcj_C           16 QRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSDN   95 (523)
T ss_pred             CcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCCc
Confidence            5666677666667788999654210                 01           1223333444555555555544322


Q ss_pred             ee---eeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC--eEEEeeCCccccCCCCcee----ecc-
Q psy8771          88 RL---AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP--FVKWRKGQNIELTPDDKLP----VGR-  157 (904)
Q Consensus        88 ~~---~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~~~~~~----~~~-  157 (904)
                      ..   ..+.+.|.. ....+|.+...+.. ..+.+|+.+.|.|.+.|.|.+  .|+|+|+ |..+..+.+..    ..+ 
T Consensus        96 ~~~~~~~~~l~V~~-~~~~~P~~~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~  172 (523)
T 2rcj_C           96 SYVFGTGTKVTVLG-QPKANPTVTLFPPS-SEELQANKATLVCLISDFYPGAVTVAWKAD-GSPVKAGVETTKPSKQSNN  172 (523)
T ss_pred             cccccCceEEEecc-CCCcCCeEEecCCc-ccccCCCceEEEEEeccccCCceEEEEecC-CCCCCCceEeccccccCCC
Confidence            11   123333321 12467888777766 677789999999999998765  8999999 66665443321    112 


Q ss_pred             -----eEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEe--ecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCc-c
Q psy8771         158 -----NVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQC--KYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE-T  227 (904)
Q Consensus       158 -----~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~--~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~-~  227 (904)
                           ..|.|.++  +|+|.|+|.|.|..|.......+.+..  ...|... +.+|. ..+  .....+.|.+...+. +
T Consensus       173 ~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~-~~~~~-~~~--~~G~~~~l~C~~~g~~P  248 (523)
T 2rcj_C          173 KYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVF-PLAPS-SKS--TSGGTAALGCLVKDYFP  248 (523)
T ss_pred             CEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEE-ecCCC-ccc--ccCCceEEEEEEeceeC
Confidence                 36889888  699999999999988766655543220  0000000 00111 111  123445555544322 1


Q ss_pred             ceEEEEEEEeCCCCCCeE---Eee-c----ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         228 LLYYVIQYKPKAANTPYS---EIS-G----IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       228 ~~~y~v~~~~~~~~~~~~---~~~-~----~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      . ...|.|...+......   ... .    .....+.|.++...+ +.|+|.|.|..|..
T Consensus       249 ~-p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~  306 (523)
T 2rcj_C          249 Q-PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT  306 (523)
T ss_pred             C-CeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCc
Confidence            1 1134444332211100   000 0    113478999999999 99999999998864

>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}

Probab=99.33  E-value=3.8e-11  Score=115.55  Aligned_cols=160  Identities=11%  Similarity=0.092  Sum_probs=107.0

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee---ecceEEEEeee--cCCeEEEEEEEe
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP---VGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~---~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      .+|.|...|..  .+.+|++++|.|.+.| |.+.+.|+|+ +..+....+..   ...+.|.|.++  +|+|.|+|.|.|
T Consensus         4 ~~P~i~~~p~~--~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n   79 (196)
T 3p2t_A            4 PKPTLWAEPGS--VISWGNSVTIWCQGTL-EAREYRLDKE-ESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRS   79 (196)
T ss_dssp             CCCEEEEESCS--EEETTCCEEEEEECCT-TCCEEEEEET-TSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred             CCCEEEccCCC--cCCCCCcEEEEeeCCC-CCCEEEEEEC-CCCCcccccccccCCceEEEEeccCCcccCceEEEEEeC
Confidence            46788877764  7889999999999999 7789999999 55554322211   35678999999  699999999999


Q ss_pred             cCcc--eEEEEEEEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe---E--E
Q psy8771         178 VLGV--IETSTIVKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY---S--E  246 (904)
Q Consensus       178 ~~g~--~~~~~~l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~---~--~  246 (904)
                      ..|.  .+....|.|.       ..+.+|. +...    ......++|.+...+.+ .  .+.|...+.....   .  .
T Consensus        80 ~~g~~~~s~~~~l~V~-------~~~~~p~-~~~~~~~~v~~G~~v~L~C~~~~~~-~--~~~w~k~g~~~~~~~~~~~~  148 (196)
T 3p2t_A           80 PVGWSQPSDPLELVMT-------GAYSKPT-LSALPSPLVTSGKSVTLLCQSRSPM-D--TFLLCKERAAHPLLCLRSEH  148 (196)
T ss_dssp             TTEEBCCCCCEEEEEE-------CSSCCCE-EEEESCSEECTTCCEEEEEEEEEEE-E--EEEEEETTCCCGGGSEEEEE
T ss_pred             CCcccCCCccEEEEec-------CCCCCCE-EEeCCcceecCCCeEEEEEecCCCC-C--EEEEEeCCCcccceeecccc
Confidence            9883  3455666666       2222221 1111    12345677777654322 2  3445444322111   1  1


Q ss_pred             eecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         247 ISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       247 ~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      ........|.|.+++..+.+.|+|.|.|..+
T Consensus       149 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~  179 (196)
T 3p2t_A          149 GAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS  179 (196)
T ss_dssp             EEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred             cccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence            1223457799999999999999999999876

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}

Probab=99.33  E-value=1.7e-11  Score=126.55  Aligned_cols=224  Identities=13%  Similarity=0.055  Sum_probs=135.6

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC-------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEE
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP-------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFS  108 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~-------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~  108 (904)
                      ....|.|...+    .|.|.+....       ++.+........|.....|...+   |....+.+.+.     .+|.+.
T Consensus        28 ~~v~l~C~~~~----~i~W~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n---g~~~~~~l~V~-----~~~~~~   95 (290)
T 2o26_X           28 DTLSLTCIDPD----FVRWTFKTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSN---GLTSSIYVFVR-----DPAKLF   95 (290)
T ss_dssp             SCEEEEEECTT----EEEEEEECSSSCEEEECSSEEEETTCCGGGCEEEEEEESS---SCEEEEEEEEE-----CSSCCB
T ss_pred             CcEEEEECCCC----cEEEecCCcceeeecCCCceEEEeccCHHhCeEEEEEeeC---CccEEEEEEEe-----CCCccc
Confidence            44455555443    8999876432       24455555555555555555555   55555556654     344444


Q ss_pred             cCCCCceEEecCCCeEEEEEEccCCC-CeEEEe-eCCccccCCCCceee-cceEEEEeee--cCCe-EEEEEEEecCcce
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSPM-PFVKWR-KGQNIELTPDDKLPV-GRNVLTLDRV--TESE-NYTCIAASVLGVI  182 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~-k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g-~Y~c~a~n~~g~~  182 (904)
                      ..+.+ +.+.+|+.+.|.|.+.| |. +.|+|+ ++ +..+..+.++.. .++.|.|.++  +|+| .|+|.|.|..|..
T Consensus        96 ~~~~~-~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~-g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~  172 (290)
T 2o26_X           96 LVGLP-LFGKEDSDALVRCPLTD-PQVSQYSLIECD-GKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWL  172 (290)
T ss_dssp             CCCCC-EEEETTSCEEECCCBSC-CSCEEEEEEETT-SCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEE
T ss_pred             ccccc-eEEecCCeEEEeCcCCC-CCCceEEEEeCC-CcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceE
Confidence            55556 88999999999999997 77 999995 56 777777666654 4578999999  6999 9999999986553


Q ss_pred             E-EEEEEEEEee--cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC----CCeE----Ee---e
Q psy8771         183 E-TSTIVKVQCK--YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN----TPYS----EI---S  248 (904)
Q Consensus       183 ~-~~~~l~v~~~--~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~----~~~~----~~---~  248 (904)
                      . ....|.|...  ..|.+.  ..|.+..+  .....++|.+...+.+... .+.|...+..    ....    ..   .
T Consensus       173 ~s~~~~l~V~~~~~~~P~i~--~~~~~~~v--~~G~~v~l~C~~~g~p~p~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~  247 (290)
T 2o26_X          173 HSDKFTLKVREAIKAIPVVS--VPETSHLL--KKGDTFTVVCTIKDVSTSV-NSMWLKMNPQPQHIAQVKHNSWHRGDFN  247 (290)
T ss_dssp             ECCCEEEEEECCCCSCCEEE--CSCSBCCC--CTTCCEEEEEEEEESSTTC-EEEEEEESSSEEECCCEECCEEEEETTE
T ss_pred             EeEEEEEEEEeCCCCCCccc--cCCCcceE--ecCCcEEEEEEEecCCcce-eEEEecCCCCCccceeecccccccCcee
Confidence            3 3467776611  111111  11222211  2234455555543222211 1233322211    0100    00   1


Q ss_pred             cceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         249 GIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ......|.|.++...+.+.|+|.|.|..|..
T Consensus       248 ~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~  278 (290)
T 2o26_X          248 YERQETLTISSARVDDSGVFMCYANNTFGSA  278 (290)
T ss_dssp             EEEEEEEEESSCCSSSCEEEEEEEECSSCEE
T ss_pred             eEEEEEEEEcCCCcccCeEEEEEEeCCCCcE
Confidence            1334689999999999999999999998865

>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2.6e-12  Score=107.82  Aligned_cols=89  Identities=25%  Similarity=0.425  Sum_probs=75.6

Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCce-eecceEEEEeee--cCCeEEEEEEE
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKL-PVGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~-~~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      .+..||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....+. ..+...|.|.++  +|+|.|+|.|.
T Consensus         7 ~~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~   84 (99)
T 2yr3_A            7 GMEVAPSFSSVLKD-CAVIEGQDFVLQCSVRGTPVPRITWLLN-GQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAE   84 (99)
T ss_dssp             CCCEEEEEEECCCC-EEECTTCCEEEECEEEEESCCCCEEEES-SSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEE
T ss_pred             CcccCCceeecCCC-CEEeCCCeEEEEEEEeeeCCCeEEEEEC-CEECcccceEeeCCeEEEEECCCChhhCEEEEEEEE
Confidence            34678999998888 9999999999999999999999999999 6666544433 335678999999  69999999999


Q ss_pred             ecCcceEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKV  190 (904)
Q Consensus       177 n~~g~~~~~~~l~v  190 (904)
                      |..|..+..+.|.|
T Consensus        85 N~~g~~~~~~~l~V   98 (99)
T 2yr3_A           85 NALGQVSCSAWVTV   98 (99)
T ss_dssp             CSSCEEEEECCEEE
T ss_pred             ECCCeEEEEEEEEE
Confidence            99999888877776

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.33  E-value=1.1e-11  Score=106.02  Aligned_cols=100  Identities=21%  Similarity=0.214  Sum_probs=76.0

Q ss_pred             CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCC-ceeeEEE
Q psy8771         578 GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGE-NIISYEL  656 (904)
Q Consensus       578 ~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~-~~~~y~v  656 (904)
                      ..|.+|..+++..++.+++.|+|.++.+                                         .++ .+.+|.|
T Consensus         6 ~~P~~P~~p~~~~~~~~sv~l~W~~p~~-----------------------------------------~~~~~i~~Y~v   44 (109)
T 1x5x_A            6 SGPSMPASPVLTKAGITWLSLQWSKPSG-----------------------------------------TPSDEGISYIL   44 (109)
T ss_dssp             CCCCCCCCCEEEEECSSEEEEECCCCSS-----------------------------------------CCSSSSCEEEE
T ss_pred             CCCcCCCCCEEEEccCCEEEEEEcCCCC-----------------------------------------CCCCcccEEEE
Confidence            3455666666666677777777776654                                         444 6788888


Q ss_pred             EEEeCCcc-ccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC
Q psy8771         657 YWNDTYAK-AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA  718 (904)
Q Consensus       657 ~~~~~~~~-~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~  718 (904)
                      +|+..+.. .+..........+++.+|++++.|.|+|+|+|..|.|.+|..+.++|...+|..
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P~~  107 (109)
T 1x5x_A           45 EMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGPS  107 (109)
T ss_dssp             EECCSSSSCCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCCCCC
T ss_pred             EEecCCCCcceEEeEeCCccEEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCCCCC
Confidence            88876543 333344455679999999999999999999999999999999999998887763

>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A

Probab=99.33  E-value=2.8e-11  Score=130.66  Aligned_cols=150  Identities=17%  Similarity=0.290  Sum_probs=114.9

Q ss_pred             CCCCCcEEEeccCCceEEEEeCCCCC--------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCe
Q psy8771          35 TAPRDVQVRPLSSSTMVIQWDEPETP--------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQ  106 (904)
Q Consensus        35 ~~p~~l~~~~~~~~s~~v~W~~~~~~--------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~  106 (904)
                      +....|.|...+.+.+.+.|.+....        ++.+........+.....|...+..+.....+.+.+     ..+|.
T Consensus       222 G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V-----~~~p~  296 (382)
T 1cs6_A          222 GQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIII-----HAQPD  296 (382)
T ss_dssp             TCCEEEECEEEEESCCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE-----EEEEE
T ss_pred             CCeEEEEEEEccCCCCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEE-----ecCCC
Confidence            35667777777788889999765322        233444444444555555555444333333444444     45788


Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIET  184 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~  184 (904)
                      |...+.. ..+.+|+.++|.|.+.|.|.|.|.|+|+ +..+....++.+.++.|.|.++  +|+|.|+|.|.|..|...+
T Consensus       297 ~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~  374 (382)
T 1cs6_A          297 WLDVITD-TEADIGSDLRWSCVASGKPRPAVRWLRD-GQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYA  374 (382)
T ss_dssp             EEECCCC-EEEETTCCEEEECEEEEESCCEEEEEET-TEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred             cccCCCc-cEEcCCCeEEEEEEeeeecCCEEEEEEC-CEECCCCceEEEECCEEEECcCCcccCEEEEEEEEeCCCeEEE
Confidence            8888887 8999999999999999999999999999 7788877888888889999999  6999999999999999999


Q ss_pred             EEEEEEE
Q psy8771         185 STIVKVQ  191 (904)
Q Consensus       185 ~~~l~v~  191 (904)
                      .+.|.|.
T Consensus       375 ~~~l~V~  381 (382)
T 1cs6_A          375 SAELTVQ  381 (382)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEe
Confidence            9999886

>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}

Probab=99.32  E-value=3.7e-11  Score=114.17  Aligned_cols=156  Identities=11%  Similarity=0.094  Sum_probs=105.7

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      ..+|.|...|.  ..+.+|++++|.|.+.| |.+.+.|+|+ +..      .....+.|.|.++  +|+|.|+|.|.|..
T Consensus         6 ~~~P~i~~~p~--~~v~~G~~v~L~C~~~~-~~~~~~W~k~-g~~------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~   75 (184)
T 2gi7_A            6 LPKPSLQALPS--SLVPLEKPVTLRCQGPP-GVDLYRLEKL-SSS------RYQDQAVLFIPAMKRSLAGRYRCSYQNGS   75 (184)
T ss_dssp             BCCCEEEEESC--SEEETTCCEEEEEECST-TCSEEEEEET-TTC------CEESSSEEEESSCCGGGCEEEEEEEEETT
T ss_pred             CCCCeEEeCCC--ccccCCCcEEEEEeCCC-CCCEEEEEEC-Ccc------ccCcccEEEECcCChhhCceEEEEEEcCC
Confidence            56788887776  47899999999999998 7889999999 443      2346789999999  69999999999988


Q ss_pred             cc--eEEEEEEEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceec
Q psy8771         180 GV--IETSTIVKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITT  253 (904)
Q Consensus       180 g~--~~~~~~l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~  253 (904)
                      |.  .+....|.|.       ..+.+|. +...    ......++|.+...+.+. .  +.|...+..............
T Consensus        76 g~~~~s~~~~l~V~-------~~~~~p~-i~~~p~~~v~~G~~v~l~C~~~~~~~-~--~~w~k~g~~~~~~~~~~~~~~  144 (184)
T 2gi7_A           76 LWSLPSDQLELVAT-------GVFAKPS-LSAQPGPAVSSGGDVTLQCQTRYGFD-Q--FALYKEGDPAPYKNPERWYRA  144 (184)
T ss_dssp             EEBCCCCCEEEEEE-------SSSCCCE-EEEECCCSSCCTTCEEEEEECSSCCC-E--EEEEECCCCTTSCCCCEEEEE
T ss_pred             CccCCCCCEEEEec-------CcCCCCE-EEeCCCceecCCCcEEEEEEcCCCCc-E--EEEEECCCcCcceecCCCceE
Confidence            64  2345666665       2222222 1111    122457788887654332 3  344443322211111122346


Q ss_pred             eEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         254 YYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       254 ~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      .|.|.+++..+.+.|+|.|.|..+.
T Consensus       145 ~L~i~~v~~~D~G~Y~C~a~n~~~~  169 (184)
T 2gi7_A          145 SFPIITVTAAHSGTYRCYSFSSRDP  169 (184)
T ss_dssp             SSSEEEETTCCSEEEEEEEECTTST
T ss_pred             EEEEccCCccCCeEEEEEEEeCCCC
Confidence            6889999999999999999998653

>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.32  E-value=5.1e-12  Score=109.95  Aligned_cols=88  Identities=33%  Similarity=0.595  Sum_probs=76.9

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-CCCcee-ecceEEEEeee--cCCeEEEEEEEe
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-PDDKLP-VGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      ..||.|...|.+ +.+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+. ...++. ..++.|.|.++  +|+|.|+|.|.|
T Consensus         6 ~~pP~i~~~p~~-~~v~~G~~v~l~C~~~g~p~p~i~W~k~-g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n   83 (118)
T 2eo9_A            6 SGPPVIRQGPVN-QTVAVDGTFVLSCVATGSPVPTILWRKD-GVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIAST   83 (118)
T ss_dssp             CCSCCCSBCCCC-EEEETTCEEEEECBCCCSSCCEEEEEES-SSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEEC
T ss_pred             CCCCEEEcCCCC-EEEcCCCeEEEEEEEEecCCCEEEEEEC-CEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEc
Confidence            578999988888 9999999999999999999999999999 66654 344554 46779999999  699999999999


Q ss_pred             cCcceEEEEEEEEE
Q psy8771         178 VLGVIETSTIVKVQ  191 (904)
Q Consensus       178 ~~g~~~~~~~l~v~  191 (904)
                      ..|.....+.|.|.
T Consensus        84 ~~g~~~~~~~l~V~   97 (118)
T 2eo9_A           84 PSGEATWSAYIEVQ   97 (118)
T ss_dssp             SSCEEEEECCEEEE
T ss_pred             CCCcEEEEEEEEEE
Confidence            99999888889888

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.32  E-value=9.2e-12  Score=108.55  Aligned_cols=108  Identities=22%  Similarity=0.311  Sum_probs=89.5

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCC-CC------c--eeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETP-NG------Q--ITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT  553 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~-~~------~--i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~  553 (904)
                      ....++.+..++.+++.|+|.+|... +|      .  +..|.|+|......  ..+.....+..++++|.+|+|++.|.
T Consensus        19 s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~--~~~~~~~~g~~ts~~v~~L~P~T~Y~   96 (137)
T 1wk0_A           19 SNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKD--GKYKSVYVGEETNITLNDLKPAMDYH   96 (137)
T ss_dssp             TCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTT--SCCEEEEEESCSEEEECSCCTTCEEC
T ss_pred             CCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCC--CceEEEEecCccEEEEcCCCCCCEEE
Confidence            45567889999999999999997654 33      2  58999999776432  34555556888999999999999999


Q ss_pred             EEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecC
Q psy8771         554 IRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQ  592 (904)
Q Consensus       554 ~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~  592 (904)
                      |+|+|+|..|.|++|..+.|+|....|..|..+++...+
T Consensus        97 ~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l~~~t  135 (137)
T 1wk0_A           97 AKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRISGPS  135 (137)
T ss_dssp             EEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCCCSCC
T ss_pred             EEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEEeCCC
Confidence            999999999999999999999999999888888776543

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}

Probab=99.32  E-value=8.8e-12  Score=119.72  Aligned_cols=165  Identities=19%  Similarity=0.345  Sum_probs=112.0

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceee--cceEEEEeee--cCCeEEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV--GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ..+|.|...+.. +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+.. ..++.+  +...|.|.++  +|+|.|+|.+.
T Consensus         5 ~~~P~i~~~~~~-~~~~~G~~v~l~C~~~~~p~~~i~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~   82 (192)
T 2iep_A            5 PKAPVITTPLET-VDALVEEVATFMCAVESYPQPEISWTRN-KILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTAN   82 (192)
T ss_dssp             CEEEEESSCCCE-EEEETTSCEEEECCEEEESCCEEEEEET-TEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEE
T ss_pred             CCCceeecCccc-eeeeCCCcEEEEeeCCCCCCCeEEEEEC-CEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEE
Confidence            457888888877 9999999999999999999999999999 555543 455554  4557999999  69999999999


Q ss_pred             ecCcc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeecce
Q psy8771         177 SVLGV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISGII  251 (904)
Q Consensus       177 n~~g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~  251 (904)
                      |..|. ......|.|....  ...  ..|..+.+.  ....+.|.+...+.+..  .+.|...+.    ......   ..
T Consensus        83 ~~~~~~~~~~~~l~v~~~p--~~~--~~~~~~~~~--~g~~~~l~C~~~g~p~~--~v~W~~~~~~~~~~~~~~~---~~  151 (192)
T 2iep_A           83 NGVGGAVESCGALQVKMKP--KIT--RPPINVKII--EGLKAVLPCTTMGNPKP--SVSWIKGDSALRENSRIAV---LE  151 (192)
T ss_dssp             CSSSCCEEEEEEEEEEEEE--EEE--ECCCCEEEE--TTSCEEECCEEEEESCC--EEEEEETTEECCCCSSEEE---CT
T ss_pred             cCCCceeEeEEEEEEEeCC--ccc--cCCcceEEe--CCCcEEEEEEEeccCCc--eEEEEeCCEEccCCCcEEE---ec
Confidence            99887 4566677776321  111  123344333  23345555554322222  244443321    111111   12


Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.|.++...+.+.|+|.|.|..|..
T Consensus       152 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~  179 (192)
T 2iep_A          152 SGSLRIHNVQKEDAGQYRCVAKNSLGTA  179 (192)
T ss_dssp             TSCEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             CCcEEEecCChhhCEEEEEEEEcCCCcE
Confidence            2469999999999999999999998865

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}

Probab=99.32  E-value=1.6e-11  Score=107.08  Aligned_cols=103  Identities=21%  Similarity=0.363  Sum_probs=72.7

Q ss_pred             CCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCc-eeeEE
Q psy8771         577 QGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN-IISYE  655 (904)
Q Consensus       577 ~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~-~~~y~  655 (904)
                      ...|.+|.++.+...+.+ +.|+|++|..                                         .++. +.+|.
T Consensus         5 ~~~P~~P~~~~~~~~~~t-v~l~W~~P~~-----------------------------------------~~G~pI~~Y~   42 (122)
T 2e3v_A            5 SSGPSSPSIDQVEPYSST-AQVQFDEPEA-----------------------------------------TGGVPILKYK   42 (122)
T ss_dssp             -CCCCCCEEEEEEECSSC-EEEEEECCCC-----------------------------------------C--CCEEEEE
T ss_pred             CcCCcCCCccEEEecCCc-EEEEECCCCc-----------------------------------------CCCCcceEEE
Confidence            345666777777776666 7777777754                                         4554 88999


Q ss_pred             EEEEeCCccccceE-E----ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCC
Q psy8771         656 LYWNDTYAKAKHHR-R----IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ  721 (904)
Q Consensus       656 v~~~~~~~~~~~~~-~----~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~  721 (904)
                      |+|+..+...+... .    ....+.++|.+|+|++.|.|+|+|+|..|.|.+|..+.++|....++.+|.
T Consensus        43 v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~~P~~P~  113 (122)
T 2e3v_A           43 AEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPK  113 (122)
T ss_dssp             EEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCC---
T ss_pred             EEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCCCCCCCCe
Confidence            99988765544211 1    134679999999999999999999999999999998888666544443454

>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=6.9e-12  Score=105.41  Aligned_cols=89  Identities=25%  Similarity=0.509  Sum_probs=77.1

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-CCCcee-ecceEEEEeee--cCCeEEEEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-PDDKLP-VGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ...||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+. ...++. ..++.|.|.++  +|+|.|+|.|.
T Consensus         5 ~~~~P~i~~~p~~-~~v~~G~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~   82 (100)
T 2edj_A            5 SSGPPIILQGPAN-QTLAVDGTALLKCKATGDPLPVISWLKE-GFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVAT   82 (100)
T ss_dssp             CCSSCEEEECCCC-EEEESSSEEEECCEEECSSCCEEEEEES-SSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEE
T ss_pred             CCCCCEEEeCcCC-EEEcCCCcEEEEEEEEEcCCCEEEEEEC-CEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEE
Confidence            3678999999988 9999999999999999999999999999 55554 344444 36778999999  69999999999


Q ss_pred             ecCcceEEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKVQ  191 (904)
Q Consensus       177 n~~g~~~~~~~l~v~  191 (904)
                      |..|..+..+.|.|.
T Consensus        83 n~~g~~~~~~~l~V~   97 (100)
T 2edj_A           83 SSSGETSWSAVLDVT   97 (100)
T ss_dssp             CSSCCCBCCEEEEEE
T ss_pred             cCCCCEEEEEEEEEe
Confidence            999999999999887

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.32  E-value=2.2e-12  Score=107.80  Aligned_cols=93  Identities=20%  Similarity=0.327  Sum_probs=78.1

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEEEcCCCCCCeEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      .|+.+|.+|.+.. ..+++.|+|.+|.+.++.+.+|.|+|+..+    ..|....   ....+++.+.+|.+++.|.|+|
T Consensus         6 ep~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~~----~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV   80 (108)
T 1v5j_A            6 SGLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGS----QGWEVLDPAVAGTETELLVPGLIKDVLYEFRL   80 (108)
T ss_dssp             CCCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETT----CCCEEEEEEECSSCCEEECCCCCTTSCEECCB
T ss_pred             CCCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeCC----CCcEEeeeecCCCcCEEEeCCCCCCCEEEEEE
Confidence            4568999999876 567999999999887789999999999843    4565433   3567889999999999999999


Q ss_pred             EEEeCCCCCCCCCcEEEecCC
Q psy8771         557 QAFTSVGPGPLSAPVLVKTQQ  577 (904)
Q Consensus       557 ~a~~~~g~~~~S~~~~~~t~~  577 (904)
                      +|+|..|.|..|..+.+.|..
T Consensus        81 ~A~n~~G~s~pS~~~~v~T~~  101 (108)
T 1v5j_A           81 VAFAGSFVSDPSNTANVSTSG  101 (108)
T ss_dssp             EEEETTEEEEECSCCCCCCSS
T ss_pred             EEEcCCCCcCCCCCEEEEeCC
Confidence            999999999999988887754

>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.32  E-value=4.6e-12  Score=108.74  Aligned_cols=95  Identities=25%  Similarity=0.392  Sum_probs=80.3

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee--e-c--ceEEEEeee--cCCeEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP--V-G--RNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~--~-~--~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ..+|.|...|.+ +.+.+|+.++|.|.+.|.|.|.|.|+|+ +..+....+..  . .  ...|.|.++  +|+|.|+|.
T Consensus         7 ~~~P~i~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~   84 (110)
T 2dm3_A            7 GFRPHFLQAPGD-LTVQEGKLCRMDCKVSGLPTPDLSWQLD-GKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCI   84 (110)
T ss_dssp             CCCCEEEECCCE-EEEESSSCBCCEEEEECSSCCEEECBBS-SSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEE
T ss_pred             CCCCcEEeCCCc-EEEeCCCEEEEEEEEEEcCCCEEEEEEC-CEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEE
Confidence            578999999888 9999999999999999999999999999 66665544332  1 2  348999999  699999999


Q ss_pred             EEecCcceEEEEEEEEEeecCCCCCCCCCCc
Q psy8771         175 AASVLGVIETSTIVKVQCKYAPLLTLPVAPL  205 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~  205 (904)
                      |.|..|..+..+.|.|.       ..|.+|.
T Consensus        85 a~n~~g~~~~~~~l~V~-------~~p~~P~  108 (110)
T 2dm3_A           85 ATNRAGQNSFSLELVVA-------AKESGPS  108 (110)
T ss_dssp             EECSSCEEEECCEEEEE-------CCCCSSS
T ss_pred             EECCCCEEEEEEEEEEe-------CCCCCCC
Confidence            99999999999999999       6666664

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A

Probab=99.32  E-value=4.1e-11  Score=117.86  Aligned_cols=186  Identities=15%  Similarity=0.173  Sum_probs=127.8

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE--ee---cCceEEEE--cCCCCCCeEEEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ--VV---DNNQLTTI--SDLTPHTIYTIR  555 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--~~---~~~~~~~~--~~L~p~t~Y~~~  555 (904)
                      ..|.+|.....+...+.++|+++.+.++...+|.|.|+..+.. ...+...  ..   .....+.+  .++...+.|.|+
T Consensus        22 ~~P~nl~C~~~~~~~l~C~W~~~~~~~~~~~~y~l~y~~~~~~-~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~~  100 (227)
T 1eer_B           22 RGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLEDEP-WKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELR  100 (227)
T ss_dssp             HSTTSCEEEBSSSSCCEEEEEESCCSSCCTTSEEEEEEETTSC-CEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEEE
T ss_pred             cCCcCCeEECCCCCEEEEEecCCCCCCCCCccEEEEEEcCCCC-ceeccceeccCCCCCceEEEEeCCCcceeeEEEEEE
Confidence            3688999999888999999999876544668999999875321 1111111  11   11223444  467889999999


Q ss_pred             EEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecC-CCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeec
Q psy8771         556 VQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQ-ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQ  633 (904)
Q Consensus       556 V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~-~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~  633 (904)
                      |.|.++.  +  .....+.... ..|.+|.++.+...+ .+.+.|+|.+|...                           
T Consensus       101 V~a~~~~--~--~~~~~~~~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~---------------------------  149 (227)
T 1eer_B          101 VTAASGA--P--RYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPET---------------------------  149 (227)
T ss_dssp             EEETTSC--E--EEEEEECGGGSEECCCCEEEEEEECSSTTCEEEEEECCSSC---------------------------
T ss_pred             EEecCCC--c--cEEEEEEeeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCc---------------------------
Confidence            9986532  2  1122343333 257889999998874 78999999988530                           


Q ss_pred             cceEEEeccCCCCCCCceeeEEEEEEeCCccccce--EEecccceEEEeCCCCCcEEEEEEEEEcCC----C-CCCCCCC
Q psy8771         634 ETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHH--RRIGLVETYSLTGLYPNTLYYIWLAAQSPR----G-EGATTPP  706 (904)
Q Consensus       634 ~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~--~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~----G-~~~~s~~  706 (904)
                                   ....+..|.|+|+..+...+..  ......+.+.|.+|+|++.|.|+|+|....    | .|.+|..
T Consensus       150 -------------~~~~~l~Yev~y~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~  216 (227)
T 1eer_B          150 -------------PMTSHIRYEVDVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEP  216 (227)
T ss_dssp             -------------SCGGGEEEEEEEECCSSSCCCCEEEECTTCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCC
T ss_pred             -------------ccccceEEEEEEEcCCCCCcEEEEEEecCceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCC
Confidence                         1123789999999876554432  334556789999999999999999999651    3 2788988


Q ss_pred             eeEEecC
Q psy8771         707 IPVRTKQ  713 (904)
Q Consensus       707 ~~~~t~~  713 (904)
                      +.+.|..
T Consensus       217 ~~~~t~~  223 (227)
T 1eer_B          217 VSLLTPS  223 (227)
T ss_dssp             EEEEC--
T ss_pred             EEEECcc
Confidence            8888843

>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B

Probab=99.32  E-value=1.4e-11  Score=119.45  Aligned_cols=161  Identities=16%  Similarity=0.147  Sum_probs=102.9

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCC-----CeEEEeeCCccccCCCCceee-------cceEEEEeee--cCCeEEEE
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPM-----PFVKWRKGQNIELTPDDKLPV-------GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~-----p~i~W~k~~~~~~~~~~~~~~-------~~~~l~i~~l--~d~g~Y~c  173 (904)
                      ..++.. +.+.+|+++.|.|.+.|.|.     +.|.|+|+++.......|+.+       ++.+|.|.++  +|+|.|+|
T Consensus         6 ~~p~~~-v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C   84 (202)
T 3bp6_B            6 TAPKEV-YTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRC   84 (202)
T ss_dssp             ECSCSE-EEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEE
T ss_pred             ecCCcC-EEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEE
Confidence            334445 89999999999999999987     899999943555544455543       3378999999  69999999


Q ss_pred             EEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEE-EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEe--ecc
Q psy8771         174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKI-SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEI--SGI  250 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~-~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~--~~~  250 (904)
                      .|.|..|..+....|.|.       ..+..|. +.+ .......+.|.+...+.+.  -.|.|...+........  ...
T Consensus        85 ~~~~~~~~~~~~~~l~V~-------~~~~~p~-~~~~~~~~g~~v~l~C~~~g~P~--p~v~W~~~~~~~~~~~~~~~~~  154 (202)
T 3bp6_B           85 LVICGAAWDYKYLTVKVK-------ASYMRID-TRILEVPGTGEVQLTCQARGYPL--AEVSWQNVSVPANTSHIRTPEG  154 (202)
T ss_dssp             EEEETTEEEEEEEEEEEE-------BCCCCEE-EEEEECTTTCCEEEEEEEEEBSC--CEEEETTCCSCCEEEEEECTTS
T ss_pred             EEEeCCCcceEEEEEEec-------CCCCccc-EEEEecCCCCeEEEEEEccccCC--ceEEEEeCCCCccCceeeCCCC
Confidence            999999988888888887       3333332 222 2223445555555432222  13444433221111111  111


Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ....+.+..+...+.+.|+|.|.|..|..
T Consensus       155 ~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~  183 (202)
T 3bp6_B          155 LYQVTSVLRLKPQPSRNFSCMFWNAHMKE  183 (202)
T ss_dssp             CEEEEEEEEECCCTTCCEEEEEEETTTTE
T ss_pred             CEEEEEEEEEEcCCCCEEEEEEEcCCccc
Confidence            12334566788888999999999998864

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.32  E-value=2e-11  Score=105.29  Aligned_cols=106  Identities=21%  Similarity=0.345  Sum_probs=82.6

Q ss_pred             eeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeE
Q psy8771         473 PVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIY  552 (904)
Q Consensus       473 ~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y  552 (904)
                      ...+.+...|.+|.++++...+ +++.|+|++|...+|.+.+|.|+|+....   ..+........+++.|.+|.|++.|
T Consensus         9 ~~~t~e~~~P~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~---~~~~~~~~~~~~~~~l~~L~p~t~Y   84 (116)
T 2edb_A            9 ENDLDESQVPDQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP---YAETVRVDSKQRYYSIERLESSSHY   84 (116)
T ss_dssp             SSSCBCSSCCCCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST---TSEEEEEETTCCEEEECSCCSSSBE
T ss_pred             cccCCCCCCCCCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC---CeEEEEeCCCeeEEEeCCCCCCCEE
Confidence            3344442344699999999998 99999999998888899999999986431   2233444577788999999999999


Q ss_pred             EEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         553 TIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       553 ~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      .|+|+|+|..|.|..+. ..+.|....|.++
T Consensus        85 ~~~V~A~n~~G~g~~~~-~~~~T~~~~P~p~  114 (116)
T 2edb_A           85 VISLKAFNNAGEGVPLY-ESATTRSITSGPS  114 (116)
T ss_dssp             EEEEEEEETTEECSCEE-ECCBCCCSSSCSC
T ss_pred             EEEEEEEeCCccCCCCc-ceeecccCCCCCC
Confidence            99999999999987554 4566766666654

>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}

Probab=99.32  E-value=9.8e-12  Score=104.29  Aligned_cols=89  Identities=21%  Similarity=0.339  Sum_probs=77.4

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~  174 (904)
                      +..+|.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+.    ...|.|.++  +|+|.|+|.
T Consensus         3 ~~~~P~i~~~~~~-~~v~~G~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~   80 (99)
T 3puc_A            3 ISSKPVIVTGLQD-TTVSSDSVAKFAVKATGEPRPTAIWTKD-GKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCT   80 (99)
T ss_dssp             CCEEEEEEECCCC-EEEESSSCEEEEEEEEEESCCEEEEEET-TEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred             CCCCCEEEecCcc-EEEeCCCcEEEEEEEEecCCCEEEEEEC-CEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEE
Confidence            3567889998888 9999999999999999999999999999 7777766666542    237999998  699999999


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.|..|.....+.|.|.
T Consensus        81 a~n~~g~~~~~~~l~V~   97 (99)
T 3puc_A           81 VKNSAGSVSSSCKLTIK   97 (99)
T ss_dssp             EEETTEEEEEEEEEEEE
T ss_pred             EEeCCCcEeEEEEEEEE
Confidence            99999999999888886

>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0

Probab=99.31  E-value=5.1e-12  Score=108.04  Aligned_cols=89  Identities=30%  Similarity=0.531  Sum_probs=67.6

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      +..+|.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++..  .++.|.|.++  +|+|.|+|.|.
T Consensus         7 ~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~   84 (108)
T 3kvq_A            7 ERVAPTITGNLEN-QTTSIGESIEVSCTASGNPPPQIMWFKD-NETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQAC   84 (108)
T ss_dssp             ----CCCBSCCCC-EEEETTCCEEEECBCC----CCEEEEES-SSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC
T ss_pred             ccCCCceecCCCC-eEEeCCCeEEEEEECcCcCCCeEEEEEC-CeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEE
Confidence            4678999988888 9999999999999999999999999999 666655555443  5678999999  69999999999


Q ss_pred             ecCcceEEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKVQ  191 (904)
Q Consensus       177 n~~g~~~~~~~l~v~  191 (904)
                      |..|.....+.|.|.
T Consensus        85 n~~g~~~~~~~l~V~   99 (108)
T 3kvq_A           85 SVLGCAKVEAFFIIE   99 (108)
T ss_dssp             ----CEEEEEEEEEE
T ss_pred             eCCCceEEEEEEEEe
Confidence            999999999999998

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}

Probab=99.31  E-value=1e-10  Score=112.89  Aligned_cols=178  Identities=14%  Similarity=0.143  Sum_probs=113.3

Q ss_pred             CCCCeEEEec-CCceEEEEecCCCCCCCcee-eEEEEEEeCCCCCC--------cceEEEee--cCceEEEEcCCCCCCe
Q psy8771         484 APRDVQVRPL-SSSTMVIQWDEPETPNGQIT-GYKVYYTQDQSLPM--------SAWETQVV--DNNQLTTISDLTPHTI  551 (904)
Q Consensus       484 ~p~~l~v~~~-~~~~~~l~W~~p~~~~~~i~-~Y~v~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~~L~p~t~  551 (904)
                      .|.||..... ....+..+|++..+.+ ... .|.+.|......-.        .....-..  .....+.+..|...+.
T Consensus         3 ~~~nlsC~~~~~~~~~~C~W~~g~~~~-l~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~~~   81 (206)
T 3v6o_A            3 VNINISCETDGYLTKMTCRWSTSTIQS-LAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLLSG   81 (206)
T ss_dssp             -CCCCEEEECTTSSCEEEEECCCC---------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTTSC
T ss_pred             CCEEEEEEECCCCcEEEEEecCCCcCC-cccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhccc
Confidence            5678888777 5689999999965432 223 78888876431000        00000011  3345788989988999


Q ss_pred             EEEEEEEEeCCCCCCCCCcEEEec-CCCCCCCCCCceEEec-CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEE
Q psy8771         552 YTIRVQAFTSVGPGPLSAPVLVKT-QQGVPSQPRDLRAVDI-QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRA  629 (904)
Q Consensus       552 Y~~~V~a~~~~g~~~~S~~~~~~t-~~~~p~~p~~~~~~~~-~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~  629 (904)
                      |.|+|.|.|..|.+. |....+.. ....|.+|.++.+... ..+.+.|+|..|..                        
T Consensus        82 Y~~~V~a~N~~G~~~-s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~------------------------  136 (206)
T 3v6o_A           82 YTMWIRINHSLGSLD-SPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVF------------------------  136 (206)
T ss_dssp             EEEEEEEC---CCEE-CCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC-----------------------------
T ss_pred             EEEEEEEEcCCcccc-CCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCC------------------------
Confidence            999999999998654 56666653 3345778999988765 57899999998753                        


Q ss_pred             EeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-cccceEEecc--cceEEEeCCCCCcEEEEEEEEEcCCCCCCCCC
Q psy8771         630 VDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KAKHHRRIGL--VETYSLTGLYPNTLYYIWLAAQSPRGEGATTP  705 (904)
Q Consensus       630 ~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~--~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~  705 (904)
                                       . .....|.|+|+..+. ..+.......  ...+.|.+|+|++.|.|+|+|.+..|.|.+|+
T Consensus       137 -----------------~-~~~l~yev~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe  197 (206)
T 3v6o_A          137 -----------------P-ENNLQFQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSN  197 (206)
T ss_dssp             ---------------------CEEEEEEEEESSSSCCCEEEEECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred             -----------------C-CCcEEEEEEEEECCCCCceEEEecccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence                             1 235799999998763 3443333222  24689999999999999999999877765553

>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A

Probab=99.31  E-value=2.5e-11  Score=117.15  Aligned_cols=162  Identities=15%  Similarity=0.169  Sum_probs=100.1

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee--ecceEEEEeee--cCCeEEEEEEEecCcceEE
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP--VGRNVLTLDRV--TESENYTCIAASVLGVIET  184 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~--~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~  184 (904)
                      ..|.+.+.+.+|+.++|.|.+.|.|.|.|.|++..+..+.  .+..  ...+.|.|.++  +|+|.|+|.|.|..|..+.
T Consensus         5 i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~   82 (202)
T 1vca_A            5 TTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK   82 (202)
T ss_dssp             EESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred             ECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence            3445535556999999999999999999999995333322  2222  24567999998  6999999999999998888


Q ss_pred             EEEEEEEeecCCCCCCCCCCcceE-EEeecCCeEEEEEeCCCc-cceEEEEEEEeCCCCCCeEEee--------cceece
Q psy8771         185 STIVKVQCKYAPLLTLPVAPLDVK-ISEVTATSVRLDWTYPSE-TLLYYVIQYKPKAANTPYSEIS--------GIITTY  254 (904)
Q Consensus       185 ~~~l~v~~~~~~~~~~P~~p~~l~-~~~~~~~sv~l~W~~~~~-~~~~y~v~~~~~~~~~~~~~~~--------~~~~~~  254 (904)
                      .+.|.|.       ..|..+.-.. ........++|.+...+. +.....|.|...+.........        ......
T Consensus        83 ~~~l~V~-------~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~  155 (202)
T 1vca_A           83 GIQVEIY-------SFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLE  155 (202)
T ss_dssp             EEEEEEE-------BCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEE
T ss_pred             EEEEEEE-------eCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEE
Confidence            8888887       3332221100 011223445555554321 2222344554432110000000        112344


Q ss_pred             EEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         255 YTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       255 ~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      +.|......+...|+|+|.|..|..
T Consensus       156 l~i~~~~~d~~g~ytC~A~n~~~~~  180 (202)
T 1vca_A          156 VTFTPVIEDIGKVLVCRAKLHIDEM  180 (202)
T ss_dssp             EEECCCGGGTTCEEEEEEEECSCCC
T ss_pred             EEEEeeeccCCCeEEEEEEccccCC
Confidence            6778777778889999999988764

>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*

Probab=99.31  E-value=9.4e-12  Score=119.63  Aligned_cols=156  Identities=12%  Similarity=0.025  Sum_probs=94.1

Q ss_pred             eEEecCCCeEEEEE---EccCCCCeEEEeeCCccccCC-----------------CCcee----ecceEEEEeee--cCC
Q psy8771         115 LEVMLDSPLNLSCV---AVGSPMPFVKWRKGQNIELTP-----------------DDKLP----VGRNVLTLDRV--TES  168 (904)
Q Consensus       115 ~~~~~g~~~~l~C~---~~g~p~p~i~W~k~~~~~~~~-----------------~~~~~----~~~~~l~i~~l--~d~  168 (904)
                      +++..|++++|.|.   +.|.|.+.|+|+|+ |.....                 ..++.    .+...|.|.++  +|+
T Consensus         3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~   81 (203)
T 4fa8_A            3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKL-GPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD   81 (203)
T ss_dssp             CEEETTCCEEEEEECSSTTCSTTSEEEEEEE-ETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             eEEEcCCCEEEEeeeeccCCCCCcEEEEEEc-CCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence            78999999999995   66899999999998 432210                 01111    13457999999  799


Q ss_pred             eEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC--------
Q psy8771         169 ENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA--------  240 (904)
Q Consensus       169 g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~--------  240 (904)
                      |.|+|.|.|..|.....+.|.|....  ...  ..|.+..+  .....++|.+...+.|..  .|.|...++        
T Consensus        82 G~Y~C~a~n~~g~~~~~~~l~V~~p~--~~~--~~~~~~~v--~~g~~~~l~C~~~G~P~P--~v~W~~~~~~~~~~~~~  153 (203)
T 4fa8_A           82 GNYLCRMKLGETEVTKQEHLSVVKPL--TLS--VHSERSQF--PDFSVLTVTCTVNAFPHP--HVQWLMPEGVEPAPTAA  153 (203)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEEEEEE--EEE--EEEEECCS--SCSCCEEEEEEEEEESCC--EEEECCC----------
T ss_pred             eEEEEEEEcCCCcEEEEEEEEecCCc--eee--ecceeEEE--cCCCEEEEEEEcCCCCCC--EEEEEECCeeecCcccc
Confidence            99999999999999998888887211  000  01111111  111233444333222211  233322110        


Q ss_pred             CCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         241 NTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       241 ~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+....++.-..+.+.++++.+.+.|+|.|.|..|+.
T Consensus       154 ~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a  192 (203)
T 4fa8_A          154 NGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEA  192 (203)
T ss_dssp             --CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEE
T ss_pred             cceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEE
Confidence            111222222332345667899999999999999999974

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*

Probab=99.31  E-value=7.4e-11  Score=121.77  Aligned_cols=224  Identities=11%  Similarity=0.129  Sum_probs=135.2

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC---------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCe
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP---------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQ  106 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~---------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~  106 (904)
                      ....|.|...+    .|.|.++...         ++.+........+.....|...+...+....+.+.+..     +|.
T Consensus        20 ~~v~L~C~~~~----~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~-----~~~   90 (289)
T 3ejj_X           20 ETVTLRCVSNG----SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKD-----PAH   90 (289)
T ss_dssp             CCEEEEEECSS----CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECC-----SSC
T ss_pred             CCEEEEEEeCC----cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeC-----CCc
Confidence            45555555433    4999866322         23344444555555555555554444445555666543     332


Q ss_pred             -EEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEE-ecCc
Q psy8771         107 -FSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAA-SVLG  180 (904)
Q Consensus       107 -~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~-n~~g  180 (904)
                       +...+.. ..+.+|+.+.|.|.+.|.|.+. |.|++.++..+....++.. .++.|.|.++  +|+|.|+|.|. +..+
T Consensus        91 ~~~~~~~~-~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~  169 (289)
T 3ejj_X           91 SWNLLAQE-VTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRE  169 (289)
T ss_dssp             SEEESCSE-EEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred             ceecccce-EEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCc
Confidence             5555655 9999999999999999988775 9998754777766666654 5678999998  69999999999 5555


Q ss_pred             ceEEEEEEEEEeecCCCCCCC-CCC------cceEEEeecCCeEEEEEeCCC-ccceEEEEEEEeCCCCCC--eEE----
Q psy8771         181 VIETSTIVKVQCKYAPLLTLP-VAP------LDVKISEVTATSVRLDWTYPS-ETLLYYVIQYKPKAANTP--YSE----  246 (904)
Q Consensus       181 ~~~~~~~l~v~~~~~~~~~~P-~~p------~~l~~~~~~~~sv~l~W~~~~-~~~~~y~v~~~~~~~~~~--~~~----  246 (904)
                      ..+....|.|.       ..+ .+|      ....+  .....++|.+...+ .+.  ..+.|...+....  ...    
T Consensus       170 ~~~~~~~l~V~-------~~~~~~p~i~~~~~~~~~--~~g~~~~l~C~~~~~~p~--~~i~W~~~~~~~~~~~~~~~~~  238 (289)
T 3ejj_X          170 STSTGIWLKVN-------RVHPEPPQIKLEPSKLVR--IRGEAAQIVCSATNAEVG--FNVILKRGDTKLEIPLNSDFQD  238 (289)
T ss_dssp             EECCCEEEEEE-------SSCCCCCEEEEESSSEEC--CSSSCEEEEEEEEESSSC--CEEEEEETTEECCCCEEEEECS
T ss_pred             cccccEEEEEE-------ECCCCCCeEEecCCceEE--EeCCcEEEEEEeCCCCCc--eEEEEEECCEEeeccCCccccc
Confidence            56677777777       211 122      11111  12334444444322 111  1344443321110  000    


Q ss_pred             eecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         247 ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       247 ~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ........+.|.++...+.+.|+|.|.|..|...
T Consensus       239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~  272 (289)
T 3ejj_X          239 NYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRT  272 (289)
T ss_dssp             SSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEE
T ss_pred             ceEEeeEEEEEEeecccCCEEEEEEEEcCCCCcc
Confidence            0112246799999999999999999999998654

>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.30  E-value=1.1e-11  Score=107.82  Aligned_cols=89  Identities=20%  Similarity=0.294  Sum_probs=72.6

Q ss_pred             CCCCCeEEcC--CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee--ec--ceEEEEeee--cCCeEEE
Q psy8771         101 RRVPPQFSIP--PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP--VG--RNVLTLDRV--TESENYT  172 (904)
Q Consensus       101 ~~~~P~~~~~--~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~--~~--~~~l~i~~l--~d~g~Y~  172 (904)
                      +..+|.|...  +...+.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+. ..++.  ..  ...|.|.++  +|+|.|+
T Consensus        18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~-g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~   95 (118)
T 2e7c_A           18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKG-GAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYE   95 (118)
T ss_dssp             CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEET-TEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEE
T ss_pred             eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEEC-CEECC-CCcEEEEECCCeEEEEECCCChhcCEEEE
Confidence            4568888653  22339999999999999999999999999999 66665 23333  22  446999999  6999999


Q ss_pred             EEEEecCcceEEEEEEEEE
Q psy8771         173 CIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|.|..|..+..+.|.|.
T Consensus        96 C~a~N~~G~~~~~~~l~V~  114 (118)
T 2e7c_A           96 LSVQIENMKDTATIRIRVV  114 (118)
T ss_dssp             EEEECSSCEECCEEEEEEE
T ss_pred             EEEEeCCCeEEEEEEEEEE
Confidence            9999999999999999988

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C

Probab=99.30  E-value=9.7e-12  Score=123.53  Aligned_cols=181  Identities=18%  Similarity=0.281  Sum_probs=116.4

Q ss_pred             CCCCeEEcCC----CCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc-----eeecceEEEEeee--cCCeE
Q psy8771         102 RVPPQFSIPP----PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-----LPVGRNVLTLDRV--TESEN  170 (904)
Q Consensus       102 ~~~P~~~~~~----~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~-----~~~~~~~l~i~~l--~d~g~  170 (904)
                      ..+|.|...+    .. ..+.+|+++.|.|.+.|.|.+.|.|+|+ +..+....+     ...+...|.|.++  +|+|.
T Consensus        13 ~~~P~~~~~~~~~~~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~   90 (231)
T 3ojm_B           13 KRAPYWTNTEKMEKRL-HAVPAANTVKFRCPAGGNPMPTMRWLKN-GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGN   90 (231)
T ss_dssp             CEEEEESCGGGGCCSC-EEEETTSCEEEECCEEEESCCEEEEEET-TEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEE
T ss_pred             ccCCccccccccCcee-EEEccCCCEEEEEecccCCCCeEEEEEC-CccccccccccceeeecCcceEEEecCCcccCEE
Confidence            4567776665    45 8999999999999999999999999999 666644332     2235568999999  69999


Q ss_pred             EEEEEEecCcceEEEEEEEEEeecCC-CCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEe----CCC-----
Q psy8771         171 YTCIAASVLGVIETSTIVKVQCKYAP-LLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKP----KAA-----  240 (904)
Q Consensus       171 Y~c~a~n~~g~~~~~~~l~v~~~~~~-~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~----~~~-----  240 (904)
                      |+|.+.|..|.......|.|...... .......|....+..  ...+.|.+...+.+...  +.|..    .+.     
T Consensus        91 Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~--g~~~~l~C~~~~~p~p~--v~W~~~~~~~g~~~~~~  166 (231)
T 3ojm_B           91 YTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVV--GGDVEFVCKVYSDAQPH--IQWIKHVEKNGSKYGPD  166 (231)
T ss_dssp             EEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEET--TCCEEEECCEECSSCCE--EEEEEECCBTTBSBCTT
T ss_pred             EEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEe--CCcEEEEEEEecCCCCE--EEEEECCCCCCccccCC
Confidence            99999999999888888888721110 000111233443332  34456655543322222  33332    110     


Q ss_pred             CCCeEE-e-----ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771         241 NTPYSE-I-----SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT  288 (904)
Q Consensus       241 ~~~~~~-~-----~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~  288 (904)
                      ...... .     .......+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~  220 (231)
T 3ojm_B          167 GLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVL  220 (231)
T ss_dssp             SCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             CcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEe
Confidence            011111 0     11223569999999999999999999999875433333343

>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}

Probab=99.30  E-value=7.6e-12  Score=105.17  Aligned_cols=88  Identities=22%  Similarity=0.375  Sum_probs=74.2

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc--eee-cc--eEEEEeee--cCCeEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK--LPV-GR--NVLTLDRV--TESENYTCI  174 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~--~~~-~~--~~l~i~~l--~d~g~Y~c~  174 (904)
                      ..||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....+  +.. .+  ..|.|.++  +|+|.|+|.
T Consensus         3 ~~~P~~~~~p~~-~~~~~G~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~   80 (100)
T 2kdg_A            3 MGPPRFIQVPEN-MSIDEGRFCRMDFKVSGLPAPDVSWYLN-GRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACV   80 (100)
T ss_dssp             CEEEECCCCCCC-EEEETTCCEEEEEECEEESCCEEEEEET-TEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEE
T ss_pred             CCCCeEEeCCCC-EEecCCCEEEEEEEEEeeCCCEEEEEEC-CEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEE
Confidence            457888888888 9999999999999999999999999999 666655432  222 23  38999998  699999999


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.|..|..+..+.|.|.
T Consensus        81 a~n~~g~~~~~~~l~V~   97 (100)
T 2kdg_A           81 AKNRAGEATFTVQLDVL   97 (100)
T ss_dssp             EEETTEEEEEEEEEEEE
T ss_pred             EEcCCCeEEEEEEEEEE
Confidence            99999999999999887

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R

Probab=99.30  E-value=2.5e-11  Score=127.12  Aligned_cols=189  Identities=15%  Similarity=0.173  Sum_probs=122.3

Q ss_pred             CcceeeeccceEEEEecC-----CCCCcc---e-eeEeeCCCCCCCCcEEEe------ccCCceEEEEeCCCCC------
Q psy8771           2 DTRCYVESPEEVFIILCP-----LPPLIP---G-YILVTEPGTAPRDVQVRP------LSSSTMVIQWDEPETP------   60 (904)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~-----~~p~~~---~-~~~~~~p~~~p~~l~~~~------~~~~s~~v~W~~~~~~------   60 (904)
                      .|+|.+.+......+-..     .+|.+.   . ........+....|.|..      .+.+.+.|.|.+....      
T Consensus        76 ~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~  155 (315)
T 1itb_B           76 HYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI  155 (315)
T ss_dssp             CCEECCCSSSCCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSS
T ss_pred             EEEEEEeCCceEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccc
Confidence            589999987643333222     333321   1 111111222444555554      5677889999765311      


Q ss_pred             -----CCceecccccccccceEEEEeeeccCCeee----eeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc
Q psy8771          61 -----NGQITHPPTRAARSHARLAAQSVLRRGRLA----HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG  131 (904)
Q Consensus        61 -----~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g  131 (904)
                           ++.+........+.....|...+...|...    ...+.+.......+|.|...+.+.+.+.+|+.+.|.|.+.|
T Consensus       156 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g  235 (315)
T 1itb_B          156 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTG  235 (315)
T ss_dssp             SEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEE
T ss_pred             eEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEec
Confidence                 233444444445555555666544455442    22233333334688999888775468999999999999999


Q ss_pred             CCCCeEEEeeCCccccCCCCce------ee----------cceEEEEeee--cC-CeEEEEEEEecCcceEEEEEEEEE
Q psy8771         132 SPMPFVKWRKGQNIELTPDDKL------PV----------GRNVLTLDRV--TE-SENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       132 ~p~p~i~W~k~~~~~~~~~~~~------~~----------~~~~l~i~~l--~d-~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      .|.|.|.|+++ |..+....+.      ..          ..+.|.|.++  +| +|.|+|.|.|..|.....+.|.|.
T Consensus       236 ~P~p~i~W~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~  313 (315)
T 1itb_B          236 QLSDIAYWKWN-GSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP  313 (315)
T ss_dssp             CTTSEEEEEET-TEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred             CCCCeeEEEEC-CEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence            99999999999 7766654321      11          2348999998  68 999999999999999999888875

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}

Probab=99.30  E-value=2.9e-11  Score=101.42  Aligned_cols=89  Identities=27%  Similarity=0.427  Sum_probs=74.4

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      .+|.+|++...+.+++.|+|++|.  ..||.+.+|.|+|...+.... .....+. ..++++|.+|+|++.|.|+|+|.|
T Consensus         9 ~~P~~l~v~~~t~~Sv~lsW~~p~--~~~g~i~~Y~v~y~~~~~~~~-~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~   85 (103)
T 3t04_D            9 SVPTKLEVVDATPTSLKISWDAYY--SSWQNVKYYRITYGETGGDSP-VQEFTVPGYYSTATISGLKPGVDYTITVYAYD   85 (103)
T ss_dssp             CCCCSCEEEEEETTEEEEECTTTT--TTSCCCCEEEEEEEETTCSSC-CEEEEEETTCCEEEECSCCTTCCEEEEEEEES
T ss_pred             CCCceeEEEecCCCEEEEEccCCC--CCCCccceEEEEEEECCCCCc-cEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence            378999999999999999999984  468899999999998754322 2334455 889999999999999999999999


Q ss_pred             C--CCCCCCCCcEEee
Q psy8771         797 S--IGDGPSSYPITIR  810 (904)
Q Consensus       797 ~--~g~g~~s~~~~~~  810 (904)
                      .  .|.|+ |.++.+.
T Consensus        86 ~~~~G~~~-S~p~~~~  100 (103)
T 3t04_D           86 TFFPGYEP-NSPISIN  100 (103)
T ss_dssp             CCCTTCCC-SCCEEEE
T ss_pred             CCCCCCCC-CCCEEEe
Confidence            9  89888 8777653

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*

Probab=99.30  E-value=1.6e-11  Score=120.59  Aligned_cols=173  Identities=18%  Similarity=0.302  Sum_probs=114.1

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC----CceeecceEE----EEeee--cCCeEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD----DKLPVGRNVL----TLDRV--TESENY  171 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~----~~~~~~~~~l----~i~~l--~d~g~Y  171 (904)
                      ..||.|...|.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+...    .++...++.+    .|.++  +|+|.|
T Consensus         7 ~~~P~i~~~p~~-~~v~~G~~v~L~C~~~g~p~~~v~W~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y   84 (217)
T 2vr9_A            7 YQSPRIIEHPTD-LVVKKNEPATLNCKVEGKPEPTIEWFKD-GEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY   84 (217)
T ss_dssp             CCCCEEEECCCC-EEECTTSCEEECCEEECSSCCEEEEEET-TEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred             cCCCEEecCCCc-eEEeCCCcEEEEEEcCCCCCCeEEEEEC-CcCccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence            678999999988 9999999999999999999999999999 6665442    3444444444    46666  699999


Q ss_pred             EEEEEecCcceE-EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeC-CCccceEEEEEEEeCCCC--------
Q psy8771         172 TCIAASVLGVIE-TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY-PSETLLYYVIQYKPKAAN--------  241 (904)
Q Consensus       172 ~c~a~n~~g~~~-~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~-~~~~~~~y~v~~~~~~~~--------  241 (904)
                      +|.|.|..|... ..+.|.|......   ....|....+  .....+.|.+.. .+.+...  +.|...+..        
T Consensus        85 ~C~~~n~~g~~~~~~~~l~v~~~~~~---~~~~~~~~~~--~~g~~v~l~C~~~~g~p~~~--v~W~~~g~~~~~~~~~~  157 (217)
T 2vr9_A           85 WCVAKNRVGQAVSRHASLQIAVLRDD---FRVEPKDTRV--AKGETALLECGPPKGIPEPT--LIWIKDGVPLDDLKAMS  157 (217)
T ss_dssp             EEEEEETTEEEECCCEEEEECEECCS---CSBCCCCEEE--CTTSCEEECCBCCCEESCCE--EEEEETTEEECCCCCC-
T ss_pred             EEEEecCCCccccccceEEEEEeCCC---cEECCCccEE--cCCCeEEEEEECCCCCCCCe--EEEEECCcCCCcccccc
Confidence            999999988753 3566666522111   1112333333  234456666665 2222222  334332210        


Q ss_pred             ----CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeE
Q psy8771         242 ----TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAV  286 (904)
Q Consensus       242 ----~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~  286 (904)
                          .... .  .....+.|.++...+.+.|+|.|.|..|....+....
T Consensus       158 ~~~~~~~~-~--~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~l  203 (217)
T 2vr9_A          158 FGASSRVR-I--VDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKL  203 (217)
T ss_dssp             --CCCSEE-E--ETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEE
T ss_pred             cccCCcEE-e--cCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEE
Confidence                1111 1  1235799999999999999999999999765444333

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.30  E-value=2e-11  Score=103.96  Aligned_cols=102  Identities=21%  Similarity=0.360  Sum_probs=81.8

Q ss_pred             cCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEE
Q psy8771         477 KQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIR  555 (904)
Q Consensus       477 ~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~  555 (904)
                      ....| .+|. +.+...+.+++.|+|++|.+.++.+.+|.|+|+..+.   ..|.... ....+++.|.+|.|++.|.|+
T Consensus         4 ~~~~P-~~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~   78 (107)
T 2dn7_A            4 GSSGP-GRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADE---ARPNTIDFGKDDQHFTVTGLHKGTTYIFR   78 (107)
T ss_dssp             CCCCC-CCCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTC---SSCEEEEEETTCCEEEEECCCTTCEEEEE
T ss_pred             CCCCC-CCCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCC---CCCEEEEeCCCccEEEeCCCCCCCEEEEE
Confidence            34455 4555 7777778999999999998778899999999998764   3444433 366778999999999999999


Q ss_pred             EEEEeCCCCCCCCCcEEEecCCCCCCCCC
Q psy8771         556 VQAFTSVGPGPLSAPVLVKTQQGVPSQPR  584 (904)
Q Consensus       556 V~a~~~~g~~~~S~~~~~~t~~~~p~~p~  584 (904)
                      |+|+|..|.|.+|. ..+.|....|.+|.
T Consensus        79 V~A~n~~G~g~~s~-~~~~T~~~~P~~p~  106 (107)
T 2dn7_A           79 LAAKNRAGLGEEFE-KEIRTPEDLSGPSS  106 (107)
T ss_dssp             EEEEETTEEEEEEE-EEEECCCCCCCCCC
T ss_pred             EEEEcCCcccCCee-eEEeCCCCCCCCCC
Confidence            99999999998887 56788777777664

>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}

Probab=99.30  E-value=1.9e-11  Score=118.35  Aligned_cols=86  Identities=17%  Similarity=0.204  Sum_probs=72.9

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceeec--ceEEEEeee--cCCeEEEEEEEe
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPVG--RNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~~--~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      .+|.|...+ + ..+.+|+.+.|.|.+.|. |.|.|+|+|+ +..+..+.++...  ...|.|.++  +|+|.|+|.|.|
T Consensus       116 ~~P~~~~~~-~-~~v~~g~~v~l~C~v~g~~P~p~i~W~k~-g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N  192 (207)
T 3rbs_A          116 QGPHFVEYL-S-WEVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKD  192 (207)
T ss_dssp             TSSEEEEEE-E-EEEETTTEEEEEEEEESCCTTCEEEEEET-TEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEE
T ss_pred             CCCceEecC-C-cEEcCCCcEEEEEEEeCCCCCCEEEEEEC-CEECCCCCceEcCCCEEEEEECCCCcccCEEEEEEEEc
Confidence            478888766 4 889999999999999999 9999999999 7777666665543  347999999  799999999999


Q ss_pred             cCcceEEEEEEEEE
Q psy8771         178 VLGVIETSTIVKVQ  191 (904)
Q Consensus       178 ~~g~~~~~~~l~v~  191 (904)
                      ..|...+++.|.+.
T Consensus       193 ~~G~~~~~~~L~~~  206 (207)
T 3rbs_A          193 DRGKDKSRLKLVDE  206 (207)
T ss_dssp             TTEEEEEEEEECCC
T ss_pred             CCCEEEEEEEEecC
Confidence            99999998888653

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R

Probab=99.29  E-value=9.5e-12  Score=148.35  Aligned_cols=171  Identities=19%  Similarity=0.186  Sum_probs=63.0

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEcc--CCCCeEEEeeCCccccCCCCce------------eecceEEEEeee--cC
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVG--SPMPFVKWRKGQNIELTPDDKL------------PVGRNVLTLDRV--TE  167 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g--~p~p~i~W~k~~~~~~~~~~~~------------~~~~~~l~i~~l--~d  167 (904)
                      +|.+...|...+.+.+|+.++|.|.+.|  .|.+.|.|+++ +..+......            ......|.|.++  +|
T Consensus       223 ~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d  301 (772)
T 3v2a_R          223 IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYP-SSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSD  301 (772)
T ss_dssp             EEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC---------CEEEEC-----CCCEEEEEEEEESSCCSTT
T ss_pred             cceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecC-CccCCCceeeeccccccccccceEEEEEEEECcCCcCC
Confidence            3444444443379999999999999998  45678999999 5444332211            224557999998  69


Q ss_pred             CeEEEEEEEecCcceEEEEEEEEEeecCCCCCC-CCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE
Q psy8771         168 SENYTCIAASVLGVIETSTIVKVQCKYAPLLTL-PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE  246 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~-P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~  246 (904)
                      +|.|+|.+.|..|..+..+.|.|..  .|.... +..+..+.+...  ..++|.+...+.+..  .+.|...+.......
T Consensus       302 ~G~Y~C~~~~~~~~~~~~~~l~V~~--~p~~~~~~~~~~~~~v~~G--~~v~l~C~~~~~p~~--~v~W~~~g~~l~~~~  375 (772)
T 3v2a_R          302 QGLYTCAASSGLMTKKNSTFVRVHE--KPFVAFGSGMESLVEATVG--ERVRIPAKYLGYPPP--EIKWYKNGIPLESNH  375 (772)
T ss_dssp             CSEEEEEEECSSCEEEEEEEEEEEC--CCC--------------------------------------------------
T ss_pred             CeEEEEEEEcCCcceeEEEEEEEeC--CCeeEeccCCCCcEEEcCC--CcEEEEEEEeeeCCC--eEEEEECCEeCCCCc
Confidence            9999999999999888888888872  111111 111122323322  344555544322222  233333221111000


Q ss_pred             eecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771         247 ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS  282 (904)
Q Consensus       247 ~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s  282 (904)
                      .. .....+.|.++...+.+.|+|.|.|..|....+
T Consensus       376 ~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s  410 (772)
T 3v2a_R          376 TI-KAGHVLTIMEVSERDTGNYTVILTNPISKEKQS  410 (772)
T ss_dssp             ------------------------------------
T ss_pred             eE-ccceeEEEecCChhcCceEEEEEEECCcCeEEE
Confidence            01 123678999999999999999999998865433

>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A

Probab=99.29  E-value=6.5e-11  Score=115.67  Aligned_cols=154  Identities=16%  Similarity=0.268  Sum_probs=110.7

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCC----C----------CC--ceecccccc-cccceEEEEeeeccCC-eeeeeeeecc
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPET----P----------NG--QITHPPTRA-ARSHARLAAQSVLRRG-RLAHAVRQVA   97 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~----~----------~g--~i~~~~~~~-~~~~~~~~~~~~~~~g-~~~~~~~~v~   97 (904)
                      ....|.|...+.+.+.|.|.+...    .          +|  .+....... .+.....|...+.... ....+.+.+.
T Consensus        22 ~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~  101 (212)
T 2yd1_A           22 GVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIY  101 (212)
T ss_dssp             SCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEE
T ss_pred             CEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEe
Confidence            566777777777888999976521    1          22  133333344 4444555555544433 3445555554


Q ss_pred             CCC--CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceeecceEEEEeee--cCCeEEE
Q psy8771          98 DPV--RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPVGRNVLTLDRV--TESENYT  172 (904)
Q Consensus        98 ~~~--~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~~~~~l~i~~l--~d~g~Y~  172 (904)
                      ...  ...+|.|...+.. ..+..|+.+.|.|.+.|.|.|.|.|+++ +..+.. ..++...++.|.|.++  +|+|.|+
T Consensus       102 ~~~~~~~~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~  179 (212)
T 2yd1_A          102 EGDKTPAGFPVITQGPGT-RVIEVGHTVLMTCKAIGNPTPNIYWIKN-QTKVDMSNPRYSLKDGFLQIENSREEDQGKYE  179 (212)
T ss_dssp             CTTCSCTTCCEEEECCCC-EEEETTCCEEECCEEECSSCCEEEEEET-TEECCTTSTTEEEETTEEEECSCCGGGCEEEE
T ss_pred             cccCCCCCCCeeEeCCCc-eEeecCCeEEEEEEeccCCCCeEEEEEC-CeEcccCCCeEEccCCeEEEccCChhhCEEEE
Confidence            321  1234888888877 8999999999999999999999999999 555543 5667777889999999  6999999


Q ss_pred             EEEEecCcceEEE-EEEEEE
Q psy8771         173 CIAASVLGVIETS-TIVKVQ  191 (904)
Q Consensus       173 c~a~n~~g~~~~~-~~l~v~  191 (904)
                      |.|.|..|...+. +.|.|.
T Consensus       180 C~a~N~~G~~~s~~~~l~V~  199 (212)
T 2yd1_A          180 CVAENSMGTEHSKATNLYVK  199 (212)
T ss_dssp             EEEEETTEEEECCCEEEEEE
T ss_pred             EEeecCCCceeEEEEEEEEE
Confidence            9999999998765 789998

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=9.3e-12  Score=106.12  Aligned_cols=97  Identities=20%  Similarity=0.392  Sum_probs=78.6

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      .|..++.++....++.+++.|+|++|.+.++.+.+|.|+|+....   ..|........+.+.+.+|.|++.|.|+|+|+
T Consensus         9 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~   85 (110)
T 2db8_A            9 VPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNG---GQFREVYVGKETMCTVDGLHFNSTYNARVKAF   85 (110)
T ss_dssp             CCCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSS---SCCEEEEEESCSCEEEECCCSSSCCEEEEEEE
T ss_pred             CCCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCC---CceEEEEeCCcCEEEECCCCCCCEEEEEEEEE
Confidence            444444455555567899999999998777899999999987543   45766665677889999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecCCCC
Q psy8771         560 TSVGPGPLSAPVLVKTQQGV  579 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~~~~  579 (904)
                      |..|.|.+|..+.+.|....
T Consensus        86 n~~G~s~~S~~~~~~T~~~p  105 (110)
T 2db8_A           86 NKTGVSPYSKTLVLQTSEGS  105 (110)
T ss_dssp             CSSCBCCCCSCEECCCCCCC
T ss_pred             eCCcCCCCCCCEEEEcCCCC
Confidence            99999999999988886543

>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A

Probab=99.29  E-value=9.8e-11  Score=112.88  Aligned_cols=161  Identities=12%  Similarity=0.117  Sum_probs=106.9

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC---CCceeecceEEEEeee--cCCeEEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP---DDKLPVGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~---~~~~~~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ..+|.|...|.  ..+.+|++++|.|.+.|.|. .+.|+|+ +..+..   ..+.....+.|.|.++  +|+|.|+|.|.
T Consensus         3 ~~~P~i~~~p~--~~v~~G~~v~L~C~~~~~~~-~~~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~   78 (198)
T 1ugn_A            3 LPKPTLWAEPG--SVITQGSPVTLRCQGGQETQ-EYRLYRE-KKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYG   78 (198)
T ss_dssp             CCCCEEEEESC--SEEETTCCEEEEEECCTTCC-CEEEEES-SSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEE
T ss_pred             CCCCeEeccCC--CcccCCCcEEEEEEecCCCc-EEEEEEC-CccccccccccccCCcccEEEECCCCHHHCeEEEEEEE
Confidence            35788887775  57889999999999999987 6999999 554421   1112235678999999  69999999999


Q ss_pred             ecC-c--ceEEEEEEEEEeecCCCCCCCCCCcceEE----EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe-E-E-
Q psy8771         177 SVL-G--VIETSTIVKVQCKYAPLLTLPVAPLDVKI----SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY-S-E-  246 (904)
Q Consensus       177 n~~-g--~~~~~~~l~v~~~~~~~~~~P~~p~~l~~----~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~-~-~-  246 (904)
                      |.. |  ..+..+.|.|.       ..+.+|. +..    .......++|.+...+. ..  .+.|...+..... . . 
T Consensus        79 n~~~g~~~~s~~~~l~V~-------~~~~~p~-i~~~~~~~v~~G~~v~L~C~~~~~-~~--~v~W~k~g~~~~~~~~~~  147 (198)
T 1ugn_A           79 SDTAGRSESSDPLELVVT-------GAYIKPT-LSAQPSPVVNSGGNVTLQCDSQVA-FD--GFILCKEGEDEHPQCLNS  147 (198)
T ss_dssp             ETTTEECCCCCCEEEEEE-------CSSCCCE-EEEESCSEEETTCCEEEEEECSSC-CS--EEEEEEC------CEEEC
T ss_pred             CCCCCcccCCccEEEEEc-------ccccCCc-cccCCccccCCCCcEEEEEecCCC-Cc--EEEEEECCCccCCccccc
Confidence            987 6  34566777777       3222221 111    11234577888877644 22  3445444322110 0 0 


Q ss_pred             ---eecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         247 ---ISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       247 ---~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                         ..+.....|.|.++...+.+.|+|.|.|..+
T Consensus       148 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~  181 (198)
T 1ugn_A          148 QPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS  181 (198)
T ss_dssp             ------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred             cccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence               1122347899999999999999999999876

>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}

Probab=99.29  E-value=4.9e-11  Score=114.79  Aligned_cols=160  Identities=11%  Similarity=0.091  Sum_probs=103.3

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc---eeecceEEEEeee--cCCeEEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK---LPVGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~---~~~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ..+|.|...|.  ..+.+|++++|.|.+.|.|. .+.|+|+ +..+....+   .....+.|.|.++  +|+|.|+|.|.
T Consensus         3 ~~~P~i~~~p~--~~v~~G~~v~L~C~~~~~~~-~~~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~   78 (196)
T 2d3v_A            3 LSKATLWAEPG--SVISRGNSVTIRCQGTLEAQ-EYRLVKE-GSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYY   78 (196)
T ss_dssp             CCBCEEEEESC--SEEETTCCEEEEEECCTTCC-EEEEEET-TCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred             CCCCEEEeCCC--CcccCCCeEEEEEeCCCCCc-EEEEEEC-CCCCCcccccccCCccccEEEeccCChhHCeEEEEEEe
Confidence            35788888776  47889999999999999887 8999999 555533211   2235678999999  69999999999


Q ss_pred             ecCcce--EEEEEEEEEeecCCCCCCCCCCc-----ceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE---
Q psy8771         177 SVLGVI--ETSTIVKVQCKYAPLLTLPVAPL-----DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE---  246 (904)
Q Consensus       177 n~~g~~--~~~~~l~v~~~~~~~~~~P~~p~-----~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~---  246 (904)
                      |..|..  +..+.|.|.       ..+.+|.     ...+.  ....++|.+...+.+ .  .+.|...+.......   
T Consensus        79 n~~g~~~~s~~~~l~V~-------~~~~~p~i~~~~~~~v~--~G~~v~L~C~~~~~p-~--~~~W~k~g~~~~~~~~~~  146 (196)
T 2d3v_A           79 SPAGWSEPSDPLELVVT-------GFYNKPTLSALPSPVVT--SGENVTLQCGSRLRF-D--RFILTEEGDHKLSWTLDS  146 (196)
T ss_dssp             ETTEECBCCCCEEEEEE-------CSSCCCEEEC-------------CEEEEEESSCC-S--EEEEEEC---CCEEEEEC
T ss_pred             CCCCcCCcCccEEEEec-------CCCCCCeEEccCCcccc--CCCcEEEEEEcCCCC-C--EEEEEccCCccccccccc
Confidence            987753  345677776       2211221     11122  234566777665444 2  344544432221111   


Q ss_pred             -e--ecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         247 -I--SGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       247 -~--~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                       .  .+.....|.|.++++.+.+.|+|.|.|..+
T Consensus       147 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~  180 (196)
T 2d3v_A          147 QLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI  180 (196)
T ss_dssp             EECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred             ccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence             1  123347899999999999999999999764

>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4

Probab=99.29  E-value=1.3e-11  Score=105.88  Aligned_cols=86  Identities=17%  Similarity=0.216  Sum_probs=70.0

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccC---CCCeEEEeeCCccccC--CCCceee----------cceEEEEeee--cC
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGS---PMPFVKWRKGQNIELT--PDDKLPV----------GRNVLTLDRV--TE  167 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~---p~p~i~W~k~~~~~~~--~~~~~~~----------~~~~l~i~~l--~d  167 (904)
                      |.|+..|.+ +.+.+|++++|.|.+.|.   |.|.|.|+|++-..+.  ...++.+          ...+|+|.++  +|
T Consensus         8 ~~F~~~P~~-v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D   86 (126)
T 2dav_A            8 ILFIEKPQG-GTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF   86 (126)
T ss_dssp             CSCCSCCCC-CEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred             cEEEEcCCC-eEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence            557888888 999999999999999886   8999999998311111  1233332          2578999999  69


Q ss_pred             CeEEEEEEEecCcceEEEEEEEEE
Q psy8771         168 SENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +|.|+|.|.|..|..++.+.|.|.
T Consensus        87 aG~Y~Cevsn~~g~~~~~~~L~V~  110 (126)
T 2dav_A           87 AGNYRCEVTYKDKFDSCSFDLEVH  110 (126)
T ss_dssp             CEEEEEEEECSSCEEEECCEEEEE
T ss_pred             CEEEEEEEEeCCCcEEEEEEEEEE
Confidence            999999999999999999999999

>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}

Probab=99.29  E-value=2.2e-10  Score=116.24  Aligned_cols=218  Identities=13%  Similarity=0.068  Sum_probs=135.6

Q ss_pred             CCCCcEEEeccCCce-EEEEeCCCC----CCCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcC
Q psy8771          36 APRDVQVRPLSSSTM-VIQWDEPET----PNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIP  110 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~-~v~W~~~~~----~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~  110 (904)
                      ....|.|...+.+.. .+.|.+...    .++.+........+.....|...+...  ...+.+.+.     .+|.+. .
T Consensus        17 ~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~--s~~~~l~v~-----~~~~~~-~   88 (262)
T 3rjd_A           17 ETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGR--SDPIQLEIH-----RGWLLL-Q   88 (262)
T ss_dssp             CCEEEEEECSSCCCTTCEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEESSSCC--CCCEEEEEE-----CSSEEE-E
T ss_pred             CeEEEEEECCCCCCCceEEEEECCEEeeccCCeEEEecCCcccCeEEEEEEecCCc--cccEEEEEe-----ccceEe-c
Confidence            344455554444444 899987531    233344444445554444555443221  223344432     233333 3


Q ss_pred             CCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         111 PPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      +.. ..+.+|+.+.|.|.+ .|.|.+.+.|+++ +..+.    .....+.|.|.++  +|+|.|+|.|.|..+..+....
T Consensus        89 ~~~-~~~~~g~~v~l~C~~~~~~p~~~v~W~~~-g~~~~----~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~  162 (262)
T 3rjd_A           89 VSS-RVFTEGEPLALRCHAWKDKLVYNVLYYRN-GKAFK----FFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGIS  162 (262)
T ss_dssp             ESC-SEEETTSCEEEEEEEGGGCCCEEEEEEET-TEEEE----EEEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEE
T ss_pred             CCC-eEEecCCeEEEEEEccCCCCCceEEEEEC-Ccccc----ccCCCCeEEEEECChhhCEEEEEEEeCCCCccccceE
Confidence            334 778899999999999 7889999999999 55442    2234678999998  6999999999999988888888


Q ss_pred             EEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCc---cceEEEEEEEeCCCCCCeEEeecceeceEEEcCC
Q psy8771         188 VKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSE---TLLYYVIQYKPKAANTPYSEISGIITTYYTVRNL  260 (904)
Q Consensus       188 l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~---~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L  260 (904)
                      |.|.       ..+.+|. +...    ......+.|.+...+.   +...+.+.|...+.  ...  .......+.|.++
T Consensus       163 l~V~-------~~~~~p~-~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~--~~~--~~~~~~~L~i~~v  230 (262)
T 3rjd_A          163 VTVK-------ELFPAPV-LNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSK--TLR--GRNTSSEYQILTA  230 (262)
T ss_dssp             EEEE-------CSSCCCE-EEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETTE--EEE--EEESCCEEEESSC
T ss_pred             EEec-------cCCCCCe-EeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCc--Eec--ccCCCceEEEEEe
Confidence            8888       3222221 1111    1234567777776532   23344555655421  111  1223467999999


Q ss_pred             CCCCeEEEEEEEEcCCCCC
Q psy8771         261 SPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       261 ~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.+.|+|.|.|..|..
T Consensus       231 ~~~d~G~Y~C~a~n~~G~~  249 (262)
T 3rjd_A          231 RREDSGLYWCEAATEDGNV  249 (262)
T ss_dssp             CGGGCEEEEEEEEETTSSC
T ss_pred             chhhCeEEEEEEEcccCce
Confidence            9999999999999999863

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}

Probab=99.29  E-value=3.7e-11  Score=120.21  Aligned_cols=174  Identities=22%  Similarity=0.342  Sum_probs=110.9

Q ss_pred             CCCCeEEcCCC---CceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC-----ceeecceEEEEeee--cCCeEE
Q psy8771         102 RVPPQFSIPPP---ALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD-----KLPVGRNVLTLDRV--TESENY  171 (904)
Q Consensus       102 ~~~P~~~~~~~---~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~-----~~~~~~~~l~i~~l--~d~g~Y  171 (904)
                      ..+|.|..++.   ..+.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+....     .......+|.|.++  +|+|.|
T Consensus         9 ~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y   87 (241)
T 3grw_A            9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKN-GREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNY   87 (241)
T ss_dssp             --CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEET-TEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEE
T ss_pred             CCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEEC-CcccCCCCcccceeeeccceEEEEEeCCcccCEEE
Confidence            45777765532   238999999999999999999999999999 66554332     23345678999999  699999


Q ss_pred             EEEEEecCcceEEEEEEEEEeecCCC-CCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEe----CCC-----C
Q psy8771         172 TCIAASVLGVIETSTIVKVQCKYAPL-LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKP----KAA-----N  241 (904)
Q Consensus       172 ~c~a~n~~g~~~~~~~l~v~~~~~~~-~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~----~~~-----~  241 (904)
                      +|.+.|..|.......|.|....... ......+....+.  ....++|.+...+.+..  .+.|..    .+.     +
T Consensus        88 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~--~g~~v~L~C~~~~~p~p--~v~W~~~~~~~g~~~~~~~  163 (241)
T 3grw_A           88 TCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAV--LGSDVEFHCKVYSDAQP--HIQWLKHVEVNGSKVGPDG  163 (241)
T ss_dssp             EEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECC--TTCCEEEEEEEECSSCC--EEEEEEECCSSSCSSCTTT
T ss_pred             EEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceec--CCCEEEEEEEEecCCCC--EEEEEEcccCCCcccCCCC
Confidence            99999999998888888887211000 0000012222222  23445555554322222  233333    111     1


Q ss_pred             CCeEEe-------ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         242 TPYSEI-------SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       242 ~~~~~~-------~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ......       .......+.|.++...+.+.|+|.|.|..|...
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~  209 (241)
T 3grw_A          164 TPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAE  209 (241)
T ss_dssp             CCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred             ceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEE
Confidence            111100       112346799999999999999999999988753

>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}

Probab=99.29  E-value=1.4e-11  Score=119.26  Aligned_cols=167  Identities=12%  Similarity=0.055  Sum_probs=101.8

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceee--cc--e--EEEEeee--cCCeEEEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPV--GR--N--VLTLDRV--TESENYTCI  174 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~--~~--~--~l~i~~l--~d~g~Y~c~  174 (904)
                      +|.|..+. + +.+.+|+.+.|.|.+. +.|.|.|+|+|| +..+..+.++.+  +.  +  +|.|.++  +|+|.|+|.
T Consensus         3 ~p~~~~~~-~-~~v~eg~~v~l~c~~~~~~P~p~i~W~kn-g~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~   79 (207)
T 3rbs_A            3 DPFTKSEL-A-VEILEKGQVRFWMQAEKLSGNAKVNYIFN-EKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ   79 (207)
T ss_dssp             ---CCEEE-E-EEECGGGCEEEEEECSCCCSCCEEEEEET-TEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEE
T ss_pred             CCeeecCC-c-eEEEeCCeEEEEEEEecCCCCCEEEEEEC-CEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEE
Confidence            35555544 4 8899999999999997 489999999999 777766655543  22  2  6999998  799999999


Q ss_pred             EEecCcceEEEEEEEEEeec-CC-----CCC-----CCCCCc---ceEEEeecCCeEEEEEeCCCc-cceEEEEEEEeCC
Q psy8771         175 AASVLGVIETSTIVKVQCKY-AP-----LLT-----LPVAPL---DVKISEVTATSVRLDWTYPSE-TLLYYVIQYKPKA  239 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~~~~-~~-----~~~-----~P~~p~---~l~~~~~~~~sv~l~W~~~~~-~~~~y~v~~~~~~  239 (904)
                      |.|  |.......+.+.... ..     ...     ...+|.   .+.........+.|.+...+. +...  |.|...+
T Consensus        80 a~N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~--i~W~k~g  155 (207)
T 3rbs_A           80 LQD--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETH--IVWYKDE  155 (207)
T ss_dssp             EEE--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCE--EEEEETT
T ss_pred             EEC--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCE--EEEEECC
Confidence            999  655554444321000 00     000     001221   111222334566666664433 2322  3343321


Q ss_pred             C----CCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         240 A----NTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       240 ~----~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      .    ...+  ........|.|.++.+.+.+.|+|.|.|..|..
T Consensus       156 ~~l~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~  197 (207)
T 3rbs_A          156 REISVDEKH--DFKDGICTLLITEFSKKDAGIYEVILKDDRGKD  197 (207)
T ss_dssp             EEECCCCCC--CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEE
T ss_pred             EECCCCCce--EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEE
Confidence            1    1111  112334579999999999999999999999864

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}

Probab=99.28  E-value=3.2e-11  Score=124.70  Aligned_cols=224  Identities=15%  Similarity=0.189  Sum_probs=134.0

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCCC---------CceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCe
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETPN---------GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQ  106 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~~---------g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~  106 (904)
                      ....|.|...+.    |.|..+....         +.+........+.....|...+........+.+.+.     .+|.
T Consensus        20 ~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~-----~~~~   90 (292)
T 4dkd_C           20 ATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVK-----DPAR   90 (292)
T ss_dssp             CCEEEEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEEC-----CSSC
T ss_pred             CcEEEEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEc-----Cccc
Confidence            444455544332    8998654331         134444445555555555555444444445555554     2333


Q ss_pred             -EEcCCCCceEEecCCCeEEEEEEccCCC--CeEEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         107 -FSIPPPALLEVMLDSPLNLSCVAVGSPM--PFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       107 -~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                       +...+.. +.+.+|+.+.|.|.+.| |.  +.|.|+++++..+....++.. .++.|.|.++  +|+|.|+|.|.|..|
T Consensus        91 ~~~~~~~~-~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~  168 (292)
T 4dkd_C           91 PWNVLAQE-VVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGR  168 (292)
T ss_dssp             CEEESCSE-EEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTS
T ss_pred             cccccCCe-EEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCC
Confidence             3445555 89999999999999998 55  789999985666666656554 4556999998  799999999999887


Q ss_pred             ceE-EEEEEEEEeecCCCCCCCC-CCcceEEEe-----ecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe---EEeec-
Q psy8771         181 VIE-TSTIVKVQCKYAPLLTLPV-APLDVKISE-----VTATSVRLDWTYPSETLLYYVIQYKPKAANTPY---SEISG-  249 (904)
Q Consensus       181 ~~~-~~~~l~v~~~~~~~~~~P~-~p~~l~~~~-----~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~---~~~~~-  249 (904)
                      ... ....|.|.       ..+. +|. +....     .....+.|.+...+.+ ..+.+.|...+.....   ..... 
T Consensus       169 ~~~s~~~~l~V~-------~~~~~~p~-i~~~~~~~~~~~g~~v~l~C~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~  239 (292)
T 4dkd_C          169 KVMSISIRLKVQ-------KVIPGPPA-LTLVPAELVRIRGEAAQIVCSASSVD-VNFDVFLQHNNTKLAIPQQSDFHNN  239 (292)
T ss_dssp             CEECCCEEEEEE-------CCCCSSCE-EEEESSCBCCCSSSCEEEEEEEEESS-SCCEEECCBSSCCCCCCBEEEEETT
T ss_pred             ceeEEEEEEEEe-------CCCCCCCe-EEccCCceeEecCCCEEEEEEecCCC-CceEEEEeCCCcccccCccceeccc
Confidence            654 47778887       2211 221 11110     1234455555543222 1233445443221111   11111 


Q ss_pred             --ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         250 --IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       250 --~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                        .....+.|.++...+.+.|+|.|.|..|..
T Consensus       240 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~  271 (292)
T 4dkd_C          240 RYQKVLTLNLDQVDFQHAGNYSCVASNVQGKH  271 (292)
T ss_dssp             EEEEEEEEEESSCCTTSCEEEEEEEECSSCEE
T ss_pred             eeeeEEEEEECccChhcCeEEEEEEecCCCCc
Confidence              123579999999999999999999998864

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.28  E-value=2.7e-11  Score=102.47  Aligned_cols=96  Identities=19%  Similarity=0.275  Sum_probs=77.5

Q ss_pred             EecCCCCCCCCCCcEEEecCCCEEEEEe--cCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCce
Q psy8771         710 RTKQYVPGAPPQNVSCEPLSSTSIRISW--EPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTE  787 (904)
Q Consensus       710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W--~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~  787 (904)
                      .|.+.+|. +|.+|++...+.++|.|+|  .+|  ...||. .+|.|+|+....   ......  ....++|.+|+|++.
T Consensus         4 ~T~~~~P~-~p~~l~~~~~~~~sv~l~W~~~~P--~~~ng~-~~Y~v~y~~~~~---~~~~~~--~~~~~~i~~L~p~t~   74 (107)
T 1x5a_A            4 GSSGAESL-SGLSLKLVKKEPRQLELTWAGSRP--RNPGGN-LSYELHVLNQDE---EWHQMV--LEPRVLLTKLQPDTT   74 (107)
T ss_dssp             TTTTCCCC-CSCCCCEEEEETTEEEEECCCCCS--SCCSSC-CEEEEEEECSSC---EEEEEE--SSSEEEEESCCSSCE
T ss_pred             cCCCCCCC-CCCceEEEecCCCEEEEEECCCCC--CCCCCc-eEEEEEEEeCCC---CceEEE--ecceEEECCCCCCCE
Confidence            46667777 4789999999999999999  877  467888 999999987611   112222  223399999999999


Q ss_pred             EEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771         788 YRIWVLAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       788 Y~~~V~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      |.|+|+|.|..|.|++|..+.++|.+.
T Consensus        75 Y~f~V~A~~~~G~g~~S~~~~~~T~~~  101 (107)
T 1x5a_A           75 YIVRVRTLTPLGPGPFSPDHEFRTSPP  101 (107)
T ss_dssp             EEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred             EEEEEEEECCCccCCCCCCEEEEECCC
Confidence            999999999999999999999999764

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1

Probab=99.28  E-value=3.4e-11  Score=101.77  Aligned_cols=95  Identities=22%  Similarity=0.387  Sum_probs=72.0

Q ss_pred             CCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCc-eeeEE
Q psy8771         577 QGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN-IISYE  655 (904)
Q Consensus       577 ~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~-~~~y~  655 (904)
                      .+.|.+|.++.+...+.+ +.|+|.+|..                                         .++. +.+|.
T Consensus         4 ~~~P~~P~~~~~~~~~~~-v~l~W~~P~~-----------------------------------------~~G~pi~~Y~   41 (105)
T 2haz_A            4 MDTPSSPSIDQVEPYSST-AQVQFDEPEA-----------------------------------------TGGVPILKYK   41 (105)
T ss_dssp             CCCCCCCEEEEEEECSSC-EEEEEECCSC-----------------------------------------CTTSCCCEEE
T ss_pred             CCCCcCCCCCEEEEcCCc-EEEEEcCCcc-----------------------------------------cCCccccEEE
Confidence            345666777777776666 7777777754                                         4555 88899


Q ss_pred             EEEEeCCccccceE--E---ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771         656 LYWNDTYAKAKHHR--R---IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ  713 (904)
Q Consensus       656 v~~~~~~~~~~~~~--~---~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~  713 (904)
                      |+|+..+...+...  .   ....+.++|.+|+|++.|.|+|+|+|..|.|.+|....++|.+
T Consensus        42 v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p  104 (105)
T 2haz_A           42 AEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP  104 (105)
T ss_dssp             EEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred             EEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence            99888765534211  1   1245789999999999999999999999999999999998863

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}

Probab=99.28  E-value=1.8e-10  Score=103.78  Aligned_cols=120  Identities=20%  Similarity=0.292  Sum_probs=93.5

Q ss_pred             ccceEEEeCCCCCcEEEEEEEEEcCC-CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEE
Q psy8771         673 LVETYSLTGLYPNTLYYIWLAAQSPR-GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVY  751 (904)
Q Consensus       673 ~~~~~~l~~L~p~t~Y~v~V~a~~~~-G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~  751 (904)
                      ..+++.+.+++ |+.|.|.++...-. +.+.        -....| .||.+|++..++.+++.|+|++|.  ..+| +.+
T Consensus       116 ~vts~~vgdg~-g~~~~~~~~~k~v~i~~~t--------q~ev~p-~Pp~NL~At~VT~tSVtLsW~aP~--~~~G-I~g  182 (238)
T 2w1n_A          116 SVTNSSVGDGE-GLVHEIAGTEKTVNIIEGT--------SPEIVV-NPVRDFKASEINKKNVTVTWTEPE--TTEG-LEG  182 (238)
T ss_dssp             EEEEEEEECTT-SCEEECBCEEEEEEEECCC--------CCCCCC-CCCEEEEEEEECSSCEEEEEECCS--CCTT-EEE
T ss_pred             ceeeEEEecCC-CcEEEeeccceeeeeccCC--------CCcCcc-CCCCceEEEEccCCeEEEEecCCC--CCCC-cee
Confidence            45788999999 99999988632210 1110        122234 589999999999999999999995  4556 999


Q ss_pred             EEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecC
Q psy8771         752 YKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTH  812 (904)
Q Consensus       752 Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~  812 (904)
                      |+|++..       .....+. +.++|++.+|+++|.|.|+|.|.+..|.+...+.+.++|.
T Consensus       183 Y~ly~~g-------~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl  237 (238)
T 2w1n_A          183 YILYKDG-------KKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA  237 (238)
T ss_dssp             EEEEETT-------EEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred             EEEEeCC-------ceeEEeeccceEEEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence            9999853       2334455 7789999999999999999999999999887888888884

>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}

Probab=99.28  E-value=1.6e-11  Score=102.95  Aligned_cols=88  Identities=22%  Similarity=0.389  Sum_probs=74.0

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-Cceee--cc--eEEEEeee--cCCeEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPV--GR--NVLTLDRV--TESENYTCI  174 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~--~~--~~l~i~~l--~d~g~Y~c~  174 (904)
                      ..||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+... .++..  +.  ..|.|.++  +|+|.|+|.
T Consensus         3 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~   80 (99)
T 1u2h_A            3 KAPPTFKVSLMD-QSVREGQDVIMSIRVQGEPKPVVSWLRN-RQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCK   80 (99)
T ss_dssp             CEEEEEEECCCC-EEEETTCCEEEEEEEEEESCCEEEEEET-TEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEE
T ss_pred             CCCCEEEEcCCc-eEecCCCEEEEEEEEEEcCCCEEEEEEC-CEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEE
Confidence            357889888888 8999999999999999999999999999 6666544 33332  22  27999998  699999999


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.|..|.....+.|.|.
T Consensus        81 a~N~~g~~~~~~~l~V~   97 (99)
T 1u2h_A           81 AVNEYGARQCEARLEVR   97 (99)
T ss_dssp             EEETTEEEEEEEEEEEE
T ss_pred             EEECCCceeEEEEEEEE
Confidence            99999999999888886

>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X

Probab=99.28  E-value=2.1e-11  Score=104.30  Aligned_cols=84  Identities=19%  Similarity=0.268  Sum_probs=67.6

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----------cceEEEEeee--cCC
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----------GRNVLTLDRV--TES  168 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----------~~~~l~i~~l--~d~  168 (904)
                      ..||.| .....    ..+..+.|.|.+.|.|.|.|+|+|+ |..+..+.++..           ..+.|.|.++  +|+
T Consensus         2 ~~pP~I-~l~~~----~~~~~~~l~c~v~G~P~P~I~W~kn-G~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~   75 (126)
T 1he7_A            2 HMPASV-QLHTA----VEMHHWCIPFSVDGQPAPSLRWLFN-GSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNN   75 (126)
T ss_dssp             CCCCCC-CCCCC----CCCCEEEEEEEECCSSCCEEEEEET-TEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGC
T ss_pred             CCCCEE-EccCC----ccCccEEEEEEEeeeCCCeEEEEEC-CEECCCCCceeEEEeeccccccccceEEEECcCCCCCC
Confidence            357776 32222    3678899999999999999999999 888877655421           1368999998  799


Q ss_pred             eEEEEEEEecCcceEEEEEEEEE
Q psy8771         169 ENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       169 g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|+|.|.|..|...+++.|.|.
T Consensus        76 G~YtC~A~N~~G~~~~t~~l~v~   98 (126)
T 1he7_A           76 GNYTLLAANPFGQASASIMAAFM   98 (126)
T ss_dssp             EEEEEEEEETTEEEEEEEEECCC
T ss_pred             EEEEEEEEECCCeEEEEEEEEEE
Confidence            99999999999999998888877

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.28  E-value=1.8e-11  Score=106.76  Aligned_cols=108  Identities=21%  Similarity=0.220  Sum_probs=87.9

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCC-CC------c--eeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEE
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHS-GE------N--IISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYY  689 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~-~~------~--~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~  689 (904)
                      .++...++.+.+++.++++|+|.++... ++      .  +..|.|.|...+.... ..+..+..++++|.+|+|++.|.
T Consensus        17 ~~s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~~~g~~ts~~v~~L~P~T~Y~   96 (137)
T 1wk0_A           17 LLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYH   96 (137)
T ss_dssp             HTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEEEEESCSEEEECSCCTTCEEC
T ss_pred             ccCCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEEEecCccEEEEcCCCCCCEEE
Confidence            3566788899999999999999998654 32      2  5899999977654333 34445777899999999999999


Q ss_pred             EEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec
Q psy8771         690 IWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL  728 (904)
Q Consensus       690 v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~  728 (904)
                      |+|+|+|..|.|.+|..+.|+|....|. +|..+++...
T Consensus        97 ~rV~A~n~~G~G~~S~~~~f~T~~~~P~-~P~~p~l~~~  134 (137)
T 1wk0_A           97 AKVQAEYNSIKGTPSEAEIFTTLSCEPD-IPNPPRISGP  134 (137)
T ss_dssp             EEEEEEETTEECCCCCCCCEECCCSSSC-CCSCSCCCSC
T ss_pred             EEEEEEeCCCcCCCCCCEEEECCCCCCC-CCCCCEEeCC
Confidence            9999999999999999999999999887 4677766543

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.28  E-value=2.2e-11  Score=105.79  Aligned_cols=101  Identities=23%  Similarity=0.332  Sum_probs=82.9

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a  558 (904)
                      .+|.+|.++.+...+.+++.|+|.++.+.++.+.+|.|+|+....  ...|..... ...+.+.+.+|.|++.|.|+|+|
T Consensus        14 ~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A   91 (117)
T 1uem_A           14 DLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSV--SNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRA   91 (117)
T ss_dssp             CSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTT--EEEEEEEEEEECSSEEEECSCCTTCEEEEEEEE
T ss_pred             CCccCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCC--CCceeEcccccCcCEEEECCCCCCCEEEEEEEE
Confidence            455789999999999999999999988666789999999988642  245655433 46778999999999999999999


Q ss_pred             EeCCCCCCCCCcEE-EecCCCCCCC
Q psy8771         559 FTSVGPGPLSAPVL-VKTQQGVPSQ  582 (904)
Q Consensus       559 ~~~~g~~~~S~~~~-~~t~~~~p~~  582 (904)
                      +|..|.|.+|.... ++|....|.+
T Consensus        92 ~n~~G~s~~S~~~~~v~t~~~~P~~  116 (117)
T 1uem_A           92 INPQGLSDPSPMSDPVRTQDSGPSS  116 (117)
T ss_dssp             EETTEEEEECCCCCCEECCCSSCCC
T ss_pred             ECCCccCCCcCCCccEEccCCCCCC
Confidence            99999988888776 7777666554

>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}

Probab=99.27  E-value=1.6e-10  Score=119.29  Aligned_cols=238  Identities=13%  Similarity=0.069  Sum_probs=139.4

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      ..||.|...+.+ +.+.+|++++|.|.+.|    .|.|+|+ +..+   ......++.|.|.++  +|+|.|+|.|.|  
T Consensus        10 ~~~P~i~~~~~~-~~v~~G~~v~l~C~~~~----~i~W~~~-~~~~---~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--   78 (290)
T 2o26_X           10 PSPPSIHPAQSE-LIVEAGDTLSLTCIDPD----FVRWTFK-TYFN---EMVENKKNEWIQEKAEATRTGTYTCSNSN--   78 (290)
T ss_dssp             --CCEESSCSSE-EEEETTSCEEEEEECTT----EEEEEEE-CSSS---CEEEECSSEEEETTCCGGGCEEEEEEESS--
T ss_pred             CCCCEEeCCCCe-EEEcCCCcEEEEECCCC----cEEEecC-Ccce---eeecCCCceEEEeccCHHhCeEEEEEeeC--
Confidence            567888877777 99999999999999999    8999999 5544   112234589999999  699999999999  


Q ss_pred             cceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEE-EeCCCCC-CeEEeecceeceEEE
Q psy8771         180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQY-KPKAANT-PYSEISGIITTYYTV  257 (904)
Q Consensus       180 g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~-~~~~~~~-~~~~~~~~~~~~~~i  257 (904)
                      |. ...+.|.|...  +...  ..+.++.+.  ....+.|.+...+ +. .-.+.| ...+... .-..........+.|
T Consensus        79 g~-~~~~~l~V~~~--~~~~--~~~~~~~~~--~g~~v~l~C~~~~-p~-~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i  149 (290)
T 2o26_X           79 GL-TSSIYVFVRDP--AKLF--LVGLPLFGK--EDSDALVRCPLTD-PQ-VSQYSLIECDGKSLPTDLTFVPNPKAGITI  149 (290)
T ss_dssp             SC-EEEEEEEEECS--SCCB--CCCCCEEEE--TTSCEEECCCBSC-CS-CEEEEEEETTSCCCCTTCEEEEETTTEEEE
T ss_pred             Cc-cEEEEEEEeCC--Cccc--ccccceEEe--cCCeEEEeCcCCC-CC-CceEEEEeCCCcCCCCCCceeeCCCCCEEE
Confidence            54 67777887721  1111  223344443  3445777776553 22 123445 3222111 001111112257999


Q ss_pred             cCCCCCCeE-EEEEEEEcCCCCCCCCCCeEEecC--CCCCC---CCCCceEecccCCCeeEEEecCCCCCCce-eeEEEE
Q psy8771         258 RNLSPYTEY-EFYIIAVNNLGRGPPSSPAVITTG--ETEPG---TAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITAKHH  330 (904)
Q Consensus       258 ~~L~p~~~Y-~~~v~a~n~~g~s~~s~~~~~~t~--~~~p~---~~p~~l~~~~~~~~~v~l~W~~p~~~~~~-~~~~~~  330 (904)
                      .++...+.+ .|+|.|.|..|... +....+...  ...++   ..|...  .......+.|.+.....+... +.++..
T Consensus       150 ~~v~~~d~G~~Y~C~a~n~~~~~~-s~~~~l~V~~~~~~~P~i~~~~~~~--~v~~G~~v~l~C~~~g~p~p~~i~W~~~  226 (290)
T 2o26_X          150 KNVKRAYHRLCVRCAAQRDGTWLH-SDKFTLKVREAIKAIPVVSVPETSH--LLKKGDTFTVVCTIKDVSTSVNSMWLKM  226 (290)
T ss_dssp             ESCCGGGTTCEEEEEEEETTEEEE-CCCEEEEEECCCCSCCEEECSCSBC--CCCTTCCEEEEEEEEESSTTCEEEEEEE
T ss_pred             ecccHHHCCCEEEEEEEECCceEE-eEEEEEEEEeCCCCCCccccCCCcc--eEecCCcEEEEEEEecCCcceeEEEecC
Confidence            999999999 99999999855422 322332221  11111   111111  112234455555443222222 333321


Q ss_pred             E-------------------eeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         331 R-------------------RIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       331 ~-------------------~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                      .                   .......+.|..+.....-.+.+.|.|..|.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~  277 (290)
T 2o26_X          227 NPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGS  277 (290)
T ss_dssp             SSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCE
T ss_pred             CCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCc
Confidence            1                   1122346788888888888888999988774

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4

Probab=99.27  E-value=5.1e-11  Score=113.16  Aligned_cols=162  Identities=19%  Similarity=0.247  Sum_probs=104.8

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--c----ceEEEEeee--cCCeEEEEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--G----RNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~----~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      +|.|...|.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+....+...  .    .+.|.|.++  +|+|.|+|.+
T Consensus         2 ~~~~~~~p~~-~~v~~G~~v~l~C~~~~~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~   79 (182)
T 1rhf_A            2 GLKLMGAPVK-LTVSQGQPVKLNCSVEGMEEPDIQWVKD-GAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQV   79 (182)
T ss_dssp             -----CCCEE-EEEETTCCEEEEEEEESCSSCCEEEEET-TEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred             CCEEEeCCcc-eEEeCCCcEEEEEEEeCCCCCeEEEEEC-CeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEE
Confidence            4677778877 9999999999999999999999999999 766666544433  2    368999999  6999999999


Q ss_pred             EecCcc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceece
Q psy8771         176 ASVLGV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTY  254 (904)
Q Consensus       176 ~n~~g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~  254 (904)
                      .|..|. .+..+.|.|..  .|...  ..|....+..  ...+.|.+...+.+.. ..+.|...+.....   .......
T Consensus        80 ~~~~~~~~~~~~~l~V~~--~p~~~--~~~~~~~~~~--g~~~~l~C~~~g~p~p-~~v~W~~~~~~~~~---~~~~~~~  149 (182)
T 1rhf_A           80 EDGGETEISQPVWLTVEG--VPFFT--VEPKDLAVPP--NAPFQLSCEAVGPPEP-VTIVWWRGTTKIGG---PAPSPSV  149 (182)
T ss_dssp             SSCTTCEECCCEEEEEEC--SCEEE--ECCCCEEECT--TCCEEEEEEEECSSSC-CEEEEEETTEECSC---SEESSEE
T ss_pred             EcCCCcEEEEEEEEEEec--CCeEE--ecCcceEecC--CCEEEEEeEecCCCCC-CEEEEEcCCeECCC---CCCCceE
Confidence            998775 44677788871  11111  1233333332  3455555554432222 13444443211110   0013467


Q ss_pred             EEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         255 YTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       255 ~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      +.|.+++  +.+.|+|.|.|..|..
T Consensus       150 L~i~~~~--d~G~Y~C~a~N~~g~~  172 (182)
T 1rhf_A          150 LNVTGVT--QSTMFSCEAHNLKGLA  172 (182)
T ss_dssp             EEECCCS--SCEEEEEEEEETTEEE
T ss_pred             EEEeccc--cCeEEEEEEECCCCCc
Confidence            8898884  6799999999998864

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.27  E-value=4.1e-11  Score=104.75  Aligned_cols=110  Identities=22%  Similarity=0.412  Sum_probs=85.8

Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCe--EEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE---eecCc
Q psy8771         464 GEGATTPPIPVRTKQYEPGTAPRDV--QVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ---VVDNN  538 (904)
Q Consensus       464 g~~~~s~~~~~~t~~~~p~~~p~~l--~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~  538 (904)
                      |.+..+..+.+.    .+|.+|.++  .+...+.+++.|+|.+|.+.++.+.+|.|+|+..+    ..|...   .....
T Consensus         4 G~~~~s~~l~v~----~~P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~----~~~~~~~~~~~~~~   75 (121)
T 1wf5_A            4 GSSGRSAHLRVR----QLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN----APWTVLLASVDPKA   75 (121)
T ss_dssp             CCCCCCCCSSCC----CCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT----CCCEEEESSCCTTC
T ss_pred             CcccceEEEEEe----eCCccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC----CCceEeEcccCCCc
Confidence            444444444444    345788999  88888999999999998766678999999999875    456544   22567


Q ss_pred             eEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcE-EEecCCCCCC
Q psy8771         539 QLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQGVPS  581 (904)
Q Consensus       539 ~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~-~~~t~~~~p~  581 (904)
                      +.+.+.+|.|++.|.|+|+|.|..|.|.+|... .+.|....|.
T Consensus        76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~~P~  119 (121)
T 1wf5_A           76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPESGPS  119 (121)
T ss_dssp             CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCCSSC
T ss_pred             cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCCCCC
Confidence            789999999999999999999999999888876 5777666554

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.27  E-value=2.7e-11  Score=103.83  Aligned_cols=92  Identities=28%  Similarity=0.314  Sum_probs=75.6

Q ss_pred             cEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccC--CCCccEEEEec--CcceEEecCCCCCceEEEEEEEeeCC
Q psy8771         723 VSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGR--SDSEASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSI  798 (904)
Q Consensus       723 l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~--~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~  798 (904)
                      +.+...++++|.|+|+.+   ..+|.+.+|.|+|+..+.  .........+.  ..+++.|.+|+|++.|.|+|+|+|..
T Consensus        22 ~~~~a~sstsi~vsW~~~---~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~   98 (120)
T 1ujt_A           22 HNPVVLTPTTVQVTWTVD---RQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNE   98 (120)
T ss_dssp             CCCCCCBTTEEEEEEEES---SCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSS
T ss_pred             eccEEccCceEEEEEccC---CCCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCC
Confidence            344566889999999964   468999999999999765  11222333333  67899999999999999999999999


Q ss_pred             CCCCCCCcEEeecCCCC-CC
Q psy8771         799 GDGPSSYPITIRTHEDD-PS  817 (904)
Q Consensus       799 g~g~~s~~~~~~t~~~~-P~  817 (904)
                      |.|++|.++.++|.+++ |+
T Consensus        99 G~Gp~S~~v~~~T~e~v~Ps  118 (120)
T 1ujt_A           99 FQGMDSESKTVRTTEESGPS  118 (120)
T ss_dssp             CCCCCCCCEEEEECSSCCCC
T ss_pred             ccCCCCCCEEEECCCCCCCC
Confidence            99999999999999998 86

>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.27  E-value=1.8e-11  Score=102.13  Aligned_cols=84  Identities=19%  Similarity=0.245  Sum_probs=72.5

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..||.|...+.+ +.+.+|+.+.|.|.+  .|.|.|.|+|+ |..+..+.++.+.    ...|.|.++  +|+|.|+|.|
T Consensus         5 ~~p~~~~~~~~~-~~v~~G~~v~l~C~v--~p~p~v~W~k~-g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a   80 (100)
T 2yuz_A            5 SSGLKILTPLTD-QTVNLGKEICLKCEI--SENIPGKWTKN-GLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAP   80 (100)
T ss_dssp             SCCCCCSBCCCC-EEEETTSCCCEEEEC--SSCCCEEEEET-TEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEE
T ss_pred             CCCCEEeccCCc-eEEcCCCCEEEEEEe--CCCCeEEEEEC-CEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEE
Confidence            457889999988 999999999999999  89999999999 8788777776652    247999999  7999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                      .|.  ..+.++.|.|.
T Consensus        81 ~N~--~~~~~a~L~V~   94 (100)
T 2yuz_A           81 DAY--NVTLPAKVHVI   94 (100)
T ss_dssp             SSS--CCCEEEEEEEE
T ss_pred             cCC--CeeEEEEEEEe
Confidence            997  56778889988

>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*

Probab=99.27  E-value=6.8e-11  Score=115.48  Aligned_cols=174  Identities=10%  Similarity=0.056  Sum_probs=110.1

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc-e--eecce--EEEEeee--cCCeEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-L--PVGRN--VLTLDRV--TESENYTCI  174 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~-~--~~~~~--~l~i~~l--~d~g~Y~c~  174 (904)
                      ..+|.|...|.  ..+.+|++++|.|.+.| +.+.+.|+|+ +..+....+ .  ..+.+  .|.|.++  +|+|.|+|.
T Consensus         7 ~~~P~i~~~p~--~~v~~G~~vtL~C~~~~-~~~~~~W~k~-g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   82 (218)
T 1uct_A            7 FPMPFISAKSS--PVIPLDGSVKIQCQAIR-EAYLTQLMII-KNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQ   82 (218)
T ss_dssp             SCCCCEEESSC--SEEETTCCEEEEECCCT-TCSEEEEEEE-ETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEE
T ss_pred             CCCCEEEecCC--CccCCCCCEEEEEEcCC-CCCEEEEEEC-CCcccccccccCCCCcceeeEEEEcccccccCEEEEEE
Confidence            56788888876  57899999999999988 6889999999 555432211 1  12345  8999998  699999999


Q ss_pred             EEecCcceE--EEEEEEEEeecCCCCCCCCCCc-----ceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEe
Q psy8771         175 AASVLGVIE--TSTIVKVQCKYAPLLTLPVAPL-----DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEI  247 (904)
Q Consensus       175 a~n~~g~~~--~~~~l~v~~~~~~~~~~P~~p~-----~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~  247 (904)
                      |.|..|...  ....|.|.       ..+.+|.     +..+  .....++|.+.....+...  +.|...+........
T Consensus        83 a~n~~~~~~~s~~~~l~V~-------~~~~~P~i~~~p~~~v--~~G~~v~L~C~~~~~~~~~--~~W~k~g~~~~~~~~  151 (218)
T 1uct_A           83 YRIGHYRFRYSDTLELVVT-------GLYGKPFLSADRGLVL--MPGENISLTCSSAHIPFDR--FSLAKEGELSLPQHQ  151 (218)
T ss_dssp             EEETTTEEEECCCEEEEEE-------CSSCCCEEEESSCSEE--CTTCCCEEEEECSSSCCSE--EEEEETTCSSCCSEE
T ss_pred             EEcCCCceeecCCEEEEEc-------CcccCCEEEeCCCCcc--CCCCCEEEEEeCCCCCCCE--EEEEECCCccccccc
Confidence            999876433  34566665       2222221     1222  2345677777434333333  344444322211111


Q ss_pred             ecceeceEEEcCCCCCCeEEEEEEEEcCCC---CCCCCCCeEEecC
Q psy8771         248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLG---RGPPSSPAVITTG  290 (904)
Q Consensus       248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g---~s~~s~~~~~~t~  290 (904)
                      .......|.|.+++..+.+.|+|.|.|...   .+..|..+.+...
T Consensus       152 ~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~  197 (218)
T 1uct_A          152 SGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVT  197 (218)
T ss_dssp             ECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC
T ss_pred             CCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEe
Confidence            223457899999999999999999998642   2345555555443

>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A

Probab=99.27  E-value=2.4e-11  Score=111.25  Aligned_cols=92  Identities=25%  Similarity=0.418  Sum_probs=80.8

Q ss_pred             CCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec-----ceEEEEeee--cCCeE
Q psy8771          98 DPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG-----RNVLTLDRV--TESEN  170 (904)
Q Consensus        98 ~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-----~~~l~i~~l--~d~g~  170 (904)
                      .+.+..+|.|...+.+ +.+..|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+.     ...|.|.++  +|+|.
T Consensus        35 ~~~v~~~P~~~~~~~~-~~v~~G~~v~L~C~~~g~P~p~v~W~k~-g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~  112 (154)
T 1fhg_A           35 EEKPHVKPYFTKTILD-MEVVEGSAARFDCKVEGYPDPEVMWFKD-DNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAK  112 (154)
T ss_dssp             CCCCCEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCSSSEEEEECTTCEEEEEESSCCGGGCEE
T ss_pred             cccCCCCCeEEccCCc-EEEeCCCeEEEEEEEEEecCCEEEEEEC-CEECCCCCcEEEEECCCCeEEEEECCCChhcCEE
Confidence            3446788999999988 9999999999999999999999999999 7777766666542     358999999  69999


Q ss_pred             EEEEEEecCcceEEEEEEEEE
Q psy8771         171 YTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       171 Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |+|.|.|..|.....+.|.|.
T Consensus       113 Y~C~a~N~~G~~~~~~~l~V~  133 (154)
T 1fhg_A          113 YTCKAVNSLGEATCTAELLVE  133 (154)
T ss_dssp             EEEEEEETTEEEEEEEEEEEE
T ss_pred             EEEEEEECCCeEEEEEEEEEe
Confidence            999999999999999999998

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.27  E-value=6.9e-12  Score=106.08  Aligned_cols=97  Identities=32%  Similarity=0.545  Sum_probs=80.9

Q ss_pred             ecCCCCCCCCCCeEEEecCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEE
Q psy8771         476 TKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT  553 (904)
Q Consensus       476 t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~  553 (904)
                      +.+..|+.+|.++.+...+.+++.|+|++|  ...++.+.+|.|+|+..+..   .|.. .....+.+.+.+|.|++.|.
T Consensus         3 t~e~~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~---~~~~-~~~~~~~~~i~~L~p~t~Y~   78 (103)
T 2edy_A            3 SGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQ---QELQ-NITTDTRFTLTGLKPDTTYD   78 (103)
T ss_dssp             TTCCCCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSC---CEEE-EEESSSCCEECSCCTTCCEE
T ss_pred             CCCCCCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCC---ccEE-EcCCcceEEEcCCCCCCEEE
Confidence            344577789999999999999999999998  55678999999999987642   2333 34567789999999999999


Q ss_pred             EEEEEEeCCCCCCCCCcEEEecC
Q psy8771         554 IRVQAFTSVGPGPLSAPVLVKTQ  576 (904)
Q Consensus       554 ~~V~a~~~~g~~~~S~~~~~~t~  576 (904)
                      |+|+|.|..|.|.+|..+.++|.
T Consensus        79 ~~V~A~n~~G~g~~S~~~~~~T~  101 (103)
T 2edy_A           79 IKVRAWTSKGSGPLSPSIQSRTM  101 (103)
T ss_dssp             EECCEECSSCBCCCCCCCCCCCC
T ss_pred             EEEEEECCCCCCCCCCCEEEEec
Confidence            99999999999999988877764

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.26  E-value=5.9e-11  Score=100.38  Aligned_cols=95  Identities=26%  Similarity=0.389  Sum_probs=71.8

Q ss_pred             cCCCCCCCCCCceEEecCCCeEEEEE--eCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCcee
Q psy8771         575 TQQGVPSQPRDLRAVDIQETAVTLAW--SKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENII  652 (904)
Q Consensus       575 t~~~~p~~p~~~~~~~~~~~~~~l~W--~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~  652 (904)
                      |...+|.+|.+|++..++.+++.|+|  .+|..                                         .++. .
T Consensus         5 T~~~~P~~p~~l~~~~~~~~sv~l~W~~~~P~~-----------------------------------------~ng~-~   42 (107)
T 1x5a_A            5 SSGAESLSGLSLKLVKKEPRQLELTWAGSRPRN-----------------------------------------PGGN-L   42 (107)
T ss_dssp             TTTCCCCCSCCCCEEEEETTEEEEECCCCCSSC-----------------------------------------CSSC-C
T ss_pred             CCCCCCCCCCceEEEecCCCEEEEEECCCCCCC-----------------------------------------CCCc-e
Confidence            55567777778888887888888888  66654                                         4556 8


Q ss_pred             eEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCC
Q psy8771         653 SYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY  714 (904)
Q Consensus       653 ~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~  714 (904)
                      +|.|+|+.... .......  ...++|.+|+|++.|.|+|+|+|..|.|.+|..+.++|...
T Consensus        43 ~Y~v~y~~~~~-~~~~~~~--~~~~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~  101 (107)
T 1x5a_A           43 SYELHVLNQDE-EWHQMVL--EPRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP  101 (107)
T ss_dssp             EEEEEEECSSC-EEEEEES--SSEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred             EEEEEEEeCCC-CceEEEe--cceEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCC
Confidence            88888876511 1111111  22399999999999999999999999999999999999865

>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}

Probab=99.26  E-value=1.2e-10  Score=111.39  Aligned_cols=148  Identities=21%  Similarity=0.283  Sum_probs=105.8

Q ss_pred             CCCCcEEEeccCCc--eEEEEeCCCCC---------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCC
Q psy8771          36 APRDVQVRPLSSST--MVIQWDEPETP---------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVP  104 (904)
Q Consensus        36 ~p~~l~~~~~~~~s--~~v~W~~~~~~---------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~  104 (904)
                      ....|.|...+.+.  +.|.|.+....         ++.+........+.....|...+. ......+.+.+     ..+
T Consensus        19 ~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V-----~~~   92 (190)
T 2wv3_A           19 LPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEV-----KAA   92 (190)
T ss_dssp             SCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEE-----ECC
T ss_pred             ceEEEEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEE-----ecC
Confidence            66677777766666  89999875211         122444444555555555665555 33333444554     457


Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEee--CCccccC---CCCceeec----ceEEEEeee---cCCeEEE
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK--GQNIELT---PDDKLPVG----RNVLTLDRV---TESENYT  172 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k--~~~~~~~---~~~~~~~~----~~~l~i~~l---~d~g~Y~  172 (904)
                      |.|...+.. ..+.+|+.+.|.|.+.|.|.|.|.|++  + +..+.   ...++.+.    .+.|.|.++   +|+|.|+
T Consensus        93 p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~-g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~  170 (190)
T 2wv3_A           93 PDITGHKRS-ENKNEGQDAMMYCKSVGYPHPEWMWRKKEN-GVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYE  170 (190)
T ss_dssp             CEEEEECSE-EEEETTSCEEEEEEEECSSCCEEEEEEEET-TEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEE
T ss_pred             CcccccCCc-ceeeCCCcEEEEEEeCccCCCceEEEEcCC-CceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEE
Confidence            888887777 889999999999999999999999999  5 54442   34455442    247999987   4899999


Q ss_pred             EEEEecCcceEEEEEEEEE
Q psy8771         173 CIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|.|..|.....+.|.|.
T Consensus       171 C~a~N~~g~~~~~~~l~V~  189 (190)
T 2wv3_A          171 CNATNSIGSASVSTVLRVR  189 (190)
T ss_dssp             EEEECSSCEEEEEEEEEEE
T ss_pred             EEEEecCCcceeEEEEEEE
Confidence            9999999999999888876

>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A

Probab=99.26  E-value=3.4e-11  Score=102.59  Aligned_cols=87  Identities=21%  Similarity=0.321  Sum_probs=70.2

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCC---CeEEEeeCCccccC--CCCceee----------cceEEEEeee--c
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPM---PFVKWRKGQNIELT--PDDKLPV----------GRNVLTLDRV--T  166 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~---p~i~W~k~~~~~~~--~~~~~~~----------~~~~l~i~~l--~  166 (904)
                      .|.|+..|.+ +.+.+|++++|.|.+.|.|.   |.|.|+|++...+.  ...++.+          ...+|.|.++  +
T Consensus         4 ~p~f~~~p~~-~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~   82 (108)
T 3cx2_A            4 IGLFVMRPQD-GEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA   82 (108)
T ss_dssp             CCSCSBCCCC-EEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred             ccEEEeCCCc-EEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence            5778888888 99999999999999999998   99999998422211  1234432          2468999999  6


Q ss_pred             CCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         167 ESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       167 d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |+|.|+|.|.|..|..++.+.|.|.
T Consensus        83 D~G~Y~C~a~N~~G~~~~~~~L~V~  107 (108)
T 3cx2_A           83 FTGSYRCEVSTKDKFDCSNFNLTVH  107 (108)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred             cCEEEEEEEecCCCceEEEEEEEEe
Confidence            9999999999999999999999886

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.26  E-value=1.4e-11  Score=105.10  Aligned_cols=90  Identities=19%  Similarity=0.230  Sum_probs=76.4

Q ss_pred             ceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCC
Q psy8771         626 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTP  705 (904)
Q Consensus       626 ~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~  705 (904)
                      ++.+..++.++++|+|.++...++.+.+|.|+|+..+...+.....+....++|.+|.|++.|.|+|+|+|..|.|.+|.
T Consensus        16 ~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~   95 (110)
T 2db8_A           16 QLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSK   95 (110)
T ss_dssp             CCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEEEESCSCEEEECCCSSSCCEEEEEEECSSCBCCCCS
T ss_pred             cceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEEeCCcCEEEECCCCCCCEEEEEEEEEeCCcCCCCCC
Confidence            44455678999999999998877899999999988765555555555678999999999999999999999999999999


Q ss_pred             CeeEEecCCC
Q psy8771         706 PIPVRTKQYV  715 (904)
Q Consensus       706 ~~~~~t~~~~  715 (904)
                      .+.++|...+
T Consensus        96 ~~~~~T~~~p  105 (110)
T 2db8_A           96 TLVLQTSEGS  105 (110)
T ss_dssp             CEECCCCCCC
T ss_pred             CEEEEcCCCC
Confidence            9988887653

>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=99.26  E-value=4.4e-12  Score=134.16  Aligned_cols=245  Identities=16%  Similarity=0.124  Sum_probs=78.4

Q ss_pred             CCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         111 PPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      +.+ +.+.+|+.+.|.|.+.|. |.+.|.|+|+ +..+....++...++.|.|.++  +|+|.|+|.|.|. |.......
T Consensus        15 ~~~-~~v~~G~~v~l~C~~~~~~p~~~v~W~k~-g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~   91 (334)
T 1ry7_B           15 QEQ-LVFGSGDAVELSCPPPGGGPMGPTVWVKD-GTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFS   91 (334)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCc-EEEecCCcEEEEeeCCCCCCCcceEEEEC-CeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEE
Confidence            556 899999999999999987 6789999999 7777777777778889999998  6999999999998 77777777


Q ss_pred             EEEEeec--------------------CCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCC----C
Q psy8771         188 VKVQCKY--------------------APLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT----P  243 (904)
Q Consensus       188 l~v~~~~--------------------~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~----~  243 (904)
                      |.|....                    +|.+..|.....-.........+.|.+...+.+..  .+.|...+...    .
T Consensus        92 l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~--~v~W~~~~~~~~~~~~  169 (334)
T 1ry7_B           92 VRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTP--SISWLKNGREFRGEHR  169 (334)
T ss_dssp             ---------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCC--EEECCBTTBCCCTTSS
T ss_pred             EEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCC--eEEEEECCEECccccc
Confidence            7776221                    11111111111111222334567777776533332  34554432111    0


Q ss_pred             e-EEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCC----CCCCceEecccCCCeeEEEecCC
Q psy8771         244 Y-SEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPG----TAPRDVQVRPLSSSTMVIQWDEP  318 (904)
Q Consensus       244 ~-~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~----~~p~~l~~~~~~~~~v~l~W~~p  318 (904)
                      . ..........+.|.++...+.+.|+|.|.|..|.......+.+......++    ..|....+..  ...+.|.+...
T Consensus       170 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~--G~~v~l~C~~~  247 (334)
T 1ry7_B          170 IGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVL--GSDVEFHCKVY  247 (334)
T ss_dssp             TTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEES--SCCEEECCCCB
T ss_pred             ccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeC--CCCEEEEEEEe
Confidence            0 001112346799999999999999999999887643222233322111110    1122222221  23344554443


Q ss_pred             CCCCceeeEEEEE------------------e-------eceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         319 ETPNGQITAKHHR------------------R-------IGLVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       319 ~~~~~~~~~~~~~------------------~-------~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                      ..+...+.++...                  .       ......+.|..+.......+++.|.|..|.
T Consensus       248 g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~  316 (334)
T 1ry7_B          248 SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGF  316 (334)
T ss_dssp             CSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCC
T ss_pred             cCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCe
Confidence            3333333333210                  0       000125788888887777888888888775

>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A

Probab=99.26  E-value=6.8e-12  Score=106.36  Aligned_cols=89  Identities=19%  Similarity=0.404  Sum_probs=78.2

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ...+|.|...|.+ +.+.+|+++.|.|.+.|.|.|.|.|+|+ +..+....++.+.    .+.|.|.++  +|+|.|+|.
T Consensus        11 ~~~~~~i~~~p~~-~~v~~G~~v~L~C~~~g~p~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   88 (106)
T 1nct_A           11 TTLAARILTKPRS-MTVYEGESARFSCDTDGEPVPTVTWLRK-GQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVV   88 (106)
T ss_dssp             SSCCCEEEECCCC-EEESSSSCEECCEEEECSSCCBCCBCSS-SSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEEC
T ss_pred             CCCCCEEEECCCC-EEEeCCCcEEEEEEEEEcCCCEEEEEEC-CEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEE
Confidence            3678899999998 9999999999999999999999999999 7777666676642    578999999  699999999


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.|..|..+..+.|.|.
T Consensus        89 a~N~~G~~~~~~~l~V~  105 (106)
T 1nct_A           89 VENSEGKQEAEFTLTIQ  105 (106)
T ss_dssp             CBCSSCBCCEEEEEEEC
T ss_pred             EEeCCCeEEEEEEEEEE
Confidence            99999998888888875

>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R

Probab=99.26  E-value=3.9e-11  Score=125.63  Aligned_cols=235  Identities=13%  Similarity=0.136  Sum_probs=133.5

Q ss_pred             CCCCcEEEeccCC-ceEEEEeCCCCC--------------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCC
Q psy8771          36 APRDVQVRPLSSS-TMVIQWDEPETP--------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPV  100 (904)
Q Consensus        36 ~p~~l~~~~~~~~-s~~v~W~~~~~~--------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~  100 (904)
                      ....|.|...+.+ ...|.|.+....              ++.+........|.....|...+..........+.+    
T Consensus        21 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v----   96 (315)
T 1itb_B           21 EIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF----   96 (315)
T ss_dssp             SCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCEE----
T ss_pred             CcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEEE----
Confidence            5556666655555 678999876421              233444444444555555554433221222222222    


Q ss_pred             CCCCCeEEcCCC--CceEEecCCCeEEEEEE------ccCCCCeEEEeeCCccccC-CCCceeecceEEEEeee--cCCe
Q psy8771         101 RRVPPQFSIPPP--ALLEVMLDSPLNLSCVA------VGSPMPFVKWRKGQNIELT-PDDKLPVGRNVLTLDRV--TESE  169 (904)
Q Consensus       101 ~~~~P~~~~~~~--~~~~~~~g~~~~l~C~~------~g~p~p~i~W~k~~~~~~~-~~~~~~~~~~~l~i~~l--~d~g  169 (904)
                      ...+|.+...+.  ....+..|+.+.|.|.+      .|.|.+.|+|+|+ +..+. ...++...++.|.|.++  +|+|
T Consensus        97 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~-~~~l~~~~~~~~~~~~~L~i~~v~~~d~G  175 (315)
T 1itb_B           97 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKD-CKPLLLDNIHFSGVKDRLIVMNVAEKHRG  175 (315)
T ss_dssp             ECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEET-TEECCCCSSSEEEETTEEEESSCCGGGCE
T ss_pred             eCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEEC-CEECCCccceEeecCceEEEEeceehhCc
Confidence            234444433322  11678899999999998      8999999999999 55553 44566667889999999  6999


Q ss_pred             EEEEEEE-ecCcceE---EEEEEEEEee---cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC--
Q psy8771         170 NYTCIAA-SVLGVIE---TSTIVKVQCK---YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA--  240 (904)
Q Consensus       170 ~Y~c~a~-n~~g~~~---~~~~l~v~~~---~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~--  240 (904)
                      .|+|.|. |..|...   ....+.+...   ..|.+..  ++.. .+.......++|.+...+.+...  +.|...+.  
T Consensus       176 ~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~--~~~~-~~~~~~g~~v~l~C~~~g~P~p~--i~W~~~g~~i  250 (315)
T 1itb_B          176 NYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS--PANE-TMEVDLGSQIQLICNVTGQLSDI--AYWKWNGSVI  250 (315)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECS--CCSE-EEECCSSSCEEEEEEEEECTTSE--EEEEETTEEC
T ss_pred             EEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEec--CCCC-cEEEeCCCcEEEEEEEecCCCCe--eEEEECCEEC
Confidence            9999999 7888763   3333333310   1111111  1111 11222234455555443222222  33433221  


Q ss_pred             --CCC-----eEEeec-------ceeceEEEcCCCCCC-eEEEEEEEEcCCCCCC
Q psy8771         241 --NTP-----YSEISG-------IITTYYTVRNLSPYT-EYEFYIIAVNNLGRGP  280 (904)
Q Consensus       241 --~~~-----~~~~~~-------~~~~~~~i~~L~p~~-~Y~~~v~a~n~~g~s~  280 (904)
                        ...     ......       .....|.|.++...+ .+.|+|.|.|..|...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~  305 (315)
T 1itb_B          251 DEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDA  305 (315)
T ss_dssp             CTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEE
T ss_pred             CcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCcee
Confidence              110     000110       123479999999999 9999999999999754

>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X

Probab=99.26  E-value=2.5e-11  Score=102.15  Aligned_cols=85  Identities=19%  Similarity=0.269  Sum_probs=67.6

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee--e-------cceEEEEeee--cCCeE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP--V-------GRNVLTLDRV--TESEN  170 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~--~-------~~~~l~i~~l--~d~g~  170 (904)
                      ..||+|.....    ...|+.+.|.|.+.|.|.|.|+|+|+ +..+..+.++.  .       ..+.|.|.++  +|+|.
T Consensus         2 ~~pP~i~~~~~----~~~~~~~~~~c~v~G~P~P~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~   76 (103)
T 1wwb_X            2 HFAPTITFLES----PTSDHHWCIPFTVKGNPKPALQWFYN-GAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGD   76 (103)
T ss_dssp             CCCCCCCCCCC----CCCCCEEEEEEEEECSSCCEEEEEET-TEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred             CCCCEEEeccC----ceECcEEEEEEEEEEeCCCEEEEEEC-CEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEE
Confidence            46777653322    24678899999999999999999999 77776665431  1       2345999999  69999


Q ss_pred             EEEEEEecCcceEEEEEEEEE
Q psy8771         171 YTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       171 Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |+|.|.|..|..+.++.|.|.
T Consensus        77 Y~C~A~N~~G~~~~~~~l~V~   97 (103)
T 1wwb_X           77 YTLIAKNEYGKDEKQISAHFM   97 (103)
T ss_dssp             EEEEEECSSCEEEEEEEECCS
T ss_pred             EEEEEEeCCCcEeEEEEEEEC
Confidence            999999999999999998887

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G

Probab=99.25  E-value=5.1e-11  Score=116.15  Aligned_cols=167  Identities=17%  Similarity=0.218  Sum_probs=112.2

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccc------------cCCCCceeecceEEEEeee--cCC
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIE------------LTPDDKLPVGRNVLTLDRV--TES  168 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~------------~~~~~~~~~~~~~l~i~~l--~d~  168 (904)
                      .++.|...+.. +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..            .....|+......|.|.++  +|+
T Consensus         3 ~~~~i~~~~~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~   80 (209)
T 1nbq_A            3 GSVTVHSSEPE-VRIPENNPVKLSCAYSGFSSPRVEWKFD-QGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDT   80 (209)
T ss_dssp             CCCEEECSCSB-CCEETTCCCEEECEEESCSSEEEEEEEE-ETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSC
T ss_pred             ceEEEEcCCCc-eEEEcCCCEEEEEEEeCCCCcEEEEEEc-CCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHC
Confidence            35567777777 9999999999999999999999999998 433            2234566666689999999  699


Q ss_pred             eEEEEEEEecCcc--eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeC-CCccceEEEEEEEeCCCCCCeE
Q psy8771         169 ENYTCIAASVLGV--IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY-PSETLLYYVIQYKPKAANTPYS  245 (904)
Q Consensus       169 g~Y~c~a~n~~g~--~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~-~~~~~~~y~v~~~~~~~~~~~~  245 (904)
                      |.|+|.+.|..|.  .+....|.|.  ..|  ..+..+....+  .....++|.+.. .+.+..  .+.|...+......
T Consensus        81 G~Y~C~~~~~~g~~~~~~~~~l~V~--~~p--~~~~~~~~~~~--~~g~~~~l~C~~~~~~p~~--~v~W~~~~~~~~~~  152 (209)
T 1nbq_A           81 GTYTCMVSEEGGNSYGEVKVKLIVL--VPP--SKPTVNIPSSA--TIGNRAVLTCSEQDGSPPS--EYTWFKDGIVMPTN  152 (209)
T ss_dssp             SEEEEEEEETTSSCEECCEEECCEE--BCC--CCCCCCCBSEE--ETTSCEEECCCCCSCBSCC--EEEEEETTCCCCSC
T ss_pred             cEEEEEEecCCCCccceEEEEEEEe--cCC--cCCCcccccce--ecCCEEEEEEeCCCCCCCc--eeEEEECCeeCCCc
Confidence            9999999998764  3445566665  221  11112222222  334567777775 333333  45554443221100


Q ss_pred             -----------EeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         246 -----------EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       246 -----------~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                                 .........+.|.++...+.+.|+|.|.|..|..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~  197 (209)
T 1nbq_A          153 PKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP  197 (209)
T ss_dssp             SSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred             cccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence                       0011134679999999999999999999999876

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}

Probab=99.25  E-value=9.9e-11  Score=114.84  Aligned_cols=171  Identities=15%  Similarity=0.195  Sum_probs=112.6

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      ...++|...|.+ +.+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+...     ....|.|.++  +|+|.|+|.+.|..
T Consensus        16 ~~~~~i~~~p~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~~~n~~   88 (218)
T 3k0w_A           16 PRGSKITVNPES-KAVLAGQFVKLCCRATGHPFVQYQWFKM-NKEIPNG-----NTSELIFNAVHVKDAGFYVCRVNNNF   88 (218)
T ss_dssp             ---CCEEECCCC-EEEETTSBEEEECEETTTTSSEEEEEET-TEECTTC-----CSSEEEETTCCGGGCEEEEEEEECTT
T ss_pred             CCCCEEEECCCC-eEEeCCCcEEEEeeecCCCCCEEEEEEC-CEECCCC-----CCCEEEEccCChhhCeEeEEEEEcCC
Confidence            566788888988 9999999999999999999999999999 6555432     4568999998  69999999999988


Q ss_pred             cce-EEEEEEEEEeecCCC-CC----C---C---CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEe
Q psy8771         180 GVI-ETSTIVKVQCKYAPL-LT----L---P---VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEI  247 (904)
Q Consensus       180 g~~-~~~~~l~v~~~~~~~-~~----~---P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~  247 (904)
                      |.. +..+.|.|....... ..    .   |   ..|....+.  ....++|.+...+.+...  +.|...+.     .+
T Consensus        89 ~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~--~G~~v~L~C~~~g~p~~~--v~W~~~~~-----~~  159 (218)
T 3k0w_A           89 TFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLM--PGSTLVLQCVAVGSPIPH--YQWFKNEL-----PL  159 (218)
T ss_dssp             CCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEEC--TTCCEEEECEEEBSSCCE--EEEEETTE-----EC
T ss_pred             CCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeec--CCCcEEEEEEecccCCCe--EEEEECCE-----EC
Confidence            764 455777776211000 00    0   0   012222222  234566666553322222  44544321     12


Q ss_pred             ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEec
Q psy8771         248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT  289 (904)
Q Consensus       248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t  289 (904)
                      .......+.|.++...+.+.|+|.|.|..|... +..+.+..
T Consensus       160 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~-s~~~~l~V  200 (218)
T 3k0w_A          160 THETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD-SKKVEIII  200 (218)
T ss_dssp             TTCCSSEEEESSCCGGGCEEEEEEEECSSCEEE-CCCEEEEE
T ss_pred             CCCCCCEEEEeecChhcCEEEEEEEEcCCCCce-eeeEEEEE
Confidence            223346799999999999999999999887533 34444433

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.25  E-value=3.9e-11  Score=102.63  Aligned_cols=96  Identities=21%  Similarity=0.309  Sum_probs=78.4

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCC----Cc-eeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEE
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSG----EN-IISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAA  694 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~----~~-~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a  694 (904)
                      .+.+|..+.+.+++.++++|+|.++.+++    .. +.+|.|+........+..+.....+.+++.+|+|++.|.|+|+|
T Consensus        15 pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~~~~t~~~v~gL~p~t~Y~frV~A   94 (120)
T 1wfu_A           15 PLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKV   94 (120)
T ss_dssp             CCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEEEE
T ss_pred             CCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEecCCccEEEECCCCCCCEEEEEEEE
Confidence            45677777888999999999999998654    34 89999994443444455555555678999999999999999999


Q ss_pred             EcCCCCCCCCCCeeEEecCCC
Q psy8771         695 QSPRGEGATTPPIPVRTKQYV  715 (904)
Q Consensus       695 ~~~~G~~~~s~~~~~~t~~~~  715 (904)
                      +|..|.|.+|..+.++|...+
T Consensus        95 ~n~~G~s~~S~~~~~~T~~~p  115 (120)
T 1wfu_A           95 TSPSGEYEYSPVVSVATTRES  115 (120)
T ss_dssp             ECSSSCEEECCCEEEECCCCC
T ss_pred             ECCCCCCCCCccEeeEcCCCC
Confidence            999999999999999998763

>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}

Probab=99.25  E-value=3.6e-11  Score=130.59  Aligned_cols=188  Identities=9%  Similarity=-0.028  Sum_probs=111.4

Q ss_pred             CcceeeeccceEEE-----EecCCCCCcceeeEeeCCCCCCCCcEEEecc-CCceEEEEeCCCCC--C------------
Q psy8771           2 DTRCYVESPEEVFI-----ILCPLPPLIPGYILVTEPGTAPRDVQVRPLS-SSTMVIQWDEPETP--N------------   61 (904)
Q Consensus         2 ~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~p~~~p~~l~~~~~~-~~s~~v~W~~~~~~--~------------   61 (904)
                      .|+|.|.+..+...     +-...+|..+.. ......+....|.|...+ .+.+.|.|.+....  .            
T Consensus       205 ~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~-~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~  283 (423)
T 3qs7_E          205 DIRCCARNELGRECTRLFTIDLNQTPQTTLP-QLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTN  283 (423)
T ss_dssp             CEEEEEECSSCEEEEECEEEESSSCCCSSTT-EEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETT
T ss_pred             EEEEEEEcCCCCcceeeEEEEEecCCccCCC-ceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCC
Confidence            48999998765432     222233333221 111222367788888887 66799999876432  1            


Q ss_pred             ------CceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCC-CceEEecCCCeEEEEEEccCCC
Q psy8771          62 ------GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPP-ALLEVMLDSPLNLSCVAVGSPM  134 (904)
Q Consensus        62 ------g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~  134 (904)
                            +.++.......|...+.|...+.   ....+.+.|     ..+|.+...+. ..+.+.+|+++.|.|.+.|.|.
T Consensus       284 ~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V-----~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~  355 (423)
T 3qs7_E          284 RTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTI-----VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQ  355 (423)
T ss_dssp             TEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEE-----ESSCEEEEC---CEECCCTTCCCCEEEEEEEESC
T ss_pred             ceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEE-----EeCCcceEcCCCccEEecCCCeEEEEEEEEEcCC
Confidence                  11222233444544555554444   444555554     34566655442 2378889999999999999999


Q ss_pred             CeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcc
Q psy8771         135 PFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLD  206 (904)
Q Consensus       135 p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~  206 (904)
                      |.|+|+|+ +..+....+...+...+.+..+  +|+|.|+|.|.|..|..+.+..|.|.       ..|.+|..
T Consensus       356 p~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~-------~~p~~~~~  421 (423)
T 3qs7_E          356 IRCTWTFS-RKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR-------SGTKHHHH  421 (423)
T ss_dssp             CEEEEEET-TEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----------------
T ss_pred             CeEEEEEC-CEECCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEe-------cCCccccc
Confidence            99999999 7666543321112222222333  69999999999999999999999999       67766654

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.25  E-value=1.8e-11  Score=106.32  Aligned_cols=104  Identities=22%  Similarity=0.309  Sum_probs=82.4

Q ss_pred             ecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEE
Q psy8771         711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYR  789 (904)
Q Consensus       711 t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~  789 (904)
                      +...+|. +|.++++...+.+++.|+|+++.  ..++.+.+|.|+|+..+... .+...... ..+.+++.+|.+++.|.
T Consensus        11 ~~~~~P~-~P~~~~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~   86 (117)
T 1uem_A           11 DLSDLPG-PPSKPQVTDVTKNSVTLSWQPGT--PGTLPASAYIIEAFSQSVSN-SWQTVANHVKTTLYTVRGLRPNTIYL   86 (117)
T ss_dssp             CSCCSCB-CCCCCEEEEECSSCEEEECCCCB--CSSSCCCEEEEEEEETTTEE-EEEEEEEEECSSEEEECSCCTTCEEE
T ss_pred             CCCCCcc-CCCCCEEEEecCCEEEEEEeCCC--CCCcCceEEEEEEEECCCCC-ceeEcccccCcCEEEECCCCCCCEEE
Confidence            4444555 68899999999999999999984  56778999999998864211 12222233 78899999999999999


Q ss_pred             EEEEEeeCCCCCCCCCcEE-eecCCCCCCC
Q psy8771         790 IWVLAGTSIGDGPSSYPIT-IRTHEDDPSE  818 (904)
Q Consensus       790 ~~V~a~~~~g~g~~s~~~~-~~t~~~~P~~  818 (904)
                      |+|+|.|..|.|.+|.... ++|.+.+|.+
T Consensus        87 frV~A~n~~G~s~~S~~~~~v~t~~~~P~~  116 (117)
T 1uem_A           87 FMVRAINPQGLSDPSPMSDPVRTQDSGPSS  116 (117)
T ss_dssp             EEEEEEETTEEEEECCCCCCEECCCSSCCC
T ss_pred             EEEEEECCCccCCCcCCCccEEccCCCCCC
Confidence            9999999999998888776 8888877753

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.4e-11  Score=102.09  Aligned_cols=90  Identities=22%  Similarity=0.297  Sum_probs=74.8

Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVL  793 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~  793 (904)
                      .|..+|.+|++..++.+++.|+|+++.     +.+.+|+|+|+..++...  ....+. ..+++.|.+|.|++.|.|+|.
T Consensus         6 ~p~~pP~~l~~~~vt~tsi~vsW~pp~-----~~i~~Y~I~y~~~~~~~~--~~~~v~~~~t~~~l~~L~p~T~Y~v~V~   78 (108)
T 2ee3_A            6 SGLAPPRHLGFSDVSHDAARVFWEGAP-----RPVRLVRVTYVSSEGGHS--GQTEAPGNATSAMLGPLSSSTTYTVRVT   78 (108)
T ss_dssp             CCCCCSSCEEEESCCSSCEEEEESCCS-----SCCSEEEEEEEETTTCCB--CCEEEETTCCEEEECSCCSSCEEEEEEE
T ss_pred             cCCCCCceEEEEEccCCeEEEEeeCCC-----CCccEEEEEEEeCCCCce--eEEEcCCCcCEEEcCCCCCCCEEEEEEE
Confidence            356689999999999999999999873     679999999998765332  223445 788999999999999999999


Q ss_pred             EeeCCCCCCCCCcEEeecC
Q psy8771         794 AGTSIGDGPSSYPITIRTH  812 (904)
Q Consensus       794 a~~~~g~g~~s~~~~~~t~  812 (904)
                      |.|..|.|+.+. ..++|.
T Consensus        79 A~~~~g~s~p~~-~~~~T~   96 (108)
T 2ee3_A           79 CLYPGGGSSTLT-GRVTTK   96 (108)
T ss_dssp             EECTTSCEEEEE-EEEECC
T ss_pred             EEeCCCcCCCcc-CEEEeC
Confidence            999999988775 468886

>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=99.25  E-value=1.8e-10  Score=109.76  Aligned_cols=170  Identities=9%  Similarity=0.067  Sum_probs=108.8

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC---CCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP---DDKLPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~---~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      .+|.|...|..  .+.+|++++|.|.+.+. .+.+.|+|+ +..+..   ..+....++.|.|.++  +|+|.|+|.+.|
T Consensus         3 ~~P~i~~~p~~--~v~~G~~v~L~C~~~~~-~~~~~w~k~-g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~   78 (188)
T 1oll_A            3 PKPFIWAEPHF--MVPKEKQVTICCQGNYG-AVEYQLHFE-GSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRV   78 (188)
T ss_dssp             CCCEEEEESCS--EEETTCCEEEEEECCTT-CCEEEEEET-TEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred             CCCEEEeecCC--cCCCCCCEEEEEecCCC-CCEEEEEEC-CCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecC
Confidence            46788877764  78899999999999875 468999999 544321   1112235678999999  699999999998


Q ss_pred             cCcce--EEEEEEEEEeecCCCCCCCCCCcceEE----EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecce
Q psy8771         178 VLGVI--ETSTIVKVQCKYAPLLTLPVAPLDVKI----SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGII  251 (904)
Q Consensus       178 ~~g~~--~~~~~l~v~~~~~~~~~~P~~p~~l~~----~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~  251 (904)
                      ..|..  +..+.|.|.       ..+.+|. +..    .......++|.+.....+. .  +.|...+............
T Consensus        79 ~~~~~~~s~~~~l~V~-------~~~~~p~-i~~~p~~~v~~G~~v~L~C~~~~~~~-~--~~w~k~g~~~~~~~~~~~~  147 (188)
T 1oll_A           79 GELWSEPSNLLDLVVT-------EMYDTPT-LSVHPGPEVISGEKVTFYCRLDTATS-M--FLLLKEGRSSHVQRGYGKV  147 (188)
T ss_dssp             TTEECCCCCCEEEEEE-------SCSCCCE-EEEESCSEEETTCEEEEEEECSSSCS-E--EEEEEESSSCEEEEEECSS
T ss_pred             CCCCCCCCCceEEEec-------ccCCCCe-EEECCCCccccCCEEEEEEEcCCCCC-E--EEEEECCccccccccCCCc
Confidence            76542  445666766       2222221 111    1134567888888654332 3  3343332222211122344


Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCC-CCCCCCCCeEE
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNL-GRGPPSSPAVI  287 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~-g~s~~s~~~~~  287 (904)
                      ...|.|.+++..+.+.|+|.|.|.. ..+..|.++.+
T Consensus       148 ~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l  184 (188)
T 1oll_A          148 QAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKL  184 (188)
T ss_dssp             EEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEE
T ss_pred             eeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEE
Confidence            5789999999999999999999875 22344555444

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.25  E-value=2.2e-11  Score=106.42  Aligned_cols=113  Identities=20%  Similarity=0.374  Sum_probs=85.4

Q ss_pred             CCCCCCCCCeeEEecCCCCCCCCCCc--EEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-Cc
Q psy8771         698 RGEGATTPPIPVRTKQYVPGAPPQNV--SCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQ  774 (904)
Q Consensus       698 ~G~~~~s~~~~~~t~~~~p~~~P~~l--~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~  774 (904)
                      .|.+..+..+.+.+.   |. +|.++  .+...+.+++.|+|.++  ...++++.+|.|+|+..+ ..+......+. ..
T Consensus         3 ~G~~~~s~~l~v~~~---P~-~P~~~~~~~~~~~~~sv~l~W~~p--~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~   75 (121)
T 1wf5_A            3 SGSSGRSAHLRVRQL---PH-APEHPVATLSTVERRAINLTWTKP--FDGNSPLIRYILEMSENN-APWTVLLASVDPKA   75 (121)
T ss_dssp             CCCCCCCCCSSCCCC---CC-CCSSCEEEECSSSTTEEEEECCCC--CCCSSCEEEEEEEEECTT-CCCEEEESSCCTTC
T ss_pred             CCcccceEEEEEeeC---Cc-cCCCcceeeEeccCCEEEEEEcCC--CCCCCcceEEEEEEEcCC-CCceEeEcccCCCc
Confidence            344444544544433   43 67888  88888999999999988  456778999999999875 22211101233 77


Q ss_pred             ceEEecCCCCCceEEEEEEEeeCCCCCCCCCcE-EeecCCCCCC
Q psy8771         775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPI-TIRTHEDDPS  817 (904)
Q Consensus       775 ~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~-~~~t~~~~P~  817 (904)
                      +.++|.+|.|++.|.|+|+|.|..|.|.+|... .++|.+.+|+
T Consensus        76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~~P~  119 (121)
T 1wf5_A           76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPESGPS  119 (121)
T ss_dssp             CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCCSSC
T ss_pred             cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCCCCC
Confidence            899999999999999999999999999999876 5888888774

>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D

Probab=99.25  E-value=8.3e-10  Score=115.40  Aligned_cols=163  Identities=12%  Similarity=0.052  Sum_probs=106.2

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEec
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      ...+|.|...|.  ..+.+|++++|.|.+.|. .+.+.|+|+ +..+....+.....+.|.|.++  +|+|.|+|.|.|.
T Consensus        21 ~~~~P~i~~~p~--~~v~~G~~v~L~C~~~~~-~~~~~W~k~-g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~   96 (316)
T 3vh8_G           21 GQDKPFLSAWPS--AVVPRGGHVTLRCHYRHR-FNNFMLYKE-DRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHP   96 (316)
T ss_dssp             ---CCEEEEESC--SEEETTSCEEEEEEBTTB-CCSEEEEES-SCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCS
T ss_pred             CCCCCEeeccCC--CccCCCCCEEEEEEccCC-CceEEEEeC-CCccceeecCCcceEEEEECCCCcccCeEEEEEEEcC
Confidence            457888888887  567899999999999998 678999999 5544332222335778999999  6999999999864


Q ss_pred             Cc-----ceEEEEEEEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE---
Q psy8771         179 LG-----VIETSTIVKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE---  246 (904)
Q Consensus       179 ~g-----~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~---  246 (904)
                      .+     ..+....|.|.       ..+.+|. +...    ......++|.+.....+ ..|.  |...+.......   
T Consensus        97 ~~~~~~~~~s~~~~l~V~-------~~~~~p~-~~~~~~~~v~~G~~v~L~C~~~~~~-~~~~--w~k~g~~~~~~~~~~  165 (316)
T 3vh8_G           97 HSPTGWSAPSNPVVIMVT-------GNHRKPS-LLAHPGPLVKSGERVILQCWSDIMF-EHFF--LHKEGISKDPSRLVG  165 (316)
T ss_dssp             SSSSSBCCCCCCEEEEEE-------CSSCCCE-EEEESCSEEETTCCEEEEEEESSCC-SEEE--EEETTCCSCCEEEEC
T ss_pred             CCCcceecCCCcEEEEEe-------cCCCCCe-EEecCCCccCCCCeEEEEEcCCCCC-cEEE--EEECCCccccceeee
Confidence            32     34455667776       3322222 1111    12345677888765332 2333  333322221111   


Q ss_pred             --eecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         247 --ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       247 --~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                        ........|.|.++...+.+.|+|.|.|..|.
T Consensus       166 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~  199 (316)
T 3vh8_G          166 QIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTP  199 (316)
T ss_dssp             EEETTEEEEEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred             eecCCCceEEEEECCCChhhCceEEEEEecCCCC
Confidence              11234577999999999999999999999875

>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A

Probab=99.25  E-value=7.3e-11  Score=113.44  Aligned_cols=152  Identities=18%  Similarity=0.232  Sum_probs=107.2

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC--------------CC--ceecccccccccceEEEEeeeccCCeeeeeeeeccCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP--------------NG--QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADP   99 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~--------------~g--~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~   99 (904)
                      ....|.|...+.+...|.|.+....              ++  .+........+.....|...+..........+.+.. 
T Consensus        21 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~-   99 (194)
T 2a38_A           21 STATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKA-   99 (194)
T ss_dssp             SCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred             CEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEcc-
Confidence            5667777776777789999775321              11  123333344444444455544333333344444432 


Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEE
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTC  173 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c  173 (904)
                       ...+|.+...+.. ..+..|+.+.|.|.+.|.|.|.+.|+++ +..+....++...    ...|.|.++  +|+|.|+|
T Consensus       100 -~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C  176 (194)
T 2a38_A          100 -ETAPPNFVQRLQS-MTVRQGSQVRLQVRVTGIPTPVVKFYRD-GAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSV  176 (194)
T ss_dssp             -CCEEEEEEECCCC-EEECTTEEEEEEEEEEEESCCEEEEEET-TEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEE
T ss_pred             -CCCCCEEEeCCcc-EEEcCCCEEEEEEEEEEecCCeEEEEEC-CEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEE
Confidence             2467888888877 8999999999999999999999999999 7777666665542    227999999  69999999


Q ss_pred             EEEecCcceEEEEEEEEE
Q psy8771         174 IAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~  191 (904)
                      .|.|..|.....+.|.|+
T Consensus       177 ~a~n~~g~~~~~~~l~V~  194 (194)
T 2a38_A          177 NATNSVGRATSTAELLVQ  194 (194)
T ss_dssp             EEEETTEEEEEEEEEEEC
T ss_pred             EEEeCCCceEEEEEEEEC
Confidence            999999998888888763

>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A

Probab=99.25  E-value=4.5e-11  Score=115.29  Aligned_cols=154  Identities=14%  Similarity=0.210  Sum_probs=105.5

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCC--------------CCC--ceecccccccccceEEEEeeeccCCeeeeeeeeccCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPET--------------PNG--QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADP   99 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~--------------~~g--~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~   99 (904)
                      ....|.|...+.+...+.|.+...              .+|  .+........+.....|...+........+.+.+...
T Consensus        20 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~   99 (197)
T 2j8h_A           20 SNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVP   99 (197)
T ss_dssp             SCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred             CEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCC
Confidence            566777777777888999977521              122  2333334444555555555544332334444554332


Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEee-e--cCCeEEE
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDR-V--TESENYT  172 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~-l--~d~g~Y~  172 (904)
                      .....|.+...+.. ..+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+    ..+.|.|.+ +  +|+|.|+
T Consensus       100 p~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~  177 (197)
T 2j8h_A          100 AKIHLPKTLEGMGA-VHALRGEVVSIKIPFSGKPDPVITWQKG-QDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYV  177 (197)
T ss_dssp             EEECCSSCBTTBEE-EEEETTCCCEEEEEEEEESCCEEEEEES-SCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEE
T ss_pred             CcCCCCccccccCe-EEEeCCCEEEEEEEEEecCCCcEEEEEC-CEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEE
Confidence            22223333333344 7889999999999999999999999999 777766656553    456899998 7  6999999


Q ss_pred             EEEEecCcceEEEEEEEEE
Q psy8771         173 CIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|.|..|..+..+.|.|.
T Consensus       178 C~a~N~~g~~~~~~~l~V~  196 (197)
T 2j8h_A          178 VCAKNRFGIDQKTVELDVA  196 (197)
T ss_dssp             EEEEETTEEEEEEEEEEEE
T ss_pred             EEEEeCCCcEeEEEEEEEe
Confidence            9999999999888888875

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}

Probab=99.24  E-value=8.3e-11  Score=98.65  Aligned_cols=90  Identities=23%  Similarity=0.368  Sum_probs=75.3

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc-c-ceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA-K-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSP  697 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~  697 (904)
                      .+.+|.+|++.+++.+++.|+|.++...++.+.+|.|+|...+... . ........++++|.+|+|++.|.|+|+|+|.
T Consensus         7 ~~~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~~   86 (103)
T 3t04_D            7 VSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAYDT   86 (103)
T ss_dssp             CCCCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEESC
T ss_pred             cCCCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence            5689999999999999999999998877889999999999875432 2 2334456789999999999999999999999


Q ss_pred             --CCCCCCCCCeeEE
Q psy8771         698 --RGEGATTPPIPVR  710 (904)
Q Consensus       698 --~G~~~~s~~~~~~  710 (904)
                        .|.++ |.++.+.
T Consensus        87 ~~~G~~~-S~p~~~~  100 (103)
T 3t04_D           87 FFPGYEP-NSPISIN  100 (103)
T ss_dssp             CCTTCCC-SCCEEEE
T ss_pred             CCCCCCC-CCCEEEe
Confidence              88887 6666543

>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}

Probab=99.24  E-value=8.8e-11  Score=117.43  Aligned_cols=153  Identities=16%  Similarity=0.212  Sum_probs=103.0

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC---------------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP---------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPV  100 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~---------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~  100 (904)
                      ....|.|...+.+.+.|.|.+....               ++.++...+...+.....|...+..........+.+....
T Consensus        31 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~  110 (241)
T 3grw_A           31 NTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERS  110 (241)
T ss_dssp             SEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred             CeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccC
Confidence            5666777777777889999865211               1123333344445454555555443334444555554322


Q ss_pred             CCCCCeE-EcCCCCceEEecCCCeEEEEEEccCCCCeEEEee----CCccccCCCCcee------------ecceEEEEe
Q psy8771         101 RRVPPQF-SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK----GQNIELTPDDKLP------------VGRNVLTLD  163 (904)
Q Consensus       101 ~~~~P~~-~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k----~~~~~~~~~~~~~------------~~~~~l~i~  163 (904)
                       ..+|.+ ...+.. ..+.+|+.+.|.|.+.|.|.+.|.|++    + +..+.......            ...+.|.|.
T Consensus       111 -~~~~~~~~~~~~~-~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~  187 (241)
T 3grw_A          111 -PHRPILQAGLPAN-QTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVN-GSKVGPDGTPYVTVLKSWISESVEADVRLRLA  187 (241)
T ss_dssp             -CCCCEEEECTTCS-EECCTTCCEEEEEEEECSSCCEEEEEEECCSS-SCSSCTTTCCCEEEEEEEECSBSEEEEEEEEC
T ss_pred             -CCCceeecCCCcc-ceecCCCEEEEEEEEecCCCCEEEEEEcccCC-CcccCCCCceeeeeeeEeeeeecCCceEEEEC
Confidence             233444 444555 889999999999999999999999999    6 55554432211            135579999


Q ss_pred             ee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         164 RV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       164 ~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      ++  +|+|.|+|.|.|..|..+..+.|.|.
T Consensus       188 ~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~  217 (241)
T 3grw_A          188 NVSERDGGEYLCRATNFIGVAEKAFWLSVH  217 (241)
T ss_dssp             SCCGGGCEEEEEEEECSSCEEEEEEEEEC-
T ss_pred             cCCcccCcEEEEEEecCcceEEEEEEEEec
Confidence            98  69999999999999999999999998

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}

Probab=99.24  E-value=1.5e-10  Score=104.16  Aligned_cols=119  Identities=24%  Similarity=0.319  Sum_probs=87.3

Q ss_pred             CceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEe--c-CCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEE
Q psy8771         537 NNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVK--T-QQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISY  613 (904)
Q Consensus       537 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~--t-~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y  613 (904)
                      ..+++.+.+++ |+.|.|.++...          +.+-  + ....|.||.+|++..++.+++.|+|++|...+      
T Consensus       116 ~vts~~vgdg~-g~~~~~~~~~k~----------v~i~~~tq~ev~p~Pp~NL~At~VT~tSVtLsW~aP~~~~------  178 (238)
T 2w1n_A          116 SVTNSSVGDGE-GLVHEIAGTEKT----------VNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTE------  178 (238)
T ss_dssp             EEEEEEEECTT-SCEEECBCEEEE----------EEEECCCCCCCCCCCCEEEEEEEECSSCEEEEEECCSCCT------
T ss_pred             ceeeEEEecCC-CcEEEeecccee----------eeeccCCCCcCccCCCCceEEEEccCCeEEEEecCCCCCC------
Confidence            34678899999 999998776221          1111  1 22356889999999999999999999997632      


Q ss_pred             EEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEE
Q psy8771         614 ELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLA  693 (904)
Q Consensus       614 ~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~  693 (904)
                                                         + +.+|+|++...    .........++|++.+|+++|.|.|+|.
T Consensus       179 -----------------------------------G-I~gY~ly~~g~----~v~~v~~~~tsyt~~gLk~~TeYsF~V~  218 (238)
T 2w1n_A          179 -----------------------------------G-LEGYILYKDGK----KVAEIGKDETSYTFKKLNRHTIYNFKIA  218 (238)
T ss_dssp             -----------------------------------T-EEEEEEEETTE----EEEEEETTCCEEEECSCCTTCEEEEEEE
T ss_pred             -----------------------------------C-ceeEEEEeCCc----eeEEeeccceEEEecCCCCCCEEEEEEE
Confidence                                               3 66666665431    1122344557999999999999999999


Q ss_pred             EEcCCCCCCCCCCeeEEec
Q psy8771         694 AQSPRGEGATTPPIPVRTK  712 (904)
Q Consensus       694 a~~~~G~~~~s~~~~~~t~  712 (904)
                      |++..|.+.....+.++|.
T Consensus       219 A~d~~G~~Ss~e~vtVrTl  237 (238)
T 2w1n_A          219 AKYSNGEVSSKESLTLRTA  237 (238)
T ss_dssp             EEETTSCBCCCEEEEEECC
T ss_pred             EEeCCCCccccCcEEEEec
Confidence            9999998876667777764

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}

Probab=99.24  E-value=1.2e-10  Score=112.74  Aligned_cols=154  Identities=17%  Similarity=0.268  Sum_probs=109.1

Q ss_pred             CCCCcEEE-eccCCc-eEEEEeCCCCC--------------CCceecccccccccceEEEEeeeccCCeee---eeeeec
Q psy8771          36 APRDVQVR-PLSSST-MVIQWDEPETP--------------NGQITHPPTRAARSHARLAAQSVLRRGRLA---HAVRQV   96 (904)
Q Consensus        36 ~p~~l~~~-~~~~~s-~~v~W~~~~~~--------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~v   96 (904)
                      ....|.|. ..+.+. +.|.|.+....              ++.+........+.....|...+...+...   ...+.+
T Consensus        24 ~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~  103 (201)
T 3s97_C           24 KGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIP  103 (201)
T ss_dssp             CCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEE
T ss_pred             CCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceee
Confidence            44455555 445566 89999765311              333444444555555555665554433332   112221


Q ss_pred             --cCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEE
Q psy8771          97 --ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYT  172 (904)
Q Consensus        97 --~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~  172 (904)
                        .......+|.+...+.. ..+..|+.++|.|.+.|.|.|.|.|+++ +..+....++...++.|.|.++  +|+|.|+
T Consensus       104 ~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~  181 (201)
T 3s97_C          104 IPERTTKPYPADIVVQFKD-VYALMGQNVTLECFALGNPVPDIRWRKV-LEPMPSTAEISTSGAVLKIFNIQLEDEGIYE  181 (201)
T ss_dssp             ECCSSCCCEEEEEEEECCC-EEEETTCCEEEEEEEEEESCCEEEEEET-TBCCCTTCEEETTTTEEEECSCCGGGCEEEE
T ss_pred             ccccccCCCCCceEecCCc-eEEecCCcEEEEEEccCCCCCceEEEeC-CCcCCCceeecCCCCEEEEccCChhhCEEEE
Confidence              11233467777777766 9999999999999999999999999999 6677766667677889999999  6999999


Q ss_pred             EEEEecCcceEEEEEEEEE
Q psy8771         173 CIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|.|..|..+..+.|.|+
T Consensus       182 C~a~n~~g~~~~~~~l~V~  200 (201)
T 3s97_C          182 CEAENIRGKDKHQARIYVQ  200 (201)
T ss_dssp             EEEEETTEEEEEEEEEEEE
T ss_pred             EEEEecCCceeeeEEEEEe
Confidence            9999999999999888886

>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R

Probab=99.24  E-value=7.2e-12  Score=149.37  Aligned_cols=148  Identities=18%  Similarity=0.249  Sum_probs=30.9

Q ss_pred             CCCCcEEEecc--CCceEEEEeCCCCCCC----------------------ceecccccccccceEEEEeeeccCCeeee
Q psy8771          36 APRDVQVRPLS--SSTMVIQWDEPETPNG----------------------QITHPPTRAARSHARLAAQSVLRRGRLAH   91 (904)
Q Consensus        36 ~p~~l~~~~~~--~~s~~v~W~~~~~~~g----------------------~i~~~~~~~~~~~~~~~~~~~~~~g~~~~   91 (904)
                      ....|.|...+  .+.+.+.|.++.....                      .+........+.....|...+........
T Consensus       240 ~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~  319 (772)
T 3v2a_R          240 EKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNS  319 (772)
T ss_dssp             CCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEE
T ss_pred             CcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEE
Confidence            56667776655  5568999987743310                      12222233334444445544333223334


Q ss_pred             eeeeccCCCCCCCCeEEcCC---CCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--c
Q psy8771          92 AVRQVADPVRRVPPQFSIPP---PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--T  166 (904)
Q Consensus        92 ~~~~v~~~~~~~~P~~~~~~---~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~  166 (904)
                      +.+.+.     .+|.+...+   .. ..+.+|+.++|.|.+.|.|.+.|.|+|+ +..+....++. ....|.|.++  +
T Consensus       320 ~~l~V~-----~~p~~~~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-g~~l~~~~~~~-~~~~L~i~~v~~~  391 (772)
T 3v2a_R          320 TFVRVH-----EKPFVAFGSGMESL-VEATVGERVRIPAKYLGYPPPEIKWYKN-GIPLESNHTIK-AGHVLTIMEVSER  391 (772)
T ss_dssp             EEEEEE-----CCCC-----------------------------------------------------------------
T ss_pred             EEEEEe-----CCCeeEeccCCCCc-EEEcCCCcEEEEEEEeeeCCCeEEEEEC-CEeCCCCceEc-cceeEEEecCChh
Confidence            444443     355544332   23 7889999999999999999999999999 76666543333 4578999998  6


Q ss_pred             CCeEEEEEEEecCcceEEE--EEEEEE
Q psy8771         167 ESENYTCIAASVLGVIETS--TIVKVQ  191 (904)
Q Consensus       167 d~g~Y~c~a~n~~g~~~~~--~~l~v~  191 (904)
                      |+|.|+|.|.|..|....+  ..|.|.
T Consensus       392 d~G~Y~C~a~n~~g~~~~s~~~~l~v~  418 (772)
T 3v2a_R          392 DTGNYTVILTNPISKEKQSHVVSLVVY  418 (772)
T ss_dssp             ---------------------------
T ss_pred             cCceEEEEEEECCcCeEEEEEEEEEEe
Confidence            9999999999999876444  444444

>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}

Probab=99.23  E-value=9.4e-11  Score=112.13  Aligned_cols=152  Identities=21%  Similarity=0.321  Sum_probs=105.8

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC-------------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP-------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRR  102 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~-------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~  102 (904)
                      ....|.|...+.+...+.|.+....             ++.+....+...+.....|...+...+......+.+.   +.
T Consensus        18 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~---v~   94 (189)
T 2v5t_A           18 EDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI---VN   94 (189)
T ss_dssp             SCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEE---EE
T ss_pred             CcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEE---ec
Confidence            4555666666667788999765321             3334444455555555566666555554432222211   24


Q ss_pred             CCCeEEcCCCC-ceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEEe
Q psy8771         103 VPPQFSIPPPA-LLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       103 ~~P~~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      .+|.+...+.. ...+.+|+.+.|.|.+.|.|.|.|.|+++ +..+....++..  ..+.|.|.++  +|+|.|+|.|.|
T Consensus        95 ~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~-g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n  173 (189)
T 2v5t_A           95 VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRN-GKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATN  173 (189)
T ss_dssp             EEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEET-TEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEE
T ss_pred             CCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEEC-CEECcCCCcEEEecCCCEEEEcCCChhhCeeEEEEEEe
Confidence            46666655542 26778899999999999999999999999 777776666554  4668999998  699999999999


Q ss_pred             cCcceEEEEEEEEE
Q psy8771         178 VLGVIETSTIVKVQ  191 (904)
Q Consensus       178 ~~g~~~~~~~l~v~  191 (904)
                      ..|....++.|.|.
T Consensus       174 ~~g~~~~~~~l~V~  187 (189)
T 2v5t_A          174 KAGEDEKQAFLQVF  187 (189)
T ss_dssp             TTEEEEEEEEEEEE
T ss_pred             CCCceeEEEEEEEE
Confidence            99999988888876

>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}

Probab=99.23  E-value=4.2e-10  Score=114.08  Aligned_cols=229  Identities=10%  Similarity=0.100  Sum_probs=142.0

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      .|.|...|.+ +.+.+|+.+.|.|.+.|.|.+ .|+|+|+ +..+..      .+..|.|.++  +|+|.|+|.|.|..+
T Consensus         1 kP~i~~~p~~-~~v~~G~~v~l~C~~~~~~~~~~~~W~~~-g~~~~~------~~~~l~i~~~~~~d~G~Y~C~~~~~~~   72 (262)
T 3rjd_A            1 KAVITLQPPW-VSVFQEETVTLHCEVLHLPGSSSTQWFLN-GTATQT------STPSYRITSASVNDSGEYRCQRGLSGR   72 (262)
T ss_dssp             CCEEEESSCC-SEEETTCCEEEEEECSSCCCTTCEEEEET-TEECSC------CSSEEEESSCCGGGCEEEEEEESSSCC
T ss_pred             CCeEecCCCc-EEeeCCCeEEEEEECCCCCCCceEEEEEC-CEEeec------cCCeEEEecCCcccCeEEEEEEecCCc
Confidence            3678888888 899999999999999999988 9999999 665543      3678999998  699999999998665


Q ss_pred             ceEEEEEEEEEeecCCCCCCC--CCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCCCCCCeEEeecceeceEEE
Q psy8771         181 VIETSTIVKVQCKYAPLLTLP--VAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTV  257 (904)
Q Consensus       181 ~~~~~~~l~v~~~~~~~~~~P--~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i  257 (904)
                      ..  ...|.|.       ..+  ..|....+  .....+.|.+... +.+.  ..+.|...+  ....  .......+.|
T Consensus        73 s~--~~~l~v~-------~~~~~~~~~~~~~--~~g~~v~l~C~~~~~~p~--~~v~W~~~g--~~~~--~~~~~~~l~i  135 (262)
T 3rjd_A           73 SD--PIQLEIH-------RGWLLLQVSSRVF--TEGEPLALRCHAWKDKLV--YNVLYYRNG--KAFK--FFHWNSNLTI  135 (262)
T ss_dssp             CC--CEEEEEE-------CSSEEEEESCSEE--ETTSCEEEEEEEGGGCCC--EEEEEEETT--EEEE--EEEECCCEEE
T ss_pred             cc--cEEEEEe-------ccceEecCCCeEE--ecCCeEEEEEEccCCCCC--ceEEEEECC--cccc--ccCCCCeEEE
Confidence            43  4556665       111  01112222  2344567777653 2222  234444432  1111  1122467999


Q ss_pred             cCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEec----ccCCCeeEEEecCCCCCC-ce----eeEE
Q psy8771         258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVR----PLSSSTMVIQWDEPETPN-GQ----ITAK  328 (904)
Q Consensus       258 ~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~----~~~~~~v~l~W~~p~~~~-~~----~~~~  328 (904)
                      .+++..+.+.|+|.|.|..+...  ....+.....   .++..+...    ......+.|.+.....+. ..    +.++
T Consensus       136 ~~~~~~d~G~Y~C~~~n~~~~~~--~~~~l~V~~~---~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~  210 (262)
T 3rjd_A          136 LKTNISHNGTYHCSGMGKHRYTS--AGISVTVKEL---FPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFY  210 (262)
T ss_dssp             SSCCGGGCEEEEEEEESSSEEEE--ECEEEEEECS---SCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEE
T ss_pred             EECChhhCEEEEEEEeCCCCccc--cceEEEeccC---CCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEE
Confidence            99999999999999999875432  2222222211   011122221    223466788887654432 22    2222


Q ss_pred             E----EEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         329 H----HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       329 ~----~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                      .    .........+.|..+.....-.+.+.+.|..|.
T Consensus       211 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~  248 (262)
T 3rjd_A          211 MGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGN  248 (262)
T ss_dssp             ETTEEEEEEESCCEEEESSCCGGGCEEEEEEEEETTSS
T ss_pred             eCCcEecccCCCceEEEEEechhhCeEEEEEEEcccCc
Confidence            1    111122336788888888888888999988775

>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X

Probab=99.23  E-value=8.4e-11  Score=115.06  Aligned_cols=156  Identities=14%  Similarity=0.199  Sum_probs=106.9

Q ss_pred             eEEecCCCeEEEEEEccCC----CCeEEEeeCC---------------ccccCC-----CCceee-------cceEEEEe
Q psy8771         115 LEVMLDSPLNLSCVAVGSP----MPFVKWRKGQ---------------NIELTP-----DDKLPV-------GRNVLTLD  163 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p----~p~i~W~k~~---------------~~~~~~-----~~~~~~-------~~~~l~i~  163 (904)
                      +.+.+|+++.|.|.+.+.|    .+.|.|++++               +..+..     ..|+..       ++.+|.|.
T Consensus        10 v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~   89 (214)
T 3jz7_A           10 IEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVT   89 (214)
T ss_dssp             EEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEEC
T ss_pred             EEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEc
Confidence            8999999999999999988    4699999841               222221     234443       35689999


Q ss_pred             ee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEE-EeecCCeEEEEEeC-CCccceEEEEEEEeCC
Q psy8771         164 RV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKI-SEVTATSVRLDWTY-PSETLLYYVIQYKPKA  239 (904)
Q Consensus       164 ~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~-~~~~~~sv~l~W~~-~~~~~~~y~v~~~~~~  239 (904)
                      ++  +|+|.|+|.|.|..|..+....|.|.       ..|..+....- .......++|.+.. .+.+...  +.|...+
T Consensus        90 ~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~-------~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~--v~W~~~~  160 (214)
T 3jz7_A           90 NLQLSDIGTYQCKVKKAPGVANKKFLLTVL-------VKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQ--FEWQKLS  160 (214)
T ss_dssp             SCCGGGCEEEEEEEEETTEEEEEEEEEEEE-------CCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCE--EEEEECS
T ss_pred             cCChhhCeEEEEEEEeCCCccccEEEEEEE-------cCCCCceeeeecceecCCcEEEEecCCCCCCCCE--EEEEECC
Confidence            99  69999999999999988888889988       44443332211 12234568888887 3333333  4454432


Q ss_pred             CCCCeE--EeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         240 ANTPYS--EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       240 ~~~~~~--~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ......  .........+.|.++...+.+.|+|.|.|..|..
T Consensus       161 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~  202 (214)
T 3jz7_A          161 DSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSD  202 (214)
T ss_dssp             TTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred             CCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcE
Confidence            222111  1112234589999999999999999999998864

>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A

Probab=99.23  E-value=5e-11  Score=97.69  Aligned_cols=83  Identities=13%  Similarity=0.165  Sum_probs=69.2

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..+|.|..++.+ +.+.+|+.++|.|.+.+. .+.|.|+|+ |..+..+.++.+.    ...|.|.++  +|+|.|+|.|
T Consensus         3 ~~~~~~~~~~~~-~~v~~G~~v~l~C~v~~~-~~~v~W~k~-g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a   79 (93)
T 1waa_A            3 MALIEVEKPLYG-VEVFVGETAHFEIELSEP-DVHGQWKLK-GQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQA   79 (93)
T ss_dssp             CCCCCEEECCCC-EEEETTSCEEEEEEESSS-SCCCEEEET-TEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred             CCCcEeeccCcc-eEEeCCCCEEEEEEECCC-CCeEEEEEC-CEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEE
Confidence            457889999999 999999999999999874 478999999 7788777776642    247999999  7999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                      .|.    ..++.|.|.
T Consensus        80 ~n~----~~sa~L~V~   91 (93)
T 1waa_A           80 ANT----KSAANLKVK   91 (93)
T ss_dssp             TTE----EEEEEEEEE
T ss_pred             CCC----cEEEEEEEE
Confidence            874    467788876

>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R

Probab=99.23  E-value=9.9e-11  Score=122.33  Aligned_cols=204  Identities=12%  Similarity=0.081  Sum_probs=115.6

Q ss_pred             eecccccccccceEEEEeeeccCCeee-eeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEee
Q psy8771          64 ITHPPTRAARSHARLAAQSVLRRGRLA-HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRK  141 (904)
Q Consensus        64 i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k  141 (904)
                      ++...+...|...+.|.......|... .+.+.     +..+|.+...+.. ..+..|+.+.|.|.+. |.|.+.|.|++
T Consensus        81 L~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~-----v~~~P~~~~~~~~-~~~~~~~~~~~~C~~~~~~P~~~i~W~~  154 (313)
T 4fqp_A           81 LRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLR-----VLAKPQNTAEVQK-VQLTGEPVPMARCVSTGGRPPAQITWHS  154 (313)
T ss_dssp             EEECSCCGGGCEEEEEEEECSSSCEEEEEEEEC-----CBBCCEEEEEECC-BCCCSSCEEEEEEEEEEEBSCCEEEEEE
T ss_pred             EEECcCChhhCEEEEEEEeeccCcceeeeeeee-----eccCCcceecccc-eEeecCceEEEEEEccCccCCcEEEeec
Confidence            444444445555555544444444332 33333     3456777666666 7778899999999876 78999999999


Q ss_pred             CCccccCCCCceee-c------ceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEee
Q psy8771         142 GQNIELTPDDKLPV-G------RNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEV  212 (904)
Q Consensus       142 ~~~~~~~~~~~~~~-~------~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~  212 (904)
                      + +..+....+... .      ...|.|...  +|+|.|+|.|.|..+.......+.+...++|..... ++....+  .
T Consensus       155 ~-~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~-~~~~~~~--~  230 (313)
T 4fqp_A          155 D-LGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSIS-GYDNNWY--L  230 (313)
T ss_dssp             T-TCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEE-CCCSCEE--T
T ss_pred             C-CccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccc-cccceee--c
Confidence            9 554433322221 1      234777766  589999999999877654444333322122211111 1111111  2


Q ss_pred             cCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         213 TATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       213 ~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ....++|.+...+.+.. ..|.|...+......  .......|.|.++...+.+.|+|.|.|..|...
T Consensus       231 ~g~~v~l~C~~~g~P~p-~~v~W~~~~~~l~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~  295 (313)
T 4fqp_A          231 GQNEATLTCDARSNPEP-TGYNWSTTMGPLPPF--AVAQGAQLLIRPVDKPINTTLICNVTNALGARQ  295 (313)
T ss_dssp             TCCCEEEEEEEEEESCC-CEEEEEETTBSCCTT--EEEETTEEEECCCSSCCEEEEEEEEECSSCEEE
T ss_pred             CCCeEEEEEEecCCCCC-cEEEEEECCEECCCc--eEEeCCEEEECcCChhhCEEEEEEEEeCCCcEE
Confidence            23445555554322111 124444433221111  112235799999999999999999999999754

>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}

Probab=99.23  E-value=1.3e-10  Score=111.86  Aligned_cols=148  Identities=16%  Similarity=0.251  Sum_probs=103.0

Q ss_pred             CCCCcEEEec-cCCceEEEEeCCCCC---C--------------------CceecccccccccceEEEEeeeccCCeeee
Q psy8771          36 APRDVQVRPL-SSSTMVIQWDEPETP---N--------------------GQITHPPTRAARSHARLAAQSVLRRGRLAH   91 (904)
Q Consensus        36 ~p~~l~~~~~-~~~s~~v~W~~~~~~---~--------------------g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~   91 (904)
                      ....|.|... +.+.+.|.|.+....   +                    +.+........+.....|...+........
T Consensus        18 ~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~   97 (195)
T 2c5d_C           18 LTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQ   97 (195)
T ss_dssp             CCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEEECC
T ss_pred             CcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCceecc
Confidence            5566667666 677788999764211   0                    122223333334444445444432222222


Q ss_pred             -eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeeecCCe
Q psy8771          92 -AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESE  169 (904)
Q Consensus        92 -~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g  169 (904)
                       +.+.+     ..+|.|...|.+ ..+.+|+.+.|.|.+.|.|.| .|.|+|+ +..+....+. ...+.|.|.+++|+|
T Consensus        98 ~~~l~V-----~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~~v~W~~~-~~~~~~~~~~-~~~~~L~i~~~~d~G  169 (195)
T 2c5d_C           98 PGYVGL-----EGLPYFLEEPED-RTVAANTPFNLSCQAQGPPEPVDLLWLQD-AVPLATAPGH-GPQRSLHVPGLNKTS  169 (195)
T ss_dssp             CEEEEE-----CCSCEEEECCCC-EEECTTCCEEEEEEEECSSCCCEEEEEES-SCBSSSSTTS-SCCEEEEECCCSSCE
T ss_pred             cEEEEE-----ecCCeEEcCCCc-EEEcCCCEEEEEeECCCCCCCCEEEEEEC-CEeccCCCCc-CCCCeEEEcccccCc
Confidence             34443     567899888888 999999999999999999999 9999999 6666554433 567899999999999


Q ss_pred             EEEEEEEecCcceE-EEEEEEEE
Q psy8771         170 NYTCIAASVLGVIE-TSTIVKVQ  191 (904)
Q Consensus       170 ~Y~c~a~n~~g~~~-~~~~l~v~  191 (904)
                      .|+|.|.|..|... ..+.|.|.
T Consensus       170 ~Y~C~a~N~~g~~~s~~~~l~V~  192 (195)
T 2c5d_C          170 SFSCEAHNAKGVTTSRTATITVL  192 (195)
T ss_dssp             EEEEEEEETTEEEECCCEEEEEC
T ss_pred             eEEEEEEcCCCceEEEEEEEEEe
Confidence            99999999999875 67777763

>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*

Probab=99.23  E-value=1.1e-11  Score=119.23  Aligned_cols=110  Identities=14%  Similarity=0.133  Sum_probs=73.1

Q ss_pred             ccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC
Q psy8771          69 TRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT  148 (904)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~  148 (904)
                      ....|.....|...+..+.....+.+.|     ..||.+...+.+ ..+.+|+.++|.|.+.|.|.|.|+|+++++....
T Consensus        76 v~~~D~G~Y~C~a~n~~g~~~~~~~l~V-----~~p~~~~~~~~~-~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~  149 (203)
T 4fa8_A           76 ANISHDGNYLCRMKLGETEVTKQEHLSV-----VKPLTLSVHSER-SQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPA  149 (203)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEEEEE-----EEEEEEEEEEEE-CCSSCSCCEEEEEEEEEESCCEEEECCC------
T ss_pred             CCHHHCeEEEEEEEcCCCcEEEEEEEEe-----cCCceeeeccee-EEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecC
Confidence            3444545555554443333334445554     457778777777 8889999999999999999999999987444322


Q ss_pred             ---CCCceee-cceEEEE---eee--cCCeEEEEEEEecCcceEE
Q psy8771         149 ---PDDKLPV-GRNVLTL---DRV--TESENYTCIAASVLGVIET  184 (904)
Q Consensus       149 ---~~~~~~~-~~~~l~i---~~l--~d~g~Y~c~a~n~~g~~~~  184 (904)
                         .+.|+.+ .+++|.|   .++  +|+|.|+|.|.|..|+.+.
T Consensus       150 ~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~  194 (203)
T 4fa8_A          150 PTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG  194 (203)
T ss_dssp             ------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred             cccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence               2345543 4555544   566  6999999999999998765

>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}

Probab=99.23  E-value=2.7e-10  Score=119.86  Aligned_cols=185  Identities=15%  Similarity=0.093  Sum_probs=118.5

Q ss_pred             Ccceeeeccce----EE-EEecCCCCCcce-eeEeeCCCCCCCCcEEEeccCC-ceEEEEeCCCCC-----------CCc
Q psy8771           2 DTRCYVESPEE----VF-IILCPLPPLIPG-YILVTEPGTAPRDVQVRPLSSS-TMVIQWDEPETP-----------NGQ   63 (904)
Q Consensus         2 ~~~~~~~~~~~----~~-~~~~~~~p~~~~-~~~~~~p~~~p~~l~~~~~~~~-s~~v~W~~~~~~-----------~g~   63 (904)
                      .|+|.+.+..+    .. ..+...+|.+.. ........+....|.|...+.+ .+.|.|.+....           ++.
T Consensus       104 ~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~  183 (329)
T 3oq3_B          104 RYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQN  183 (329)
T ss_dssp             CEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTE
T ss_pred             cEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCE
Confidence            58999999772    11 123334454422 2222233346677777777877 899999875311           233


Q ss_pred             eecccccccccceEEEEeeec--cCCeeee----eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCC---C
Q psy8771          64 ITHPPTRAARSHARLAAQSVL--RRGRLAH----AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSP---M  134 (904)
Q Consensus        64 i~~~~~~~~~~~~~~~~~~~~--~~g~~~~----~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p---~  134 (904)
                      +........|.....|...+.  .++....    +.+.+........|.+  .|.. ..+.+|+.++|.|.+.|.|   .
T Consensus       184 L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~--~~~~-~~v~~G~~~~l~C~~~g~p~~~~  260 (329)
T 3oq3_B          184 LIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI--LDPK-INVTIGEPANITCTAVSTSLLVD  260 (329)
T ss_dssp             EEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE--CCSE-EEECTTSCEEEEEEEEETTCCTT
T ss_pred             EEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee--cCCe-eEEecCCCEEEEEEEEECCCCCC
Confidence            333344445555566666654  4444333    3444432211111333  5555 8999999999999999998   7


Q ss_pred             C-eEEEeeCCccc-cCCCCceee--------cceEEEEeee--cCCe-EEEEEEEecCcceEEEEEEEE
Q psy8771         135 P-FVKWRKGQNIE-LTPDDKLPV--------GRNVLTLDRV--TESE-NYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       135 p-~i~W~k~~~~~-~~~~~~~~~--------~~~~l~i~~l--~d~g-~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      | .|.|+|+ +.. +..+.+...        ..+.|.|.++  +|+| .|+|.|.|..|.....+.|.|
T Consensus       261 ~i~v~W~~~-g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v  328 (329)
T 3oq3_B          261 DVLIDWENP-SGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL  328 (329)
T ss_dssp             CCEEEEECT-TSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred             CcEEEEEEC-CeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence            7 8999999 554 444433221        4678999999  6999 999999999999888888776

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}

Probab=99.23  E-value=4.5e-11  Score=126.67  Aligned_cols=164  Identities=16%  Similarity=0.064  Sum_probs=115.0

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEc-------cCCCCeEEEeeCCccc--cCC--CCceeecceEEEEeee--cCC
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAV-------GSPMPFVKWRKGQNIE--LTP--DDKLPVGRNVLTLDRV--TES  168 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~-------g~p~p~i~W~k~~~~~--~~~--~~~~~~~~~~l~i~~l--~d~  168 (904)
                      ...|.|...|.+ +.+.+|+++.|.|.+.       |.|.+.|.|+|+ +..  +..  ..++...++.|.|.++  +|+
T Consensus        16 ~~~p~~~~~~~~-~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~   93 (339)
T 3o4o_C           16 RSCRFRGRHYKR-EFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKN-DSARTVPGEEETRMWAQDGALWLLPALQEDS   93 (339)
T ss_dssp             --CEEEEECSCC-EEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEES-SCCSCCSCCSSSCEEEETTEEEESSBCTTCC
T ss_pred             hhhHhhCcCceE-EEEECCccEEEEeccccccccccCCCCceEEEEEC-CCCcccCccccccEEeeCCeEEECCCCcccC
Confidence            456889888888 9999999999999998       999999999999 444  332  3456667889999999  699


Q ss_pred             eEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCC---cceEEEeecCCeEEEEEe-----CCCccceEEEEEEEeCCC
Q psy8771         169 ENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP---LDVKISEVTATSVRLDWT-----YPSETLLYYVIQYKPKAA  240 (904)
Q Consensus       169 g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p---~~l~~~~~~~~sv~l~W~-----~~~~~~~~y~v~~~~~~~  240 (904)
                      |.|+|.|.|..|.....+.|.|.       ..|..+   ............+.|.+.     ..+.+..  .+.|...+.
T Consensus        94 G~Y~C~~~n~~g~~~~~~~l~V~-------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~--~v~W~k~g~  164 (339)
T 3o4o_C           94 GTYVCTTRNASYCDKMSIELRVF-------ENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV--KIQWYKDSL  164 (339)
T ss_dssp             EEEECCEEETTEEEEEEEEEEEE-------CSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCC--CBCCEESSC
T ss_pred             EEEEEEEECCcceEEEEEEEEEE-------cCCCccccccccceEEECCCCEEEEecCCcccccCCCCc--eEEEecCCe
Confidence            99999999999988888888888       332211   011112234567788887     3322222  233333221


Q ss_pred             C-----CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         241 N-----TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       241 ~-----~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      .     ..+...  .....+.|.++...+.+.|+|.|.|..|.
T Consensus       165 ~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~  205 (339)
T 3o4o_C          165 LLDKDNEKFLSV--RGTTHLLVHDVALEDAGYYRCVLTFAHEG  205 (339)
T ss_dssp             BCCTTCSSEEEC--TTSSEEEESSCCGGGCEEEEEEEECCBTT
T ss_pred             eCCCCCceeEEc--CCcceEEEcccCHhhCeEEEEEEEECCCC
Confidence            1     111111  12257999999999999999999998874

>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*

Probab=99.23  E-value=3.8e-11  Score=116.01  Aligned_cols=164  Identities=13%  Similarity=0.156  Sum_probs=107.7

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEec
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      ...|.|...|.+ ..+.+|++++|.|.+.|.|.+. |.|+|+ +..+..      ..+.|.|.++  +|+|.|+|.|.| 
T Consensus         5 ~p~p~i~~~p~~-~~v~~G~~v~L~C~~~~~p~~~~v~W~k~-g~~l~~------~~~~L~i~~v~~~D~G~Y~C~a~n-   75 (204)
T 3sgj_C            5 LPKAVVFLEPQW-YRVLEKDSVTLKCQGAYSPEDQSTQWFHN-ESLISS------QASSYFIDAATVDDSGEYRCQTQL-   75 (204)
T ss_dssp             -CBCEEEEESCC-SEEETTCCEEEEEECCSSSSCCCEEEEET-TEEESC------CSSEEEESSCCGGGCEEEEEEETT-
T ss_pred             CCCCeEEEcCCC-eEEECCCCEEEEEcCCCCCCCcEEEEEEC-CEEccc------CccEEEEecccccCCEEEEEEeCC-
Confidence            345678777877 8999999999999999999876 999999 655543      2378999999  699999999987 


Q ss_pred             CcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCc-cceEEEEEEEeCCCCCCeEEeecceeceEEE
Q psy8771         179 LGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE-TLLYYVIQYKPKAANTPYSEISGIITTYYTV  257 (904)
Q Consensus       179 ~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i  257 (904)
                       +..+....|.|..  .+...  ..|. ..+.  ....++|.+..... +..  .+.|..++.  ...  .......+.|
T Consensus        76 -~~~s~~~~l~V~~--~p~~~--~~~~-~~v~--~G~~v~L~C~~~~~~p~~--~v~W~k~g~--~~~--~~~~~~~L~i  141 (204)
T 3sgj_C           76 -STLSDPVQLEVHI--GWLLL--QAPR-WVFK--EEDPIHLRCHSWKNTALH--KVTYLQNGK--GRK--YFHHNSDFYI  141 (204)
T ss_dssp             -SBCCCCEEEEEEC--SSEEE--ECSC-SEEE--TTCCEEEEEEEGGGCCCE--EEEEEETTE--EEE--EEEECCCEEE
T ss_pred             -CcccccEEEEEec--CceEe--cCCc-eeEe--CCCcEEEEEEecCCCCCc--eEEEEECCc--Eee--cccCCceEEE
Confidence             3445566777761  11111  1121 2232  34567777765422 222  344544321  111  1223467999


Q ss_pred             cCCCCCCeEEEEEEEEcCCCCCCCCCCeEEec
Q psy8771         258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT  289 (904)
Q Consensus       258 ~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t  289 (904)
                      .++...+.+.|+|.|.|..+. ..+..+.+..
T Consensus       142 ~~v~~~D~G~Y~C~a~n~~~~-~~s~~~~l~V  172 (204)
T 3sgj_C          142 PKATLKDSGSYFCRGLVGSKN-VSSETVQITI  172 (204)
T ss_dssp             SSCCGGGCEEEEEEEEETTEE-EECCCEEEEE
T ss_pred             CcCCcccCEEEEEEEEeCCCc-eecCcEEEEE
Confidence            999999999999999995442 2344444433

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.22  E-value=2.8e-11  Score=103.54  Aligned_cols=100  Identities=21%  Similarity=0.353  Sum_probs=76.8

Q ss_pred             CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEe-c-CcceEEecCCCCCceEEEE
Q psy8771         714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL-K-NQTSFVLDELKKWTEYRIW  791 (904)
Q Consensus       714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~-~-~~~~~~i~~L~p~t~Y~~~  791 (904)
                      .+|. +|.++++...+.+++.|+|++|.. ..++.+.+|.|+|+..+...+  ..... . ..+.+++.+|.+++.|.|+
T Consensus         6 ~~P~-~P~~l~~~~~~~~sv~l~W~~p~~-~g~~~i~~Y~v~~~~~~~~~w--~~~~~~~~~~~~~~v~~L~p~t~Y~fr   81 (110)
T 2yuw_A            6 SGTS-PPTLLTVDSVTDTTVTMRWRPPDH-IGAAGLDGYVLEYCFEGTEDW--IVANKDLIDKTKFTITGLPTDAKIFVR   81 (110)
T ss_dssp             CCSC-CCEEEEEEEECSSCEEEEEECCSS-CCSSCEEEEEEEEEETTCSSE--EECCSSCCCSSEEEECSCCTTCEEEEE
T ss_pred             CCCC-CCCccEEEeccCCeEEEEECCCCC-CCCCCccEEEEEEEECCCccc--eEeccccCccCEEEECCCCCCCEEEEE
Confidence            3444 688999999999999999999852 234579999999998765433  11111 2 6789999999999999999


Q ss_pred             EEEeeCCCCCCCCCcE-EeecCCCCCC
Q psy8771         792 VLAGTSIGDGPSSYPI-TIRTHEDDPS  817 (904)
Q Consensus       792 V~a~~~~g~g~~s~~~-~~~t~~~~P~  817 (904)
                      |+|.|..|.|.+|... .+++.+..|+
T Consensus        82 V~A~n~~G~s~~S~~~~~v~~~~~~P~  108 (110)
T 2yuw_A           82 VKAVNAAGASEPKYYSQPILVKESGPS  108 (110)
T ss_dssp             EEEEETTEECCCEECSSCEECCCCCCC
T ss_pred             EEEEcCCcCCCCcCCCCCEEecCCCCC
Confidence            9999999999888654 3556666664

>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}

Probab=99.22  E-value=1.2e-10  Score=97.11  Aligned_cols=83  Identities=14%  Similarity=0.162  Sum_probs=70.8

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceee--cce--EEEEeee--cCCeEEEEEEEecC
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPV--GRN--VLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~--~~~--~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      +..+|.+ +.+.+|+.+.|.|.+.|. |.|.|.|+|+ +..+....++.+  .++  .|.|.++  +|+|.|+|.|.|..
T Consensus         4 v~~~~~~-~~v~~G~~v~l~C~~~g~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~   81 (97)
T 2bk8_A            4 VSGQIMH-AVGEEGGHVKYVCKIENYDQSTQVTWYFG-VRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDY   81 (97)
T ss_dssp             EECCCCC-EEECTTCCEEEEEEEESCCTTCEEEEEET-TEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred             eeccCcC-EEEcCCCcEEEEEEEeccCCCCEEEEEEC-CEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCC
Confidence            4455666 999999999999999997 9999999999 777776666654  333  8999999  69999999999999


Q ss_pred             cceEEEEEEEEE
Q psy8771         180 GVIETSTIVKVQ  191 (904)
Q Consensus       180 g~~~~~~~l~v~  191 (904)
                      |.....+.|.|.
T Consensus        82 g~~~~~~~l~V~   93 (97)
T 2bk8_A           82 GEDSSYAELFVK   93 (97)
T ss_dssp             CEEEEEEEEEET
T ss_pred             CeEeEEEEEEEE
Confidence            999998888886

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.22  E-value=8.2e-11  Score=100.61  Aligned_cols=98  Identities=17%  Similarity=0.331  Sum_probs=77.9

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      .+|.+|.++++...+.+++.|+|.+|...++ .+.+|.|+|+....   ..|.....  ...+.+.+.+|.+++.|.|+|
T Consensus         6 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~---~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV   82 (110)
T 2yuw_A            6 SGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGT---EDWIVANKDLIDKTKFTITGLPTDAKIFVRV   82 (110)
T ss_dssp             CCSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTC---SSEEECCSSCCCSSEEEECSCCTTCEEEEEE
T ss_pred             CCCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCC---ccceEeccccCccCEEEECCCCCCCEEEEEE
Confidence            4568899999999999999999999876544 79999999998753   45655433  367789999999999999999


Q ss_pred             EEEeCCCCCCCCCcE-EEecCCCCC
Q psy8771         557 QAFTSVGPGPLSAPV-LVKTQQGVP  580 (904)
Q Consensus       557 ~a~~~~g~~~~S~~~-~~~t~~~~p  580 (904)
                      +|+|..|.|.+|... .+++....|
T Consensus        83 ~A~n~~G~s~~S~~~~~v~~~~~~P  107 (110)
T 2yuw_A           83 KAVNAAGASEPKYYSQPILVKESGP  107 (110)
T ss_dssp             EEEETTEECCCEECSSCEECCCCCC
T ss_pred             EEEcCCcCCCCcCCCCCEEecCCCC
Confidence            999999998887664 344444343

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A

Probab=99.21  E-value=1.2e-10  Score=111.61  Aligned_cols=162  Identities=15%  Similarity=0.199  Sum_probs=106.0

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEee-CCccccC-CCCceee-----cceEEEEeee--cCCeEEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRK-GQNIELT-PDDKLPV-----GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k-~~~~~~~-~~~~~~~-----~~~~l~i~~l--~d~g~Y~c  173 (904)
                      |+.|...|.+ +.+.+|+.+.|.|.+.|.| .+.|.|++ + +..+. ...++..     ....|.|.++  +|+|.|+|
T Consensus         2 p~~v~~~p~~-~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~-g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C   79 (191)
T 1epf_A            2 VLQVDIVPSQ-GEISVGESKFFLCQVAGDAKDKDISWFSPN-GEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKC   79 (191)
T ss_dssp             -CCEEEESSS-EEEETTCCEEEEEEECCCSCCCEEEEECTT-SCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred             ceEEEecCCC-cEEcCCCCEEEEEECCCCCCCceEEEEeCC-CccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEE
Confidence            4567777877 9999999999999999987 78999999 6 65554 4455543     3578999999  69999999


Q ss_pred             EEEecC-cceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC------CCeEE
Q psy8771         174 IAASVL-GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN------TPYSE  246 (904)
Q Consensus       174 ~a~n~~-g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~------~~~~~  246 (904)
                      .+.|.. +..+..+.|.|.  ..+...  ..|....+.  ....+.|.+...+.+...  +.|...+..      ..+..
T Consensus        80 ~~~~~~~~~~~~~~~l~v~--~~p~~~--~~~~~~~~~--~g~~~~l~C~~~g~p~~~--v~W~~~~~~~~~~~~~~~~~  151 (191)
T 1epf_A           80 VVTAEDGTQSEATVNVKIF--QKLMFK--NAPTPQEFK--EGEDAVIVCDVVSSLPPT--IIWKHKGRDVILKKDVRFIV  151 (191)
T ss_dssp             EEEETTTEEEEEEEEEEEE--CCSEEE--ECCSSEECC--TTSCEEECCEEECSSCCE--EEEEETTEEGGGGCCTTEEE
T ss_pred             EEEcCCCcceEEEEEEEee--cCceEe--cCCCcEeec--CCCeEEEEEEECCCCCCE--EEEEECCEEeeccCCceEEE
Confidence            999998 456666666666  111111  123333332  233444555433222222  444433211      11111


Q ss_pred             eecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         247 ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       247 ~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      .   ....+.|.++...+.+.|+|.|.|..|.
T Consensus       152 ~---~~~~L~i~~~~~~d~G~Y~C~a~n~~~~  180 (191)
T 1epf_A          152 L---SNNYLQIRGIKKTDEGTYRCEGRILARG  180 (191)
T ss_dssp             C---TTSCEEETTCCGGGCEEEEEEEEEGGGT
T ss_pred             e---cCCeEEECCCChhhCEEEEEEEEEecce
Confidence            1   1246999999999999999999998753

>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R

Probab=99.21  E-value=3e-10  Score=118.59  Aligned_cols=88  Identities=22%  Similarity=0.252  Sum_probs=73.1

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      +..+|.|...+.....+..|+.++|.|.+.|.|.| .|+|+|+ +..+...  ....+++|.|.++  +|+|.|+|.|.|
T Consensus       213 V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~-~~~l~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~N  289 (313)
T 4fqp_A          213 VYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTT-MGPLPPF--AVAQGAQLLIRPVDKPINTTLICNVTN  289 (313)
T ss_dssp             BCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEET-TBSCCTT--EEEETTEEEECCCSSCCEEEEEEEEEC
T ss_pred             cccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEEC-CEECCCc--eEEeCCEEEECcCChhhCEEEEEEEEe
Confidence            35678876555444778889999999999999999 6999999 6666543  3345678999999  699999999999


Q ss_pred             cCcceEEEEEEEEE
Q psy8771         178 VLGVIETSTIVKVQ  191 (904)
Q Consensus       178 ~~g~~~~~~~l~v~  191 (904)
                      ..|..+.++.|.|.
T Consensus       290 ~~G~~~~~~~l~V~  303 (313)
T 4fqp_A          290 ALGARQAELTVQVK  303 (313)
T ss_dssp             SSCEEEEEEEEEEE
T ss_pred             CCCcEEEEEEEEEE
Confidence            99999999999998

>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}

Probab=99.21  E-value=1.8e-09  Score=121.77  Aligned_cols=235  Identities=11%  Similarity=0.102  Sum_probs=123.9

Q ss_pred             CCCCcEEEeccCCc--eEEEEeCCCCC--------------CCc------eecccccccccceEEEEeeeccCCeeeeee
Q psy8771          36 APRDVQVRPLSSST--MVIQWDEPETP--------------NGQ------ITHPPTRAARSHARLAAQSVLRRGRLAHAV   93 (904)
Q Consensus        36 ~p~~l~~~~~~~~s--~~v~W~~~~~~--------------~g~------i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   93 (904)
                      ....|.|...+.+.  ++|+|.+....              +|.      +........+.....|...+........+.
T Consensus       130 ~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~  209 (523)
T 2rcj_C          130 NKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA  209 (523)
T ss_pred             CceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCccccccee
Confidence            45566776665543  59999875321              111      111112222334444444443332222222


Q ss_pred             eeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccC-CCC-eEEEeeCCccccCC--CCceeec------ceEEEEe
Q psy8771          94 RQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PMP-FVKWRKGQNIELTP--DDKLPVG------RNVLTLD  163 (904)
Q Consensus        94 ~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~W~k~~~~~~~~--~~~~~~~------~~~l~i~  163 (904)
                      +.+. .....+|.+...+.. ..+.+|+.+.|.|.+.|. |.| .|+|+|+ +..+..  ..++...      ...|.|.
T Consensus       210 ~~~~-~~~~~~P~v~~~~~~-~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~-g~~~~~~~~~~~~~~~g~~~~~s~L~i~  286 (523)
T 2rcj_C          210 PTEC-SASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPQPVTVSWNSG-ALTSGVHTFPAVLQSSGLYSLSSVVTVP  286 (523)
T ss_pred             eeec-CCCCcCCEEEecCCC-cccccCCceEEEEEEeceeCCCeEEEEecC-CcccceEeCCcEecCCCcEEEEEEEEec
Confidence            2111 123567777644433 566899999999999997 888 8999999 544321  1112111      3479998


Q ss_pred             ee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceE-EEeecCCeEEEEEeCCCccc--eEEEEEEEeC
Q psy8771         164 RV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVK-ISEVTATSVRLDWTYPSETL--LYYVIQYKPK  238 (904)
Q Consensus       164 ~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~-~~~~~~~sv~l~W~~~~~~~--~~y~v~~~~~  238 (904)
                      ++  +| |.|+|.|.|..|.......|.+...  |.... .+|.... +..  ...+.|.+...+.+.  ....|.|...
T Consensus       287 ~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~--P~~~~-~~p~~~~~v~~--g~~~~l~C~~~g~~p~~~~~~v~W~k~  360 (523)
T 2rcj_C          287 SSSLGT-QTYICNVNHKPSNTKVDKRVEPLSL--PSVFL-FPPKPKDTLMI--SRTPEVTCVVVDVSHEDPQVKFNWYVD  360 (523)
T ss_pred             hhhcCC-ceEEEEEEeCCCCcceEEecCCCcC--ceEEe-cCCCchhhccc--CCceEEEEEEecccCCCCceEEEEEEC
Confidence            88  57 9999999999998776666655411  11000 1111111 111  223334443321110  0123444332


Q ss_pred             CCCC----Ce--EEeec---ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         239 AANT----PY--SEISG---IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       239 ~~~~----~~--~~~~~---~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      +...    ..  .....   .....+.|..+...+.+.|+|.|.|..+..
T Consensus       361 g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~  410 (523)
T 2rcj_C          361 GVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPA  410 (523)
T ss_pred             CeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCC
Confidence            2110    00  00000   112457888888899999999999987654

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.21  E-value=7e-11  Score=101.22  Aligned_cols=98  Identities=22%  Similarity=0.376  Sum_probs=77.9

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      .+|.+|.++++...+.+++.|+|.+|...++ .+.+|.|+|+....   ..|.....  ...+.+.+.+|.+++.|.|+|
T Consensus         7 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~---~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV   83 (111)
T 1x5y_A            7 GPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGS---EEWVPANKEPVERCGFTVKDLPTGARILFRV   83 (111)
T ss_dssp             SCCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTC---CCCEESSSSCBSSSEEEEECCCTTCCEEEEE
T ss_pred             CCCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCC---CceEEccccCCcccEEEECCCCCCCEEEEEE
Confidence            4568899999999999999999999876666 59999999988653   34554432  356789999999999999999


Q ss_pred             EEEeCCCCCCCCCcE-EEecCCCCC
Q psy8771         557 QAFTSVGPGPLSAPV-LVKTQQGVP  580 (904)
Q Consensus       557 ~a~~~~g~~~~S~~~-~~~t~~~~p  580 (904)
                      +|+|..|.|.+|... .+++....|
T Consensus        84 ~A~n~~G~s~~S~~~~~v~~~~~~P  108 (111)
T 1x5y_A           84 VGVNIAGRSEPATLLQPVTIRESGP  108 (111)
T ss_dssp             EEEETTEECCCCCCSSCBCCCCCCC
T ss_pred             EEEcCCcCCCCccCCCCEEecCCCC
Confidence            999999999888765 344444333

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=8.4e-11  Score=98.80  Aligned_cols=92  Identities=15%  Similarity=0.131  Sum_probs=74.0

Q ss_pred             CCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       198 ~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      +.++.+|.+|++.+++.+++.|+|+++.+.+.+|+|.|....+............+++.|.+|.|+++|.|+|.|.|..|
T Consensus         5 t~p~~pP~~l~~~~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~v~~~~t~~~l~~L~p~T~Y~v~V~A~~~~g   84 (108)
T 2ee3_A            5 SSGLAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYPGG   84 (108)
T ss_dssp             CCCCCCSSCEEEESCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEEEETTCCEEEECSCCSSCEEEEEEEEECTTS
T ss_pred             ccCCCCCceEEEEEccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEEcCCCcCEEEcCCCCCCCEEEEEEEEEeCCC
Confidence            35678999999999999999999999988999999999876443222222234558899999999999999999999999


Q ss_pred             CCCCCCCeEEecC
Q psy8771         278 RGPPSSPAVITTG  290 (904)
Q Consensus       278 ~s~~s~~~~~~t~  290 (904)
                      .+.++.. .+.|.
T Consensus        85 ~s~p~~~-~~~T~   96 (108)
T 2ee3_A           85 GSSTLTG-RVTTK   96 (108)
T ss_dssp             CEEEEEE-EEECC
T ss_pred             cCCCccC-EEEeC
Confidence            9876544 45554

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}

Probab=99.20  E-value=5.3e-11  Score=100.44  Aligned_cols=94  Identities=15%  Similarity=0.231  Sum_probs=74.9

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      +|..+.+. .+.+++.|+|.++  ++.+.+|.+|.|+|+..+...+. ....++ ..+.++|.+|.|++.|.|+|.|.|.
T Consensus        11 pP~~~~~~-~~~~sv~L~W~p~--~dggsPI~~Y~I~yr~~~~~~w~-~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~N~   86 (114)
T 2kbg_A           11 PPSIHGQP-SSGKSFKLSITKQ--DDGGAPILEYIVKYRSKDKEDQW-LEKKVQGNKDHIILEHLQWTMGYEVQITAANR   86 (114)
T ss_dssp             SCCEECCB-CSTTCEEEEECCC--CCSSSCCSEEEEEEEESSCCSCC-EEEEEETTTCCEEECCCCTTCCEEEEEEEECT
T ss_pred             CCcccccc-cCCCEEEEEEECC--CCCCCcccEEEEEEEeCCCCCcE-EeEEcCCCcCEEEEcCCCCCCEEEEEEEEEeC
Confidence            56555444 6899999999975  45677999999999998654442 334444 7788999999999999999999999


Q ss_pred             CCCCCCCCcEEeecCCCCCC
Q psy8771         798 IGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       798 ~g~g~~s~~~~~~t~~~~P~  817 (904)
                      .|.|.+|. ..++|...+|.
T Consensus        87 ~G~s~pS~-~~~~T~~~~~~  105 (114)
T 2kbg_A           87 LGYSEPTV-YEFSMPPKPNI  105 (114)
T ss_dssp             TSCEEEEE-EEECCCCCCSS
T ss_pred             CcCcCCcC-CEEEcCCCCce
Confidence            99999886 67888776663

>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D

Probab=99.19  E-value=2.2e-09  Score=112.13  Aligned_cols=233  Identities=11%  Similarity=0.093  Sum_probs=131.4

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC----------CCceecccccccccceEEEEeeecc----CC-eeeeeeeeccCCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP----------NGQITHPPTRAARSHARLAAQSVLR----RG-RLAHAVRQVADPV  100 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~----------~g~i~~~~~~~~~~~~~~~~~~~~~----~g-~~~~~~~~v~~~~  100 (904)
                      .+..|.|...+. ...+.|.+....          ++.++...+...|...+.|...+..    .+ ....+.+.+..  
T Consensus        39 ~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~--  115 (316)
T 3vh8_G           39 GHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTG--  115 (316)
T ss_dssp             SCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEEC--
T ss_pred             CCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEec--
Confidence            556666666555 678899776432          3344444455555555555543321    11 12233444432  


Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc---ee--ecceEEEEeee--cCCeEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK---LP--VGRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~---~~--~~~~~l~i~~l--~d~g~Y~c  173 (904)
                      ...+|.|...|.. . +.+|++++|.|.+.+ +.+.+.|+|+ +..+....+   ..  ...+.|.|.++  +|+|.|+|
T Consensus       116 ~~~~p~~~~~~~~-~-v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C  191 (316)
T 3vh8_G          116 NHRKPSLLAHPGP-L-VKSGERVILQCWSDI-MFEHFFLHKE-GISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRC  191 (316)
T ss_dssp             SSCCCEEEEESCS-E-EETTCCEEEEEEESS-CCSEEEEEET-TCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEE
T ss_pred             CCCCCeEEecCCC-c-cCCCCeEEEEEcCCC-CCcEEEEEEC-CCccccceeeeeecCCCceEEEEECCCChhhCceEEE
Confidence            2356778776664 4 889999999999954 5568999999 554432211   11  24568999998  69999999


Q ss_pred             EEEecCcce-----EEEEEEEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe
Q psy8771         174 IAASVLGVI-----ETSTIVKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY  244 (904)
Q Consensus       174 ~a~n~~g~~-----~~~~~l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~  244 (904)
                      .|.|..|..     +....|.|.       ..+.+| .+.+.    ......++|.+.... +...  +.|...+.....
T Consensus       192 ~a~n~~g~~~~s~~s~~~~l~V~-------~~~~~p-~i~~~~~~~v~~G~~v~L~C~~~~-~~~~--~~W~k~g~~~~~  260 (316)
T 3vh8_G          192 YGSVTHTPYQLSAPSDPLDIVVT-------GPYEKP-SLSAQPGPKVQAGESVTLSCSSRS-SYDM--YHLSREGGAHER  260 (316)
T ss_dssp             EEECTTCTTBCCCCCCCEEEEEE-------CSSCCC-EEEEESCSCCCTTSCCEEEEEESS-CCSE--EEEEETTSSCCE
T ss_pred             EEecCCCCccccCCCCCEEEEec-------CCCCCC-eEEeCCCCeecCCCcEEEEEECCC-CCcE--EEEEECCCcCCC
Confidence            999988752     445566666       333333 12221    112345566665542 2222  444444332222


Q ss_pred             EE-----eecceeceEEEcCCCCCCeEEEEEEEEcCCCC---CCCCCCeEEe
Q psy8771         245 SE-----ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR---GPPSSPAVIT  288 (904)
Q Consensus       245 ~~-----~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~---s~~s~~~~~~  288 (904)
                      ..     ..+.....+.|.++.  +.+.|+|.|.|..+.   +..|..+.+.
T Consensus       261 ~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~  310 (316)
T 3vh8_G          261 RLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVS  310 (316)
T ss_dssp             EEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC-
T ss_pred             ceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEE
Confidence            11     112233679999999  899999999998764   3445555443

>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4

Probab=99.19  E-value=2e-10  Score=109.01  Aligned_cols=145  Identities=21%  Similarity=0.349  Sum_probs=102.5

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC---C-------------CceecccccccccceEEEEeeeccCCee-eeeeeeccC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP---N-------------GQITHPPTRAARSHARLAAQSVLRRGRL-AHAVRQVAD   98 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~---~-------------g~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~v~~   98 (904)
                      ....|.|...+.+.+.+.|.+....   +             +.+........+.....|...+...... ..+.+.+  
T Consensus        18 ~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V--   95 (182)
T 1rhf_A           18 QPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTV--   95 (182)
T ss_dssp             CCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEE--
T ss_pred             CcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEE--
Confidence            5667777777778889999765211   1             1232333344444444455544322222 2344444  


Q ss_pred             CCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEEEEEe
Q psy8771          99 PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAAS  177 (904)
Q Consensus        99 ~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c~a~n  177 (904)
                         ..+|.+...+.. ..+.+|+.+.|.|.+.|.|.| .|.|+++ +..+....   .....|.|.+++|+|.|+|.|.|
T Consensus        96 ---~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~~v~W~~~-~~~~~~~~---~~~~~L~i~~~~d~G~Y~C~a~N  167 (182)
T 1rhf_A           96 ---EGVPFFTVEPKD-LAVPPNAPFQLSCEAVGPPEPVTIVWWRG-TTKIGGPA---PSPSVLNVTGVTQSTMFSCEAHN  167 (182)
T ss_dssp             ---ECSCEEEECCCC-EEECTTCCEEEEEEEECSSSCCEEEEEET-TEECSCSE---ESSEEEEECCCSSCEEEEEEEEE
T ss_pred             ---ecCCeEEecCcc-eEecCCCEEEEEeEecCCCCCCEEEEEcC-CeECCCCC---CCceEEEEeccccCeEEEEEEEC
Confidence               467899888888 999999999999999999999 9999999 66554322   26789999999999999999999


Q ss_pred             cCcceEE-EEEEEE
Q psy8771         178 VLGVIET-STIVKV  190 (904)
Q Consensus       178 ~~g~~~~-~~~l~v  190 (904)
                      ..|...+ .+.|.|
T Consensus       168 ~~g~~~s~~~~l~V  181 (182)
T 1rhf_A          168 LKGLASSRTATVHL  181 (182)
T ss_dssp             TTEEEECCCEEEEE
T ss_pred             CCCCcccceEEEEe
Confidence            9998753 777665

>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.19  E-value=4.7e-11  Score=101.11  Aligned_cols=88  Identities=17%  Similarity=0.198  Sum_probs=71.0

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccC---CCCeEEEeeCCccccCC--CCceee----------cceEEEEeee--
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGS---PMPFVKWRKGQNIELTP--DDKLPV----------GRNVLTLDRV--  165 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~---p~p~i~W~k~~~~~~~~--~~~~~~----------~~~~l~i~~l--  165 (904)
                      ..+.|+..|.+ +.+.+|++++|.|.+.|.   |.|.|+|+|++-..+..  ..++.+          ...+|+|.++  
T Consensus        11 ~~~~f~~~P~~-v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~   89 (118)
T 2edn_A           11 PTGVFLKKPDS-VSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVL   89 (118)
T ss_dssp             CSSSCSBCCCC-CEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCT
T ss_pred             CcceEEECCCC-eEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCCh
Confidence            34568888888 999999999999999986   78999999983222221  233332          2578999999  


Q ss_pred             cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         166 TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +|+|.|+|.|.|..|..+..+.|.|.
T Consensus        90 ~D~G~Y~Cevsn~~g~~s~~~~L~V~  115 (118)
T 2edn_A           90 GDRGYYRLEVKAKDTCDSCGFNIDVE  115 (118)
T ss_dssp             TTCSCEEEEEECSSCEEEEEECCEEE
T ss_pred             hhCEEEEEEEEEcCCcEEEEEEEEEE
Confidence            69999999999999999999999998

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4

Probab=99.18  E-value=2.6e-10  Score=126.03  Aligned_cols=248  Identities=15%  Similarity=0.114  Sum_probs=137.3

Q ss_pred             cceeeeccceEEEEecC----CCCCcce-e-eEeeCCCCCCCCcEEEeccCCce---EEEEeCCCCC-----------CC
Q psy8771           3 TRCYVESPEEVFIILCP----LPPLIPG-Y-ILVTEPGTAPRDVQVRPLSSSTM---VIQWDEPETP-----------NG   62 (904)
Q Consensus         3 ~~~~~~~~~~~~~~~~~----~~p~~~~-~-~~~~~p~~~p~~l~~~~~~~~s~---~v~W~~~~~~-----------~g   62 (904)
                      |+|.+.+.......-..    .+|.+.. . .......+....|.|...+.+..   .|.|.+....           ++
T Consensus        63 Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~  142 (450)
T 1z7z_I           63 PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEV  142 (450)
T ss_dssp             CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEE
T ss_pred             eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccce
Confidence            89999766543321111    2333211 0 00112223566777777776665   9999875211           12


Q ss_pred             ceecccccccccceEEEEeeeccCC---ee-----eeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccC-C
Q psy8771          63 QITHPPTRAARSHARLAAQSVLRRG---RL-----AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-P  133 (904)
Q Consensus        63 ~i~~~~~~~~~~~~~~~~~~~~~~g---~~-----~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p  133 (904)
                      .++....+..+.....|...+....   ..     ....+.+... ...+|.+..   . ..+.+|+.+.|.|.+.|. |
T Consensus       143 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~-~~~~p~~~~---~-~~v~~G~~v~l~C~~~g~~P  217 (450)
T 1z7z_I          143 TTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL-PATPPQLVS---P-RVLEVDTQGTVVCSLDGLFP  217 (450)
T ss_dssp             EEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCC-CSSCCEEEC---C-SEEETTSEEEEEEEEESCTT
T ss_pred             EEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeecc-CCCCCEecC---c-eeEEeCCcEEEEEEeeCCCC
Confidence            2333333334444444544433211   01     1122233221 134566543   2 678899999999999999 7


Q ss_pred             --CCeEEEeeCCccccCCCCceeecceEEEEe---ee--cCCe--EEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCC
Q psy8771         134 --MPFVKWRKGQNIELTPDDKLPVGRNVLTLD---RV--TESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP  204 (904)
Q Consensus       134 --~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~---~l--~d~g--~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p  204 (904)
                        .+.+.|+++ +..+..  ++......+.+.   ++  +|+|  .|+|.|.|..|..+..+.|.|.       ..|. |
T Consensus       218 ~~~~~~~W~~~-~~~~~~--~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~-------~~~~-p  286 (450)
T 1z7z_I          218 VSEAQVHLALG-DQRLNP--TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIY-------SFPA-P  286 (450)
T ss_dssp             GGGCEEEEEET-TEECCC--EEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEE-------CCCC-C
T ss_pred             CCceEEEEeCC-CEeCCc--eEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEe-------cCCC-C
Confidence              789999999 666654  343322233332   44  7999  9999999999999889999988       3222 2


Q ss_pred             cceEE---EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         205 LDVKI---SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       205 ~~l~~---~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      . +..   .......++|.+...+  .  -.+.|  .  +...  ........+.|..+...+.+.|+|.|.|..+
T Consensus       287 ~-i~~~~~~v~~G~~v~l~C~~~p--~--p~i~W--~--g~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~  351 (450)
T 1z7z_I          287 N-VILTKPEVSEGTEVTVKCEAHP--R--AKVTL--N--GVPA--QPLGPRAQLLLKATPEDNGRSFSCSATLEVA  351 (450)
T ss_dssp             E-EEESCSEEETTCEEEEEEEC--------------------------CCCCCEEEECCGGGTTCEEEEEEEEEET
T ss_pred             e-EecCCeeEeCCCcEEEEEecCC--C--CEeEE--C--CEEc--CCCCceEEEEEecCcccCCceEEEEEEcCCC
Confidence            1 111   1223456666666541  1  22444  1  1111  1112335799999999999999999997654

>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}

Probab=99.18  E-value=2.3e-10  Score=111.73  Aligned_cols=86  Identities=23%  Similarity=0.351  Sum_probs=72.1

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecc-----eEEEEeee--cCCeEEEEEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGR-----NVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~-----~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      |+.+...|.. ..+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+..     ..|.|.++  +|+|.|+|.|.
T Consensus       117 p~~~~~~~~~-~~v~~g~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~  194 (212)
T 2r15_A          117 ARVLGGLPDV-VTIQEGKALNLTCNVWGDPPPEVSWLKN-EKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVK  194 (212)
T ss_dssp             CEEEEBCCSE-EEEETTCCEEEEEEEECSSCCEEEEEET-TEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred             CcccccCCCc-EEEccCCeEEEEEEEcCCCCceEEEEEC-CeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEE
Confidence            4444445555 8999999999999999999999999999 77777766665532     38999999  69999999999


Q ss_pred             ecCcceEEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKVQ  191 (904)
Q Consensus       177 n~~g~~~~~~~l~v~  191 (904)
                      |..|.....+.|.|.
T Consensus       195 N~~g~~~~~~~l~V~  209 (212)
T 2r15_A          195 NKYGSETSDFTVSVF  209 (212)
T ss_dssp             ETTEEEEEEEEEEEE
T ss_pred             cCCCcEEEEEEEEEE
Confidence            999999888888887

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C

Probab=99.18  E-value=1e-08  Score=104.82  Aligned_cols=216  Identities=13%  Similarity=0.106  Sum_probs=129.5

Q ss_pred             eeccCCeEEEEEEEEeeCCCCCC-CCCCceeee--cCCCCCCCCCCeEEEecC-----------CceEEEEecCCCCCCC
Q psy8771         445 QALYPNTLYYIWLAAQSPRGEGA-TTPPIPVRT--KQYEPGTAPRDVQVRPLS-----------SSTMVIQWDEPETPNG  510 (904)
Q Consensus       445 ~~L~p~~~Y~~~v~a~~~~g~~~-~s~~~~~~t--~~~~p~~~p~~l~v~~~~-----------~~~~~l~W~~p~~~~~  510 (904)
                      ..|..+  |.++|++....|.+. +|.......  ....|+..|.+|...-.+           ...+..+|.+..+. .
T Consensus        70 ~~L~~~--~~~rVrt~~~~~~s~~~S~w~~~~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~~~-~  146 (317)
T 3qt2_A           70 TILHMG--FSASVRTILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGTDA-P  146 (317)
T ss_dssp             CCCTTC--EEEEEEEEEECSSCEEECCCEEEEECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCTTC-C
T ss_pred             cccCCC--eEEEEEEEECCCCCccccccccccccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeCCCCC-C
Confidence            344443  888888887765432 344433322  223455678899887665           47899999985432 2


Q ss_pred             ceeeEEEEEEeCCCCCCcceEEEee-c--CceEEEEcCCCC----CCeEEEEEEEEeCCCCCCCCCcEEEe-cCCCCCCC
Q psy8771         511 QITGYKVYYTQDQSLPMSAWETQVV-D--NNQLTTISDLTP----HTIYTIRVQAFTSVGPGPLSAPVLVK-TQQGVPSQ  582 (904)
Q Consensus       511 ~i~~Y~v~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~L~p----~t~Y~~~V~a~~~~g~~~~S~~~~~~-t~~~~p~~  582 (904)
                      ....|.+.|+....  ...+..... .  ....+.+.....    ...|.|.|.+.+..+.- .+....+. .....|.|
T Consensus       147 ~~t~Y~L~y~~~~~--~~eC~~y~~~~~~~~~~C~f~~~~~~~~~~~~~~i~V~gss~~~~i-~s~~~~~~l~~iVkp~P  223 (317)
T 3qt2_A          147 EDTQYFLYYRYGSW--TEECQEYSMDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAI-RPFDQLFALHAIDQINP  223 (317)
T ss_dssp             TTCEEEEEEEETTE--EEECCCEEECTTSCEEEEEESSCSCCTTCCSEEEEEEEEECTTSCB-CCEEEEEEHHHHBCCCC
T ss_pred             CCeeEEEEEEeCCC--CeeCCccccCCCcceeEEEeCCccccccCcEEEEEEEEcCCCCccc-cccceEEEHHHcCcCCC
Confidence            34679999987541  111211111 2  134677776532    46789999876654321 22222232 22245678


Q ss_pred             CCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCC
Q psy8771         583 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY  662 (904)
Q Consensus       583 p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~  662 (904)
                      |.+|.+... .+.+.|+|..|...                                        .......|+|+|+..+
T Consensus       224 P~nL~v~~~-~~~l~v~W~~P~~~----------------------------------------~~~~~L~Yevryr~~~  262 (317)
T 3qt2_A          224 PLNVTAEIE-GTRMSIQWEKPVSA----------------------------------------FPIHCFDYEVKIHNTR  262 (317)
T ss_dssp             CEEEEEEEE-TTEEEEEEECCSSS----------------------------------------SCGGGEEEEEEEEETT
T ss_pred             CceeEEEEe-CCcEEEEECCCCcc----------------------------------------cccCceEEEEEEEeCC
Confidence            889988754 57899999987420                                        1123468999999865


Q ss_pred             ccccceEEecccceEEEeCCCCCcEEEEEEEEEcCC-----C-CCCCCCCeeE
Q psy8771         663 AKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR-----G-EGATTPPIPV  709 (904)
Q Consensus       663 ~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~-----G-~~~~s~~~~~  709 (904)
                      ...+..... ..+.+.+ +|.|++.|.|+|+|....     | .|++|.++.+
T Consensus       263 ~~~~~~~~~-~~~~~~l-~l~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~  313 (317)
T 3qt2_A          263 NGYLQIEKL-MTNAFIS-IIDDLSKYDVQVRAAVSSMCREAGLWSEWSQPIYV  313 (317)
T ss_dssp             TCCEEEEEE-SSSEEEE-ECCTTCCEEEEEEEEECTTTSSCCCCCCCCCCEEE
T ss_pred             CCcceEEEE-eeeEEEe-ecCCCCEEEEEEEEeecCCCCCCCCcCCCCCCEEE
Confidence            443322222 2355655 599999999999999542     2 2455655544

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A

Probab=99.18  E-value=1.2e-10  Score=113.74  Aligned_cols=167  Identities=19%  Similarity=0.313  Sum_probs=111.0

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC------CceeecceEEEEe-----ee--cCC
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD------DKLPVGRNVLTLD-----RV--TES  168 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~------~~~~~~~~~l~i~-----~l--~d~  168 (904)
                      ..||.|...|.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+...      .++...++.+.+.     ++  +|+
T Consensus         7 ~~pp~i~~~p~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~   84 (212)
T 2v9r_A            7 DFPPRIVEHPSD-LIVSKGEPATLNCKAEGRPTPTIEWYKG-GERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE   84 (212)
T ss_dssp             CEEEEEEECCCC-EEECTTCCEEECCEEEEESCCEEEEEET-TEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSC
T ss_pred             cCCcceecCCCc-eEEeCCCcEEEEEEcCCCCCCEEEEEEC-CEEeeccccccccceEEecCCcEEEEEEEecCCCcccC
Confidence            568899999988 9999999999999999999999999999 5555432      2233345544443     33  699


Q ss_pred             eEEEEEEEecCcce-EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeC-CCccceEEEEEEEeCCCC----C
Q psy8771         169 ENYTCIAASVLGVI-ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY-PSETLLYYVIQYKPKAAN----T  242 (904)
Q Consensus       169 g~Y~c~a~n~~g~~-~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~-~~~~~~~y~v~~~~~~~~----~  242 (904)
                      |.|+|.|.|..|.. +....|.|.....   .....|....+  .....++|.+.. .+.+..  .+.|...+..    .
T Consensus        85 G~Y~C~~~n~~g~~~~~~~~l~V~~~~~---~~~~~~~~~~~--~~g~~~~l~C~~~~~~p~~--~v~W~~~~~~l~~~~  157 (212)
T 2v9r_A           85 GVYVCVARNYLGEAVSHDASLEVAILRD---DFRQNPSDVMV--AVGEPAVMECQPPRGHPEP--TISWKKDGSPLDDKD  157 (212)
T ss_dssp             EEEEEEEEETTEEEECCCEEEEECEECS---SCSBCCCCEEE--ETTSCEEEECBCCCEESCC--EEEEEETTEEECTTS
T ss_pred             eEEEEEEECCCCceeecceEEEEEeccc---cceeCCCceEe--cCCCcEEEEEecCCCCCCC--EEEEEECCccCCCCc
Confidence            99999999998875 4566777763211   11123334433  334567777765 322222  2444433211    1


Q ss_pred             CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         243 PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       243 ~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ....   .....+.|.++...+.+.|+|.|.|..|...
T Consensus       158 ~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~  192 (212)
T 2v9r_A          158 ERIT---IRGGKLMITYTRKSDAGKYVCVGTNMVGERE  192 (212)
T ss_dssp             TTEE---EETTEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred             ceEE---ccCCeEEEeeCCHhhCeeEEEEEecccCcee
Confidence            1111   1235799999999999999999999988643

>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}

Probab=99.18  E-value=2e-11  Score=129.42  Aligned_cols=238  Identities=14%  Similarity=0.171  Sum_probs=132.6

Q ss_pred             CCCCcEEEec-------cCCceEEEEeCCCCC--------------CCceecccccccccceEEEEeeeccCCeeeeeee
Q psy8771          36 APRDVQVRPL-------SSSTMVIQWDEPETP--------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVR   94 (904)
Q Consensus        36 ~p~~l~~~~~-------~~~s~~v~W~~~~~~--------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   94 (904)
                      ....|.|...       +.+.+.|.|.+....              ++.+........|.....|...+........+.+
T Consensus        34 ~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l  113 (339)
T 3o4o_C           34 EPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIEL  113 (339)
T ss_dssp             BCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEECCEEETTEEEEEEEEE
T ss_pred             ccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEEEEEECCcceEEEEEEE
Confidence            4555555554       667788899765322              2333333344444444444444333223334455


Q ss_pred             eccCCCCCCCCeEEcCCCCceEEecCCCeEEEEE-----EccCCCCeEEEeeCCccccCCC-Cceee--cceEEEEeee-
Q psy8771          95 QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCV-----AVGSPMPFVKWRKGQNIELTPD-DKLPV--GRNVLTLDRV-  165 (904)
Q Consensus        95 ~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~-----~~g~p~p~i~W~k~~~~~~~~~-~~~~~--~~~~l~i~~l-  165 (904)
                      .+.......++. .  ... ..+.+|+.+.|.|.     +.|.|.+.|.|+|+ +..+... .++..  +.+.|.|.++ 
T Consensus       114 ~V~~~~~~~~~~-~--~~~-~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~  188 (339)
T 3o4o_C          114 RVFENTDAFLPF-I--SYP-QILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKD-SLLLDKDNEKFLSVRGTTHLLVHDVA  188 (339)
T ss_dssp             EEECSCGGGHHH-H--CEE-EEEETTSCEEEECCSCTTTCCSSSCCCBCCEES-SCBCCTTCSSEEECTTSSEEEESSCC
T ss_pred             EEEcCCCccccc-c--ccc-eEEECCCCEEEEecCCcccccCCCCceEEEecC-CeeCCCCCceeEEcCCcceEEEcccC
Confidence            544321111011 1  112 57889999999999     89999999999999 6666544 45554  3358999999 


Q ss_pred             -cCCeEEEEEEEecCcc----eEEEEEEEEEeec---CCCCCCCCCCcceEEEeecCCeEEEEEeC-CCccceEEEEEEE
Q psy8771         166 -TESENYTCIAASVLGV----IETSTIVKVQCKY---APLLTLPVAPLDVKISEVTATSVRLDWTY-PSETLLYYVIQYK  236 (904)
Q Consensus       166 -~d~g~Y~c~a~n~~g~----~~~~~~l~v~~~~---~~~~~~P~~p~~l~~~~~~~~sv~l~W~~-~~~~~~~y~v~~~  236 (904)
                       +|+|.|+|.|.|..|.    ....+.|.|....   .|.+..+  +..+.+.....-.+.|.... .+.+. .-.+.|.
T Consensus       189 ~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~--~~~~~v~~G~~v~L~C~~~~~~g~P~-~~~v~W~  265 (339)
T 3o4o_C          189 LEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISP--LKTISASLGSRLTIPCKVFLGTGTPL-TTMLWWT  265 (339)
T ss_dssp             GGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCC--SCCCCCCCCSCCCCCCCEEESSSCCS-SCEEEEE
T ss_pred             HhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecC--CceeEeccCCCEEEEEEEECCCCCCC-CceEEEE
Confidence             6999999999998883    5667777776221   1111111  23332322322333333310 11110 1123333


Q ss_pred             eCCCCC-------CeEE-----ee-cce---eceEEEcCCCCCCe-EEEEEEEEcCCCCCCC
Q psy8771         237 PKAANT-------PYSE-----IS-GII---TTYYTVRNLSPYTE-YEFYIIAVNNLGRGPP  281 (904)
Q Consensus       237 ~~~~~~-------~~~~-----~~-~~~---~~~~~i~~L~p~~~-Y~~~v~a~n~~g~s~~  281 (904)
                      ..+...       ....     .. ...   ...|.|.++...+. +.|+|.|.|..|....
T Consensus       266 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~  327 (339)
T 3o4o_C          266 ANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTL  327 (339)
T ss_dssp             SSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECC
T ss_pred             ECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEE
Confidence            322110       0111     11 110   12699999999997 9999999999997543

>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}

Probab=99.18  E-value=9.3e-11  Score=122.26  Aligned_cols=207  Identities=14%  Similarity=0.102  Sum_probs=112.3

Q ss_pred             eecccccccccceEEEEeeeccCCeee-eeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEee
Q psy8771          64 ITHPPTRAARSHARLAAQSVLRRGRLA-HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRK  141 (904)
Q Consensus        64 i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k  141 (904)
                      ++...+...|...+.|...+...|... ...+.+.   ...++.+...+.. +....|+.+.|.|.+ .|.|.|.|+|+|
T Consensus        76 L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~---~~~~~~~~~~~~~-~~~~~~~~~~l~C~~~~g~P~~~i~W~~  151 (308)
T 4fom_A           76 ITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVL---VEPTVSLIKGPDS-LIDGGNETVAAICIAATGKPVAHIDWEG  151 (308)
T ss_dssp             EEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEE---BCCEEEEEECSSC-CCTTCSCEEEEEEEEEEEBSCCEEEECC
T ss_pred             EEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEee---eccccccccccce-eEEcCCceEEEEEEecCCcCCceEEEEE
Confidence            444444445555555655554444332 2233322   1122233444555 677788999999975 689999999999


Q ss_pred             CCccccCCCCcee-----ecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecC
Q psy8771         142 GQNIELTPDDKLP-----VGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTA  214 (904)
Q Consensus       142 ~~~~~~~~~~~~~-----~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~  214 (904)
                      + +..+.......     .....|.|.++  +|+|.|+|.|.|..|.......+.+.....|.......+ ...+  ...
T Consensus       152 ~-~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~-~~~~--~~g  227 (308)
T 4fom_A          152 D-LGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYD-GNWF--VGR  227 (308)
T ss_dssp             C-SSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCC-SCEE--TTC
T ss_pred             C-CcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccc-eeee--ecc
Confidence            9 55554322211     12346888877  699999999999887754444433322122222211111 1111  122


Q ss_pred             CeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         215 TSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       215 ~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..++|.+...+.+.. ..+.|...+...... ........+.|.++...+.+.|+|.|.|..|...
T Consensus       228 ~~v~l~C~~~g~P~p-~~v~W~k~~~~~~~~-~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~  291 (308)
T 4fom_A          228 KGVNLKCNADANPPP-FKSVWSRLDGQWPDG-LLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRS  291 (308)
T ss_dssp             CSCEEECCEEEESCE-EEEECCBSSSCCCSS-CBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEE
T ss_pred             ccEEEEEEEecCCCC-cEEEEEECCeECCCc-EEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEE
Confidence            344444443222111 123444332221111 1112234567889999999999999999999754

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.18  E-value=5e-11  Score=102.68  Aligned_cols=105  Identities=18%  Similarity=0.271  Sum_probs=83.3

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .+.+|.+|++.+++.+++.|+|.++.   +.+.+|.|.|...+............+.++|.+|+|++.|.|+|+|++..|
T Consensus         7 ~p~~P~~l~~~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~~~   83 (115)
T 2cuh_A            7 GPDGPTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPN   83 (115)
T ss_dssp             CCSSCEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSSCCEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTE
T ss_pred             CCCCCcceEEEeccCCeEEEEEECCC---CCccEEEEEEEcCCCCcEEEEECCCccEEEEeCCCCCCEEEEEEEEEeCCC
Confidence            56889999999999999999999864   468999999987654433344455678999999999999999999999887


Q ss_pred             CCCCCCCeeEEecCCCCCCCCCCcEEEecCCCE
Q psy8771         700 EGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTS  732 (904)
Q Consensus       700 ~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~  732 (904)
                      .+.+. .+.++|...    +|.+|++..++.++
T Consensus        84 ~s~~~-~~~~~T~~~----~P~~l~~~~vt~~s  111 (115)
T 2cuh_A           84 LTSPA-SITFTTGLE----APRDLEAKEVTPSG  111 (115)
T ss_dssp             ECCCE-EEEEESCCC----CTTTSSSCCCCCCC
T ss_pred             cCCCE-EEEEEeCCC----CCCCcEEEEecCCc
Confidence            76654 456666532    57888887776654

>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=4e-11  Score=100.22  Aligned_cols=75  Identities=19%  Similarity=0.326  Sum_probs=67.2

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +.+.+|+.++|.|.+.|.| |.|.|+|+ +..+....++.+..+.|.|.++  +|+|.|+|.|.|..|.....+.|.|.
T Consensus        13 ~~v~~G~~v~L~C~~~g~p-p~i~W~k~-g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~   89 (99)
T 2cr3_A           13 FLVHPGDLLQLRCRLRDDV-QSINWLRD-GVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVS   89 (99)
T ss_dssp             CCBCTTSCEEEECCCCSSC-CEEEEEES-SSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBC
T ss_pred             eEEeCCCcEEEEEEecCCC-CeEEEEEC-CEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEe
Confidence            7888999999999999988 79999999 7777777788777889999999  69999999999999998888888877

>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*

Probab=99.18  E-value=1.8e-10  Score=117.34  Aligned_cols=163  Identities=12%  Similarity=0.194  Sum_probs=97.5

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEc---cCCCCeEEEeeCCccccCC-----------------CCceee------cce
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAV---GSPMPFVKWRKGQNIELTP-----------------DDKLPV------GRN  158 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~---g~p~p~i~W~k~~~~~~~~-----------------~~~~~~------~~~  158 (904)
                      +.+...+.. +.+.+|++++|.|.+.   |.|.+.|.|+|+++.....                 ..|+..      .+.
T Consensus         6 ~~v~~~~~~-~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~   84 (268)
T 3mj6_A            6 PGLTVSSPQ-LRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG   84 (268)
T ss_dssp             ------CCE-EEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred             cccccCCCc-eEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence            345555556 9999999999999998   8888999999963321111                 133333      237


Q ss_pred             EEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeC---CCccceEEEE
Q psy8771         159 VLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY---PSETLLYYVI  233 (904)
Q Consensus       159 ~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~---~~~~~~~y~v  233 (904)
                      +|.|.++  +|+|.|+|.|.|..+.......+.+.+       .|..|..+.+.  ....++|.+..   .+.+...  +
T Consensus        85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V-------~~~~p~~~~v~--~G~~v~L~C~~~~~~~~p~~~--v  153 (268)
T 3mj6_A           85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWV-------LPEEPRDLRVR--VGDTTQMRCSIQSTEEKRVTK--V  153 (268)
T ss_dssp             CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEE-------ECCCCSEEEEE--TTCCEEECCBCEESSSSCCCE--E
T ss_pred             EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEE-------eccCCCccccc--cCCcEEEEEEecCCCCCCccc--e
Confidence            8999999  699999999999776654444444441       13344444433  23445555554   2222222  2


Q ss_pred             EEEeCCCC---------------C-----------CeEEe--ecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         234 QYKPKAAN---------------T-----------PYSEI--SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       234 ~~~~~~~~---------------~-----------~~~~~--~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      .|...++.               .           .....  .......+.|.++...+.+.|+|.|.|..|..
T Consensus       154 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~  227 (268)
T 3mj6_A          154 NWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLES  227 (268)
T ss_dssp             EEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred             EEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceE
Confidence            22221000               0           00000  01234689999999999999999999977754

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}

Probab=99.17  E-value=6.3e-11  Score=99.99  Aligned_cols=95  Identities=14%  Similarity=0.099  Sum_probs=75.8

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc--eEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH--HRRIGLVETYSLTGLYPNTLYYIWLAAQSP  697 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~  697 (904)
                      .|.+|..+.+. .+.+++.|+|.+..+++.++.+|.|+|+..+...+.  ....+...+++|.+|+|++.|+|+|.|.|.
T Consensus         8 ~P~pP~~~~~~-~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~N~   86 (114)
T 2kbg_A            8 EPSPPSIHGQP-SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANR   86 (114)
T ss_dssp             CCCSCCEECCB-CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEECT
T ss_pred             CccCCcccccc-cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEEeC
Confidence            35566655544 789999999998887888999999999998655553  223455678999999999999999999999


Q ss_pred             CCCCCCCCCeeEEecCCCC
Q psy8771         698 RGEGATTPPIPVRTKQYVP  716 (904)
Q Consensus       698 ~G~~~~s~~~~~~t~~~~p  716 (904)
                      .|.|.+|. ..++|...+|
T Consensus        87 ~G~s~pS~-~~~~T~~~~~  104 (114)
T 2kbg_A           87 LGYSEPTV-YEFSMPPKPN  104 (114)
T ss_dssp             TSCEEEEE-EEECCCCCCS
T ss_pred             CcCcCCcC-CEEEcCCCCc
Confidence            99998875 6677765543

>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}

Probab=99.17  E-value=1.3e-09  Score=114.64  Aligned_cols=166  Identities=11%  Similarity=0.106  Sum_probs=97.9

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccC---------CCCcee---------ecceEEEEeee
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELT---------PDDKLP---------VGRNVLTLDRV  165 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~---------~~~~~~---------~~~~~l~i~~l  165 (904)
                      ..|...|.+ +.+.+|+++.|.|.+.|. |.+.|+|+|+ +....         ...|+.         .....|.|.++
T Consensus         4 ~~v~~~p~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~-~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v   81 (327)
T 2wng_A            4 LQVIQPDKS-VSVAAGESAILHCTVTSLIPVGPIQWFRG-AGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNI   81 (327)
T ss_dssp             CCEECCCSE-EEEETTSCEEECCEESCCCSCCCEEEEES-CSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSC
T ss_pred             eEEEcCCCc-eEEecCCcEEEEEEccCcCCCceEEEEEC-CCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccC
Confidence            346677777 999999999999999998 9999999998 43221         112444         23557999999


Q ss_pred             --cCCeEEEEEEEecCcce-----EEEEEEEEEeecCCCCCCCCCCcce--EEEeecCCeEEEEEeCCCccceEEEEEEE
Q psy8771         166 --TESENYTCIAASVLGVI-----ETSTIVKVQCKYAPLLTLPVAPLDV--KISEVTATSVRLDWTYPSETLLYYVIQYK  236 (904)
Q Consensus       166 --~d~g~Y~c~a~n~~g~~-----~~~~~l~v~~~~~~~~~~P~~p~~l--~~~~~~~~sv~l~W~~~~~~~~~y~v~~~  236 (904)
                        +|+|.|+|.|.|..+..     ...+.|.|.       ..|.+|.-.  .........++|.+...+.+.....+.|.
T Consensus        82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~-------~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~  154 (327)
T 2wng_A           82 TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVR-------AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWF  154 (327)
T ss_dssp             CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEE-------BCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEE
T ss_pred             ccccCeEEEEEeecCCCcceeEeecCcEEEEEE-------ecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEE
Confidence              69999999999987641     234677777       333332110  00112234455555433211111123343


Q ss_pred             eCCCCCCeE--Ee-ec------ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         237 PKAANTPYS--EI-SG------IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       237 ~~~~~~~~~--~~-~~------~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+......  .. ..      .....+.|......+.+.|+|.|.|..|..
T Consensus       155 k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~  206 (327)
T 2wng_A          155 KNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQG  206 (327)
T ss_dssp             ETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCS
T ss_pred             ECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCC
Confidence            322111000  00 00      111346666666666799999999988763

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.17  E-value=9.2e-11  Score=100.45  Aligned_cols=97  Identities=16%  Similarity=0.235  Sum_probs=77.5

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCC-ceeeEEEEEEeCCccccceEE--ecccceEEEeCCCCCcEEEEEEEEEc
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKAKHHRR--IGLVETYSLTGLYPNTLYYIWLAAQS  696 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~l~~L~p~t~Y~v~V~a~~  696 (904)
                      .+.+|.+|++..++.++++|+|.++...++ .+.+|.|+|+..+...+....  ......+++.+|.+++.|.|+|+|+|
T Consensus         8 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n   87 (111)
T 1x5y_A            8 PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVN   87 (111)
T ss_dssp             CCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEEEE
T ss_pred             CCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEEEEc
Confidence            467899999999999999999999876555 599999999987665553222  13467899999999999999999999


Q ss_pred             CCCCCCCCCCe-eEEecCCCC
Q psy8771         697 PRGEGATTPPI-PVRTKQYVP  716 (904)
Q Consensus       697 ~~G~~~~s~~~-~~~t~~~~p  716 (904)
                      ..|.|.+|... .+++.+.+|
T Consensus        88 ~~G~s~~S~~~~~v~~~~~~P  108 (111)
T 1x5y_A           88 IAGRSEPATLLQPVTIRESGP  108 (111)
T ss_dssp             TTEECCCCCCSSCBCCCCCCC
T ss_pred             CCcCCCCccCCCCEEecCCCC
Confidence            99999888765 345554443

>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C

Probab=99.17  E-value=2.8e-10  Score=112.88  Aligned_cols=162  Identities=14%  Similarity=0.199  Sum_probs=105.7

Q ss_pred             CCCCCcEEEeccCCceEEEEeCCCCC---------------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCC
Q psy8771          35 TAPRDVQVRPLSSSTMVIQWDEPETP---------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADP   99 (904)
Q Consensus        35 ~~p~~l~~~~~~~~s~~v~W~~~~~~---------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~   99 (904)
                      +....|.|...+.+...|.|.+....               ++.+....+...+.....|...+..........+.+...
T Consensus        34 G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~  113 (231)
T 3ojm_B           34 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVER  113 (231)
T ss_dssp             TSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred             CCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcC
Confidence            36667777776777889999765211               112333334444555555555544333444455555432


Q ss_pred             CCCCCCeEEcC-CCCceEEecCCCeEEEEEEccCCCCeEEEee----CCccccCCCCc-ee----------ecceEEEEe
Q psy8771         100 VRRVPPQFSIP-PPALLEVMLDSPLNLSCVAVGSPMPFVKWRK----GQNIELTPDDK-LP----------VGRNVLTLD  163 (904)
Q Consensus       100 ~~~~~P~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k----~~~~~~~~~~~-~~----------~~~~~l~i~  163 (904)
                      . ..+|.+... +.. ..+.+|+.+.|.|.+.|.|.|.|.|++    + +..+..... ..          ...+.|.|.
T Consensus       114 ~-~~~p~~~~~~~~~-~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~  190 (231)
T 3ojm_B          114 S-RHRPILQAGLPAN-ASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKN-GSKYGPDGLPYLKVLKHSGINSSNAEVLALF  190 (231)
T ss_dssp             C-CCCCEECTTCSCC-EEEETTCCEEEECCEECSSCCEEEEEEECCBT-TBSBCTTSCBCEEEEEECSTTCSCTTEEEEC
T ss_pred             C-CCCCceeeccCCc-eEEEeCCcEEEEEEEecCCCCEEEEEECCCCC-CccccCCCcceEeEecccccccCCccEEEEe
Confidence            2 234445443 445 899999999999999999999999999    6 555533321 11          134579999


Q ss_pred             ee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcc
Q psy8771         164 RV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLD  206 (904)
Q Consensus       164 ~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~  206 (904)
                      ++  +|+|.|+|.|.|..|..+..+.|.|.       ..|.+|..
T Consensus       191 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-------~~p~~p~~  228 (231)
T 3ojm_B          191 NVTEADAGEYICKVSNYIGQANQSAWLTVL-------PKQQAPGR  228 (231)
T ss_dssp             SCCGGGCEEEEEEEEETTEEEEEEEEEEEE-------CCC-----
T ss_pred             cCCHHHCeEEEEEEEeccceEeeEEEEEEe-------cCCCCCcc
Confidence            98  69999999999999999999999999       67766653

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A

Probab=99.17  E-value=1.3e-10  Score=97.76  Aligned_cols=92  Identities=16%  Similarity=0.307  Sum_probs=72.9

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      .+|.+|.+..++.+++.|+|++|.     +.+.+|.|+|+....... .....+. ..++++|.+|+|++.|.|+|+|.+
T Consensus         4 ~~P~~l~v~~~t~~sv~lsW~~p~-----~~i~~Y~v~y~~~~~~~~-~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~   77 (104)
T 2rb8_A            4 DAPSQIEVKDVTDTTALITWMPPS-----QPVDGFELTYGIKDVPGD-RTTIDLTEDENQYSIGNLKPDTEYEVSLISRR   77 (104)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEETTCTTC-CEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCCccEEEEecCCeEEEEEcCCC-----CccceEEEEEEECcCCCc-eEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence            368999999999999999999883     668999999988653222 2334455 889999999999999999999999


Q ss_pred             CCCCCCCCCcEEeecCCCCC
Q psy8771         797 SIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       797 ~~g~g~~s~~~~~~t~~~~P  816 (904)
                      ..|.|..+. ..++|.+..|
T Consensus        78 ~~g~s~p~~-~~~~T~~~~~   96 (104)
T 2rb8_A           78 GDMSSNPAK-ETFTTGLAAA   96 (104)
T ss_dssp             TTEECCCEE-EEEECCC---
T ss_pred             CCccCCCEE-EEEECCCCcc
Confidence            999887654 6688877665

>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*

Probab=99.17  E-value=1.1e-10  Score=124.17  Aligned_cols=158  Identities=12%  Similarity=0.110  Sum_probs=103.4

Q ss_pred             eEEecCCCeEEEEEEccCCC-----------CeEEEeeCCc-----cccC---CCCceeecceEEEEeee--cCCeEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM-----------PFVKWRKGQN-----IELT---PDDKLPVGRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~-----------p~i~W~k~~~-----~~~~---~~~~~~~~~~~l~i~~l--~d~g~Y~c  173 (904)
                      +.+.+|+++.|.|.+.|.|.           +.|.|+|++.     ..+.   ...++...++.|.|.++  +|+|.|+|
T Consensus        17 v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C   96 (349)
T 4dep_C           17 IQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTC   96 (349)
T ss_dssp             CEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEEEE
T ss_pred             EEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEEEE
Confidence            99999999999999998775           9999999832     1122   23455567789999998  79999999


Q ss_pred             EEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeC-----CCccceEEEEEEEeCCCCCCeEEee
Q psy8771         174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY-----PSETLLYYVIQYKPKAANTPYSEIS  248 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~-----~~~~~~~y~v~~~~~~~~~~~~~~~  248 (904)
                      .|.|..|.....+.|.|.............|..  ........+.|.+..     .+.+.  ..+.|...+.........
T Consensus        97 ~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~--~~~~~g~~~~l~C~~~~~~~~g~p~--~~v~W~k~~~~l~~~~~~  172 (349)
T 4dep_C           97 MLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVH--KLYIEYGIQRITCPNVDGYFPSSVK--PTITWYMGCYKIQNFNNV  172 (349)
T ss_dssp             EEECSSCEEEEEEEEEEECCCTTSCCSCCCCEE--EEETTCSEEEEECCSCTTSSCTTSC--CEEEEEETTEECCSCSSE
T ss_pred             EEecCCceEEEEEEEEEecCCcccCcccccCcc--eeeecCccEEEEcCCCcccccCCCC--ceEEEeeCCEECCCccce
Confidence            999999998888889888211100000011222  223345668888863     11222  234444332111000000


Q ss_pred             cceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771         249 GIITTYYTVRNLSPYTEYEFYIIAVNNL  276 (904)
Q Consensus       249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~  276 (904)
                      ......+.|.++...+.+.|+|.|.|..
T Consensus       173 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~  200 (349)
T 4dep_C          173 IPEGMNLSFLIALISNNGNYTCVVTYPE  200 (349)
T ss_dssp             EEETTEEEEESCCGGGCEEEEEEEEEEE
T ss_pred             eecCCEEEEeeeeecCCcEEEEEEEEee
Confidence            1122679999999999999999999986

>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}

Probab=99.17  E-value=8.8e-11  Score=95.46  Aligned_cols=82  Identities=17%  Similarity=0.302  Sum_probs=62.5

Q ss_pred             CCCeEEcCCCCc-eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         103 VPPQFSIPPPAL-LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       103 ~~P~~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      .||.|..++.+. +.+.+|+++.|+|.+.| |.|.|+|+|| |..+..+.++.+    ....|.|.++  +|+|.|+|.|
T Consensus         3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~-g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a   80 (91)
T 2lvc_A            3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKD-GQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVA   80 (91)
T ss_dssp             CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEET-TSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEEC
T ss_pred             CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEEC-CEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEE
Confidence            577777777651 34468999999999966 8899999999 888877776654    2247999999  6999999998


Q ss_pred             EecCcceEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKV  190 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v  190 (904)
                      .|    .+.++.|.|
T Consensus        81 ~n----~~~~~~ltV   91 (91)
T 2lvc_A           81 GD----ECAYFTVTI   91 (91)
T ss_dssp             SS----CEEEEEEEC
T ss_pred             cc----eEEEEEEEC
Confidence            65    345555543

>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}

Probab=99.17  E-value=1.4e-10  Score=111.27  Aligned_cols=149  Identities=21%  Similarity=0.365  Sum_probs=105.0

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC------------CCc-eecccccccccceEEEEeeeccCC-eeeeeeeeccCCCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP------------NGQ-ITHPPTRAARSHARLAAQSVLRRG-RLAHAVRQVADPVR  101 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~------------~g~-i~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~v~~~~~  101 (904)
                      ....|.|...+.+...+.|.+....            +|. ++...+...+.....|...+.... ......+.+     
T Consensus        23 ~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v-----   97 (192)
T 2iep_A           23 EVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQV-----   97 (192)
T ss_dssp             SCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEE-----
T ss_pred             CcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEE-----
Confidence            4555666665667789999875311            111 333333444444445555443333 233344443     


Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEec
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      ..+|.+...+.. ..+..|+.+.|.|.+.|.|.+.|.|+++ +..+....++.. .++.|.|.++  +|+|.|+|.|.|.
T Consensus        98 ~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~  175 (192)
T 2iep_A           98 KMKPKITRPPIN-VKIIEGLKAVLPCTTMGNPKPSVSWIKG-DSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNS  175 (192)
T ss_dssp             EEEEEEEECCCC-EEEETTSCEEECCEEEEESCCEEEEEET-TEECCCCSSEEECTTSCEEESSCCGGGCEEEEEEEEET
T ss_pred             EeCCccccCCcc-eEEeCCCcEEEEEEEeccCCceEEEEeC-CEEccCCCcEEEecCCcEEEecCChhhCEEEEEEEEcC
Confidence            456888888877 8999999999999999999999999999 777766666554 6678999999  6999999999999


Q ss_pred             CcceE-EEEEEEEE
Q psy8771         179 LGVIE-TSTIVKVQ  191 (904)
Q Consensus       179 ~g~~~-~~~~l~v~  191 (904)
                      .|... ....|.|.
T Consensus       176 ~g~~~s~~~~l~V~  189 (192)
T 2iep_A          176 LGTAYSKLVKLEVE  189 (192)
T ss_dssp             TEEEECCCEEEEEE
T ss_pred             CCcEEEEEEEEEEE
Confidence            99874 46777776

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.17  E-value=2e-10  Score=98.44  Aligned_cols=72  Identities=17%  Similarity=0.195  Sum_probs=58.9

Q ss_pred             CCCceeeEEEEEEeCCc----cccce--EEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCC-CCC
Q psy8771         647 SGENIISYELYWNDTYA----KAKHH--RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYV-PGA  718 (904)
Q Consensus       647 ~~~~~~~y~v~~~~~~~----~~~~~--~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~-p~~  718 (904)
                      .++.+.+|.|.|+..+.    ..+..  .......++.|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+.+ |..
T Consensus        41 ~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v~Ps~  119 (120)
T 1ujt_A           41 QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESGPSS  119 (120)
T ss_dssp             CCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSCCCCC
T ss_pred             CCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCCCCCC
Confidence            56778999999998765    22322  22334679999999999999999999999999999999999999998 763

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.17  E-value=9.6e-11  Score=99.60  Aligned_cols=94  Identities=27%  Similarity=0.358  Sum_probs=76.2

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      .|+.+|..+.+..++.+++.|+|.+|...+| .+.+|.|+++..+.   ..|.....  ...+.+.+.+|.+++.|.|+|
T Consensus         9 ~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~---~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV   85 (112)
T 1bpv_A            9 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPN---GRWLKANFSNILENEFTVSGLTEDAAYEFRV   85 (112)
T ss_dssp             CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTS---CCCEECCCSCCCSSEEEECSCCSSCCEEEEE
T ss_pred             CCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCC---CceEEeecccCccCEEEECCCCCCCEEEEEE
Confidence            4567888888999999999999998765555 69999999998753   34655432  456789999999999999999


Q ss_pred             EEEeCCCC-CCCCCcEEEecC
Q psy8771         557 QAFTSVGP-GPLSAPVLVKTQ  576 (904)
Q Consensus       557 ~a~~~~g~-~~~S~~~~~~t~  576 (904)
                      +|+|..|. |.+|......+.
T Consensus        86 ~A~N~~G~~s~~S~~~~~~t~  106 (112)
T 1bpv_A           86 IAKNAAGAISPPSEPSDAITC  106 (112)
T ss_dssp             EEECTTSCEEEEEEEEEEECS
T ss_pred             EEEECCCCCCCCCCCCCCEEe
Confidence            99999997 988877766653

>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A

Probab=99.16  E-value=6.9e-11  Score=99.21  Aligned_cols=87  Identities=24%  Similarity=0.481  Sum_probs=69.5

Q ss_pred             CCCeEEcCCC---CceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc-----eeecceEEEEeee--cCCeEEE
Q psy8771         103 VPPQFSIPPP---ALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-----LPVGRNVLTLDRV--TESENYT  172 (904)
Q Consensus       103 ~~P~~~~~~~---~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~-----~~~~~~~l~i~~l--~d~g~Y~  172 (904)
                      .||.|...|.   ..+.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....+     ...+...|.|.++  +|+|.|+
T Consensus         3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~   81 (100)
T 3caf_A            3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKN-GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT   81 (100)
T ss_dssp             EEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEET-TEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred             CCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEEC-CEEcccccccccEEEecCeEEEEEccCCcCCCEEEE
Confidence            4677775552   338889999999999999999999999999 665544322     2224568999999  6999999


Q ss_pred             EEEEecCcceEEEEEEEE
Q psy8771         173 CIAASVLGVIETSTIVKV  190 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v  190 (904)
                      |.|.|..|.....+.|.|
T Consensus        82 C~a~N~~g~~~~~~~l~V   99 (100)
T 3caf_A           82 CVVENEYGSINHTYHLDV   99 (100)
T ss_dssp             EEEEETTEEEEEEEEEEE
T ss_pred             EEEEeCCCEEEEEEEEEE
Confidence            999999999888887776

>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*

Probab=99.16  E-value=9.1e-11  Score=114.56  Aligned_cols=164  Identities=10%  Similarity=0.039  Sum_probs=93.6

Q ss_pred             CCCceEEecC--CCeEEEEEEccCCCCeEEEeeC--CccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceE
Q psy8771         111 PPALLEVMLD--SPLNLSCVAVGSPMPFVKWRKG--QNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIE  183 (904)
Q Consensus       111 ~~~~~~~~~g--~~~~l~C~~~g~p~p~i~W~k~--~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~  183 (904)
                      |.. +.+.+|  +++.|.|.+.| |.+.|+|++.  ++..+..+.++.. ..+.|.|.++  +|+|.|+|.|.|..+...
T Consensus        14 p~~-v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~   91 (213)
T 2x1w_L           14 HGV-VYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQ   91 (213)
T ss_dssp             CEE-EEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred             ceE-EEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEE
Confidence            345 889999  99999999987 7799999873  3666665555543 4578999999  699999999998544433


Q ss_pred             EE-EEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe--E---Eee-------cc
Q psy8771         184 TS-TIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY--S---EIS-------GI  250 (904)
Q Consensus       184 ~~-~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~--~---~~~-------~~  250 (904)
                      .. ..|.|.....+.... .++..+.+.  ....++|.+...+.+...+.+.|...+.....  .   ...       ..
T Consensus        92 s~~~~l~v~~~~~p~~~~-~~~~~~~v~--~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~  168 (213)
T 2x1w_L           92 SIMYIVVVVGYRIYDVVL-SPSHGIELS--VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK  168 (213)
T ss_dssp             CCCEEEEECBCCEEEEEE-ESCSCEEEE--TTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEE
T ss_pred             EEEEEEEEeCCcccceEE-cCCCCeEEc--CCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCcccee
Confidence            22 455553100000000 112222222  22334444433211111122333332221100  0   000       11


Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ....|.|.+++..+.+.|+|.|.|..|..
T Consensus       169 ~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~  197 (213)
T 2x1w_L          169 FLSTLTIDGVTRSDQGLYTCAASSGLMTK  197 (213)
T ss_dssp             EEEEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred             eeEEEEECCCCcccCEEEEEEEecCCCcE
Confidence            23569999999999999999999998865

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.16  E-value=1.9e-10  Score=96.83  Aligned_cols=94  Identities=21%  Similarity=0.288  Sum_probs=75.4

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .+.+|.+|++.+++.+++.|+|.++.   +.+.+|.|+|+..++...........++++|.+|+|++.|.|+|+|+|..|
T Consensus         7 ~p~~P~~l~v~~~~~~sv~lsW~~p~---~~i~~Y~i~y~~~~~~~~~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~~g   83 (105)
T 2cum_A            7 GLEAPRDLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQS   83 (105)
T ss_dssp             TCCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEECTTSCEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBTTB
T ss_pred             CCCCCCceEEEeccCCEEEEEEcCCC---CccceEEEEEEeCCCceEEEEECCCccEEEECCCCCCCEEEEEEEEEeCCc
Confidence            57899999999999999999999864   479999999997654322223344668999999999999999999999998


Q ss_pred             CCCCCCCeeEEecCCCCC
Q psy8771         700 EGATTPPIPVRTKQYVPG  717 (904)
Q Consensus       700 ~~~~s~~~~~~t~~~~p~  717 (904)
                      .+.+. ...++|......
T Consensus        84 ~s~~~-~~~~~T~~~~~~  100 (105)
T 2cum_A           84 LLPPV-STSFTTGGLRIS  100 (105)
T ss_dssp             CCCCE-EEEEECCCSCCS
T ss_pred             ccCCE-EEEEEeCCcCCC
Confidence            88764 467777665443

>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4

Probab=99.16  E-value=1.2e-10  Score=98.14  Aligned_cols=82  Identities=15%  Similarity=0.285  Sum_probs=67.2

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC--ceeec----ceEEEEeee--cCCeEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD--KLPVG----RNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--~~~~~----~~~l~i~~l--~d~g~Y~c~  174 (904)
                      .|+.|...+.+ +.+.+|++++|.|.+.| |.+.|.|+|+ +..+....  ++.+.    ...|.|.++  +|+|.|+|.
T Consensus         6 ~p~~~~~~~~~-~~v~~G~~v~l~C~~~~-~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~   82 (103)
T 1x44_A            6 SGIMVTKQLED-TTAYCGERVELECEVSE-DDANVKWFKN-GEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVM   82 (103)
T ss_dssp             SSCCCSBCCCC-EEEETTEEEEEEEECSS-SSCCCEEEET-TEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEE
T ss_pred             CCceeeccCCC-EEEECCCCEEEEEEecC-CCCeEEEEEC-CEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEE
Confidence            34457888888 99999999999999988 7799999999 77776655  44542    268999999  699999999


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.|    ....+.|.|.
T Consensus        83 a~n----~~~~~~l~V~   95 (103)
T 1x44_A           83 TTG----GQSSAKLSVD   95 (103)
T ss_dssp             ETT----EEEEEEEEEE
T ss_pred             ECC----CcEEEEEEEe
Confidence            987    5777888888

>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*

Probab=99.16  E-value=1.8e-10  Score=108.36  Aligned_cols=155  Identities=13%  Similarity=0.136  Sum_probs=104.6

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEec
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      ..+|.|...|.. +.+.+|+.++|.|.+.|.|.+. +.|+|+ +..+.      ...+.|.|.++  +|+|.|+|.+.|.
T Consensus         5 ~~~p~i~~~p~~-~~v~~G~~v~L~C~~~~~p~~~~~~W~~~-~~~~~------~~~~~L~i~~~~~~d~G~Y~C~~~n~   76 (175)
T 1fnl_A            5 LPKAVVFLEPQW-YSVLEKDSVTLKCQGAYSPEDNSTQWFHN-ESLIS------SQASSYFIDAATVNDSGEYRCQTNLS   76 (175)
T ss_dssp             CCCCEEEEESCC-SEEETTCCEEEEEECCCBTTBCCCEEEET-TEEEE------SSCSEEEESSCCGGGCEEEEEECSSS
T ss_pred             CCCCEEEEcCCc-eeeeCCCcEEEEeeCCCCCCCcceEEEEC-CEEcc------CCceEEEEeCCCcccCEEEEEEeeCC
Confidence            456888888887 8999999999999999999876 789999 55443      25678999999  6999999999985


Q ss_pred             CcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEc
Q psy8771         179 LGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR  258 (904)
Q Consensus       179 ~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~  258 (904)
                      .+  +....|.|.  ..+...  .++ ...+  .....++|.+...+.+.. ..+.|...+.  ...  .......+.|.
T Consensus        77 ~~--s~~~~l~V~--~~~~~~--~~~-~~~~--~~g~~~~l~C~~~~~~~~-~~~~W~k~g~--~~~--~~~~~~~L~i~  142 (175)
T 1fnl_A           77 TL--SDPVQLEVH--IGWLLL--QAP-RWVF--KEEDPIHLRCHSWKNTAL-HKVTYLQNGK--DRK--YFHHNSDFHIP  142 (175)
T ss_dssp             CC--CCCEEEEEE--CSSEEE--ECS-CSEE--ETTCCEEEEEEECTTCCC-EEEEEEETTE--EEE--EEEECCCEEES
T ss_pred             cc--cccEEEEEe--CCCcee--eCC-Ccee--cCCCCEEEEEEcCCCCCc-eEEEEEECCe--Ecc--CCCCCCEEEEc
Confidence            54  445666666  111100  111 1222  234556677765432221 3345544321  111  12234779999


Q ss_pred             CCCCCCeEEEEEEEEcCCCC
Q psy8771         259 NLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       259 ~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      ++...+.+.|+|.|.|..|.
T Consensus       143 ~v~~~d~G~Y~C~a~n~~~~  162 (175)
T 1fnl_A          143 KATLKDSGSYFCRGLVGSKN  162 (175)
T ss_dssp             SCCGGGCEEEEEEEEETTEE
T ss_pred             ccChhhCeEEEEEEEcCCCC
Confidence            99999999999999997553

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.16  E-value=1.4e-10  Score=97.98  Aligned_cols=97  Identities=23%  Similarity=0.259  Sum_probs=74.0

Q ss_pred             CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC-------CccEEEEec-CcceEEecCCCCC
Q psy8771         714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD-------SEASIVTLK-NQTSFVLDELKKW  785 (904)
Q Consensus       714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-------~~~~~~~~~-~~~~~~i~~L~p~  785 (904)
                      ..|. +|.+|++..++.++|.|+|++|.     |.+.+|.|+|....+..       .......+. ..++++|.+|.|+
T Consensus         7 ~~pp-~p~~L~v~~~T~~Si~LsW~~p~-----g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~Pg   80 (112)
T 2cui_A            7 GSRP-RLSQLSVTDVTTSSLRLNWEAPP-----GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSG   80 (112)
T ss_dssp             CCCC-CCCCCEEESCCSSCEEEECCCCT-----TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTT
T ss_pred             CCCC-CCCceEEEeecCCeEEEEECCCC-----CCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCC
Confidence            3444 57999999999999999999873     66899999999765421       123455666 8889999999999


Q ss_pred             ceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771         786 TEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       786 t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~  817 (904)
                      +.|.|+|+|.+..|.+... ...++|..++++
T Consensus        81 T~Y~~~V~A~~~~~~s~p~-~~~~~T~~~~~~  111 (112)
T 2cui_A           81 TLYSLTLYGLRGPHKADSI-QGTARTLSGPSS  111 (112)
T ss_dssp             CEEEEEEEEECSSSEEEEE-EEEEECCCCSCC
T ss_pred             CEEEEEEEEEECCcccCCE-EEEEEECCCCCC
Confidence            9999999999876655432 355777666543

>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}

Probab=99.15  E-value=8e-11  Score=122.75  Aligned_cols=146  Identities=15%  Similarity=0.142  Sum_probs=96.7

Q ss_pred             CcEEEe-ccCCceEEEEeCCCCC---------CCc------eecccccccccceEEEEeeeccCCee--eeeeeeccCCC
Q psy8771          39 DVQVRP-LSSSTMVIQWDEPETP---------NGQ------ITHPPTRAARSHARLAAQSVLRRGRL--AHAVRQVADPV  100 (904)
Q Consensus        39 ~l~~~~-~~~~s~~v~W~~~~~~---------~g~------i~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~v~~~~  100 (904)
                      .|.|.. -+.+.+.|+|.+....         ++.      +.....+..+.....|...+......  ..+.+.     
T Consensus       133 ~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~-----  207 (308)
T 4fom_A          133 AAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILD-----  207 (308)
T ss_dssp             EEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC-----
T ss_pred             EEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEE-----
Confidence            344432 3567899999876322         111      11122233344444555544332222  223333     


Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      +..+|.+...+.+...+..|+.++|.|.+.|.|.| .|.|+|+ +..+..... ..++..|.|.++  +|+|.|+|.|.|
T Consensus       208 V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~-~~~~~~~~~-~~~~~~l~i~~v~~~d~G~Y~C~A~N  285 (308)
T 4fom_A          208 IQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRL-DGQWPDGLL-ASDNTLHFVHPLTFNYSGVYICKVTN  285 (308)
T ss_dssp             CCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBS-SSCCCSSCB-CSTTEEECCSCCCSCCCSEEEEEEEE
T ss_pred             EecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEEC-CeECCCcEE-EcCCeEEEECCCChhhCEEEEEEEEe
Confidence            35678877666655788889999999999999998 6999999 656654322 224556677887  699999999999


Q ss_pred             cCcceEEEEEEEEE
Q psy8771         178 VLGVIETSTIVKVQ  191 (904)
Q Consensus       178 ~~g~~~~~~~l~v~  191 (904)
                      ..|..+.++.|.|.
T Consensus       286 ~~G~~~~~~~l~V~  299 (308)
T 4fom_A          286 SLGQRSDQKVIYIS  299 (308)
T ss_dssp             TTEEEEEEEECCEE
T ss_pred             CCCcEEEEEEEEEE
Confidence            99999999999988

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}

Probab=99.15  E-value=7.2e-11  Score=123.41  Aligned_cols=237  Identities=10%  Similarity=0.024  Sum_probs=128.8

Q ss_pred             CCCCcEEEec-cCCceEEEEeCCCCC---C--------C---ceecccccccccceEEEEeeeccCCeeeeeeeeccCCC
Q psy8771          36 APRDVQVRPL-SSSTMVIQWDEPETP---N--------G---QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPV  100 (904)
Q Consensus        36 ~p~~l~~~~~-~~~s~~v~W~~~~~~---~--------g---~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~  100 (904)
                      ....|.|.+. +.+...|.|.+....   +        |   .++.......|...+.|...+.. |......+.+....
T Consensus        17 ~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~-g~~~s~~l~v~~~~   95 (312)
T 2y23_A           17 GVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTD-GIASSYLIDEEELK   95 (312)
T ss_dssp             CCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSC-CCCEEEEECHHHHH
T ss_pred             CeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCC-CcEEEEEEEEeeee
Confidence            3444555543 467889999775321   1        1   12222333344444445444333 33333334432110


Q ss_pred             C-------CCCCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeec------ceEEEEeee-
Q psy8771         101 R-------RVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVG------RNVLTLDRV-  165 (904)
Q Consensus       101 ~-------~~~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~------~~~l~i~~l-  165 (904)
                      .       ..+|.+...+.....+.+|+.+.|.|.+. |.|.+.|.|+|+ +..+....++.+.      ...|.|.++ 
T Consensus        96 ~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-~~~i~~~~~~~~~~~~~~~~~~L~i~~~~  174 (312)
T 2y23_A           96 RLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFN-EKEIFEGPKYKMHIDRNTGIIEMFMEKLQ  174 (312)
T ss_dssp             HHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEET-TEEECSSSSCEEEEETTTTEEEEEESCCC
T ss_pred             eeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEEC-CEECeeCCcEEEEEccCCCEEEEEEccCC
Confidence            0       01444443333128899999999999999 899999999999 7777666655442      224999999 


Q ss_pred             -cCCeEEEEEEEecCcceEEEEEEEEEeec-------C----CCCCCCCCCc---ceEEEeecCCeEEEEEeCCCccceE
Q psy8771         166 -TESENYTCIAASVLGVIETSTIVKVQCKY-------A----PLLTLPVAPL---DVKISEVTATSVRLDWTYPSETLLY  230 (904)
Q Consensus       166 -~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~-------~----~~~~~P~~p~---~l~~~~~~~~sv~l~W~~~~~~~~~  230 (904)
                       +|+|.|+|.|.|..+..  ...+.+....       .    +......+|.   .+.........+.|.+...+.+.. 
T Consensus       175 ~~d~G~Y~C~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~-  251 (312)
T 2y23_A          175 DEDEGTYTFQLQDGKATN--HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKE-  251 (312)
T ss_dssp             GGGCEEEEEEEESSSCEE--EEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSS-
T ss_pred             cccCEeEEEEEEeCCceE--EEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCC-
Confidence             69999999998754443  3333331000       0    0000001121   111222334555555554422211 


Q ss_pred             EEEEEEeCCCC----CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         231 YVIQYKPKAAN----TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       231 y~v~~~~~~~~----~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|...+..    ..+. .. .....+.|.++...+.+.|+|.|.|..|..
T Consensus       252 ~~v~W~~~g~~~~~~~~~~-~~-~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~  302 (312)
T 2y23_A          252 THIVWYKDEREISVDEKHD-FK-DGICTLLITEFSKKDAGIYEVILKDDRGKD  302 (312)
T ss_dssp             CEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCE
T ss_pred             CEEEEeeCCEECCCCCcEE-EE-CCEEEEEECcCCHHHCEEEEEEEEcCCCce
Confidence            02334332111    0111 11 223689999999999999999999999864

>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4

Probab=99.15  E-value=2e-10  Score=127.09  Aligned_cols=166  Identities=11%  Similarity=0.031  Sum_probs=99.2

Q ss_pred             CCeEE-cCCCCceEEecCCCeEEEEEEccCCCC---eEEEeeCCccccCCCCcee-ecceEEEEeee--cCCeEEEEEEE
Q psy8771         104 PPQFS-IPPPALLEVMLDSPLNLSCVAVGSPMP---FVKWRKGQNIELTPDDKLP-VGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       104 ~P~~~-~~~~~~~~~~~g~~~~l~C~~~g~p~p---~i~W~k~~~~~~~~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      +|.+. ..+.+ ..+.+|+.+.|.|.+.|.|.+   .|+|+|+ +..+....+.. ..++.|.|.++  +|+|.|+|.|.
T Consensus        85 ~P~~~~~~~~~-~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~-g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~  162 (450)
T 1z7z_I           85 TPERVELAPLP-SWQPVGKNLTLRCQVEGGAPRANLTVVLLRG-EKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTE  162 (450)
T ss_dssp             CCSEEEECCCC-SEECTTSEEEEEEEEECCBCGGGEEEEEEET-TEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEE
T ss_pred             CCCcceecCCC-ceEeeCCeEEEEEEecCCCCCcCcEEEEeeC-CEEeecccccccccceEEEEEeeccccCceEEEEEE
Confidence            45544 56666 889999999999999999998   9999999 65554322111 23468999888  58999999999


Q ss_pred             ecCcceE--------EEEEEEEEeecCCCCCC-CCCCcc---eEEEeecCCeEEEEEeCCCc-cceEEEEEEEeCCCCCC
Q psy8771         177 SVLGVIE--------TSTIVKVQCKYAPLLTL-PVAPLD---VKISEVTATSVRLDWTYPSE-TLLYYVIQYKPKAANTP  243 (904)
Q Consensus       177 n~~g~~~--------~~~~l~v~~~~~~~~~~-P~~p~~---l~~~~~~~~sv~l~W~~~~~-~~~~y~v~~~~~~~~~~  243 (904)
                      |..|...        ....|.|.       .. +.+|..   ..+  .....++|.+...+. +.....+.|...+....
T Consensus       163 n~~g~~~~~~~~~~s~~~~l~v~-------~~~~~~p~~~~~~~v--~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~  233 (450)
T 1z7z_I          163 LDLRPQGLELFENTSAPYQLQTF-------VLPATPPQLVSPRVL--EVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLN  233 (450)
T ss_dssp             EECGGGTSCEEEEECCCEECEEC-------CCCSSCCEEECCSEE--ETTSEEEEEEEEESCTTGGGCEEEEEETTEECC
T ss_pred             cccCCCCceEEeeccCccceeee-------ccCCCCCEecCceeE--EeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCC
Confidence            9987533        23344444       22 223332   222  234456666655433 32223455554432111


Q ss_pred             eEEeecceeceEE-EcCCCCCCeE--EEEEEEEcCCCCCC
Q psy8771         244 YSEISGIITTYYT-VRNLSPYTEY--EFYIIAVNNLGRGP  280 (904)
Q Consensus       244 ~~~~~~~~~~~~~-i~~L~p~~~Y--~~~v~a~n~~g~s~  280 (904)
                      ...........+. ..++.+.+.+  .|+|.|.|..|...
T Consensus       234 ~~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~  273 (450)
T 1z7z_I          234 PTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQE  273 (450)
T ss_dssp             CEEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEE
T ss_pred             ceEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEE
Confidence            1111111111111 1166788866  99999999987643

>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A

Probab=99.15  E-value=5.5e-10  Score=108.96  Aligned_cols=154  Identities=16%  Similarity=0.253  Sum_probs=104.0

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC--------------CCc-eeccccc-ccccceEEEEeeeccCCeeeeeeeeccCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP--------------NGQ-ITHPPTR-AARSHARLAAQSVLRRGRLAHAVRQVADP   99 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~--------------~g~-i~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~v~~~   99 (904)
                      ....|.|...+.+.+.|.|.+....              ++. ++..... ..+.....|...+........+.+.+...
T Consensus        22 ~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~  101 (212)
T 2yd6_A           22 GVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLRE  101 (212)
T ss_dssp             SCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECG
T ss_pred             CeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEecc
Confidence            5667777777777889999776211              111 2223332 34444455555544333334445555432


Q ss_pred             --CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC---Cceee----cceEEEEeee--cCC
Q psy8771         100 --VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD---DKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       100 --~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~---~~~~~----~~~~l~i~~l--~d~  168 (904)
                        ....+|.+...|.. ..+..|+.+.|.|.+.|.|.|.|.|+|+ +..+...   .++..    ..+.|.|.++  +|+
T Consensus       102 ~~~~~~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~v~W~~~-g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~  179 (212)
T 2yd6_A          102 DQIPRGFPTIDMGPQL-KVVERTRTATMLCAASGNPDPEITWFKD-FLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQ  179 (212)
T ss_dssp             GGCCTTCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEET-TEEC------CCEEEEEETTEEEEEECSCCGGGC
T ss_pred             CccCCCcceeecCCcc-eeEecCCCEEEEEEecCCCCCeEEEEEC-CccccCcCCCceEEEEecCCeEEEEEcCCCcccC
Confidence              12345888888887 8899999999999999999999999999 6666442   34432    2478999999  699


Q ss_pred             eEEEEEEEecCcceE-EEEEEEEE
Q psy8771         169 ENYTCIAASVLGVIE-TSTIVKVQ  191 (904)
Q Consensus       169 g~Y~c~a~n~~g~~~-~~~~l~v~  191 (904)
                      |.|+|.|.|..|... ..+.|.+.
T Consensus       180 G~Y~C~a~N~~G~~~s~~a~l~~~  203 (212)
T 2yd6_A          180 GKYECVATNSAGTRYSAPANLYVR  203 (212)
T ss_dssp             EEEEEEEEETTEEEECCCEEEEEE
T ss_pred             EEEEEEEECCCCccccccccEEEE
Confidence            999999999999864 55677776

>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.2e-10  Score=98.15  Aligned_cols=84  Identities=10%  Similarity=0.189  Sum_probs=69.8

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ..||.|...+.+ +.+.+|+.++|.|.+.|.|.+ .|.|+|+ |..+..+.|+.+.    ..+|.|.++  +|+|.|+|.
T Consensus         6 ~~p~~~~~~~~~-~~v~~G~~v~l~C~v~~~~~~~~v~W~k~-g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   83 (104)
T 2eny_A            6 SGHVGITKRLKT-MEVLEGESCSFECVLSHESASDPAMWTVG-GKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFS   83 (104)
T ss_dssp             CCCCCCSBCCCC-EEEESSCCEEEEEECSSCCCSSCBCCBSS-SSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEE
T ss_pred             cCCCEEEecCCC-cEEcCCCcEEEEEEEcCCCCCceeEEEEC-CEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEE
Confidence            456788888888 999999999999999999864 8999999 7777666666542    347999999  799999998


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.    ....++.|.|.
T Consensus        84 a~----~~~~~a~L~V~   96 (104)
T 2eny_A           84 VR----GLTSKASLIVR   96 (104)
T ss_dssp             ET----TEEEEECEEEE
T ss_pred             EC----CeeEEEEEEEe
Confidence            84    45688899998

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.15  E-value=2.2e-11  Score=103.64  Aligned_cols=95  Identities=18%  Similarity=0.268  Sum_probs=74.1

Q ss_pred             CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE-ec-CcceEEecCCCCCceEEEEEE
Q psy8771         716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT-LK-NQTSFVLDELKKWTEYRIWVL  793 (904)
Q Consensus       716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~-~~-~~~~~~i~~L~p~t~Y~~~V~  793 (904)
                      |+.+|....+..++.+++.|+|.+|.. ..+.++.+|.|+++..+...|  .... .. ..+.+++.+|.+++.|.|+|+
T Consensus        10 ~p~~P~~P~v~~v~~~sv~L~W~~P~~-~gg~~i~~Y~Ve~~~~~~~~w--~~~~~~~~~~~~~~v~~L~p~t~Y~frV~   86 (112)
T 1bpv_A           10 PIDPPGKPVPLNITRHTVTLKWAKPEY-TGGFKITSYIVEKRDLPNGRW--LKANFSNILENEFTVSGLTEDAAYEFRVI   86 (112)
T ss_dssp             CCCCCCCCEEEEEETTEEEEECCCCSC-CTTCCCSCCEEEEEETTSCCC--EECCCSCCCSSEEEECSCCSSCCEEEEEE
T ss_pred             CCCCCCCCEEEEeeCCEEEEEECCCCc-CCCCcccEEEEEEEECCCCce--EEeecccCccCEEEECCCCCCCEEEEEEE
Confidence            444677788888999999999998742 333469999999998765443  1111 12 678899999999999999999


Q ss_pred             EeeCCCC-CCCCCcEEeecCC
Q psy8771         794 AGTSIGD-GPSSYPITIRTHE  813 (904)
Q Consensus       794 a~~~~g~-g~~s~~~~~~t~~  813 (904)
                      |.|..|. |++|......|..
T Consensus        87 A~N~~G~~s~~S~~~~~~t~~  107 (112)
T 1bpv_A           87 AKNAAGAISPPSEPSDAITCR  107 (112)
T ss_dssp             EECTTSCEEEEEEEEEEECSC
T ss_pred             EEECCCCCCCCCCCCCCEEeC
Confidence            9999997 9999877766543

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A

Probab=99.14  E-value=1.7e-10  Score=96.92  Aligned_cols=93  Identities=16%  Similarity=0.237  Sum_probs=73.4

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-ccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR  698 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~  698 (904)
                      +.+|.+|++.+++.+++.|+|.++.   +.+.+|.|.|+..+. ... ........++++|.+|+|++.|.|+|+|++..
T Consensus         3 p~~P~~l~v~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~   79 (104)
T 2rb8_A            3 LDAPSQIEVKDVTDTTALITWMPPS---QPVDGFELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGD   79 (104)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEETTCTTCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCCCccEEEEecCCeEEEEEcCCC---CccceEEEEEEECcCCCceEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeCC
Confidence            6789999999999999999999864   679999999987653 222 22345567899999999999999999999999


Q ss_pred             CCCCCCCCeeEEecCCCCC
Q psy8771         699 GEGATTPPIPVRTKQYVPG  717 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~  717 (904)
                      |.|.++ ...++|....|.
T Consensus        80 g~s~p~-~~~~~T~~~~~~   97 (104)
T 2rb8_A           80 MSSNPA-KETFTTGLAAAL   97 (104)
T ss_dssp             EECCCE-EEEEECCC----
T ss_pred             ccCCCE-EEEEECCCCccc
Confidence            988765 466788766554

>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*

Probab=99.14  E-value=7e-10  Score=107.90  Aligned_cols=160  Identities=13%  Similarity=0.107  Sum_probs=106.4

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccC------------------CCCceee-cceEEEEeee--cCCeEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT------------------PDDKLPV-GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~------------------~~~~~~~-~~~~l~i~~l--~d~g~Y~c  173 (904)
                      ..+.+|+++.|.|.+.+.|.+.|.|+|++.....                  ...|+.+ .+++|.|.++  +|+|.|+|
T Consensus         9 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C   88 (208)
T 3r4d_A            9 PQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTL   88 (208)
T ss_dssp             SEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEE
T ss_pred             ceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEE
Confidence            6788999999999999999999999997321110                  1223332 4568999999  69999999


Q ss_pred             EEEecC-cceEEEEEEEEEeecCCCCCCCCCCcceEEE---eecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeE
Q psy8771         174 IAASVL-GVIETSTIVKVQCKYAPLLTLPVAPLDVKIS---EVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYS  245 (904)
Q Consensus       174 ~a~n~~-g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~---~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~  245 (904)
                      .+.|.. +.......|.|.       ..+..|. +...   ......+.|.+...+.+.   .+.|...+.    .....
T Consensus        89 ~~~~~~~~~~~~~~~l~V~-------~~~~~p~-i~~~~~~~~~g~~v~l~C~~~~~pp---~i~W~~~g~~l~~~~~~~  157 (208)
T 3r4d_A           89 DMTDENYRRTQATVRFHVH-------QPVTQPF-LQVTNTTVKELDSVTLTCLSNDIGA---NIQWLFNSQSLQLTERMT  157 (208)
T ss_dssp             EEECSSCEEEEEEEEEEEE-------CCCCCCE-EEESCSSCCTTCCEEEEEECSCTTC---EEEEEETTEECCCCSSEE
T ss_pred             EEEcccCceeEEEEEEEec-------cCCCCCE-EecCCceEeeCCCEEEEEECCCCCC---ceEEEECCEeCCCCCCeE
Confidence            999985 556677777777       3333332 1111   123456777777664432   344544321    11111


Q ss_pred             EeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771         246 EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT  288 (904)
Q Consensus       246 ~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~  288 (904)
                       .. .....+.|.++...+.+.|+|.|.|..|... +.++.+.
T Consensus       158 -~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-s~~~~l~  197 (208)
T 3r4d_A          158 -LS-QNNSILRIDPIKREDAGEYQCEISNPVSVRR-SNSIKLD  197 (208)
T ss_dssp             -EE-TTTTEEEESSCCGGGCEEEEEEEECTTCCEE-CCCEEEC
T ss_pred             -Ec-CCCCEEEEeccCHHhCeEEEEEEecCCCccc-CCceeee
Confidence             11 2226799999999999999999999999754 5555554

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}

Probab=99.14  E-value=2.5e-10  Score=95.26  Aligned_cols=86  Identities=24%  Similarity=0.368  Sum_probs=71.3

Q ss_pred             CCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCC-CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         200 LPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT-PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       200 ~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      .|++|.++++...+.+++.|+|.+|...+.+|.|+|+..+... ..........+.++|.+|+|++.|.|+|+|.|..|.
T Consensus         1 ~p~~P~~l~~~~~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n~~g~   80 (100)
T 3b83_A            1 MLQPPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLEPNTTYEIRIVARNGQQY   80 (100)
T ss_dssp             CCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEEEECTTEEEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred             CCccCCccEEEEecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEEEECCcceEEEECCCCCCCEEEEEEEEEeCCCC
Confidence            4789999999999999999999999778999999998765333 333334456789999999999999999999999998


Q ss_pred             CCCCCCe
Q psy8771         279 GPPSSPA  285 (904)
Q Consensus       279 s~~s~~~  285 (904)
                      |.++...
T Consensus        81 s~p~~~~   87 (100)
T 3b83_A           81 SPPVSTT   87 (100)
T ss_dssp             CCCEEEE
T ss_pred             CCCEEEE
Confidence            7765443

>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}

Probab=99.13  E-value=1.2e-10  Score=117.10  Aligned_cols=158  Identities=14%  Similarity=0.114  Sum_probs=97.9

Q ss_pred             EcCCCCceEEecCCCeEEEEEEcc---CCCCeEEEeeCCcccc------------------------------CCCCcee
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVG---SPMPFVKWRKGQNIEL------------------------------TPDDKLP  154 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g---~p~p~i~W~k~~~~~~------------------------------~~~~~~~  154 (904)
                      ..++.. +.+.+|++++|.|.+.|   .|.+.|.|+|+ +...                              ....|+.
T Consensus         6 ~~~~~~-v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~   83 (250)
T 2fbo_J            6 RTTHTE-VEVHAGGTVELPCSYQLANDTQPPVISWLKG-ASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRAS   83 (250)
T ss_dssp             ECSCSE-EEECTTSCEEECCEEEECSCCSCCEEEEEEE-EETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEE
T ss_pred             EcCCCc-eEEecCCeEEEEEEeEcCCCCCceEEEEEeC-CCCCccEEEEeeccccccccccccccccccccCCCcCceEE
Confidence            334445 89999999999999998   88999999998 4221                              0123333


Q ss_pred             ec---ceEEEEeee--cCCeEEEEEEEecCcce-----EEEEEEEEEeecCCCCCCCCC-------CcceEEEeecCCeE
Q psy8771         155 VG---RNVLTLDRV--TESENYTCIAASVLGVI-----ETSTIVKVQCKYAPLLTLPVA-------PLDVKISEVTATSV  217 (904)
Q Consensus       155 ~~---~~~l~i~~l--~d~g~Y~c~a~n~~g~~-----~~~~~l~v~~~~~~~~~~P~~-------p~~l~~~~~~~~sv  217 (904)
                      +.   +.+|.|.++  +|+|.|+|.|.|..+..     +..+.|.|.       ..|.+       +..+.+  .....+
T Consensus        84 ~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~-------~~~~~~~~~~~~~~~~~v--~~g~~v  154 (250)
T 2fbo_J           84 VANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVT-------GHTPSNNVHVSTAEVVQV--DEGNDI  154 (250)
T ss_dssp             CSCTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEET-------TTSCCSCCEECCCSEEEC--CTTCCE
T ss_pred             eccCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEe-------ccCCCCeEEEecCceEEe--cCCCcE
Confidence            32   358999999  69999999999987753     456777776       22211       111111  123445


Q ss_pred             EEEEeCCCccceEEEEEEEeCCCCCCe------EE-------------------eecceeceEEEcCCCCCCeEEEEEEE
Q psy8771         218 RLDWTYPSETLLYYVIQYKPKAANTPY------SE-------------------ISGIITTYYTVRNLSPYTEYEFYIIA  272 (904)
Q Consensus       218 ~l~W~~~~~~~~~y~v~~~~~~~~~~~------~~-------------------~~~~~~~~~~i~~L~p~~~Y~~~v~a  272 (904)
                      .|.+...+.+..  .|.|...+.....      ..                   ........|.|.++++.+.+.|+|.|
T Consensus       155 ~L~C~~~g~p~p--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a  232 (250)
T 2fbo_J          155 TMTCPCTDCANA--NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCEL  232 (250)
T ss_dssp             EECCCEESCTTC--EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEE
T ss_pred             EEEEEecCCCCC--eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEe
Confidence            555554322222  2333222110000      00                   00002268999999999999999999


Q ss_pred             EcCCCC
Q psy8771         273 VNNLGR  278 (904)
Q Consensus       273 ~n~~g~  278 (904)
                      .|..|.
T Consensus       233 ~N~~g~  238 (250)
T 2fbo_J          233 ATGQGE  238 (250)
T ss_dssp             ESSSSG
T ss_pred             cCCccc
Confidence            997774

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.13  E-value=1.9e-10  Score=99.04  Aligned_cols=108  Identities=23%  Similarity=0.310  Sum_probs=84.9

Q ss_pred             CCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       198 ~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      .+.|.+|.+|++...+.+++.|+|.++.+.+.+|.|.|...+.. ..........+.+.|.+|+|++.|.|+|+|.|..|
T Consensus         5 ~t~p~~P~~l~~~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~-~~~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~~~   83 (115)
T 2cuh_A            5 SSGPDGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAP-PLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPN   83 (115)
T ss_dssp             CCCCSSCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSC-CEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTE
T ss_pred             ccCCCCCcceEEEeccCCeEEEEEECCCCCccEEEEEEEcCCCC-cEEEEECCCccEEEEeCCCCCCEEEEEEEEEeCCC
Confidence            47889999999999999999999999988899999999875432 22223344568999999999999999999999888


Q ss_pred             CCCCCCCeEEecCCCCCCCCCCceEecccCCCee
Q psy8771         278 RGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTM  311 (904)
Q Consensus       278 ~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v  311 (904)
                      .+.+.. ..+.+.    +.+|.+|.+..++.+++
T Consensus        84 ~s~~~~-~~~~T~----~~~P~~l~~~~vt~~s~  112 (115)
T 2cuh_A           84 LTSPAS-ITFTTG----LEAPRDLEAKEVTPSGP  112 (115)
T ss_dssp             ECCCEE-EEEESC----CCCTTTSSSCCCCCCCC
T ss_pred             cCCCEE-EEEEeC----CCCCCCcEEEEecCCcc
Confidence            765433 444443    35788999888876654

>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.4e-10  Score=97.92  Aligned_cols=83  Identities=18%  Similarity=0.273  Sum_probs=70.4

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..||.|...+.+ +.+.+|+.+.|.|.+.| |.+.|.|+|+ +..+....++.+.    ...|.|.++  +|+|.|+|.|
T Consensus         6 ~~pp~~~~~~~~-~~v~~G~~v~l~C~~~~-~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a   82 (103)
T 2edf_A            6 SGPAAIIKPLED-QWVAPGEDVELRCELSR-AGTPVHWLKD-RKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEV   82 (103)
T ss_dssp             CCCCCEEECCCC-EEECTTSCEEECCEESS-SSCCCCEEES-SCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEEC
T ss_pred             CCCcEEEecCCc-cEEcCCCCEEEEEEEeC-CCCcEEEEEC-CEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEE
Confidence            568889998888 99999999999999998 8889999999 7777666666642    237999998  6999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                      .|    ....+.|.|.
T Consensus        83 ~n----~~~~~~l~V~   94 (103)
T 2edf_A           83 EA----SKSTASLHVE   94 (103)
T ss_dssp             SS----CEEEEEEEEC
T ss_pred             cc----CCcEEEEEEe
Confidence            98    3677788888

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A

Probab=99.13  E-value=3.5e-10  Score=94.42  Aligned_cols=80  Identities=20%  Similarity=0.309  Sum_probs=67.7

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc-c-ceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA-K-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSP  697 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~  697 (904)
                      .+.+|.+|++.+++.+++.|+|.++. .++.+.+|.|.|...++.. . ........++++|.+|+|++.|.|+|+|++.
T Consensus         4 ~~~~P~~l~v~~~t~~Sv~l~W~~p~-~~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~   82 (101)
T 3k2m_C            4 VSSVPTKLEVVAATPTSLLISWDAPM-SSSSVYYYRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVYAWGE   82 (101)
T ss_dssp             EEBSSCEEEEEEEETTEEEEEECCCC-TTSCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred             CCCCCcceEEeecCCCEEEEEecCCC-CCCceeeEEEEEEECCCCCccEEEEcCCCccEEEECCCCCCCEEEEEEEEEeC
Confidence            35789999999999999999999986 4678999999999876532 2 2334456789999999999999999999999


Q ss_pred             CCC
Q psy8771         698 RGE  700 (904)
Q Consensus       698 ~G~  700 (904)
                      .|.
T Consensus        83 ~~~   85 (101)
T 3k2m_C           83 DSA   85 (101)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            888

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A

Probab=99.13  E-value=3.6e-10  Score=94.40  Aligned_cols=78  Identities=24%  Similarity=0.413  Sum_probs=66.1

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      +|.+|++...+.+++.|+|++|.   .++.+.+|.|.|...++... .....+. ..++++|.+|.|++.|.|+|+|.+.
T Consensus         7 ~P~~l~v~~~t~~Sv~l~W~~p~---~~~~i~~Y~v~y~~~~~~~~-~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~   82 (101)
T 3k2m_C            7 VPTKLEVVAATPTSLLISWDAPM---SSSSVYYYRITYGETGGNSP-VQEFTVPYSSSTATISGLSPGVDYTITVYAWGE   82 (101)
T ss_dssp             SSCEEEEEEEETTEEEEEECCCC---TTSCCCEEEEEEEETTCSSC-CEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred             CCcceEEeecCCCEEEEEecCCC---CCCceeeEEEEEEECCCCCc-cEEEEcCCCccEEEECCCCCCCEEEEEEEEEeC
Confidence            68999999999999999999984   46889999999998764322 2333455 8899999999999999999999998


Q ss_pred             CCC
Q psy8771         798 IGD  800 (904)
Q Consensus       798 ~g~  800 (904)
                      .|.
T Consensus        83 ~~~   85 (101)
T 3k2m_C           83 DSA   85 (101)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            887

>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=99.13  E-value=8.2e-10  Score=104.94  Aligned_cols=153  Identities=14%  Similarity=0.129  Sum_probs=99.1

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEEEEEecCcceEEEEEEEEEe
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQC  192 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c~a~n~~g~~~~~~~l~v~~  192 (904)
                      ..+.+|+.++|.|.+.|.|.|  .+.|+|+ +..+...... .....|.|...+|+|.|+|.|.|.   ....+.|.|. 
T Consensus         8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~-~~~l~~~~~~-~~~~~l~i~~~~d~G~Y~C~~~n~---~~~~~~l~V~-   81 (184)
T 3b5h_A            8 TVEDLGSKILLTCSLNDSATEVTGHRWLKG-GVVLKEDALP-GQKTEFKVDSDDQWGEYSCVFLPE---PMGTANIQLH-   81 (184)
T ss_dssp             EEEEETTEEEEEEEEESCSSCCCEEEEESS-SEEEECTTCC-CSEEEEEECGGGCCEEEEEEEEST---TSCEEEEEEC-
T ss_pred             EEEecCCCEEEEEECCCCCCCceEEEEEeC-CEEeeccccc-CCcEEEEEechhhCeEEEEEEECC---cCcEEEEEEe-
Confidence            677899999999999998887  8999999 6666443322 234567777678999999999982   2355667776 


Q ss_pred             ecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCcc-ceEEEEEEEeCCC----------CCCeEEeecceeceEEEcCCC
Q psy8771         193 KYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET-LLYYVIQYKPKAA----------NTPYSEISGIITTYYTVRNLS  261 (904)
Q Consensus       193 ~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~-~~~y~v~~~~~~~----------~~~~~~~~~~~~~~~~i~~L~  261 (904)
                       ..|...  ..+....+  .....++|.+...+.+ ...  +.|.....          ...+..........+.|.++.
T Consensus        82 -~~P~~~--~~~~~~~~--~~g~~~~l~C~~~g~p~~~~--i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~  154 (184)
T 3b5h_A           82 -GPPRVK--AVKSSEHI--NEGETAMLVCKSESVPPVTD--WAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLN  154 (184)
T ss_dssp             -CSCCCE--ESCSEEEE--CTTSCEEEEEECCCSSCCCE--EEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCC
T ss_pred             -cCCcee--ecCCCcEE--cCCCcEEEEEEECCCCCCCe--EEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecc
Confidence             222111  12222222  3345677777765444 333  33333110          012222222334589999999


Q ss_pred             -CCCeEEEEEEEEcCCCCCC
Q psy8771         262 -PYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       262 -p~~~Y~~~v~a~n~~g~s~  280 (904)
                       +.+.+.|+|.|.|..|...
T Consensus       155 ~~~d~G~Y~C~a~N~~g~~~  174 (184)
T 3b5h_A          155 MEADPGQYRCNGTSSKGSDQ  174 (184)
T ss_dssp             TTTSSEEEEEEEEETTEEEE
T ss_pred             ccccCceEEEEEEeCCCcce
Confidence             9999999999999988643

>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3

Probab=99.13  E-value=1.4e-10  Score=109.03  Aligned_cols=144  Identities=14%  Similarity=0.170  Sum_probs=97.6

Q ss_pred             eEEecCCCeEEEEEEcc--CCCCeEEEeeCCcccc----------CCCCceee-cceEEEEeee--cCCeEEEEEEEecC
Q psy8771         115 LEVMLDSPLNLSCVAVG--SPMPFVKWRKGQNIEL----------TPDDKLPV-GRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g--~p~p~i~W~k~~~~~~----------~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      +.+.+|++++|.|...+  .|.+.|.|+|+ +..+          ....|+.+ .+++|.|.++  +|+|.|+|.|.|..
T Consensus         6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~-~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~   84 (176)
T 1hng_A            6 VWGALGHGINLNIPNFQMTDDIDEVRWERG-STLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN   84 (176)
T ss_dssp             EEEETTSCEEECCTTCCCCTTEEEEEEEET-TEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred             EEEEcCCcEEEcCCCCCcccccccEEEEeC-CceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC
Confidence            77899999999995544  66789999999 4322          23456554 5678999999  79999999999999


Q ss_pred             cce--EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEE
Q psy8771         180 GVI--ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTV  257 (904)
Q Consensus       180 g~~--~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i  257 (904)
                      |..  +..+.|.|.       ..+..|.   +. .....++|.+...+.+..  .+.|...+  ...   ...  ..+.|
T Consensus        85 g~~~~~~~~~l~V~-------~~~~~p~---i~-~~~~~v~L~C~~~g~p~p--~i~W~~~g--~~l---~~~--~~~~i  144 (176)
T 1hng_A           85 GTRILNKALDLRIL-------EMVSKPM---IY-WECSNATLTCEVLEGTDV--ELKLYQGK--EHL---RSL--RQKTM  144 (176)
T ss_dssp             CCEEEEEEEEEEEE-------CCCCCCE---EE-EETTTTEEEEECSSCSSC--EEEEEETT--EEE---EEE--SSSEE
T ss_pred             CCEEEEEEEEEEEe-------CCCCCCE---EE-ecCCcEEEEEEecCCCCc--EEEEEECC--EEC---CCC--CcEEE
Confidence            986  666777777       4433342   22 223346777766544433  34555432  111   111  22455


Q ss_pred             cCCCCCCeEEEEEEEEcCCCCC
Q psy8771         258 RNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       258 ~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+...+.+.|+|.|.|..|..
T Consensus       145 ~~~~~~d~G~Y~C~a~N~~g~~  166 (176)
T 1hng_A          145 SYQWTNLRAPFKCKAVNRVSQE  166 (176)
T ss_dssp             EEECSCCSSCEEEEEEETTEEE
T ss_pred             EEEEccCCeEEEEEEEecCCCc
Confidence            5777899999999999998864

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.12  E-value=7.1e-10  Score=93.37  Aligned_cols=92  Identities=27%  Similarity=0.274  Sum_probs=74.4

Q ss_pred             CCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEe-ecceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771         198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEI-SGIITTYYTVRNLSPYTEYEFYIIAVNNL  276 (904)
Q Consensus       198 ~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~  276 (904)
                      ++.|.+|.+|++...+.+++.|+|.++.+.+.+|.|.|+..++  .+..+ .....++++|.+|+|++.|.|+|+|.|..
T Consensus         5 ~t~p~~P~~l~v~~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~--~~~~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~~   82 (105)
T 2cum_A            5 SSGLEAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGG--QTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQ   82 (105)
T ss_dssp             CTTCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTS--CEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBTT
T ss_pred             ccCCCCCCceEEEeccCCEEEEEEcCCCCccceEEEEEEeCCC--ceEEEEECCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            4789999999999999999999999998889999999987533  33332 34556899999999999999999999999


Q ss_pred             CCCCCCCCeEEecCCC
Q psy8771         277 GRGPPSSPAVITTGET  292 (904)
Q Consensus       277 g~s~~s~~~~~~t~~~  292 (904)
                      |.+.+.. ..+.+...
T Consensus        83 g~s~~~~-~~~~T~~~   97 (105)
T 2cum_A           83 SLLPPVS-TSFTTGGL   97 (105)
T ss_dssp             BCCCCEE-EEEECCCS
T ss_pred             cccCCEE-EEEEeCCc
Confidence            8876533 44555443

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A

Probab=99.12  E-value=5.1e-10  Score=118.04  Aligned_cols=201  Identities=13%  Similarity=0.104  Sum_probs=114.5

Q ss_pred             eecccccccccceEEEEeeeccCC-eeeeeeeeccCCCCCCCCeEE--cCCCCceEEecC---CCeEEEEE-EccCCCCe
Q psy8771          64 ITHPPTRAARSHARLAAQSVLRRG-RLAHAVRQVADPVRRVPPQFS--IPPPALLEVMLD---SPLNLSCV-AVGSPMPF  136 (904)
Q Consensus        64 i~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~v~~~~~~~~P~~~--~~~~~~~~~~~g---~~~~l~C~-~~g~p~p~  136 (904)
                      +....+...|.....|.......| ....+.+.|.     .+|.+.  ..+.. +.+.+|   +.+.|.|. +.|.|.|.
T Consensus        94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-----~~p~~~~~~~~~~-~~~~~g~~~~~~~l~C~~~~~~p~~~  167 (331)
T 3u83_A           94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVM-----AKPTNWIEGTQAV-LRAKKGQDDKVLVATCTSANGKPPSV  167 (331)
T ss_dssp             EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE-----BCCEEEEEECSSC-EEECTTCCCCEEEEEEEEEEEBSCCE
T ss_pred             EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEe-----cCCcceeecCCCc-eeecCCCccceEEEEEEecCCcCCce
Confidence            444444445555555553433333 3334444443     355552  24445 888888   77999997 88999999


Q ss_pred             EEEeeCCccccCCCCceee------cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceE
Q psy8771         137 VKWRKGQNIELTPDDKLPV------GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVK  208 (904)
Q Consensus       137 i~W~k~~~~~~~~~~~~~~------~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~  208 (904)
                      |.|+|+..... .......      -...|.|..+  +|+|.|+|.|.|..|..+..+.|.|.....  ... .++....
T Consensus       168 i~W~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~--~~~-~~~~~~~  243 (331)
T 3u83_A          168 VSWETRLKGEA-EYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPE--VTI-EGFDGNW  243 (331)
T ss_dssp             EEEEESSCCEE-EEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEE--EEE-ECCCSCC
T ss_pred             EEEEcCCCCcc-ccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCe--EEE-ecCCCce
Confidence            99999622111 1111111      1245777766  699999999999999888888888762211  110 0111111


Q ss_pred             EEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEc-CCCCCCeEEEEEEEEcCCCCC
Q psy8771         209 ISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR-NLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       209 ~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~-~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      +  .....++|.+...+.+... .+.|...+.......  ......+.|. ++...+.+.|+|.|.|..|..
T Consensus       244 ~--~~g~~~~l~C~~~g~p~p~-~i~W~~~~~~~~~~~--~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~  310 (331)
T 3u83_A          244 Y--LQRMDVKLTCKADANPPAT-EYHWTTLNGSLPKGV--EAQNRTLFFKGPINYSLAGTYICEATNPIGTR  310 (331)
T ss_dssp             B--TTCCCEEEEEEEEEESCCC-EEEEEETTBSCCTTE--EEETTEEEECSCCCGGGCEEEEEEEEETTEEE
T ss_pred             E--eCCCeEEEEEeCcCCCCCC-EEEEEECCCcccccc--eecCcEEEEeCCCccccCeEEEEEEEeccccc
Confidence            1  1124455555543222211 134443322111101  1123579999 899999999999999999864

>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}

Probab=99.11  E-value=1.2e-09  Score=106.98  Aligned_cols=149  Identities=17%  Similarity=0.227  Sum_probs=105.3

Q ss_pred             CCCCcEEEeccCCceEEEEeCCC-----CCCCceecccccccccceEEEEeeeccCCe-eeeeeeeccCCC---------
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPE-----TPNGQITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQVADPV---------  100 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~-----~~~g~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~---------  100 (904)
                      ....|.|...+.+.+.|.|.+..     ..++.+........+...+.|...+..... ...+.+.+....         
T Consensus        34 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~  113 (218)
T 3k0w_A           34 QFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDG  113 (218)
T ss_dssp             SBEEEECEETTTTSSEEEEEETTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCS
T ss_pred             CcEEEEeeecCCCCCEEEEEECCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCccccccccc
Confidence            56667777777778899997753     223445555555556555556555443322 223444443221         


Q ss_pred             -CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         101 -RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       101 -~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                       ...+|.+...+.. ..+..|+.+.|.|.+.|.|.+.|.|+++ +..+...     ....|.|.++  +|+|.|+|.|.|
T Consensus       114 ~~~~~p~~~~~~~~-~~v~~G~~v~L~C~~~g~p~~~v~W~~~-~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n  186 (218)
T 3k0w_A          114 VSESKLQICVEPTS-QKLMPGSTLVLQCVAVGSPIPHYQWFKN-ELPLTHE-----TKKLYMVPYVDLEHQGTYWCHVYN  186 (218)
T ss_dssp             BCCSSCEEEECCCC-EEECTTCCEEEECEEEBSSCCEEEEEET-TEECTTC-----CSSEEEESSCCGGGCEEEEEEEEC
T ss_pred             ccCCCceEEECCCc-eeecCCCcEEEEEEecccCCCeEEEEEC-CEECCCC-----CCCEEEEeecChhcCEEEEEEEEc
Confidence             1234788888888 9999999999999999999999999999 6665443     3458999998  699999999999


Q ss_pred             cCcc-eEEEEEEEEE
Q psy8771         178 VLGV-IETSTIVKVQ  191 (904)
Q Consensus       178 ~~g~-~~~~~~l~v~  191 (904)
                      ..|. .+..+.|.|.
T Consensus       187 ~~g~~~s~~~~l~V~  201 (218)
T 3k0w_A          187 DRDSQDSKKVEIIID  201 (218)
T ss_dssp             SSCEEECCCEEEEEC
T ss_pred             CCCCceeeeEEEEEe
Confidence            8887 5566677776

>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4

Probab=99.11  E-value=2.7e-10  Score=98.91  Aligned_cols=87  Identities=22%  Similarity=0.308  Sum_probs=69.4

Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--------cceEEEEeee--cCCe
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--------GRNVLTLDRV--TESE  169 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--------~~~~l~i~~l--~d~g  169 (904)
                      .+..||.|......  .  ......|.|.+.|.|.|.|.|+|+ |..+....+...        ..+.|.|.++  +|+|
T Consensus         4 ~V~~pP~i~~~~~~--~--~~~~~~l~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G   78 (118)
T 1wwc_A            4 TVYYPPRVVSLEEP--E--LRLEHCIEFVVRGNPPPTLHWLHN-GQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNG   78 (118)
T ss_dssp             CCCCCCCCCCCCCC--C--CCCEEEEEEEEECSSCCEEEEEET-TEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCE
T ss_pred             EEecCCceeccCCC--e--eccceEEEEEeeeeCCCeEEEEEC-CEECCCCCceeEEEeccCccccEEEEECCCChhcCE
Confidence            45678887665443  2  226678999999999999999999 777766654443        3568999999  6999


Q ss_pred             EEEEEEEecCcceEEEEEEEEE
Q psy8771         170 NYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       170 ~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      .|+|.|.|..|..++++.|.|.
T Consensus        79 ~Y~C~a~N~~G~~~~~~~l~v~  100 (118)
T 1wwc_A           79 NYTLIAKNPLGTANQTINGHFL  100 (118)
T ss_dssp             EEEEEEEETTEEEEEEEEECCS
T ss_pred             EEEEEEECCCCeEeeEEEEEEc
Confidence            9999999999999998888777

>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=2.7e-10  Score=96.14  Aligned_cols=90  Identities=26%  Similarity=0.399  Sum_probs=75.3

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec-ce---EEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG-RN---VLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-~~---~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..||.|...+.+ +.+.+|+++.|.|. .|.|.+.|.|+|+ +..+..+.++.+. ++   .|.|.++  +|+|.|+|. 
T Consensus         6 ~~pp~~~~~~~~-~~v~~G~~v~l~C~-~~~p~~~v~W~k~-~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~-   81 (103)
T 2dku_A            6 SGANCFTEELTN-LQVEEKGTAVFTCK-TEHPAATVTWRKG-LLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD-   81 (103)
T ss_dssp             CCCCCCSSCCCC-EEEETTSEEEEEEE-CSSCCSCCEEEES-SCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE-
T ss_pred             CCCCEeEecCCc-EEEeCCCcEEEEEE-eCCCCCeEEEEeC-CEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE-
Confidence            467889888888 99999999999999 5999999999999 7777776676653 33   8999999  699999998 


Q ss_pred             EecCcceEEEEEEEEEeecCCCCCCCCCCc
Q psy8771         176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPL  205 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~  205 (904)
                         .|.....+.|.|.       ..|.+|.
T Consensus        82 ---~g~~~~~~~l~V~-------~~p~~p~  101 (103)
T 2dku_A           82 ---IGQAQSRAQLLVQ-------GRRSGPS  101 (103)
T ss_dssp             ---CSSCBCCEEEEEE-------CSCCCCS
T ss_pred             ---eCCceEEEEEEEe-------CccCCCC
Confidence               6777888999998       6666653

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}

Probab=99.11  E-value=2.7e-10  Score=95.05  Aligned_cols=82  Identities=26%  Similarity=0.391  Sum_probs=67.6

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      .+|.+|++..++.+++.|+|++|.     +.+.+|.|+|+..+..... ....+. ..+.++|.+|+|++.|.|+|+|.|
T Consensus         3 ~~P~~l~~~~~~~~sv~lsW~pP~-----~~i~~Y~v~y~~~~~~~~~-~~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n   76 (100)
T 3b83_A            3 QPPFNIKVTNITLTTAVVTWQPPI-----LPIEGILVTFGRKNDPSDE-TTVDLTSSITSLTLTNLEPNTTYEIRIVARN   76 (100)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEESSCTTTC-EEEEECTTEEEEEECSCCTTCEEEEEEEEEE
T ss_pred             ccCCccEEEEecCCEEEEEEcCCc-----ccCCEEEEEEEECCCCCCc-eEEEECCcceEEEECCCCCCCEEEEEEEEEe
Confidence            368999999999999999999984     2589999999977643222 233445 889999999999999999999999


Q ss_pred             CCCCCCCCC
Q psy8771         797 SIGDGPSSY  805 (904)
Q Consensus       797 ~~g~g~~s~  805 (904)
                      ..|.|.++.
T Consensus        77 ~~g~s~p~~   85 (100)
T 3b83_A           77 GQQYSPPVS   85 (100)
T ss_dssp             TTEECCCEE
T ss_pred             CCCCCCCEE
Confidence            999887665

>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*

Probab=99.11  E-value=3.4e-10  Score=106.68  Aligned_cols=153  Identities=14%  Similarity=0.109  Sum_probs=100.3

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEec
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      ..+|.|...|.. +.+.+|++++|.|.+.|.|.+ .+.|+|+ +..+..      .++.|.|.++  +|+|.|+|.+.|.
T Consensus         2 ~~~P~i~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~i~W~~~-~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~~~   73 (176)
T 1f2q_A            2 PQKPKVSLNPPW-NRIFKGENVTLTCNGNNFFEVSSTKWFHN-GSLSEE------TNSSLNIVNAKFEDSGEYKCQHQQV   73 (176)
T ss_dssp             --CCCCEEESSC-SEEETTCCEEEECCTTCC----CCEEEET-TEECSC------CSSEEEECSCCGGGCEEEEEECTTS
T ss_pred             CCCCEEEcCCCC-cceecCCcEEEEEeCCCCCCcceEEEEEC-CeECCC------CceEEEEeccceecCEEEEEEcCCc
Confidence            346778888887 899999999999999999986 6999999 655543      4678999999  6999999999886


Q ss_pred             CcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCCCCCCeEEeecceeceEEE
Q psy8771         179 LGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTV  257 (904)
Q Consensus       179 ~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i  257 (904)
                      .+.  ....|.|.  ..+....  ++ ...+  .....++|.+... +.+.  -.+.|...+...    ........+.|
T Consensus        74 ~~s--~~~~l~V~--~~~~~~~--~~-~~~~--~~g~~~~l~C~~~~~~p~--~~~~W~~~g~~~----~~~~~~~~L~i  138 (176)
T 1f2q_A           74 NES--EPVYLEVF--SDWLLLQ--AS-AEVV--MEGQPLFLRCHGWRNWDV--YKVIYYKDGEAL----KYWYENHNISI  138 (176)
T ss_dssp             SCC--CCEEEEEE--CSSEEEE--ES-CSEE--ETTSCEEEEEEEGGGCCE--EEEEEEETTEEC----CSCCCSSEEEE
T ss_pred             ccc--ccEEEEEe--Ccceeec--CC-ccee--eCCCCEEEEEEecCCCCc--eEEEEEECCEEE----eeecCCCeEEE
Confidence            654  44556665  1100000  11 1122  2345667777653 2222  334554432111    11223478999


Q ss_pred             cCCCCCCeEEEEEEEEcCCC
Q psy8771         258 RNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       258 ~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      .++...+.+.|+|.|.|..+
T Consensus       139 ~~v~~~d~G~Y~C~a~n~~~  158 (176)
T 1f2q_A          139 TNATVEDSGTYYCTGKVWQL  158 (176)
T ss_dssp             SSCCGGGCEEEEEEEEETTE
T ss_pred             CCCCcccCEEEEEEEEeCCc
Confidence            99999999999999999744

>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*

Probab=99.11  E-value=6.7e-10  Score=114.51  Aligned_cols=153  Identities=16%  Similarity=0.168  Sum_probs=105.2

Q ss_pred             CCCCcEEEeccCCceE-EEEeCCC------------CCCCceecccccccccceEEEEeeeccCCee-eeeeeeccCCCC
Q psy8771          36 APRDVQVRPLSSSTMV-IQWDEPE------------TPNGQITHPPTRAARSHARLAAQSVLRRGRL-AHAVRQVADPVR  101 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~-v~W~~~~------------~~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~v~~~~~  101 (904)
                      ....|.|...+.+... +.|....            ..++.++.......+.....|...+...+.. ..+.+.+.. ..
T Consensus       105 ~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~-~~  183 (289)
T 3ejj_X          105 QEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNR-VH  183 (289)
T ss_dssp             SCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEES-SC
T ss_pred             CceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEE-CC
Confidence            5666777766655544 9996421            1133344444444455445555553333332 233444432 12


Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCCeEEEeeCCccccCCCCce------eecceEEEEeee--cCCeEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMPFVKWRKGQNIELTPDDKL------PVGRNVLTLDRV--TESENYT  172 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~~~------~~~~~~l~i~~l--~d~g~Y~  172 (904)
                      ..+|.|...+.. ..+.+|+.+.|.|.+.| .|.+.|.|+++ +..+......      ....+.|.|.++  +|+|.|+
T Consensus       184 ~~~p~i~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~  261 (289)
T 3ejj_X          184 PEPPQIKLEPSK-LVRIRGEAAQIVCSATNAEVGFNVILKRG-DTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYS  261 (289)
T ss_dssp             CCCCEEEEESSS-EECCSSSCEEEEEEEEESSSCCEEEEEET-TEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEE
T ss_pred             CCCCeEEecCCc-eEEEeCCcEEEEEEeCCCCCceEEEEEEC-CEEeeccCCcccccceEEeeEEEEEEeecccCCEEEE
Confidence            478999888887 88889999999999999 79999999999 6666543221      224678999998  6999999


Q ss_pred             EEEEecCcceEEEEEEEEE
Q psy8771         173 CIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|.|..|..++++.|.+.
T Consensus       262 C~a~N~~G~~~~s~~L~~~  280 (289)
T 3ejj_X          262 CVASNDVGTRTATMNFQVV  280 (289)
T ss_dssp             EEEECSSCEEEEEEEEECC
T ss_pred             EEEEcCCCCccccEEEEEE
Confidence            9999999999999998877

>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}

Probab=99.10  E-value=2.8e-10  Score=97.12  Aligned_cols=88  Identities=14%  Similarity=0.229  Sum_probs=69.4

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcccc-------CCCCceee-----cceEEEEeee--cC
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIEL-------TPDDKLPV-----GRNVLTLDRV--TE  167 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~-------~~~~~~~~-----~~~~l~i~~l--~d  167 (904)
                      ..+|.+...|.+ +.+.+|++++|.|.+.|.|.+.|.|+|++...+       ....|+.+     .+.+|.|.++  +|
T Consensus         4 ~~~p~~~~~~~~-~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D   82 (108)
T 3m45_A            4 KGSQGQFPLTQN-VTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSD   82 (108)
T ss_dssp             ----CCCEECCC-EEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGG
T ss_pred             ccCCCccccCCe-eEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhH
Confidence            345667777777 999999999999999999999999999743121       12335554     4678999999  69


Q ss_pred             CeEEEEEEEecCcceEEEEEEEEE
Q psy8771         168 SENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +|.|+|.|.| .|..+..+.|.|.
T Consensus        83 ~G~Y~C~~~n-~~~~~~~~~L~V~  105 (108)
T 3m45_A           83 EGQYTCSLFT-MPVKTSKAYLTVL  105 (108)
T ss_dssp             CEEEEEEECS-SSCEEEEEEEEEE
T ss_pred             CeEEEEEEEc-CCCcEEEEEEEEE
Confidence            9999999999 8888899999988

>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}

Probab=99.10  E-value=4.6e-10  Score=92.04  Aligned_cols=81  Identities=26%  Similarity=0.469  Sum_probs=66.9

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      ++.|...|.. ..+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+...     ..+.|.|.++  +|+|.|+|.|.|..|.
T Consensus         3 ~~~i~~~p~~-~~v~~G~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~   75 (91)
T 3bfo_A            3 KLQICVEPTS-QKLMPGSTLVLQCVAVGSPIPHYQWFKN-ELPLTHE-----TKKLYMVPYVDLEHQGTYWCHVYNDRDS   75 (91)
T ss_dssp             CCEEEECCCC-EEECTTSCEEEECEEECSSCCEEEEEET-TEECTTC-----CSSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred             ceEEEECCCc-cEecCCCcEEEEEEeccCCCCEEEEEcC-CeeCCcC-----CCCeEEECCCCHHhCEEEEEEEEcCCCC
Confidence            5678888888 8999999999999999999999999999 6555433     2468999999  7999999999999997


Q ss_pred             eE-EEEEEEEE
Q psy8771         182 IE-TSTIVKVQ  191 (904)
Q Consensus       182 ~~-~~~~l~v~  191 (904)
                      .. ..+.|.|.
T Consensus        76 ~~s~~~~l~V~   86 (91)
T 3bfo_A           76 QDSKKVEIIID   86 (91)
T ss_dssp             EECCCEEEEEC
T ss_pred             EEeeeEEEEEe
Confidence            54 44555554

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.10  E-value=4.5e-10  Score=94.87  Aligned_cols=65  Identities=17%  Similarity=0.072  Sum_probs=47.3

Q ss_pred             CceeeEEEEEEeCCcc----------ccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCC
Q psy8771         649 ENIISYELYWNDTYAK----------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY  714 (904)
Q Consensus       649 ~~~~~y~v~~~~~~~~----------~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~  714 (904)
                      +.+.+|+|+|...++.          .......+..++++|.+|.|++.|.|+|+|++..|.+.+. .....|...
T Consensus        34 g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~-~~~~~T~~~  108 (112)
T 2cui_A           34 GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSI-QGTARTLSG  108 (112)
T ss_dssp             TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEE-EEEEECCCC
T ss_pred             CCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCCCEEEEEEEEEECCcccCCE-EEEEEECCC
Confidence            4688999999877543          1233444567899999999999999999999987765433 345555543

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*

Probab=99.09  E-value=1.9e-10  Score=98.06  Aligned_cols=96  Identities=31%  Similarity=0.491  Sum_probs=70.7

Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVL  793 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~  793 (904)
                      +|. +|.+|.+...+.+++.|+|++|     +|.+.+|.|.|+..++... .....+. ..++++|.+|.|++.|.|+|+
T Consensus         3 vP~-~P~~L~v~~~t~~Sv~lsW~~p-----~g~i~~Y~v~y~~~~~~~~-~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~   75 (114)
T 3qwq_B            3 VSD-VPRDLEVVAATPTSLLISWDSG-----RGSYQYYRITYGETGGNSP-VQEFTVPGPVHTATISGLKPGVDYTITVY   75 (114)
T ss_dssp             --C-CCEEEEEEEEETTEEEEEEECC-----SCCCSEEEEEEEESSCSSC-CEEEEEETTCCEEEECSCCTTCEEEEEEE
T ss_pred             CCC-CCCceEEEecCCCEEEEEEcCC-----cCcccEEEEEEEECCCCCc-cEEEEeCCCcCEEEeCCCCCCCEEEEEEE
Confidence            455 6899999999999999999987     2679999999998765432 2334455 889999999999999999999


Q ss_pred             EeeCCC---CCCC-----CCcEEeecCCCCCC
Q psy8771         794 AGTSIG---DGPS-----SYPITIRTHEDDPS  817 (904)
Q Consensus       794 a~~~~g---~g~~-----s~~~~~~t~~~~P~  817 (904)
                      |.+..|   ....     ...+.|+|....|+
T Consensus        76 A~~~~G~~~~~~~T~~~~P~~l~~~T~~~~~~  107 (114)
T 3qwq_B           76 AVTDHKPHADGPHTYHESPISINYRTEIDKPS  107 (114)
T ss_dssp             EEEEEESSTTSCCEEEEEEEEEEEECCCC---
T ss_pred             EEECCccEEEEeEcCCCCCceeEEEeccCCcc
Confidence            999888   2111     11245667666554

>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=99.09  E-value=3.3e-09  Score=105.08  Aligned_cols=174  Identities=9%  Similarity=0.063  Sum_probs=112.1

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC---CCceeecceEEEEeee--cCCeEEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP---DDKLPVGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~---~~~~~~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ..+|.|...|..  .+.+|++++|.|.+.+. .+.+.|+|+ +..+..   ........+.|.|.++  +|+|.|+|.+.
T Consensus         5 ~~kP~i~~~P~~--~v~~G~~VtL~C~~~~~-~~~~~w~k~-g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~   80 (242)
T 1p6f_A            5 LPKPFIWAEPHF--MVPKEKQVTICCQGNYG-AVEYQLHFE-GSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYR   80 (242)
T ss_dssp             CCCCEEEEESCS--EEETTCCEEEEEECCTT-CCEEEEEET-TEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEE
T ss_pred             CCCCEEEeeCCC--ccCCCCcEEEEEeeCCC-CcEEEEEEC-CCccccccccccCCcceeEEEecCCCcccCeEEEEEEe
Confidence            456888877764  78899999999999764 467999999 543321   1111235678999998  69999999998


Q ss_pred             ecCcc--eEEEEEEEEEeecCCCCCCCCCCcceEE----EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecc
Q psy8771         177 SVLGV--IETSTIVKVQCKYAPLLTLPVAPLDVKI----SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGI  250 (904)
Q Consensus       177 n~~g~--~~~~~~l~v~~~~~~~~~~P~~p~~l~~----~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~  250 (904)
                      |..+.  .+....|.|.       ..+.+|. +.+    .......++|.+...... ..|  .|...+...........
T Consensus        81 ~~~~~s~~S~~~~L~V~-------~~~~~P~-i~~~p~~~v~~G~~vtL~C~~~~~~-~~~--~w~k~g~~~~~~~~~~~  149 (242)
T 1p6f_A           81 VGELWSEPSNLLDLVVT-------EMYDTPT-LSVHPGPEVISGEKVTFYCRLDTAT-SMF--LLLKEGRSSHVQRGYGK  149 (242)
T ss_dssp             ETTEECCCCCCEEEEEE-------CCSCCCE-EEEESCSEEETTCEEEEEEECTTSC-SEE--EEEECSSSCEEEEEECS
T ss_pred             cCCccccCCcceEEEee-------cccCCCc-eEccCCCccCCCCcEEEEEecCCCC-CEE--EEEECCCccCccccCCC
Confidence            86553  2445667776       3222222 111    113456788888876433 233  34443322222222234


Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCC-CCCCCCCCeEEecC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNL-GRGPPSSPAVITTG  290 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~-g~s~~s~~~~~~t~  290 (904)
                      ....|.|.+++..+.+.|+|.|.|.. ..+..+..+.+...
T Consensus       150 ~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~  190 (242)
T 1p6f_A          150 VQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT  190 (242)
T ss_dssp             SEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEE
T ss_pred             ceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEe
Confidence            45789999999999999999999874 23445666665543

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}

Probab=99.09  E-value=1.1e-09  Score=112.88  Aligned_cols=148  Identities=11%  Similarity=0.149  Sum_probs=95.1

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCCCCc-eec------ccccccccceEEEEeeeccCCeeee-eeeeccCCCCCCCCeE
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETPNGQ-ITH------PPTRAARSHARLAAQSVLRRGRLAH-AVRQVADPVRRVPPQF  107 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~~g~-i~~------~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~v~~~~~~~~P~~  107 (904)
                      ....|.|... .+.+.++|.....  |. +..      ..+...+.....|...+...+..+. ..+.+..   ..+|.+
T Consensus       111 ~~v~l~C~~~-~p~~~v~w~~~~~--~~~~~~~~~~~~~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~---~~~p~i  184 (289)
T 3mjg_X          111 TEITIPCRVT-DPQLVVTLHEKKG--DVALPVPYDHQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQ---VSSINV  184 (289)
T ss_dssp             CCEEECCCBS-CTTSCEEEEESSC--CSCCCCCEETTTEEEECCCSSEEEEEEEETTEEEECCCEEEEECC---CCCCCC
T ss_pred             CeEEEEeEcC-CCCceEEEEeCCC--CCccceeecCCcCeeeeccCcEEEEEEEeCCceeeeeeEEEEecC---CCCCCc
Confidence            5555666554 4455666655431  11 100      0012234444455554433333332 2344332   257777


Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-Cc---e-----eecceEEEEeee--cCCeEEEEEEE
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DK---L-----PVGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~---~-----~~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ...+.+ ..+.+|+.++|.|.+.|.|.|.|.|+++ +...... ..   .     ......|.|.++  +|+|.|+|.|.
T Consensus       185 ~~~~~~-~~v~~G~~v~L~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~  262 (289)
T 3mjg_X          185 SVNAVQ-TVVRQGENITLMCIVIGNEVVNFEWTYP-RKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVT  262 (289)
T ss_dssp             EEEESC-SEEETTSCEEEEEEEESCSSBEEEEECT-TSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEE
T ss_pred             EEeCCc-ceeEcCCCEEEEEEECCCCCcceEEEcC-CccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEee
Confidence            777777 8899999999999999999999999987 3322111 11   1     113468999999  69999999999


Q ss_pred             ecCcceEEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKVQ  191 (904)
Q Consensus       177 n~~g~~~~~~~l~v~  191 (904)
                      |..|....++.|.|.
T Consensus       263 N~~G~~~~~~~l~v~  277 (289)
T 3mjg_X          263 ESVNDHQDEKAINIT  277 (289)
T ss_dssp             ETTTTEEEEEEEEEE
T ss_pred             cCCCCceeEEEEEEE
Confidence            999999999999998

>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}

Probab=99.09  E-value=9.3e-10  Score=107.36  Aligned_cols=156  Identities=11%  Similarity=0.067  Sum_probs=97.6

Q ss_pred             ecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         118 MLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       118 ~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      -.++.+.|.|.+.|. |.+.|+|+|+ +..+....++.+    +...|.|.++  +|+|.|+|.|.|..|.......|.+
T Consensus        15 c~~~~~~l~C~~~~~~p~~~i~W~~~-g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v   93 (212)
T 2r15_A           15 STAEGIQLYSFVTYYVEDLKVNWSHN-GSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSG   93 (212)
T ss_dssp             ECSSEEEEEEEBSSCCSSCEEEEEET-TEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred             EcCceEEEEEEEeccCCCceEEEEEC-CEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEE
Confidence            366778888888885 5899999999 777777666654    2246999999  6999999999998888777666654


Q ss_pred             Eee------------------cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCC----CCCCeEEee
Q psy8771         191 QCK------------------YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKA----ANTPYSEIS  248 (904)
Q Consensus       191 ~~~------------------~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~----~~~~~~~~~  248 (904)
                      ...                  ..+... ...|..+.+.  ....+.|.+...+.+...  +.|...+    ....+....
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~v~--~g~~~~l~C~~~g~p~p~--v~W~~~~~~~~~~~~~~~~~  168 (212)
T 2r15_A           94 QAYDEAYAEFQRLKQAAIAEKNRARVL-GGLPDVVTIQ--EGKALNLTCNVWGDPPPE--VSWLKNEKALAQTDHCNLKF  168 (212)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCEEE-EBCCSEEEEE--TTCCEEEEEEEECSSCCE--EEEEETTEEECCCSSEEEEE
T ss_pred             eeccchhhhccccCcccccccCCCccc-ccCCCcEEEc--cCCeEEEEEEEcCCCCce--EEEEECCeECccCCCEEEEE
Confidence            310                  000000 0122233332  233455555443322222  3343322    111222221


Q ss_pred             c-ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         249 G-IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       249 ~-~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      . .....+.|.++...+.+.|+|.|.|..|..
T Consensus       169 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~  200 (212)
T 2r15_A          169 EAGRTAYFTINGVSTADSGKYGLVVKNKYGSE  200 (212)
T ss_dssp             ETTTEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             cCCCEEEEEEcCcchHHCeEEEEEEEcCCCcE
Confidence            1 334689999999999999999999998864

>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4

Probab=99.09  E-value=7.2e-10  Score=92.42  Aligned_cols=86  Identities=17%  Similarity=0.318  Sum_probs=67.3

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      +|.+...+...+.+.+|++++|.|.+. |.|.+.|.|+|+ +...... +....++.|.|.++  +|+|.|+|.|.|..|
T Consensus         9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~-~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g   86 (98)
T 1gl4_B            9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRL-HNGKLPS-RAMDFNGILTIRNVQPSDAGTYVCTGSNMFA   86 (98)
T ss_dssp             CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEG-GGBCCCT-TEEEETTEEEECSCCGGGCEEEEEEEECSSC
T ss_pred             CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeC-CCCCCCc-eeecCCCEEEEeCCChhhCEEEEEEecCCCC
Confidence            344444333338999999999999999 799999999998 3333222 33445679999999  699999999999999


Q ss_pred             ceEEEEEEEEE
Q psy8771         181 VIETSTIVKVQ  191 (904)
Q Consensus       181 ~~~~~~~l~v~  191 (904)
                      ..+..+.|.|+
T Consensus        87 ~~~~~~~l~V~   97 (98)
T 1gl4_B           87 MDQGTATLHVQ   97 (98)
T ss_dssp             EEEEEEEEEEC
T ss_pred             ccccEEEEEEe
Confidence            98888888875

>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A

Probab=99.09  E-value=2e-09  Score=102.98  Aligned_cols=148  Identities=14%  Similarity=0.162  Sum_probs=99.7

Q ss_pred             CCCCcEEEeccCC-ceEEEEeCCCC-----CC------------CceecccccccccceEEEEeeeccCCe-eeeeeeec
Q psy8771          36 APRDVQVRPLSSS-TMVIQWDEPET-----PN------------GQITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQV   96 (904)
Q Consensus        36 ~p~~l~~~~~~~~-s~~v~W~~~~~-----~~------------g~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v   96 (904)
                      ....|.|...+.+ ...+.|.+...     .+            +.++.......+.....|...+...+. ...+.+.+
T Consensus        18 ~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v   97 (191)
T 1epf_A           18 ESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI   97 (191)
T ss_dssp             CCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEE
T ss_pred             CCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEe
Confidence            4555666665654 78999987211     11            123333344445555555555544332 22333333


Q ss_pred             cCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC--CCCceee-cceEEEEeee--cCCeEE
Q psy8771          97 ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPV-GRNVLTLDRV--TESENY  171 (904)
Q Consensus        97 ~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~-~~~~l~i~~l--~d~g~Y  171 (904)
                           ..+|.+...+.. ..+.+|+.+.|.|.+.|.|.|.|.|+++ +..+.  ...++.. .++.|.|.++  +|+|.|
T Consensus        98 -----~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y  170 (191)
T 1epf_A           98 -----FQKLMFKNAPTP-QEFKEGEDAVIVCDVVSSLPPTIIWKHK-GRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTY  170 (191)
T ss_dssp             -----ECCSEEEECCSS-EECCTTSCEEECCEEECSSCCEEEEEET-TEEGGGGCCTTEEECTTSCEEETTCCGGGCEEE
T ss_pred             -----ecCceEecCCCc-EeecCCCeEEEEEEECCCCCCEEEEEEC-CEEeeccCCceEEEecCCeEEECCCChhhCEEE
Confidence                 467888888887 8999999999999999999999999999 55543  2334443 5678999999  699999


Q ss_pred             EEEEEecCcceEEEEEEEE
Q psy8771         172 TCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       172 ~c~a~n~~g~~~~~~~l~v  190 (904)
                      +|.|.|..|.......+.|
T Consensus       171 ~C~a~n~~~~~~~~~~i~v  189 (191)
T 1epf_A          171 RCEGRILARGEINFKDIQV  189 (191)
T ss_dssp             EEEEEEGGGTEEEEEEEEE
T ss_pred             EEEEEEecceeEEEEEEEE
Confidence            9999999876555555544

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}

Probab=99.09  E-value=1.9e-10  Score=99.30  Aligned_cols=93  Identities=25%  Similarity=0.349  Sum_probs=70.2

Q ss_pred             EecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceE
Q psy8771         710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEY  788 (904)
Q Consensus       710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y  788 (904)
                      .+....|..+|.+|.+...+.+++.|+|++|.     +.+.+|.|.|+..++... .....+. ..+.++|.+|+|++.|
T Consensus        22 ~~~~~tp~~~P~~l~v~~~t~~Si~lsW~~p~-----~~i~~Y~V~y~~~~~~~~-~~~~~v~~~~t~~~l~gL~P~t~Y   95 (121)
T 2ocf_D           22 LYFQGSVSDVPTKLEVVAATPTSLLISWDAPA-----VTVRYYRITYGETGGNSP-VQEFTVPGSKSTATISGLKPGVDY   95 (121)
T ss_dssp             -------CCSCEEEEEEEECSSCEEEEEECCS-----SCCCEEEEEEEETTTCSC-BEEEEEETTCCEEEECCCCTTCEE
T ss_pred             EeeccCCCCCCCccEEEecCCCEEEEEEcCCC-----CCCcEEEEEEEECCCCCc-cEEEEeCCCcCEEEeCCCCCCCEE
Confidence            33444566689999999999999999999984     348999999998765332 2334455 8899999999999999


Q ss_pred             EEEEEEeeCCCCCCCC-CcEE
Q psy8771         789 RIWVLAGTSIGDGPSS-YPIT  808 (904)
Q Consensus       789 ~~~V~a~~~~g~g~~s-~~~~  808 (904)
                      .|+|+|.+..|.|+.| .++.
T Consensus        96 ~~~V~A~~~~G~g~~Ss~pv~  116 (121)
T 2ocf_D           96 TITVYAVTGLRLMLAGSKPIS  116 (121)
T ss_dssp             EEEEEEECCHHHHHHSCCCCE
T ss_pred             EEEEEEEeCCCccCCCCCCEE
Confidence            9999999999987764 3444

>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}

Probab=99.09  E-value=3.4e-10  Score=109.40  Aligned_cols=161  Identities=16%  Similarity=0.137  Sum_probs=99.4

Q ss_pred             CCCCceEEecCCCeEEEEE-EccCCC-CeEEEeeCCccccC--CCCc-ee-ecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         110 PPPALLEVMLDSPLNLSCV-AVGSPM-PFVKWRKGQNIELT--PDDK-LP-VGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~-~~g~p~-p~i~W~k~~~~~~~--~~~~-~~-~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      .+.. +.+.+|+.+.|.|. +.|.|. +.|.|+|+ +..+.  ...+ .. ..+++|.|.++  +|+|.|+|.+.|..+.
T Consensus        14 ~~~~-~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~   91 (201)
T 3s97_C           14 ERPE-VRVKEGKGMVLLCDPPYHFPDDLSYRWLLN-EFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSIT   91 (201)
T ss_dssp             CCCC-EEEETTCCEEECCCCCSEESSCCEEEEEES-STTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGT
T ss_pred             CCce-EEEECCCCEEEeccccccCCCceEEEEEEC-CceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCC
Confidence            3345 99999999999999 999999 99999999 54442  2222 22 35778999999  6999999999997766


Q ss_pred             eEE---EEEEEEEeecCCCCCCCCCCc------ceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeeccee
Q psy8771         182 IET---STIVKVQCKYAPLLTLPVAPL------DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT  252 (904)
Q Consensus       182 ~~~---~~~l~v~~~~~~~~~~P~~p~------~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~  252 (904)
                      ...   ...+.+...   ....+.+|.      ...+  .....++|.+...+.+..  .+.|...+.............
T Consensus        92 ~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~--~~g~~~~l~C~~~g~p~p--~v~W~~~~~~~~~~~~~~~~~  164 (201)
T 3s97_C           92 KSVFSKFIPLIPIPE---RTTKPYPADIVVQFKDVYA--LMGQNVTLECFALGNPVP--DIRWRKVLEPMPSTAEISTSG  164 (201)
T ss_dssp             EEEECCCEEEEEECC---SSCCCEEEEEEEECCCEEE--ETTCCEEEEEEEEEESCC--EEEEEETTBCCCTTCEEETTT
T ss_pred             cchhhcccceeeccc---cccCCCCCceEecCCceEE--ecCCcEEEEEEccCCCCC--ceEEEeCCCcCCCceeecCCC
Confidence            543   223333200   001111111      2222  223445665554322222  344444322111000111223


Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++...+.+.|+|.|.|..|..
T Consensus       165 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~  191 (201)
T 3s97_C          165 AVLKIFNIQLEDEGIYECEAENIRGKD  191 (201)
T ss_dssp             TEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred             CEEEEccCChhhCEEEEEEEEecCCce
Confidence            679999999999999999999998864

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1

Probab=99.08  E-value=3.9e-09  Score=104.12  Aligned_cols=186  Identities=13%  Similarity=0.169  Sum_probs=122.1

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE---e--ecCceEEEEcC--CCCCCeEE
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ---V--VDNNQLTTISD--LTPHTIYT  553 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~--L~p~t~Y~  553 (904)
                      |..+|.++.....+...+..+|++...  .....|.+.|.-..... ..|..-   .  .+....+.+..  +.....|.
T Consensus        36 ~~~~~~nl~C~~~~~~~l~CtW~~g~~--~~~t~y~l~y~~~~~~~-~~~~~C~~y~~~~g~~~~C~f~~~~~~~~~~y~  112 (247)
T 2erj_C           36 STLPLPEVQCFVFNVEYMNCTWQSSSE--PQPTNLTLHYWYKNSDN-DKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFV  112 (247)
T ss_dssp             -CCCCCCCEEEEETTSEEEEECCTTSS--SSCCCCEEEEEESSSSC-CCCEECCSEEESSSSEEEEEEEGGGCCTTSCEE
T ss_pred             CCCCCCCCEEEECCCCEEEEEEcCCCC--CCCeeEEEEEEECCCCC-CcceeCCCccccCCcceEEEeCCCCcceeeEEE
Confidence            445678899988888999999998642  22367888886543210 112111   1  12233555544  44567799


Q ss_pred             EEEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEee
Q psy8771         554 IRVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDI  632 (904)
Q Consensus       554 ~~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~  632 (904)
                      |.|++  ..|. ..+....+.... ..|.||.+|.+.......+.|+|..|..                           
T Consensus       113 i~V~~--~~g~-~~s~~~~~~~~~iVkP~PP~nl~v~~~~~~~l~l~W~~P~~---------------------------  162 (247)
T 2erj_C          113 VQLQD--PREP-RRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL---------------------------  162 (247)
T ss_dssp             EEEEC--SSCT-TCEEEEEECGGGSEECCCCEEEEEEESSSSCEEEEEECSSC---------------------------
T ss_pred             EEEEE--CCCc-cccceEEEchhHeEEeCCCCeEEEEECCCCcEEEEECCCCC---------------------------
Confidence            88864  3332 223334444332 2478899999998877899999998841                           


Q ss_pred             ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC------CCCCCCC
Q psy8771         633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG------EGATTPP  706 (904)
Q Consensus       633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G------~~~~s~~  706 (904)
                                      .....|.|+|+..++..+..........+.|.+|.|++.|.|+|++....|      .|++|.+
T Consensus       163 ----------------~~~L~Yevry~~~~~~~W~~~~~~~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~  226 (247)
T 2erj_C          163 ----------------NHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHP  226 (247)
T ss_dssp             ----------------CTTEEEEEEEECSSCSSCEEEEECSSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCC
T ss_pred             ----------------CCcEEEEEEEeeCCCCCCEEEecCCceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcC
Confidence                            234689999998766666555555567899999999999999999998542      3567777


Q ss_pred             eeEEecCCC
Q psy8771         707 IPVRTKQYV  715 (904)
Q Consensus       707 ~~~~t~~~~  715 (904)
                      +.+.+....
T Consensus       227 ~~~~t~~~~  235 (247)
T 2erj_C          227 IHWGSNTSK  235 (247)
T ss_dssp             EEECC----
T ss_pred             EEEECCCCC
Confidence            777776543

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7

Probab=99.08  E-value=7.3e-11  Score=125.11  Aligned_cols=165  Identities=15%  Similarity=0.161  Sum_probs=108.5

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc-eeecceEEEEeee--cCCe-EEEEEEEe
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-LPVGRNVLTLDRV--TESE-NYTCIAAS  177 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~-~~~~~~~l~i~~l--~d~g-~Y~c~a~n  177 (904)
                      -.+|.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+++++.......+ ....++.|.|.++  +|+| .|+|.|.|
T Consensus       156 c~~P~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n  234 (347)
T 2ifg_A          156 CGVPTLKVQVPN-ASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAEN  234 (347)
T ss_dssp             CCCCEEEEECCS-SCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEE
T ss_pred             CCCCceeccCCc-eEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEc
Confidence            458999988888 89999999999999999999999999994332221111 2236778999999  6999 99999999


Q ss_pred             cCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEE-eec---
Q psy8771         178 VLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSE-ISG---  249 (904)
Q Consensus       178 ~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~-~~~---  249 (904)
                      ..|..+..+.|.|..       +|..  .+ ........+++.+...+.+..  .|.|...+.    ...... ...   
T Consensus       235 ~~g~~~~~~~l~V~~-------~P~i--~~-~~~~~g~~v~l~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~  302 (347)
T 2ifg_A          235 DVGRAEVSVQVNVSF-------PASV--QL-HTAVEMHHWCIPFSVDGQPAP--SLRWLFNGSVLNETSFIFTEFLEPAA  302 (347)
T ss_dssp             TTEECCEEECCCCBE-------EEEE--EE-CCCEESSSEEEEEEEEEESCC--EEEEEETTEECCCCSSEEEEECCCCT
T ss_pred             CCCCEEEEEEEEEcC-------CCee--ee-ccCccCceEEEEEEeeecCCC--cEEEEeCCEECCCCcceeeEEEeecC
Confidence            999887777777762       1110  00 001112344444443322222  223332211    111110 001   


Q ss_pred             ---ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         250 ---IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       250 ---~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                         .....+.|.++...+.+.|+|.|.|..|..
T Consensus       303 ~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~  335 (347)
T 2ifg_A          303 NETVRHGCLRLNQPTHVNNGNYTLLAANPFGQA  335 (347)
T ss_dssp             TCCCEEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             CCcccceEEEECCCCcccCceEEEEEecCCCce
Confidence               224669999999999999999999998864

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}

Probab=99.08  E-value=4.6e-10  Score=93.00  Aligned_cols=83  Identities=20%  Similarity=0.271  Sum_probs=68.7

Q ss_pred             CCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCC-CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT-PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       199 ~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      +.+.+|.+|++...+.+++.|+|.++.+.+.+|.|.|...++.. ..........+.++|.+|+|++.|.|+|+|.|..|
T Consensus         3 t~~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~~~G   82 (97)
T 3qht_C            3 SVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYY   82 (97)
T ss_dssp             --CCSSSSCEEEEEETTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEET
T ss_pred             CCCCCCCceEEEecCCCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCc
Confidence            57889999999999999999999999889999999999865442 22223344568899999999999999999999999


Q ss_pred             CCCC
Q psy8771         278 RGPP  281 (904)
Q Consensus       278 ~s~~  281 (904)
                      .+..
T Consensus        83 ~gp~   86 (97)
T 3qht_C           83 DLYY   86 (97)
T ss_dssp             TEEE
T ss_pred             cCCC
Confidence            8753

>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A

Probab=99.08  E-value=8.2e-10  Score=92.43  Aligned_cols=84  Identities=21%  Similarity=0.263  Sum_probs=70.5

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..+|.|...+.+.+.+.+|+.+.|.|.+. .|.+.|.|+|+ +..+..+.++.+.    ...|.|.++  +|+|.|+|.|
T Consensus         5 ~~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~-g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a   82 (100)
T 2yuv_A            5 SSGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKN-GQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA   82 (100)
T ss_dssp             SSSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEES-SCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE
T ss_pred             CCCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEEC-CEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE
Confidence            45788988888657889999999999999 79999999999 7777666666542    236999999  6999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                          |.....+.|.|.
T Consensus        83 ----g~~~~~~~l~V~   94 (100)
T 2yuv_A           83 ----GDEKCSTELFVR   94 (100)
T ss_dssp             ----TTEEEEEEEEEC
T ss_pred             ----CCceEEEEEEEe
Confidence                777888889888

>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.08  E-value=3.1e-10  Score=96.28  Aligned_cols=85  Identities=16%  Similarity=0.294  Sum_probs=71.1

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..||.|...+.+ +.+.+|+.+.|.|.+.|.|.+ |.|+|+ +..+....++.+.    ...|.|.++  +|+|.|+|.|
T Consensus         6 ~~~p~~~~~~~~-~~v~~G~~v~l~C~~~~~~~~-v~W~k~-g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a   82 (106)
T 2dlt_A            6 SGQLEVLQDIAD-LTVKAAEQAVFKCEVSDEKVT-GKWYKN-GVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVP   82 (106)
T ss_dssp             CCCCCEEECCCC-EEEESSCCEECCCEESCSSCE-EEEEES-SCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEE
T ss_pred             CCCCEEecCCCC-eEEeCCCeEEEEEEEcCCCcc-eEEEcC-CEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEE
Confidence            568899999998 999999999999999999988 999999 7777666666542    248999999  6999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                      .|.  ..+..+.|.|.
T Consensus        83 ~n~--~~~~~~~l~V~   96 (106)
T 2dlt_A           83 DGY--ALSLSAKLNFL   96 (106)
T ss_dssp             ETS--CCCCCBCEEEE
T ss_pred             ccC--CceEEEEEEEE
Confidence            997  44566667776

>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}

Probab=99.08  E-value=9.6e-10  Score=94.51  Aligned_cols=82  Identities=22%  Similarity=0.374  Sum_probs=69.5

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec-ce---EEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG-RN---VLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-~~---~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..||.|...+.+ +.+.+|+++.|.|.+.|.  |.|.|+|+ +..+..+.++.+. ++   .|.|.++  +|+|.|+|.|
T Consensus        17 ~~pp~~~~~~~~-~~v~~G~~v~l~C~~~~~--p~v~W~k~-~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a   92 (113)
T 2edh_A           17 ALPIKFTEGLRN-EEATEGATAVLRCELSKM--APVEWWKG-HETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC   92 (113)
T ss_dssp             CSCCCEEECCCC-CEECTTSCEEEEEEESSC--CCCEEEES-SSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE
T ss_pred             cCCCcccccCCc-eEEeCCCeEEEEEEECCC--CcEEEEEC-CEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe
Confidence            356799888888 899999999999999886  67999999 7777777777652 33   7999999  6999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                          |.....+.|.|.
T Consensus        93 ----~~~~~~~~l~V~  104 (113)
T 2edh_A           93 ----GKERTSAMLTVR  104 (113)
T ss_dssp             ----TTEEEEEEEEEC
T ss_pred             ----CCCCEEEEEEEe
Confidence                778888889988

>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}

Probab=99.08  E-value=3.4e-10  Score=93.75  Aligned_cols=77  Identities=23%  Similarity=0.411  Sum_probs=68.2

Q ss_pred             CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771         111 PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      |.+ +.+.+|+.+.|.|.+.|  .|.|.|+|+ +..+....++...++.|.|.++  +|+|.|+|.|.|..|.....+.|
T Consensus         8 p~~-~~v~~G~~~~l~C~~~~--~p~v~W~k~-g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l   83 (95)
T 4hwu_A            8 PEA-YVVAPGESLELQCMLKD--AAVISWTKD-GVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWIFMV   83 (95)
T ss_dssp             CEE-EEECTTSCEEEECCCCT--TCEEEEEET-TEEECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred             CCc-EEECCCCEEEEEEEeCC--CCEEEEEEC-CEECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCcEEEEEEE
Confidence            445 88999999999999998  479999999 7778777788888889999999  69999999999999988888888


Q ss_pred             EEE
Q psy8771         189 KVQ  191 (904)
Q Consensus       189 ~v~  191 (904)
                      .|.
T Consensus        84 ~V~   86 (95)
T 4hwu_A           84 NVT   86 (95)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            887

>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A

Probab=99.08  E-value=5.1e-10  Score=109.22  Aligned_cols=149  Identities=19%  Similarity=0.393  Sum_probs=100.7

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCC----------------CCCceecccc-----cccccceEEEEeeeccCCee--eee
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPET----------------PNGQITHPPT-----RAARSHARLAAQSVLRRGRL--AHA   92 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~----------------~~g~i~~~~~-----~~~~~~~~~~~~~~~~~g~~--~~~   92 (904)
                      ....|.|...+.+.+.+.|.+...                .+|.+....+     ...+.....|...+.. |..  ..+
T Consensus        25 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~-g~~~~~~~  103 (212)
T 2v9r_A           25 EPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYL-GEAVSHDA  103 (212)
T ss_dssp             CCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETT-EEEECCCE
T ss_pred             CcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCC-Cceeecce
Confidence            566666666667788999976521                1233221111     2334444444444332 322  233


Q ss_pred             eeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCC-CCceeecceEEEEeee--cCC
Q psy8771          93 VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTP-DDKLPVGRNVLTLDRV--TES  168 (904)
Q Consensus        93 ~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~-~~~~~~~~~~l~i~~l--~d~  168 (904)
                      .+.+.    ..+|.+...+.. ..+..|+.+.|.|.+ .|.|.+.|.|+++ +..+.. ..++...++.|.|.++  +|+
T Consensus       104 ~l~V~----~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~v~W~~~-~~~l~~~~~~~~~~~~~L~i~~~~~~d~  177 (212)
T 2v9r_A          104 SLEVA----ILRDDFRQNPSD-VMVAVGEPAVMECQPPRGHPEPTISWKKD-GSPLDDKDERITIRGGKLMITYTRKSDA  177 (212)
T ss_dssp             EEEEC----EECSSCSBCCCC-EEEETTSCEEEECBCCCEESCCEEEEEET-TEEECTTSTTEEEETTEEEESSCCGGGC
T ss_pred             EEEEE----eccccceeCCCc-eEecCCCcEEEEEecCCCCCCCEEEEEEC-CccCCCCcceEEccCCeEEEeeCCHhhC
Confidence            44443    224455566666 899999999999999 8999999999999 655544 4566677889999999  699


Q ss_pred             eEEEEEEEecCcceEE-EEEEEEE
Q psy8771         169 ENYTCIAASVLGVIET-STIVKVQ  191 (904)
Q Consensus       169 g~Y~c~a~n~~g~~~~-~~~l~v~  191 (904)
                      |.|+|.|.|..|...+ .+.|.|.
T Consensus       178 G~Y~C~a~N~~g~~~s~~~~l~V~  201 (212)
T 2v9r_A          178 GKYVCVGTNMVGERESEVAELTVL  201 (212)
T ss_dssp             EEEEEEEEETTEEEECCCEEEEEE
T ss_pred             eeEEEEEecccCceecceEEEEEE
Confidence            9999999999998665 4788888

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}

Probab=99.07  E-value=5.9e-10  Score=92.36  Aligned_cols=82  Identities=18%  Similarity=0.261  Sum_probs=68.6

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc-c-ceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA-K-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSP  697 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~  697 (904)
                      .+.+|.+|++.+++.+++.|+|.++   .+.+.+|.|.|+..++.. . ........++++|.+|+|++.|.|+|+|++.
T Consensus         4 ~~~~P~~l~v~~~t~~Si~lsW~~p---~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~~   80 (97)
T 3qht_C            4 VSSVPTKLEVVAATPTSLLISWDAS---SSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYS   80 (97)
T ss_dssp             -CCSSSSCEEEEEETTEEEEECCCC---CSSCCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred             CCCCCCceEEEecCCCEEEEEEeCC---CCCCCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence            4679999999999999999999985   468999999999876553 2 2334456789999999999999999999999


Q ss_pred             CCCCCCC
Q psy8771         698 RGEGATT  704 (904)
Q Consensus       698 ~G~~~~s  704 (904)
                      .|.|+.+
T Consensus        81 ~G~gp~s   87 (97)
T 3qht_C           81 YYDLYYS   87 (97)
T ss_dssp             ETTEEEE
T ss_pred             CccCCCC
Confidence            9998643

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1.2e-09  Score=91.74  Aligned_cols=83  Identities=17%  Similarity=0.240  Sum_probs=65.4

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      .++.+|.+|++..++.++|.|+|.+|..    +.+|+|+|+.........+........ ++.|.+|.|++.|.|+|+|+
T Consensus         7 ~~~~~P~~l~~~~~~~~sv~lsW~~p~~----~~~Y~v~y~~~~~~~~~~~~~~~~~~~-~~~l~~L~p~t~Y~~~V~A~   81 (104)
T 2dkm_A            7 GPLPPPRALTLAAVTPRTVHLTWQPSAG----ATHYLVRCSPASPKGEEEEREVQVGRP-EVLLDGLEPGRDYEVSVQSL   81 (104)
T ss_dssp             CSCCCCCCCEEEEECSSEEEEECCCCSS----CSEEEEEEEESSSCCSSCCEEEEESSS-EEEEESCCTTCCEEEEEEEE
T ss_pred             CCCCCCceeEEEecCCCEEEEEEeCCCC----CCeEEEEEEECCCCCCcceEEEecCCC-EEEECCCCCCCEEEEEEEEE
Confidence            4567899999999999999999998753    389999999876432223334444444 89999999999999999999


Q ss_pred             eCCCCCCC
Q psy8771         560 TSVGPGPL  567 (904)
Q Consensus       560 ~~~g~~~~  567 (904)
                      |..|.+..
T Consensus        82 ~~~~~s~p   89 (104)
T 2dkm_A           82 RGPEGSEA   89 (104)
T ss_dssp             CSSSBCCC
T ss_pred             CCCCCCCC
Confidence            98876543

>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}

Probab=99.07  E-value=2.1e-09  Score=110.76  Aligned_cols=240  Identities=11%  Similarity=0.134  Sum_probs=121.2

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--c---ceEEEEeee--cCCeEEEEEEEecC
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--G---RNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~---~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      |.....+ +.+.+|++++|.|.+.|.    |+|+|+ +..+..  ++..  .   .+.|.|.++  +|+|.|+|.|.|..
T Consensus         3 i~~~~~~-~~v~~G~~v~L~C~~~~~----v~W~~~-~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~   74 (289)
T 3mjg_X            3 VTPPGPE-LVLNVSSTFVLTCSGSAP----VVWERM-SQEPPQ--EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSR   74 (289)
T ss_dssp             BCSSCSE-EECCTTCCEEEEEEESSC----CEEEBT-TBCCSE--EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC--
T ss_pred             ecCCCCe-EEEeCCCcEEEEEeccce----EEEECC-CCCccc--ceeccCCCceeEEEEEccCChhhCEEEEEEEcccC
Confidence            3333344 889999999999999986    999999 555532  2221  1   368999998  69999999999988


Q ss_pred             cc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEc
Q psy8771         180 GV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR  258 (904)
Q Consensus       180 g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~  258 (904)
                      |. ......+.+..........+..+....+.......+.|.+... .+.....+.+...  +.......... ..+.  
T Consensus        75 g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~--~~~~~~~~~~~-~~~~--  148 (289)
T 3mjg_X           75 GLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKG--DVALPVPYDHQ-RGFS--  148 (289)
T ss_dssp             ----CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSC--CSCCCCCEETT-TEEE--
T ss_pred             CCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCC--CCccceeecCC-cCee--
Confidence            76 2233344444211111111111121112233445677777665 2222333444321  11111111111 1121  


Q ss_pred             CCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCC---CCC----------ceEecccCCCeeEEEecCCCCCCce-
Q psy8771         259 NLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGT---APR----------DVQVRPLSSSTMVIQWDEPETPNGQ-  324 (904)
Q Consensus       259 ~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~---~p~----------~l~~~~~~~~~v~l~W~~p~~~~~~-  324 (904)
                        .+.+.+.|+|.|.|..+... +....+......++.   .|.          .|.+...+.....+.|.......+. 
T Consensus       149 --~~~d~G~Y~C~a~n~~~~~~-s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~  225 (289)
T 3mjg_X          149 --GIFEDRSYICKTTIGDREVD-SDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRL  225 (289)
T ss_dssp             --ECCCSSEEEEEEEETTEEEE-CCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCC
T ss_pred             --eeccCcEEEEEEEeCCceee-eeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCc
Confidence              24577899999998765432 222233222211111   011          1222222333445566533221111 


Q ss_pred             eeEEEEEe----eceeEEEEEcCCCCCcEEEEEEEEEcCCCCC
Q psy8771         325 ITAKHHRR----IGLVETYSLTGLYPNTLYYIWLAAQSPRGEG  363 (904)
Q Consensus       325 ~~~~~~~~----~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~  363 (904)
                      +.......    ......+.|..+.....-.+.+.|.|..|..
T Consensus       226 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~  268 (289)
T 3mjg_X          226 VEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDH  268 (289)
T ss_dssp             CCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTE
T ss_pred             ccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCc
Confidence            11000110    1234578899999888888999999988864

>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}

Probab=99.07  E-value=2.5e-10  Score=91.12  Aligned_cols=71  Identities=23%  Similarity=0.365  Sum_probs=59.0

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      +.+.+|+++.|.|.+.| |.|.|+|+|+ |..+..+.++.+    ....|.|.++  +|+|.|+|.|.|    ...++.|
T Consensus         6 v~~~~G~~v~l~C~vs~-p~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~l   79 (84)
T 2lu7_A            6 VRSTPGGDLELVVHLSG-PGGPVRWYKD-GERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIFLV   79 (84)
T ss_dssp             EEECTTSCEEEECCCSC-CSTTCEEEET-TEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEEEE
T ss_pred             EEEecCCCEEEEEEECC-CCcEEEEEEC-CEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEEEE
Confidence            89999999999999977 8899999999 888877777664    2347999999  699999999844    4566777


Q ss_pred             EEE
Q psy8771         189 KVQ  191 (904)
Q Consensus       189 ~v~  191 (904)
                      .|.
T Consensus        80 ~V~   82 (84)
T 2lu7_A           80 SVE   82 (84)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            776

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1

Probab=99.07  E-value=9.9e-10  Score=93.91  Aligned_cols=84  Identities=26%  Similarity=0.415  Sum_probs=62.0

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-------------cCceEEEEcCC
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-------------DNNQLTTISDL  546 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~L  546 (904)
                      .||.+|.   +..++.+++.|+|.+|.+.++.|.+|.|+|+....  ...|.....             ...+.+.+.+|
T Consensus         4 ~pP~~P~---v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L   78 (115)
T 2ic2_A            4 YPPTPPN---VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGK--RKNWQTTNDNIPYGKPKWNSELGKSFTASVTDL   78 (115)
T ss_dssp             CCCCCCE---EEECC---EEEEEEEECCSSCCEEEEEEEEEECC-----CCEEEEEEEECCSCSCSSSSEEEEEEEECSC
T ss_pred             CCCCcCE---eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCC--CCCceECcccccccccccccccCceeEEEeCCC
Confidence            4556775   67889999999999998777889999999998732  245654322             22357899999


Q ss_pred             CCCCeEEEEEEEEeCCCCCCCC
Q psy8771         547 TPHTIYTIRVQAFTSVGPGPLS  568 (904)
Q Consensus       547 ~p~t~Y~~~V~a~~~~g~~~~S  568 (904)
                      .|++.|.|+|+|+|..|.+..|
T Consensus        79 ~p~t~Y~FRV~A~N~~G~~~pS  100 (115)
T 2ic2_A           79 KPQHTYRFRILAVYSNNDNKES  100 (115)
T ss_dssp             CSSEEEEEEEEEEETTSCEEEC
T ss_pred             CCCCEEEEEEEEEeCCCCCCCC
Confidence            9999999999999999975444

>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1

Probab=99.07  E-value=5.2e-11  Score=104.15  Aligned_cols=89  Identities=19%  Similarity=0.295  Sum_probs=74.1

Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCC--CCceee-----c---ceEEEEeee--c
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTP--DDKLPV-----G---RNVLTLDRV--T  166 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~--~~~~~~-----~---~~~l~i~~l--~  166 (904)
                      .+..||.|.. +.. +.+.+|+.+.|.|.+.|.|.|. |.|+++ +..+..  ..++.+     .   ...|.|.++  +
T Consensus        10 ~V~~~P~i~~-~~~-~~~~~G~~v~l~C~~~g~P~p~~i~W~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~   86 (122)
T 2cry_A           10 TVNGPPIISS-TQT-QHALHGEKGQIKCFIRSTPPPDRIAWSWK-ENVLESGTSGRYTVETISTEEGVISTLTISNIVRA   86 (122)
T ss_dssp             CCCSSCCEEE-ECC-CCCCTTSCCCCCEEECCSSCCSEEEEESS-SCEECSEEETTEEEEEEEETTEEEEEEECTTCCHH
T ss_pred             EEecCCCccC-CCe-EEEecCCCEEEEEEEeecCCCcEeEEEEC-CEEccCCCCCCEEEEEecCCCceEEEEEEcCCChh
Confidence            3578899988 766 8999999999999999999997 999999 666654  345544     2   338999999  5


Q ss_pred             CC-eEEEEEEEecCcceEEEEEEEEE
Q psy8771         167 ES-ENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       167 d~-g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |. |.|+|.|.|..|.....+.|.|.
T Consensus        87 D~~G~Y~C~a~N~~G~~~~~~~l~V~  112 (122)
T 2cry_A           87 DFQTIYNCTAWNSFGSDTEIIRLKEQ  112 (122)
T ss_dssp             HHHSCEEEEEECSSCEEEEEECCCCS
T ss_pred             hCCceEEEEEECCCCeEEEEEEEEEC
Confidence            88 99999999999999988888877

>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=1.6e-10  Score=97.04  Aligned_cols=84  Identities=19%  Similarity=0.329  Sum_probs=68.1

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC----ceee--c--ceEEEEeee--cCCeE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD----KLPV--G--RNVLTLDRV--TESEN  170 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~----~~~~--~--~~~l~i~~l--~d~g~  170 (904)
                      ...||.|...+.+ +.+.+|+.+.|.|.+.|.| +.|.|+|+ +..+....    ++.+  +  ...|.|.++  +|+|.
T Consensus         5 ~~~p~~~~~~~~~-~~v~~G~~v~l~C~~~~~~-~~v~W~k~-g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~   81 (101)
T 2edk_A            5 SSGPVLIVTPLED-QQVFVGDRVEMAVEVSEEG-AQVMWMKN-GVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGR   81 (101)
T ss_dssp             CCCCCCEEECCCC-EEEESSCCCBCCEEESCSS-CCCEEEES-SCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSB
T ss_pred             ccCCCEEEecCCc-eEEcCCCCEEEEEEEeCCC-CEEEEEEC-CEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEE
Confidence            3567889998888 9999999999999999999 99999999 76666554    3343  2  246999998  79999


Q ss_pred             EEEEEEecCcceEEEEEEEEE
Q psy8771         171 YTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       171 Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |+|.|.|    ....+.|.|.
T Consensus        82 Y~C~a~n----~~~~~~l~V~   98 (101)
T 2edk_A           82 YQVITNG----GQCEAELIVE   98 (101)
T ss_dssp             EEEECSS----CEECCBEEEE
T ss_pred             EEEEEcC----CcEEEEEEEe
Confidence            9999987    3456677777

>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}

Probab=99.07  E-value=7.2e-10  Score=91.69  Aligned_cols=83  Identities=25%  Similarity=0.420  Sum_probs=68.3

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..+|.|...|.+ +.+.+|+++.|.|.+ +.|.+.|.|+|+ +..+..+.++.+.    ...|.|.++  +|+|.|+|.|
T Consensus         6 ~~~~~~~~~~~~-~~v~~G~~v~l~C~~-~~p~~~v~W~k~-~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a   82 (95)
T 2k1m_A            6 KPVSAFSKKPRS-VEVAAGSPAVFEAET-ERAGVKVRWQRG-GSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA   82 (95)
T ss_dssp             CCCCCCSBCCCC-EEEETTSCEEEEEEC-SSSSCCCEEECS-SSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred             CCCCeeEeCCCc-EEEeCCCcEEEEEEe-CCCCCeEEEEEC-CEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence            445778888888 999999999999999 889999999999 7777666565542    247999999  6999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                          |.....+.|.|.
T Consensus        83 ----g~~~~~~~l~V~   94 (95)
T 2k1m_A           83 ----GSSKVKFDLKVI   94 (95)
T ss_dssp             ----TTEEEEEEEEEE
T ss_pred             ----CCceEEEEEEEe
Confidence                667777888775

>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A

Probab=99.06  E-value=5.8e-09  Score=100.55  Aligned_cols=157  Identities=10%  Similarity=0.092  Sum_probs=100.2

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc---ee--ecceEEEEeee--cCCeEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK---LP--VGRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~---~~--~~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ..+|.|...|.  ..+.+|++++|.|.+.+ |.+.+.|+|+ +..+....+   +.  ..++.|.|.++  +|+|.|+|.
T Consensus         6 ~~~P~i~~~p~--~~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~   81 (201)
T 1nkr_A            6 HRKPSLLAHPG--PLVKSEETVILQCWSDV-MFEHFLLHRE-GMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCY   81 (201)
T ss_dssp             -CCCEEEEESC--SEEETTCCEEEEEEESS-CCSEEEEEEE-SSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEE
T ss_pred             CCCCeEEEEcC--CccCCCCcEEEEEeccC-CCCEEEEEEC-CCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEe
Confidence            45778887775  67889999999999985 7789999999 544422111   11  24678999998  699999999


Q ss_pred             EEecCc-----ceEEEEEEEEEeecCCCCCCCCCCcceEE----EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE
Q psy8771         175 AASVLG-----VIETSTIVKVQCKYAPLLTLPVAPLDVKI----SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS  245 (904)
Q Consensus       175 a~n~~g-----~~~~~~~l~v~~~~~~~~~~P~~p~~l~~----~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~  245 (904)
                      |.|..+     ..+..+.|.|.       ..+.+|. +.+    .......++|.+...... ..  +.|...+......
T Consensus        82 a~~~~~~~~~~~~s~~~~l~V~-------~~~~~p~-i~~~p~~~v~~G~~v~L~C~~~~~~-~~--~~w~k~g~~~~~~  150 (201)
T 1nkr_A           82 GSVTHSPYQVSAPSDPLDIVII-------GLYEKPS-LSAQPGPTVLAGENVTLSCSSRSSY-DM--YHLSREGEAHERR  150 (201)
T ss_dssp             EEBTTBTTCCCCCCCCEEEEEE-------CSSCCCE-EEEESCSEECTTCEEEEEEEESSCC-SE--EEEEETTCSSCEE
T ss_pred             EecCCCCccccCCCCCEEEEee-------ccCCCCc-eecCCCCccCCCCeEEEEEeCCCCC-ce--EEEEECCcccCcc
Confidence            987532     23455677777       3322332 111    112346788888765432 33  3344443322211


Q ss_pred             E-----eecceeceEEEcCCCCCCeEEEEEEEEcC
Q psy8771         246 E-----ISGIITTYYTVRNLSPYTEYEFYIIAVNN  275 (904)
Q Consensus       246 ~-----~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~  275 (904)
                      .     ..+.....|.|.+++  +.+.|+|.|.+.
T Consensus       151 ~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~  183 (201)
T 1nkr_A          151 LPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH  183 (201)
T ss_dssp             EECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred             cccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence            1     111225679999998  899999999875

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}

Probab=99.06  E-value=5.4e-10  Score=92.56  Aligned_cols=82  Identities=20%  Similarity=0.366  Sum_probs=67.7

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-cc-cceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KA-KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP  697 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~-~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~  697 (904)
                      +.++|.+|.+.+++.+++.|+|.++.   +.+.+|.|.|+..+. .. .........+++.|.+|+|++.|.|+|+|++.
T Consensus         1 ~lp~P~~l~v~~~t~~Sv~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~   77 (98)
T 3tes_A            1 MLPAPKNLVVSEVTEDSLRLSWTAPD---AAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKG   77 (98)
T ss_dssp             CBCCCEEEEEESCCSSCEEEEEECCT---TSCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCCCceEEEecCCCeEEEEecCCc---CccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeC
Confidence            35789999999999999999999864   478999999998763 22 23334456789999999999999999999999


Q ss_pred             CCCCCCC
Q psy8771         698 RGEGATT  704 (904)
Q Consensus       698 ~G~~~~s  704 (904)
                      .|.|.+.
T Consensus        78 ~g~S~p~   84 (98)
T 3tes_A           78 GHRSNPL   84 (98)
T ss_dssp             TEEBCCE
T ss_pred             CcccCCE
Confidence            8876553

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.1e-09  Score=91.98  Aligned_cols=89  Identities=19%  Similarity=0.366  Sum_probs=68.3

Q ss_pred             CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCc-cEEEEecCcceEEecCCCCCceEEEEEEE
Q psy8771         716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE-ASIVTLKNQTSFVLDELKKWTEYRIWVLA  794 (904)
Q Consensus       716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a  794 (904)
                      +..+|.+|++..++.++|.|+|++|.     + +.+|.|+|+..+...+. .....+... .++|.+|+|++.|.|+|+|
T Consensus         8 ~~~~P~~l~~~~~~~~sv~lsW~~p~-----~-~~~Y~v~y~~~~~~~~~~~~~~~~~~~-~~~l~~L~p~t~Y~~~V~A   80 (104)
T 2dkm_A            8 PLPPPRALTLAAVTPRTVHLTWQPSA-----G-ATHYLVRCSPASPKGEEEEREVQVGRP-EVLLDGLEPGRDYEVSVQS   80 (104)
T ss_dssp             SCCCCCCCEEEEECSSEEEEECCCCS-----S-CSEEEEEEEESSSCCSSCCEEEEESSS-EEEEESCCTTCCEEEEEEE
T ss_pred             CCCCCceeEEEecCCCEEEEEEeCCC-----C-CCeEEEEEEECCCCCCcceEEEecCCC-EEEECCCCCCCEEEEEEEE
Confidence            44478999999999999999999884     2 38999999987653321 233334333 9999999999999999999


Q ss_pred             eeCCCCCCCCCcEEeecC
Q psy8771         795 GTSIGDGPSSYPITIRTH  812 (904)
Q Consensus       795 ~~~~g~g~~s~~~~~~t~  812 (904)
                      .+..|.+.... +.++|.
T Consensus        81 ~~~~~~s~p~~-~~~~T~   97 (104)
T 2dkm_A           81 LRGPEGSEARG-IRARTP   97 (104)
T ss_dssp             ECSSSBCCCEE-EECCCC
T ss_pred             ECCCCCCCCEE-EEEEcC
Confidence            99888776543 556676

>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.5e-09  Score=91.27  Aligned_cols=83  Identities=13%  Similarity=0.139  Sum_probs=69.0

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC----------ceeec-c---eEEEEeee--
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD----------KLPVG-R---NVLTLDRV--  165 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~----------~~~~~-~---~~l~i~~l--  165 (904)
                      ..+|.|...+.+ +.+.+|+++.|+|.+.+  .|.+.|+|| |..+..+.          |+.+. +   .+|.|.++  
T Consensus         6 ~p~~~~~~~l~d-~~v~eG~~a~f~C~vs~--~p~v~W~kn-G~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~   81 (112)
T 2e6q_A            6 SGTARLVAGLED-VQVYDGEDAVFSLDLST--IIQGTWFLN-GEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKH   81 (112)
T ss_dssp             CSCCCEEECCCC-EEEETTCEEEEEEEESS--CCCCEEEES-SCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCS
T ss_pred             cCCcEEecCCCC-eEEcCCCcEEEEEEECC--CCeEEEEEC-CEECccCcccccccccccEEEEEeCCcEEEEEECCCCH
Confidence            345789999999 99999999999999998  778999999 88887776          77763 2   38999999  


Q ss_pred             cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         166 TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +|+|.|+|..-   +...+++.|.|.
T Consensus        82 ~D~G~Y~~~~~---~~~~ssA~L~V~  104 (112)
T 2e6q_A           82 QDSGALVGFSC---PGVQDSAALTIQ  104 (112)
T ss_dssp             TTCSEEEEEEE---TTEEEEEEEEEE
T ss_pred             HHCccEEEEEE---CCeeEEEEEEEe
Confidence            79999977443   345678999999

>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7

Probab=99.06  E-value=1.7e-10  Score=122.38  Aligned_cols=145  Identities=12%  Similarity=0.077  Sum_probs=101.3

Q ss_pred             CCCCCcEEEeccCCceEEEEeCCCCC------------CCceecccccccccc-eEEEEeeeccCCeeeeeeeeccCCCC
Q psy8771          35 TAPRDVQVRPLSSSTMVIQWDEPETP------------NGQITHPPTRAARSH-ARLAAQSVLRRGRLAHAVRQVADPVR  101 (904)
Q Consensus        35 ~~p~~l~~~~~~~~s~~v~W~~~~~~------------~g~i~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~v~~~~~  101 (904)
                      +....|.|...+.+.+.|.|.++...            ++.+........+.+ ...|...+..+.....+.+.     +
T Consensus       173 G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~-----V  247 (347)
T 2ifg_A          173 GDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVN-----V  247 (347)
T ss_dssp             TCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCC-----C
T ss_pred             CCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEE-----E
Confidence            45667778877888899999876432            222333334444555 55555444432222222333     3


Q ss_pred             CCCCeE-EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----------cceEEEEeee--cC
Q psy8771         102 RVPPQF-SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----------GRNVLTLDRV--TE  167 (904)
Q Consensus       102 ~~~P~~-~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----------~~~~l~i~~l--~d  167 (904)
                      ..+|.+ .      ..+.+|+.++|.|.+.|.|.|.|+|+|+ +..+....+...           .++.|.|.++  +|
T Consensus       248 ~~~P~i~~------~~~~~g~~v~l~C~~~g~P~p~i~W~~~-g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d  320 (347)
T 2ifg_A          248 SFPASVQL------HTAVEMHHWCIPFSVDGQPAPSLRWLFN-GSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVN  320 (347)
T ss_dssp             BEEEEEEE------CCCEESSSEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGG
T ss_pred             cCCCeeee------ccCccCceEEEEEEeeecCCCcEEEEeC-CEECCCCcceeeEEEeecCCCcccceEEEECCCCccc
Confidence            567775 2      3345799999999999999999999999 777765544332           2567999998  69


Q ss_pred             CeEEEEEEEecCcceEEEEEEEEE
Q psy8771         168 SENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +|.|+|.|.|..|..+.++.|.|.
T Consensus       321 ~G~Y~C~a~N~~G~~~~~~~l~V~  344 (347)
T 2ifg_A          321 NGNYTLLAANPFGQASASIMAAFM  344 (347)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECSC
T ss_pred             CceEEEEEecCCCceeeEEEEEec
Confidence            999999999999999988888876

>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}

Probab=99.06  E-value=1.3e-09  Score=104.97  Aligned_cols=150  Identities=16%  Similarity=0.236  Sum_probs=101.1

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC-----------CC---ceecccccccccceEEEEeeeccCCeeeeeeeeccCCCC
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP-----------NG---QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVR  101 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~-----------~g---~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~  101 (904)
                      ....|.|...+.+...+.|.+....           +|   .+........+.....|...+..........+.+.    
T Consensus        23 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~----   98 (197)
T 3lcy_A           23 EAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQ----   98 (197)
T ss_dssp             SEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEE----
T ss_pred             CcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEE----
Confidence            5566677666677789999775311           11   23333333444444445544333333334444432    


Q ss_pred             CCCCeEEcC--CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee---cCCeEEE
Q psy8771         102 RVPPQFSIP--PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV---TESENYT  172 (904)
Q Consensus       102 ~~~P~~~~~--~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l---~d~g~Y~  172 (904)
                       .+|.+...  ......+..|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+.    ...|.|.++   +|+|.|+
T Consensus        99 -~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~  176 (197)
T 3lcy_A           99 -ATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHG-QKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYK  176 (197)
T ss_dssp             -EEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEE
T ss_pred             -cCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeEC-CEECCCCCceEEEEcCCEEEEEEccccchhhCceEE
Confidence             23333321  12227888999999999999999999999999 7777776666542    268999998   4899999


Q ss_pred             EEEEecCcceEEEEEEEEE
Q psy8771         173 CIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~  191 (904)
                      |.|.|..|..+..+.|.|.
T Consensus       177 C~a~n~~g~~~~~~~l~V~  195 (197)
T 3lcy_A          177 VQLSNVFGTVDAILDVEIQ  195 (197)
T ss_dssp             EEEECSSCEEEEEEEEEEE
T ss_pred             EEEEcCcCceEEEEEEEEe
Confidence            9999999999999888887

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.06  E-value=7.1e-10  Score=91.43  Aligned_cols=88  Identities=19%  Similarity=0.304  Sum_probs=69.8

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR  698 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~  698 (904)
                      ..+|.+|++..++.+++.|+|.++.   +.+.+|.|.|+..+....  .....+..++++|.+|.|++.|.|+|+|++..
T Consensus         2 l~~P~~l~~~~~~~~si~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~   78 (94)
T 1j8k_A            2 IDRPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDD   78 (94)
T ss_dssp             CCCCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSS
T ss_pred             CCCCCccEEEeecCCEEEEEEcCCC---CCcceEEEEEEeCCCCCceEEecCCCCccEEEeCCCCCCCEEEEEEEEEcCC
Confidence            4689999999999999999999875   679999999998764322  11223456799999999999999999999999


Q ss_pred             CCCCCCCCeeEEec
Q psy8771         699 GEGATTPPIPVRTK  712 (904)
Q Consensus       699 G~~~~s~~~~~~t~  712 (904)
                      |.|.++ ...+.|.
T Consensus        79 g~s~p~-~~~~~T~   91 (94)
T 1j8k_A           79 MESQPL-IGTQSTA   91 (94)
T ss_dssp             CCCCCE-EEEEECC
T ss_pred             CcCCCE-EeEEEec
Confidence            988765 3444443

>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=3.2e-10  Score=95.87  Aligned_cols=90  Identities=20%  Similarity=0.296  Sum_probs=70.1

Q ss_pred             CCCCeEEcCCCCc--eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEE
Q psy8771         102 RVPPQFSIPPPAL--LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       102 ~~~P~~~~~~~~~--~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c  173 (904)
                      ..||.+...|...  +.+.+|+.++|.|.+.|.|.+ |.|+|+ +..+....++.+    ....|.|.++  +|+|.|+|
T Consensus         5 ~~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~-g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C   82 (104)
T 2e6p_A            5 SSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKD-GQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFEC   82 (104)
T ss_dssp             CSSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEET-TEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEE
T ss_pred             CCCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeC-CEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEE
Confidence            3466666666653  688999999999999999999 999999 777766555553    2357999999  69999999


Q ss_pred             EEEecCcceEEEEEEEEEeecCCCCCCCCCC
Q psy8771         174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAP  204 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p  204 (904)
                      .|.|..+    .+.|.|.       .+|.+|
T Consensus        83 ~a~n~~~----~~~l~V~-------~~P~pp  102 (104)
T 2e6p_A           83 RTEGVSA----FFGVTVQ-------DPSGPS  102 (104)
T ss_dssp             ECSSCCC----CEEEEEE-------CCCCSS
T ss_pred             EECCceE----EEEEEEc-------CCCCCc
Confidence            9998744    5677887       566555

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}

Probab=99.05  E-value=1.8e-10  Score=100.13  Aligned_cols=96  Identities=26%  Similarity=0.323  Sum_probs=78.1

Q ss_pred             cceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC----CccceEEEEEEEeCCCCCCeEEe-ecceece
Q psy8771         180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAANTPYSEI-SGIITTY  254 (904)
Q Consensus       180 g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~----~~~~~~y~v~~~~~~~~~~~~~~-~~~~~~~  254 (904)
                      |..++.+.|.+.       ..|.+|.++++...+.+++.|+|.++    +.++.+|.|+++..+. ..|..+ .....+.
T Consensus         4 G~~~~~~~v~~~-------~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~   75 (120)
T 2yux_A            4 GSSGASIDIQII-------DRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKS-MEWFTVIEHYHRTS   75 (120)
T ss_dssp             CCCCCCCCCCCC-------CCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTT-CCCEEEESSCCSSC
T ss_pred             CcccEEEEEEee-------cCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCC-CceEEeeecCCcCE
Confidence            555555556665       89999999999999999999999998    2568999999998654 344443 3455688


Q ss_pred             EEEcCCCCCCeEEEEEEEEcCCCCCCCCC
Q psy8771         255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSS  283 (904)
Q Consensus       255 ~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~  283 (904)
                      +++.+|.|++.|.|+|+|.|..|.+.++.
T Consensus        76 ~~v~~L~p~t~Y~frV~A~n~~G~s~~S~  104 (120)
T 2yux_A           76 ATITELVIGNEYYFRVFSENMCGLSEDAT  104 (120)
T ss_dssp             CEECCCCSSEEEEEEECCCSSSCSCSSCE
T ss_pred             EEECCCCCCCEEEEEEEEeeCCcCCCCcc
Confidence            99999999999999999999999987765

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.05  E-value=1.8e-09  Score=94.57  Aligned_cols=95  Identities=21%  Similarity=0.315  Sum_probs=75.2

Q ss_pred             CCCCCCC-CeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCC--------CCCcceEEEeecCceEEEEcCCCCCC
Q psy8771         480 EPGTAPR-DVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQS--------LPMSAWETQVVDNNQLTTISDLTPHT  550 (904)
Q Consensus       480 ~p~~~p~-~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~L~p~t  550 (904)
                      ..|.+|. ++.+...+.+++.|+|++|.+.+  +.+|.|.|+....        .....|........+.+++.+|.|++
T Consensus        14 ~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g--~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~gL~p~t   91 (127)
T 2dmk_A           14 TAPNPPSIREELCTASHDTITVHWISDDEFS--ISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSGT   91 (127)
T ss_dssp             SSCCCCEEEEEEEEEETTEEEEEEECSCCSS--EEEEEEEEEEESCCSCHHHHHHTGGGSEEEEEECSSEEEEESCCSSC
T ss_pred             CCCcCCCCCCEEEeeeCCEEEEEECCCCCCC--ccceEEEEEEecccccccccccCCCCcEEeecccCCeEEECCCCCCC
Confidence            3457888 89999999999999999987643  7889999886211        01145766554567789999999999


Q ss_pred             eEEEEEEEEeCCCCCCCCCcEEEecCC
Q psy8771         551 IYTIRVQAFTSVGPGPLSAPVLVKTQQ  577 (904)
Q Consensus       551 ~Y~~~V~a~~~~g~~~~S~~~~~~t~~  577 (904)
                      .|.|+|+|+|..|. ..|..+.+.|..
T Consensus        92 ~Y~frV~A~N~~G~-~~S~~v~~~T~~  117 (127)
T 2dmk_A           92 RYIFIVKAINQAGS-RNSEPTRLKTNS  117 (127)
T ss_dssp             EEEEEEEEEESSCE-EECCCEEEECCS
T ss_pred             EEEEEEEEEeCCCC-CCCcCeEeEeCC
Confidence            99999999999998 578888888753

>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*

Probab=99.05  E-value=1.7e-09  Score=105.40  Aligned_cols=124  Identities=19%  Similarity=0.176  Sum_probs=80.2

Q ss_pred             eecccccccccceEEEEeeeccCCeeee-eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCC--CeEEEe
Q psy8771          64 ITHPPTRAARSHARLAAQSVLRRGRLAH-AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPM--PFVKWR  140 (904)
Q Consensus        64 i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~  140 (904)
                      ++.......|.....|...+.+....+. ..+.+..   ..+|.+...+...+.+.+|+.++|.|.+.|.|.  +.|.|+
T Consensus        66 l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~---~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~  142 (213)
T 2x1w_L           66 FTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVG---YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWE  142 (213)
T ss_dssp             EEEEGGGTTTCSEEEEEEC----CEECCCEEEEECB---CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEE
T ss_pred             EEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeC---CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEE
Confidence            3333344455555556555432222222 3344421   345555555554369999999999999999664  579999


Q ss_pred             eCCccccCCCCc-e-----------eecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         141 KGQNIELTPDDK-L-----------PVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       141 k~~~~~~~~~~~-~-----------~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      ++ +..+..... .           ......|.|.++  +|+|.|+|.|.|..|..++.+.|.|.
T Consensus       143 ~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~  206 (213)
T 2x1w_L          143 YP-SSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH  206 (213)
T ss_dssp             CS-CSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred             ec-CCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEe
Confidence            98 444322111 0           122447999999  69999999999999999999999998

>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X

Probab=99.05  E-value=5.4e-10  Score=109.23  Aligned_cols=122  Identities=13%  Similarity=0.073  Sum_probs=82.5

Q ss_pred             eecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeC
Q psy8771          64 ITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKG  142 (904)
Q Consensus        64 i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~  142 (904)
                      +....+...|.....|...+........+.+.|     ..+|.+...+.. ..+.+|+.++|.|.+ .|.|.|.|.|+|+
T Consensus        86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V-----~~~p~~~~~~~~-~~~~~g~~v~l~C~~~~g~p~~~v~W~~~  159 (214)
T 3jz7_A           86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTV-----LVKPSGTRCFVD-GSEEIGNDFKLKCEPKEGSLPLQFEWQKL  159 (214)
T ss_dssp             EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE-----ECCCBSCEEEEE-SCCBTTCCEEEEEECSBCCSSCEEEEEEC
T ss_pred             EEEccCChhhCeEEEEEEEeCCCccccEEEEEE-----EcCCCCceeeee-cceecCCcEEEEecCCCCCCCCEEEEEEC
Confidence            333334444555555555443332333444554     334444333333 457899999999999 8999999999996


Q ss_pred             C-ccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         143 Q-NIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       143 ~-~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      + +..+....+....++.|.|.++  +|+|.|+|.|.|..|..+..+.|.|.
T Consensus       160 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~  211 (214)
T 3jz7_A          160 SDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV  211 (214)
T ss_dssp             STTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred             CCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence            3 3333333334446779999999  69999999999999999888888776

>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}

Probab=99.05  E-value=3.6e-09  Score=106.55  Aligned_cols=168  Identities=14%  Similarity=0.164  Sum_probs=99.2

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc-------------CCCCceee------cceEEEEee
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL-------------TPDDKLPV------GRNVLTLDR  164 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~-------------~~~~~~~~------~~~~l~i~~  164 (904)
                      ..+...|.. +.+.+|++++|.|.+.+.|.+.|.|+|.. +..+             ....|+.+      ...+|.|.+
T Consensus         4 ~~v~q~p~~-~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~   82 (256)
T 3tf7_C            4 QSVTQPDAR-VTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKAS   82 (256)
T ss_dssp             CEEECSCSE-EEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESS
T ss_pred             cEEEecCce-EEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECC
Confidence            346666666 99999999999999999999999999831 1110             11233332      345799999


Q ss_pred             e--cCCeEEEEEEEecCcc----eEEEEEEEEEee----------------cCCCCCCCCCCcceEEEeecCCeEEEEEe
Q psy8771         165 V--TESENYTCIAASVLGV----IETSTIVKVQCK----------------YAPLLTLPVAPLDVKISEVTATSVRLDWT  222 (904)
Q Consensus       165 l--~d~g~Y~c~a~n~~g~----~~~~~~l~v~~~----------------~~~~~~~P~~p~~l~~~~~~~~sv~l~W~  222 (904)
                      +  +|+|.|.|.+.|..+.    ....+.|.|...                ..........|..+.+.  ...+++|.+.
T Consensus        83 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~--~G~~v~L~C~  160 (256)
T 3tf7_C           83 VHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTV--TGENVTLSCR  160 (256)
T ss_dssp             CCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEE--TTCCEEECEE
T ss_pred             CCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEe--CCCcEEEEEE
Confidence            9  7999999999997652    223456676620                00000111123333222  2344555555


Q ss_pred             CCCccceEEEEEEEeCCCCC---------------------CeEEe-ecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         223 YPSETLLYYVIQYKPKAANT---------------------PYSEI-SGIITTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       223 ~~~~~~~~y~v~~~~~~~~~---------------------~~~~~-~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      ..+.. .  .+.|.....+.                     .+... .......|.|.++++.+.+.|.|.|.|..|.
T Consensus       161 ~~~~~-~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~  235 (256)
T 3tf7_C          161 QTNSH-N--YMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQ  235 (256)
T ss_dssp             ECSCC-S--EEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred             cCCCc-e--EEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence            43221 1  12222111111                     11111 1223457999999999999999999997663

>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=3.2e-10  Score=97.79  Aligned_cols=83  Identities=17%  Similarity=0.181  Sum_probs=70.0

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec-----ceEEEEeee--cCCeEEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG-----RNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-----~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      .|+.|...+.+ +.+.+|+.++|.|.+.|.|.|.|.|+|+ +..+..+.++.+.     ...|.|.++  +|+|.|+|. 
T Consensus        12 ~p~~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~-   88 (115)
T 2cr6_A           12 RRVHIIEDLED-VDVQEGSSATFRCRISPANYEPVHWFLD-KTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE-   88 (115)
T ss_dssp             SCCEEEECCCE-EEEETTSCEECCCEEESTTCCSCEEEES-SCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEE-
T ss_pred             CCCeEeccCcc-EEEeCCCcEEEEEEEcCCCCCccEEEEC-CEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEE-
Confidence            34588888888 9999999999999999999999999999 7777666655432     347999999  699999999 


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                         .|.....+.|.|.
T Consensus        89 ---~g~~~~~~~L~V~  101 (115)
T 2cr6_A           89 ---AGDQRASAALRVT  101 (115)
T ss_dssp             ---ETTEECCEEEEEE
T ss_pred             ---ECCeeEEEEEEEE
Confidence               3777888899998

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1

Probab=99.04  E-value=1.5e-09  Score=92.70  Aligned_cols=85  Identities=22%  Similarity=0.302  Sum_probs=59.7

Q ss_pred             EEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEc-cCCCCccEEEEe----------c-CcceEEecCCCCCceEEEEE
Q psy8771         725 CEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVET-GRSDSEASIVTL----------K-NQTSFVLDELKKWTEYRIWV  792 (904)
Q Consensus       725 ~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~-~~~~~~~~~~~~----------~-~~~~~~i~~L~p~t~Y~~~V  792 (904)
                      +..++.+++.|+|.+|.  ..+.+|.+|.|+|+.. ....|.......          . ..+.+++.+|.|++.|.|||
T Consensus        11 v~~~~~~sv~L~W~~P~--~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV   88 (115)
T 2ic2_A           11 VTRLSDESVMLRWMVPR--NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRI   88 (115)
T ss_dssp             EEECC---EEEEEEEEC--CSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEE
T ss_pred             eEEEeCCEEEEEEcCCC--CCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCCCEEEEEE
Confidence            77889999999999995  3447899999999987 333342222222          1 34678999999999999999


Q ss_pred             EEeeCCCCC---CCCCcEEeec
Q psy8771         793 LAGTSIGDG---PSSYPITIRT  811 (904)
Q Consensus       793 ~a~~~~g~g---~~s~~~~~~t  811 (904)
                      +|.|..|.|   ..|..+.+++
T Consensus        89 ~A~N~~G~~~pS~~S~~~~~~~  110 (115)
T 2ic2_A           89 LAVYSNNDNKESNTSAKFYLQP  110 (115)
T ss_dssp             EEEETTSCEEECCCCCCEEECC
T ss_pred             EEEeCCCCCCCCCCCCCEEeCC
Confidence            999999975   4455555544

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*

Probab=99.04  E-value=4.8e-10  Score=95.51  Aligned_cols=77  Identities=23%  Similarity=0.362  Sum_probs=64.6

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc--cceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA--KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP  697 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~  697 (904)
                      .|.+|.+|.+.+.+.+++.|+|.++   .+.+.+|.|.|+..++..  .........++++|.+|.|++.|.|+|+|++.
T Consensus         3 vP~~P~~L~v~~~t~~Sv~lsW~~p---~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~~~   79 (114)
T 3qwq_B            3 VSDVPRDLEVVAATPTSLLISWDSG---RGSYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAVTD   79 (114)
T ss_dssp             --CCCEEEEEEEEETTEEEEEEECC---SCCCSEEEEEEEESSCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred             CCCCCCceEEEecCCCEEEEEEcCC---cCcccEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEEC
Confidence            4789999999999999999999985   468999999999876643  22334456789999999999999999999999


Q ss_pred             CC
Q psy8771         698 RG  699 (904)
Q Consensus       698 ~G  699 (904)
                      .|
T Consensus        80 ~G   81 (114)
T 3qwq_B           80 HK   81 (114)
T ss_dssp             EE
T ss_pred             Cc
Confidence            88

>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A

Probab=99.04  E-value=1.1e-09  Score=98.02  Aligned_cols=82  Identities=21%  Similarity=0.402  Sum_probs=64.6

Q ss_pred             CCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC----------Cceee-------cceEEE
Q psy8771          99 PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD----------DKLPV-------GRNVLT  161 (904)
Q Consensus        99 ~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~----------~~~~~-------~~~~l~  161 (904)
                      +....||.|...|.+ +.+.+|+++.|.|.+.|.|.|.|.|+|+ +..+...          .++..       ..+.|.
T Consensus        16 ~~~~~pP~~~~~p~~-~~v~~G~~v~L~C~~~g~P~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~   93 (137)
T 3qr2_A           16 PRGSHMAGFVQAPLS-QQRWVGGSVELHCEAVGSPVPEIQWWFE-GQGPNDICSQLWDGARLDRVHIHATYHQHAASTIS   93 (137)
T ss_dssp             -----CCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEEE-ESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEE
T ss_pred             CCCCCCCeEEcCCCC-EEEeCCCCEEEEEEEeeecCCeEEEEEC-CCCccccceeecccCcccceEEecccccccceEEE
Confidence            345789999999998 9999999999999999999999999998 5444321          12222       356899


Q ss_pred             Eeee--cCCeEEEEEEEecCcce
Q psy8771         162 LDRV--TESENYTCIAASVLGVI  182 (904)
Q Consensus       162 i~~l--~d~g~Y~c~a~n~~g~~  182 (904)
                      |.++  +|+|.|+|.|.|..|..
T Consensus        94 I~~v~~~D~G~Y~C~a~N~~G~~  116 (137)
T 3qr2_A           94 IDTLVEEDTGTYECRASNDPDRN  116 (137)
T ss_dssp             ECSCCGGGCEEEEEEEECCTTSS
T ss_pred             ECCCCcccCEEEEEEEEecCCcc
Confidence            9999  69999999999999975

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.03  E-value=1.5e-09  Score=95.05  Aligned_cols=93  Identities=18%  Similarity=0.221  Sum_probs=74.4

Q ss_pred             ccCCCCCc-ceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCC-----------ccccceEEecccceEEEeCCCCC
Q psy8771         618 NDTYAKPR-DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY-----------AKAKHHRRIGLVETYSLTGLYPN  685 (904)
Q Consensus       618 ~~~~~~p~-~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~-----------~~~~~~~~~~~~~~~~l~~L~p~  685 (904)
                      .+.|.+|. ++.+..++.++++|+|.++..++  +.+|.+.|....           ...+........+.+++.+|+|+
T Consensus        13 ~~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g--~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~gL~p~   90 (127)
T 2dmk_A           13 LTAPNPPSIREELCTASHDTITVHWISDDEFS--ISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSG   90 (127)
T ss_dssp             CSSCCCCEEEEEEEEEETTEEEEEEECSCCSS--EEEEEEEEEEESCCSCHHHHHHTGGGSEEEEEECSSEEEEESCCSS
T ss_pred             cCCCcCCCCCCEEEeeeCCEEEEEECCCCCCC--ccceEEEEEEecccccccccccCCCCcEEeecccCCeEEECCCCCC
Confidence            34678899 99999999999999999987543  889999998621           12233333345679999999999


Q ss_pred             cEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771         686 TLYYIWLAAQSPRGEGATTPPIPVRTKQ  713 (904)
Q Consensus       686 t~Y~v~V~a~~~~G~~~~s~~~~~~t~~  713 (904)
                      +.|.|+|+|+|..|. .+|..+.++|..
T Consensus        91 t~Y~frV~A~N~~G~-~~S~~v~~~T~~  117 (127)
T 2dmk_A           91 TRYIFIVKAINQAGS-RNSEPTRLKTNS  117 (127)
T ss_dssp             CEEEEEEEEEESSCE-EECCCEEEECCS
T ss_pred             CEEEEEEEEEeCCCC-CCCcCeEeEeCC
Confidence            999999999999999 577888888864

>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1

Probab=99.03  E-value=1.1e-08  Score=112.42  Aligned_cols=199  Identities=17%  Similarity=0.151  Sum_probs=106.2

Q ss_pred             ccccccceEEEEeeeccCCe-eeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCC-eEEEeeCCcc
Q psy8771          69 TRAARSHARLAAQSVLRRGR-LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMP-FVKWRKGQNI  145 (904)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p-~i~W~k~~~~  145 (904)
                      +...|...+.|...+..... .....+.+..  ...+|.+...+.. ..+.+|+.+.|.|.+.| .|.+ .|+|+|+ +.
T Consensus        82 v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~--~~~~P~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~-g~  157 (438)
T 1qgc_4           82 VEADDVATYYCQQSNEVPLTFGAGTKLDLKR--ADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKID-GS  157 (438)
T ss_dssp             CCGGGCEEEEEEECSSTTCCBCCCEEEEECC--CCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCEEEEEEET-TE
T ss_pred             CcCcCCeeEEEEEecCCCccccCceeEEecC--CCCCCEEEecCCC-hhhccCCceEEEEEEccccCCCcEEEEEEC-CE
Confidence            34445445555554433211 1123334321  2357777664443 34457889999999998 7777 8999999 66


Q ss_pred             ccCCCCce--e---------ecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEee
Q psy8771         146 ELTPDDKL--P---------VGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEV  212 (904)
Q Consensus       146 ~~~~~~~~--~---------~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~  212 (904)
                      .+......  .         .....|.|.++  +|+|.|+|.|.|..|.......+...  ..+. .. ..|....+.  
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~--~~~~-~~-~~~~~~~v~--  231 (438)
T 1qgc_4          158 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN--ECEV-ML-VESGGGLVK--  231 (438)
T ss_dssp             EECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETT--C-CC-EE-EEECCEEEC--
T ss_pred             EcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccc--ccee-EE-ecCCceEEe--
Confidence            66544111  0         11347899888  69999999999988875332222211  0000 00 012222222  


Q ss_pred             cCCeEEEEEeCCCccceEEEEEEEeC--CC---------------------CCCeEEee--cceeceEEEcCCCCCCeEE
Q psy8771         213 TATSVRLDWTYPSETLLYYVIQYKPK--AA---------------------NTPYSEIS--GIITTYYTVRNLSPYTEYE  267 (904)
Q Consensus       213 ~~~sv~l~W~~~~~~~~~y~v~~~~~--~~---------------------~~~~~~~~--~~~~~~~~i~~L~p~~~Y~  267 (904)
                      ....++|.+...+.+.....|.|...  +.                     ...+....  ......|.|.++++.+.+.
T Consensus       232 ~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~  311 (438)
T 1qgc_4          232 PGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAM  311 (438)
T ss_dssp             TTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCE
T ss_pred             cCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEE
Confidence            22334444443222111111222211  00                     11222111  1224589999999999999


Q ss_pred             EEEEEEcCCC
Q psy8771         268 FYIIAVNNLG  277 (904)
Q Consensus       268 ~~v~a~n~~g  277 (904)
                      |+|.|.|..+
T Consensus       312 Y~C~a~n~~~  321 (438)
T 1qgc_4          312 YYCVRREDGG  321 (438)
T ss_dssp             EEEEECCSSS
T ss_pred             EEEEEEccCC
Confidence            9999999554

>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A

Probab=99.03  E-value=9.3e-10  Score=102.98  Aligned_cols=152  Identities=11%  Similarity=0.191  Sum_probs=99.9

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      .|.|...|.. ..+.+|+.+.|.|.+.|.| .+.+.|+|+ +..+...      ...+.|.++  +|+|.|+|.+.|..+
T Consensus         4 ~p~i~~~p~~-~~v~~G~~v~l~C~~~~~p~~~~~~W~~~-g~~~~~~------~~~~~~~~~~~~d~G~Y~C~~~~~~~   75 (170)
T 3ry4_A            4 KAVLKLEPPW-INVLQEDSVTLTCQGARSPESDSIQWFHN-GNLIPTH------TQPSYRFKANNNDSGEYTCQTGQTSL   75 (170)
T ss_dssp             BCEEEEESCC-SEEETTCEEEEEEESCCCSSSSCEEEEET-TEECTTC------CSSEEEEECCGGGCEEEEEEETTSBC
T ss_pred             CCEEEeCCCC-eEEECCCcEEEEEEecCCCCcceEEEEEC-CeEcccC------ccceEEEecccccCeEEEEEEeCCCc
Confidence            4567777776 8899999999999999997 579999999 6665442      345667777  799999999997544


Q ss_pred             ceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCCCCCCeEEeecceeceEEEcC
Q psy8771         181 VIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRN  259 (904)
Q Consensus       181 ~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~  259 (904)
                        +....|.|..  .+...  .+| ...+  .....+.|.+... +.+.  ..+.|...+  ....  .......+.|.+
T Consensus        76 --s~~~~l~v~~--~~~~~--~~~-~~~~--~~g~~~~l~C~~~~~~p~--~~~~W~~~g--~~~~--~~~~~~~L~i~~  140 (170)
T 3ry4_A           76 --SDPVHLTVLF--EWLVL--QTP-HLEF--QEGETIMLRCHSWKDKPL--VKVTFFQNG--KSQK--FSHLDPTFSIPQ  140 (170)
T ss_dssp             --CCCEEEEEEC--CSEEE--ECS-CSEE--CTTCCEEEEEEEGGGCCE--EEEEEEETT--EEEE--EESSCCEEEESS
T ss_pred             --eEeEEEEEEC--CceEe--cCC-Ccee--ecCCeEEEEEECCCCCCC--ceEEEEECC--eEcc--ccCCCCeEEEEe
Confidence              3456666661  11000  111 2222  2234566666653 2222  334454432  1111  122346799999


Q ss_pred             CCCCCeEEEEEEEEcCCCC
Q psy8771         260 LSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       260 L~p~~~Y~~~v~a~n~~g~  278 (904)
                      +...+.+.|+|.|.|..|.
T Consensus       141 v~~~d~G~Y~C~a~n~~g~  159 (170)
T 3ry4_A          141 ANHSHSGDYHCTGNIGYTL  159 (170)
T ss_dssp             CCGGGCEEEEEEEEETTEE
T ss_pred             ccccCCEEEEEEEEeCcCc
Confidence            9999999999999998874

>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A

Probab=99.03  E-value=1.3e-08  Score=100.36  Aligned_cols=158  Identities=13%  Similarity=0.130  Sum_probs=86.8

Q ss_pred             CCceEEecCCCeEEEEEEccCCCC---eEEEeeCCcccc----------------CCCCceee-------cceEEEEeee
Q psy8771         112 PALLEVMLDSPLNLSCVAVGSPMP---FVKWRKGQNIEL----------------TPDDKLPV-------GRNVLTLDRV  165 (904)
Q Consensus       112 ~~~~~~~~g~~~~l~C~~~g~p~p---~i~W~k~~~~~~----------------~~~~~~~~-------~~~~l~i~~l  165 (904)
                      .+.+.+.+|++++|.|.+.+.+.+   .|.|+|++....                ....|+..       ++.+|.|.++
T Consensus        11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v   90 (226)
T 4f80_A           11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV   90 (226)
T ss_dssp             SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred             CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence            333899999999999999987765   699999732110                01122221       3458999999


Q ss_pred             --cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCc-cceEEEEEEEeCCCCC
Q psy8771         166 --TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE-TLLYYVIQYKPKAANT  242 (904)
Q Consensus       166 --~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~-~~~~y~v~~~~~~~~~  242 (904)
                        +|+|.|+|.|.|..|..+....+.+.       ..+..+ ...........+.+.+...+. +..  .|.|...++..
T Consensus        91 ~~~D~G~Y~C~a~n~~~~~~~~v~~~~~-------~~~~~~-~~~~~~~~g~~v~l~c~~~g~~P~p--~i~W~k~~~~~  160 (226)
T 4f80_A           91 TASDSGKYLCYFQDGDFYEKALVELKVA-------ALGSDL-HVDVKGYKDGGIHLECRSTGWYPQP--QIQWSNNKGEN  160 (226)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEEEEEE-------BCCCCC-EEEEEEEETTEEEEEEEEEEEBSCC--EEEEECTTSCB
T ss_pred             chHHCeeEEEEEECCCcEEEEEEEEeec-------cceecc-cceeeeccCCceeeEEEeccCCCCC--EEEEEECCceE
Confidence              69999999999988877666555554       222111 111222233444444443211 111  34444322110


Q ss_pred             -CeEE---eec--ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         243 -PYSE---ISG--IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       243 -~~~~---~~~--~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                       ....   ...  .......+..+++.+.+.|+|.|.|..|..
T Consensus       161 ~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~  203 (226)
T 4f80_A          161 IPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGL  203 (226)
T ss_dssp             CCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTE
T ss_pred             cCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCe
Confidence             0000   111  111122334567888999999999998854

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1

Probab=99.02  E-value=1.1e-08  Score=100.84  Aligned_cols=186  Identities=11%  Similarity=0.121  Sum_probs=116.2

Q ss_pred             CCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEe
Q psy8771         581 SQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWND  660 (904)
Q Consensus       581 ~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~  660 (904)
                      .+|.++.+...+...+..+|.+...                                           .....|.+.|+-
T Consensus        38 ~~~~nl~C~~~~~~~l~CtW~~g~~-------------------------------------------~~~t~y~l~y~~   74 (247)
T 2erj_C           38 LPLPEVQCFVFNVEYMNCTWQSSSE-------------------------------------------PQPTNLTLHYWY   74 (247)
T ss_dssp             CCCCCCEEEEETTSEEEEECCTTSS-------------------------------------------SSCCCCEEEEEE
T ss_pred             CCCCCCEEEECCCCEEEEEEcCCCC-------------------------------------------CCCeeEEEEEEE
Confidence            3677888888788888999987631                                           113456666654


Q ss_pred             CCcc--cc--c--eEE-ecccceEEEe--CCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCC
Q psy8771         661 TYAK--AK--H--HRR-IGLVETYSLT--GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSST  731 (904)
Q Consensus       661 ~~~~--~~--~--~~~-~~~~~~~~l~--~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~  731 (904)
                      .+..  .+  .  ... .+....+.+.  .+.....|.|.|++  ..|.. .+....+.....+.+.||.+|++......
T Consensus        75 ~~~~~~~~~~C~~y~~~~g~~~~C~f~~~~~~~~~~y~i~V~~--~~g~~-~s~~~~~~~~~iVkP~PP~nl~v~~~~~~  151 (247)
T 2erj_C           75 KNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD--PREPR-RQATQMLKLQNLVIPWAPENLTLHKLSES  151 (247)
T ss_dssp             SSSSCCCCEECCSEEESSSSEEEEEEEGGGCCTTSCEEEEEEC--SSCTT-CEEEEEECGGGSEECCCCEEEEEEESSSS
T ss_pred             CCCCCCcceeCCCccccCCcceEEEeCCCCcceeeEEEEEEEE--CCCcc-ccceEEEchhHeEEeCCCCeEEEEECCCC
Confidence            3221  11  0  011 1222345554  34456789888864  33321 12233344344443447899999988778


Q ss_pred             EEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCC------CCCCCC
Q psy8771         732 SIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIG------DGPSSY  805 (904)
Q Consensus       732 ~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g------~g~~s~  805 (904)
                      .+.|+|+.|..    .....|+|+|+...+..+  ........+.+.|.+|.|++.|.|+|||....|      .|++|+
T Consensus       152 ~l~l~W~~P~~----~~~L~Yevry~~~~~~~W--~~~~~~~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~  225 (247)
T 2erj_C          152 QLELNWNNRFL----NHCLEHLVQYRTDWDHSW--TEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSH  225 (247)
T ss_dssp             CEEEEEECSSC----CTTEEEEEEEECSSCSSC--EEEEECSSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCC
T ss_pred             cEEEEECCCCC----CCcEEEEEEEeeCCCCCC--EEEecCCceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCc
Confidence            99999999842    234589999998655444  333333678999999999999999999998542      467888


Q ss_pred             cEEeecCCCCCCC
Q psy8771         806 PITIRTHEDDPSE  818 (904)
Q Consensus       806 ~~~~~t~~~~P~~  818 (904)
                      ++.+.+.+..+.+
T Consensus       226 ~~~~~t~~~~~~~  238 (247)
T 2erj_C          226 PIHWGSNTSKENP  238 (247)
T ss_dssp             CEEECC-------
T ss_pred             CEEEECCCCCCCC
Confidence            8998887665543

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}

Probab=99.02  E-value=9e-10  Score=95.68  Aligned_cols=87  Identities=21%  Similarity=0.355  Sum_probs=72.9

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCC-CceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPN-GQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~  557 (904)
                      .+|.+|.++.+...+.+++.|+|++|...+ +.+.+|.|+|+....   ..|.... ....+.+.+.+|.|++.|.|+|+
T Consensus        16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~---~~w~~~~~~~~~~~~~v~~L~p~t~Y~frV~   92 (120)
T 2yux_A           16 DRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKS---MEWFTVIEHYHRTSATITELVIGNEYYFRVF   92 (120)
T ss_dssp             CCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTT---CCCEEEESSCCSSCCEECCCCSSEEEEEEEC
T ss_pred             cCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCC---CceEEeeecCCcCEEEECCCCCCCEEEEEEE
Confidence            355889999999999999999999987665 479999999998753   4565543 24567789999999999999999


Q ss_pred             EEeCCCCCCCCC
Q psy8771         558 AFTSVGPGPLSA  569 (904)
Q Consensus       558 a~~~~g~~~~S~  569 (904)
                      |.|..|.|.+|.
T Consensus        93 A~n~~G~s~~S~  104 (120)
T 2yux_A           93 SENMCGLSEDAT  104 (120)
T ss_dssp             CCSSSCSCSSCE
T ss_pred             EeeCCcCCCCcc
Confidence            999999988775

>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A

Probab=99.02  E-value=3.3e-10  Score=107.64  Aligned_cols=149  Identities=13%  Similarity=0.113  Sum_probs=95.1

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEee-e--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDR-V--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~-l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      .....|+++.|.|.+.| |.+ |+|+|+ +..+...     .+++|.|.+ +  +|+|.|+|.|.|..|.......+.|.
T Consensus         9 ~v~~~G~~v~L~C~~~~-~~~-i~W~k~-g~~l~~~-----~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~   80 (186)
T 1jbj_A            9 KVSISGTSVELTCPLDS-DEN-LKWEKN-GQELPQK-----HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVG   80 (186)
T ss_dssp             EEEEETTEEEEECSSCC-CTT-CEEEET-TEEECSC-----CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCC
T ss_pred             EEEeCCcEEEEEEeCCC-CCc-eEEEEC-CEECCCC-----CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence            45578999999999998 544 999999 6666542     456899999 7  79999999999999985555555444


Q ss_pred             eecCCCC----------------CCCCCCc--ceEEE-eecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeeccee
Q psy8771         192 CKYAPLL----------------TLPVAPL--DVKIS-EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT  252 (904)
Q Consensus       192 ~~~~~~~----------------~~P~~p~--~l~~~-~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~  252 (904)
                      ....+..                .....+.  .+.+. ......+.|.+..|..     .|.|...+..  .. ......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~p~p-----~i~W~k~g~~--i~-~~~~~~  152 (186)
T 1jbj_A           81 SADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLTDK-----TIKWLKDGSI--IS-PLNATK  152 (186)
T ss_dssp             SCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSSSCS-----CEEEEETTEE--CC-CSSCCS
T ss_pred             cccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeCCCC-----eEEEEECCEE--Cc-ccCCCc
Confidence            2111100                0000000  01111 1145677888876422     2444443211  10 011234


Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++.+.+.+.|+|.|.|..|..
T Consensus       153 ~~L~i~~v~~~D~G~Y~C~a~N~~g~~  179 (186)
T 1jbj_A          153 NTWNLGNNAKDPRGTYQCQGAKETSNP  179 (186)
T ss_dssp             SCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred             ceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence            678999999999999999999988753

>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}

Probab=99.02  E-value=2.1e-09  Score=111.00  Aligned_cols=239  Identities=13%  Similarity=0.073  Sum_probs=133.1

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEEe
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      ..||.|...+.+ +.+.+|++++|.|.+.|.    |.|+++ +..   ..++..  ..+.|.|.++  +|+|.|+|.|.|
T Consensus         2 ~~~P~i~~~~~~-~~v~~G~~v~L~C~~~~~----v~W~~~-~~~---~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n   72 (292)
T 4dkd_C            2 GSIPVIEPSVPE-LVVKPGATVTLRCVGNGS----VEWDGP-PSP---HWTLYSDGSSSILSTNNATFQNTGTYRCTEPG   72 (292)
T ss_dssp             --CCEEESCCSS-CEECTTCCEEEEEECSSC----CCBCCC-CCS---SCEECCBTTEEEEEESSCCGGGCSCEEECCCC
T ss_pred             CCCceecCCCCe-EEEcCCCcEEEEEcCCCc----eEEccC-CCC---ceEEeccCceEEEEEcccccccCEEEEEEEcc
Confidence            358899988888 899999999999999995    999987 321   112222  3468999999  699999999999


Q ss_pred             cCcceEEEEEEEEEeecCCCCCCCC----CCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeC-CCCC-CeEEeecce
Q psy8771         178 VLGVIETSTIVKVQCKYAPLLTLPV----APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPK-AANT-PYSEISGII  251 (904)
Q Consensus       178 ~~g~~~~~~~l~v~~~~~~~~~~P~----~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~-~~~~-~~~~~~~~~  251 (904)
                      ..|..+..+.|.|.       .+|.    .+..+.+.  ....+.|.+...+... .-.+.|... +... .........
T Consensus        73 ~~~~~~~~~~l~V~-------~~~~~~~~~~~~~~v~--~g~~v~l~C~~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~  142 (292)
T 4dkd_C           73 DPLGGSAAIHLYVK-------DPARPWNVLAQEVVVF--EDQDALLPCLLTDPVL-EAGVSLVRVRGRPLMRHTNYSFSP  142 (292)
T ss_dssp             ----CCEEECCEEC-------CSSCCEEESCSEEEEE--TTSCEECCEEESSGGG-GSSEEEEEGGGCCCCSSCCEECCS
T ss_pred             CCCCcceEEEEEEc-------CccccccccCCeEEEc--CCCcEEEeeeCCCCCc-ceeEEEEecCCCccccCCcccccC
Confidence            98888888888887       3222    23334333  3455666665543111 012333222 1110 000011112


Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEec-----ccCCCeeEEEecCCCCCC-cee
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVR-----PLSSSTMVIQWDEPETPN-GQI  325 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~-----~~~~~~v~l~W~~p~~~~-~~~  325 (904)
                      ...+.|.++...+.+.|+|.|.|..|... +..+.+...... +.+| .+...     ......+.|.+.....+. ..+
T Consensus       143 ~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~-s~~~~l~V~~~~-~~~p-~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~  219 (292)
T 4dkd_C          143 WHGFTIHRAKFIQSQDYQCSALMGGRKVM-SISIRLKVQKVI-PGPP-ALTLVPAELVRIRGEAAQIVCSASSVDVNFDV  219 (292)
T ss_dssp             SSCCEETTCCGGGCSEEEEEECSTTSCEE-CCCEEEEEECCC-CSSC-EEEEESSCBCCCSSSCEEEEEEEEESSSCCEE
T ss_pred             CceEEECCCCHHHCeEEEEEEEeCCCcee-EEEEEEEEeCCC-CCCC-eEEccCCceeEecCCCEEEEEEecCCCCceEE
Confidence            24499999999999999999998866432 223333222110 0111 11111     012334444443211110 011


Q ss_pred             eEE--------------EEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         326 TAK--------------HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       326 ~~~--------------~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                      .++              ..........+.|..+.....-.+++.+.|..|.
T Consensus       220 ~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~  270 (292)
T 4dkd_C          220 FLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGK  270 (292)
T ss_dssp             ECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCE
T ss_pred             EEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCC
Confidence            110              0001112346888999988888899999988775

>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*

Probab=99.02  E-value=4.8e-09  Score=105.31  Aligned_cols=166  Identities=10%  Similarity=0.121  Sum_probs=98.3

Q ss_pred             eEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcc-------------ccCCCCceee----cceEEEEeee--c
Q psy8771         106 QFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI-------------ELTPDDKLPV----GRNVLTLDRV--T  166 (904)
Q Consensus       106 ~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~-------------~~~~~~~~~~----~~~~l~i~~l--~  166 (904)
                      .+...|.. +.+.+|++++|.|.+.|.|.+.|.|+|....             ......|+..    ...+|.|.++  +
T Consensus         6 ~v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~   84 (250)
T 3esu_F            6 VLIQSTSS-LSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE   84 (250)
T ss_dssp             CEECSCSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred             eEEecCCE-EEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence            35566666 8899999999999999999999999985211             0111234433    2347999999  6


Q ss_pred             CCeEEEEEEEecCcce-EEEEEEEEEeecC---------------CCCCCCCCCcceEEEeecCCeEEEEEeCCCccceE
Q psy8771         167 ESENYTCIAASVLGVI-ETSTIVKVQCKYA---------------PLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLY  230 (904)
Q Consensus       167 d~g~Y~c~a~n~~g~~-~~~~~l~v~~~~~---------------~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~  230 (904)
                      |+|.|.|.|.|..+.. .....|.|.....               ........|..+.+  ....+++|.+...+.+...
T Consensus        85 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~G~~v~L~C~~~~~~~~~  162 (250)
T 3esu_F           85 DIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELV--KPGASVKISCKDSGYAFSS  162 (250)
T ss_dssp             GCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEE--CTTCCEEEEEECCSTTGGG
T ss_pred             hCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEE--cCCceEEEEEEecCCcccC
Confidence            9999999999876642 2344566652100               00000011222322  3345677777754322112


Q ss_pred             EEEEEEeCCCCC-----------------------CeEEe--ecceeceEEEcCCCCCCeEEEEEEEEc
Q psy8771         231 YVIQYKPKAANT-----------------------PYSEI--SGIITTYYTVRNLSPYTEYEFYIIAVN  274 (904)
Q Consensus       231 y~v~~~~~~~~~-----------------------~~~~~--~~~~~~~~~i~~L~p~~~Y~~~v~a~n  274 (904)
                      ..+.|.....+.                       .+...  .......|.|.++++.+.+.|.|.|.+
T Consensus       163 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~  231 (250)
T 3esu_F          163 SWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG  231 (250)
T ss_dssp             SEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred             CEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence            233333221111                       11111  112334799999999999999999997

>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*

Probab=99.02  E-value=1.2e-09  Score=106.79  Aligned_cols=163  Identities=16%  Similarity=0.210  Sum_probs=98.6

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--  165 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--  165 (904)
                      |.+..+| . +.+.+|++++|.|.+.|.|.+.|.|+|.. +...            ....|+..    .+.+|.|.++  
T Consensus         2 ~~v~~~~-~-~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~   79 (213)
T 3mj8_L            2 YTLTQPP-L-VSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQA   79 (213)
T ss_dssp             CCBBCCS-E-EEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred             eeEEeCC-c-EEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCCh
Confidence            3455556 5 99999999999999999999999999821 1111            02234442    4568999999  


Q ss_pred             cCCeEEEEEEEecCc---ceEEEEEEEEEeecCCCCCCC-CCCcceEEEe-----ecCCeEEEEEeCCCccceEEEEEEE
Q psy8771         166 TESENYTCIAASVLG---VIETSTIVKVQCKYAPLLTLP-VAPLDVKISE-----VTATSVRLDWTYPSETLLYYVIQYK  236 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~g---~~~~~~~l~v~~~~~~~~~~P-~~p~~l~~~~-----~~~~sv~l~W~~~~~~~~~y~v~~~  236 (904)
                      +|+|.|.|.|.|..|   .....+.|.|.       ..+ .+| .+.+..     .....++|.+...+.......|.|.
T Consensus        80 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~-------~~~~~~P-~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~  151 (213)
T 3mj8_L           80 GDEADYYCQSWDGTNSAWVFGSGTKVTVL-------GQPNAAP-SVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWE  151 (213)
T ss_dssp             GGCEEEEEEEEETTTTEEEEBCCEEEEEE-------CSCCBCC-EEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred             hhCEEEEEEeccCCcceeEEcCceEEEEe-------CCCCCCC-eEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEE
Confidence            799999999999988   44566777777       332 222 222211     1234555555543211111124444


Q ss_pred             eCCCCC--CeEE----eec---ceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         237 PKAANT--PYSE----ISG---IITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       237 ~~~~~~--~~~~----~~~---~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      ..+...  ....    ...   .....+.|......+.+.|+|.|.|..+
T Consensus       152 k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~  201 (213)
T 3mj8_L          152 ADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGN  201 (213)
T ss_dssp             ETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTE
T ss_pred             cCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCc
Confidence            322110  0000    000   1124578888888889999999999764

>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A

Probab=99.01  E-value=1.5e-09  Score=114.45  Aligned_cols=146  Identities=17%  Similarity=0.233  Sum_probs=100.3

Q ss_pred             CCcEEE-eccCCceEEEEeCCCC----------CCCceec--c----cccccccceEEEEeeeccCCeeeeeeeeccCCC
Q psy8771          38 RDVQVR-PLSSSTMVIQWDEPET----------PNGQITH--P----PTRAARSHARLAAQSVLRRGRLAHAVRQVADPV  100 (904)
Q Consensus        38 ~~l~~~-~~~~~s~~v~W~~~~~----------~~g~i~~--~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~  100 (904)
                      ..|.|. ..+.+.+.|.|.+...          .+|.+..  .    .....+.....|...+........+.+.+    
T Consensus       153 ~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V----  228 (331)
T 3u83_A          153 LVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNV----  228 (331)
T ss_dssp             EEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCE----
T ss_pred             EEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEE----
Confidence            346665 5577889999987421          1333211  1    11333444455555554433333444443    


Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCCCCceeecceEEEEe-ee--cCCeEEEEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGRNVLTLD-RV--TESENYTCIAA  176 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~~~~~~~~~~~l~i~-~l--~d~g~Y~c~a~  176 (904)
                       ..+|.+...+.....+.+|+.++|.|.+.|.|.|. |.|+++ +..+...  ....++.|.|. ++  +|+|.|+|.|.
T Consensus       229 -~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~-~~~~~~~--~~~~~~~L~i~~~v~~~d~G~Y~C~a~  304 (331)
T 3u83_A          229 -QYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTL-NGSLPKG--VEAQNRTLFFKGPINYSLAGTYICEAT  304 (331)
T ss_dssp             -EEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEET-TBSCCTT--EEEETTEEEECSCCCGGGCEEEEEEEE
T ss_pred             -ecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEEC-CCccccc--ceecCcEEEEeCCCccccCeEEEEEEE
Confidence             45666664444337788999999999999999998 999999 6666443  34467789999 78  69999999999


Q ss_pred             ecCcceEEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKVQ  191 (904)
Q Consensus       177 n~~g~~~~~~~l~v~  191 (904)
                      |..|..+..+.|.|.
T Consensus       305 N~~G~~~~~~~l~V~  319 (331)
T 3u83_A          305 NPIGTRSGQVEVNIT  319 (331)
T ss_dssp             ETTEEEEEEEEECCB
T ss_pred             eccccceEEEEEEEe
Confidence            999999999999888

>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}

Probab=99.01  E-value=5.4e-09  Score=109.78  Aligned_cols=229  Identities=12%  Similarity=0.073  Sum_probs=113.3

Q ss_pred             CCCCcEEEeccC-CceEEEEeCCCCC----------------------------CCceecccccccccceEEEEeeeccC
Q psy8771          36 APRDVQVRPLSS-STMVIQWDEPETP----------------------------NGQITHPPTRAARSHARLAAQSVLRR   86 (904)
Q Consensus        36 ~p~~l~~~~~~~-~s~~v~W~~~~~~----------------------------~g~i~~~~~~~~~~~~~~~~~~~~~~   86 (904)
                      ....|.|...+. +...|.|.+....                            ++.+....+...|...+.|...+...
T Consensus        19 ~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~   98 (327)
T 2wng_A           19 ESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRKGS   98 (327)
T ss_dssp             SCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEESST
T ss_pred             CcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEeecCCC
Confidence            445555555554 5568889765321                            11233333444455555565555433


Q ss_pred             Cee-----eeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC--eEEEeeCCccccCCCCceee---c
Q psy8771          87 GRL-----AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP--FVKWRKGQNIELTPDDKLPV---G  156 (904)
Q Consensus        87 g~~-----~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~~~~~~~---~  156 (904)
                      ...     ..+.+.|..  ...+|.+. .| . ..+.+|+.+.|.|.+.|.|.+  .|+|+|+ +..+....+...   .
T Consensus        99 ~~~~~~~~~~~~l~V~~--~p~~p~i~-~~-~-~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~-g~~l~~~~~~~~~~~~  172 (327)
T 2wng_A           99 PDTEFKSGAGTELSVRA--KPSAPVVS-GP-A-ARATPQHTVSFTCESHGFSPRDITLKWFKN-GNELSDFQTNVDPVGE  172 (327)
T ss_dssp             TCEEEEECCCEEEEEEB--CCCCCEEE-CC-S-SCBCTTCEEEEEEEEEEEBSSCCEEEEEET-TEECCCEEEEEECSSC
T ss_pred             cceeEeecCcEEEEEEe--cCCCceee-cc-c-cccCCCCEEEEEEEEeCccCCCcEEEEEEC-CEEccccccccccccC
Confidence            211     123344432  23455665 33 3 667899999999999998876  8999999 766654332111   1


Q ss_pred             ------ceEEEEeee--cCCeEEEEEEEecCcce---EEEEEEEEEeecCCCCCCCCCCcceEEEe---ecCCeEEEEEe
Q psy8771         157 ------RNVLTLDRV--TESENYTCIAASVLGVI---ETSTIVKVQCKYAPLLTLPVAPLDVKISE---VTATSVRLDWT  222 (904)
Q Consensus       157 ------~~~l~i~~l--~d~g~Y~c~a~n~~g~~---~~~~~l~v~~~~~~~~~~P~~p~~l~~~~---~~~~sv~l~W~  222 (904)
                            ...|.|...  +++|.|+|.|.|..|..   ...+.+.+.        ...+|. +.+..   .....++|.+.
T Consensus       173 ~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~--------v~~~P~-i~~~~~~~~~G~~v~l~C~  243 (327)
T 2wng_A          173 SVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSET--------IRVPPT-LEVTQQPVRAENQVNVTCQ  243 (327)
T ss_dssp             CSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGT--------BCBCCE-EEEEEECCSSTTCCEEEEE
T ss_pred             CCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccc--------cCCCCE-EEEecCCcCCCCcEEEEEE
Confidence                  224556555  35799999999988762   333333222        111221 11110   01223333333


Q ss_pred             CCCccceEEEEEEEeCCCC------CCeEEeecc---eeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         223 YPSETLLYYVIQYKPKAAN------TPYSEISGI---ITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       223 ~~~~~~~~y~v~~~~~~~~------~~~~~~~~~---~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.+.....|.|...+..      .........   ....+.|..+...+.+.|+|.|.|..|..
T Consensus       244 ~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~  309 (327)
T 2wng_A          244 VRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA  309 (327)
T ss_dssp             EEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred             EccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence            2211111112333322110      000000001   11457888888999999999999998753

>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}

Probab=99.01  E-value=1.2e-09  Score=93.88  Aligned_cols=87  Identities=21%  Similarity=0.422  Sum_probs=69.7

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeCCccccCCCC-----ceeec-------ceEEEEeee--
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKGQNIELTPDD-----KLPVG-------RNVLTLDRV--  165 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~~~~~~~~~-----~~~~~-------~~~l~i~~l--  165 (904)
                      ..+|.|...|.+ ..+.+|++++|.|.+.|.|  .+.|.|+|+ +..+....     ++...       .+.|.|.++  
T Consensus         8 ~~~P~i~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~   85 (112)
T 3so5_A            8 FPXPQITVQPET-QSAIXGSDVSFTCSAASSSDSPMTFAWXXD-NEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEF   85 (112)
T ss_dssp             CCSCEEEECCCC-EEECTTCCEEEEEEEEESCCCCCEEEEEET-TEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCG
T ss_pred             CCCCeEEeCCCC-cEEECCCCEEEEEEEecCCCCCEEEEEccC-CcccccccccceeeeeccCCCccccceEEEEecccc
Confidence            568999999988 8999999999999999654  589999999 66555432     22222       478999999  


Q ss_pred             cCCeEEEEEEEecCcc-eEEEEEEEE
Q psy8771         166 TESENYTCIAASVLGV-IETSTIVKV  190 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~g~-~~~~~~l~v  190 (904)
                      +|+|.|+|.|.|..|. .+..+.|.|
T Consensus        86 ~D~G~Y~C~a~n~~g~~~s~~~~l~V  111 (112)
T 3so5_A           86 TSEGXYQCVISNHFGSSYSVXAXLTI  111 (112)
T ss_dssp             GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred             ccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence            6999999999999998 456777765

>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}

Probab=99.01  E-value=6.1e-10  Score=96.48  Aligned_cols=89  Identities=27%  Similarity=0.515  Sum_probs=68.0

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC------ceeecceEEEEe-----ee--cC
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD------KLPVGRNVLTLD-----RV--TE  167 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~------~~~~~~~~l~i~-----~l--~d  167 (904)
                      +..||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....      +....++.+.+.     ++  +|
T Consensus         6 ~~~pP~i~~~p~~-~~v~~G~~v~L~C~~~g~P~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D   83 (117)
T 2v9t_A            6 EDFPPRIVEHPSD-LIVSKGEPATLNCKAEGRPTPTIEWYKG-GERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPD   83 (117)
T ss_dssp             CCEEEEEEECCCC-EEECTTCCEEECCEEEEESCCEEEEEET-TEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSS
T ss_pred             ccCCCeeEcCCCC-EEEcCCCcEEEEEECCccCCCeEEEEEC-CEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCc
Confidence            3678999999988 9999999999999999999999999999 65554331      233345554443     33  69


Q ss_pred             CeEEEEEEEecCcceEE-EEEEEEE
Q psy8771         168 SENYTCIAASVLGVIET-STIVKVQ  191 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~~~~-~~~l~v~  191 (904)
                      +|.|+|.|.|..|...+ .+.|.+.
T Consensus        84 ~G~Y~C~a~N~~G~~~s~~~~l~~~  108 (117)
T 2v9t_A           84 EGVYVCVARNYLGEAVSHDASLEVA  108 (117)
T ss_dssp             CEEEEEEEEETTEEEECCCEEEEEC
T ss_pred             CEEEEEEEEeCccceEeeeEEEEhh
Confidence            99999999999998654 4455554

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}

Probab=99.01  E-value=1.7e-09  Score=89.92  Aligned_cols=95  Identities=17%  Similarity=0.149  Sum_probs=72.6

Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVL  793 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~  793 (904)
                      .|. +|.+|++..++.+++.|.|.++.  ..++.+..|+|+|.....      ...+. ..+.++|.||+|++.|.|.|+
T Consensus         7 ~Ps-~v~~l~v~~~t~~Sv~LsW~~p~--~~~~~i~~Y~v~~~~~~~------~~~~~~~~t~~~i~gL~PgT~Y~~~V~   77 (104)
T 2dle_A            7 GAI-QVFDVTAVNISATSLTLIWKVSD--NESSSNYTYKIHVAGETD------SSNLNVSEPRAVIPGLRSSTFYNITVC   77 (104)
T ss_dssp             SCC-BEEEEEEEEECSSCEEEEEEESC--STTCCSCEEEEEEECSSC------EEEEEESSSEEECCSCCSSCEEEEEEE
T ss_pred             CCC-CCceEEEEEeecCEEEEEEcCCC--CCCCceEEEEEEEECCCC------eEEEcCCCCEEEECCCCCCCEEEEEEE
Confidence            344 57899999999999999999873  456667899999985421      22334 789999999999999999999


Q ss_pred             EeeCCCCCCCCCcEEeecCCCCCCCC
Q psy8771         794 AGTSIGDGPSSYPITIRTHEDDPSEV  819 (904)
Q Consensus       794 a~~~~g~g~~s~~~~~~t~~~~P~~v  819 (904)
                      |......+. +..+.+.|.++++++.
T Consensus        78 A~~~~~~~~-p~~~~~~T~p~p~~~~  102 (104)
T 2dle_A           78 PVLGDIEGT-PGFLQVHTPPVPSGPS  102 (104)
T ss_dssp             EESSSCCCB-CEEEEEECCCCSCCCC
T ss_pred             EEECCcccC-CeeEEEEccCCCCCCC
Confidence            996544443 3457788887777653

>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*

Probab=99.01  E-value=4e-09  Score=102.49  Aligned_cols=149  Identities=15%  Similarity=0.229  Sum_probs=99.4

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC------------------------------CCceecccccccccceEEEEeeecc
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP------------------------------NGQITHPPTRAARSHARLAAQSVLR   85 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~------------------------------~g~i~~~~~~~~~~~~~~~~~~~~~   85 (904)
                      ....|.|...+.+...|.|.+....                              +|.+....+...|.....|...+..
T Consensus        15 ~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~   94 (208)
T 3r4d_A           15 NNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTDEN   94 (208)
T ss_dssp             CCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEEEEECSS
T ss_pred             CcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEEEEEccc
Confidence            4556666666677788999765221                              2344444445555555556555543


Q ss_pred             CCe-eeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEE
Q psy8771          86 RGR-LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTL  162 (904)
Q Consensus        86 ~g~-~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i  162 (904)
                      .+. .....+.|...  ...|.+...+.  . +..|+.+.|.|.+.|.| |.|.|+++ +..+....++..  +++.|.|
T Consensus        95 ~~~~~~~~~l~V~~~--~~~p~i~~~~~--~-~~~g~~v~l~C~~~~~p-p~i~W~~~-g~~l~~~~~~~~~~~~~~L~i  167 (208)
T 3r4d_A           95 YRRTQATVRFHVHQP--VTQPFLQVTNT--T-VKELDSVTLTCLSNDIG-ANIQWLFN-SQSLQLTERMTLSQNNSILRI  167 (208)
T ss_dssp             CEEEEEEEEEEEECC--CCCCEEEESCS--S-CCTTCCEEEEEECSCTT-CEEEEEET-TEECCCCSSEEEETTTTEEEE
T ss_pred             CceeEEEEEEEeccC--CCCCEEecCCc--e-EeeCCCEEEEEECCCCC-CceEEEEC-CEeCCCCCCeEEcCCCCEEEE
Confidence            332 23444454422  33466665544  3 88999999999999977 89999999 777776666654  4578999


Q ss_pred             eee--cCCeEEEEEEEecCcceEE-EEEEEEE
Q psy8771         163 DRV--TESENYTCIAASVLGVIET-STIVKVQ  191 (904)
Q Consensus       163 ~~l--~d~g~Y~c~a~n~~g~~~~-~~~l~v~  191 (904)
                      .++  +|+|.|+|.|.|..|...+ ...|.|.
T Consensus       168 ~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~  199 (208)
T 3r4d_A          168 DPIKREDAGEYQCEISNPVSVRRSNSIKLDII  199 (208)
T ss_dssp             SSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred             eccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence            999  6999999999999998553 4444444

>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}

Probab=99.00  E-value=2.7e-09  Score=107.20  Aligned_cols=123  Identities=14%  Similarity=0.182  Sum_probs=77.2

Q ss_pred             eecccccccccceEEEEeeeccCCe-----eeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEE
Q psy8771          64 ITHPPTRAARSHARLAAQSVLRRGR-----LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVK  138 (904)
Q Consensus        64 i~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~  138 (904)
                      +....+...|.....|...+.....     ...+.+.|...  ..+|.+...+...+.+.+|+.+.|.|.+.|.|.|.|+
T Consensus        92 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~--~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~  169 (250)
T 2fbo_J           92 LRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH--TPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVT  169 (250)
T ss_dssp             EEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT--SCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEE
T ss_pred             EEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc--CCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeE
Confidence            3444444555555555555433322     22444555432  2234444333333888899999999999999999999


Q ss_pred             EeeCCccccCCC------------------------Cceee-cceEEEEeee--cCCeEEEEEEEecCc---ceEEEEEE
Q psy8771         139 WRKGQNIELTPD------------------------DKLPV-GRNVLTLDRV--TESENYTCIAASVLG---VIETSTIV  188 (904)
Q Consensus       139 W~k~~~~~~~~~------------------------~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g---~~~~~~~l  188 (904)
                      |+|+ +..+...                        .+... ..+.|.|.++  +|+|.|+|.|.|..|   ....++.|
T Consensus       170 W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l  248 (250)
T 2fbo_J          170 WYTG-PTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTIL  248 (250)
T ss_dssp             EEEE-EECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEE
T ss_pred             EEeC-CCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEEE
Confidence            9999 6555431                        11111 3478999999  699999999999555   44445444


Q ss_pred             E
Q psy8771         189 K  189 (904)
Q Consensus       189 ~  189 (904)
                      .
T Consensus       249 ~  249 (250)
T 2fbo_J          249 K  249 (250)
T ss_dssp             E
T ss_pred             e
Confidence            3

>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=99.00  E-value=9.9e-09  Score=97.34  Aligned_cols=147  Identities=14%  Similarity=0.183  Sum_probs=95.4

Q ss_pred             CCCCcEEEeccCC--ceEEEEeCCCCC-------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCe
Q psy8771          36 APRDVQVRPLSSS--TMVIQWDEPETP-------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQ  106 (904)
Q Consensus        36 ~p~~l~~~~~~~~--s~~v~W~~~~~~-------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~  106 (904)
                      ....|.|...+.+  .+.+.|.+....       ++.......+..+.....|...+   .....+.+.+     ..+|.
T Consensus        14 ~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~~~~d~G~Y~C~~~n---~~~~~~~l~V-----~~~P~   85 (184)
T 3b5h_A           14 SKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLP---EPMGTANIQL-----HGPPR   85 (184)
T ss_dssp             TEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEECGGGCCEEEEEEEES---TTSCEEEEEE-----CCSCC
T ss_pred             CCEEEEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEechhhCeEEEEEEEC---CcCcEEEEEE-----ecCCc
Confidence            3444555544333  448999875211       11111111123344444455544   1123334443     56788


Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEee---CCccccCCC--Cceee----cceEEEEeeec---CCeEEEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRK---GQNIELTPD--DKLPV----GRNVLTLDRVT---ESENYTC  173 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k---~~~~~~~~~--~~~~~----~~~~l~i~~l~---d~g~Y~c  173 (904)
                      +...+.. ..+.+|+.+.|.|.+.|.| .|.|.|+|   ++...+...  .++.+    ....|.|.++.   |+|.|+|
T Consensus        86 ~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C  164 (184)
T 3b5h_A           86 VKAVKSS-EHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRC  164 (184)
T ss_dssp             CEESCSE-EEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEE
T ss_pred             eeecCCC-cEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEE
Confidence            8888866 8899999999999999999 79999999   534444322  44443    23489999884   8999999


Q ss_pred             EEEecCcceEEEEEEEEE
Q psy8771         174 IAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~  191 (904)
                      .|.|..|.....+.|.|.
T Consensus       165 ~a~N~~g~~~~~~~l~V~  182 (184)
T 3b5h_A          165 NGTSSKGSDQAIITLRVR  182 (184)
T ss_dssp             EEEETTEEEEEEEEEEEC
T ss_pred             EEEeCCCcceEEEEEEEe
Confidence            999999999988888876

>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...

Probab=99.00  E-value=3.7e-09  Score=100.34  Aligned_cols=70  Identities=17%  Similarity=0.210  Sum_probs=62.4

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      ..+.+|+.++|.|.+.|.|.|.|.|+++ +..      +....+.|.|.++  +|+|.|+|.|.|..|..+..+.|.|.
T Consensus       107 ~~v~~g~~~~l~C~~~~~p~~~v~W~~~-~~~------~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~  178 (184)
T 2ny1_B          107 THLLQGQSLTLTLESPPGSSPSVQCRSP-RGK------NIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL  178 (184)
T ss_dssp             SEEETTCCEEEEEECCTTCCCEEEEECT-TSC------EEEESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             ceeecCCCEEEEEEcCCCCCCEEEEEeC-CCc------cccCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEE
Confidence            6788999999999999999999999999 432      2446789999999  69999999999999999999999998

>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4

Probab=99.00  E-value=8.3e-10  Score=92.73  Aligned_cols=85  Identities=20%  Similarity=0.275  Sum_probs=67.5

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-Cceeec-ce---EEEEeee--cCCeEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPVG-RN---VLTLDRV--TESENYTC  173 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~-~~---~l~i~~l--~d~g~Y~c  173 (904)
                      ...+|.|+..+.+.+.+.+|+.+.|.|.+ +.|.+.|.|+|+ +..+..+ .++.+. ++   .|.|.++  +|+|.|+|
T Consensus        12 ~~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C   89 (104)
T 1pd6_A           12 EKKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKN-GQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQC   89 (104)
T ss_dssp             CSTTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEES-SSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEE
T ss_pred             ccCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEEC-CEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEE
Confidence            46778888777765889999999999999 799999999999 6666655 555542 33   8999998  69999999


Q ss_pred             EEEecCcceEEEEEEEEE
Q psy8771         174 IAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~  191 (904)
                      .|    |.....+.|.|.
T Consensus        90 ~a----~~~~~~~~l~V~  103 (104)
T 1pd6_A           90 VV----GGEKCSTELFVK  103 (104)
T ss_dssp             EE----TTEEECCEEEEE
T ss_pred             EE----CCCcEEEEEEEe
Confidence            99    445566677765

>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4

Probab=98.99  E-value=2.2e-09  Score=104.69  Aligned_cols=149  Identities=20%  Similarity=0.208  Sum_probs=97.1

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC----------------------CCceecccccccccceEEEEeeeccCC--eeee
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP----------------------NGQITHPPTRAARSHARLAAQSVLRRG--RLAH   91 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~----------------------~g~i~~~~~~~~~~~~~~~~~~~~~~g--~~~~   91 (904)
                      ....|.|...+.+...|.|.+....                      ++.+....+...|.....|...+....  ....
T Consensus        17 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~   96 (212)
T 1f97_A           17 ESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVS   96 (212)
T ss_dssp             CCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEEETTSSSEEEEE
T ss_pred             CCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEEccCCCcccEEE
Confidence            5666777766778889999765332                      122333334444555455555443321  2233


Q ss_pred             eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEE-EccCCCCeEEEeeCCcc-ccCCCCc---------ee--ecce
Q psy8771          92 AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCV-AVGSPMPFVKWRKGQNI-ELTPDDK---------LP--VGRN  158 (904)
Q Consensus        92 ~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~-~~g~p~p~i~W~k~~~~-~~~~~~~---------~~--~~~~  158 (904)
                      +.+.+     ..+|.+...+.. ..+.+|+.+.|.|. +.|.|.|.|.|+++ +. .+....+         +.  ...+
T Consensus        97 ~~l~V-----~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~i~W~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~  169 (212)
T 1f97_A           97 IHLTV-----LVPPSKPTISVP-SSVTIGNRAVLTCSEHDGSPPSEYSWFKD-GISMLTADAKKTRAFMNSSFTIDPKSG  169 (212)
T ss_dssp             EEEEE-----EBCCCCCEEECC-SEEETTSCEEEEEECSCCBSCCEEEEEET-TEESBC-----CBSCSSSCEEECTTTC
T ss_pred             EEEEE-----EcCCCCcccCCc-cccCCCCeEEEEEEcccCcCCCEEEEEeC-CcccccccccccccccCceeEecCCCc
Confidence            34444     344554444445 67899999999999 79999999999999 65 6654322         22  2467


Q ss_pred             EEEEeee--cCCeEEEEEEEecCcce--EEEEEEEEE
Q psy8771         159 VLTLDRV--TESENYTCIAASVLGVI--ETSTIVKVQ  191 (904)
Q Consensus       159 ~l~i~~l--~d~g~Y~c~a~n~~g~~--~~~~~l~v~  191 (904)
                      .|.|.++  +|+|.|+|.|.|..|..  +....|.|.
T Consensus       170 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~  206 (212)
T 1f97_A          170 DLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV  206 (212)
T ss_dssp             CEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred             eEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence            8999999  69999999999999987  445556655

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.99  E-value=1.1e-09  Score=90.25  Aligned_cols=82  Identities=16%  Similarity=0.296  Sum_probs=66.6

Q ss_pred             CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCC-eEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTP-YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ++|.+|++...+.+++.|+|+++.+.+.+|.|.|+..+.... .........++++|.+|+|++.|.|+|+|.|..|.+.
T Consensus         3 ~~P~~l~~~~~~~~si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~   82 (94)
T 1j8k_A            3 DRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQ   82 (94)
T ss_dssp             CCCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSSCCCC
T ss_pred             CCCCccEEEeecCCEEEEEEcCCCCCcceEEEEEEeCCCCCceEEecCCCCccEEEeCCCCCCCEEEEEEEEEcCCCcCC
Confidence            578999999999999999999998889999999987643211 1112234568899999999999999999999999876


Q ss_pred             CCC
Q psy8771         281 PSS  283 (904)
Q Consensus       281 ~s~  283 (904)
                      +..
T Consensus        83 p~~   85 (94)
T 1j8k_A           83 PLI   85 (94)
T ss_dssp             CEE
T ss_pred             CEE
Confidence            543

>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A

Probab=98.99  E-value=8.4e-10  Score=93.02  Aligned_cols=83  Identities=31%  Similarity=0.493  Sum_probs=70.1

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cc---eEEEEeee--cCCeEEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GR---NVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~---~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ..||.|...+.+ +.+.+|+++.|.|.+.|.|.+ |.|+|+ +..+..+.++.+ .+   ..|.|.++  +|+|.|+|. 
T Consensus         6 ~~pp~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~-v~W~k~-~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~-   81 (103)
T 2e7b_A            6 SGPVRFQEALKD-LEVLEGGAATLRCVLSSVAAP-VKWCYG-NNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS-   81 (103)
T ss_dssp             CCCCCCTBCCCC-EEEESSSCEEEEEECSSCCCS-CEEEES-SSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE-
T ss_pred             CCCCEEEecCcc-EEEECCCcEEEEEEEeCCCCC-eEEEEC-CEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE-
Confidence            568888888888 999999999999999999999 999999 777766666654 22   25999999  699999998 


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                         .|.....+.|.|.
T Consensus        82 ---~g~~~~~~~l~V~   94 (103)
T 2e7b_A           82 ---FGDQTTSATLTVT   94 (103)
T ss_dssp             ---CSSCBCCBCEEEE
T ss_pred             ---ECCcEEEEEEEEE
Confidence               5677778888888

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=5.8e-11  Score=100.24  Aligned_cols=92  Identities=26%  Similarity=0.454  Sum_probs=74.2

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      +|.+|++..++.+++.|+|++|     ++.+.+|.|+|+....... .....+. ..+.++|.+|+|++.|.|+|+|.+.
T Consensus        10 ~P~~l~v~~~t~~si~lsW~~p-----~g~i~~Y~v~y~~~~~~~~-~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~   83 (105)
T 2ekj_A           10 PPSNLALASETPDSLQVSWTPP-----LGRVLHYWLTYAPASGLGP-EKSVSVPGARSHVTLPDLQAATKYRVLVSAIYA   83 (105)
T ss_dssp             CCEEEEEEEEETTEEEEEEECC-----SSCCSBBCBBCCCTTSCSC-CCCBCCBTTSSEEEECSCCSSCCCBCBBCBBCS
T ss_pred             CCCceEEEeCCCCEEEEEEeCC-----CCcceEEEEEEEECCCCCc-cEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence            6899999999999999999998     3679999999987654321 1223344 7899999999999999999999999


Q ss_pred             CCCCCCCCcEEeecC-CCCCC
Q psy8771         798 IGDGPSSYPITIRTH-EDDPS  817 (904)
Q Consensus       798 ~g~g~~s~~~~~~t~-~~~P~  817 (904)
                      .|.|..+. ..++|. ++.|.
T Consensus        84 ~g~g~~s~-~~~~T~~p~~P~  103 (105)
T 2ekj_A           84 AGRSEAVS-ATGQTACPSGPS  103 (105)
T ss_dssp             SCBCCCBC-CBCCCCCCCCCC
T ss_pred             CccCCccc-cEEEccCCCCCC
Confidence            99998876 446676 66653

>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}

Probab=98.98  E-value=7e-09  Score=108.17  Aligned_cols=238  Identities=12%  Similarity=0.107  Sum_probs=134.8

Q ss_pred             eEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      +.+.+|+.+.|.|... |.|.+.|+|+|+ +..+....|+.+.    ...|.|.++  +|+|.|+|.|.|..|... +..
T Consensus        11 ~~v~eg~~v~l~~~~~~~~p~~~v~W~k~-~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~   88 (312)
T 2y23_A           11 VNVDDDGVISLNFECDKMTPKSEFSWSKD-YVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYL   88 (312)
T ss_dssp             EEECTTCCEEEEEECSSCCTTCCEEEEET-TEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEE
T ss_pred             EEEecCCeEEEEEEEeCCCCCcEEEEEEC-CEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEE
Confidence            7888999999999886 689999999999 7777777777652    268999999  699999999999988654 445


Q ss_pred             EEEEeecC-C----CCCCCCCCc----ceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCC----CCCCeEEee--cce
Q psy8771         188 VKVQCKYA-P----LLTLPVAPL----DVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKA----ANTPYSEIS--GII  251 (904)
Q Consensus       188 l~v~~~~~-~----~~~~P~~p~----~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~----~~~~~~~~~--~~~  251 (904)
                      |.|..... .    ....|..+.    ...+  .....+.|.+... +.+..  .+.|...+    ....+....  ...
T Consensus        89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v--~~G~~v~l~C~~~~~~p~~--~v~W~~~~~~i~~~~~~~~~~~~~~~  164 (312)
T 2y23_A           89 IDEEELKRLLALSHEHKFPTVPVKSELAVEI--LEKGQVRFWMQAEKLSGNA--KVNYIFNEKEIFEGPKYKMHIDRNTG  164 (312)
T ss_dssp             ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEE--CSSSCEEEEEEESCCCSSC--EEEEEETTEEECSSSSCEEEEETTTT
T ss_pred             EEEeeeeeeecccccCCCCccccccCCceEE--eeCCCEEEEEEEEeCCCCC--EEEEEECCEECeeCCcEEEEEccCCC
Confidence            55431000 0    000222111    2222  2334566666544 22222  23343322    112222221  123


Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCC----------------CCCCCCCC---ceEecccCCCeeE
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE----------------TEPGTAPR---DVQVRPLSSSTMV  312 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~----------------~~p~~~p~---~l~~~~~~~~~v~  312 (904)
                      ...+.|.++...+.+.|+|.|.+..+...    .......                .....+|.   .+.........+.
T Consensus       165 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~  240 (312)
T 2y23_A          165 IIEMFMEKLQDEDEGTYTFQLQDGKATNH----STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVL  240 (312)
T ss_dssp             EEEEEESCCCGGGCEEEEEEEESSSCEEE----EEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEE
T ss_pred             EEEEEEccCCcccCEeEEEEEEeCCceEE----EEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEE
Confidence            35599999999999999999987543221    1111000                00000111   0111222334555


Q ss_pred             EEecCCCCCCc-eeeEEEEE----------eeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771         313 IQWDEPETPNG-QITAKHHR----------RIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  362 (904)
Q Consensus       313 l~W~~p~~~~~-~~~~~~~~----------~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~  362 (904)
                      |.+.....+.. .+.++...          .......+.|..+.....-.+++.|.|..|.
T Consensus       241 l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~  301 (312)
T 2y23_A          241 LKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGK  301 (312)
T ss_dssp             EEEEEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCC
T ss_pred             EEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCc
Confidence            55554333332 34443210          0122357888899888888899999998885

>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...

Probab=98.98  E-value=1.3e-09  Score=103.47  Aligned_cols=143  Identities=15%  Similarity=0.178  Sum_probs=97.0

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCcc-ccC------------CCCceeec-------ceEEEEeee--cCCeEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI-ELT------------PDDKLPVG-------RNVLTLDRV--TESENYT  172 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~-~~~------------~~~~~~~~-------~~~l~i~~l--~d~g~Y~  172 (904)
                      +.+.+|++++|.|.+.|.|.+.|.|+|++.. .+.            ...|+...       ..+|.|.++  +|+|.|+
T Consensus         5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~   84 (184)
T 2ny1_B            5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI   84 (184)
T ss_dssp             EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred             EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence            7889999999999999999999999998432 110            12233321       445999999  6999999


Q ss_pred             EEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeeccee
Q psy8771         173 CIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT  252 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~  252 (904)
                      |.+.|..|    .+.|.|.       ..+.++ ...+  .....++|.+...+.+..  .+.|...+.  ..    ....
T Consensus        85 C~~~~~~~----~~~l~V~-------~~~~~~-~~~v--~~g~~~~l~C~~~~~p~~--~v~W~~~~~--~~----~~~~  142 (184)
T 2ny1_B           85 CEVEDQKE----EVQLLVF-------GLTANS-DTHL--LQGQSLTLTLESPPGSSP--SVQCRSPRG--KN----IQGG  142 (184)
T ss_dssp             EEETTEEE----EEEEEEE-------EEEESS-CSEE--ETTCCEEEEEECCTTCCC--EEEEECTTS--CE----EEES
T ss_pred             EEEEcCCC----cEEEEEE-------EecCCC-Ccee--ecCCCEEEEEEcCCCCCC--EEEEEeCCC--cc----ccCc
Confidence            99998755    4456665       111112 2233  334567777777544433  455554322  21    1234


Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++...+.+.|+|.|.|..|..
T Consensus       143 ~~L~i~~v~~~d~G~Y~C~a~n~~~~~  169 (184)
T 2ny1_B          143 KTLSVSQLELQDSGTWTCTVLQNQKKV  169 (184)
T ss_dssp             SEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             eEEEEecCCcCCCeEEEEEEEECCceE
Confidence            779999999999999999999876654

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}

Probab=98.98  E-value=3.5e-09  Score=88.03  Aligned_cols=81  Identities=31%  Similarity=0.457  Sum_probs=68.3

Q ss_pred             CCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe-EEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY-SEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       201 P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      +.+|.++++...+.+++.|+|.++.+.+.+|.|.|+.......+ ........+.+.|.+|.|++.|.|+|+|.|..|.+
T Consensus         2 ~~~P~~l~v~~~~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s   81 (98)
T 3teu_A            2 LDAPTDLQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKDNQES   81 (98)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred             CCCCCceEEEEecCCEEEEEEeCCCCcccEEEEEEEECCCCCceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeCCCCC
Confidence            67899999999999999999999988999999999975443333 33344566899999999999999999999999977


Q ss_pred             CC
Q psy8771         280 PP  281 (904)
Q Consensus       280 ~~  281 (904)
                      .+
T Consensus        82 ~p   83 (98)
T 3teu_A           82 PP   83 (98)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}

Probab=98.98  E-value=1.9e-09  Score=89.68  Aligned_cols=80  Identities=24%  Similarity=0.441  Sum_probs=66.6

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      +|.++.+...+.+++.|+|.+|     ++.+.+|.|+|+...+... .....+. ..+.++|.+|.|++.|.|+|+|.|.
T Consensus         4 ~P~~l~v~~~~~~sv~l~W~~p-----~~~i~~Y~v~y~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   77 (98)
T 3teu_A            4 APTDLQVTNVTDTSITVSWTPP-----SATITGYRITYTPSNGPGE-PKELTVPPSSTSVTITGLTPGVEYVVSVYALKD   77 (98)
T ss_dssp             CCEEEEEEEECSSCEEEEEECC-----SSCCSEEEEEEEETTSCSC-CEEEEECTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCceEEEEecCCEEEEEEeCC-----CCcccEEEEEEEECCCCCc-eEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeC
Confidence            6899999999999999999988     3779999999997654322 2344455 8899999999999999999999999


Q ss_pred             CCCCCCC
Q psy8771         798 IGDGPSS  804 (904)
Q Consensus       798 ~g~g~~s  804 (904)
                      .|.|.+.
T Consensus        78 ~G~s~p~   84 (98)
T 3teu_A           78 NQESPPL   84 (98)
T ss_dssp             TEECCCE
T ss_pred             CCCCCCe
Confidence            9977543

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1

Probab=98.97  E-value=6.5e-09  Score=84.27  Aligned_cols=85  Identities=29%  Similarity=0.432  Sum_probs=67.9

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEe
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFT  560 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~  560 (904)
                      +|.+|.+|.+...+.+++.|+|+++.+. +.+.+|+|+.  .+    .   .......+++.+.+|.|++.|.|+|+|+|
T Consensus         3 ~P~~P~~l~~~~~~~~sv~L~W~~~~~~-~~i~~Y~v~~--~~----~---~~~~~~~~~~~~~~L~~~t~Y~~~V~A~n   72 (88)
T 1k85_A            3 APTAPTNLASTAQTTSSITLSWTASTDN-VGVTGYDVYN--GT----A---LATTVTGTTATISGLAADTSYTFTVKAKD   72 (88)
T ss_dssp             SCCCCEEEEEEEECSSCEEEEEECCSCC-SSEEEEEEEE--SS----S---EEEEESSSEEEECCCCSSCEEEEEEEEEE
T ss_pred             CcCCCCccEEEeccCCEEEEEECCCCCC-CCccEEEEEE--CC----E---EEeecCCCEEEeCCCCCCCEEEEEEEEEe
Confidence            4578999999999999999999998753 4589999984  11    1   12223457899999999999999999999


Q ss_pred             CCCC-CCCCCcEEEec
Q psy8771         561 SVGP-GPLSAPVLVKT  575 (904)
Q Consensus       561 ~~g~-~~~S~~~~~~t  575 (904)
                      ..|. +..|..+.++|
T Consensus        73 ~~G~~s~~S~~v~v~T   88 (88)
T 1k85_A           73 AAGNVSAASNAVSVKT   88 (88)
T ss_dssp             TTTEECCCCCCEEEEC
T ss_pred             CCCCcCCCCCCEEEEC
Confidence            9997 77888777654

>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*

Probab=98.97  E-value=1.8e-09  Score=109.55  Aligned_cols=150  Identities=15%  Similarity=0.183  Sum_probs=102.2

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCC--eEEEeeCCccccCCCCceeecceEEEEeee-----cCCeE--EE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMP--FVKWRKGQNIELTPDDKLPVGRNVLTLDRV-----TESEN--YT  172 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p--~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l-----~d~g~--Y~  172 (904)
                      .+|++..   . ..+.+|+.++|.|.+.| .|.|  .|+|+|+ +..+..  ++...+..+.|..+     +|+|.  |+
T Consensus         5 ~~p~~~~---~-~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~-~~~l~~--~~~~~~~~~~~~~~~~~~~~d~g~g~Y~   77 (265)
T 2oz4_A            5 TPPQLVS---P-RVLEVDTQGTVVCSLDGLFPVSEAQVHLALG-DQRLNP--TVTYGNDSFSAKASVSVTAEDEGTQRLT   77 (265)
T ss_dssp             SCCEEEC---C-SEEETTEEEEEEEEEESCSCGGGCEEEEEET-TEECCC--EEEECSSEEEEEEEEEECGGGCEEEEEE
T ss_pred             CCCcccc---C-ceEecCCCEEEEEEccCCCCCcceEEEEEeC-CEECCc--eEeeCCCeEEEEeecccccccCCcceEE
Confidence            4566653   2 46789999999999999 8877  9999999 666654  44455667777665     78885  99


Q ss_pred             EEEEecCcceEEEEEEEEEeecCCCCCCCCC---CcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeec
Q psy8771         173 CIAASVLGVIETSTIVKVQCKYAPLLTLPVA---PLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISG  249 (904)
Q Consensus       173 c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~---p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~  249 (904)
                      |.|.|..|..+..+.|.|.       ..|.+   +....+  .....++|.+...  +..  .+.|  .+..  .  ...
T Consensus        78 C~a~n~~~~~~~~~~l~V~-------~~p~p~~~~~~~~v--~~G~~v~l~C~~~--p~~--~i~W--~g~~--~--~~~  138 (265)
T 2oz4_A           78 CAVILGNQSQETLQTVTIY-------SFPAPNVILTKPEV--SEGTEVTVKCEAH--PRA--KVTL--NGVP--A--QPL  138 (265)
T ss_dssp             EEEEETTEEEEEEEEEEEE-------CCCCCEEEESCSEE--ETTCEEEEEEECC--TTS--EEEE--SSCS--S--SCC
T ss_pred             EEEecCCCCcEEEEEEEEe-------CCCCceeecCCcee--cCCCcEEEEEEcc--CCC--EEEE--CCEE--c--cCC
Confidence            9999999998889999988       33321   112222  2256777777765  222  2445  2211  1  111


Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCC-CC
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNL-GR  278 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~-g~  278 (904)
                      .....+.+..+...+.+.|+|.|.|.. |.
T Consensus       139 ~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~  168 (265)
T 2oz4_A          139 GPRAQLLLKATPEDNGRSFSCSATLEVAGQ  168 (265)
T ss_dssp             SSEECCEEECCGGGTTEEEEEEEEEECSSS
T ss_pred             CCcEEEEEccccccCCceEEEEEEcCCCCC
Confidence            233567888899999999999998644 54

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}

Probab=98.97  E-value=2e-09  Score=89.14  Aligned_cols=80  Identities=31%  Similarity=0.432  Sum_probs=66.4

Q ss_pred             CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCC-eEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTP-YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ++|.+|++...+.+++.|+|.++.+.+.+|.|.|+..+.... .........++++|.+|+|++.|.|+|+|.|..|.|.
T Consensus         3 p~P~~l~v~~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~~g~S~   82 (98)
T 3tes_A            3 PAPKNLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKGGHRSN   82 (98)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTEEBC
T ss_pred             CCCCceEEEecCCCeEEEEecCCcCccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeCCcccC
Confidence            478899999999999999999998889999999998753222 2233344568999999999999999999999988775


Q ss_pred             C
Q psy8771         281 P  281 (904)
Q Consensus       281 ~  281 (904)
                      +
T Consensus        83 p   83 (98)
T 3tes_A           83 P   83 (98)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A

Probab=98.97  E-value=1.3e-08  Score=101.33  Aligned_cols=164  Identities=10%  Similarity=0.132  Sum_probs=95.7

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---------------cCCCCceee-----cceEEEEeee
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---------------LTPDDKLPV-----GRNVLTLDRV  165 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---------------~~~~~~~~~-----~~~~l~i~~l  165 (904)
                      +...|.. +.+.+|++++|.|. .|.|.+.|.|+|+. +..               .....|+.+     ...+|.|.++
T Consensus         3 v~q~p~~-~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v   80 (238)
T 2p1y_A            3 VTQSPRN-KVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA   80 (238)
T ss_dssp             EEEECSE-EEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred             ceECccc-eEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence            4455666 89999999999999 88999999999951 110               011234443     2458999999


Q ss_pred             --cCCeEEEEEEEecCcce-----EEEEEEEEEeecC---C-----CCCCCCCCcceEEEeecCCeEEEEEeCCCccceE
Q psy8771         166 --TESENYTCIAASVLGVI-----ETSTIVKVQCKYA---P-----LLTLPVAPLDVKISEVTATSVRLDWTYPSETLLY  230 (904)
Q Consensus       166 --~d~g~Y~c~a~n~~g~~-----~~~~~l~v~~~~~---~-----~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~  230 (904)
                        +|+|.|.|.|.|..|..     .....|.|.....   +     ....-..|..+.+  ....+++|.+...+.+.. 
T Consensus        81 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v--~~G~~v~L~C~~~~~p~~-  157 (238)
T 2p1y_A           81 TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTV--WEGETAILNCSYENSAFD-  157 (238)
T ss_dssp             CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEE--ETTSCEEEEEECCCTTCC-
T ss_pred             CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEE--eCCCeEEEEEEEecCCCC-
Confidence              69999999999986531     1344666661100   0     0000012333333  334567777766533322 


Q ss_pred             EEEEEEeCCCC------------------CCeEEe--ecceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771         231 YVIQYKPKAAN------------------TPYSEI--SGIITTYYTVRNLSPYTEYEFYIIAVNNL  276 (904)
Q Consensus       231 y~v~~~~~~~~------------------~~~~~~--~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~  276 (904)
                       .|.|.....+                  ..+...  .......|.|.++++.+.+.|.|.|.|..
T Consensus       158 -~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~  222 (238)
T 2p1y_A          158 -YFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN  222 (238)
T ss_dssp             -EEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred             -cEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence             2333322111                  111111  11223679999999999999999999973

>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1

Probab=98.97  E-value=3.8e-09  Score=116.26  Aligned_cols=161  Identities=14%  Similarity=0.158  Sum_probs=92.4

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeCC-ccccC-----------------CCCceeec------ceEEEE
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NIELT-----------------PDDKLPVG------RNVLTL  162 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~~~~-----------------~~~~~~~~------~~~l~i  162 (904)
                      ..|.. ..+.+|+.++|.|.+.|.|  .+.|.|+|+. +..+.                 ...|+.+.      ...|.|
T Consensus       223 ~~~~~-~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I  301 (438)
T 1qgc_4          223 VESGG-GLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQM  301 (438)
T ss_dssp             EEECC-EEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEE
T ss_pred             ecCCc-eEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEE
Confidence            34455 8899999999999999999  6799999852 11110                 12344432      348999


Q ss_pred             eee--cCCeEEEEEEEecCc-----ceEEEEEEEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCc-cceE
Q psy8771         163 DRV--TESENYTCIAASVLG-----VIETSTIVKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSE-TLLY  230 (904)
Q Consensus       163 ~~l--~d~g~Y~c~a~n~~g-----~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~-~~~~  230 (904)
                      .++  +|+|.|+|.|.|..+     .....+.|.|..      ..+.+|.-....    ......++|.+...+. +.. 
T Consensus       302 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~------~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~-  374 (438)
T 1qgc_4          302 SSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSA------AKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEP-  374 (438)
T ss_dssp             CSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECS------SCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSC-
T ss_pred             CCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEec------CCCCCCeEEEcCcccccccCCcEEEEEEeccccCCC-
Confidence            999  699999999999544     223445666651      111122111110    1123455555554322 111 


Q ss_pred             EEEEEEeCCCCCCeEE----eecc---eeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         231 YVIQYKPKAANTPYSE----ISGI---ITTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       231 y~v~~~~~~~~~~~~~----~~~~---~~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      ..|.|...+.......    ....   ....+.|.+....+ +.|+|.|.|..|.
T Consensus       375 ~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~  428 (438)
T 1qgc_4          375 VTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS  428 (438)
T ss_dssp             CEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGT
T ss_pred             cEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCC
Confidence            1344443322111000    0111   12357888777667 9999999998874

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A

Probab=98.97  E-value=6.1e-09  Score=99.32  Aligned_cols=88  Identities=25%  Similarity=0.380  Sum_probs=74.1

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      .+|.++.+...+.+++.|+|++|.     +.+.+|.|.|...+.... .....+. ..++++|.+|+|++.|.|+|+|.+
T Consensus       105 ~~P~~l~v~~~t~~si~l~W~~p~-----~~i~~Y~v~y~~~~~~~~-~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~  178 (195)
T 2qbw_A          105 SVPTNLEVVAATPTSLLISWDASY-----YGVSYYRITYGETGGNSP-VQEFTVPYSSSTATISGLKPGVDYTITVYAYS  178 (195)
T ss_dssp             CSSCCCEEEEEETTEEEEECCCCC-----SSCSEEEEEEEETTCCSC-CEEEEEETTCSEEEECSCCTTCEEEEEEEEES
T ss_pred             CCCcccEEEeCCCCEEEEEEeCCC-----CCccEEEEEEEECCCCCc-ceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEe
Confidence            357899999999999999999883     568999999988764332 2334455 789999999999999999999999


Q ss_pred             CCCCCCCCCcEEeec
Q psy8771         797 SIGDGPSSYPITIRT  811 (904)
Q Consensus       797 ~~g~g~~s~~~~~~t  811 (904)
                      ..|.|+.|.++.+++
T Consensus       179 ~~G~g~~S~~v~~~~  193 (195)
T 2qbw_A          179 DYYGSHHYSPISINY  193 (195)
T ss_dssp             STTSSCBCCCEEEEE
T ss_pred             CCccCCCCCCEEEEe
Confidence            999999999988765

>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A

Probab=98.97  E-value=6.9e-09  Score=97.38  Aligned_cols=144  Identities=14%  Similarity=0.131  Sum_probs=92.8

Q ss_pred             eEEecCCCeEEEEEEc--cCCCCeEEEee--CCcccc----------CCCCceee-cceEEEEeee--cCCeEEEEEEEe
Q psy8771         115 LEVMLDSPLNLSCVAV--GSPMPFVKWRK--GQNIEL----------TPDDKLPV-GRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~--g~p~p~i~W~k--~~~~~~----------~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      +.+..|++++|.|...  +.+.+.|.|+|  + +..+          ....|+.+ .+++|.|.++  +|+|.|+|.|.|
T Consensus         9 v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~-~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n   87 (182)
T 1hnf_A            9 TWGALGQDINLDIPSFQMSDDIDDIKWEKTSD-KKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYD   87 (182)
T ss_dssp             EEEETTSCEEECCTTCCCCSSEEEEEEEEGGG-CCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEE
T ss_pred             EEEecCCCEEEeCCcccccCcCCEEEEEECCC-CcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEe
Confidence            8889999999999553  35678999999  7 5444          23455554 6789999999  699999999999


Q ss_pred             cCcceE--EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceE
Q psy8771         178 VLGVIE--TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYY  255 (904)
Q Consensus       178 ~~g~~~--~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~  255 (904)
                      ..|...  ....|.|.       ..+..|. +..   ....++|.+...+.+...  +.|...+  ...    ......+
T Consensus        88 ~~g~~~~~~~~~L~V~-------~~~~~P~-i~~---~~~~v~L~C~~~~~p~~~--~~W~~~g--~~l----~~~~~~i  148 (182)
T 1hnf_A           88 TKGKNVLEKIFDLKIQ-------ERVSKPK-ISW---TCINTTLTCEVMNGTDPE--LNLYQDG--KHL----KLSQRVI  148 (182)
T ss_dssp             TTSCEEEEEEEEEEEE-------CCCCCCE-EEE---ETTTTEEEEECSSCSSCE--EEEEESS--CEE----EEESSCE
T ss_pred             CCCceeEEEEEEEEEc-------CcCCCCE-EEE---ccCcEEEEeEccCCCCCE--EEEEECC--EEC----CCCCcEE
Confidence            988754  45567776       3333342 222   122466666655433333  3343332  111    1112233


Q ss_pred             EEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         256 TVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       256 ~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      .+.. ...+.+.|+|.|.|..|..
T Consensus       149 ~~~~-~~~d~G~Y~C~a~N~~~~~  171 (182)
T 1hnf_A          149 THKW-TTSLSAKFKCTAGNKVSKE  171 (182)
T ss_dssp             EEEC-CSCEEEEEEEEEECSSCEE
T ss_pred             EEec-ccCCCcEEEEEEEeCCCCc
Confidence            3332 4678999999999998764

>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*

Probab=98.96  E-value=3.1e-09  Score=104.09  Aligned_cols=149  Identities=21%  Similarity=0.351  Sum_probs=98.4

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCC--------------CCCcee----cccccccccceEEEEeeeccCCee--eeeeee
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPET--------------PNGQIT----HPPTRAARSHARLAAQSVLRRGRL--AHAVRQ   95 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~--------------~~g~i~----~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~   95 (904)
                      ....|.|...+.+.+.|.|.+...              .+|.+.    .......+.....|...+. .|..  ....+.
T Consensus        25 ~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~-~g~~~~~~~~l~  103 (217)
T 2vr9_A           25 EPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNR-VGQAVSRHASLQ  103 (217)
T ss_dssp             SCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEET-TEEEECCCEEEE
T ss_pred             CcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecC-CCccccccceEE
Confidence            566677776677788999976411              122211    1112333444444444432 3322  133344


Q ss_pred             ccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccC--------CCCcee-ecceEEEEeee
Q psy8771          96 VADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELT--------PDDKLP-VGRNVLTLDRV  165 (904)
Q Consensus        96 v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~--------~~~~~~-~~~~~l~i~~l  165 (904)
                      +.    ..+|.+...+.. ..+..|+.+.|.|.+ .|.|.|.|.|+|+ +..+.        ...++. ..++.|.|.++
T Consensus       104 v~----~~~~~~~~~~~~-~~~~~g~~v~l~C~~~~g~p~~~v~W~~~-g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~  177 (217)
T 2vr9_A          104 IA----VLRDDFRVEPKD-TRVAKGETALLECGPPKGIPEPTLIWIKD-GVPLDDLKAMSFGASSRVRIVDGGNLLISNV  177 (217)
T ss_dssp             EC----EECCSCSBCCCC-EEECTTSCEEECCBCCCEESCCEEEEEET-TEEECCCCCC---CCCSEEEETTTEEEESSC
T ss_pred             EE----EeCCCcEECCCc-cEEcCCCeEEEEEECCCCCCCCeEEEEEC-CcCCCcccccccccCCcEEecCCCcEEEeeC
Confidence            32    234556666666 889999999999999 8999999999999 66665        233333 35678999999


Q ss_pred             --cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         166 --TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       166 --~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                        +|+|.|+|.|.|..|....+..+.+.
T Consensus       178 ~~~d~G~Y~C~a~N~~G~~~~~~~~lv~  205 (217)
T 2vr9_A          178 EPIDEGNYKCIAQNLVGTRESSYAKLIV  205 (217)
T ss_dssp             CSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred             CHHHCeEEEEEEEcccceeccccEEEEE
Confidence              69999999999999998877666655

>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2

Probab=98.96  E-value=5.7e-09  Score=114.93  Aligned_cols=84  Identities=14%  Similarity=0.251  Sum_probs=59.0

Q ss_pred             CCCeE-EcCCCCceE-EecCCCeEEEEEEccCC----CCeEEEeeCCccccCCCCc---ee------ecceEEEEeee--
Q psy8771         103 VPPQF-SIPPPALLE-VMLDSPLNLSCVAVGSP----MPFVKWRKGQNIELTPDDK---LP------VGRNVLTLDRV--  165 (904)
Q Consensus       103 ~~P~~-~~~~~~~~~-~~~g~~~~l~C~~~g~p----~p~i~W~k~~~~~~~~~~~---~~------~~~~~l~i~~l--  165 (904)
                      .+|.+ ..+|.. .. +.+|++++|.|.+.|.|    .+.|+|+|+ +..+.....   ..      ...+.|.|.++  
T Consensus       237 ~~p~v~~~~p~~-~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~  314 (444)
T 1igt_B          237 GGPSVFIFPPKI-KDVLMISLSPIVTCVVVDVSEDDPDVQISWFVN-NVEVHTAQTQTHREDYNSTLRVVSALPIQHQDW  314 (444)
T ss_dssp             CCCEEEEECCCH-HHHHCTTSCCEEEEEEEEECTTCCCCEEEEEET-TEECSSTTCBCCEEECSSSEEEEEEEECCHHHH
T ss_pred             CCceEEecCCch-hheeecCCCcEEEEEEeecccCCCCeEEEEEEC-CccccCcccccceeCCCCcEEEEEEEEEcHHHh
Confidence            46776 555543 33 58999999999999984    369999999 555533211   11      12357999988  


Q ss_pred             cCCeEEEEEEEecCcceEEEEEE
Q psy8771         166 TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      +|+|.|+|.|.|..|.......+
T Consensus       315 ~d~G~Y~C~a~n~~~~~~~~~~v  337 (444)
T 1igt_B          315 MSGKEFKCKVNNKDLPAPIERTI  337 (444)
T ss_dssp             HTTCEEEEEEECTTCSSCEEEEE
T ss_pred             ccCCcEEEEEEcCCCCCceEEEE
Confidence            69999999999998876333333

>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*

Probab=98.96  E-value=6.9e-09  Score=100.07  Aligned_cols=142  Identities=11%  Similarity=0.108  Sum_probs=91.3

Q ss_pred             CCCCcEEEeccCCce-EEEEeCCCC----CCCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcC
Q psy8771          36 APRDVQVRPLSSSTM-VIQWDEPET----PNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIP  110 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~-~v~W~~~~~----~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~  110 (904)
                      ....|.|...+.+.. .+.|.+...    ..+.+........|...+.|...+  ......+.+.+     ..+|.+...
T Consensus        23 ~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~~~L~i~~v~~~D~G~Y~C~a~n--~~~s~~~~l~V-----~~~p~~~~~   95 (204)
T 3sgj_C           23 DSVTLKCQGAYSPEDQSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTQL--STLSDPVQLEV-----HIGWLLLQA   95 (204)
T ss_dssp             CCEEEEEECCSSSSCCCEEEEETTEEESCCSSEEEESSCCGGGCEEEEEEETT--SBCCCCEEEEE-----ECSSEEEEC
T ss_pred             CCEEEEEcCCCCCCCcEEEEEECCEEcccCccEEEEecccccCCEEEEEEeCC--CcccccEEEEE-----ecCceEecC
Confidence            444455555454444 399987521    123444444455555555555433  22222334444     345566665


Q ss_pred             CCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe-cCcceEEEE
Q psy8771         111 PPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS-VLGVIETST  186 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n-~~g~~~~~~  186 (904)
                      +.  ..+.+|+.++|.|.+.+. |.+.|.|+|+ +..+    ......+.|.|.++  +|+|.|+|.|.| ..+..+..+
T Consensus        96 ~~--~~v~~G~~v~L~C~~~~~~p~~~v~W~k~-g~~~----~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~  168 (204)
T 3sgj_C           96 PR--WVFKEEDPIHLRCHSWKNTALHKVTYLQN-GKGR----KYFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETV  168 (204)
T ss_dssp             SC--SEEETTCCEEEEEEEGGGCCCEEEEEEET-TEEE----EEEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred             Cc--eeEeCCCcEEEEEEecCCCCCceEEEEEC-CcEe----ecccCCceEEECcCCcccCEEEEEEEEeCCCceecCcE
Confidence            55  678899999999999765 6689999999 5543    12235678999999  699999999999 445566677


Q ss_pred             EEEEE
Q psy8771         187 IVKVQ  191 (904)
Q Consensus       187 ~l~v~  191 (904)
                      .|.|.
T Consensus       169 ~l~V~  173 (204)
T 3sgj_C          169 QITIT  173 (204)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            88887

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}

Probab=98.96  E-value=3.3e-09  Score=88.14  Aligned_cols=91  Identities=20%  Similarity=0.199  Sum_probs=71.4

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .|.+|.+|++..++.++++|+|..+...++.+..|+|+|.....   ........+.++|.||+|++.|.|.|+|+....
T Consensus         7 ~Ps~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~---~~~~~~~~t~~~i~gL~PgT~Y~~~V~A~~~~~   83 (104)
T 2dle_A            7 GAIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD---SSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDI   83 (104)
T ss_dssp             SCCBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC---EEEEEESSSEEECCSCCSSCEEEEEEEEESSSC
T ss_pred             CCCCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC---eEEEcCCCCEEEECCCCCCCEEEEEEEEEECCc
Confidence            56789999999999999999999876666777899999986532   223344567999999999999999999997655


Q ss_pred             CCCCCCCeeEEecCC
Q psy8771         700 EGATTPPIPVRTKQY  714 (904)
Q Consensus       700 ~~~~s~~~~~~t~~~  714 (904)
                      ++.+ ..+.+.|.+.
T Consensus        84 ~~~p-~~~~~~T~p~   97 (104)
T 2dle_A           84 EGTP-GFLQVHTPPV   97 (104)
T ss_dssp             CCBC-EEEEEECCCC
T ss_pred             ccCC-eeEEEEccCC
Confidence            5443 3566777654

>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*

Probab=98.96  E-value=1.2e-08  Score=100.48  Aligned_cols=156  Identities=13%  Similarity=0.164  Sum_probs=88.1

Q ss_pred             eEEecCCCeEEEEEEccCCCCe---EEEeeCCccccC---------------CCCcee-----------ecceEEEEeee
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPF---VKWRKGQNIELT---------------PDDKLP-----------VGRNVLTLDRV  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~---i~W~k~~~~~~~---------------~~~~~~-----------~~~~~l~i~~l  165 (904)
                      +.+..|++++|.|.+.|.|.+.   |+|+|+++..+.               ...+..           ..+.+|.|.++
T Consensus        11 V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v   90 (225)
T 4fmk_A           11 VRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGL   90 (225)
T ss_dssp             EEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSC
T ss_pred             EEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccC
Confidence            8889999999999999988764   799997443210               011111           23568999999


Q ss_pred             --cCCeEEEEEEEecCcceEEEE-EEEEEeecCCCCC-CCC----CC-c--ceE-EEeecCCeEEEEEeCCCccceEEEE
Q psy8771         166 --TESENYTCIAASVLGVIETST-IVKVQCKYAPLLT-LPV----AP-L--DVK-ISEVTATSVRLDWTYPSETLLYYVI  233 (904)
Q Consensus       166 --~d~g~Y~c~a~n~~g~~~~~~-~l~v~~~~~~~~~-~P~----~p-~--~l~-~~~~~~~sv~l~W~~~~~~~~~y~v  233 (904)
                        +|+|.|+|.|.|..|...... .+.+..  .+... .+.    .. .  .+. +.........+.|...+........
T Consensus        91 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~  168 (225)
T 4fmk_A           91 RVEDEGNYTCEFATFPNGTRRGVTWLRVIA--QPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQ  168 (225)
T ss_dssp             CGGGCEEEEEEEEEETTEEEEEEEEEEEEB--CCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEE
T ss_pred             CHHHCcceEEEEEeCCCcceeeeeeeeeec--CCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcc
Confidence              699999999999877644433 333331  00000 000    00 0  000 1111222334444443222211111


Q ss_pred             EEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         234 QYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ....  .+..+     .....|.|..+...+.+.|+|.|.|..|..
T Consensus       169 ~~~~--~~~~~-----~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~  207 (225)
T 4fmk_A          169 EPGI--QAGTV-----TIISRYSLVPVGRADGVKVTCRVEHESFEE  207 (225)
T ss_dssp             EECS--STTCE-----EEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred             eEEe--cCCCE-----EEEEEEEEeeCCHHHCCEEEEEEEcCCCCe
Confidence            1110  11111     112468999999999999999999987754

>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}

Probab=98.96  E-value=1.9e-09  Score=94.33  Aligned_cols=81  Identities=19%  Similarity=0.267  Sum_probs=65.7

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcccc-------CCCCceee-----cceEEEEeee--cCCeEEEEE
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIEL-------TPDDKLPV-----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~-------~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ..+.+ +.+.+|++++|.|.+.|.|.+.|.|+++++..+       ....|+.+     ...+|.|.++  +|+|.|+|.
T Consensus         6 ~~~~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~   84 (124)
T 3rbg_A            6 NHTET-ITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCL   84 (124)
T ss_dssp             CSEEE-EEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred             CCCcc-EEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEE
Confidence            33445 899999999999999999999999998744332       13445443     2478999999  699999999


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.|. |.....+.|.|.
T Consensus        85 a~n~-g~~~~~~~l~V~  100 (124)
T 3rbg_A           85 HYSD-SVSTKEVKVIVL  100 (124)
T ss_dssp             EESS-SEEEEEEEEEEE
T ss_pred             EEcC-CCCcEEEEEEEE
Confidence            9999 888899999988

>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.96  E-value=4.3e-10  Score=93.29  Aligned_cols=83  Identities=22%  Similarity=0.382  Sum_probs=66.5

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      ..+|.|...|.+ ..+.+|+.++|.|.+.|.|.+.|.|+|+ +..+...     .+..|.|.++  +|+|.|+|.|.|..
T Consensus         8 ~~~~~i~~~p~~-~~v~~G~~v~l~C~~~g~p~~~v~W~k~-~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~   80 (96)
T 2ens_A            8 LEEVQLVVEPEG-GAVAPGGTVTLTCEVPAQPSPQIHWMKD-GVPLPLP-----PSPVLILPEIGPQDQGTYSCVATHSS   80 (96)
T ss_dssp             CCSCCCEEESTT-SEECTTCEEEEECCCSSCSSCCCCCEES-SSBCSSC-----CCSEEEEESCCTTTCEEEECEECCSS
T ss_pred             CCCCEEEECCCC-CEEcCCCeEEEEEEEccCCCCEEEEEEC-CEECcCC-----CCCEEEECCCCcccCEEEEEEEEeCC
Confidence            456778888877 8899999999999999999999999998 6555432     4568999999  69999999999977


Q ss_pred             cceEEEEEEEEE
Q psy8771         180 GVIETSTIVKVQ  191 (904)
Q Consensus       180 g~~~~~~~l~v~  191 (904)
                      |....+..+.+.
T Consensus        81 ~~~~~s~~~~v~   92 (96)
T 2ens_A           81 HGPQESRAVSIS   92 (96)
T ss_dssp             CCCEECCCEEEE
T ss_pred             CCcEEEEEEEEE
Confidence            664444444433

>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*

Probab=98.95  E-value=8.9e-09  Score=102.61  Aligned_cols=84  Identities=17%  Similarity=0.213  Sum_probs=61.2

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCc-cc---c---------CCCCceee----cceEEEEeee--cC
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN-IE---L---------TPDDKLPV----GRNVLTLDRV--TE  167 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~-~~---~---------~~~~~~~~----~~~~l~i~~l--~d  167 (904)
                      +...|.. +.+.+|++++|.|.+.|.|.+.|.|+|+.. ..   +         ....|+..    ...+|.|.++  +|
T Consensus         4 v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D   82 (242)
T 2znx_A            4 LTQSPAT-LSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED   82 (242)
T ss_dssp             EEEECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred             EEEcCCe-EEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence            5555666 899999999999999999999999998521 11   1         01345543    2458999999  69


Q ss_pred             CeEEEEEEEecCcc-eEEEEEEEEE
Q psy8771         168 SENYTCIAASVLGV-IETSTIVKVQ  191 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~-~~~~~~l~v~  191 (904)
                      +|.|.|.+.|..+. ......|.|.
T Consensus        83 ~G~Y~C~~~n~~~~~~~~~~~L~V~  107 (242)
T 2znx_A           83 FGMYFCQQSNSXPYTFGGGTKLEIT  107 (242)
T ss_dssp             CEEEEEEECSSSSCEECCCEEEEEC
T ss_pred             CEEEEEeEecCCceEECCCEEEEEc
Confidence            99999999997653 2234566766

>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A

Probab=98.95  E-value=5.7e-09  Score=104.91  Aligned_cols=167  Identities=14%  Similarity=0.161  Sum_probs=97.5

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeCC-cccc-----------------CCCCceeec------ceEEE
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NIEL-----------------TPDDKLPVG------RNVLT  161 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~~~-----------------~~~~~~~~~------~~~l~  161 (904)
                      +..|.. +.+.+|++++|.|.+.|.+  .+.|.|+|.. +..+                 ....|+.+.      ..+|.
T Consensus         5 ~~~p~~-~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~   83 (253)
T 3uzq_A            5 LEQSGA-ELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH   83 (253)
T ss_dssp             EEECCC-EEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred             EecCCC-eeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence            344556 8899999999999999965  6789999821 2111                 011344431      33599


Q ss_pred             Eeee--cCCeEEEEEEEecCcce-EEEEEEEEEee-----------cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCcc
Q psy8771         162 LDRV--TESENYTCIAASVLGVI-ETSTIVKVQCK-----------YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET  227 (904)
Q Consensus       162 i~~l--~d~g~Y~c~a~n~~g~~-~~~~~l~v~~~-----------~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~  227 (904)
                      |.++  +|+|.|.|.|.|..+.. .....|.|...           ..+.......|..+.+  ....+++|.+...+.+
T Consensus        84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v--~~G~~v~L~C~~~~~~  161 (253)
T 3uzq_A           84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAV--SLGQRATISCRASENV  161 (253)
T ss_dssp             ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEE--CTTSCEEEEEEESSCC
T ss_pred             eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEE--eCCCCEEEEEEecCcc
Confidence            9999  79999999999966553 34566666610           0000000011222222  2345666666654322


Q ss_pred             ce--EEEEEEEeCCCC------------------CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         228 LL--YYVIQYKPKAAN------------------TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       228 ~~--~y~v~~~~~~~~------------------~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      ..  .+.+.|.....+                  ..+..........|+|.++++.+.+.|.|.|.|..+
T Consensus       162 ~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~  231 (253)
T 3uzq_A          162 DRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVP  231 (253)
T ss_dssp             EETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred             ccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCC
Confidence            21  123444332111                  112211222345799999999999999999998654

>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A

Probab=98.95  E-value=3.5e-09  Score=90.08  Aligned_cols=83  Identities=19%  Similarity=0.360  Sum_probs=67.9

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec-c---eEEEEeee--cCCeEEEEE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG-R---NVLTLDRV--TESENYTCI  174 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-~---~~l~i~~l--~d~g~Y~c~  174 (904)
                      ...||.|...+.+ +.+.+|+.++|.|.+.|.  |.|.|+|+ +..+..+.++.+. +   ..|.|.++  +|+|.|+|.
T Consensus         5 ~~~pp~~~~~~~~-~~v~~G~~v~l~C~~~~~--p~v~W~k~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~   80 (108)
T 2dm7_A            5 SSGPARFTQDLKT-KEASEGATATLQCELSKV--APVEWKKG-PETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCM   80 (108)
T ss_dssp             SCCCCCBCSCCBC-CEEETTSCEEEEEEBSSS--CCCEEESS-SSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEE
T ss_pred             cCCCCeeeecCCc-EEEeCCCcEEEEEEeCCC--CeeEEEEC-CEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEE
Confidence            3578999988888 999999999999999886  67999999 7777666666542 2   25999999  699999999


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.    .....+.|.|.
T Consensus        81 a~----n~~~~~~l~V~   93 (108)
T 2dm7_A           81 CG----QERTSATLTVR   93 (108)
T ss_dssp             ET----TEEEEEECEEE
T ss_pred             Ec----CCEEEEEEEEe
Confidence            94    45677888887

>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*

Probab=98.95  E-value=8.8e-09  Score=97.64  Aligned_cols=74  Identities=20%  Similarity=0.317  Sum_probs=61.5

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      +.+..|++++|.|.+ |.|.|  .|.|.+. ...+ ...+.......|.|.++  +|+|.|.|.|.|..|.....+.|.|
T Consensus        17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~-~~~l-~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV   93 (210)
T 1gsm_A           17 VAVALGASRQLTCRL-ACADRGASVQWRGL-DTSL-GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLV   93 (210)
T ss_dssp             EEEETTCCEEEEEEE-CCSSTTCEEEEESS-TTTT-CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred             eEEeCCCCEEEEEEC-CCCCCCcceEEeec-cccc-CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEE
Confidence            799999999999999 99988  9999996 4334 21222345678999999  4999999999999988888889998


Q ss_pred             E
Q psy8771         191 Q  191 (904)
Q Consensus       191 ~  191 (904)
                      .
T Consensus        94 ~   94 (210)
T 1gsm_A           94 Y   94 (210)
T ss_dssp             E
T ss_pred             E
Confidence            8

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1

Probab=98.95  E-value=7e-09  Score=84.04  Aligned_cols=85  Identities=22%  Similarity=0.395  Sum_probs=69.0

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .|.+|.+|.+...+.+++.|+|.++.. ++.+.+|+|++  . + .  ........++.+.+|.|++.|.|+|+|+|..|
T Consensus         3 ~P~~P~~l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~~--~-~-~--~~~~~~~~~~~~~~L~~~t~Y~~~V~A~n~~G   75 (88)
T 1k85_A            3 APTAPTNLASTAQTTSSITLSWTASTD-NVGVTGYDVYN--G-T-A--LATTVTGTTATISGLAADTSYTFTVKAKDAAG   75 (88)
T ss_dssp             SCCCCEEEEEEEECSSCEEEEEECCSC-CSSEEEEEEEE--S-S-S--EEEEESSSEEEECCCCSSCEEEEEEEEEETTT
T ss_pred             CcCCCCccEEEeccCCEEEEEECCCCC-CCCccEEEEEE--C-C-E--EEeecCCCEEEeCCCCCCCEEEEEEEEEeCCC
Confidence            577899999999999999999998865 34599999984  1 1 1  22233457899999999999999999999999


Q ss_pred             C-CCCCCCeeEEe
Q psy8771         700 E-GATTPPIPVRT  711 (904)
Q Consensus       700 ~-~~~s~~~~~~t  711 (904)
                      . |..|..+.++|
T Consensus        76 ~~s~~S~~v~v~T   88 (88)
T 1k85_A           76 NVSAASNAVSVKT   88 (88)
T ss_dssp             EECCCCCCEEEEC
T ss_pred             CcCCCCCCEEEEC
Confidence            8 77888887765

>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A

Probab=98.95  E-value=5.2e-09  Score=102.89  Aligned_cols=155  Identities=14%  Similarity=0.099  Sum_probs=92.2

Q ss_pred             eEEecCCCeEEEEEEccCCC-----CeEEEeeCC--------ccccC------CCCceee-------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM-----PFVKWRKGQ--------NIELT------PDDKLPV-------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~-----p~i~W~k~~--------~~~~~------~~~~~~~-------~~~~l~i~~l--~  166 (904)
                      +.+.+|+++.|.|.+.|.|.     +.|.|+|++        +....      ...|...       ++.+|.|.++  +
T Consensus        11 v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~   90 (222)
T 3sbw_C           11 YVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQ   90 (222)
T ss_dssp             EEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGG
T ss_pred             EEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccc
Confidence            88999999999999998884     489999972        11110      1133332       2358999999  6


Q ss_pred             CCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEE--EeecCCeEEEEEeCCCccceEEEEEEEeCCCCC--
Q psy8771         167 ESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKI--SEVTATSVRLDWTYPSETLLYYVIQYKPKAANT--  242 (904)
Q Consensus       167 d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~--~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~--  242 (904)
                      |+|.|+|.|.| .|.....+.|.|.       .+|..|. +.+  .......++|.+...+.+..  .|.|...++..  
T Consensus        91 D~G~Y~C~~~~-~~~~~~~~~l~V~-------~~~~~~~-~~~~~~~~~g~~v~L~C~~~g~P~p--~i~W~~~~g~~~~  159 (222)
T 3sbw_C           91 DAGVYRCMISY-GGADYKRITVKVN-------APYNKIN-QRILVVDPVTSEHELTCQAEGYPKA--EVIWTSSDHQVLS  159 (222)
T ss_dssp             GCEEEEEEEES-SSEEEEEEEEEEE-------BCCCCCE-EEEEEEETTTTEEEEEEEEEEBSCC--EEEEEETTCCEEC
T ss_pred             cCeEEEEEEEe-CCCceeEEEEEEE-------CCCCCCC-ceeeeeecCCCcEEEEEEecCCCCC--eEEEEECCCceec
Confidence            99999999999 6667777888887       3443332 222  22334567777765432222  35555432110  


Q ss_pred             CeEE--eecceeceEE---EcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         243 PYSE--ISGIITTYYT---VRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       243 ~~~~--~~~~~~~~~~---i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ....  ........+.   +..+...+.+.|+|.|.|..|...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~  202 (222)
T 3sbw_C          160 GKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEEN  202 (222)
T ss_dssp             CEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEE
T ss_pred             CccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCcccee
Confidence            0000  1011111111   113345677899999999988643

>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*

Probab=98.94  E-value=3.4e-09  Score=107.45  Aligned_cols=214  Identities=13%  Similarity=0.078  Sum_probs=121.4

Q ss_pred             CCCCcEEEecc-CCc--eEEEEeCCCCC--------CCceecccc---cccccce--EEEEeeeccCCeeeeeeeeccCC
Q psy8771          36 APRDVQVRPLS-SST--MVIQWDEPETP--------NGQITHPPT---RAARSHA--RLAAQSVLRRGRLAHAVRQVADP   99 (904)
Q Consensus        36 ~p~~l~~~~~~-~~s--~~v~W~~~~~~--------~g~i~~~~~---~~~~~~~--~~~~~~~~~~g~~~~~~~~v~~~   99 (904)
                      ....|.|...+ .+.  +.|.|.+....        ++.+.....   ...+.+.  ..|...+........+.+.+.. 
T Consensus        19 ~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~-   97 (265)
T 2oz4_A           19 TQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS-   97 (265)
T ss_dssp             EEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred             CCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeC-
Confidence            45566666655 444  49999875321        222222212   2233333  3343333333333444555532 


Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                        ..+|.+..  .+ ..+.+|+.++|.|.+.  |.+.|+|  + |..+....    ..+.|.|..+  +|+|.|+|.|.|
T Consensus        98 --~p~p~~~~--~~-~~v~~G~~v~l~C~~~--p~~~i~W--~-g~~~~~~~----~~~~l~i~~~~~~~~g~Y~C~a~n  163 (265)
T 2oz4_A           98 --FPAPNVIL--TK-PEVSEGTEVTVKCEAH--PRAKVTL--N-GVPAQPLG----PRAQLLLKATPEDNGRSFSCSATL  163 (265)
T ss_dssp             --CCCCEEEE--SC-SEEETTCEEEEEEECC--TTSEEEE--S-SCSSSCCS----SEECCEEECCGGGTTEEEEEEEEE
T ss_pred             --CCCceeec--CC-ceecCCCcEEEEEEcc--CCCEEEE--C-CEEccCCC----CcEEEEEccccccCCceEEEEEEc
Confidence              22356653  34 6788999999999999  9999999  5 55552211    3456778777  588899999985


Q ss_pred             cC-cceE---EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceec
Q psy8771         178 VL-GVIE---TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITT  253 (904)
Q Consensus       178 ~~-g~~~---~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~  253 (904)
                      .. |...   ....|.|..  .|.......|.++.+..  ...++|.+...+.+..  .+.|...+.    ......   
T Consensus       164 ~~~g~~~~~s~~~~l~V~~--~p~~~~~~~p~~~~v~~--g~~~~l~C~~~g~P~p--~i~W~~~~~----~~~~~g---  230 (265)
T 2oz4_A          164 EVAGQLIHKNQTRELRVLY--GPRLDERDCPGNWTWPE--NSQQTPMCQAWGNPLP--ELKCLKDGT----FPLPIG---  230 (265)
T ss_dssp             ECSSSEEEEEEEEEEEEEE--EEECCGGGSCSEEEEET--TCEECCCCCCEEESCC--EEEEEETTT----EECCTT---
T ss_pred             CCCCCcccccccEEEEEEe--CCccccccCCCccEEcC--CCeEEEEeECccCCCC--eEEEEECCc----ccCCCC---
Confidence            44 7655   566677763  22222223344554433  4566666664433332  244544432    111111   


Q ss_pred             eEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         254 YYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       254 ~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      .  +..+...+.+.|+|.|.|..|..
T Consensus       231 ~--~~~v~~~d~G~Y~C~a~N~~G~~  254 (265)
T 2oz4_A          231 E--SVTVTRDLEGTYLCRARSTQGEV  254 (265)
T ss_dssp             S--CEECCGGGCEEEEEEEEETTEEE
T ss_pred             c--EEEeehhhCeEEEEEEECCCCcE
Confidence            1  12377789999999999988864

>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X

Probab=98.94  E-value=2.8e-09  Score=93.15  Aligned_cols=76  Identities=29%  Similarity=0.321  Sum_probs=60.5

Q ss_pred             eEEecCCCeEEEEEEccCC--CCeEEEeeCCccccC------CCCc-e-----eecceEEEEeee--cCCeEEEEEEEec
Q psy8771         115 LEVMLDSPLNLSCVAVGSP--MPFVKWRKGQNIELT------PDDK-L-----PVGRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~~~~~~------~~~~-~-----~~~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      +.+.+|+.+.|.|.+.|.|  .+.|.|+++ +..+.      .... .     ....+.|.|.++  +|+|.|+|.|.|.
T Consensus        18 v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~   96 (122)
T 3s35_X           18 IELSVGEKLVLNCTARTELNVGIDFNWEYP-SSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG   96 (122)
T ss_dssp             EEEEETCCEEEEEEEEECTTCCCEEEEECS-CTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECS
T ss_pred             EEEecCCeEEEEEEEEcCCCCcEEEEEECC-CcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccC
Confidence            7899999999999999954  578999998 44321      1111 1     124568999999  6999999999999


Q ss_pred             CcceEEEEEEEEE
Q psy8771         179 LGVIETSTIVKVQ  191 (904)
Q Consensus       179 ~g~~~~~~~l~v~  191 (904)
                      .|...+.+.|.|.
T Consensus        97 ~g~~~~~~~l~V~  109 (122)
T 3s35_X           97 LMTKKNSTFVRVH  109 (122)
T ss_dssp             SCEEEEEEEEEEE
T ss_pred             CCceEEEEEEEEe
Confidence            9999999999988

>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G

Probab=98.93  E-value=2.5e-09  Score=103.93  Aligned_cols=144  Identities=19%  Similarity=0.227  Sum_probs=95.7

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC----------------------CCceecccccccccceEEEEeeeccCCee--ee
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP----------------------NGQITHPPTRAARSHARLAAQSVLRRGRL--AH   91 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~----------------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~--~~   91 (904)
                      ....|.|...+.+...|.|.+....                      ++.+....+...|.....|...+......  ..
T Consensus        20 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~   99 (209)
T 1nbq_A           20 NPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVK   99 (209)
T ss_dssp             CCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEETTSSCEECCE
T ss_pred             CCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEecCCCCccceEE
Confidence            5666777777778899999765322                      12233333444455555565555432222  22


Q ss_pred             eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCCCCc---------eee--cceE
Q psy8771          92 AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTPDDK---------LPV--GRNV  159 (904)
Q Consensus        92 ~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~---------~~~--~~~~  159 (904)
                      +.+.+     ..+|.+...+.. ..+..|+.+.|.|.+ .|.|.|.|.|+++ +..+....+         +..  ..+.
T Consensus       100 ~~l~V-----~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (209)
T 1nbq_A          100 VKLIV-----LVPPSKPTVNIP-SSATIGNRAVLTCSEQDGSPPSEYTWFKD-GIVMPTNPKSTRAFSNSSYVLNPTTGE  172 (209)
T ss_dssp             EECCE-----EBCCCCCCCCCB-SEEETTSCEEECCCCCSCBSCCEEEEEET-TCCCCSCSSSSSSCTTCCCCCCTTTCC
T ss_pred             EEEEE-----ecCCcCCCcccc-cceecCCEEEEEEeCCCCCCCceeEEEEC-CeeCCCccccceeeeccceEEcCCcce
Confidence            33333     345655555555 678999999999997 8999999999999 655554322         222  5678


Q ss_pred             EEEeee--cCCeEEEEEEEecCcceEEEE
Q psy8771         160 LTLDRV--TESENYTCIAASVLGVIETST  186 (904)
Q Consensus       160 l~i~~l--~d~g~Y~c~a~n~~g~~~~~~  186 (904)
                      |.|.++  +|+|.|+|.|.|..|....+.
T Consensus       173 L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~  201 (209)
T 1nbq_A          173 LVFDPLSASDTGEYSCEARNGYGTPMTSN  201 (209)
T ss_dssp             EEESSCCGGGCCCEEEEEECSSSCCEECC
T ss_pred             EEEEeccccCCeEEEEEEeCCcCcccccc
Confidence            999998  699999999999999874443

>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L

Probab=98.93  E-value=1.1e-08  Score=104.17  Aligned_cols=170  Identities=15%  Similarity=0.159  Sum_probs=99.0

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcc----cc---------CCCCceee----cceEEEEeee-
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI----EL---------TPDDKLPV----GRNVLTLDRV-  165 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~----~~---------~~~~~~~~----~~~~l~i~~l-  165 (904)
                      .+.|...|.. +.+.+|++++|.|.+.|.|.+.|.|+|++..    .+         ....|+..    +..+|.|.++ 
T Consensus        12 ~~~v~~~p~~-~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~   90 (276)
T 3auv_A           12 DIQMTQSPSS-LSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ   90 (276)
T ss_dssp             CCCEEEECSE-EECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred             ceeEEeCCCe-EEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC
Confidence            3456666766 8999999999999999999999999985321    11         11345543    2348999999 


Q ss_pred             -cCCeEEEEEEEecCcc-eEEEEEEEEEeecCCC---C---CCC----CCCcceEEEeecCCeEEEEEeCCCccceEEEE
Q psy8771         166 -TESENYTCIAASVLGV-IETSTIVKVQCKYAPL---L---TLP----VAPLDVKISEVTATSVRLDWTYPSETLLYYVI  233 (904)
Q Consensus       166 -~d~g~Y~c~a~n~~g~-~~~~~~l~v~~~~~~~---~---~~P----~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v  233 (904)
                       +|+|.|.|.|.|..+. ....+.|.|.......   .   ..|    ..|.++.+  ....+++|.+...+.+.....|
T Consensus        91 ~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v--~~G~~v~L~C~~~g~~~~~~~v  168 (276)
T 3auv_A           91 PEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLV--QPGGSLRLSCAASGFTISDYWI  168 (276)
T ss_dssp             GGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEE--CTTCCEEEEEEEESSCGGGSEE
T ss_pred             hhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEe--cCCCeEEEEEEecCccCCCCEE
Confidence             6999999999997654 2334567766210000   0   000    01112222  2234555555543221111123


Q ss_pred             EEEeCCC-----------------------CCCeEEee--cceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771         234 QYKPKAA-----------------------NTPYSEIS--GIITTYYTVRNLSPYTEYEFYIIAVNNL  276 (904)
Q Consensus       234 ~~~~~~~-----------------------~~~~~~~~--~~~~~~~~i~~L~p~~~Y~~~v~a~n~~  276 (904)
                      .|.....                       ...+....  ......+.|.+++..+.+.|.|.|.|..
T Consensus       169 ~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~  236 (276)
T 3auv_A          169 HWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFF  236 (276)
T ss_dssp             EEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred             EEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCc
Confidence            3322211                       11222111  1223479999999999999999999974

>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B

Probab=98.93  E-value=2.6e-09  Score=99.49  Aligned_cols=142  Identities=11%  Similarity=0.131  Sum_probs=89.5

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-----------CCCceee--cceEEEEeee--cCCeEEEEEEEecC
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-----------PDDKLPV--GRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-----------~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      +.+.+|++++|.|.+.+ |.+.|.|+|++.....           ...|+..  .+++|.|.++  +|+|.|+|.|.|..
T Consensus         5 v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~   83 (171)
T 1ccz_A            5 IYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNIT   83 (171)
T ss_dssp             EEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCC
T ss_pred             EEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCC
Confidence            78899999999999855 8899999998432110           1234444  5689999999  69999999999988


Q ss_pred             cceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcC
Q psy8771         180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRN  259 (904)
Q Consensus       180 g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~  259 (904)
                      |  .....|.|.       .++..|. +... ...  ..|.+...+.+...  +.|...+  ....   ......+.+.+
T Consensus        84 ~--~~~~~L~V~-------~~~~~p~-i~~~-~~~--~~L~C~~~~~p~p~--i~W~~~~--~~l~---~~~~~~l~~~~  143 (171)
T 1ccz_A           84 D--TMKFFLYVL-------EMVSKPM-IYWE-CSN--ATLTCEVLEGTDVE--LKLYQGK--EHLR---SLRQKTMSYQW  143 (171)
T ss_dssp             S--CEEEEEEEE-------CCCCCCE-EEEE-TTT--TEEEEECSSCSSCE--EEEEETT--EEEE---EESSSEEEEEC
T ss_pred             C--cEEEEEEEE-------CcCCCCE-EEEe-cCC--cEEEEEeCCCCCcE--EEEEECC--EECc---CCcceEEEEec
Confidence            8  677788887       4444442 2111 111  25566554333332  3343321  1111   11123344443


Q ss_pred             CCCCCeEEEEEEEEcCCCCC
Q psy8771         260 LSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       260 L~p~~~Y~~~v~a~n~~g~s  279 (904)
                        .++.+.|+|.|.|..|..
T Consensus       144 --~~~~g~Y~C~a~N~~~~~  161 (171)
T 1ccz_A          144 --TNLRAPFKCKAVNRVSQE  161 (171)
T ss_dssp             --SCCSSCEEEEEEETTEEE
T ss_pred             --cCCCceEEEEEEcccCcc
Confidence              667789999999998753

>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3

Probab=98.93  E-value=5.6e-09  Score=97.92  Aligned_cols=111  Identities=14%  Similarity=0.085  Sum_probs=72.5

Q ss_pred             CCceecccccccccceEEEEeeeccCCe--eeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEE
Q psy8771          61 NGQITHPPTRAARSHARLAAQSVLRRGR--LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVK  138 (904)
Q Consensus        61 ~g~i~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~  138 (904)
                      +|.++...+...|...+.|...+.....  ...+.+.|...  ...|.+         ...+..++|.|.+.|.|.|.|+
T Consensus        60 ~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~--~~~p~i---------~~~~~~v~L~C~~~g~p~p~i~  128 (176)
T 1hng_A           60 NGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEM--VSKPMI---------YWECSNATLTCEVLEGTDVELK  128 (176)
T ss_dssp             TSCEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECC--CCCCEE---------EEETTTTEEEEECSSCSSCEEE
T ss_pred             CCcEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCC--CCCCEE---------EecCCcEEEEEEecCCCCcEEE
Confidence            4555555556666666666666554443  33445554421  122332         2345679999999999999999


Q ss_pred             EeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         139 WRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       139 W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      |+|+ +..+....+       +.|.++  +|+|.|+|.|.|..|...+.+.|.+
T Consensus       129 W~~~-g~~l~~~~~-------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~  174 (176)
T 1hng_A          129 LYQG-KEHLRSLRQ-------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC  174 (176)
T ss_dssp             EEET-TEEEEEESS-------SEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred             EEEC-CEECCCCCc-------EEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence            9999 655543222       344455  7999999999999998887765543

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*

Probab=98.92  E-value=4.4e-08  Score=93.64  Aligned_cols=178  Identities=12%  Similarity=0.131  Sum_probs=112.4

Q ss_pred             cceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcc--cc---c-eE-EecccceEEEeC--CCCCcEEEEEEEEE
Q psy8771         625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK--AK---H-HR-RIGLVETYSLTG--LYPNTLYYIWLAAQ  695 (904)
Q Consensus       625 ~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~--~~---~-~~-~~~~~~~~~l~~--L~p~t~Y~v~V~a~  695 (904)
                      .+|.-.......++.+|.+..  ......|.+.|+.....  ..   . .. ..+....+.+..  +.....|.|.|.+ 
T Consensus         3 ~nl~C~~~~~~~~~C~W~~~~--~~~~~~y~l~y~~~~~~~~~~~~C~~y~~~~~~~~~C~~~~~~~~~~~~~~i~v~~-   79 (199)
T 2b5i_C            3 PEVQCFVFNVEYMNCTWQSSS--EPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD-   79 (199)
T ss_dssp             CCCEEEEETTTEEEEECCCCS--SSSCCCCEEEEEETTSSSCCCEECSSEEEETTEEEEEEEEGGGCCTTSCEEEEEEC-
T ss_pred             CcCEEEECCCcEEEEEecCCC--cCCCceEEEEEEECCCCCCccccCCCccccCCceeEEEECCcccccceEEEEEEEe-
Confidence            455555567789999999864  12246788888754321  11   1 01 112234555544  4455688888863 


Q ss_pred             cCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcc
Q psy8771         696 SPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT  775 (904)
Q Consensus       696 ~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~  775 (904)
                       ..|.. .+....+.....+.+.||.+|++.....+.+.|+|+.|..   .. ...|+|+|+...+..+  ....+...+
T Consensus        80 -~~g~~-~s~~~~~~~~~iVkP~pP~~l~~~~~~~~~l~l~W~~p~~---~~-~l~yev~y~~~~~~~w--~~~~~~~~~  151 (199)
T 2b5i_C           80 -PREPR-RQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL---NH-CLEHLVQYRTDWDHSW--TEQSVDYRH  151 (199)
T ss_dssp             -SSCTT-CEEEEEECGGGSEECCCCEEEEEEEEETTEEEEEEECSSC---ST-TCEEEEEEEETTCSSC--EEEEECSSC
T ss_pred             -CCcce-ecceEEEchHHceecCCCcEEEEEECCCCCEEEEECCCCC---CC-ceEEEEEEeecCCccc--EEEeccCce
Confidence             33321 2223344444444344789999988777899999999842   22 3489999998765444  333333678


Q ss_pred             eEEecCCCCCceEEEEEEEeeCCC------CCCCCCcEEeecCC
Q psy8771         776 SFVLDELKKWTEYRIWVLAGTSIG------DGPSSYPITIRTHE  813 (904)
Q Consensus       776 ~~~i~~L~p~t~Y~~~V~a~~~~g------~g~~s~~~~~~t~~  813 (904)
                      .+.|.+|.|++.|.|+|||....|      .|++|.++.+.|..
T Consensus       152 ~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~~  195 (199)
T 2b5i_C          152 KFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNT  195 (199)
T ss_dssp             EEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC----
T ss_pred             EEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCCc
Confidence            999999999999999999998542      46778788777643

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=5.4e-10  Score=94.24  Aligned_cols=88  Identities=22%  Similarity=0.327  Sum_probs=72.8

Q ss_pred             CCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE-EeecceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771         198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS-EISGIITTYYTVRNLSPYTEYEFYIIAVNNL  276 (904)
Q Consensus       198 ~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~  276 (904)
                      .+.|.+|.+|++...+.+++.|+|+++.+.+.+|.|.|+.......+. .......+.++|.+|+|++.|.|+|+|.|..
T Consensus         5 ~~~p~~P~~l~v~~~t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~   84 (105)
T 2ekj_A            5 SSGRSPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAIYAA   84 (105)
T ss_dssp             CTTCCCCEEEEEEEEETTEEEEEEECCSSCCSBBCBBCCCTTSCSCCCCBCCBTTSSEEEECSCCSSCCCBCBBCBBCSS
T ss_pred             ccCCCCCCceEEEeCCCCEEEEEEeCCCCcceEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCC
Confidence            478999999999999999999999999888999999998754332221 2233456899999999999999999999999


Q ss_pred             CCCCCCCCe
Q psy8771         277 GRGPPSSPA  285 (904)
Q Consensus       277 g~s~~s~~~  285 (904)
                      |.+.++...
T Consensus        85 g~g~~s~~~   93 (105)
T 2ekj_A           85 GRSEAVSAT   93 (105)
T ss_dssp             CBCCCBCCB
T ss_pred             ccCCccccE
Confidence            998876543

>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}

Probab=98.92  E-value=1.1e-08  Score=100.09  Aligned_cols=155  Identities=12%  Similarity=0.161  Sum_probs=88.3

Q ss_pred             eEEecCCCeEEEEEEccCCCCe---EEEeeCCccccCC------------------CCceee-------cceEEEEeee-
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPF---VKWRKGQNIELTP------------------DDKLPV-------GRNVLTLDRV-  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~---i~W~k~~~~~~~~------------------~~~~~~-------~~~~l~i~~l-  165 (904)
                      +++.+|++++|.|.+.|.|.+.   |+|+|+ +..+..                  ..|+..       .+.+|.|.++ 
T Consensus         9 vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~   87 (218)
T 4frw_A            9 VTVVLGQDAKLPCFYRGDSGEQVGQVAWARV-DAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAV   87 (218)
T ss_dssp             EEEETTSCEEECCEECCCTTCEEEEEEEEEE-CSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCC
T ss_pred             EEEEcCCCEEEEEEEEcCCCCCccEEEEEEC-CCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeecc
Confidence            8999999999999999998764   899997 322211                  112221       2457999999 


Q ss_pred             -cCCeEEEEEEEecCcceEEE-EEEEEEeecCCCCCCCCCCc--ceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC
Q psy8771         166 -TESENYTCIAASVLGVIETS-TIVKVQCKYAPLLTLPVAPL--DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN  241 (904)
Q Consensus       166 -~d~g~Y~c~a~n~~g~~~~~-~~l~v~~~~~~~~~~P~~p~--~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~  241 (904)
                       +|+|.|.|.+.+..+..... ..+.+.       ..+....  ...........+.+.+...+.+..  .|.|...+..
T Consensus        88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p--~i~W~~~~~~  158 (218)
T 4frw_A           88 QADEGEYECRVSTFPAGSFQARLRLRVL-------VPPLPSLNPGPALEEGQGLTLAASCTAEGSPAP--SVTWDTEVKG  158 (218)
T ss_dssp             GGGCEEEEEEEEEETTEEEEEEEEEEEE-------BCCCCEEEECSCEETTCCSEEEEEEEEEEBSCC--EEEEEESSCC
T ss_pred             HHHCCceeEEEEeccCceeeeEEEEEEe-------eeccceeeeeeeeeeeeccccceeeeccCCcCc--eEEEEECCcc
Confidence             69999999999877664433 333333       1111000  000111112233333332211111  2333332211


Q ss_pred             CCeEE-e----ecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         242 TPYSE-I----SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       242 ~~~~~-~----~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..... .    .......|.|..+...+.+.|+|.|.|..|..
T Consensus       159 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~  201 (218)
T 4frw_A          159 TTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQ  201 (218)
T ss_dssp             EEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred             cccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCe
Confidence            11000 0    01123569999999999999999999998764

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}

Probab=98.92  E-value=2.5e-09  Score=92.25  Aligned_cols=84  Identities=24%  Similarity=0.370  Sum_probs=68.0

Q ss_pred             CCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE-EeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS-EISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       199 ~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      ++|.+|.+|++...+.+++.|+|.++...+.+|.|.|...++..... .......+.++|.+|+|++.|.|+|.|.|..|
T Consensus        27 tp~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~~~~v~~~~t~~~l~gL~P~t~Y~~~V~A~~~~G  106 (121)
T 2ocf_D           27 SVSDVPTKLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGLR  106 (121)
T ss_dssp             --CCSCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEETTTCSCBEEEEEETTCCEEEECCCCTTCEEEEEEEEECCHH
T ss_pred             CCCCCCCccEEEecCCCEEEEEEcCCCCCCcEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCC
Confidence            57789999999999999999999999778999999999865433222 22234568999999999999999999999999


Q ss_pred             CCCCC
Q psy8771         278 RGPPS  282 (904)
Q Consensus       278 ~s~~s  282 (904)
                      .+.++
T Consensus       107 ~g~~S  111 (121)
T 2ocf_D          107 LMLAG  111 (121)
T ss_dssp             HHHHS
T ss_pred             ccCCC
Confidence            86543

>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A

Probab=98.92  E-value=1.1e-08  Score=102.40  Aligned_cols=165  Identities=14%  Similarity=0.221  Sum_probs=95.8

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCC-----CCeEEEeeCC-ccc---cC---------CCCceee----cceEEEEee
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSP-----MPFVKWRKGQ-NIE---LT---------PDDKLPV----GRNVLTLDR  164 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p-----~p~i~W~k~~-~~~---~~---------~~~~~~~----~~~~l~i~~  164 (904)
                      +...|.. +.+.+|++++|.|.+.|.|     .+.|.|+|+. +..   +.         ...|+..    +..+|.|.+
T Consensus         4 v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~   82 (247)
T 1svz_A            4 MTQTPLY-LPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR   82 (247)
T ss_dssp             EEEECSE-EEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred             EEecCCe-EEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence            4555666 8999999999999999998     6899999842 111   10         1345543    234899999


Q ss_pred             e--cCCeEEEEEEEecCcc-eEEEEEEEEEeecC----------CCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEE
Q psy8771         165 V--TESENYTCIAASVLGV-IETSTIVKVQCKYA----------PLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYY  231 (904)
Q Consensus       165 l--~d~g~Y~c~a~n~~g~-~~~~~~l~v~~~~~----------~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y  231 (904)
                      +  +|+|.|.|.+.|..+. ....+.|.|.....          +.... ..+....  .....+++|.+...+.+....
T Consensus        83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~--v~~G~~v~L~C~~~~~~~~~~  159 (247)
T 1svz_A           83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQL-QQSGPEL--KKPGETVKISCKATNYAFTDY  159 (247)
T ss_dssp             CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEE-EECCCEE--ECTTCCEEEEEEEESSCGGGS
T ss_pred             CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEE-eCCCcee--ecCCCcEEEEEEEcCcccCCc
Confidence            9  6999999999997654 22345677762110          00000 0011111  223345666665442211111


Q ss_pred             EEEEEeCCC-----------------------CCCeEEee--cceeceEEEcCCCCCCeEEEEEEEEcC
Q psy8771         232 VIQYKPKAA-----------------------NTPYSEIS--GIITTYYTVRNLSPYTEYEFYIIAVNN  275 (904)
Q Consensus       232 ~v~~~~~~~-----------------------~~~~~~~~--~~~~~~~~i~~L~p~~~Y~~~v~a~n~  275 (904)
                      .+.|.....                       ...+....  ......|.|.+++..+.+.|.|.|.|.
T Consensus       160 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~  228 (247)
T 1svz_A          160 SMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH  228 (247)
T ss_dssp             CEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred             EEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence            122222110                       11111111  122358999999999999999999985

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*

Probab=98.92  E-value=2.9e-08  Score=94.97  Aligned_cols=177  Identities=14%  Similarity=0.186  Sum_probs=113.5

Q ss_pred             CeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE-----eecCceEEEEcC--CCCCCeEEEEEEEE
Q psy8771         487 DVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ-----VVDNNQLTTISD--LTPHTIYTIRVQAF  559 (904)
Q Consensus       487 ~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--L~p~t~Y~~~V~a~  559 (904)
                      +|.....+...+..+|++...  .....|.+.|....... ..+..-     ..+....+.+..  +.....|.|.|++ 
T Consensus         4 nl~C~~~~~~~~~C~W~~~~~--~~~~~y~l~y~~~~~~~-~~~~~C~~y~~~~~~~~~C~~~~~~~~~~~~~~i~v~~-   79 (199)
T 2b5i_C            4 EVQCFVFNVEYMNCTWQSSSE--PQPTNLTLHYWYKNSDN-DKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD-   79 (199)
T ss_dssp             CCEEEEETTTEEEEECCCCSS--SSCCCCEEEEEETTSSS-CCCEECSSEEEETTEEEEEEEEGGGCCTTSCEEEEEEC-
T ss_pred             cCEEEECCCcEEEEEecCCCc--CCCceEEEEEEECCCCC-CccccCCCccccCCceeEEEECCcccccceEEEEEEEe-
Confidence            577777777899999998541  22367888877543110 111111     112233455544  4445678888863 


Q ss_pred             eCCCCCCCCCcEEEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEE
Q psy8771         560 TSVGPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVT  638 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~  638 (904)
                       ..|. ..+....+..... .|.||.+|.+.......+.|+|..|..                                 
T Consensus        80 -~~g~-~~s~~~~~~~~~iVkP~pP~~l~~~~~~~~~l~l~W~~p~~---------------------------------  124 (199)
T 2b5i_C           80 -PREP-RRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL---------------------------------  124 (199)
T ss_dssp             -SSCT-TCEEEEEECGGGSEECCCCEEEEEEEEETTEEEEEEECSSC---------------------------------
T ss_pred             -CCcc-eecceEEEchHHceecCCCcEEEEEECCCCCEEEEECCCCC---------------------------------
Confidence             3332 1233344443332 478899999988777899999998841                                 


Q ss_pred             EeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC------CCCCCCCeeEEec
Q psy8771         639 LAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG------EGATTPPIPVRTK  712 (904)
Q Consensus       639 l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G------~~~~s~~~~~~t~  712 (904)
                                .....|.|+|+..++..+........+.+.|.+|.|++.|.|+|+|....|      -|++|.++.+.|.
T Consensus       125 ----------~~~l~yev~y~~~~~~~w~~~~~~~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~  194 (199)
T 2b5i_C          125 ----------NHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN  194 (199)
T ss_dssp             ----------STTCEEEEEEEETTCSSCEEEEECSSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred             ----------CCceEEEEEEeecCCcccEEEeccCceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence                      134589999998766666555555567899999999999999999998542      2566766666654

>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4

Probab=98.91  E-value=3e-08  Score=98.92  Aligned_cols=172  Identities=10%  Similarity=0.119  Sum_probs=106.8

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC---ce--eecceEEEEeee--cCCeEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD---KL--PVGRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~---~~--~~~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ..+|.|...|.  ..+.+|++++|.|.+.+ +.+.+.|+|+ +..+....   +.  ...++.|.|.++  +|+|.|+|.
T Consensus         5 ~~kP~i~~~P~--~~V~~G~~VtL~C~~~~-~~~~~~W~k~-g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~   80 (257)
T 1b6u_A            5 HRKPSLLAHPG--PLVKSEETVILQCWSDV-RFQHFLLHRE-GKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCY   80 (257)
T ss_dssp             CCCCEECCBSC--SEEESSCCEEEEEEESS-CCSEEEEEEE-STTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEE
T ss_pred             CCCCEEEEcCC--CEecCCCCEEEEEecCC-CCcEEEEEEC-CCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEe
Confidence            45678877775  67889999999999985 4678999998 54332110   11  124678999999  699999999


Q ss_pred             EEecCc-----ceEEEEEEEEEeecCCCCCCCCCCcceEE----EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE
Q psy8771         175 AASVLG-----VIETSTIVKVQCKYAPLLTLPVAPLDVKI----SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS  245 (904)
Q Consensus       175 a~n~~g-----~~~~~~~l~v~~~~~~~~~~P~~p~~l~~----~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~  245 (904)
                      +.|..+     ..+..+.|.|.       ..+.+|. +.+    .......++|.+.....+ ..|  .|..++......
T Consensus        81 a~~~~~~~~~s~~S~~~~L~V~-------~~~~~P~-l~~~p~~~V~~G~~vtL~C~~~~~~-~~~--~w~k~g~~~~~~  149 (257)
T 1b6u_A           81 GSVTHSPYQLSAPSDPLDIVIT-------GLYEKPS-LSAQPGPTVLAGESVTLSCSSRSSY-DMY--HLSREGEAHERR  149 (257)
T ss_dssp             EECSSCTTSCCCCCCCEEEEEE-------CSSCCCE-EECSSCTTCBTTCEEEEEEECSSCC-SEE--EEEETTSSCEEC
T ss_pred             EeccCCCccccccCCCEEEecc-------cCCCCcc-eEccCCCccCCCCEEEEEEeCCCCC-cEE--EEEECCcccCcc
Confidence            987532     23455677777       2222221 111    113446788888876443 333  344433221100


Q ss_pred             ----E-eecceeceEEEcCCCCCCeEEEEEEEEcCCC---CCCCCCCeEEecC
Q psy8771         246 ----E-ISGIITTYYTVRNLSPYTEYEFYIIAVNNLG---RGPPSSPAVITTG  290 (904)
Q Consensus       246 ----~-~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g---~s~~s~~~~~~t~  290 (904)
                          . ..+.....|.|.++.  +.+.|+|.|.+...   .+.++.++.+...
T Consensus       150 ~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~  200 (257)
T 1b6u_A          150 FSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVT  200 (257)
T ss_dssp             CBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCB
T ss_pred             cccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEe
Confidence                0 111234679999998  89999999997643   2445666655443

>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.91  E-value=6.7e-09  Score=88.08  Aligned_cols=89  Identities=22%  Similarity=0.338  Sum_probs=70.6

Q ss_pred             CCCCCCCCeEEEecC--CceEEEEecCCCC---CCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEE
Q psy8771         480 EPGTAPRDVQVRPLS--SSTMVIQWDEPET---PNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTI  554 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~--~~~~~l~W~~p~~---~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~  554 (904)
                      +.+.+|.++.+....  .+++.|+|++|..   .++.+..|.|+|+..+..   .|........+++.|.+|.||+.|.|
T Consensus         6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~---~w~~~~~~~~~~~~l~~L~p~t~Y~~   82 (109)
T 1uc6_A            6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILD---QWQHVELSNGTAHTITDAYAGKEYII   82 (109)
T ss_dssp             CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSC---CCCCEEESSCSEEEETTCCSSSCEEE
T ss_pred             EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCC---CcEEEecccCCEEEEeCCCCCCEEEE
Confidence            446899999988764  5899999999864   456789999999988643   45555556678899999999999999


Q ss_pred             EEEEEeCCCCCCCCCcEE
Q psy8771         555 RVQAFTSVGPGPLSAPVL  572 (904)
Q Consensus       555 ~V~a~~~~g~~~~S~~~~  572 (904)
                      +|+|.+. |.|.+|+...
T Consensus        83 ~VRa~~~-g~g~wS~WS~   99 (109)
T 1uc6_A           83 QVAAKDN-EIGTWSDWSV   99 (109)
T ss_dssp             EEECCBS-SSCCCCCCCE
T ss_pred             EEEEEeC-CCCCcCcCCC
Confidence            9999985 7776666543

>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1

Probab=98.91  E-value=3.1e-08  Score=99.12  Aligned_cols=158  Identities=15%  Similarity=0.168  Sum_probs=93.5

Q ss_pred             eEEecCCCeEEEEEEccCC--CCeEEEeeCC-cccc-----------------CCCCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NIEL-----------------TPDDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~~~-----------------~~~~~~~~~------~~~l~i~~l--~  166 (904)
                      +.+.+|++++|.|.+.|.|  .+.|.|+|+. +..+                 ....|+.+.      ..+|.|.++  +
T Consensus        12 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~   91 (247)
T 2ghw_B           12 GVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE   91 (247)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             EEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHH
Confidence            8899999999999999998  6889999842 1110                 112455432      357999999  6


Q ss_pred             CCeEEEEEEEecCcc--eEEEEEEEEEeecCC--------CCCCC---CCCcceEEEeecCCeEEEEEeCCCccceEEEE
Q psy8771         167 ESENYTCIAASVLGV--IETSTIVKVQCKYAP--------LLTLP---VAPLDVKISEVTATSVRLDWTYPSETLLYYVI  233 (904)
Q Consensus       167 d~g~Y~c~a~n~~g~--~~~~~~l~v~~~~~~--------~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v  233 (904)
                      |+|.|.|.|.|..+.  ....+.|.|......        ....+   .+|..+.+  ....+++|.+...+.+..  .|
T Consensus        92 D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~G~~v~L~C~~~~~~~~--~v  167 (247)
T 2ghw_B           92 DTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSL--SPGERATLSCRASQSVRS--NL  167 (247)
T ss_dssp             GCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEE--CTTSCEEEEEEESSCCTT--CE
T ss_pred             HCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEe--cCCCcEEEEEEeCCCccc--eE
Confidence            999999999997433  223456666611000        00000   01222222  234566666665432222  23


Q ss_pred             EEEe--CCCC----------------CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771         234 QYKP--KAAN----------------TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNL  276 (904)
Q Consensus       234 ~~~~--~~~~----------------~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~  276 (904)
                      .|..  .+..                ..+..........|+|.+++..+.+.|.|.|.|..
T Consensus       168 ~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~  228 (247)
T 2ghw_B          168 AWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW  228 (247)
T ss_dssp             EEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred             EEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence            3332  1111                11111112334579999999999999999999853

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A

Probab=98.90  E-value=3e-08  Score=94.48  Aligned_cols=90  Identities=22%  Similarity=0.357  Sum_probs=73.7

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      +.+|.++.+...+.+++.|+|++|.   +.+.+|+|.|........ .-........+++++.+|.|++.|.|+|+|++.
T Consensus       104 ~~~P~~l~v~~~t~~si~l~W~~p~---~~i~~Y~v~y~~~~~~~~-~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~~  179 (195)
T 2qbw_A          104 SSVPTNLEVVAATPTSLLISWDASY---YGVSYYRITYGETGGNSP-VQEFTVPYSSSTATISGLKPGVDYTITVYAYSD  179 (195)
T ss_dssp             CCSSCCCEEEEEETTEEEEECCCCC---SSCSEEEEEEEETTCCSC-CEEEEEETTCSEEEECSCCTTCEEEEEEEEESS
T ss_pred             CCCCcccEEEeCCCCEEEEEEeCCC---CCccEEEEEEEECCCCCc-ceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEeC
Confidence            4577899999999999999999975   568999999988654321 112333466789999999999999999999999


Q ss_pred             CCCCCCCCcEEEec
Q psy8771         562 VGPGPLSAPVLVKT  575 (904)
Q Consensus       562 ~g~~~~S~~~~~~t  575 (904)
                      .|.|+.|..+.+++
T Consensus       180 ~G~g~~S~~v~~~~  193 (195)
T 2qbw_A          180 YYGSHHYSPISINY  193 (195)
T ss_dssp             TTSSCBCCCEEEEE
T ss_pred             CccCCCCCCEEEEe
Confidence            99999998887765

>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*

Probab=98.90  E-value=3.9e-09  Score=102.70  Aligned_cols=161  Identities=15%  Similarity=0.167  Sum_probs=95.3

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cC
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TE  167 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d  167 (904)
                      +.. |.. +.+.+|++++|.|.+.|.|.+.|.|+|+. +..+            ....|+..    +..+|.|.++  +|
T Consensus         4 v~q-p~~-~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D   81 (210)
T 1lk3_L            4 LTQ-PPA-LTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADD   81 (210)
T ss_dssp             EEC-CSE-EEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred             EEC-CCc-EEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHH
Confidence            444 555 89999999999999999999999999842 2111            11245543    2348999999  69


Q ss_pred             CeEEEEEEEecCcceE-EEEEEEEEeecCCCCCCCCCCcceEEEe-----ecCCeEEEEEeCCCccceEEEEEEEeCCCC
Q psy8771         168 SENYTCIAASVLGVIE-TSTIVKVQCKYAPLLTLPVAPLDVKISE-----VTATSVRLDWTYPSETLLYYVIQYKPKAAN  241 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~~~-~~~~l~v~~~~~~~~~~P~~p~~l~~~~-----~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~  241 (904)
                      +|.|.|.|.|..+... ....|.|.       ..+.+|. +.+..     .....++|.+...+.......|.|...+..
T Consensus        82 ~G~Y~C~~~~~~~~~~~~~~~l~V~-------~~~~~P~-v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~  153 (210)
T 1lk3_L           82 TAIYFCQQSWNGPLTFGAGTKLELK-------RADAAPT-VSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTE  153 (210)
T ss_dssp             CEEEEEEECSSSSCEECCCEEEEEC-------CCCBCCE-EEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred             CeEEEEEEEcCCCceeCCCEEEEEc-------CCCcCCe-EEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCcc
Confidence            9999999999877533 23466665       2222221 11111     123355555554311111112444433211


Q ss_pred             C--C-eEE---eecc-----eeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         242 T--P-YSE---ISGI-----ITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       242 ~--~-~~~---~~~~-----~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      .  . ...   ....     ....+.|..+...+.+.|+|.|.|...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~  200 (210)
T 1lk3_L          154 RRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTS  200 (210)
T ss_dssp             CCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred             CCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence            0  1 000   0001     123688888888889999999999754

>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}

Probab=98.90  E-value=2e-08  Score=98.70  Aligned_cols=123  Identities=20%  Similarity=0.282  Sum_probs=80.5

Q ss_pred             eecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeC
Q psy8771          64 ITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKG  142 (904)
Q Consensus        64 i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~  142 (904)
                      +....+...|.....|...+.. .....+.+.|..  ...+|.+...+.  ..+.+|+.++|.|.+ .|.|.|.|.|+++
T Consensus        74 L~I~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~--~~~~p~i~~~~~--~~v~~G~~~~l~C~~~~g~P~~~v~W~~~  148 (222)
T 4i0k_A           74 LRLQRVRVTDEGSYTCFVSIQD-FDSAAVSLQVAA--PYSKPSMTLEPN--KDLRPGNMVTITCSSYQGYPEAEVFWKDG  148 (222)
T ss_dssp             EEECSCCGGGCSCEEEEEEECC-CCCCCCCCCCCB--CCCCCEEECCC-------CCSEEEEEEEEEEEBSCCEEEEECT
T ss_pred             EEECCcccccCEEEEEEEEeCC-CceEEEEEEEEc--CCCCCcEEeCCC--ceecCCceEEEEEecccccCCCeEEEEcC
Confidence            4444455555555666555432 222333343332  234577776664  567789999999999 8999999999996


Q ss_pred             CccccCCCCcee---ecce---EEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         143 QNIELTPDDKLP---VGRN---VLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       143 ~~~~~~~~~~~~---~~~~---~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      ++..+.......   ..++   .|.|.++  +|+|.|+|.|.|..|.....+.|.|.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~  205 (222)
T 4i0k_A          149 QGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTIT  205 (222)
T ss_dssp             TSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred             CCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEe
Confidence            466655433222   1233   3778888  69999999999999999999999887

>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...

Probab=98.90  E-value=3.4e-09  Score=103.43  Aligned_cols=162  Identities=14%  Similarity=0.136  Sum_probs=96.3

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCc-ccc------------CCCCceee----cceEEEEeee--cC
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN-IEL------------TPDDKLPV----GRNVLTLDRV--TE  167 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~-~~~------------~~~~~~~~----~~~~l~i~~l--~d  167 (904)
                      +...|.. +.+.+|+++.|.|.+.|.|.+.|.|+|+.. ..+            ....|+..    ...+|.|.++  +|
T Consensus         4 v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D   82 (213)
T 3d9a_L            4 LTQSPAT-LSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED   82 (213)
T ss_dssp             EEEECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred             EEeCCcc-EEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhh
Confidence            4444555 899999999999999999999999998522 211            11245543    2348999999  69


Q ss_pred             CeEEEEEEEecCcceE-EEEEEEEEeecCCCCCCCCCCcceEEEe-----ecCCeEEEEEeCCCccceEEEEEEEeCCCC
Q psy8771         168 SENYTCIAASVLGVIE-TSTIVKVQCKYAPLLTLPVAPLDVKISE-----VTATSVRLDWTYPSETLLYYVIQYKPKAAN  241 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~~~-~~~~l~v~~~~~~~~~~P~~p~~l~~~~-----~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~  241 (904)
                      +|.|+|.|.|..|... ..+.|.|.       ..+.+|. +.+..     .....++|.+...+.......+.|...+..
T Consensus        83 ~G~Y~C~~~~~~~~~~~~~~~l~V~-------~~~~~p~-v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~  154 (213)
T 3d9a_L           83 FGMYFCQQSNSWPYTFGGGTKLEIK-------RADAAPT-VSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE  154 (213)
T ss_dssp             CEEEEEEECSSSSCEECCCEEEEEC-------CCCBCCE-EEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred             CEEEEEeeecCCcceeCCCEEEEEe-------cCCCCce-eEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCc
Confidence            9999999999877533 23467776       2222222 11111     122355555554311111112334332211


Q ss_pred             --CC-eEE---eec-----ceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         242 --TP-YSE---ISG-----IITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       242 --~~-~~~---~~~-----~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                        .. ...   ...     .....+.|.++...+.+.|+|.|.|...
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~  201 (213)
T 3d9a_L          155 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS  201 (213)
T ss_dssp             ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTC
T ss_pred             CcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccC
Confidence              00 000   000     0124789999999899999999999754

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*

Probab=98.89  E-value=7.2e-09  Score=99.81  Aligned_cols=100  Identities=23%  Similarity=0.324  Sum_probs=74.3

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      .||.+|++...+.+.+.|+|+.|......+.+..|+|.|+..+..........+. ..+++.|.+|.||+.|.|+|||..
T Consensus       107 ~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~  186 (214)
T 2b5i_B          107 MAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKP  186 (214)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCChheeeeeeecccceEEEeccCCCCCEEEEEEEEee
Confidence            4789999988777899999999953222334789999999875422222223333 678999999999999999999998


Q ss_pred             CCCC----CCCCCcEEeecCCCCCC
Q psy8771         797 SIGD----GPSSYPITIRTHEDDPS  817 (904)
Q Consensus       797 ~~g~----g~~s~~~~~~t~~~~P~  817 (904)
                      ..|.    |++|.++.+.|.+..|+
T Consensus       187 ~~~~~G~WS~WS~~~~~~T~~~~~~  211 (214)
T 2b5i_B          187 LQGEFTTWSPWSQPLAFRTKPAALG  211 (214)
T ss_dssp             SCCSSCCCCCCCCCEEEECCC----
T ss_pred             CCCCCCCccCCCCCEEEEcCCCCcc
Confidence            7553    78999999999887764

>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}

Probab=98.89  E-value=1.9e-08  Score=101.29  Aligned_cols=77  Identities=14%  Similarity=0.231  Sum_probs=56.0

Q ss_pred             eEEecCCCeEEEEEEccC--CCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cCCeEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGS--PMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~--p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d~g~Y~c  173 (904)
                      +.+.+|++++|.|.+.|.  |.+.|.|+|.. +..+            ....|+..    ...+|.|.++  +|+|.|.|
T Consensus        12 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C   91 (256)
T 3ux9_B           12 VSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYYC   91 (256)
T ss_dssp             EEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred             EEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEEE
Confidence            889999999999999998  78899999842 1111            01235443    2347999999  79999999


Q ss_pred             EEEecCcc---eEEEEEEEEE
Q psy8771         174 IAASVLGV---IETSTIVKVQ  191 (904)
Q Consensus       174 ~a~n~~g~---~~~~~~l~v~  191 (904)
                      .+.|..+.   ....+.|.|.
T Consensus        92 ~~~~~~~~~~~~~~~~~l~V~  112 (256)
T 3ux9_B           92 QVRDNNENEWVFGGGTKLTVL  112 (256)
T ss_dssp             EEEETTTTEEEECCCEEEEEC
T ss_pred             EEEECCCCceEECCCEEEEEE
Confidence            99997653   2244567766

>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}

Probab=98.88  E-value=8.6e-09  Score=97.65  Aligned_cols=138  Identities=11%  Similarity=0.047  Sum_probs=90.2

Q ss_pred             CCCCcEEEeccCCceEEEEeCCCCC----CCceecccccccccceEEEEeeeccC-Ce-eeeeeeeccCCCCCCCCeEEc
Q psy8771          36 APRDVQVRPLSSSTMVIQWDEPETP----NGQITHPPTRAARSHARLAAQSVLRR-GR-LAHAVRQVADPVRRVPPQFSI  109 (904)
Q Consensus        36 ~p~~l~~~~~~~~s~~v~W~~~~~~----~g~i~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~v~~~~~~~~P~~~~  109 (904)
                      ....|.|..-+ +...+.|.+....    ++.+........|...+.|...+... .. ...+.+.+..  ...+|.|..
T Consensus        23 ~~v~L~C~~~~-~~~~~~W~k~g~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~--~~~~p~i~~   99 (184)
T 2gi7_A           23 KPVTLRCQGPP-GVDLYRLEKLSSSRYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATG--VFAKPSLSA   99 (184)
T ss_dssp             CCEEEEEECST-TCSEEEEEETTTCCEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEES--SSCCCEEEE
T ss_pred             CcEEEEEeCCC-CCCEEEEEECCccccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecC--cCCCCEEEe
Confidence            44455555444 5678899776432    34455555555565555565544321 11 1233444432  245677877


Q ss_pred             CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      .| + ..+.+|+.++|.|.+.+.| +.+.|+|+ +..+....+.....+.|.|.++  +|+|.|+|.|.|..+
T Consensus       100 ~p-~-~~v~~G~~v~l~C~~~~~~-~~~~w~k~-g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~  168 (184)
T 2gi7_A          100 QP-G-PAVSSGGDVTLQCQTRYGF-DQFALYKE-GDPAPYKNPERWYRASFPIITVTAAHSGTYRCYSFSSRD  168 (184)
T ss_dssp             EC-C-CSSCCTTCEEEEEECSSCC-CEEEEEEC-CCCTTSCCCCEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred             CC-C-ceecCCCcEEEEEEcCCCC-cEEEEEEC-CCcCcceecCCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence            66 3 6778999999999988776 68999999 6555543344446778999999  699999999999765

>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*

Probab=98.87  E-value=9.8e-08  Score=91.05  Aligned_cols=172  Identities=13%  Similarity=0.101  Sum_probs=115.4

Q ss_pred             ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE--EecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEE
Q psy8771         633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR--RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVR  710 (904)
Q Consensus       633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~  710 (904)
                      ...+++..|.+...   ....|.+.+...........  ...........+|.-...+.|.|.+    |. ..|....+.
T Consensus        35 ~~~~~tc~~~~~~~---~~~~~~~~~~~~~~~~~c~~~~~~~~~y~~~~~~~~l~~~~~i~V~l----G~-~~S~~~~f~  106 (223)
T 3up1_A           35 SQHSLTCAFEDPDV---NTTNLEFEICGALVEVKCLNFRKLQEIYFIETKKFLLIGKSNICVKV----GE-KSLTCKKID  106 (223)
T ss_dssp             TEEEEEEEESSTTC---CCTTEEEEEESSBBSCSEEECEEETTEEEEEESCBCCSSEEEEEEEE----TT-EEEEEEEEE
T ss_pred             ceEEEEEecCCCCC---CCCceEEEEecccccccccccccccceEEeecCCEEEEeccEEEEEc----CC-ceeccEEEE
Confidence            45778889988643   44556666664433222111  1222335566788888888888883    32 224456666


Q ss_pred             ecCCCCCCCCCCcEEEecC-CCEEEEEecCCCCCCCCc--cEEEEEEEEEEcc-CCCCccEEEEec-CcceEEecCCCCC
Q psy8771         711 TKQYVPGAPPQNVSCEPLS-STSIRISWEPPPVERSNG--HIVYYKLQFVETG-RSDSEASIVTLK-NQTSFVLDELKKW  785 (904)
Q Consensus       711 t~~~~p~~~P~~l~~~~~~-~~~v~l~W~~~~~~~~~g--~~~~Y~v~~~~~~-~~~~~~~~~~~~-~~~~~~i~~L~p~  785 (904)
                      ....+.+.||.+|.+.... .+.+.|+|.+|..  .++  ....|+|+|+... ...+  ....+. ....+.+.+|.|+
T Consensus       107 l~~iVKPdPP~nLtv~~~~~~~~l~LsW~~P~~--~~~~~~~L~YEVrYr~~~~~~~W--~~v~~~~t~~~i~l~~L~Pg  182 (223)
T 3up1_A          107 LTTIVKPEAPFDLSVVYREGANDFVVTFNTSHL--QKKYVKVLMHDVAYRQEKDENKW--THVNLSSTKLTLLQRKLQPA  182 (223)
T ss_dssp             GGGSBCCCCCEEEEEEEETTTTEEEEEEECGGG--GCSSSCCEEEEEEEEESSCSSCC--EEEEESSSEEEEEGGGSCTT
T ss_pred             ecceEEcCCCcceEEEEEcCCCCEEEEECCCCC--CCCcceeEEEEEEEEeCCCCCce--EEEEecCceeEEeccccCCC
Confidence            6666666689999997764 5789999999842  222  2689999999875 2333  223333 3335667899999


Q ss_pred             ceEEEEEEEeeC----CCCCCCCCcEEeecCCCCC
Q psy8771         786 TEYRIWVLAGTS----IGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       786 t~Y~~~V~a~~~----~g~g~~s~~~~~~t~~~~P  816 (904)
                      +.|.|+|||...    .+.|.+|.++.+.|.+.+|
T Consensus       183 t~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~P  217 (223)
T 3up1_A          183 AMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEINN  217 (223)
T ss_dssp             CEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC-
T ss_pred             cEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCCC
Confidence            999999999985    2367889999999988887

>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*

Probab=98.87  E-value=2.7e-08  Score=109.89  Aligned_cols=149  Identities=11%  Similarity=0.200  Sum_probs=84.7

Q ss_pred             CCCCCcEEEeccC-Cc-eEEEEeCCCC------------CCCc------eecccccccccceEEEEeeeccCCeeeeeee
Q psy8771          35 TAPRDVQVRPLSS-ST-MVIQWDEPET------------PNGQ------ITHPPTRAARSHARLAAQSVLRRGRLAHAVR   94 (904)
Q Consensus        35 ~~p~~l~~~~~~~-~s-~~v~W~~~~~------------~~g~------i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   94 (904)
                      +....|.|...+. +. +.|.|.+...            .+|.      +........+ ....|...+..........+
T Consensus       147 g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v  225 (457)
T 1hzh_H          147 GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKA  225 (457)
T ss_dssp             TCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEEC
T ss_pred             CCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEe
Confidence            3566677776654 43 8999987652            1231      1111122223 44555555544443333322


Q ss_pred             eccC------------CCCCCCCeE-EcCCCCceEEecCCCeEEEEEEccCCCC----eEEEeeCCccccCCCC---cee
Q psy8771          95 QVAD------------PVRRVPPQF-SIPPPALLEVMLDSPLNLSCVAVGSPMP----FVKWRKGQNIELTPDD---KLP  154 (904)
Q Consensus        95 ~v~~------------~~~~~~P~~-~~~~~~~~~~~~g~~~~l~C~~~g~p~p----~i~W~k~~~~~~~~~~---~~~  154 (904)
                      .+..            ..+..+|.+ ..+|.....+.+|++++|.|.+.|.|.+    .|+|+|+ +..+....   ...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~-~~~~~~~~~~~~~~  304 (457)
T 1hzh_H          226 EPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD-GVEVHNAKTKPREE  304 (457)
T ss_dssp             CCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEET-TEEECCCEEEEEEE
T ss_pred             cccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeC-Ccccccccccccee
Confidence            2211            011235665 5555431226789999999999998653    9999999 55554322   122


Q ss_pred             ecceEEEEeee-----cC---CeEEEEEEEecCcceEEE
Q psy8771         155 VGRNVLTLDRV-----TE---SENYTCIAASVLGVIETS  185 (904)
Q Consensus       155 ~~~~~l~i~~l-----~d---~g~Y~c~a~n~~g~~~~~  185 (904)
                      ..++.|.|...     .|   +|.|+|.|.|..+.....
T Consensus       305 ~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~  343 (457)
T 1hzh_H          305 QYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIE  343 (457)
T ss_dssp             CTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEE
T ss_pred             cCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcce
Confidence            34566666542     34   999999999876654333

>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*

Probab=98.87  E-value=8.1e-09  Score=99.62  Aligned_cols=154  Identities=10%  Similarity=0.064  Sum_probs=91.7

Q ss_pred             eEEecCCCeEEEEEEc----cCCCCeEEEeeCCccccC------------CCCceee---cceEEEEeee--cCCeEEEE
Q psy8771         115 LEVMLDSPLNLSCVAV----GSPMPFVKWRKGQNIELT------------PDDKLPV---GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~----g~p~p~i~W~k~~~~~~~------------~~~~~~~---~~~~l~i~~l--~d~g~Y~c  173 (904)
                      +.+.+|+++.|.|.+.    |.|.+.+.|.|+ +..+.            ...|...   ++.+|.|.++  +|+|.|+|
T Consensus         4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~-~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C   82 (201)
T 1dr9_A            4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKE-KKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC   82 (201)
T ss_dssp             EEEETTSCEEECCSCCCCTTHHHHCEEEEEET-TEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred             EEEEeCCCEEEecccCCCcccccccEEEEEeC-CcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence            7889999999999996    457789999998 54431            0123321   4578999999  69999999


Q ss_pred             EEEecCcce-----EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCCCCCC---e
Q psy8771         174 IAASVLGVI-----ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTP---Y  244 (904)
Q Consensus       174 ~a~n~~g~~-----~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~---~  244 (904)
                      .|.|..|..     .....|.|.       ..+..|............++|.+... +.+..  .|.|...+....   .
T Consensus        83 ~~~~~~g~~~~~~~~~~~~l~V~-------~~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p--~i~W~k~g~~l~~~~~  153 (201)
T 1dr9_A           83 VVLKYEKDAFKREHLAEVTLSVK-------ADFPTPSISDFEIPTSNIRRIICSTSGGFPEP--HLSWLENGEELNAINT  153 (201)
T ss_dssp             EEEECCTTSCEEEEEEEEEEEEE-------CCCCCCEEEEEECSSTTEEEEEEEEEEESSCE--EEEEEESSCEECCSEE
T ss_pred             EEEcCCCCccccccccEEEEEEc-------CCCCCCceEeccCCCCCeEEEEEecCCccCCC--EEEEEECCEECccccc
Confidence            999987764     346666666       33333432222222344566666653 22222  345544322100   0


Q ss_pred             EEeecceeceE---EEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         245 SEISGIITTYY---TVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       245 ~~~~~~~~~~~---~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      ..........+   .+..+...+.+.|+|.|.|..|.
T Consensus       154 ~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~  190 (201)
T 1dr9_A          154 TVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLR  190 (201)
T ss_dssp             EEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCC
T ss_pred             eEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcce
Confidence            11111110111   22344567889999999998775

>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C

Probab=98.86  E-value=3.4e-08  Score=99.72  Aligned_cols=87  Identities=15%  Similarity=0.261  Sum_probs=63.4

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCC------CCeEEEeeCC-cccc------------CCCCceee----cceEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSP------MPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVL  160 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p------~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l  160 (904)
                      .+.+...|.. +.+.+|++++|.|.+.|.|      .+.|.|+|.. +..+            ....|+.+    ...+|
T Consensus         5 ~~~v~q~p~~-v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L   83 (264)
T 2gjj_A            5 DIVLTQTPSS-LPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTL   83 (264)
T ss_dssp             CCCEEEECSE-EEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred             ccceEecCCe-EEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEE
Confidence            3556666776 8999999999999999998      6889999842 2111            01345554    24589


Q ss_pred             EEeee--cCCeEEEEEEEecCcc-eEEEEEEEEE
Q psy8771         161 TLDRV--TESENYTCIAASVLGV-IETSTIVKVQ  191 (904)
Q Consensus       161 ~i~~l--~d~g~Y~c~a~n~~g~-~~~~~~l~v~  191 (904)
                      .|.++  +|+|.|.|.+.|..+. ....+.|.|.
T Consensus        84 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~  117 (264)
T 2gjj_A           84 TIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIK  117 (264)
T ss_dssp             EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEE
T ss_pred             EECCCCHHHCEEEEEEEecCCccEecCCEEEEEE
Confidence            99999  6999999999987653 2234567776

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}

Probab=98.86  E-value=7.6e-08  Score=93.84  Aligned_cols=134  Identities=17%  Similarity=0.142  Sum_probs=101.7

Q ss_pred             cceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEE
Q psy8771         674 VETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYK  753 (904)
Q Consensus       674 ~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~  753 (904)
                      ...+.|.++.......+++.|.|..|....  .+.+.. ..+|. +|..+.+. ....++.|+|..|.. ..+.++.+|.
T Consensus        75 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~v-~~~P~-~p~~~~~~-~~~~~~~l~w~~p~~-~~~~pi~~y~  148 (215)
T 3mtr_A           75 ASYLEVTPDSENDFGNYNCTAVNRIGQESL--EFILVQ-ADTPS-SPSIDQVE-PYSSTAQVQFDEPEA-TGGVPILKYK  148 (215)
T ss_dssp             EEEEEECCCSGGGCEEEEEEEECSSCEEEE--EEEEEE-CCCCC-CCEEEEEE-EETTEEEEEEECCSC-CCSSCEEEEE
T ss_pred             eeEEEEecCChhhCeEEEEEEEECCCceEE--EEEEEE-CCCCC-CCcceEEE-EecceEEEEEecCCc-cCCCceEEEE
Confidence            467899999999999999999999876422  222222 23343 56777764 467889999998752 3455899999


Q ss_pred             EEEEEccCCCCccEEEEec---CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         754 LQFVETGRSDSEASIVTLK---NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       754 v~~~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      |+|+..+...+........   ....+.|.+|.+++.|.|+|+|.|..|.|.+|..+.++|.+
T Consensus       149 v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p  211 (215)
T 3mtr_A          149 AEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP  211 (215)
T ss_dssp             EEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred             EEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence            9999987665533322222   33889999999999999999999999999999999999865

>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}

Probab=98.86  E-value=9.9e-09  Score=92.63  Aligned_cols=88  Identities=17%  Similarity=0.322  Sum_probs=68.4

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC--------ccccCCCCceee-----cceEEEEeee--cCCeEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ--------NIELTPDDKLPV-----GRNVLTLDRV--TESENY  171 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~--------~~~~~~~~~~~~-----~~~~l~i~~l--~d~g~Y  171 (904)
                      +...|.. +.+.+|++++|.|.+.+.|.+.|.|++.+        +..+. ..|+..     .+.+|.|.++  +|+|.|
T Consensus        41 ~~~~p~~-~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~-~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y  118 (145)
T 1z9m_A           41 SQPWTSD-ETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALR-DNRIQLVTSTPHELSISISNVALADEGEY  118 (145)
T ss_dssp             TCCBCCC-EEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSC-CTTEEEEEECSSEEEEEECSCCGGGCEEE
T ss_pred             eecCCce-EEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecc-cCCEEEecCCCCeEEEEECCCChhhCEEE
Confidence            3445566 99999999999999999999999999421        33332 345543     2578999999  699999


Q ss_pred             EEEEEecCcceEEEEEEEEEeecCCCCCCCCCC
Q psy8771         172 TCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP  204 (904)
Q Consensus       172 ~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p  204 (904)
                      +|.+.|. |.....+.|.|.       .+|.+|
T Consensus       119 ~C~~~n~-~~~~~~~~L~V~-------~~P~~P  143 (145)
T 1z9m_A          119 TCSIFTM-PVRTAKSLVTVL-------GIPQKP  143 (145)
T ss_dssp             EEEECSS-SCEEEEEEEEEE-------CCCC--
T ss_pred             EEEEEcC-CCceEEEEEEEE-------eCCCCC
Confidence            9999999 888999999998       666555

>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}

Probab=98.86  E-value=4.9e-08  Score=98.21  Aligned_cols=170  Identities=13%  Similarity=0.140  Sum_probs=99.0

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccC--CCCeEEEeeCC-cccc-----------------CCCCceeec------
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGS--PMPFVKWRKGQ-NIEL-----------------TPDDKLPVG------  156 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~k~~-~~~~-----------------~~~~~~~~~------  156 (904)
                      .+|.+...+.. +++.+|++++|.|.+.|.  |.+.|.|+|.. +..+                 ....|+.+.      
T Consensus         5 ~~~~~~~~~~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~   83 (256)
T 3juy_B            5 HHQVQLVQSGA-EVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN   83 (256)
T ss_dssp             --CCEEEECCC-EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred             cceEEEEecCC-ceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence            45667777777 999999999999999994  67889999732 1110                 012355442      


Q ss_pred             ceEEEEeee--cCCeEEEEEEEec------------CcceEEEEEEEEEeecCC-----------CCCCCCCCcceEEEe
Q psy8771         157 RNVLTLDRV--TESENYTCIAASV------------LGVIETSTIVKVQCKYAP-----------LLTLPVAPLDVKISE  211 (904)
Q Consensus       157 ~~~l~i~~l--~d~g~Y~c~a~n~------------~g~~~~~~~l~v~~~~~~-----------~~~~P~~p~~l~~~~  211 (904)
                      ..+|.|.++  +|+|.|.|.+.|.            .+.......|.|......           .......|..+.+  
T Consensus        84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--  161 (256)
T 3juy_B           84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSL--  161 (256)
T ss_dssp             EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEE--
T ss_pred             EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEE--
Confidence            236999999  6999999999986            333444566777621000           0000011222222  


Q ss_pred             ecCCeEEEEEeCCCccceEEEEEEEeC--CC----------------CCCeEEeecceeceEEEcCCCCCCeEEEEEEEE
Q psy8771         212 VTATSVRLDWTYPSETLLYYVIQYKPK--AA----------------NTPYSEISGIITTYYTVRNLSPYTEYEFYIIAV  273 (904)
Q Consensus       212 ~~~~sv~l~W~~~~~~~~~y~v~~~~~--~~----------------~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~  273 (904)
                      ....+++|.+...+.+. ...|.|...  +.                ...+..........|.|.++++.+.+.|.|.|.
T Consensus       162 ~~G~~v~L~C~~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~  240 (256)
T 3juy_B          162 SPGERATFSCRSSHSIR-SRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVY  240 (256)
T ss_dssp             CTTSCEEEEEEESSCCT-TCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEEC
T ss_pred             eCCCCEEEEEEECCCcC-CeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEe
Confidence            23445666665542221 012223211  11                111221122334569999999999999999998


Q ss_pred             cCC
Q psy8771         274 NNL  276 (904)
Q Consensus       274 n~~  276 (904)
                      |..
T Consensus       241 ~~~  243 (256)
T 3juy_B          241 GAS  243 (256)
T ss_dssp             CSS
T ss_pred             eCC
Confidence            853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	904
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	5e-21
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	4e-18
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	5e-12
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	3e-09
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	1e-08
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	6e-05
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	4e-20
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	1e-16
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	3e-12
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	2e-10
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	3e-09
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	8e-04
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	7e-19
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	4e-17
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	3e-12
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	8e-10
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	1e-08
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	2e-06
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	2e-18
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	4e-16
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	1e-13
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	4e-13
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	6e-11
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	9e-08
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	4e-17
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	9e-17
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	3e-14
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	1e-12
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	8e-12
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	0.001
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	6e-17
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	2e-14
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	2e-10
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	3e-08
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	2e-06
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	3e-05
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	1e-16
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	1e-15
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	1e-13
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	9e-13
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	2e-09
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	2e-04
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	1e-16
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	4e-16
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	5e-16
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	2e-12
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	4e-10
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	3e-04
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	3e-16
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	7e-14
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	5e-13
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	5e-12
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	7e-09
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	2e-07
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	7e-07
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	0.003
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	4e-16
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	1e-15
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	8e-12
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	6e-08
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	6e-08
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	1e-06
d1fnaa_	91	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	7e-16
d1fnaa_	91	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	4e-11
d1fnaa_	91	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	5e-09
d1fnaa_	91	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	8e-07
d1fnaa_	91	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	4e-05
d1qr4a2	88	b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu	4e-15
d1qr4a2	88	b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu	1e-07
d1qr4a2	88	b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu	5e-06
d1qr4a2	88	b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu	1e-05
d1qr4a2	88	b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu	0.003
d1j8ka_	94	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	7e-15
d1j8ka_	94	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	6e-09
d1j8ka_	94	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	3e-07
d1j8ka_	94	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	4e-06
d1j8ka_	94	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	0.003
d1tdqa2	92	b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicu	2e-14
d1tdqa2	92	b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicu	2e-10
d1tdqa2	92	b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicu	3e-08
d1tdqa2	92	b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicu	3e-06
d1tdqa2	92	b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicu	0.002
d1fnfa3	89	b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m	5e-14
d1fnfa3	89	b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m	4e-10
d1fnfa3	89	b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m	7e-09
d1fnfa3	89	b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m	2e-04
d1cfba2	105	b.1.2.1 (A:710-814) Neuroglian, two amino proximal	1e-13
d1cfba2	105	b.1.2.1 (A:710-814) Neuroglian, two amino proximal	2e-11
d1cfba2	105	b.1.2.1 (A:710-814) Neuroglian, two amino proximal	7e-11
d1cfba2	105	b.1.2.1 (A:710-814) Neuroglian, two amino proximal	2e-04
d1cfba2	105	b.1.2.1 (A:710-814) Neuroglian, two amino proximal	4e-04
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	1e-13
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	2e-13
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	3e-13
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	5e-07
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	3e-05
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	0.003
d2cuma1	93	b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens)	2e-13
d2cuma1	93	b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens)	4e-07
d2cuma1	93	b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens)	1e-06
d2cuma1	93	b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens)	3e-04
d1fnha2	90	b.1.2.1 (A:93-182) Fibronectin, different Fn3 modu	2e-13
d1fnha2	90	b.1.2.1 (A:93-182) Fibronectin, different Fn3 modu	3e-06
d1fnha2	90	b.1.2.1 (A:93-182) Fibronectin, different Fn3 modu	8e-05
d1fnha2	90	b.1.2.1 (A:93-182) Fibronectin, different Fn3 modu	6e-04
d1x3da1	105	b.1.2.1 (A:8-112) Fibronectin type-III domain cont	3e-13
d1x3da1	105	b.1.2.1 (A:8-112) Fibronectin type-III domain cont	3e-11
d1x3da1	105	b.1.2.1 (A:8-112) Fibronectin type-III domain cont	3e-10
d1x3da1	105	b.1.2.1 (A:8-112) Fibronectin type-III domain cont	8e-07
d1x3da1	105	b.1.2.1 (A:8-112) Fibronectin type-III domain cont	4e-06
d1qr4a1	87	b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus)	3e-13
d1qr4a1	87	b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus)	2e-07
d1qr4a1	87	b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus)	3e-07
d1qr4a1	87	b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus)	4e-06
d1qr4a1	87	b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus)	2e-04
d1x5xa1	96	b.1.2.1 (A:8-103) Fibronectin type-III domain cont	4e-13
d1x5xa1	96	b.1.2.1 (A:8-103) Fibronectin type-III domain cont	1e-09
d1x5xa1	96	b.1.2.1 (A:8-103) Fibronectin type-III domain cont	2e-08
d1x5xa1	96	b.1.2.1 (A:8-103) Fibronectin type-III domain cont	1e-07
d1x5xa1	96	b.1.2.1 (A:8-103) Fibronectin type-III domain cont	6e-04
d1qg3a1	92	b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Hum	5e-13
d1qg3a1	92	b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Hum	3e-12
d1qg3a1	92	b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Hum	4e-11
d1qg3a1	92	b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Hum	2e-07
d1qg3a1	92	b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Hum	1e-06
d1wk0a_	137	b.1.2.1 (A:) Fibronectin type-III domain containin	9e-13
d1wk0a_	137	b.1.2.1 (A:) Fibronectin type-III domain containin	5e-10
d1wk0a_	137	b.1.2.1 (A:) Fibronectin type-III domain containin	1e-08
d1wk0a_	137	b.1.2.1 (A:) Fibronectin type-III domain containin	7e-08
d1wk0a_	137	b.1.2.1 (A:) Fibronectin type-III domain containin	4e-04
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	2e-12
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	3e-12
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	3e-10
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	5e-06
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	6e-06
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	4e-04
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	2e-12
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	3e-11
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	2e-10
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	4e-08
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	2e-05
d1x5aa1	94	b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse	2e-12
d1x5aa1	94	b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse	3e-08
d1x5aa1	94	b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse	6e-08
d1x5aa1	94	b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse	9e-08
d1x5aa1	94	b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse	3e-04
d1ujta_	120	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	2e-12
d1ujta_	120	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	1e-11
d1ujta_	120	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	7e-10
d1ujta_	120	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	4e-06
d1ujta_	120	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	3e-04
d1ujta_	120	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	5e-04
d1x5ja1	100	b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [	2e-12
d1x5ja1	100	b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [	2e-12
d1x5ja1	100	b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [	5e-12
d1x5ja1	100	b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [	6e-07
d1x5ja1	100	b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [	9e-07
d1tdqa3	86	b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegic	3e-12
d1tdqa3	86	b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegic	7e-07
d1tdqa3	86	b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegic	1e-06
d1tdqa3	86	b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegic	6e-06
d1tdqa3	86	b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegic	0.001
d2cspa1	117	b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Ho	3e-12
d2cspa1	117	b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Ho	4e-11
d2cspa1	117	b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Ho	2e-05
d2cspa1	117	b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Ho	1e-04
d2cspa1	117	b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Ho	0.004
d1wf5a1	108	b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens)	3e-12
d1wf5a1	108	b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens)	4e-10
d1wf5a1	108	b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens)	1e-08
d1wf5a1	108	b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens)	8e-06
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	3e-12
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	5e-11
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	1e-10
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	2e-06
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	0.001
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	4e-12
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	1e-10
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	4e-09
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	3e-05
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	4e-04
d1fnha3	89	b.1.2.1 (A:183-271) Fibronectin, different Fn3 mod	5e-12
d1fnha3	89	b.1.2.1 (A:183-271) Fibronectin, different Fn3 mod	3e-07
d1fnha3	89	b.1.2.1 (A:183-271) Fibronectin, different Fn3 mod	5e-07
d1fnha3	89	b.1.2.1 (A:183-271) Fibronectin, different Fn3 mod	1e-04
d1fnha1	90	b.1.2.1 (A:3-92) Fibronectin, different Fn3 module	6e-12
d1fnha1	90	b.1.2.1 (A:3-92) Fibronectin, different Fn3 module	6e-07
d1fnha1	90	b.1.2.1 (A:3-92) Fibronectin, different Fn3 module	3e-06
d1fnha1	90	b.1.2.1 (A:3-92) Fibronectin, different Fn3 module	4e-04
d1tena_	90	b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId	2e-11
d1tena_	90	b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId	3e-06
d1tena_	90	b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId	1e-05
d1tena_	90	b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId	0.001
d1fnfa2	91	b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 m	2e-11
d1fnfa2	91	b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 m	7e-09
d1fnfa2	91	b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 m	2e-07
d1fnfa2	91	b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 m	7e-05
d1ueya_	127	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	3e-11
d1ueya_	127	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	1e-10
d1ueya_	127	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	2e-07
d1ueya_	127	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	2e-07
d2dtge1	102	b.1.2.1 (E:808-909) Insulin receptor {Human (Homo	6e-11
d2dtge1	102	b.1.2.1 (E:808-909) Insulin receptor {Human (Homo	3e-08
d2dtge1	102	b.1.2.1 (E:808-909) Insulin receptor {Human (Homo	2e-06
d2dtge1	102	b.1.2.1 (E:808-909) Insulin receptor {Human (Homo	8e-05
d1biha4	89	b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecr	6e-11
d1tdqa1	93	b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus)	6e-11
d1tdqa1	93	b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus)	4e-06
d1tdqa1	93	b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus)	6e-06
d1tdqa1	93	b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus)	0.004
d2dtge3	125	b.1.2.1 (E:468-592) Insulin receptor {Human (Homo	8e-11
d2dtge3	125	b.1.2.1 (E:468-592) Insulin receptor {Human (Homo	1e-09
d2dtge3	125	b.1.2.1 (E:468-592) Insulin receptor {Human (Homo	5e-07
d2dtge3	125	b.1.2.1 (E:468-592) Insulin receptor {Human (Homo	3e-06
d2dtge3	125	b.1.2.1 (E:468-592) Insulin receptor {Human (Homo	9e-05
d2djsa1	95	b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human	9e-11
d2djsa1	95	b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human	1e-10
d2djsa1	95	b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human	2e-10
d2djsa1	95	b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human	1e-07
d2djsa1	95	b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human	6e-05
d1k85a_	88	b.1.2.1 (A:) Fibronectin type III domain from chit	1e-10
d1k85a_	88	b.1.2.1 (A:) Fibronectin type III domain from chit	1e-06
d1k85a_	88	b.1.2.1 (A:) Fibronectin type III domain from chit	3e-05
d1k85a_	88	b.1.2.1 (A:) Fibronectin type III domain from chit	2e-04
d1k85a_	88	b.1.2.1 (A:) Fibronectin type III domain from chit	8e-04
d1x5ya1	98	b.1.2.1 (A:8-105) Myosin binding protein C, fast-t	3e-10
d1x5ya1	98	b.1.2.1 (A:8-105) Myosin binding protein C, fast-t	1e-08
d1x5ya1	98	b.1.2.1 (A:8-105) Myosin binding protein C, fast-t	2e-08
d1x5ya1	98	b.1.2.1 (A:8-105) Myosin binding protein C, fast-t	4e-06
d1wfta_	123	b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus	3e-10
d1wfta_	123	b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus	4e-07
d1wfta_	123	b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus	1e-06
d1wfta_	123	b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus	1e-04
d1wfta_	123	b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus	5e-04
d2crza1	97	b.1.2.1 (A:8-104) Fibronectin type-III domain cont	4e-10
d2crza1	97	b.1.2.1 (A:8-104) Fibronectin type-III domain cont	2e-08
d2crza1	97	b.1.2.1 (A:8-104) Fibronectin type-III domain cont	1e-05
d2crza1	97	b.1.2.1 (A:8-104) Fibronectin type-III domain cont	1e-05
d1qg3a2	103	b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Hum	5e-10
d1qg3a2	103	b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Hum	4e-09
d1qg3a2	103	b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Hum	1e-06
d1qg3a2	103	b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Hum	6e-04
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	6e-10
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	1e-08
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	1e-06
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	3e-05
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	0.001
d2crma1	107	b.1.2.1 (A:8-114) Fibronectin type-III domain cont	6e-10
d2crma1	107	b.1.2.1 (A:8-114) Fibronectin type-III domain cont	2e-08
d2crma1	107	b.1.2.1 (A:8-114) Fibronectin type-III domain cont	5e-08
d2crma1	107	b.1.2.1 (A:8-114) Fibronectin type-III domain cont	7e-04
d1cs6a3	91	b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gall	7e-10
d1wj3a_	117	b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo s	9e-10
d1wj3a_	117	b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo s	3e-09
d1wj3a_	117	b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo s	0.003
d1wj3a_	117	b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo s	0.004
d2ibga1	95	b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit	3e-09
d2ibga1	95	b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit	1e-08
d2ibga1	95	b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit	6e-07
d2cuha1	102	b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens)	8e-09
d2cuha1	102	b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens)	3e-04
d2cuha1	102	b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens)	5e-04
d2vkwa2	93	b.1.2.1 (A:601-693) Neural cell adhesion molecule	1e-08
d2vkwa2	93	b.1.2.1 (A:601-693) Neural cell adhesion molecule	5e-04
d2vkwa2	93	b.1.2.1 (A:601-693) Neural cell adhesion molecule	0.001
d2cuia1	101	b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens)	1e-08
d2cuia1	101	b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens)	0.001
d2cuia1	101	b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens)	0.004
d2b5ib2	104	b.1.2.1 (B:104-207) Interleukin-2 receptor beta ch	1e-08
d2b5ib2	104	b.1.2.1 (B:104-207) Interleukin-2 receptor beta ch	3e-08
d2b5ib2	104	b.1.2.1 (B:104-207) Interleukin-2 receptor beta ch	6e-07
d2b5ib2	104	b.1.2.1 (B:104-207) Interleukin-2 receptor beta ch	2e-04
d1fnfa1	94	b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 m	2e-08
d1fnfa1	94	b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 m	1e-07
d1fnfa1	94	b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 m	2e-07
d1fnfa1	94	b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 m	0.004
d1n26a3	104	b.1.2.1 (A:196-299) Interleukin-6 receptor alpha c	3e-08
d1n26a3	104	b.1.2.1 (A:196-299) Interleukin-6 receptor alpha c	2e-07
d1n26a3	104	b.1.2.1 (A:196-299) Interleukin-6 receptor alpha c	3e-05
d1iarb2	101	b.1.2.1 (B:97-197) Interleukin-4 receptor alpha ch	4e-08
d1iarb2	101	b.1.2.1 (B:97-197) Interleukin-4 receptor alpha ch	3e-06
d1iarb2	101	b.1.2.1 (B:97-197) Interleukin-4 receptor alpha ch	3e-04
d1bpva_	104	b.1.2.1 (A:) Type I titin module {Human (Homo sapi	6e-08
d1bpva_	104	b.1.2.1 (A:) Type I titin module {Human (Homo sapi	4e-06
d1bpva_	104	b.1.2.1 (A:) Type I titin module {Human (Homo sapi	9e-05
d1cfba1	100	b.1.2.1 (A:610-709) Neuroglian, two amino proximal	9e-08
d1cfba1	100	b.1.2.1 (A:610-709) Neuroglian, two amino proximal	6e-07
d1cfba1	100	b.1.2.1 (A:610-709) Neuroglian, two amino proximal	0.001
d2ic2a1	107	b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit	1e-07
d2ic2a1	107	b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit	4e-06
d2ic2a1	107	b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit	3e-04
d2fnba_	95	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	1e-07
d2fnba_	95	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	2e-04
d1wfua_	120	b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat	2e-07
d1wfua_	120	b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat	4e-07
d1wfua_	120	b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat	6e-07
d1wfua_	120	b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat	7e-05
d1x4xa1	93	b.1.2.1 (A:8-100) Fibronectin type-III domain cont	2e-07
d1x4xa1	93	b.1.2.1 (A:8-100) Fibronectin type-III domain cont	2e-07
d1x4xa1	93	b.1.2.1 (A:8-100) Fibronectin type-III domain cont	6e-06
d1x4xa1	93	b.1.2.1 (A:8-100) Fibronectin type-III domain cont	4e-05
d1bqua2	115	b.1.2.1 (A:100-214) Cytokine receptor gp130 cytoki	2e-07
d1bqua2	115	b.1.2.1 (A:100-214) Cytokine receptor gp130 cytoki	3e-07
d1bqua2	115	b.1.2.1 (A:100-214) Cytokine receptor gp130 cytoki	5e-06
d1bqua2	115	b.1.2.1 (A:100-214) Cytokine receptor gp130 cytoki	1e-04
d1owwa_	93	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	2e-07
d1owwa_	93	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	3e-05
d1owwa_	93	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	0.001
d3dara1	97	b.1.1.4 (A:153-249) Fibroblast growth factor recep	2e-07
d2d9qb2	105	b.1.2.1 (B:204-308) Granulocyte colony-stimulating	3e-07
d2d9qb2	105	b.1.2.1 (B:204-308) Granulocyte colony-stimulating	4e-05
d2d9qb2	105	b.1.2.1 (B:204-308) Granulocyte colony-stimulating	1e-04
d1g1ca_	98	b.1.1.4 (A:) Titin {Human (Homo sapiens), differen	6e-07
d1cs6a4	89	b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gall	7e-07
d1gl4b_	89	b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus muscu	1e-06
d1bqua1	95	b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-	1e-06
d1bqua1	95	b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-	1e-06
d1qz1a3	100	b.1.1.4 (A:190-289) Neural cell adhesion molecule	1e-06
d1axib2	106	b.1.2.1 (B:131-236) Growth hormone receptor {Human	1e-06
d1axib2	106	b.1.2.1 (B:131-236) Growth hormone receptor {Human	1e-05
d1axib2	106	b.1.2.1 (B:131-236) Growth hormone receptor {Human	0.004
d3d48r2	104	b.1.2.1 (R:101-204) Prolactin receptor {Human (Hom	2e-06
d3d48r2	104	b.1.2.1 (R:101-204) Prolactin receptor {Human (Hom	4e-04
d1erna2	105	b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor	2e-06
d1erna2	105	b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor	0.002
d2gysa2	114	b.1.2.1 (A:104-217) Common beta-chain in the GM-CS	2e-06
d2fdbp2	109	b.1.1.4 (P:2252-2360) Fibroblast growth factor rec	3e-06
d1koaa1	97	b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorha	4e-06
d2cqva1	101	b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [T	5e-06
d1fhga_	102	b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)	6e-06
d1cd9b2	106	b.1.2.1 (B:108-213) Granulocyte colony-stimulating	8e-06
d1cd9b2	106	b.1.2.1 (B:108-213) Granulocyte colony-stimulating	1e-04
d1cd9b2	106	b.1.2.1 (B:108-213) Granulocyte colony-stimulating	5e-04
d1uc6a_	109	b.1.2.1 (A:) Ciliary neurotrophic factor receptor	2e-05
d1uc6a_	109	b.1.2.1 (A:) Ciliary neurotrophic factor receptor	4e-05
d1uc6a_	109	b.1.2.1 (A:) Ciliary neurotrophic factor receptor	1e-04
d2haza1	101	b.1.2.1 (A:489-589) Neural cell adhesion molecule	2e-05
d2haza1	101	b.1.2.1 (A:489-589) Neural cell adhesion molecule	3e-05
d2haza1	101	b.1.2.1 (A:489-589) Neural cell adhesion molecule	3e-04
d1tnna_	91	b.1.1.4 (A:) Titin {Human (Homo sapiens), differen	4e-05
d1fyhb1	98	b.1.2.1 (B:12-109) Interferon-gamma receptor alpha	7e-05
d1cs6a1	97	b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus	7e-05
d1cd9b1	107	b.1.2.1 (B:1-107) Granulocyte colony-stimulating f	9e-05
d1cd9b1	107	b.1.2.1 (B:1-107) Granulocyte colony-stimulating f	3e-04
d1cd9b1	107	b.1.2.1 (B:1-107) Granulocyte colony-stimulating f	0.001
d1wiua_	93	b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis el	1e-04
d1v5ja_	108	b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId	1e-04
d1v5ja_	108	b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId	6e-04
d1f6fb2	103	b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattu	1e-04
d1f6fb2	103	b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattu	0.002
d3d85d3	94	b.1.2.1 (D:212-305) The p40 domain of interleukin-	2e-04
d1nbqa2	104	b.1.1.4 (A:130-233) Junction adhesion molecule, JA	2e-04
d2b5ic1	95	b.1.2.1 (C:130-224) Cytokine receptor common gamma	2e-04
d2b5ic1	95	b.1.2.1 (C:130-224) Cytokine receptor common gamma	5e-04
d2gysa4	100	b.1.2.1 (A:317-416) Common beta-chain in the GM-CS	2e-04
d2gysa4	100	b.1.2.1 (A:317-416) Common beta-chain in the GM-CS	5e-04
d1rhfa1	91	b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor	4e-04
d1x5ia1	113	b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [	6e-04
d2avga1	110	b.1.1.4 (A:1-110) Cardiac myosin binding protein C	8e-04
d1iray3	107	b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor	0.001
d1biha3	97	b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecr	0.002
d2oz4a3	84	b.1.1.4 (A:367-450) Intercellular adhesion molecul	0.003
d1gxea_	130	b.1.1.4 (A:) Cardiac myosin binding protein C, dif	0.003
d2c9aa1	96	b.1.1.4 (A:184-279) Receptor-type tyrosine-protein	0.003
d2crya1	115	b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRR	0.004

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.2 bits (215), Expect = 5e-21
 Identities = 40/112 (35%), Positives = 57/112 (50%)

Query: 707 IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA 766
           + VRT   VP A PQN+S E  +S SI I W+PP     NG I  YK+++ +  R     
Sbjct: 2   VAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVT 61

Query: 767 SIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE 818
             +    Q S +++ L + TEY   V A T  G GP++  ++  T E D  E
Sbjct: 62  ETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDE 113

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 4e-18
 Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 3/115 (2%)

Query: 472 IPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWD--EPETPNGQITGYKVYYTQDQSLPMSA 529
           + VRT    P  AP+++ +   +S +++I W    P T NGQITGYK+ Y +        
Sbjct: 2   VAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVT 61

Query: 530 WETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPR 584
                        I  L   T Y  RV A T  G GP +  +  +T +    + R
Sbjct: 62  ETLVSGTQLS-QLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETR 115

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 5e-12
 Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 6/104 (5%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET------LLYYVIQYKPKAANTPYSEISGIITTY 254
             AP ++ +    + S+ + W  P+          Y +   K    +     +       
Sbjct: 12  SAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLS 71

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAP 298
             +  L   TEY F + A+   G GP +      T E++     
Sbjct: 72  QLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETR 115

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 3e-09
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 16/106 (15%)

Query: 286 VITTGETEPGTAPRDVQVRPLSSSTMVIQWD--EPETPNGQITA--------------KH 329
            + T    P  AP+++ +   +S +++I W    P T NGQIT                 
Sbjct: 3   AVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTE 62

Query: 330 HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
               G   +  + GL   T Y   +AA +  G G  T  +   T +
Sbjct: 63  TLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFE 108

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGEN--IISYELYWNDTYAK--AKHHRRIGLVETY 677
           A P++L        ++ + W  P  + +N  I  Y++ +     K         G   + 
Sbjct: 13  AAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQ 72

Query: 678 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
            + GL   T Y   +AA +  G G  T  +   T +       
Sbjct: 73  LIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETR 115

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 6e-05
 Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 5/108 (4%)

Query: 800 DGPSSYPITIRTHEDDPSEV-----CPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGG 854
           D PS+ P  +     +   +      P               ++       +   +  G 
Sbjct: 9   DVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGT 68

Query: 855 ALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPHV 902
            L   + GL   T Y  +VAALT  G G  +   + +T     +   V
Sbjct: 69  QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRV 116

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (207), Expect = 4e-20
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 709 VRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD----S 764
           + T++  P  PP +V+ +P++S SI+++W+ P  E  NG I  Y++ + E         S
Sbjct: 1   ISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS 60

Query: 765 EASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
              +    +   + LD LKK+ +Y + V A    G GPSS  I   T E
Sbjct: 61  IVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLE 109

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.2 bits (181), Expect = 1e-16
 Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 474 VRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETP--NGQITGYKVYYTQDQSLPMSAWE 531
           + T++  P   P DV ++P++S ++ + W  P+    NG I GY++ Y ++       + 
Sbjct: 1   ISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS 60

Query: 532 TQVVDNNQLTT---ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
              +     +    + +L     Y + VQAF   G GP S+ +   T +
Sbjct: 61  IVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLE 109

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 3e-12
 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 10/101 (9%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSE-----TLLYYVIQYKPKAANTPYSEISGII---- 251
              P+DV +  VT+ S+++ W  P +      +  Y I Y+  +  +        +    
Sbjct: 9   DGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATG 68

Query: 252 -TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
            +  YT+ NL  + +Y   + A N  G GP SS    TT E
Sbjct: 69  DSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLE 109

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (135), Expect = 2e-10
 Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 20/109 (18%)

Query: 287 ITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG--------------------QIT 326
           I+T E  P   P DV ++P++S ++ + W  P+                        Q +
Sbjct: 1   ISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS 60

Query: 327 AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
               +  G  E Y+L  L     Y + + A +  G G ++  I   T +
Sbjct: 61  IVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLE 109

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 3e-09
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 8/98 (8%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGEN--IISYELYWNDTYAKAKHHRRI------GLVE 675
           P D+    +   ++ + W  P    +N  I  Y++ + +    +     I      G  E
Sbjct: 12  PMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSE 71

Query: 676 TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713
            Y+L  L     Y + + A +  G G ++  I   T +
Sbjct: 72  VYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLE 109

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 8e-04
 Identities = 12/58 (20%), Positives = 18/58 (31%)

Query: 836 NFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
           N  G      +    + G +    +  L+    Y + V A  R G G  S      T 
Sbjct: 51  NSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.1 bits (199), Expect = 7e-19
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD------ 763
            + + +P   P NV    ++ST   + W+P P++   GH+  Y++ + +T  S       
Sbjct: 8   HSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRH 67

Query: 764 -SEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
             +  +    ++T  +L  L+ ++ Y + V      G+GP+S      T E    
Sbjct: 68  IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP 122

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (187), Expect = 4e-17
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 8/115 (6%)

Query: 475 RTKQYEPGTAPRDVQVRPLSSSTMVIQWD--EPETPNGQITGYKVYYTQDQSL-----PM 527
            + +  P  AP +V+V  ++S+   + WD    ++  G + GY++YY + QS        
Sbjct: 8   HSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRH 67

Query: 528 SAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581
              +      ++    +  L P + YT+ V+     G GP S   +  T +G   
Sbjct: 68  IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP 122

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 3e-12
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 13/110 (11%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGII---- 251
            VAP +V+++ V +T   + W           L  Y I Y    +++  +          
Sbjct: 15  MVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILT 74

Query: 252 ----TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
                T+  +  L P++ Y   +  VN  G GP S   V  T E    ++
Sbjct: 75  FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPSS 124

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 8e-10
 Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 23/117 (19%)

Query: 282 SSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWD--EPETPNGQITAKHHRRI------ 333
           SS +   +GE  P  AP +V+V  ++S+   + WD    ++  G +              
Sbjct: 2   SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSS 61

Query: 334 ---------------GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                          G      L GL P + Y + +   + +GEG  +P     T +
Sbjct: 62  KRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPE 118

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 14/108 (12%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGEN--IISYELYWNDTYAKAKHHRRI---------G 672
           P ++R   +  T   + W           +  Y +Y+  T + +K +RR          G
Sbjct: 18  PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQG 77

Query: 673 LVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
                 L GL P + Y + +   + +GEG  +P     T     G+ P
Sbjct: 78  SKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTP---EGSGP 122

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 18/95 (18%), Positives = 31/95 (32%)

Query: 803 SSYPITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTG 862
           +S    +         +      +R       S+ K    +   +     G      + G
Sbjct: 27  NSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPG 86

Query: 863 LQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVP 897
           L+P + YT+ V  +  KG+G  S      TP G  
Sbjct: 87  LEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSG 121

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 2e-18
 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 2/114 (1%)

Query: 464 GEGA-TTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQD 522
           G+G+ + PPI  RT    PG  P  +    + ++++ + W  P  PNG I  Y++ +  +
Sbjct: 3   GDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN 61

Query: 523 QSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
            +   +A    +  + +  T + L P ++Y  R+ A T  G G  +  ++V T+
Sbjct: 62  TTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 4e-16
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 699 GEGA-TTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFV 757
           G+G+ + PPI  RT   VPG PP  +    + +TS+R+ W+PP     NG I+ Y++   
Sbjct: 3   GDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPP--AAPNGIILAYQITHR 59

Query: 758 ETGRSDSEASIVTLKNQT-SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
               + + A++  L      +    LK  + Y   + A T  G G ++  + + T +
Sbjct: 60  LNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEK 116

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 1e-13
 Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 5/96 (5%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGIITTYY 255
           P  P+ +   EV  TSVRL W  P+             +     ANT   E+       Y
Sbjct: 21  PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQY 80

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
           T   L P + Y F I A    G G  +   V+TT +
Sbjct: 81  TATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEK 116

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 4e-13
 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 17/115 (14%)

Query: 276 LGRGPPSSPAV-ITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI--------- 325
           +G G PS P +   T +  PG  P  +    + ++++ + W  P  PNG I         
Sbjct: 2   IGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRL 60

Query: 326 ------TAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
                 TA           Y+ TGL P ++Y   + AQ+ +G G     + V T+
Sbjct: 61  NTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 6e-11
 Identities = 29/152 (19%), Positives = 49/152 (32%), Gaps = 39/152 (25%)

Query: 562 VGPG-PLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT 620
           +G G P   P+L +T   VP  P  +   +++ T+V L W  P      I++Y++     
Sbjct: 2   IGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN 61

Query: 621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLT 680
                                                       A           Y+ T
Sbjct: 62  TTTANT--------------------------------------ATVEVLAPSARQYTAT 83

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
           GL P ++Y   + AQ+ +G G     + V T+
Sbjct: 84  GLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 9e-08
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 18/114 (15%)

Query: 798 IGDG-PSSYPITIRTHEDDPSEV-----------------CPTQNDFRKNKKTNGSNFKG 839
           IGDG PS  PI  RT +D P                     P             ++   
Sbjct: 2   IGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN 61

Query: 840 GYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
               +    +V    A +   TGL+P+++Y  ++ A TRKG G+ ++   + T 
Sbjct: 62  TTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 4e-17
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 11/111 (9%)

Query: 467 ATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLP 526
            T P + +      PG    +++    S +++ + W+ P + NG+I  YK+YY +     
Sbjct: 3   ETQPEVQL------PG-PAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYME----K 51

Query: 527 MSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
            +  E  V  ++   TI+ L  +T Y+ RV A+   GPG  +  V V+T  
Sbjct: 52  GTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLS 102

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 9e-17
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 709 VRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASI 768
            + +  +PG P  N+     S TSI ++WE P     NG I  YKL ++E G   ++   
Sbjct: 4   TQPEVQLPG-PAPNLRAYAASPTSITVTWETP--VSGNGEIQNYKLYYMEKG---TDKEQ 57

Query: 769 VTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814
               +  S+ ++ LKK+TEY   V+A    G G S+  + +RT  D
Sbjct: 58  DVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 103

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 3e-14
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 7/106 (6%)

Query: 189 KVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYS 245
           +V+ +  P + LP    +++    + TS+ + W  P      +  Y + Y  K   T   
Sbjct: 1   RVETQ--PEVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEK--GTDKE 56

Query: 246 EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
           +   + +  YT+  L  YTEY F ++A N  G G  +    + T  
Sbjct: 57  QDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLS 102

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 1e-12
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
             +LRA     T++T+ W  P      I +Y+LY+ +     +    +    +Y++ GL 
Sbjct: 14  APNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-SHSYTINGLK 72

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713
             T Y   + A +  G G +TP + VRT  
Sbjct: 73  KYTEYSFRVVAYNKHGPGVSTPDVAVRTLS 102

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 8e-12
 Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 11/101 (10%)

Query: 286 VITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA-----------KHHRRIG 334
           V T  E +      +++    S +++ + W+ P + NG+I             K      
Sbjct: 2   VETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV 61

Query: 335 LVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
              +Y++ GL   T Y   + A +  G G +TP + VRT  
Sbjct: 62  SSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLS 102

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 0.001
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 856 LELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
               + GL+  T Y+ +V A  + G G  +    ++T 
Sbjct: 64  HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 6e-17
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 474 VRTKQYEPGTAPRDVQVRPL--SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWE 531
             T +  P + P+DV V        T+++ W  P   NG+ITGY +YY+ D +  +  W 
Sbjct: 4   GTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV 63

Query: 532 TQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
            + V  N+LT  I +LT  T Y  ++QA  S G GP+S  V  +T +
Sbjct: 64  IEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 2e-14
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 2/107 (1%)

Query: 709 VRTKQYVPGAPPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA 766
             T + VP +PP++V+         +I ++W+PP                          
Sbjct: 4   GTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV 63

Query: 767 SIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
               + N+ +  + EL   T Y   + A  S G GP S  +  RT +
Sbjct: 64  IEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 2e-10
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGII---TTY 254
           P   + V   E    ++ ++W  PSE    +  Y+I Y        +  +   +      
Sbjct: 14  PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLT 73

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
           + ++ L+  T Y F I A N+ G GP S      T +
Sbjct: 74  HQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (120), Expect = 3e-08
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 18/109 (16%)

Query: 285 AVITTGETEPGTAPRDVQVRPL--SSSTMVIQWDEPETPNGQITAKHHRRI--------- 333
           A  TT E  P + P+DV V        T+++ W  P   NG+IT                
Sbjct: 2   AHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD 61

Query: 334 -------GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                  G   T+ +  L  +T YY  + A++ +G G  +  +  RT +
Sbjct: 62  WVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 2e-06
 Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 6/96 (6%)

Query: 624 PRDLR--AVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE----TY 677
           P+D+   + + +   + + W  P+ +   I  Y +Y++       H   I  V     T+
Sbjct: 15  PKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTH 74

Query: 678 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713
            +  L  +T YY  + A++ +G G  +  +  RT +
Sbjct: 75  QIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 3e-05
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 7/106 (6%)

Query: 795 GTSIGDGPSSYP--ITIRTHEDDPSEV-----CPTQNDFRKNKKTNGSNFKGGYLNDPMR 847
           GT+    P+S P  +T+ + E  P  +      P++ + +        +           
Sbjct: 4   GTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV 63

Query: 848 FDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
            +   G  L   +  L  DT Y  ++ A   KG G  S+    +TP
Sbjct: 64  IEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTP 109

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 1e-16
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           +    ++      +++ + W EPE PNG I  Y++ Y +      S    + V      T
Sbjct: 5   SQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTR--AT 62

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
           +S L P T Y  +V+A TS G G  S  + V+T +
Sbjct: 63  VSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGK 97

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 1e-15
 Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P   + ++      TSV L W  P +    +L Y I+Y  K            +TT  TV
Sbjct: 4   PSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATV 63

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
             L P T Y F + A  + G G  S    + TG+
Sbjct: 64  SGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGK 97

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 1e-13
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 713 QYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK 772
           Q  P      +  E    TS+ + W+ P  E+ NG I+ Y++++ E  +     S +   
Sbjct: 1   QAAPS-QVVVIRQERAGQTSVSLLWQEP--EQPNGIILEYEIKYYEKDKEMQSYSTLKA- 56

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
             T   +  LK  T Y   V A TS G G  S  + + T +
Sbjct: 57  VTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGK 97

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 9e-13
 Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET-YSLTGL 682
              +R     +T+V+L W +P      I+ YE+ + +   + + +  +  V T  +++GL
Sbjct: 7   VVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSGL 66

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713
            P T Y   + A++  G G  +  + V T +
Sbjct: 67  KPGTRYVFQVRARTSAGCGRFSQAMEVETGK 97

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 13/93 (13%)

Query: 296 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITA-------------KHHRRIGLVETYSLT 342
           +    ++      +++ + W EPE PNG I                +     +    +++
Sbjct: 5   SQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVS 64

Query: 343 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
           GL P T Y   + A++  G G  +  + V T +
Sbjct: 65  GLKPGTRYVFQVRARTSAGCGRFSQAMEVETGK 97

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 14/51 (27%), Positives = 21/51 (41%)

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
            +   +           V+GL+P T Y  QV A T  G G  S+   ++T 
Sbjct: 46  KEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 1e-16
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 7/107 (6%)

Query: 707 IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA 766
           I V T+  VPG  P N   EP S TSI +SW PP  +    + + YK           E 
Sbjct: 2   IQVITQTGVPG-QPLNFKAEPESETSILLSWTPPRSDTIANYELVYK------DGEHGEE 54

Query: 767 SIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
             +T++  TS+ L  LK  + Y   + A +  G G S+  I+ RT +
Sbjct: 55  QRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.4 bits (177), Expect = 4e-16
 Identities = 21/94 (22%), Positives = 37/94 (39%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR 258
            +P  PL+ K    + TS+ L WT P    +           +     I+    T Y ++
Sbjct: 9   GVPGQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITIEPGTSYRLQ 68

Query: 259 NLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET 292
            L P + Y F + A +  G G  ++     T ++
Sbjct: 69  GLKPNSLYYFRLAARSPQGLGASTAEISARTMQS 102

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 5e-16
 Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 472 IPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWE 531
           I V T+   PG  P + +  P S +++++ W  P   +  I  Y++ Y   +       +
Sbjct: 2   IQVITQTGVPG-QPLNFKAEPESETSILLSWTPPR--SDTIANYELVYKDGEH---GEEQ 55

Query: 532 TQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
              ++      +  L P+++Y  R+ A +  G G  +A +  +T Q
Sbjct: 56  RITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 2e-12
 Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P + +A    ET++ L+W+ P      I +YEL + D     +    I    +Y L GL 
Sbjct: 14  PLNFKAEPESETSILLSWTPPRSD--TIANYELVYKDGEHGEEQRITIEPGTSYRLQGLK 71

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713
           PN+LYY  LAA+SP+G GA+T  I  RT Q
Sbjct: 72  PNSLYYFRLAARSPQGLGASTAEISARTMQ 101

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 4e-10
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 11/99 (11%)

Query: 287 ITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRR----------IGLV 336
           + T    PG  P + +  P S +++++ W  P +         ++           I   
Sbjct: 4   VITQTGVPG-QPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITIEPG 62

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
            +Y L GL PN+LYY  LAA+SP+G GA+T  I  RT Q
Sbjct: 63  TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 3e-04
 Identities = 9/51 (17%), Positives = 23/51 (45%)

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
                  ++        + GL+P+++Y  ++AA + +G G  +   + +T 
Sbjct: 50  EHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTM 100

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (185), Expect = 3e-16
 Identities = 31/233 (13%), Positives = 60/233 (25%), Gaps = 44/233 (18%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           + P D      SSS ++++W  P  PNG IT Y V++           E   +       
Sbjct: 4   SVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFW-------ERQAEDSELFELDYCL 56

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSK 602
                P   ++   ++  S                  P                      
Sbjct: 57  KGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKT-------------------- 96

Query: 603 PTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY 662
                          +    +  +       E  +      P  S +     ++      
Sbjct: 97  --------------DSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNN 142

Query: 663 AKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG---ATTPPIPVRTK 712
            + +   ++   E+  ++GL   T Y I L A +        +    +  RT 
Sbjct: 143 EEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTM 195

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (167), Expect = 7e-14
 Identities = 27/197 (13%), Positives = 57/197 (28%), Gaps = 17/197 (8%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P D  +V    + + L W  P+    NI  Y ++W      ++       ++        
Sbjct: 6   PLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFELDYCLK----GLKL 61

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG------APPQNVSCEPLSSTSIRISW 737
           P+  +     ++  +    +            P          +  S        +    
Sbjct: 62  PSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVV 121

Query: 738 EPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTS 797
             P   R    +          G ++       + N+ S V+  L+ +T YRI + A   
Sbjct: 122 FVPRPSRKRRSLGDV----GNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQ 177

Query: 798 IGDGP---SSYPITIRT 811
                    +  ++ RT
Sbjct: 178 DTPEERCSVAAYVSART 194

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (160), Expect = 5e-13
 Identities = 28/200 (14%), Positives = 60/200 (30%), Gaps = 29/200 (14%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYY 255
           T P  PLD      +++ + L W  PS+    + +Y++ ++ +A ++   E+      Y 
Sbjct: 1   TNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFEL-----DYC 55

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGT------APRDVQVRPLSSS 309
                 P   +     + ++                + P T         +   R     
Sbjct: 56  LKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFED 115

Query: 310 TMVIQWDEPETPNGQI------------TAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQ 357
            +      P     +               +   ++   E+  ++GL   T Y I L A 
Sbjct: 116 YLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQAC 175

Query: 358 SPRGEG---ATTPPIPVRTK 374
           +        +    +  RT 
Sbjct: 176 NQDTPEERCSVAAYVSARTM 195

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (153), Expect = 5e-12
 Identities = 27/200 (13%), Positives = 53/200 (26%), Gaps = 29/200 (14%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P +      SS+ I + W+PP     NG+I +Y + +              L      +
Sbjct: 5   VPLDPISVSNSSSQIILKWKPP--SDPNGNITHYLVFWERQAEDS------ELFELDYCL 56

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPTQNDFRKNKKTN----- 833
                    +     +  S     S Y  +       P        +  ++         
Sbjct: 57  KGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDY 116

Query: 834 -----------GSNFKGGYLNDPM-----RFDVSDGGALELNVTGLQPDTIYTIQVAALT 877
                            G + +       R          L ++GL+  T Y I++ A  
Sbjct: 117 LHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACN 176

Query: 878 RKGDGDRSKPETIKTPGGVP 897
           +    +R       +   +P
Sbjct: 177 QDTPEERCSVAAYVSARTMP 196

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (129), Expect = 7e-09
 Identities = 12/114 (10%), Positives = 25/114 (21%), Gaps = 2/114 (1%)

Query: 183 ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT 242
              +  +          +     +    +     +      P  +     +     A N 
Sbjct: 83  YEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNN 142

Query: 243 PYSEI--SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
                    +      +  L  +T Y   + A N        S A   +  T P
Sbjct: 143 EEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (117), Expect = 2e-07
 Identities = 18/140 (12%), Positives = 36/140 (25%), Gaps = 9/140 (6%)

Query: 447 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGT------APRDVQVRPLSSSTMVI 500
             P+  +     ++  +    +            P T         +   R      +  
Sbjct: 60  KLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHN 119

Query: 501 QWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFT 560
               P     + +   V    +          + V N +   IS L   T Y I +QA  
Sbjct: 120 VVFVPRPSRKRRSLGDVGNAGNNE---EHRPFEKVVNKESLVISGLRHFTGYRIELQACN 176

Query: 561 SVGPGPLSAPVLVKTQQGVP 580
              P    +     + + +P
Sbjct: 177 QDTPEERCSVAAYVSARTMP 196

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (114), Expect = 7e-07
 Identities = 29/197 (14%), Positives = 44/197 (22%), Gaps = 13/197 (6%)

Query: 292 TEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLT--------G 343
           T P   P D      SSS ++++W  P  PNG IT          E   L          
Sbjct: 1   TNPS-VPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFELDYCLKGL 59

Query: 344 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTG 403
             P+  +     ++  +    +                                   L  
Sbjct: 60  KLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHN 119

Query: 404 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPR 463
           +           +    G            K   K        L   T Y I L A +  
Sbjct: 120 VVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKES-LVISGLRHFTGYRIELQACNQD 178

Query: 464 GEG---ATTPPIPVRTK 477
                 +    +  RT 
Sbjct: 179 TPEERCSVAAYVSARTM 195

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (85), Expect = 0.003
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 31 TEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITH 66
          T P   P D      SSS ++++W  P  PNG ITH
Sbjct: 1  TNPS-VPLDPISVSNSSSQIILKWKPPSDPNGNITH 35

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 4e-16
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 2/105 (1%)

Query: 471 PIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAW 530
           P  VRT +  PG     +    +  +++ + W EP   NG +TGY++ + ++ +   +  
Sbjct: 1   PQLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISW-EEYNRTNTRV 58

Query: 531 ETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
              + +      ++ LT  T YTI V A TS G G +SA  +   
Sbjct: 59  THYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSG 103

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 1e-15
 Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 706 PIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE 765
           P  VRT + VPG P  ++S   +  TS+++SW+ P     NG +  Y++ + E  R+++ 
Sbjct: 1   PQLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQEP--GEKNGILTGYRISWEEYNRTNTR 57

Query: 766 ASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
            +         + +  L   T Y I V A TS G G  S       
Sbjct: 58  VTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSG 103

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 8e-12
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPK-AANTPYSEISGIITTYYT 256
           P     +  SE+  TS+++ W  P E    L  Y I ++     NT  +     +T  Y 
Sbjct: 11  PGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYR 70

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           V  L+  T Y   + A+ + G+G  S+  + + 
Sbjct: 71  VTGLTALTTYTIEVAAMTSKGQGQVSASTISSG 103

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 6e-08
 Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 15/104 (14%)

Query: 284 PAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKH-------------- 329
           P ++ T E  PG     +    +  +++ + W EP   NG +T                 
Sbjct: 1   PQLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVT 59

Query: 330 HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
           H    +   Y +TGL   T Y I +AA + +G+G  +       
Sbjct: 60  HYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSG 103

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 6e-08
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 570 PVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 617
           P LV+T + VP     L   +I +T++ ++W +P      +  Y + W
Sbjct: 1   PQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISW 48

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 2/90 (2%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW--NDTYAKAKHHRRIGLVETYSLTG 681
              L   +I +T++ ++W +P      +  Y + W   +       H    +   Y +TG
Sbjct: 14  VGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTG 73

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
           L   T Y I +AA + +G+G  +       
Sbjct: 74  LTALTTYTIEVAAMTSKGQGQVSASTISSG 103

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 7e-16
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 206 DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTVRNLSPYT 264
           D+++   T TS+ + W  P+ T+ YY I Y     N+P  E +     +  T+  L P  
Sbjct: 2   DLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGV 61

Query: 265 EYEFYIIAVNNLGRGPPSSPAVITTGETE 293
           +Y   + AV   G  P SS  +     TE
Sbjct: 62  DYTITVYAVTGRGDSPASSKPISINYRTE 90

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 4e-11
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 721 QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLD 780
           +++     + TS+ ISW+ P        + YY++ + ETG +          ++++  + 
Sbjct: 1   RDLEVVAATPTSLLISWDAP-----AVTVRYYRITYGETGGNSPVQEFTVPGSKSTATIS 55

Query: 781 ELKKWTEYRIWVLAGTSIGDGP-SSYPITIRTHED 814
            LK   +Y I V A T  GD P SS PI+I    +
Sbjct: 56  GLKPGVDYTITVYAVTGRGDSPASSKPISINYRTE 90

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 5e-09
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 486 RDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISD 545
           RD++V   + ++++I WD    P   +  Y++ Y +          T     +   TIS 
Sbjct: 1   RDLEVVAATPTSLLISWD---APAVTVRYYRITYGETGGNSPVQEFTVPGSKST-ATISG 56

Query: 546 LTPHTIYTIRVQAFTSVGPGPL-SAPVLVKTQ 576
           L P   YTI V A T  G  P  S P+ +  +
Sbjct: 57  LKPGVDYTITVYAVTGRGDSPASSKPISINYR 88

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 8e-07
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK--AKHHRRIGLVETYSLTGL 682
           RDL  V    T++ ++W  P      +  Y + + +T      +     G   T +++GL
Sbjct: 1   RDLEVVAATPTSLLISWDAPAV---TVRYYRITYGETGGNSPVQEFTVPGSKSTATISGL 57

Query: 683 YPNTLYYIWLAAQSPRGEG-ATTPPIPVRTK 712
            P   Y I + A + RG+  A++ PI +  +
Sbjct: 58  KPGVDYTITVYAVTGRGDSPASSKPISINYR 88

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 4e-05
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 12/88 (13%)

Query: 299 RDVQVRPLSSSTMVIQWDEPE-----------TPNGQITAKHHRRIGLVETYSLTGLYPN 347
           RD++V   + ++++I WD P               G    +     G   T +++GL P 
Sbjct: 1   RDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPG 60

Query: 348 TLYYIWLAAQSPRGEG-ATTPPIPVRTK 374
             Y I + A + RG+  A++ PI +  +
Sbjct: 61  VDYTITVYAVTGRGDSPASSKPISINYR 88

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 69.1 bits (168), Expect = 4e-15
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 1/87 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSP 262
           +P  +  S++T  S  + WT P   +  Y + Y P    TP         T   +  L P
Sbjct: 3   SPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVP 62

Query: 263 YTEYEFYIIAVNNLGRGPPSSPAVITT 289
             +Y   II+V       P S  ++ T
Sbjct: 63  GVDYNVNIISVKGFEESEPIS-GILKT 88

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 48.0 bits (113), Expect = 1e-07
 Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 6/89 (6%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           +P+ +    ++ ++  + W  P     ++  Y+V Y              V  +   T +
Sbjct: 3   SPKGISFSDITENSATVSWTPP---RSRVDSYRVSYVPITGGTP--NVVTVDGSKTRTKL 57

Query: 544 SDLTPHTIYTIRVQAFTSVGPG-PLSAPV 571
             L P   Y + + +        P+S  +
Sbjct: 58  VKLVPGVDYNVNIISVKGFEESEPISGIL 86

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.3 bits (101), Expect = 5e-06
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 4/79 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET-YSLTGL 682
           P+ +   DI E + T++W+ P      + SY + +        +   +   +T   L  L
Sbjct: 4   PKGISFSDITENSATVSWTPPRS---RVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKL 60

Query: 683 YPNTLYYIWLAAQSPRGEG 701
            P   Y + + +     E 
Sbjct: 61  VPGVDYNVNIISVKGFEES 79

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 42.6 bits (99), Expect = 1e-05
 Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 6/85 (7%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF 777
             P+ +S   ++  S  +SW PP     +  + Y  +         +   +    ++T  
Sbjct: 2   GSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPIT------GGTPNVVTVDGSKTRT 55

Query: 778 VLDELKKWTEYRIWVLAGTSIGDGP 802
            L +L    +Y + +++     +  
Sbjct: 56  KLVKLVPGVDYNVNIISVKGFEESE 80

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 35.6 bits (81), Expect = 0.003
 Identities = 11/77 (14%), Positives = 22/77 (28%), Gaps = 10/77 (12%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPE----------TPNGQITAKHHRRIGLVETYSLTGLYP 346
           +P+ +    ++ ++  + W  P            P    T       G      L  L P
Sbjct: 3   SPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVP 62

Query: 347 NTLYYIWLAAQSPRGEG 363
              Y + + +     E 
Sbjct: 63  GVDYNVNIISVKGFEES 79

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 7e-15
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 1/88 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT-TYYTVRNLS 261
            P  +  ++V   S+++ W  P   +  Y + Y            +         ++ L 
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLR 63

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           P +EY   ++A+++     P      T 
Sbjct: 64  PGSEYTVSVVALHDDMESQPLIGTQSTA 91

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 6e-09
 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P+ +    +   ++ I W+   +P GQ++ Y+V Y+  +      +     + +    +
Sbjct: 4   RPKGLAFTDVDVDSIKIAWE---SPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDT-AEL 59

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581
             L P + YT+ V A           P++      +P+
Sbjct: 60  QGLRPGSEYTVSVVALHDDMESQ---PLIGTQSTAIPA 94

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 3e-07
 Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P+ ++   +   SI+I+WE P        +  Y++ +        E        + +  
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESPQG-----QVSRYRVTYSSPEDGIHELFPAPDGEEDTAE 58

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817
           L  L+  +EY + V+A     +     P+        P+
Sbjct: 59  LQGLRPGSEYTVSVVALHDDMESQ---PLIGTQSTAIPA 94

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 4e-06
 Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 4/94 (4%)

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
           +P+ L   D+   ++ +AW  P               +           G  +T  L GL
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESPQGQVSRYR-VTYSSPEDGIHELFPAPDGEEDTAELQGL 62

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVP 716
            P + Y + + A     E     P+       +P
Sbjct: 63  RPGSEYTVSVVALHDDMES---QPLIGTQSTAIP 93

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.003
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 11/78 (14%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNGQI-----------TAKHHRRIGLVETYSLTGLY 345
            P+ +    +   ++ I W+ P+    +                    G  +T  L GL 
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLR 63

Query: 346 PNTLYYIWLAAQSPRGEG 363
           P + Y + + A     E 
Sbjct: 64  PGSEYTVSVVALHDDMES 81

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.2 bits (163), Expect = 2e-14
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA---NTPYSEISGIITTYYTVRN 259
           AP ++++   TATS+ L+W         Y + Y   A    +          TT  T+ +
Sbjct: 3   APKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTD 62

Query: 260 LSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288
           L P TEY   I AV N  +  P++    T
Sbjct: 63  LVPGTEYGVGISAVMNSKQSIPATMNART 91

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.0 bits (134), Expect = 2e-10
 Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-T 542
           AP++++V   +++++ ++WD       +   YKV Y+                      T
Sbjct: 3   APKNLRVGSRTATSLDLEWD---NSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTT 59

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           ++DL P T Y + + A  +       A +  +T+
Sbjct: 60  LTDLVPGTEYGVGISAVMNSKQSI-PATMNARTE 92

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.2 bits (119), Expect = 3e-08
 Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 8/95 (8%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK--NQTS 776
            P+N+     ++TS+ + W+             YK+ +           +V       T 
Sbjct: 3   APKNLRVGSRTATSLDLEWDNSE-----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTK 57

Query: 777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
             L +L   TEY + + A  +      +  +  RT
Sbjct: 58  TTLTDLVPGTEYGVGISAVMNSKQSIPA-TMNART 91

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.1 bits (103), Expect = 3e-06
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 2/89 (2%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGEN-IISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
           P++LR      T++ L W       +   + Y     + Y +    + IG     +LT L
Sbjct: 4   PKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDL 63

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
            P T Y + ++A     +      +  RT
Sbjct: 64  VPGTEYGVGISAVMNSKQSIPA-TMNART 91

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 14/90 (15%)

Query: 297 APRDVQVRPLSSSTMVIQWD-------------EPETPNGQITAKHHRRIGLVETYSLTG 343
           AP++++V   +++++ ++WD                           + IG     +LT 
Sbjct: 3   APKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTD 62

Query: 344 LYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
           L P T Y + ++A     +      +  RT
Sbjct: 63  LVPGTEYGVGISAVMNSKQSIPA-TMNART 91

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 5e-14
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTVRNLS 261
           +P  +  S++TA S  + W  P  T+  Y I++ P+  +    E          T+ NL+
Sbjct: 3   SPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLT 62

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVIT 288
           P TEY   I+A+N     P       T
Sbjct: 63  PGTEYVVSIVALNGREESPLLIGQQST 89

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 4e-10
 Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 5/84 (5%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P  +    +++ S  + W  P        I  Y+++      S          ++ S  
Sbjct: 3   SPTGIDFSDITANSFTVHWIAPR-----ATITGYRIRHHPEHFSGRPREDRVPHSRNSIT 57

Query: 779 LDELKKWTEYRIWVLAGTSIGDGP 802
           L  L   TEY + ++A     + P
Sbjct: 58  LTNLTPGTEYVVSIVALNGREESP 81

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 7e-09
 Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           +P  +    +++++  + W  P      ITGY++ +   +       E +V  +    T+
Sbjct: 3   SPTGIDFSDITANSFTVHWIAP---RATITGYRIRH-HPEHFSGRPREDRVPHSRNSITL 58

Query: 544 SDLTPHTIYTIRVQAFTSVGPGP 566
           ++LTP T Y + + A       P
Sbjct: 59  TNLTPGTEYVVSIVALNGREESP 81

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 2e-04
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK--AKHHRRIGLVETYSLTG 681
           P  +   DI   + T+ W  P      I  Y +  +  +     +  R      + +LT 
Sbjct: 4   PTGIDFSDITANSFTVHWIAPRA---TITGYRIRHHPEHFSGRPREDRVPHSRNSITLTN 60

Query: 682 LYPNTLYYIWLAAQSPRGEG 701
           L P T Y + + A + R E 
Sbjct: 61  LTPGTEYVVSIVALNGREES 80

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 65.7 bits (159), Expect = 1e-13
 Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 2/102 (1%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-N 773
           VP   P NV  +     ++ ISW P P    N    +Y + +     + +  +       
Sbjct: 3   VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWR 62

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITI-RTHED 814
           Q + V+ +   + +Y I V+A    G+   +    +  + ED
Sbjct: 63  QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGED 104

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 59.2 bits (142), Expect = 2e-11
 Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 8/101 (7%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYK-------PKAANTPYSEISGIITT 253
              P +V        ++ + WT   E        +          AA    + I      
Sbjct: 5   FKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQN 64

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVI-TTGETE 293
              + +   + +Y   ++A+N+ G    ++  V+  +GE  
Sbjct: 65  NIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDR 105

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 57.7 bits (138), Expect = 7e-11
 Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 2/95 (2%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNN 538
           P   P +V  +    + +VI W        N     Y V + +D                
Sbjct: 4   PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQ 63

Query: 539 QLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLV 573
               I+D      Y I+V A    G   ++A  +V
Sbjct: 64  NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVV 98

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 13/93 (13%), Positives = 22/93 (23%), Gaps = 17/93 (18%)

Query: 294 PGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITA---------------KHHRRIGLV 336
           P   P +V  +    + +VI W        N                     ++      
Sbjct: 4   PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQ 63

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI 369
               +        Y I + A + RGE       
Sbjct: 64  NNIVIADQPTFVKYLIKVVAINDRGESNVAAEE 96

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 38.8 bits (89), Expect = 4e-04
 Identities = 11/89 (12%), Positives = 24/89 (26%), Gaps = 5/89 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKP--THSGENIISYELYWNDTY---AKAKHHRRIGLVETYS 678
           P ++     +   + ++W+             Y + W       A   ++          
Sbjct: 8   PDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIV 67

Query: 679 LTGLYPNTLYYIWLAAQSPRGEGATTPPI 707
           +        Y I + A + RGE       
Sbjct: 68  IADQPTFVKYLIKVVAINDRGESNVAAEE 96

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 1e-13
 Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 11/111 (9%)

Query: 467 ATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE-TPNGQITGYKVYYTQDQSL 525
           ATT P+P         +APRDV    +S+  + + W  P   P+G    Y V+YT++   
Sbjct: 5   ATTGPLP---------SAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIA 55

Query: 526 PMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
                 T      Q  TI +L P T+Y  RV A    G G  SAP+ V+TQ
Sbjct: 56  RERVENTSHPGEMQ-VTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQ 105

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 2e-13
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 10/113 (8%)

Query: 702 ATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGR 761
           ATT P+P         + P++V    +S+  I+++W  P  +  +G  + Y + + + G 
Sbjct: 5   ATTGPLP---------SAPRDVVASLVSTRFIKLTWRTPASD-PHGDNLTYSVFYTKEGI 54

Query: 762 SDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814
           +       +   +    +  L   T Y   V+A    G G SS P+ + T  +
Sbjct: 55  ARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 107

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 3e-13
 Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 5/98 (5%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYP-----SETLLYYVIQYKPKAANTPYSEISGIITT 253
            LP AP DV  S V+   ++L W  P      + L Y V   K   A       S     
Sbjct: 9   PLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEM 68

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
             T++NL P T Y F ++A N  G G  S+P  + T  
Sbjct: 69  QVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 5e-07
 Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 3/92 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENII---SYELYWNDTYAKAKHHRRIGLVETYSLT 680
           PRD+ A  +    + L W  P           S          +   +         ++ 
Sbjct: 14  PRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQ 73

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
            L P T+Y   + AQ+  G G ++ P+ V T+
Sbjct: 74  NLMPATVYIFRVMAQNKHGSGESSAPLRVETQ 105

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 3e-05
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 17/105 (16%)

Query: 285 AVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPE-TPNGQITA--------------KH 329
           A  TTG   P  APRDV    +S+  + + W  P   P+G                    
Sbjct: 3   APATTGPL-PS-APRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVE 60

Query: 330 HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
           +         ++  L P T+Y   + AQ+  G G ++ P+ V T+
Sbjct: 61  NTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQ 105

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.003
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 843 NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKT 892
                 + S  G +++ +  L P T+Y  +V A  + G G+ S P  ++T
Sbjct: 55  ARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVET 104

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 2e-13
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSP 262
           AP D++  EVT  +  L WT P      Y++ +      T    + G IT++  +  L P
Sbjct: 4   APRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQTQEILLPGGITSH-QLLGLFP 62

Query: 263 YTEYEFYIIAVNNLGRGPPSSPAVITTG 290
            T Y   + A+      PP S +  T G
Sbjct: 63  STSYNARLQAMWGQSLLPPVSTSFTTGG 90

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 4e-07
 Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 8/93 (8%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P+++  + ++  +  ++W  PPV  +   + ++               I+     TS  
Sbjct: 4   APRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQTQ-------EILLPGGITSHQ 56

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           L  L   T Y   + A       P     +  T
Sbjct: 57  LLGLFPSTSYNARLQAMWGQSLLPPV-STSFTT 88

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           APRD++ + ++  T ++ W EP     +  GY + +           E  +        +
Sbjct: 4   APRDLEAKEVTPRTALLTWTEP---PVRPAGYLLSFHTPG---GQTQEILLPGGITSHQL 57

Query: 544 SDLTPHTIYTIRVQAFTSVGPGP 566
             L P T Y  R+QA       P
Sbjct: 58  LGLFPSTSYNARLQAMWGQSLLP 80

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 3e-04
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           PRDL A ++      L W++P         Y L ++    + +     G + ++ L GL+
Sbjct: 5   PRDLEAKEVTPRTALLTWTEPPV---RPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLF 61

Query: 684 PNTLYYIWLAAQSPRGEG 701
           P+T Y   L A   +   
Sbjct: 62  PSTSYNARLQAMWGQSLL 79

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 2e-13
 Identities = 20/86 (23%), Positives = 37/86 (43%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSP 262
            P   ++++ T T++ + W   +ET+  + +   P    TP           YT+  L P
Sbjct: 4   PPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQP 63

Query: 263 YTEYEFYIIAVNNLGRGPPSSPAVIT 288
            T+Y+ Y+  +N+  R  P      T
Sbjct: 64  GTDYKIYLYTLNDNARSSPVVIDAST 89

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 3e-06
 Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 7/94 (7%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF 777
           +PP+       + T+I ISW       +   +              +        +  S+
Sbjct: 3   SPPRRARVTDATETTITISWRTKTETITGFQVDAVPAN------GQTPIQRTIKPDVRSY 56

Query: 778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
            +  L+  T+Y+I++              I   T
Sbjct: 57  TITGLQPGTDYKIYLYTLNDNARSSPVV-IDAST 89

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 8e-05
 Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 5/84 (5%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           + PR  +V   + +T+ I W         ITG++V               +    +   T
Sbjct: 3   SPPRRARVTDATETTITISWRTK---TETITGFQVDAVPANGQTPIQRTIKPDVRS--YT 57

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGP 566
           I+ L P T Y I +          
Sbjct: 58  ITGLQPGTDYKIYLYTLNDNARSS 81

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 6e-04
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHS-GENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
           PR  R  D  ET +T++W   T +     +        T  +         V +Y++TGL
Sbjct: 5   PRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQRTIK---PDVRSYTITGL 61

Query: 683 YPNTLYYIWLAAQSPRGEG 701
            P T Y I+L   +     
Sbjct: 62  QPGTDYKIYLYTLNDNARS 80

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 3e-13
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 3/92 (3%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPS---ETLLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P  P   +I+  T  S+ L W  PS     +  +V+++     N  + +        + +
Sbjct: 11  PDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKI 70

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
             LSP    +F + A N+ G    S   +  T
Sbjct: 71  TKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT 102

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 3e-11
 Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 5/103 (4%)

Query: 474 VRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ 533
             T   EP   P   ++   + +++ +QW  P     +I  + + + + +    +    Q
Sbjct: 4   FTTLSCEPD-IPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKG---NGEFCQ 59

Query: 534 VVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
               +Q    I+ L+P      R+ A    G    S  VL  T
Sbjct: 60  CYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT 102

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 3e-10
 Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 4/103 (3%)

Query: 709 VRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASI 768
             T    P   P        +  S+ + W+ P    S    +   +   + G+ + E   
Sbjct: 4   FTTLSCEPD-IPNPPRIANRTKNSLTLQWKAPSDNGSK---IQNFVLEWDEGKGNGEFCQ 59

Query: 769 VTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
             + +Q  F + +L      +  + A    G    S  +   T
Sbjct: 60  CYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT 102

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 8e-07
 Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 1/90 (1%)

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET-YSLTG 681
            P   R  +  + ++TL W  P+ +G  I ++ L W++     +  +     +  + +T 
Sbjct: 13  IPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITK 72

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
           L P       L+A++  G    +  +   T
Sbjct: 73  LSPAMGCKFRLSARNDYGTSGFSEEVLYYT 102

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 4e-06
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 14/101 (13%)

Query: 286 VITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKH-------------HRR 332
           + TT   EP   P   ++   + +++ +QW  P     +I                    
Sbjct: 3   IFTTLSCEPD-IPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY 61

Query: 333 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
           +G  + + +T L P       L+A++  G    +  +   T
Sbjct: 62  MGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT 102

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 63.7 bits (154), Expect = 3e-13
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 1/86 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSP 262
            P D+++S+ T T++ L W  P      Y + Y   +      EI    T++  +R L  
Sbjct: 2   NPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKNEMEIPVDSTSF-ILRGLDA 60

Query: 263 YTEYEFYIIAVNNLGRGPPSSPAVIT 288
            TEY   ++A     +  P++    T
Sbjct: 61  GTEYTISLVAEKGRHKSKPTTIKGST 86

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.5 bits (112), Expect = 2e-07
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 8/93 (8%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P+++     + T++ + W  P           Y+L +V      +E  +    + TSF+
Sbjct: 2   NPKDLEVSDPTETTLSLRWRRP-----VAKFDRYRLTYVSPSGKKNE--MEIPVDSTSFI 54

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           L  L   TEY I ++A         +  I   T
Sbjct: 55  LRGLDAGTEYTISLVAEKGRHKSKPT-TIKGST 86

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 46.8 bits (110), Expect = 3e-07
 Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P+D++V   + +T+ ++W  P     +   Y++ Y           E ++  ++    +
Sbjct: 2   NPKDLEVSDPTETTLSLRWRRP---VAKFDRYRLTYVSPS---GKKNEMEIPVDSTSFIL 55

Query: 544 SDLTPHTIYTIRVQAFTSVGPGP 566
             L   T YTI + A        
Sbjct: 56  RGLDAGTEYTISLVAEKGRHKSK 78

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.7 bits (102), Expect = 4e-06
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P+DL   D  ET ++L W +P         Y L +     K           ++ L GL 
Sbjct: 3   PKDLEVSDPTETTLSLRWRRPVA---KFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLD 59

Query: 684 PNTLYYIWLAAQSPRGEG 701
             T Y I L A+  R + 
Sbjct: 60  AGTEYTISLVAEKGRHKS 77

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 9/76 (11%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRI---------GLVETYSLTGLYPN 347
            P+D++V   + +T+ ++W  P     +    +                 ++ L GL   
Sbjct: 2   NPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAG 61

Query: 348 TLYYIWLAAQSPRGEG 363
           T Y I L A+  R + 
Sbjct: 62  TEYTISLVAEKGRHKS 77

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (154), Expect = 4e-13
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITTYYT 256
           P  P    +++   T + L W+ PS T     + Y+++ + + +   +          YT
Sbjct: 1   PSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYT 60

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           V+NL   T+Y+F +IA N+ G+  PS     TT
Sbjct: 61  VKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTT 93

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (128), Expect = 1e-09
 Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 2/97 (2%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF 777
           + P +        T + + W  P    +        +  +E   S             ++
Sbjct: 2   SMPASPVLTKAGITWLSLQWSKPS--GTPSDEGISYILEMEEETSGYGFKPKYDGEDLAY 59

Query: 778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814
            +  L++ T+Y+  V+A  S G    S  +   T  D
Sbjct: 60  TVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 96

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (120), Expect = 2e-08
 Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 1/93 (1%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           + P    +     + + +QW +P           +   ++++           ++   T 
Sbjct: 2   SMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYT- 60

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
           + +L   T Y  +V A+ S G    S  V   T
Sbjct: 61  VKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTT 93

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (113), Expect = 1e-07
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 2/90 (2%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE--TYSLTG 681
           P          T ++L WSKP+ +  +     +   +        +     E   Y++  
Sbjct: 4   PASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKN 63

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
           L  +T Y   + A +  G+   +  +   T
Sbjct: 64  LRRSTKYKFKVIAYNSEGKSNPSEVVEFTT 93

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (86), Expect = 6e-04
 Identities = 11/92 (11%), Positives = 27/92 (29%), Gaps = 14/92 (15%)

Query: 296 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVE--------------TYSL 341
           + P    +     + + +QW +P          +   +                   Y++
Sbjct: 2   SMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTV 61

Query: 342 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
             L  +T Y   + A +  G+   +  +   T
Sbjct: 62  KNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTT 93

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (153), Expect = 5e-13
 Identities = 20/89 (22%), Positives = 35/89 (39%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSP 262
           AP +       +  +  +W  PS   + Y ++Y  +  +   + +         + NL P
Sbjct: 4   APQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYP 63

Query: 263 YTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
           Y +YE  + A    G GP SS     T +
Sbjct: 64  YCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 92

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 3e-12
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF 777
             PQN + +   S  I  +W PP     +G  + Y++++   G S+SEA ++      S 
Sbjct: 3   GAPQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLD-SKVPSV 56

Query: 778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
            L  L  + +Y + V A  + G+GP S  ++ RTH+
Sbjct: 57  ELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 92

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 4e-11
 Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-T 542
           AP++   +   S  +   W  P   +G+  GY+V Y        S  E  ++D+   +  
Sbjct: 4   APQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQG---DSESEAHLLDSKVPSVE 57

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
           +++L P+  Y ++V A+ + G GP S+ V  +T Q
Sbjct: 58  LTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 92

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 2e-07
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 2/90 (2%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P++  A       +   W  P+           YW    ++++ H     V +  LT LY
Sbjct: 5   PQNPNAKAAGSRKIHFNWLPPSGKPMGYRVK--YWIQGDSESEAHLLDSKVPSVELTNLY 62

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713
           P   Y + + A   +GEG  +  +  RT Q
Sbjct: 63  PYCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 92

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 1e-06
 Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 10/89 (11%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRI----------GLVETYSLTGLYP 346
           AP++   +   S  +   W  P         K+  +             V +  LT LYP
Sbjct: 4   APQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYP 63

Query: 347 NTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
              Y + + A   +GEG  +  +  RT Q
Sbjct: 64  YCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 92

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 137

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 9e-13
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 197 LLTLPVAPLDVKISEVTATSVRLDWTYPSET------------LLYYVIQYKPKAANTPY 244
              L    +    S++ A +V L W+ PS              L  Y +       +  Y
Sbjct: 14  FEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKY 73

Query: 245 SEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVR 304
             +     T  T+ +L P  +Y   + A  N  +G PS   + TT   EP   P   ++ 
Sbjct: 74  KSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPD-IPNPPRIS 132

Query: 305 PLSS 308
             SS
Sbjct: 133 GPSS 136

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 137

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 5e-10
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 8/127 (6%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN-GQITGYK-----V 517
           G   ++     +  +    +         + + T+V+ W  P +   G+           
Sbjct: 1   GSSGSSGDEETKAFEALL-SNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYG 59

Query: 518 YYTQDQSLPMSAWETQVVDNNQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           Y     S         V    +   T++DL P   Y  +VQA  +   G  S   +  T 
Sbjct: 60  YEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTL 119

Query: 577 QGVPSQP 583
              P  P
Sbjct: 120 SCEPDIP 126

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 137

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 1e-08
 Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 9/132 (6%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVY------- 751
           G   ++     +  + +     + V    + + ++ ++W PP    +             
Sbjct: 1   GSSGSSGDEETKAFEALLSNIVKPV-ASDIQARTVVLTWSPPSSLINGETDESSVPELYG 59

Query: 752 YKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           Y++    TG+     S+     +T+  L++LK   +Y   V A  +   G  S      T
Sbjct: 60  YEVLISSTGKDGKYKSVYV-GEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTT 118

Query: 812 HEDDPSEVCPTQ 823
              +P    P +
Sbjct: 119 LSCEPDIPNPPR 130

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 137

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 7e-08
 Identities = 25/153 (16%), Positives = 36/153 (23%), Gaps = 31/153 (20%)

Query: 568 SAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDL 627
           S     K  + + S      A DIQ   V L WS P+                  +    
Sbjct: 6   SGDEETKAFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVL-- 63

Query: 628 RAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTL 687
                         S     G+    Y                 G     +L  L P   
Sbjct: 64  -------------ISSTGKDGKYKSVYV----------------GEETNITLNDLKPAMD 94

Query: 688 YYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
           Y+  + A+    +G  +      T    P  P 
Sbjct: 95  YHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPN 127

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 137

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 4e-04
 Identities = 13/51 (25%), Positives = 19/51 (37%)

Query: 850 VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRP 900
           V  G    + +  L+P   Y  +V A      G  S+ E   T    P+ P
Sbjct: 76  VYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIP 126

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.4 bits (150), Expect = 2e-12
 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 3/99 (3%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNN 538
           P   P       ++ +T++++W        N  I G+ +YY    S   S ++  +V+ +
Sbjct: 1   PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGD 60

Query: 539 QLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           +   +IS L P T Y I++Q F   G    S  ++ +T+
Sbjct: 61  RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETK 99

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.6 bits (148), Expect = 3e-12
 Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 2/98 (2%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIV--YYKLQFVETGRSDSEASIVTLKN 773
           P A P     + ++ T+I + W   P   +N  I   Y   +  ++         +   +
Sbjct: 1   PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGD 60

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           +    +  L+  T Y I +      G+   S  +   T
Sbjct: 61  RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICET 98

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.8 bits (133), Expect = 3e-10
 Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 8/97 (8%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYK--------PKAANTPYSEISGIIT 252
              P       V  T++ L W Y   +     I               +    ++     
Sbjct: 2   VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDR 61

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
            ++++ +L P T Y+  +   N  G    S+  +  T
Sbjct: 62  YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICET 98

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.9 bits (102), Expect = 5e-06
 Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 6/97 (6%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKP--THSGENIISYELYWNDTYAKAKHHRRI----GLVE 675
           A P       + ET + L W     +++   I  + +Y+  T +      +     G   
Sbjct: 3   AGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRY 62

Query: 676 TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
            +S++ L P T Y I +   +  GE   +  +   TK
Sbjct: 63  WHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETK 99

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.5 bits (101), Expect = 6e-06
 Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 18/99 (18%)

Query: 294 PGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITAKHHRR----------------IGL 335
           P   P       ++ +T++++W        N  I   +                    G 
Sbjct: 1   PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGD 60

Query: 336 VETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 374
              +S++ L P T Y I +   +  GE   +  +   TK
Sbjct: 61  RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETK 99

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.1 bits (87), Expect = 4e-04
 Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 802 PSSYPITIRTHEDDPSEV-------CPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGG 854
           P + P    T   + + +         + N+   +             +   + D+ +G 
Sbjct: 1   PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGD 60

Query: 855 ALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTP 893
               +++ LQP+T Y I++      G+ + S     +T 
Sbjct: 61  RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETK 99

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 2e-12
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 5/103 (4%)

Query: 197 LLTLPVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEIS-GIIT 252
           L  LP  P   ++++VT  SV L W   +        Y+I+   ++ +  +  ++  + T
Sbjct: 12  LSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKT 71

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPA-VITTGETEP 294
           T YTVR L P T Y F + A+N  G   PS  +  + T ++ P
Sbjct: 72  TLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGP 114

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 3e-11
 Identities = 21/99 (21%), Positives = 33/99 (33%), Gaps = 2/99 (2%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P   QV  ++ +++ + W          + Y +                 V      T+
Sbjct: 18  PPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTL-YTV 76

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQGVPS 581
             L P+TIY   V+A    G    S     V+TQ   PS
Sbjct: 77  RGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPS 115

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 2e-10
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 4/119 (3%)

Query: 701 GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG 760
           G++           +PG PP       ++  S+ +SW+P            Y ++     
Sbjct: 1   GSSGSSGKNYDLSDLPG-PPSKPQVTDVTKNSVTLSWQPGT--PGTLPASAYIIEAFSQS 57

Query: 761 RSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP-ITIRTHEDDPSE 818
            S+S  ++      T + +  L+  T Y   V A    G    S     +RT +  PS 
Sbjct: 58  VSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPSS 116

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (119), Expect = 4e-08
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 3/98 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWN--DTYAKAKHHRRIGLVETYSLTG 681
           P   +  D+ + +VTL+W   T       +Y +           +          Y++ G
Sbjct: 19  PSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRG 78

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYVPGA 718
           L PNT+Y   + A +P+G    +P   PVRT+   P +
Sbjct: 79  LRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPSS 116

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 16/118 (13%)

Query: 279 GPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA----------- 327
           G   S          PG  P   QV  ++ +++ + W          +A           
Sbjct: 1   GSSGSSGKNYDLSDLPG-PPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVS 59

Query: 328 ---KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYGKTPG 381
              +          Y++ GL PNT+Y   + A +P+G    +P   PVRT+  G + G
Sbjct: 60  NSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGPSSG 117

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.8 bits (149), Expect = 2e-12
 Identities = 16/89 (17%), Positives = 29/89 (32%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNL 260
            ++ L +K+ +     + L W           + Y+    N        ++     +  L
Sbjct: 3   SLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVLEPRVLLTKL 62

Query: 261 SPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
            P T Y   +  +  LG GP S      T
Sbjct: 63  QPDTTYIVRVRTLTPLGPGPFSPDHEFRT 91

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.9 bits (118), Expect = 3e-08
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 6/96 (6%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
                 ++         + ++W      R+ G  + Y+L  +             +  + 
Sbjct: 2   ESLSGLSLKLVKKEPRQLELTWAGSR-PRNPGGNLSYELHVLNQDEEWH-----QMVLEP 55

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
             +L +L+  T Y + V   T +G GP S     RT
Sbjct: 56  RVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRT 91

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.1 bits (116), Expect = 6e-08
 Identities = 17/96 (17%), Positives = 33/96 (34%), Gaps = 7/96 (7%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEP-ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
              +   +++       + + W        G    Y+++            E   +    
Sbjct: 2   ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQD------EEWHQMVLEP 55

Query: 540 LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
              ++ L P T Y +RV+  T +GPGP S     +T
Sbjct: 56  RVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRT 91

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.4 bits (114), Expect = 9e-08
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 2/90 (2%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTG 681
                L+ V  +   + L W+              Y      + +   ++ L     LT 
Sbjct: 4   LSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLS--YELHVLNQDEEWHQMVLEPRVLLTK 61

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
           L P+T Y + +   +P G G  +P    RT
Sbjct: 62  LQPDTTYIVRVRTLTPLGPGPFSPDHEFRT 91

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.7 bits (89), Expect = 3e-04
 Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 10/90 (11%)

Query: 294 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI----------TAKHHRRIGLVETYSLTG 343
              +   +++       + + W      N               +   ++ L     LT 
Sbjct: 2   ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVLEPRVLLTK 61

Query: 344 LYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
           L P+T Y + +   +P G G  +P    RT
Sbjct: 62  LQPDTTYIVRVRTLTPLGPGPFSPDHEFRT 91

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 2e-12
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWE-PPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKN 773
           +     +  +   L+ T+++++W      +   G+ V Y+        S  +     +  
Sbjct: 14  LGDVLVRLHNPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPT 73

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
           + S VL  LKK   Y I V    +   G  S   T+RT E+  
Sbjct: 74  ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESG 116

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 1e-11
 Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 6/113 (5%)

Query: 475 RTKQYEPGTAP-RDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYY-TQDQSLPMSAWET 532
           R  Q E G    R      L+ +T+ + W         I GY+V Y         S+W+ 
Sbjct: 8   RQVQKELGDVLVRLHNPVVLTPTTVQVTWTVDR-QPQFIQGYRVMYRQTSGLQATSSWQN 66

Query: 533 QVVDNNQLT--TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT-QQGVPSQ 582
                       + +L     Y I+V+ + +   G  S    V+T ++  PS 
Sbjct: 67  LDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESGPSS 119

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 7e-10
 Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 9/106 (8%)

Query: 196 PLLTLPVAPLDVKISEVTATSVRLDWTYPS--ETLLYYVIQYKPKAANTPYS-----EIS 248
            L  + V   +  +  +T T+V++ WT     + +  Y + Y+  +     S     +  
Sbjct: 13  ELGDVLVRLHNPVV--LTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAK 70

Query: 249 GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
                   + NL     YE  +    N  +G  S    + T E   
Sbjct: 71  VPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESG 116

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 4e-06
 Identities = 17/106 (16%), Positives = 29/106 (27%), Gaps = 9/106 (8%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR------RIGLVE 675
              R    V +  T V + W+        I  Y + +  T              ++    
Sbjct: 17  VLVRLHNPVVLTPTTVQVTWTVDRQPQ-FIQGYRVMYRQTSGLQATSSWQNLDAKVPTER 75

Query: 676 TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721
           +  L  L     Y I +       +G  +    VRT +     P  
Sbjct: 76  SAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTE--ESGPSS 119

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 3e-04
 Identities = 14/112 (12%), Positives = 27/112 (24%), Gaps = 19/112 (16%)

Query: 282 SSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHR---------- 331
           S  +     +       R      L+ +T+ + W         I                
Sbjct: 3   SGSSGRQVQKELGDVLVRLHNPVVLTPTTVQVTWTVDR-QPQFIQGYRVMYRQTSGLQAT 61

Query: 332 --------RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                   ++    +  L  L     Y I +       +G  +    VRT +
Sbjct: 62  SSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTE 113

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 5e-04
 Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 4/88 (4%)

Query: 806 PITIRTHEDDPSEVCPTQNDFRKNKKTNGSNFKGGYLNDPMRFDVSDGGALELNVTGLQP 865
           P T++       +    Q      ++T+G      +       D          +  L+ 
Sbjct: 29  PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSW----QNLDAKVPTERSAVLVNLKK 84

Query: 866 DTIYTIQVAALTRKGDGDRSKPETIKTP 893
              Y I+V     +  G  S+ +T++T 
Sbjct: 85  GVTYEIKVRPYFNEFQGMDSESKTVRTT 112

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (148), Expect = 2e-12
 Identities = 23/99 (23%), Positives = 31/99 (31%), Gaps = 2/99 (2%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL 540
           P   P  VQ   LS  T+ I W +   P  Q      YYT      + A       N   
Sbjct: 1   PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 60

Query: 541 T--TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
               ++ L P+T+Y   V           S      T +
Sbjct: 61  LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 99

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (148), Expect = 2e-12
 Identities = 19/99 (19%), Positives = 28/99 (28%), Gaps = 1/99 (1%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQ 774
           P  PP  V    LS  +IRI+W    + +                   +           
Sbjct: 1   PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 60

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
            S+++  LK  T Y   V+          S      T E
Sbjct: 61  LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 99

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (146), Expect = 5e-12
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-------LLYYVIQYKPKAANTPYSEISGIITT 253
            + P+ V+ S ++  ++R+ W   S           YY +++K         + +   T 
Sbjct: 2   MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTL 61

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
            Y V  L P T YEF ++          S  A  TT E
Sbjct: 62  SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 99

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (109), Expect = 6e-07
 Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 5/95 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK-----AKHHRRIGLVETYS 678
           P  ++A  +    + + W+  +      I+   Y+   +        K+        +Y 
Sbjct: 5   PVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYL 64

Query: 679 LTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713
           +TGL PNTLY   +     R     +      T +
Sbjct: 65  VTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 99

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (107), Expect = 9e-07
 Identities = 22/99 (22%), Positives = 30/99 (30%), Gaps = 17/99 (17%)

Query: 294 PGTAPRDVQVRPLSSSTMVIQWDEPETPN-----------------GQITAKHHRRIGLV 336
           P   P  VQ   LS  T+ I W +   P                       K+       
Sbjct: 1   PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 60

Query: 337 ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
            +Y +TGL PNTLY   +     R     +      T +
Sbjct: 61  LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 99

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.1 bits (147), Expect = 3e-12
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSP 262
           +P D+ ++  + TS+ L WT  S  + +Y I + P +  +    +    T+Y T+ +L P
Sbjct: 3   SPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGISSEVTVPRDRTSY-TLTDLEP 61

Query: 263 YTEYEFYIIAVNNLGRGPPSS 283
             EY   I A     +   S+
Sbjct: 62  GAEYIISITAERGRQQSLEST 82

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.6 bits (107), Expect = 7e-07
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P+++     S TSI + W        +G I +Y++ F  +    SE ++    ++TS+ 
Sbjct: 3   SPRDLMVTASSETSISLIWTKA-----SGPIDHYRITFTPSSGISSEVTVPR--DRTSYT 55

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSS 804
           L +L+   EY I + A         S
Sbjct: 56  LTDLEPGAEYIISITAERGRQQSLES 81

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.3 bits (106), Expect = 1e-06
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 6/83 (7%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           +PRD+ V   S +++ + W +   P         Y          + E  V  +    T+
Sbjct: 3   SPRDLMVTASSETSISLIWTKASGPIDH------YRITFTPSSGISSEVTVPRDRTSYTL 56

Query: 544 SDLTPHTIYTIRVQAFTSVGPGP 566
           +DL P   Y I + A        
Sbjct: 57  TDLEPGAEYIISITAERGRQQSL 79

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.9 bits (100), Expect = 6e-06
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           PRDL      ET+++L W+K +     I  Y + +  +   +          +Y+LT L 
Sbjct: 4   PRDLMVTASSETSISLIWTKASG---PIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLE 60

Query: 684 PNTLYYIWLAAQSPRGEGA 702
           P   Y I + A+  R +  
Sbjct: 61  PGAEYIISITAERGRQQSL 79

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.4 bits (83), Expect = 0.001
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 9/77 (11%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRI---------GLVETYSLTGLYPN 347
           +PRD+ V   S +++ + W +   P                         +Y+LT L P 
Sbjct: 3   SPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPG 62

Query: 348 TLYYIWLAAQSPRGEGA 364
             Y I + A+  R +  
Sbjct: 63  AEYIISITAERGRQQSL 79

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (149), Expect = 3e-12
 Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 2/117 (1%)

Query: 707 IPVRTKQYVPGAPPQNVSCEP-LSSTSIRISWEPPPVERSNGHIVYYKLQF-VETGRSDS 764
           +   T    P APPQ+V+ +  ++  +IR+SW PP +  +          + V       
Sbjct: 1   VEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRV 60

Query: 765 EASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCP 821
              I    + T+  L  L+      + V   ++ G+   S    +      P    P
Sbjct: 61  AEVIFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPPTPHP 117

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (141), Expect = 4e-11
 Identities = 19/115 (16%), Positives = 33/115 (28%), Gaps = 3/115 (2%)

Query: 472 IPVRTKQYEPGTAPRDVQVRPLSSSTMV-IQWDEPE--TPNGQITGYKVYYTQDQSLPMS 528
           +   T    P   P+DV V+   +   + + W  P               Y         
Sbjct: 1   VEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRV 60

Query: 529 AWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
           A       ++    +  L       + V+  ++ G    SA   V  +  VP  P
Sbjct: 61  AEVIFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPPTP 115

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (98), Expect = 2e-05
 Identities = 18/104 (17%), Positives = 30/104 (28%), Gaps = 8/104 (7%)

Query: 201 PVAPLDVKI-SEVTATSVRLDWTYPSETLLYYVIQYKP-------KAANTPYSEISGIIT 252
           P  P DV + + VT  ++R+ W  P  T                 K             +
Sbjct: 11  PAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVIFPTADS 70

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGT 296
           T   +  L         +  ++  G    S+ A +      P T
Sbjct: 71  TAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPPT 114

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 13/103 (12%), Positives = 29/103 (28%), Gaps = 6/103 (5%)

Query: 624 PRDLRA-VDIQETAVTLAWSKPTHSGENII--SYELYWNDTYAKAK---HHRRIGLVETY 677
           P+D+     +    + ++W  P  +   +   +    +       +              
Sbjct: 14  PQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVIFPTADSTAV 73

Query: 678 SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720
            L  L       + +   S +GE   +    V  +  VP  P 
Sbjct: 74  ELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPPTPH 116

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (81), Expect = 0.004
 Identities = 14/107 (13%), Positives = 25/107 (23%), Gaps = 18/107 (16%)

Query: 287 ITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVE--------- 337
            +T    P   P+DV V+   +   +     P        +      G            
Sbjct: 3   FSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAE 62

Query: 338 ---------TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                       L  L       + +   S +GE   +    V  + 
Sbjct: 63  VIFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPEL 109

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 3e-12
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 6/98 (6%)

Query: 198 LTLPVAP--LDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAANTPYSEISGII 251
             LP AP      +S V   ++ L WT P    S  + Y +   +  A  T         
Sbjct: 8   RQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPK 67

Query: 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
            T  TV+ L P   Y+F + AVN++G+G  S      +
Sbjct: 68  ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVS 105

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 4e-10
 Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 3/95 (3%)

Query: 484 APRDVQVRP--LSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT 541
           AP         +    + + W +P   N  +  Y +  +++ + P +     V       
Sbjct: 13  APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNA-PWTVLLASVDPKATSV 71

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           T+  L P   Y  R+ A   VG G  S      + 
Sbjct: 72  TVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSL 106

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 1e-08
 Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 3/101 (2%)

Query: 715 VPGAPPQ-NVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKN 773
           +P AP     +   +   +I ++W  P     N  ++ Y L+  E     +         
Sbjct: 10  LPHAPEHPVATLSTVERRAINLTWTKP--FDGNSPLIRYILEMSENNAPWTVLLASVDPK 67

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814
            TS  +  L     Y+  + A   +G G  S      +  +
Sbjct: 68  ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 108

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 8e-06
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 2/87 (2%)

Query: 627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET--YSLTGLYP 684
                ++  A+ L W+KP      +I Y L  ++  A           +    ++ GL P
Sbjct: 19  ATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVP 78

Query: 685 NTLYYIWLAAQSPRGEGATTPPIPVRT 711
              Y   L A +  G+G  +      +
Sbjct: 79  ARSYQFRLCAVNDVGKGQFSKDTERVS 105

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 3e-12
 Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P  P  + IS     +  L W  P E    LL Y +QY       P +   G    ++TV
Sbjct: 1   PGRP-TMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTV 59

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
             L   T Y F + A N  G G      + T 
Sbjct: 60  TGLHKGTTYIFRLAAKNRAGLGEEFEKEIRTP 91

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 5e-11
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P  + +   + +T ++QW  P+   G++ GY++ Y +      +  +    D +   T+
Sbjct: 3   RPTMM-ISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQH--FTV 59

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           + L   T Y  R+ A    G G      +   +
Sbjct: 60  TGLHKGTTYIFRLAAKNRAGLGEEFEKEIRTPE 92

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 1e-10
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
           PG P   +S    +  +  + W PP  +   G ++ Y+LQ+     +         K+  
Sbjct: 1   PGRPTMMIS--TTAMNTALLQWHPP--KELPGELLGYRLQYCRADEARPNTIDFG-KDDQ 55

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814
            F +  L K T Y   + A    G G       IRT ED
Sbjct: 56  HFTVTGLHKGTTYIFRLAAKNRAGLGEEF-EKEIRTPED 93

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 2e-06
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 2/90 (2%)

Query: 627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET-YSLTGLYPN 685
           +           L W  P      ++ Y L +        +    G  +  +++TGL+  
Sbjct: 6   MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKG 65

Query: 686 TLYYIWLAAQSPRGEGATTPPIPVRTKQYV 715
           T Y   LAA++  G G       +RT + +
Sbjct: 66  TTYIFRLAAKNRAGLGEEFEKE-IRTPEDL 94

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.001
 Identities = 8/60 (13%), Positives = 16/60 (26%), Gaps = 1/60 (1%)

Query: 580 PSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTL 639
           P +P  +           L W  P      ++ Y L +        +       +   T+
Sbjct: 1   PGRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTV 59

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.3 bits (148), Expect = 4e-12
 Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 8/101 (7%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYPSE---TLLYYVIQYKPKAAN---TPYSEISGII 251
           L+ P AP    IS  + TSV + W         +  + ++YK           +      
Sbjct: 8   LSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPS 67

Query: 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP--AVITTG 290
                +  L     Y+F + A+N LG   PS+P    + +G
Sbjct: 68  RLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSG 108

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.1 bits (137), Expect = 1e-10
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 1/94 (1%)

Query: 478 QYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDN 537
           +  P  AP    +   S +++ + W         I  ++V Y + + +      T  +  
Sbjct: 7   RLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPP 66

Query: 538 NQLT-TISDLTPHTIYTIRVQAFTSVGPGPLSAP 570
           ++L+  I+ L     Y  RV+A   +G    SAP
Sbjct: 67  SRLSVEITGLEKGISYKFRVRALNMLGESEPSAP 100

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.8 bits (126), Expect = 4e-09
 Identities = 17/94 (18%), Positives = 34/94 (36%)

Query: 713 QYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK 772
           +  P   P   +    S TS+ ++W P             + + ++       A+     
Sbjct: 7   RLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPP 66

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP 806
           ++ S  +  L+K   Y+  V A   +G+   S P
Sbjct: 67  SRLSVEITGLEKGISYKFRVRALNMLGESEPSAP 100

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (97), Expect = 3e-05
 Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 5/94 (5%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW----NDTYAKAKHHRRIGLVETYSL 679
           P         ET+V + W    + G  I S+ + +                     +  +
Sbjct: 14  PDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEI 73

Query: 680 TGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTK 712
           TGL     Y   + A +  GE   + P  P    
Sbjct: 74  TGLEKGISYKFRVRALNMLGESEPSAPSRPYVVS 107

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (89), Expect = 4e-04
 Identities = 16/104 (15%), Positives = 27/104 (25%), Gaps = 17/104 (16%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAK----------------HHR 331
             G   P  AP    +   S +++ + W         I +                    
Sbjct: 4   DHGRLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA 63

Query: 332 RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTK 374
                 +  +TGL     Y   + A +  GE   + P  P    
Sbjct: 64  IPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVS 107

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 5e-12
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGII-TTYYTVRNLS 261
           AP +++    T  S+ + W  P   +  Y+I+Y+   +             T  T+  L 
Sbjct: 3   APSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLE 62

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVIT 288
           P TEY  Y+IA+ N  +  P      T
Sbjct: 63  PGTEYTIYVIALKNNQKSEPLIGRKKT 89

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 3e-07
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 4/83 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           AP +++    + +++++ W  P      ITGY + Y +  S P            + T I
Sbjct: 3   APSNLRFLATTPNSLLVSWQPPRAR---ITGYIIKYEKPGSPPREVVPRPRPGVTEAT-I 58

Query: 544 SDLTPHTIYTIRVQAFTSVGPGP 566
           + L P T YTI V A  +     
Sbjct: 59  TGLEPGTEYTIYVIALKNNQKSE 81

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 5e-07
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 5/84 (5%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P N+     +  S+ +SW+PP        I  Y +++ + G    E         T   
Sbjct: 3   APSNLRFLATTPNSLLVSWQPPRAR-----ITGYIIKYEKPGSPPREVVPRPRPGVTEAT 57

Query: 779 LDELKKWTEYRIWVLAGTSIGDGP 802
           +  L+  TEY I+V+A  +     
Sbjct: 58  ITGLEPGTEYTIYVIALKNNQKSE 81

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 5/80 (6%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA--KHHRRIGLVETYSLTG 681
           P +LR +     ++ ++W  P      I  Y + +    +       R    V   ++TG
Sbjct: 4   PSNLRFLATTPNSLLVSWQPPRA---RITGYIIKYEKPGSPPREVVPRPRPGVTEATITG 60

Query: 682 LYPNTLYYIWLAAQSPRGEG 701
           L P T Y I++ A     + 
Sbjct: 61  LEPGTEYTIYVIALKNNQKS 80

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 6e-12
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT-TYYTVRNLS 261
           AP D+K ++VT TS+   WT P+  L  Y ++  PK    P  EI+     +   V  L 
Sbjct: 2   APTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLM 61

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVITT 289
             T+YE  + A+ +     P+   V T 
Sbjct: 62  VATKYEVSVYALKDTLTSRPAQGVVTTL 89

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 6e-07
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P ++    ++ TS+   W PP V      +  Y+++     ++     I    + +S V
Sbjct: 2   APTDLKFTQVTPTSLSAQWTPPNV-----QLTGYRVRVTPKEKTGPMKEINLAPDSSSVV 56

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSS 804
           +  L   T+Y + V A         +
Sbjct: 57  VSGLMVATKYEVSVYALKDTLTSRPA 82

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 3e-06
 Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 4/93 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           AP D++   ++ +++  QW    TP              +       E  +  ++    +
Sbjct: 2   APTDLKFTQVTPTSLSAQW----TPPNVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVV 57

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           S L   T Y + V A         +  V+   +
Sbjct: 58  SGLMVATKYEVSVYALKDTLTSRPAQGVVTTLE 90

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 4e-04
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 1/78 (1%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P DL+   +  T+++  W+ P                T    K         +  ++GL 
Sbjct: 3   PTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKT-GPMKEINLAPDSSSVVVSGLM 61

Query: 684 PNTLYYIWLAAQSPRGEG 701
             T Y + + A       
Sbjct: 62  VATKYEVSVYALKDTLTS 79

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.8 bits (141), Expect = 2e-11
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT-TYYTVRNLS 261
           AP  +++ +VT T+  + W  P   +    + Y  K      + I        Y++ NL 
Sbjct: 4   APSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLK 63

Query: 262 PYTEYEFYIIAVNNLGRGPPSSPAVIT 288
           P TEYE  +I+        P+     T
Sbjct: 64  PDTEYEVSLISRRGDMSSNPAKETFTT 90

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 3e-06
 Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           AP  ++V+ ++ +T +I W     P  +I G ++ Y              + ++    +I
Sbjct: 4   APSQIEVKDVTDTTALITWF---KPLAEIDGIELTYGIKDVPGDRTTID-LTEDENQYSI 59

Query: 544 SDLTPHTIYTIRVQAFTSVGPGP 566
            +L P T Y + + +        
Sbjct: 60  GNLKPDTEYEVSLISRRGDMSSN 82

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 1e-05
 Identities = 15/93 (16%), Positives = 34/93 (36%), Gaps = 6/93 (6%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P  +  + ++ T+  I+W  P        I   +L +          +I   +++  + 
Sbjct: 4   APSQIEVKDVTDTTALITWFKPLA-----EIDGIELTYGIKDVPGDRTTIDLTEDENQYS 58

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           +  LK  TEY + +++         +   T  T
Sbjct: 59  IGNLKPDTEYEVSLISRRGDMSSNPAK-ETFTT 90

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 1/78 (1%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P  +   D+ +T   + W KP    + I        D                YS+  L 
Sbjct: 5   PSQIEVKDVTDTTALITWFKPLAEIDGIE-LTYGIKDVPGDRTTIDLTEDENQYSIGNLK 63

Query: 684 PNTLYYIWLAAQSPRGEG 701
           P+T Y + L ++      
Sbjct: 64  PDTEYEVSLISRRGDMSS 81

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 2e-11
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 3/90 (3%)

Query: 203 APLDVKISEVTATSVRLDWT-YPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTVRNL 260
            P D++ + +   ++R+ W   PS  L  ++++Y P       +E+S         + NL
Sbjct: 3   PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNL 62

Query: 261 SPYTEYEFYIIAVNNLGRGPPSSPAVITTG 290
            P TEY   + +V       P       TG
Sbjct: 63  LPGTEYVVSVSSVYEQHESTPLR-GRQKTG 91

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 7e-09
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 7/93 (7%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
           PP ++    +   ++R++W PPP       +V Y          +  A +    +  + V
Sbjct: 3   PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYS----PVKNEEDVAELSISPSDNAVV 58

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           L  L   TEY + V +     +     P+  R 
Sbjct: 59  LTNLLPGTEYVVSVSSVYEQHEST---PLRGRQ 88

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 2e-07
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P D++   +   TM + W  P  P+  +T + V Y           E  +  ++    +
Sbjct: 3   PPTDLRFTNIGPDTMRVTWAPP--PSIDLTNFLVRY-SPVKNEEDVAELSISPSDNAVVL 59

Query: 544 SDLTPHTIYTIRVQAFTSVGPGP 566
           ++L P T Y + V +        
Sbjct: 60  TNLLPGTEYVVSVSSVYEQHEST 82

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 7e-05
 Identities = 17/89 (19%), Positives = 27/89 (30%), Gaps = 3/89 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P DLR  +I    + + W+ P                                  LT L 
Sbjct: 4   PTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLL 63

Query: 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
           P T Y + +++   + E     P+  R K
Sbjct: 64  PGTEYVVSVSSVYEQHES---TPLRGRQK 89

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (143), Expect = 3e-11
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 6/113 (5%)

Query: 195 APLLTLPVAPLDVKISEVTATSVRLDWTYPSE-----TLLYYVIQYKPKAANTPYSEISG 249
           AP+  +P  P D+++++    SV+L WT   +     T      +         + +   
Sbjct: 11  APVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV 70

Query: 250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITTGETEPGTAPRDV 301
             T      NLSPY  Y F ++AVN++G+  PS       T  +EP   P   
Sbjct: 71  SGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSG 123

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (138), Expect = 1e-10
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 1/119 (0%)

Query: 466 GATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSL 525
           G++    P     Y+    P D+++      ++ + W   +  N  IT + + Y      
Sbjct: 1   GSSGSSGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHK 60

Query: 526 PMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVL-VKTQQGVPSQP 583
           P        V   Q T   +L+P+  Y+ RV A  S+G    S       T+   P + 
Sbjct: 61  PGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKN 119

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (115), Expect = 2e-07
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLV---E 675
           D    P DL   D  + +V L+W+    +   I  + + + D   K         V   +
Sbjct: 15  DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQ 74

Query: 676 TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI-PVRTKQYVPGAPPQNVS 724
           T +   L P   Y   + A +  G+   +       TK   P   P +  
Sbjct: 75  TTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGP 124

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (115), Expect = 2e-07
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 4/120 (3%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++ P P      VP  PP ++        S+++SW P     S       + +   
Sbjct: 1   GSSGSSGPTPA-PVYDVPN-PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAM 58

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPI-TIRTHEDDPS 817
             +         +    +     L  +  Y   V+A  SIG    S       T   +P 
Sbjct: 59  H-KPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPD 117

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 6e-11
 Identities = 18/96 (18%), Positives = 36/96 (37%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
               V      ++ + + W EP+ PNG I  Y+V Y +     +   +T+     +    
Sbjct: 7   IVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCR 66

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGV 579
                   Y++R++A +  G G  + P        +
Sbjct: 67  LRGLSPGNYSVRIRATSLAGNGSWTEPTYFYVTDYL 102

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 3e-08
 Identities = 10/95 (10%), Positives = 25/95 (26%), Gaps = 1/95 (1%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
               V+ E   +  + + W+ P        +     +           +      +    
Sbjct: 7   IVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCR 66

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813
           L  L       + + A +  G+G  + P      +
Sbjct: 67  LRGLSPGNYS-VRIRATSLAGNGSWTEPTYFYVTD 100

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 13/96 (13%), Positives = 17/96 (17%), Gaps = 5/96 (5%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSE-----TLLYYVIQYKPKAANTPYSEISGIITTYY 255
                 V         V L W  P E      L     +                     
Sbjct: 5   DDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERG 64

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291
                     Y   I A +  G G  + P      +
Sbjct: 65  CRLRGLSPGNYSVRIRATSLAGNGSWTEPTYFYVTD 100

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 8e-05
 Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 3/95 (3%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW---NDTYAKAKHHRRIGLVETYSLT 680
              +     +   V L W +P      I+ YE+ +    D        R+   +E     
Sbjct: 8   VGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRL 67

Query: 681 GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYV 715
                  Y + + A S  G G+ T P       Y+
Sbjct: 68  RGLSPGNYSVRIRATSLAGNGSWTEPTYFYVTDYL 102

>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

 Score = 57.5 bits (138), Expect = 6e-11
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 4/89 (4%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLD 163
            P++   P  ++ V     + + C   G P P V W    N +     +  V  + L + 
Sbjct: 2   APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWS--HNAKPLSGGRATVTDSGLVIK 59

Query: 164 RVTESE--NYTCIAASVLGVIETSTIVKV 190
            V   +   Y C A +  G     T+V+V
Sbjct: 60  GVKNGDKGYYGCRATNEHGDKYFETLVQV 88

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.7 bits (138), Expect = 6e-11
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS-GIITTYYT 256
           + +   P  + + +V+ T   ++WT P   + + +++Y         +        + Y+
Sbjct: 1   IPVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPPLSQYS 60

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288
           V+ L P + YE  I AV        SS    T
Sbjct: 61  VQALRPGSRYEVSISAVRGTNESDASSTQFTT 92

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.8 bits (102), Expect = 4e-06
 Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 5/86 (5%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P  +    +S T   + W PP        + +  L++   G    + +       + + 
Sbjct: 6   GPTQILVRDVSDTVAFVEWTPP-----RAKVDFILLKYGLVGGEGGKTTFRLQPPLSQYS 60

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSS 804
           +  L+  + Y + + A     +  +S
Sbjct: 61  VQALRPGSRYEVSISAVRGTNESDAS 86

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.4 bits (101), Expect = 6e-06
 Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 4/85 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P  + VR +S +   ++W  P     ++    + Y                  +Q  ++
Sbjct: 6   GPTQILVRDVSDTVAFVEWTPP---RAKVDFILLKYGLVGGEGGKTTFRLQPPLSQ-YSV 61

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLS 568
             L P + Y + + A         S
Sbjct: 62  QALRPGSRYEVSISAVRGTNESDAS 86

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.3 bits (80), Expect = 0.004
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P  +   D+ +T   + W  P  +  + I  +             R    +  YS+  L 
Sbjct: 7   PTQILVRDVSDTVAFVEW-TPPRAKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALR 65

Query: 684 PNTLYYIWLAAQSPRGEG 701
           P + Y + ++A     E 
Sbjct: 66  PGSRYEVSISAVRGTNES 83

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (140), Expect = 8e-11
 Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 27/120 (22%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSN---GHIVYYK-------------------LQF 756
                S    S   I + WEP          G +++YK                      
Sbjct: 4   ELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWT 63

Query: 757 VETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGD-----GPSSYPITIRT 811
           V        ++    +N   +++  LK WT+Y I+V    +  D     G  S  I ++T
Sbjct: 64  VVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQT 123

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (131), Expect = 1e-09
 Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 28/121 (23%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETP-NGQITGYKVYYTQDQSLPMSAWETQVVDNNQL- 540
                      S   ++++W+    P    + G+ ++Y +     ++ ++ Q    +   
Sbjct: 3   NELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSW 62

Query: 541 ---------------------TTISDLTPHTIYTIRVQAFTSVG-----PGPLSAPVLVK 574
                                  +  L P T Y I V+   +        G  S  + V+
Sbjct: 63  TVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQ 122

Query: 575 T 575
           T
Sbjct: 123 T 123

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (111), Expect = 5e-07
 Identities = 14/139 (10%), Positives = 39/139 (28%), Gaps = 22/139 (15%)

Query: 580 PSQPRDLRAVDIQETAVTLAWSKPTHS-GENIISYELYWNDTYAKPRDLRAVDIQETAVT 638
            ++      +      + L W         +++ + L++ +   +               
Sbjct: 2   ENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQN-------------- 47

Query: 639 LAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR 698
              ++         +     +       +  +      + + GL P T Y I++      
Sbjct: 48  --VTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTF 105

Query: 699 GE-----GATTPPIPVRTK 712
            +     GA +  I V+T 
Sbjct: 106 SDERRTYGAKSDIIYVQTD 124

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 3e-06
 Identities = 15/122 (12%), Positives = 30/122 (24%), Gaps = 33/122 (27%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPK------------------ 238
               L       +   + L W          LL +++ YK                    
Sbjct: 2   ENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNS 61

Query: 239 ------AANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG-----RGPPSSPAVI 287
                       ++        + +R L P+T+Y  ++  +          G  S    +
Sbjct: 62  WTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYV 121

Query: 288 TT 289
            T
Sbjct: 122 QT 123

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (94), Expect = 9e-05
 Identities = 20/144 (13%), Positives = 39/144 (27%), Gaps = 27/144 (18%)

Query: 296 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLA 355
                      S   ++++W+    P+ +        +G +  Y        T +    A
Sbjct: 3   NELLKFSYIRTSFDKILLRWEPYWPPDFRDL------LGFMLFYKEAPYQNVTEFDGQDA 56

Query: 356 AQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLA 415
             S         P                    +  +      + + GL P T Y I++ 
Sbjct: 57  CGSNSWTVVDIDP----------------PLRSNDPKSQNHPGWLMRGLKPWTQYAIFVK 100

Query: 416 AQSPRGE-----GATTPPIPVRTK 434
                 +     GA +  I V+T 
Sbjct: 101 TLVTFSDERRTYGAKSDIIYVQTD 124

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (137), Expect = 9e-11
 Identities = 22/92 (23%), Positives = 31/92 (33%), Gaps = 3/92 (3%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P     +     T  S+ L W  P +    +L Y I+Y  K  N   S ++   T    +
Sbjct: 1   PSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARI 60

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
             L P   Y   + A    G G  S      T
Sbjct: 61  DGLRPGMVYVVQVRARTVAGYGKFSGKMCFQT 92

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (136), Expect = 1e-10
 Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 4/99 (4%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
           P   P  +     +  SI +SW  P        I+            +   S +      
Sbjct: 1   PSTVP-IMHQVSATMRSITLSWPQPE---QPNGIILDYEIRYYEKEHNEFNSSMARSQTN 56

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814
           +  +D L+    Y + V A T  G G  S  +  +T  D
Sbjct: 57  TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD 95

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (134), Expect = 2e-10
 Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 2/92 (2%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
               +     +  ++ + W +PE PNG I  Y++ Y + +        +          I
Sbjct: 3   TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKE--HNEFNSSMARSQTNTARI 60

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
             L P  +Y ++V+A T  G G  S  +  +T
Sbjct: 61  DGLRPGMVYVVQVRARTVAGYGKFSGKMCFQT 92

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (113), Expect = 1e-07
 Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 1/89 (1%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET-YSLTGL 682
              +  V     ++TL+W +P      I+ YE+ + +      +            + GL
Sbjct: 4   VPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGL 63

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
            P  +Y + + A++  G G  +  +  +T
Sbjct: 64  RPGMVYVVQVRARTVAGYGKFSGKMCFQT 92

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (93), Expect = 6e-05
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 13/90 (14%)

Query: 297 APRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVET-------------YSLTG 343
               +     +  ++ + W +PE PNG I     R                      + G
Sbjct: 3   TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDG 62

Query: 344 LYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
           L P  +Y + + A++  G G  +  +  +T
Sbjct: 63  LRPGMVYVVQVRARTVAGYGKFSGKMCFQT 92

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

 Score = 56.3 bits (135), Expect = 1e-10
 Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 6/90 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNL 260
           P AP ++  +  T +S+ L WT  ++ +                +  + +  T  T+  L
Sbjct: 4   PTAPTNLASTAQTTSSITLSWTASTDNVGVTGYDVYNG-----TALATTVTGTTATISGL 58

Query: 261 SPYTEYEFYIIAVNNLG-RGPPSSPAVITT 289
           +  T Y F + A +  G     S+   + T
Sbjct: 59  AADTSYTFTVKAKDAAGNVSAASNAVSVKT 88

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

 Score = 45.2 bits (106), Expect = 1e-06
 Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 11/94 (11%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           TAP ++     ++S++ + W       G +TGY VY                V     T 
Sbjct: 5   TAPTNLASTAQTTSSITLSWTASTDNVG-VTGYDVYNGT--------ALATTVTGTTAT- 54

Query: 543 ISDLTPHTIYTIRVQAFTSVG-PGPLSAPVLVKT 575
           IS L   T YT  V+A  + G     S  V VKT
Sbjct: 55  ISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

 Score = 41.3 bits (96), Expect = 3e-05
 Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 12/99 (12%)

Query: 714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKN 773
           ++    P N++    +++SI +SW        N  +  Y +            ++ T   
Sbjct: 1   HMAPTAPTNLASTAQTTSSITLSWTAST---DNVGVTGYDVYN--------GTALATTVT 49

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGD-GPSSYPITIRT 811
            T+  +  L   T Y   V A  + G+   +S  ++++T
Sbjct: 50  GTTATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

 Score = 38.6 bits (89), Expect = 2e-04
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 296 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVET-----YSLTGLYPNTLY 350
           TAP ++     ++S++ + W       G      +    L  T      +++GL  +T Y
Sbjct: 5   TAPTNLASTAQTTSSITLSWTASTDNVGVTGYDVYNGTALATTVTGTTATISGLAADTSY 64

Query: 351 YIWLAAQSPRG-EGATTPPIPVRT 373
              + A+   G   A +  + V+T
Sbjct: 65  TFTVKAKDAAGNVSAASNAVSVKT 88

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

 Score = 37.1 bits (85), Expect = 8e-04
 Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 8/89 (8%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLY 683
           P +L +     +++TL+W+  T +                            T +++GL 
Sbjct: 7   PTNLASTAQTTSSITLSWTASTDNVGVTGYDVYNGTALATTVTGT-------TATISGLA 59

Query: 684 PNTLYYIWLAAQSPRG-EGATTPPIPVRT 711
            +T Y   + A+   G   A +  + V+T
Sbjct: 60  ADTSYTFTVKAKDAAGNVSAASNAVSVKT 88

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.1 bits (134), Expect = 3e-10
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITT-YY 255
             AP  + + +VT T+  L W  P       +  Y+++Y  + +          +    +
Sbjct: 2   TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGF 61

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           TV++L       F ++ VN  GR  P++     T
Sbjct: 62  TVKDLPTGARILFRVVGVNIAGRSEPATLLQPVT 95

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.0 bits (121), Expect = 1e-08
 Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
           P + PQ+++ E ++ T+  + W PP      G I  Y +++   G  +   +      + 
Sbjct: 1   PTSAPQHLTVEDVTDTTTTLKWRPPDRIG-AGGIDGYLVEYCLEGSEEWVPANKEPVERC 59

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSY---PITIR 810
            F + +L         V+     G    +    P+TIR
Sbjct: 60  GFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIR 97

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.7 bits (120), Expect = 2e-08
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPN-GQITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           P +AP+ + V  ++ +T  ++W  P+    G I GY V Y  + S        + V+   
Sbjct: 1   PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCG 60

Query: 540 LTTISDLTPHTIYTIRVQAFTSVGPGP---LSAPVLVK 574
            T + DL        RV      G      L  PV ++
Sbjct: 61  FT-VKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIR 97

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.7 bits (102), Expect = 4e-06
 Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 4/94 (4%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISY---ELYWNDTYAKAKHHRRIGLVETYSLT 680
           P+ L   D+ +T  TL W  P   G   I     E     +      ++       +++ 
Sbjct: 5   PQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVK 64

Query: 681 GLYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTKQ 713
            L         +   +  G     T   PV  ++
Sbjct: 65  DLPTGARILFRVVGVNIAGRSEPATLLQPVTIRE 98

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.6 bits (135), Expect = 3e-10
 Identities = 18/108 (16%), Positives = 31/108 (28%), Gaps = 15/108 (13%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVD------- 536
           AP  V++   +   + + W+ P +P+G I  Y  Y     +         V         
Sbjct: 10  APSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLK 68

Query: 537 -------NNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
                          D T       R+ A    G GP +    ++   
Sbjct: 69  TSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNS 116

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.7 bits (112), Expect = 4e-07
 Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 19/121 (15%)

Query: 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT 770
           +    PG  P  V     +   I +SWEPP     +G+I+ Y            +     
Sbjct: 3   SGSSGPG-APSTVRISK-NVDGIHLSWEPP--TSPSGNILEYSAYLAIRTAQMQDNPSQL 58

Query: 771 L---------------KNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDD 815
           +                 Q +    +          + A    G GP++    ++ +   
Sbjct: 59  VFMRIYCGLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118

Query: 816 P 816
            
Sbjct: 119 G 119

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.5 bits (109), Expect = 1e-06
 Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 20/115 (17%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSE---TLLYYVIQYKPKAANTPYSEISGII---- 251
           + P AP  V+IS      + L W  P+     +L Y      + A    +    +     
Sbjct: 6   SGPGAPSTVRIS-KNVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIY 64

Query: 252 ------------TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
                              + +      F I A N  G GP +    +       
Sbjct: 65  CGLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKSG 119

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 18/146 (12%), Positives = 36/146 (24%), Gaps = 27/146 (18%)

Query: 575 TQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQE 634
           +    P  P  +R +      + L+W  PT    NI+ Y  Y                  
Sbjct: 3   SGSSGPGAPSTVR-ISKNVDGIHLSWEPPTSPSGNILEYSAYLAIR-------------- 47

Query: 635 TAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAA 694
                     T   ++  S  ++                    +             ++A
Sbjct: 48  ----------TAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDYTSRPAIVFRISA 97

Query: 695 QSPRGEGATTPPIPVRTKQYVPGAPP 720
           ++ +G G  T    ++        P 
Sbjct: 98  KNEKGYGPATQIRWLQGNS--KSGPS 121

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.8 bits (89), Expect = 5e-04
 Identities = 15/117 (12%), Positives = 34/117 (29%), Gaps = 31/117 (26%)

Query: 288 TTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT--------------------- 326
           ++G + PG AP  V++   +   + + W+ P +P+G I                      
Sbjct: 2   SSGSSGPG-APSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLV 59

Query: 327 --------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375
                                +             ++A++ +G G  T    ++   
Sbjct: 60  FMRIYCGLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNS 116

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 4e-10
 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 6/93 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITTYYT 256
           P  P  +      A  ++L W  P       +  Y ++  P   + P     G      T
Sbjct: 4   PCLPPRL-QGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVEC-T 61

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           V +L P   Y F + A N +G GP S    ITT
Sbjct: 62  VSSLLPGKTYSFRLRAANKMGFGPFSEKCDITT 94

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 2e-08
 Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 5/100 (5%)

Query: 481 PGTAPRDVQVRPLSSSTMV-IQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVVDNN 538
           P       +++    +  + ++W  P    G  I+ Y V  +  +             + 
Sbjct: 1   PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQG---SE 57

Query: 539 QLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQG 578
              T+S L P   Y+ R++A   +G GP S    + T  G
Sbjct: 58  VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPG 97

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 1e-05
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 716 PGAP-PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
           PG   P  +   P  +  I++ W PP V+     I  Y ++     + +         ++
Sbjct: 2   PGPCLPPRLQGRP-KAKEIQLRWGPPLVD-GGSPISCYSVEMSPIEKDEPREVYQG--SE 57

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
               +  L     Y   + A   +G GP S    I T
Sbjct: 58  VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITT 94

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 1e-05
 Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 1/84 (1%)

Query: 629 AVDIQETAVTLAWSKPTHS-GENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTL 687
               +   + L W  P    G  I  Y +  +            G     +++ L P   
Sbjct: 11  QGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKT 70

Query: 688 YYIWLAAQSPRGEGATTPPIPVRT 711
           Y   L A +  G G  +    + T
Sbjct: 71  YSFRLRAANKMGFGPFSEKCDITT 94

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (132), Expect = 5e-10
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 11/104 (10%)

Query: 200 LPVAPLDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAANTPYSEISGIITT-- 253
           +P  P  +  + V++T  +L W  P     E   Y V        N P   +  ++    
Sbjct: 2   VPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNP 61

Query: 254 ---YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
                 + NL     Y + + A N  G GP     +     T+P
Sbjct: 62  KNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLA--TQP 103

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (124), Expect = 4e-09
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVD----NNQ 539
            P  +    +SS+   + W EP   NG+IT Y+V Y             + V      N+
Sbjct: 5   EPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNR 64

Query: 540 LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
           +  I +L     Y   V+A    G GP    ++    Q
Sbjct: 65  MLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQ 102

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (106), Expect = 1e-06
 Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 5/101 (4%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNG---HIVYYKLQFVETGRSDSEASIVTL 771
           VP   P  ++   +SST  ++SW  P           + Y  +          +  +V  
Sbjct: 2   VPS-EPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDN 60

Query: 772 KNQTSFVLDELKKWTEYRIWVLAGTSIGDGP-SSYPITIRT 811
                 +++ L++   YR  V A    G GP     I + T
Sbjct: 61  PKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLAT 101

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (87), Expect = 6e-04
 Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 8/102 (7%)

Query: 619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVET-- 676
           +  ++P  L    +  T   L+W++P  +   I +YE+ +       +    +  V    
Sbjct: 1   EVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDN 60

Query: 677 -----YSLTGLYPNTLYYIWLAAQSPRGEG-ATTPPIPVRTK 712
                  +  L  +  Y   + A++  G G      I + T+
Sbjct: 61  PKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQ 102

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 6e-10
 Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 10/101 (9%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETL---------LYYVIQYKPKAANTPYSEISG 249
            LP  P ++ IS +   SV L +    +               +  + +     +   + 
Sbjct: 9   ELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNE 68

Query: 250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP-AVITT 289
                  V +L+P+T Y F +  VN +G  PPS P   I T
Sbjct: 69  PDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 109

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 5/104 (4%)

Query: 479 YEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNN 538
            E    P ++ +  +   ++ +Q+         I+ + V            W      +N
Sbjct: 8   PELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSN 67

Query: 539 QLTT----ISDLTPHTIYTIRVQAFTSVGPGPLSAP-VLVKTQQ 577
           +       + DL P T Y+ R++    VG  P S P   ++T Q
Sbjct: 68  EPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQ 111

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 1e-06
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 5/101 (4%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD---SEASIVTL 771
           +PG PP N+    +   S+ + + P    +++      + Q    G  +       +   
Sbjct: 10  LPG-PPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNE 68

Query: 772 KNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP-ITIRT 811
            +  S  + +L  +T Y   +     +G  P S P   I+T
Sbjct: 69  PDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT 109

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 3e-05
 Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 8/98 (8%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW-------NDTYAKAKHHRRIGLVET 676
           P +L   +I   +VTL +        +I  + +          + +             +
Sbjct: 14  PTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARS 73

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQ 713
             +  L P T Y   +   +  G    + P   ++T Q
Sbjct: 74  MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQ 111

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 0.001
 Identities = 15/111 (13%), Positives = 33/111 (29%), Gaps = 23/111 (20%)

Query: 287 ITTG--ETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRI----------- 333
           I++G     PG  P ++ +  +   ++ +Q+         I+                  
Sbjct: 2   ISSGVPPELPG-PPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWL 60

Query: 334 --------GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQ 375
                       +  +  L P T Y   +   +  G    + P   ++T Q
Sbjct: 61  LIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQ 111

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (132), Expect = 6e-10
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 6/93 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET----LLYYVIQYKPKAANTPYSEISGIITTYYT 256
           PV P      ++ + S ++ W  P +     +  YV++    +    +  I    T  + 
Sbjct: 14  PVKP--SVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHL 71

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
              L+P   Y   +  +++ G+   S   ++ T
Sbjct: 72  CDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 104

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (121), Expect = 2e-08
 Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 2/103 (1%)

Query: 709 VRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASI 768
             T    PG P +      + S S +I+W+PP    + G  +   +  +  G + ++  +
Sbjct: 4   FTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPK--DNGGATINKYVVEMAEGSNGNKWEM 61

Query: 769 VTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           +        + D L     YR+ V   +  G    S  + ++T
Sbjct: 62  IYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 104

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (117), Expect = 5e-08
 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 1/102 (0%)

Query: 474 VRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ 533
             T   +PG   +      + S +  I WD P+   G      V    + S     WE  
Sbjct: 4   FTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNK-WEMI 62

Query: 534 VVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
                +      L P   Y +RV   +  G   +S  +LV+T
Sbjct: 63  YSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 104

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 7e-04
 Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 2/90 (2%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI--GLVETYSLTG 681
            +      I   +  + W  P  +G   I+  +      +       I  G    +    
Sbjct: 15  VKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDR 74

Query: 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRT 711
           L P   Y + +   S  G+ A +  + V+T
Sbjct: 75  LNPGCFYRLRVYCISDGGQSAVSESLLVQT 104

>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 54.4 bits (130), Expect = 7e-10
 Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVL 160
           R+  P      PA    +    + L C A G+P+P +KWRK          K      +L
Sbjct: 1   RQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGS---QTSKWLSSEPLL 57

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
            +  V   +   Y C A ++ G       + + 
Sbjct: 58  HIQNVDFEDEGTYECEAENIKGRDTYQGRIIIH 90

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (131), Expect = 9e-10
 Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 6/120 (5%)

Query: 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758
           G   ++  + V TK+  P  PP NV     + T + ++WE      +   +  YK+ +  
Sbjct: 1   GSSGSSGTVNVTTKKTPPSQPPGNVVW-NATDTKVLLNWEQVKAMENESEVTGYKVFY-- 57

Query: 759 TGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITI-RTHEDDPS 817
             R+ S+ ++  L    +     L    +Y I V A T  GDG SS  I I R     PS
Sbjct: 58  --RTSSQNNVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGPS 115

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (126), Expect = 3e-09
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSS-TMVIQWDEPETPNGQITGYKVYYTQD 522
           G   ++  + V TK+  P   P +V      +   +  +  +      ++TGYKV+Y   
Sbjct: 1   GSSGSSGTVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRT- 59

Query: 523 QSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLV-KTQQGVPS 581
                S    QV++ N+ +    L     Y I V+A T  G G  S  + + +     PS
Sbjct: 60  ----SSQNNVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGPS 115

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (82), Expect = 0.003
 Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 13/109 (11%)

Query: 277 GRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHR----- 331
           G    S    +TT +T P   P    V   + + +++ W++ +    +     ++     
Sbjct: 1   GSSGSSGTVNVTTKKTPPS-QPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRT 59

Query: 332 -------RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 373
                   +   +T +   L     Y I + A +  G+G ++  I +  
Sbjct: 60  SSQNNVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPR 108

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (81), Expect = 0.004
 Identities = 23/123 (18%), Positives = 36/123 (29%), Gaps = 13/123 (10%)

Query: 180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDW-----TYPSETLLYYVIQ 234
           G   +S  V V  K  P    P  P    +   T T V L+W           +  Y + 
Sbjct: 1   GSSGSSGTVNVTTKKTP----PSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVF 56

Query: 235 YKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPA-VITTGETE 293
           Y+  + N                  L    +Y   + A  + G G  S    +     + 
Sbjct: 57  YRTSSQNNVQVLN---TNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSG 113

Query: 294 PGT 296
           P +
Sbjct: 114 PSS 116

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 53.2 bits (126), Expect = 3e-09
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 1/91 (1%)

Query: 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETP-NGQITGYKVYYTQDQSLPMSAWETQVVDNN 538
           +P   P  +++   S + +V+ W          ITGY  YY    S       T    + 
Sbjct: 5   DPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHA 64

Query: 539 QLTTISDLTPHTIYTIRVQAFTSVGPGPLSA 569
           +   I+ L   T+Y  ++Q+F++      SA
Sbjct: 65  RSFKIAPLETATMYEFKLQSFSAASASEFSA 95

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 51.2 bits (121), Expect = 1e-08
 Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 6/89 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETL------LYYVIQYKPKAANTPYSEISGIITTY 254
              P  ++I E + T+V L W+  S+         Y   +    A     + I G     
Sbjct: 7   MPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARS 66

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSS 283
           + +  L   T YEF + + +       S+
Sbjct: 67  FKIAPLETATMYEFKLQSFSAASASEFSA 95

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 46.2 bits (108), Expect = 6e-07
 Identities = 14/89 (15%), Positives = 31/89 (34%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
           P   P+ +  E  S T++ + W        +    YY      +   +   + +   +  
Sbjct: 6   PMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHAR 65

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSS 804
           SF +  L+  T Y   + + ++      S
Sbjct: 66  SFKIAPLETATMYEFKLQSFSAASASEFS 94

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (123), Expect = 8e-09
 Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 6/103 (5%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNL 260
           P  P  ++   +T     L W  P   +  Y IQ     A    +E  G    Y  + +L
Sbjct: 1   PDGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPLQAETPGSAVDY-PLHDL 59

Query: 261 SPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQV 303
             +T Y   +  +       P+S    T        APRD++ 
Sbjct: 60  VLHTNYTATVRGLRGPNLTSPASITFTT-----GLEAPRDLEA 97

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 3e-04
 Identities = 16/101 (15%), Positives = 27/101 (26%), Gaps = 8/101 (7%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P  +    L+     + W+PP        I                    T  +   + 
Sbjct: 3   GPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-------QAETPGSAVDYP 55

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEV 819
           L +L   T Y   V           +  IT  T  + P ++
Sbjct: 56  LHDLVLHTNYTATVRGLRGPNLTSPA-SITFTTGLEAPRDL 95

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 5e-04
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 10/108 (9%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
            P  ++   L+    V+ W  P+ P        +  T          + +   +     +
Sbjct: 3   GPTQLRALNLTEGFAVLHWKPPQNPVDTYD---IQVTAPG---APPLQAETPGSAVDYPL 56

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDI 591
            DL  HT YT  V+           A +   T       PRDL A ++
Sbjct: 57  HDLVLHTNYTATVRGLRGPNLTS-PASITFTT---GLEAPRDLEAKEV 100

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (121), Expect = 1e-08
 Identities = 15/93 (16%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P AP           S++++     +    + +Y+++Y+  ++           + +  +
Sbjct: 1   PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVML 60

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTG 290
           ++L    EYE Y++A N  G+   +     T  
Sbjct: 61  KSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAA 93

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (86), Expect = 5e-04
 Identities = 13/92 (14%), Positives = 28/92 (30%), Gaps = 3/92 (3%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           AP+         +++ +   + +     I  Y V Y    S            ++    +
Sbjct: 3   APKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDH--VML 60

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
             L  +  Y + V A    G    +   + +T
Sbjct: 61  KSLDWNAEYEVYVVAENQQGKSKAA-HFVFRT 91

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 13/93 (13%), Positives = 27/93 (29%), Gaps = 4/93 (4%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P+          SI+++        S       + + + +                  +
Sbjct: 3   APKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPS---GSDHVM 59

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           L  L    EY ++V+A    G   ++     RT
Sbjct: 60  LKSLDWNAEYEVYVVAENQQGKSKAA-HFVFRT 91

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (121), Expect = 1e-08
 Identities = 12/97 (12%), Positives = 30/97 (30%), Gaps = 9/97 (9%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPK---------AANTPYSEISGII 251
                 + +++VT +S+RL+W  P      +++++                    +    
Sbjct: 4   RPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGT 63

Query: 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288
                +R+L   T Y   +  +    +         T
Sbjct: 64  RHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTART 100

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 6/100 (6%)

Query: 717 GAPPQ--NVSCEPLSSTSIRISWEPPPVERSNGHIVYYKL---QFVETGRSDSEASIVTL 771
           G+ P+   +S   ++++S+R++WE PP    +  + +            R   +  ++  
Sbjct: 2   GSRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVP 61

Query: 772 KNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
             + S VL +L+  T Y + +          S    T RT
Sbjct: 62  GTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQ-GTART 100

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (80), Expect = 0.004
 Identities = 9/87 (10%), Positives = 29/87 (33%), Gaps = 4/87 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQ--ITGYKVYYTQDQSLPMSAWETQVVDNNQLT 541
               + V  +++S++ + W+ P        +       +  +  P    + +++      
Sbjct: 6   RLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRH 65

Query: 542 --TISDLTPHTIYTIRVQAFTSVGPGP 566
              + DL   T+Y++ +          
Sbjct: 66  SAVLRDLRSGTLYSLTLYGLRGPHKAD 92

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (121), Expect = 1e-08
 Identities = 15/102 (14%), Positives = 34/102 (33%), Gaps = 8/102 (7%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGIIT--T 253
            +AP+ +++  V      + W     +      L +  +          + +  +     
Sbjct: 3   LMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQE 62

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGR-GPPSSPAVITTGETEP 294
           +  +  L+P T+YEF +      G     S  +      T+P
Sbjct: 63  WICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (119), Expect = 3e-08
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSF 777
            P ++    + +    ISWE           + ++ + +  G +  EA ++TLK  Q   
Sbjct: 5   APISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWI 64

Query: 778 VLDELKKWTEYRIWVLAGTSIGDG----PSSYPITIRT 811
            L+ L   T+Y   V      G+     P S P+  RT
Sbjct: 65  CLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRT 102

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 6e-07
 Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 6/99 (6%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQ--ITGYKVYYTQDQSLPMSAWETQVVDNNQLT 541
           AP  +QV  + +    I W+  +  +       ++            A    +    +  
Sbjct: 5   APISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWI 64

Query: 542 TISDLTPHTIYTIRVQAFTSVG----PGPLSAPVLVKTQ 576
            +  LTP T Y  +V+     G      P S P+  +T+
Sbjct: 65  CLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTK 103

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 9/98 (9%)

Query: 624 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELY-----WNDTYAKAKHHRRIGLVETYS 678
           P  L+ V ++     ++W     S       E          T+ +A         E   
Sbjct: 6   PISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWIC 65

Query: 679 LTGLYPNTLYYIWLAAQSPRGEGAT----TPPIPVRTK 712
           L  L P+T Y   +  +  +GE  T    + P+  RTK
Sbjct: 66  LETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTK 103

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 2e-08
 Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 4/94 (4%)

Query: 481 PGTAPRDVQVRPLS-SSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQ 539
           P + P ++ +     +  + + W+        ITGY++  T       ++ E  V  +  
Sbjct: 1   PLSPPTNLHLEANPDTGVLTVSWERS--TTPDITGYRITTTPTNGQQGNSLEEVVHADQS 58

Query: 540 LTTISDLTPHTIYTIRVQAFTSVGPG-PLSAPVL 572
             T  +L+P   Y + V          P+S  ++
Sbjct: 59  SCTFDNLSPGLEYNVSVYTVKDDKESVPISDTII 92

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 1e-07
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 4/92 (4%)

Query: 201 PVAPLDVKISEVTATS-VRLDWTYP-SETLLYYVIQYKPKAAN--TPYSEISGIITTYYT 256
              P ++ +     T  + + W    +  +  Y I   P          E+     +  T
Sbjct: 2   LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCT 61

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288
             NLSP  EY   +  V +     P S  +I 
Sbjct: 62  FDNLSPGLEYNVSVYTVKDDKESVPISDTIIP 93

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 2e-07
 Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 4/88 (4%)

Query: 716 PGAPPQNVSCEPLSSTS-IRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
           P +PP N+  E    T  + +SWE        G+ +       + G        V   +Q
Sbjct: 1   PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGN---SLEEVVHADQ 57

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGP 802
           +S   D L    EY + V       +  
Sbjct: 58  SSCTFDNLSPGLEYNVSVYTVKDDKESV 85

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (80), Expect = 0.004
 Identities = 10/80 (12%), Positives = 22/80 (27%), Gaps = 2/80 (2%)

Query: 624 PRDLRAVDIQET-AVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI-GLVETYSLTG 681
           P +L      +T  +T++W + T              +          +     + +   
Sbjct: 5   PTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDN 64

Query: 682 LYPNTLYYIWLAAQSPRGEG 701
           L P   Y + +       E 
Sbjct: 65  LSPGLEYNVSVYTVKDDKES 84

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (119), Expect = 3e-08
 Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 9/102 (8%)

Query: 201 PVAPLDVKISEVTATSVRL-------DWTYPSETLLYYVIQYKPKAANTPYSEISGIITT 253
           P  P ++ ++ V      L            S   L + ++Y+ + + T  + +   +  
Sbjct: 2   PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQH 61

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPS--SPAVITTGETE 293
           +  + +      +   + A    G+G  S  SP  + T  TE
Sbjct: 62  HCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPWTE 103

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 2e-07
 Identities = 14/88 (15%), Positives = 37/88 (42%), Gaps = 3/88 (3%)

Query: 719 PPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTS 776
           PP N++   +  +   + ++W+ P    S+ + + ++L++     S +  + +    Q  
Sbjct: 4   PPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAER-SKTFTTWMVKDLQHH 62

Query: 777 FVLDELKKWTEYRIWVLAGTSIGDGPSS 804
            V+ +      + + + A    G G  S
Sbjct: 63  CVIHDAWSGLRHVVQLRAQEEFGQGEWS 90

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 3e-05
 Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 480 EPGTAPRDVQVRPL--SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDN 537
           +P   P ++ V  +  +   + + W +P + N      +           +     V D 
Sbjct: 1   QPD-PPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDL 59

Query: 538 NQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAP 570
                I D      + ++++A    G G  S  
Sbjct: 60  QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEW 92

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (117), Expect = 4e-08
 Identities = 18/89 (20%), Positives = 28/89 (31%), Gaps = 4/89 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT-- 541
           AP ++ V    S T+++ W  P  P+  +  +  Y     S    A              
Sbjct: 4   APGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSL 63

Query: 542 --TISDLTPHTIYTIRVQAFTSVGPGPLS 568
               S L     Y  RV+A+        S
Sbjct: 64  RIAASTLKSGISYRARVRAWAQAYNTTWS 92

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (104), Expect = 3e-06
 Identities = 14/97 (14%), Positives = 26/97 (26%), Gaps = 11/97 (11%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---------LLYYVIQYKPKAANTPYSEISGII 251
           P AP ++ +    + ++ L W+ P                +      A    Y+      
Sbjct: 2   PRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEP 61

Query: 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS--SPAV 286
           +       L     Y   + A         S  SP+ 
Sbjct: 62  SLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPST 98

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (89), Expect = 3e-04
 Identities = 14/89 (15%), Positives = 25/89 (28%), Gaps = 3/89 (3%)

Query: 719 PPQNVSCEPLSSTSIRISWEP---PPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
            P N++     S ++ ++W     P     N       +            ++  L+   
Sbjct: 4   APGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSL 63

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSS 804
                 LK    YR  V A     +   S
Sbjct: 64  RIAASTLKSGISYRARVRAWAQAYNTTWS 92

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (116), Expect = 6e-08
 Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET-----LLYYVIQYKPKAANTPYSEISGIITTYY 255
              P       +T  +V L W  P  T       Y V +          +  S I+   +
Sbjct: 3   IDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEF 62

Query: 256 TVRNLSPYTEYEFYIIAVNNLGR-GPPSSPAVITTGETE 293
           TV  L+    YEF +IA N  G   PPS P+   T   +
Sbjct: 63  TVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDD 101

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 4e-06
 Identities = 19/100 (19%), Positives = 31/100 (31%), Gaps = 4/100 (4%)

Query: 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL 540
           P   P       ++  T+ ++W +PE   G      +   +D                  
Sbjct: 2   PIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENE 61

Query: 541 TTISDLTPHTIYTIRVQAFTSVG----PGPLSAPVLVKTQ 576
            T+S LT    Y  RV A  + G    P   S  +  +  
Sbjct: 62  FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDD 101

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 9e-05
 Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 5/103 (4%)

Query: 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
           P  PP       ++  ++ + W  P        I  Y ++  +        +  +   + 
Sbjct: 2   PIDPPGKPVPLNITRHTVTLKWAKPE-YTGGFKITSYIVEKRDLPNGRWLKANFSNILEN 60

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDG----PSSYPITIRTHED 814
            F +  L +   Y   V+A  + G        S  IT R   +
Sbjct: 61  EFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVE 103

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 48.9 bits (115), Expect = 9e-08
 Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 1/94 (1%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           AP+   +    +    I W++       I  Y + +    +        + V N   + +
Sbjct: 8   APKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFV 66

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577
             ++P   YT RV AF  +G  P SA     T Q
Sbjct: 67  VQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQ 100

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 46.5 bits (109), Expect = 6e-07
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 7/95 (7%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGII--TTYY 255
           P AP    I+   A    + W    +    +L+Y IQ+        +      +  T   
Sbjct: 6   PNAPKLTGIT-CQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSS 64

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPSSPA-VITT 289
            V  +SP+  Y F +IA N +G  PPS+ +   TT
Sbjct: 65  FVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTT 99

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT-LKN 773
           VP   P+        +    I WE      +   I++Y +QF  +    S  +    + N
Sbjct: 5   VPN-APKLTGITC-QADKAEIHWEQQG--DNRSPILHYTIQFNTSFTPASWDAAYEKVPN 60

Query: 774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP-ITIRT 811
             S  + ++  W  Y   V+A   IG  P S    +  T
Sbjct: 61  TDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTT 99

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 48.9 bits (115), Expect = 1e-07
 Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 16/102 (15%)

Query: 204 PLDVKISEVTATSVRLDWT---YPSETLLYYVIQYKPKAANTPYSEI------------- 247
           P    ++ ++  SV L W         ++ + +QY+       +                
Sbjct: 3   PTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNS 62

Query: 248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
               +   +V +L P   Y F I+AV +      S+ +    
Sbjct: 63  ELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFY 104

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 44.3 bits (103), Expect = 4e-06
 Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 11/97 (11%)

Query: 485 PRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMS-----------AWETQ 533
           P    V  LS  +++++W  P      I  +KV Y                         
Sbjct: 3   PTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNS 62

Query: 534 VVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAP 570
            +  +   +++DL P   Y  R+ A  S      S  
Sbjct: 63  ELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNT 99

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 38.9 bits (89), Expect = 3e-04
 Identities = 19/96 (19%), Positives = 30/96 (31%), Gaps = 10/96 (10%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERS--NGHIVYYKLQF--------VETGRSDSEASI 768
           PP   +   LS  S+ + W  P  +        V Y++           +          
Sbjct: 2   PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWN 61

Query: 769 VTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSS 804
             L    +  + +LK    YR  +LA  S  D   S
Sbjct: 62  SELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKES 97

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (114), Expect = 1e-07
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 203 APLDVKISEVTATSVRLDWTY-PSETLLYYVIQYKPKAANTPYSEIS-GIITTYYTVRNL 260
              D+   ++T +S+ L WT   S T++ Y I         P  E        YYTV  L
Sbjct: 8   QLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGL 67

Query: 261 SPYTEYEFYIIAVNNLGRGPPSSPAVIT 288
            P  +Y+  +I + N G   P++    T
Sbjct: 68  EPGIDYDISVITLINGGESAPTTLTQQT 95

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 5/93 (5%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
              ++S   ++ +SI + W P       G+ +         G            +   + 
Sbjct: 8   QLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVV----AAGEGIPIFEDFVDSSVGYYT 63

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           +  L+   +Y I V+   + G+   +  +T +T
Sbjct: 64  VTGLEPGIDYDISVITLINGGESAPT-TLTQQT 95

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.9 bits (115), Expect = 2e-07
 Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 2/112 (1%)

Query: 474 VRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ 533
           +   +  P + P    V  ++  ++ + WD  +    Q    +      +          
Sbjct: 8   MEPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYG 67

Query: 534 VVDNNQLTT--ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583
           V+     T   +  L P T+Y  R++  +  G    S  V V T +      
Sbjct: 68  VIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESGPSS 119

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.3 bits (111), Expect = 4e-07
 Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 7/107 (6%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYPSET-------LLYYVIQYKPKAANTPYSEISGI 250
           +     P    + +VT  S+ L W    +                +       Y  I   
Sbjct: 13  VVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTG 72

Query: 251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTA 297
             T + V  L P T Y+F +   +  G    S    + T      ++
Sbjct: 73  YATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESGPSS 119

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.0 bits (110), Expect = 6e-07
 Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 1/109 (0%)

Query: 709 VRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHI-VYYKLQFVETGRSDSEAS 767
           +   + VP + P       ++  SI + W+    E+  G    + +    E         
Sbjct: 8   MEPHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYG 67

Query: 768 IVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816
           ++     T  V++ L+  T Y+  +   +  G+   S  +++ T  +  
Sbjct: 68  VIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESG 116

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.2 bits (95), Expect = 7e-05
 Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 8/106 (7%)

Query: 622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE-----T 676
           +KP       +   ++ L W             +        +       G++       
Sbjct: 17  SKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATR 76

Query: 677 YSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722
           + + GL P TLY   L   SP GE   +P + V T      + P +
Sbjct: 77  HVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATT---RESGPSS 119

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (111), Expect = 2e-07
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
             +  QV   S++   + W+ P +    +T Y++ +         + +           I
Sbjct: 3   QCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGV----EGSMQICYCGPGLSYEI 58

Query: 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKT 575
             L+P T Y  RVQA + VG GP S  V   T
Sbjct: 59  KGLSPATTYYCRVQALSVVGAGPFSEVVACVT 90

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (111), Expect = 2e-07
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 5/92 (5%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSET---LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           P      +++  +AT  +++W  P      +  Y +++                   Y +
Sbjct: 1   PDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGV--EGSMQICYCGPGLSYEI 58

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
           + LSP T Y   + A++ +G GP S      T
Sbjct: 59  KGLSPATTYYCRVQALSVVGAGPFSEVVACVT 90

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (101), Expect = 6e-06
 Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
             +       S+T  +++WE P    +   +  Y+L++     S     I       S+ 
Sbjct: 3   QCKPPQVTCRSATCAQVNWEVP--LSNGTDVTEYRLEWGGVEGSMQ---ICYCGPGLSYE 57

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
           +  L   T Y   V A + +G GP S  +   T
Sbjct: 58  IKGLSPATTYYCRVQALSVVGAGPFSEVVACVT 90

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (94), Expect = 4e-05
 Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 1/90 (1%)

Query: 623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGL 682
           + +  +      T   + W  P  +G ++  Y L W      +      G   +Y + GL
Sbjct: 3   QCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVE-GSMQICYCGPGLSYEIKGL 61

Query: 683 YPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712
            P T YY  + A S  G G  +  +   T 
Sbjct: 62  SPATTYYCRVQALSVVGAGPFSEVVACVTP 91

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} Length = 115

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (113), Expect = 2e-07
 Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 6/106 (5%)

Query: 484 APRDVQVRPL--SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT 541
            P ++ V      SS + + W  P   +  I  Y + Y    +   S    +   + + +
Sbjct: 7   PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSS 66

Query: 542 -TISDLTPHTIYTIRVQAFTSVGPGPLS---APVLVKTQQGVPSQP 583
            T+ DL P T Y  R++     G G  S         T +  PS+ 
Sbjct: 67  FTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKE 112

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} Length = 115

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (112), Expect = 3e-07
 Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 9/107 (8%)

Query: 201 PVAPLDVKISEVTATSVRLDW------TYPSETLLYYVIQYKPKAANTPYSEISGIITTY 254
           P   L V  SE  ++ ++L W      +                  +    E +    + 
Sbjct: 7   PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSS 66

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPS---SPAVITTGETEPGTAP 298
           +TV++L P+TEY F I  +   G+G  S     A   T E  P   P
Sbjct: 67  FTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKEP 113

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} Length = 115

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (103), Expect = 5e-06
 Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 5/105 (4%)

Query: 719 PPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTS 776
           PP N+S       S+ ++++W  P ++         + +  +           T   ++S
Sbjct: 7   PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSS 66

Query: 777 FVLDELKKWTEYRIWVLAGTSIGDGPSSY---PITIRTHEDDPSE 818
           F + +LK +TEY   +      G G  S      +  T+ED PS+
Sbjct: 67  FTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSK 111

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} Length = 115

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 1e-04
 Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 7/102 (6%)

Query: 627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE----TYSLTGL 682
           +   +   + + L W+ P+     I+ Y + +    A                ++++  L
Sbjct: 13  VINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDL 72

Query: 683 YPNTLYYIWLAAQSPRGEG---ATTPPIPVRTKQYVPGAPPQ 721
            P T Y   +      G+G     +      T +  P   P 
Sbjct: 73  KPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKEPS 114

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 2e-07
 Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 4/91 (4%)

Query: 203 APLDVKISEVTATSVRLDWT----YPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR 258
            P++V I+E  +             PS    Y +      +               YT++
Sbjct: 2   GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIK 61

Query: 259 NLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
            L P   YE  +I++   G    +     TT
Sbjct: 62  GLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 3e-05
 Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 1/86 (1%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           + P +V +    S                I+ Y + +    S+      T     N   T
Sbjct: 1   SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLNS-YT 59

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLS 568
           I  L P  +Y  ++ +    G   ++
Sbjct: 60  IKGLKPGVVYEGQLISIQQYGHQEVT 85

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 6/89 (6%)

Query: 718 APPQN--VSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775
           + P    ++  P    S  I W  P     + +I+ ++ +       +         +  
Sbjct: 1   SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE----ATIPGHLN 56

Query: 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSS 804
           S+ +  LK    Y   +++    G    +
Sbjct: 57  SYTIKGLKPGVVYEGQLISIQQYGHQEVT 85

>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR2a [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 2e-07
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 105 PQFSIPP---PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----G 156
           P ++        L  V   + +   C A G+PMP ++W K    E   + ++        
Sbjct: 2   PYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGK-EFKQEHRIGGYKVRNQ 60

Query: 157 RNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKV 190
              L ++ V  S+  NYTC+  +  G I  +  + V
Sbjct: 61  HWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 96

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (111), Expect = 3e-07
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 3/98 (3%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           T     +  P  +  + + W+  +         ++ +   +     A    +        
Sbjct: 8   TMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEALQYE 67

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLS---APVLVKTQQ 577
           +  L P T YT++++      PG  S     + ++T +
Sbjct: 68  LCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 105

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (95), Expect = 4e-05
 Identities = 15/99 (15%), Positives = 29/99 (29%), Gaps = 4/99 (4%)

Query: 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF 777
               +    P  +  +++SWEP      + +         + G +              +
Sbjct: 8   TMDPSPEAAPPQAGCLQLSWEPWQ-PGLHINQKCELRHKPQRGEASWALVGPLPLEALQY 66

Query: 778 VLDELKKWTEYRIWVLAGTSIGDGPSSY---PITIRTHE 813
            L  L   T Y + +        G  S     + +RT E
Sbjct: 67  ELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 105

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (91), Expect = 1e-04
 Identities = 16/101 (15%), Positives = 27/101 (26%), Gaps = 8/101 (7%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLL-----YYVIQYKPKAANTPYSEISGIITT 253
            L       + +   A  ++L W      L          + +   A+        +   
Sbjct: 5   MLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEAL 64

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPS---SPAVITTGE 291
            Y +  L P T Y   I  +     G  S       + T E
Sbjct: 65  QYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 105

>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 6e-07
 Identities = 17/96 (17%), Positives = 26/96 (27%), Gaps = 7/96 (7%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLD 163
            P+          V   S  +     VG P P  +W K        D            +
Sbjct: 4   APKI-FERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCE 62

Query: 164 RVTE------SENYTCIAASVLGVIETSTIVKVQCK 193
            V        S +    A ++ G   +   + VQ K
Sbjct: 63  LVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 98

>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 46.0 bits (108), Expect = 7e-07
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDR 164
           P + +      E  + S L  SCVA G P P V+W +     L   +++ V    L   +
Sbjct: 2   PDW-LDVITDTEADIGSDLRWSCVASGKPRPAVRWLR-DGQPLASQNRIEVSGGELRFSK 59

Query: 165 VTESE--NYTCIAASVLGVIETSTIVKVQ 191
           +   +   Y C+A +  G +  S  + VQ
Sbjct: 60  LVLEDSGMYQCVAENKHGTVYASAELTVQ 88

>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Perlecan Ig3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.4 bits (106), Expect = 1e-06
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRNVLTL 162
           P   ++       V   + +   C A   SP   + W +  N +L        G  +LT+
Sbjct: 1   PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNG--ILTI 58

Query: 163 DRVTES--ENYTCIAASVLGVIETSTIVKVQ 191
             V  S    Y C  +++  + + +  + VQ
Sbjct: 59  RNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 89

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 1e-06
 Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 4/95 (4%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
           +P   P+N+SC       +R  W+     R       + L+        ++         
Sbjct: 2   LPPEKPKNLSCIVNEGKKMRCEWDGG---RETHLETNFTLKSEWATHKFADCKAKRDTPT 58

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITI 809
           +  V      +    +WV A  ++G   S   I  
Sbjct: 59  SCTVDYSTVYFVNIEVWVEAENALGKVTSD-HINF 92

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 1e-06
 Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 3/89 (3%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLL---YYVIQYKPKAANTPYSEISGIITTYYTV 257
           P  P ++         +R +W    ET L   + +                   T+    
Sbjct: 4   PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVD 63

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAV 286
            +   +   E ++ A N LG+        
Sbjct: 64  YSTVYFVNIEVWVEAENALGKVTSDHINF 92

>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.3 bits (106), Expect = 1e-06
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 8/99 (8%)

Query: 103 VPPQFSIPPPAL-LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-----LPVG 156
           VPP        +     L   + L C A G P P + W K        ++          
Sbjct: 2   VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDD 61

Query: 157 RNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQCK 193
            + LT+  V +++   Y CIA +  G  + S  +KV  K
Sbjct: 62  SSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 100

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 1e-06
 Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 9/102 (8%)

Query: 485 PRDVQVRPLS------SSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNN 538
           P  +    L+       + + ++W+ P   + Q     + Y              +    
Sbjct: 4   PIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDPIL 63

Query: 539 QLT-TISDLTPHTIYTIRVQAFTSVG--PGPLSAPVLVKTQQ 577
             +  +  L     Y +RV++        G  S  + V   Q
Sbjct: 64  TTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLPQ 105

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 8/101 (7%)

Query: 719 PPQNVSCEPLS------STSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK 772
           PP  ++   L+         I++ WE P         +  + +      ++++  ++   
Sbjct: 3   PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDPI 62

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPS--SYPITIRT 811
             TS  +  LK   EY + V +           S  + +  
Sbjct: 63  LTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTL 103

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 11/99 (11%)

Query: 200 LPVAPLDVKISEVTATSVRLDWTYPSETL-------LYYVIQYKPKAANTPYSEISGIIT 252
           L    L+V ++      +++ W  P           L Y +QYK          +  I+T
Sbjct: 7   LNWTLLNVSLTG-IHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWK-MMDPILT 64

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGR--GPPSSPAVITT 289
           T   V +L    EYE  + +        G  S    +T 
Sbjct: 65  TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTL 103

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 2e-06
 Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 6/98 (6%)

Query: 484 APRDVQVRPL----SSSTMVIQWDEPETPNGQITGYKVYYTQD-QSLPMSAWETQVVDNN 538
            P ++ V           + I+W  P   + +   + + Y    +    + WE       
Sbjct: 5   PPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQQ 64

Query: 539 QLTTISDLTPHTIYTIRVQAFTSVGP-GPLSAPVLVKT 575
               I  L P   Y ++V+     G     S    ++ 
Sbjct: 65  TEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQI 102

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 4e-04
 Identities = 12/93 (12%), Positives = 25/93 (26%), Gaps = 7/93 (7%)

Query: 204 PLDVKISEVTATSVRLDWTYPSET------LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
            ++VK  E     + + W+ P+                        +        T + +
Sbjct: 10  AVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKI 69

Query: 258 RNLSPYTEYEFYIIAVNNLGR-GPPSSPAVITT 289
            +L P  +Y   +    + G     S    I  
Sbjct: 70  LSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQI 102

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 2e-06
 Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 713 QYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK 772
           + V    P  +       +   +    PP E      + Y++       + S   +  L+
Sbjct: 1   EVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVEILE 60

Query: 773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPS-----SYPITIRT 811
            +T  VL  L+  T Y   V A  +           S P+++ T
Sbjct: 61  GRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLT 104

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.002
 Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 8/99 (8%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNG--QITGYKVYYTQDQSLPMSAWETQVVDNNQLT 541
           AP  +  R    S  V+    P           Y+V  +             +    +  
Sbjct: 7   APVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVEILEGRTECV 66

Query: 542 TISDLTPHTIYTIRVQAFTSVGPG-----PLSAPVLVKT 575
            +S+L   T YT  V+A  +           S PV + T
Sbjct: 67  -LSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLT 104

>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} Length = 114

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 2e-06
 Identities = 14/114 (12%), Positives = 34/114 (29%), Gaps = 12/114 (10%)

Query: 713 QYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFV-----ETGRSDSEAS 767
           Q+V    P+++           ++W        +  +    L+F           +  A 
Sbjct: 2   QHVQPPEPRDLQIS-TDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAI 60

Query: 768 IVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSY------PITIRTHEDD 815
           +++  +Q +   + L   + Y   V    + G   S         +   +   D
Sbjct: 61  LLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD 114

>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR1 [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 3e-06
 Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 18/107 (16%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKG---QNIELTPDDKLPV--- 155
           R  P      PA    ++   +   C       P ++W K       +  PD    +   
Sbjct: 2   RHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVL 61

Query: 156 ----------GRNVLTLDRVTESE--NYTCIAASVLGVIETSTIVKV 190
                        VL +  VT  +   YTC+A + +G+   S  + V
Sbjct: 62  KAAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLTV 108

>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 44.1 bits (103), Expect = 4e-06
 Identities = 23/97 (23%), Positives = 32/97 (32%), Gaps = 6/97 (6%)

Query: 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD---KLPVGRNVLT 161
           P+F + P    EV      N  C  + S  P V W K             +       LT
Sbjct: 2   PRFIVKPYGT-EVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLT 60

Query: 162 LDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           ++RV   +   YT  A +  G  E    + V     P
Sbjct: 61  INRVKGDDKGEYTVRAKNSYGTKEEIVFLNVTRHSEP 97

>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 5e-06
 Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 8/98 (8%)

Query: 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVL 160
           PQ  I  P   +V     + L     G+      W K +  ++   + + V      + L
Sbjct: 1   PQI-IQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRK-QIQESEHMKVENSENGSKL 58

Query: 161 TLDRVTESE--NYTCIAASVLGVIETSTIVKVQCKYAP 196
           T+    +     YT +  + LG  +    + V  K  P
Sbjct: 59  TILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDP 96

>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

 Score = 43.7 bits (102), Expect = 6e-06
 Identities = 25/96 (26%), Positives = 34/96 (35%), Gaps = 7/96 (7%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GR 157
            V P F+     + EV+  S     C   G P P V W K  N               G 
Sbjct: 6   HVKPYFTKTILDM-EVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGN 64

Query: 158 NVLTLDRVTESE--NYTCIAASVLGVIETSTIVKVQ 191
             LT+  V   +   YTC A + LG    +  + V+
Sbjct: 65  CSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVE 100

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.4 bits (101), Expect = 8e-06
 Identities = 14/98 (14%), Positives = 24/98 (24%), Gaps = 7/98 (7%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWTYP-----SETLLYYVIQYKPKAANTPYSEISGIITT 253
            L    +   +       + L W         E       Q + K AN            
Sbjct: 6   MLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKD 65

Query: 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPS--SPAVITT 289
            + +  L     Y   +  + +   G  S  SP +   
Sbjct: 66  QFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLR 103

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 10/88 (11%), Positives = 23/88 (26%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
                  V       + + W   +         ++ Y              +  +     
Sbjct: 9   ALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFE 68

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAP 570
           +  L    +YT++++   S  PG  S  
Sbjct: 69  LCGLHQAPVYTLQMRCIRSSLPGFWSPW 96

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.4 bits (88), Expect = 5e-04
 Identities = 11/100 (11%), Positives = 24/100 (24%), Gaps = 5/100 (5%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
           +                 + +SW  P                 +   ++         ++
Sbjct: 7   LQALDIGPDVVSH-QPGCLWLSW-KPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSK 64

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGDGP---SSYPITIRT 811
             F L  L +   Y + +    S   G     S  + +R 
Sbjct: 65  DQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRP 104

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 2e-05
 Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 8/100 (8%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYP-----SETLLYYVIQYKPKAANTPYSEISGIITTYY 255
           P   +  +        + + W  P      E+                +  +     T +
Sbjct: 10  PPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNGTAH 69

Query: 256 TVRNLSPYTEYEFYIIAVNNLGRGPPS--SPAVITTGETE 293
           T+ +     EY   + A +N   G  S  S A   T  TE
Sbjct: 70  TITDAYAGKEYIIQVAAKDN-EIGTWSDWSVAAHATPWTE 108

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 4e-05
 Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 4/96 (4%)

Query: 484 APRDVQVRPL--SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT 541
            P +V  RP+  +   + + W  P T     +    ++ + + L +  W+   + N    
Sbjct: 10  PPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNGTAH 69

Query: 542 TISDLTPHTIYTIRVQAFTSVG--PGPLSAPVLVKT 575
           TI+D      Y I+V A  +        S       
Sbjct: 70  TITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 5/97 (5%)

Query: 719 PPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTS 776
           PP+NV   P+  +   + ++W+ P                        +   V L N T+
Sbjct: 10  PPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRP-LILDQWQHVELSNGTA 68

Query: 777 FVLDELKKWTEYRIWVLAGTSIGDGPS--SYPITIRT 811
             + +     EY I V A  +     S  S       
Sbjct: 69  HTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 2e-05
 Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 2/95 (2%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           +P   QV P SS+  V   +   T    I  YK  +         +      + +    +
Sbjct: 5   SPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIV 64

Query: 544 --SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
               L P T Y +R+ A    G G +SA    KTQ
Sbjct: 65  TIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 99

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (95), Expect = 3e-05
 Identities = 19/97 (19%), Positives = 37/97 (38%), Gaps = 9/97 (9%)

Query: 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKP--------KAANTPYSEISGIIT 252
           P +P  +   E  +++ ++ +  P  T    +++YK            +  Y      + 
Sbjct: 3   PSSP-SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASME 61

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289
              T+  L P T Y   + A+N  G G  S+ +   T
Sbjct: 62  GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 98

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 3e-04
 Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 6/100 (6%)

Query: 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA---SIVTL 771
            P   P     EP  S++ ++ ++ P        I+ YK ++   G     +        
Sbjct: 2   TPS-SPSIDQVEP-YSSTAQVQFDEPE-ATGGVPILKYKAEWRAVGEEVWHSKWYDAKEA 58

Query: 772 KNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRT 811
             +    +  LK  T Y + + A    G G  S     +T
Sbjct: 59  SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 98

>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 4e-05
 Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 5/88 (5%)

Query: 109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTES 168
           +  P  + V        SC   G P+P V W +   +  T            +   ++  
Sbjct: 3   LTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSV 62

Query: 169 E-----NYTCIAASVLGVIETSTIVKVQ 191
           +     NY+ +  +  G  E    + +Q
Sbjct: 63  QASDEGNYSVVVENSEGKQEAEFTLTIQ 90

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 7e-05
 Identities = 7/85 (8%), Positives = 15/85 (17%), Gaps = 6/85 (7%)

Query: 203 APLDVKISEVTATSVRLDWTYP-----SETLLYYVIQYKPKAANTPYSEISGIITTYYTV 257
            P +V I      +  + W Y          +         +                + 
Sbjct: 3   TPTNVTIESYN-MNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACINISHHYCNISD 61

Query: 258 RNLSPYTEYEFYIIAVNNLGRGPPS 282
               P       + A         +
Sbjct: 62  HVGDPSNSLWVRVKARVGQKESAYA 86

>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 40.3 bits (93), Expect = 7e-05
 Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 6/93 (6%)

Query: 101 RRVPPQFSIPPPALL--EVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRN 158
           R   P F   P   L  E   +  + L+C A  +P    +W+          D       
Sbjct: 1   RSYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVA 60

Query: 159 VLTL----DRVTESENYTCIAASVLGVIETSTI 187
              +     +  ++ +Y C+A +  G + +   
Sbjct: 61  GDLVISNPVKAKDAGSYQCVATNARGTVVSREA 93

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.3 bits (93), Expect = 9e-05
 Identities = 15/93 (16%), Positives = 24/93 (25%), Gaps = 11/93 (11%)

Query: 201 PVAPLDVK-ISEVTATSVRLDWTYPSETLL----------YYVIQYKPKAANTPYSEISG 249
           P +P ++  +  +T  S+   W    ET L                              
Sbjct: 5   PASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKR 64

Query: 250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS 282
                   +NL  Y     ++ A N LG     
Sbjct: 65  QNNCSIPRKNLLLYQYMAIWVQAENMLGSSESP 97

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 714 YVPGAPPQNVSC-EPLSSTSIRISWEPPPVERSNGHIVYY----KLQFVETGRSDSEASI 768
           Y P   P N+SC   L++ S+   WEP P        +      +      G +  +   
Sbjct: 3   YPPA-SPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVA 61

Query: 769 VTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITI 809
              +N  S     L  +    IWV A   +G   S   + +
Sbjct: 62  KKRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESP-KLCL 101

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (86), Expect = 0.001
 Identities = 9/92 (9%), Positives = 21/92 (22%), Gaps = 9/92 (9%)

Query: 623 KPRDLRAV-DIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE------ 675
            P +L  +  +   ++   W     +          +            I          
Sbjct: 7   SPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQN 66

Query: 676 --TYSLTGLYPNTLYYIWLAAQSPRGEGATTP 705
             +     L       IW+ A++  G   +  
Sbjct: 67  NCSIPRKNLLLYQYMAIWVQAENMLGSSESPK 98

>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.0 bits (92), Expect = 1e-04
 Identities = 19/94 (20%), Positives = 34/94 (36%), Gaps = 6/94 (6%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTL 162
           + P+  +     +++      NL    +G+P P   W  G +      + L   ++  T 
Sbjct: 1   LKPKI-LTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTS 59

Query: 163 -----DRVTESENYTCIAASVLGVIETSTIVKVQ 191
                 +  +S NY     + LG  E    V VQ
Sbjct: 60  IFFPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 1e-04
 Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 2/94 (2%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
           + PR +     +   +++ WD PE    ++    V   +  S      +  V        
Sbjct: 9   SPPRGLVAVR-TPRGVLLHWDPPELVPKRLD-GYVLEGRQGSQGWEVLDPAVAGTETELL 66

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ 576
           +  L    +Y  R+ AF        S    V T 
Sbjct: 67  VPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTS 100

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 6e-04
 Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 5/100 (5%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWT----YPSETLLYYVIQYKPKAANTPYSEISGIITTY 254
           +    P  +     T   V L W      P     Y +   +                T 
Sbjct: 6   SGLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETE 64

Query: 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP 294
             V  L     YEF ++A        PS+ A ++T     
Sbjct: 65  LLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSG 104

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.6 bits (91), Expect = 1e-04
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 205 LDVKISEVTATSVRLDWTYPSET-------LLYYVIQYKPKAANTPYSEISGIITTYYTV 257
           L+VK  +   T + + W+ P+ T        + Y I+ KP+ A       +G  T  + V
Sbjct: 11  LEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTGHQT-QFKV 69

Query: 258 RNLSPYTEYEFYIIAVNNLGR-GPPSSPAVITT 289
            +L P  +Y        + G     S  + +  
Sbjct: 70  FDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEM 102

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.1 bits (82), Expect = 0.002
 Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 5/98 (5%)

Query: 719 PPQNVSCEPL----SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQ 774
           PP+N++ E        T + + W PP +          + +         E  I    +Q
Sbjct: 5   PPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTGHQ 64

Query: 775 TSFVLDELKKWTEYRIWVLAGTSIGD-GPSSYPITIRT 811
           T F + +L    +Y +        G     S   ++  
Sbjct: 65  TQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEM 102

>d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 17/87 (19%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 484 APRDVQVRPLSSSTMV-IQWDEPETPNGQITGYKV-YYTQDQSLPMSAWETQVVDNNQLT 541
            P+++Q++PL +S  V + W+ P+T +   + + + +  Q Q       + +V  +    
Sbjct: 4   PPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTD---K 60

Query: 542 TISDLTPHTIYTIRVQAFTSVGPGPLS 568
           T + +      +I V+A         S
Sbjct: 61  TSATVICRKNASISVRAQDRYYSSSWS 87

>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 20/102 (19%), Positives = 32/102 (31%), Gaps = 14/102 (13%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDD---------- 151
           VPP             + +   L+C    GSP     W K   +  T             
Sbjct: 1   VPPSKPTVNIPS-SATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSY 59

Query: 152 --KLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQ 191
                 G  V      +++  Y+C A +  G   TS  V+++
Sbjct: 60  VLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRME 101

>d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor common gamma chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543
           AP ++ +  LS S + + W+           + V Y  D      +W  Q VD     ++
Sbjct: 5   APENLTLHKLSESQLELNWNNR--FLNHCLEHLVQYRTDW---DHSWTEQSVDYRHKFSL 59

Query: 544 SDLTPHTIYTIRVQAFTSVGPG 565
             +     YT RV++  +   G
Sbjct: 60  PSVDGQKRYTFRVRSRFNPLCG 81

>d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor common gamma chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 5e-04
 Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778
            P+N++   LS + + ++W    +     H+V Y+               V    +  F 
Sbjct: 5   APENLTLHKLSESQLELNWNNRFLNHCLEHLVQYR----TDWDHSWTEQSVD--YRHKFS 58

Query: 779 LDELKKWTEYRIWVLAGTSIGDGPSSY 805
           L  +     Y   V +  +   G + +
Sbjct: 59  LPSVDGQKRYTFRVRSRFNPLCGSAQH 85

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 1/84 (1%)

Query: 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTT 542
            AP  +QV     S   ++W+  +     I        +  +      +T+ + N     
Sbjct: 6   MAPPSLQVTKDGDS-YSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMA 64

Query: 543 ISDLTPHTIYTIRVQAFTSVGPGP 566
           +  L P T Y  RV+  TS     
Sbjct: 65  LPALEPSTRYWARVRVRTSRTGYN 88

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 5e-04
 Identities = 11/89 (12%), Positives = 25/89 (28%), Gaps = 6/89 (6%)

Query: 198 LTLPVAPLDVKISEVTATSVRLDWTYPSE-----TLLYYVIQYKPKAANTPYSEISGIIT 252
           + + +AP  +++++    S  L W             + +   K  A        +    
Sbjct: 2   VNIQMAPPSLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNA 60

Query: 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPP 281
               +  L P T Y   +    +      
Sbjct: 61  HSMALPALEPSTRYWARVRVRTSRTGYNG 89

>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Tyrosine-protein kinase receptor tyro3, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 4e-04
 Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 8/88 (9%)

Query: 112 PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIE-------LTPDDKLPVGRNVLTLDR 164
           P  L V    P+ L+C   G   P ++W K   +        +   ++  +G   L    
Sbjct: 3   PVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVE 62

Query: 165 VTESENYTCIAASVLGVIETSTI-VKVQ 191
            +++  Y C          +  + + V+
Sbjct: 63  RSDAGRYWCQVEDGGETEISQPVWLTVE 90

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (87), Expect = 6e-04
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 3/96 (3%)

Query: 199 TLPVAPLDVKISEVTATSVRLDWT--YPSETLLYYVIQYKPKAANTPYSEISGIITTYYT 256
            +P  P  + +     TS+ + WT       ++          +    +        YYT
Sbjct: 19  RVPEVPSSLHVR-PLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYT 77

Query: 257 VRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET 292
           + NL P + Y   + A NN+G G P   + +T   T
Sbjct: 78  IENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHT 113

>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]} Length = 110

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (86), Expect = 8e-04
 Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 17/105 (16%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPM---PFVKWRKGQNIELTPDDKLP------ 154
           P    +  P   EV +   +  S    G+ +   P VKW KG+ ++L+            
Sbjct: 3   PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDS 62

Query: 155 ------VGRNVLTLDRVTES--ENYTCIAASVLGVIETSTIVKVQ 191
                 V    L +     +    Y C  ++      ++  + V 
Sbjct: 63  YDRASKVYLFELHITDAQPAFTGGYRCEVSTKDKFDCSNFNLTVH 107

>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 17/105 (16%), Positives = 30/105 (28%), Gaps = 18/105 (17%)

Query: 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK---------------GQNIELTP 149
           P    P    +EV L S + L C   G       W+                  ++E   
Sbjct: 2   PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPA 61

Query: 150 DDKLPVGRNVLTLDRVTESE---NYTCIAASVLGVIETSTIVKVQ 191
           + +      VL +  +        +TC A +  G+      +   
Sbjct: 62  NKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 106

>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 11/92 (11%), Positives = 26/92 (28%), Gaps = 10/92 (10%)

Query: 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----GR 157
             PQ+ +     +         + C+   +PM +  + K         +           
Sbjct: 4   PVPQY-VSKD--MMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSG 60

Query: 158 NVLTLDRVTESEN--YTCIAASVLGVIETSTI 187
             L        +   YTC   + +G  +  ++
Sbjct: 61  KRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSL 92

>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1, ICAM-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Intercellular adhesion molecule-1, ICAM-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (81), Expect = 0.003
 Identities = 18/89 (20%), Positives = 25/89 (28%), Gaps = 9/89 (10%)

Query: 104 PPQF-SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTL 162
            P+      P       +S     C A G+P+P +K  K            P+       
Sbjct: 2   GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTF--------PLPIGESVT 53

Query: 163 DRVTESENYTCIAASVLGVIETSTIVKVQ 191
                   Y C A S  G +     V V 
Sbjct: 54  VTRDLEGTYLCRARSTQGEVTREVTVNVL 82

>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (83), Expect = 0.003
 Identities = 20/128 (15%), Positives = 42/128 (32%), Gaps = 38/128 (29%)

Query: 101 RRVPPQFSIPP----PALLEVMLDSPLNLSCVAVGSPMP--------------------- 135
           R+ PP+  +      P  + V+  + L L     G P P                     
Sbjct: 1   RQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPD 60

Query: 136 -------FVKWRKGQNIELTPDDKLPV----GRNVLTLDRVTESE--NYTCIAASVLGVI 182
                    +W   + +    + ++ V     R++ T++   + +   YT    + +G  
Sbjct: 61  APEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGED 120

Query: 183 ETSTIVKV 190
           + +  VKV
Sbjct: 121 QVNLTVKV 128

>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Receptor-type tyrosine-protein phosphatase mu
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (81), Expect = 0.003
 Identities = 15/97 (15%), Positives = 27/97 (27%), Gaps = 13/97 (13%)

Query: 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP------VGR 157
            P F       +EV         C A+G  +   +             K           
Sbjct: 2   TPHFLRIQN--VEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFI 59

Query: 158 NVLTLDRVTE--SENYTCIAASVLGVIETST---IVK 189
               +   T+  +  Y C+  +  GV  ++    +VK
Sbjct: 60  ASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVK 96

>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3 {Human (Homo sapiens) [TaxId: 9606]} Length = 115

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Kin of IRRE-like protein 3, KIRREL3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (81), Expect = 0.004
 Identities = 15/103 (14%), Positives = 26/103 (25%), Gaps = 15/103 (14%)

Query: 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV------ 155
             PP  S         +      + C    +P P       +   L              
Sbjct: 5   NGPPIISSTQT--QHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETIS 62

Query: 156 ----GRNVLTLDRVTESEN---YTCIAASVLGVIETSTIVKVQ 191
                 + LT+  +  ++    Y C A +  G       +K Q
Sbjct: 63  TEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQ 105

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	904
d1cs6a4	89	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	99.6
d2cqva1	101	Telokin {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1wfoa1	117	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.56
d1x5ha1	119	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.55
d1wj3a_	117	Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI	99.52
d1biha4	89	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	99.52
d1koaa1	97	Twitchin {Nematode (Caenorhabditis elegans) [TaxId	99.51
d1wiua_	93	Twitchin {Nematode (Caenorhabditis elegans) [TaxId	99.49
d1fhga_	102	Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103	99.49
d1wfoa1	117	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1g1ca_	98	Titin {Human (Homo sapiens), different modules [Ta	99.48
d1va9a1	109	Down syndrome cell adhesion molecule-like protein	99.46
d1cfba2	105	Neuroglian, two amino proximal Fn3 repeats {Drosop	99.45
d1x5za1	102	Receptor-type tyrosine-protein phosphatase delta,	99.45
d1x5ga1	103	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.45
d2dtge2	196	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.45
d1x5ka1	111	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.44
d1x5ka1	111	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.43
d1cs6a3	91	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	99.43
d1wfna1	106	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.42
d1x5ga1	103	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.42
d1tnna_	91	Titin {Human (Homo sapiens), different modules [Ta	99.41
d2djsa1	95	Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta	99.41
d1x5ha1	119	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.4
d1x5za1	102	Receptor-type tyrosine-protein phosphatase delta,	99.4
d1rhfa2	85	Tyrosine-protein kinase receptor tyro3, second dom	99.4
d1x4xa1	93	Fibronectin type-III domain containing protein 3a,	99.4
d1x4ya1	101	Brother of CDO precursor (BOC) {Mouse (Mus musculu	99.39
d1uena_	125	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	99.39
d1x3da1	105	Fibronectin type-III domain containing protein 3a,	99.39
d1uema_	117	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	99.39
d2djsa1	95	Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta	99.38
d1x5la1	98	Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta	99.38
d2dtge2	196	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.38
d1x5la1	98	Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta	99.38
d1x5fa1	107	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.38
d1vcaa2	90	Vascular cell adhesion molecule-1 (VCAM-1) {Human	99.37
d1x5aa1	94	Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta	99.37
d2ibga1	95	Hedgehog receptor iHog {Fruit fly (Drosophila mela	99.36
d2crza1	97	Fibronectin type-III domain containing protein 3a,	99.36
d1x3da1	105	Fibronectin type-III domain containing protein 3a,	99.36
d3dara1	97	Fibroblast growth factor receptor, FGFR {Human (Ho	99.36
d1x4xa1	93	Fibronectin type-III domain containing protein 3a,	99.36
d1uema_	117	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	99.35
d1x5ya1	98	Myosin binding protein C, fast-type {Mouse (Mus mu	99.35
d1va9a1	109	Down syndrome cell adhesion molecule-like protein	99.35
d1x5ya1	98	Myosin binding protein C, fast-type {Mouse (Mus mu	99.35
d2crma1	107	Fibronectin type-III domain containing protein 3a,	99.35
d1qz1a3	100	Neural cell adhesion molecule (NCAM) {Rat (Rattus	99.34
d1qg3a1	92	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	99.33
d1wfna1	106	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.33
d1x5aa1	94	Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta	99.33
d2haza1	101	Neural cell adhesion molecule 1, NCAM {Human (Homo	99.33
d1x4za1	108	Brother of CDO precursor (BOC) {Mouse (Mus musculu	99.33
d1wj3a_	117	Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI	99.33
d2vkwa2	93	Neural cell adhesion molecule 1, NCAM {Human (Homo	99.32
d2crma1	107	Fibronectin type-III domain containing protein 3a,	99.32
d1wf5a1	108	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.32
d1gl4b_	89	Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId:	99.32
d1wfua_	120	Fibronectin type 3 and ankyrin repeat domains 1 pr	99.31
d1x4za1	108	Brother of CDO precursor (BOC) {Mouse (Mus musculu	99.31
d2vkwa2	93	Neural cell adhesion molecule 1, NCAM {Human (Homo	99.3
d2ibga1	95	Hedgehog receptor iHog {Fruit fly (Drosophila mela	99.3
d2crza1	97	Fibronectin type-III domain containing protein 3a,	99.3
d1gsma1	90	Mucosal addressin cell adhesion molecule-1 (MADCAM	99.3
d1x5xa1	96	Fibronectin type-III domain containing protein 3a,	99.29
d1wwca_	105	NT3 binding domain of trkC receptor {Human (Homo s	99.29
d2cuha1	102	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.29
d1epfa2	92	Neural cell adhesion molecule (NCAM) {Rat (Rattus	99.29
d1cfba2	105	Neuroglian, two amino proximal Fn3 repeats {Drosop	99.29
d1wf5a1	108	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.28
d1ueya_	127	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	99.28
d1ueya_	127	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	99.28
d2ifga1	92	High affinity nerve growth factor receptor TrkA, d	99.28
d1cfba1	100	Neuroglian, two amino proximal Fn3 repeats {Drosop	99.28
d1cfba1	100	Neuroglian, two amino proximal Fn3 repeats {Drosop	99.28
d1x5xa1	96	Fibronectin type-III domain containing protein 3a,	99.27
d1qg3a1	92	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	99.27
d1uena_	125	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	99.27
d2nxyb2	84	CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9	99.27
d1x5fa1	107	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.27
d2fdbp2	109	Fibroblast growth factor receptor, FGFR {Human (Ho	99.26
d1wisa1	111	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.26
d1x4ya1	101	Brother of CDO precursor (BOC) {Mouse (Mus musculu	99.26
d1wfua_	120	Fibronectin type 3 and ankyrin repeat domains 1 pr	99.25
d1biha1	94	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	99.25
d2dava1	113	Myosin-binding protein C, slow-type {Human (Homo s	99.24
d2cspa1	117	Rim binding protein 2 {Human (Homo sapiens) [TaxId	99.24
d2cuha1	102	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.24
d1cs6a1	97	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	99.24
d2avga1	110	Cardiac myosin binding protein C, different domain	99.23
d1k85a_	88	Fibronectin type III domain from chitinase A1. {Ba	99.23
d2haza1	101	Neural cell adhesion molecule 1, NCAM {Human (Homo	99.22
d1rhfa1	91	Tyrosine-protein kinase receptor tyro3, N-terminal	99.22
d3b5ha1	101	Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 960	99.21
d1wwbx_	103	Ligand binding domain of trkB receptor {Human (Hom	99.21
d2b5ib2	104	Interleukin-2 receptor beta chain {Human (Homo sap	99.21
d1wisa1	111	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.21
d2dtge1	102	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.21
d2fnba_	95	Fibronectin, different Fn3 modules {Human (Homo sa	99.2
d1wk0a_	137	Fibronectin type-III domain containing protein 3a,	99.2
d1k85a_	88	Fibronectin type III domain from chitinase A1. {Ba	99.2
d2c9aa1	96	Receptor-type tyrosine-protein phosphatase mu {Hum	99.2
d2dn7a1	94	Receptor-type tyrosine-protein phosphatase F, PTPR	99.2
d1biha3	97	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	99.2
d1x5ja1	100	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.2
d1fnfa1	94	Fibronectin, different Fn3 modules {Human (Homo sa	99.19
d1bpva_	104	Type I titin module {Human (Homo sapiens) [TaxId:	99.19
d2fnba_	95	Fibronectin, different Fn3 modules {Human (Homo sa	99.19
d1qr4a1	87	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	99.18
d1x5ia1	113	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.18
d1wfta_	123	Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T	99.18
d1tdqa2	92	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.18
d2dtge1	102	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.18
d1v5ja_	108	KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}	99.17
d1v5ja_	108	KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}	99.17
d1x5ja1	100	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.17
d2oz4a3	84	Intercellular adhesion molecule-1, ICAM-1 {Human (	99.17
d1bpva_	104	Type I titin module {Human (Homo sapiens) [TaxId:	99.17
d2d9qb2	105	Granulocyte colony-stimulating factor (GC-SF) rece	99.17
d2dn7a1	94	Receptor-type tyrosine-protein phosphatase F, PTPR	99.16
d1fnfa3	89	Fibronectin, different Fn3 modules {Human (Homo sa	99.16
d1ujta_	120	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	99.15
d1fnha1	90	Fibronectin, different Fn3 modules {Human (Homo sa	99.15
d1tena_	90	Tenascin {Human (Homo sapiens) [TaxId: 9606]}	99.15
d2d9qb2	105	Granulocyte colony-stimulating factor (GC-SF) rece	99.15
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	99.15
d2ic2a1	107	Hedgehog receptor iHog {Fruit fly (Drosophila mela	99.15
d1epfa1	97	Neural cell adhesion molecule (NCAM) {Rat (Rattus	99.15
d1f6fb2	103	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	99.14
d2ic2a1	107	Hedgehog receptor iHog {Fruit fly (Drosophila mela	99.14
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	99.14
d1gxea_	130	Cardiac myosin binding protein C, different domain	99.14
d1owwa_	93	Fibronectin, different Fn3 modules {Human (Homo sa	99.14
d1n26a1	93	Interleukin-6 receptor alpha chain, N-terminal dom	99.14
d1qr4a2	88	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	99.14
d2cuma1	93	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.13
d1tdqa3	86	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.13
d1wfta_	123	Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T	99.13
d1fnfa2	91	Fibronectin, different Fn3 modules {Human (Homo sa	99.13
d2cspa1	117	Rim binding protein 2 {Human (Homo sapiens) [TaxId	99.13
d1fnfa1	94	Fibronectin, different Fn3 modules {Human (Homo sa	99.13
d1f6fb2	103	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	99.13
d1n26a3	104	Interleukin-6 receptor alpha chain, domains 2 and	99.13
d1wk0a_	137	Fibronectin type-III domain containing protein 3a,	99.13
d1tdqa1	93	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.12
d1owwa_	93	Fibronectin, different Fn3 modules {Human (Homo sa	99.12
d1x5ia1	113	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.12
d1tena_	90	Tenascin {Human (Homo sapiens) [TaxId: 9606]}	99.11
d1qr4a2	88	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	99.11
d1iray3	107	Type-1 interleukin-1 receptor {Human (Homo sapiens	99.11
d3d48r2	104	Prolactin receptor {Human (Homo sapiens) [TaxId: 9	99.11
d1fnha1	90	Fibronectin, different Fn3 modules {Human (Homo sa	99.11
d1fnha2	90	Fibronectin, different Fn3 modules {Human (Homo sa	99.11
d1fnaa_	91	Fibronectin, different Fn3 modules {Human (Homo sa	99.11
d1fnha2	90	Fibronectin, different Fn3 modules {Human (Homo sa	99.11
d1tdqa2	92	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.1
d1fnfa3	89	Fibronectin, different Fn3 modules {Human (Homo sa	99.1
d1cd9b2	106	Granulocyte colony-stimulating factor (GC-SF) rece	99.1
d1f97a1	102	Junction adhesion molecule, JAM, N-terminal domain	99.1
d1cd9b2	106	Granulocyte colony-stimulating factor (GC-SF) rece	99.1
d2aw2a1	104	B- and T-lymphocyte attenuator CD272 {Human (Homo	99.09
d1fnfa2	91	Fibronectin, different Fn3 modules {Human (Homo sa	99.09
d1bqua2	115	Cytokine receptor gp130 cytokine-binding domains {	99.09
d2b5ib2	104	Interleukin-2 receptor beta chain {Human (Homo sap	99.07
d1nbqa1	105	Junction adhesion molecule, JAM, N-terminal domain	99.07
d1nbqa2	104	Junction adhesion molecule, JAM, C-terminal domain	99.07
d1fnha3	89	Fibronectin, different Fn3 modules {Human (Homo sa	99.07
d1l6za2	96	Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-t	99.07
d1bqua2	115	Cytokine receptor gp130 cytokine-binding domains {	99.06
d3d48r2	104	Prolactin receptor {Human (Homo sapiens) [TaxId: 9	99.06
d1tdqa3	86	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.05
d1n26a3	104	Interleukin-6 receptor alpha chain, domains 2 and	99.05
d1ujta_	120	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	99.05
d1qr4a1	87	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	99.05
d1fnaa_	91	Fibronectin, different Fn3 modules {Human (Homo sa	99.05
d2gysa2	114	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	99.04
d1cs6a2	105	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	99.04
d2b5ic1	95	Cytokine receptor common gamma chain {Human (Homo	99.04
d1olza1	92	Semaphorin 4d Ig-like domain {Human (Homo sapiens)	99.04
d1axib2	106	Growth hormone receptor {Human (Homo sapiens) [Tax	99.03
d1tdqa1	93	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.03
d1j8ka_	94	Fibronectin, different Fn3 modules {Human (Homo sa	99.03
d1j8ka_	94	Fibronectin, different Fn3 modules {Human (Homo sa	99.03
d1fnha3	89	Fibronectin, different Fn3 modules {Human (Homo sa	99.02
d1axib2	106	Growth hormone receptor {Human (Homo sapiens) [Tax	99.02
d1iarb2	101	Interleukin-4 receptor alpha chain {Human (Homo sa	99.02
d2cuma1	93	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.02
d1iarb2	101	Interleukin-4 receptor alpha chain {Human (Homo sa	99.02
d2cuia1	101	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.01
d1he7a_	107	High affinity nerve growth factor receptor TrkA, d	99.01
d2b5ic1	95	Cytokine receptor common gamma chain {Human (Homo	99.0
d1f97a2	110	Junction adhesion molecule, JAM, C-terminal domain	99.0
d1erna2	105	Erythropoietin (EPO) receptor {Human (Homo sapiens	99.0
d1x44a1	90	Myosin-binding protein C, slow-type {Human (Homo s	98.98
d1pd6a_	94	Cardiac myosin binding protein C, different domain	98.96
d2cuia1	101	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	98.96
d2dtge3	125	Insulin receptor {Human (Homo sapiens) [TaxId: 960	98.95
d2gysa2	114	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	98.95
d1bqua1	95	Cytokine receptor gp130 cytokine-binding domains {	98.94
d1iama1	103	Intercellular cell adhesion molecule-1 (ICAM-1) {H	98.93
d1iray2	103	Type-1 interleukin-1 receptor {Human (Homo sapiens	98.93
d1iray1	101	Type-1 interleukin-1 receptor {Human (Homo sapiens	98.92
d1tiua_	89	Twitchin {Human (Homo sapiens), Ig repeat 27 [TaxI	98.91
d2fcba2	88	Fc gamma receptor ectodomain (CD32) {Human (Homo s	98.91
d2crya1	115	Kin of IRRE-like protein 3, KIRREL3 {Human (Homo s	98.9
d1fnla2	89	Fc gamma receptor ectodomain (CD32) {Human (Homo s	98.9
d1bqua1	95	Cytokine receptor gp130 cytokine-binding domains {	98.87
d2dtge3	125	Insulin receptor {Human (Homo sapiens) [TaxId: 960	98.86
d1erna2	105	Erythropoietin (EPO) receptor {Human (Homo sapiens	98.84
d1f2qa2	89	IgE high affinity receptor alpha subunit {Human (H	98.83
d1cd9b1	107	Granulocyte colony-stimulating factor (GC-SF) rece	98.82
d1uc6a_	109	Ciliary neurotrophic factor receptor alpha {Human	98.81
d2gysa4	100	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	98.79
d1uc6a_	109	Ciliary neurotrophic factor receptor alpha {Human	98.78
d1biha2	111	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	98.75
d1fnla1	84	Fc gamma receptor ectodomain (CD32) {Human (Homo s	98.74
d2fcba1	85	Fc gamma receptor ectodomain (CD32) {Human (Homo s	98.72
d2gysa4	100	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	98.69
d1cd9b1	107	Granulocyte colony-stimulating factor (GC-SF) rece	98.68
d1f2qa1	82	IgE high affinity receptor alpha subunit {Human (H	98.65
d3d85d3	94	The p40 domain of interleukin-12 (IL-12 beta chain	98.63
d1fyhb1	98	Interferon-gamma receptor alpha chain {Human (Homo	98.62
d1zxqa1	106	Intercellular cell adhesion molecule-2 (ICAM-2) {H	98.61
d1fyhb1	98	Interferon-gamma receptor alpha chain {Human (Homo	98.58
d3d85d3	94	The p40 domain of interleukin-12 (IL-12 beta chain	98.45
d1y6kr1	99	Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa	98.38
d1ccza1	93	CD2-binding domain of CD58, N-terminal domain {Hum	98.3
d1y6kr1	99	Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa	98.26
d1pkoa_	126	Myelin oligodendrocyte glycoprotein (MOG) {Rat (Ra	98.25
d1hnga1	98	CD2, first domain {Rat (Rattus norvegicus) [TaxId:	98.23
d1l6za1	107	Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), N-t	97.95
d1eaja_	124	Coxsackie virus and adenovirus receptor (Car), dom	97.72
d1nezg_	122	CD8 {Mouse (Mus musculus) [TaxId: 10090]}	97.62
d2cdea1	114	T-cell antigen receptor {Human (Homo sapiens), bet	97.48
d2nxyb1	97	CD4 V-set domains {Human (Homo sapiens) [TaxId: 96	97.45
d1a0ql1	106	Immunoglobulin light chain kappa variable domain,	97.45
d1lp9e1	115	T-cell antigen receptor {Mouse (Mus musculus), alp	97.42
d1ucta1	99	Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sa	97.36
d1xeda_	116	Polymeric-immunoglobulin receptor, PIGR {Human (Ho	97.35
d1neua_	119	Myelin membrane adhesion molecule P0 {Rat (Rattus	97.3
d1c5cl1	107	Immunoglobulin light chain kappa variable domain,	97.3
d1i8ka_	106	Immunoglobulin light chain kappa variable domain,	97.29
d1ospl1	107	Immunoglobulin light chain kappa variable domain,	97.24
d2bnqd1	113	T-cell antigen receptor {Human (Homo sapiens), alp	97.24
d1kcvl1	107	Immunoglobulin light chain kappa variable domain,	97.24
d1dr9a2	95	CD80, second domain {Human (Homo sapiens) [TaxId:	97.23
d1sq2n_	112	Novel antigen receptor (against lysozyme) {Nurse s	97.22
d1tvda_	116	T-cell antigen receptor {Human (Homo sapiens), del	97.21
d1j1pl_	107	Immunoglobulin light chain kappa variable domain,	97.2
d1tjgl1	107	Immunoglobulin light chain kappa variable domain,	97.19
d1mexl1	107	Immunoglobulin light chain kappa variable domain,	97.19
d1ucta2	96	Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sa	97.18
d1vesa_	113	Novel antigen receptor 12Y-2 {Spotted wobbegong (O	97.13
d1i9ea_	115	T-cell antigen receptor {Mouse (Mus musculus), alp	97.11
d1olla1	95	Ligand binding domain of NK receptor NKp46 {Human	97.11
d3bp5a1	114	Programmed cell death protein 1, PD1, extracellula	97.09
d1op3k1	106	Immunoglobulin light chain kappa variable domain,	97.05
d1lk3l1	106	Immunoglobulin light chain kappa variable domain,	97.03
d1muja1	100	Class II MHC alpha chain, C-terminal domain {Mouse	97.02
d1j8hd1	115	T-cell antigen receptor {Human (Homo sapiens), alp	97.01
d2esvd1	110	T-cell antigen receptor {Human (Homo sapiens), alp	97.0
d1ncna_	110	CD86 (b7-2), N-terminal domain {Human (Homo sapien	96.98
d2ak4d1	114	T-cell antigen receptor {Human (Homo sapiens), alp	96.93
d2ij0c1	118	T-cell antigen receptor {Human (Homo sapiens), bet	96.92
d1akjd_	114	CD8 {Human (Homo sapiens) [TaxId: 9606]}	96.91
d1jhll_	108	Immunoglobulin light chain kappa variable domain,	96.89
d1mqkl_	109	Immunoglobulin light chain kappa variable domain,	96.88
d1fo0a_	115	T-cell antigen receptor {Mouse (Mus musculus), alp	96.84
d2atpb1	115	CD8 {Mouse (Mus musculus), beta-chain [TaxId: 1009	96.84
d1hkfa_	108	NK cell activating receptor NKP44 {Human (Homo sap	96.83
d1vcaa1	109	Vascular cell adhesion molecule-1 (VCAM-1) {Human	96.82
d8faba1	103	Immunoglobulin light chain lambda variable domain,	96.8
d2rhea_	114	Immunoglobulin light chain lambda variable domain,	96.78
d1dr9a1	105	CD80, N-terminal domain {Human (Homo sapiens) [Tax	96.78
d1d5il1	107	Immunoglobulin light chain kappa variable domain,	96.77
d1u3ha1	110	T-cell antigen receptor {Mouse (Mus musculus), alp	96.76
d1bwwa_	109	Immunoglobulin light chain kappa variable domain,	96.76
d3cx5k1	107	Immunoglobulin light chain kappa variable domain,	96.74
d1lk2b_	99	beta2-microglobulin {Mouse (Mus musculus) [TaxId:	96.7
d1bd2d1	111	T-cell antigen receptor {Human (Homo sapiens), alp	96.66
d1k5nb_	100	beta2-microglobulin {Human (Homo sapiens) [TaxId:	96.66
d2fx7l1	108	Immunoglobulin light chain kappa variable domain,	96.65
d1q9ra1	113	Immunoglobulin light chain kappa variable domain,	96.62
d1ogad1	115	T-cell antigen receptor {Human (Homo sapiens), alp	96.6
d2gsia1	111	Immunoglobulin light chain kappa variable domain,	96.59
d1yqvl1	104	Immunoglobulin light chain kappa variable domain,	96.59
d1olla2	93	Ligand binding domain of NK receptor NKp46 {Human	96.58
d2qfra1	112	Purple acid phosphatase, N-terminal domain {Kidney	96.56
d1ac6a_	110	T-cell antigen receptor {Mouse (Mus musculus), alp	96.55
d1mjul1	112	Immunoglobulin light chain kappa variable domain,	96.52
d1qfoa_	118	N-terminal domain of sialoadhesin {Mouse (Mus musc	96.52
d1ncwl1	112	Immunoglobulin light chain kappa variable domain,	96.51
d1de4a1	94	Hemochromatosis protein Hfe, alpha-3 domain {Human	96.5
d2g5ra1	121	N-terminal domain of sialic acid binding Ig-like l	96.48
d1lgva1	112	Immunoglobulin light chain lambda variable domain,	96.46
d2cqva1	101	Telokin {Human (Homo sapiens) [TaxId: 9606]}	96.46
d1hxmb1	123	T-cell antigen receptor {Human (Homo sapiens), del	96.45
d2qfra1	112	Purple acid phosphatase, N-terminal domain {Kidney	96.44
d1fnga1	101	Class II MHC alpha chain, C-terminal domain {Mouse	96.41
d1hxma1	120	T-cell antigen receptor {Human (Homo sapiens), gam	96.34
d1cd0a_	111	Immunoglobulin light chain lambda variable domain,	96.32
d1rzfl1	111	Immunoglobulin light chain lambda variable domain,	96.3
d1xzwa1	119	Purple acid phosphatase, N-terminal domain {Sweet	96.3
d1w72l1	109	Immunoglobulin light chain lambda variable domain,	96.29
d1hdmb1	98	Class II MHC beta chain, C-terminal domain {Human	96.28
d1uvqa1	99	Class II MHC alpha chain, C-terminal domain {Human	96.26
d1d5mb1	98	Class II MHC beta chain, C-terminal domain {Human	96.25
d1kgcd1	112	T-cell antigen receptor {Human (Homo sapiens), alp	96.24
d2aq2a1	110	T-cell antigen receptor {Mouse (Mus musculus), bet	96.24
d2gj6d1	94	T-cell antigen receptor {Mouse (Mus musculus), bet	96.21
d1n4xl_	113	Immunoglobulin light chain kappa variable domain,	96.21
d2esve1	111	T-cell antigen receptor {Human (Homo sapiens), bet	96.18
d1oaql_	110	Immunoglobulin light chain lambda variable domain,	96.17
d1f3rb2	119	Immunoglobulin light chain kappa variable domain,	96.17
d1nfde1	108	Immunoglobulin light chain lambda variable domain,	96.17
d3b5ha2	80	Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 960	96.17
d1h5ba_	113	T-cell antigen receptor {Mouse (Mus musculus), alp	96.16
d1j05a_	111	Immunoglobulin light chain kappa variable domain,	96.14
d1t7va1	94	Zinc-alpha-2-glycoprotein, ZAG, alpha-3 domain {Hu	95.99
d1nkra2	99	Killer cell inhibitory receptor {Human (Homo sapie	95.99
d1ypzf1	120	T-cell antigen receptor {Human (Homo sapiens), gam	95.89
d1kgce1	112	T-cell antigen receptor {Human (Homo sapiens), bet	95.85
d2ntsp1	113	T-cell antigen receptor {Human (Homo sapiens), bet	95.85
d1hnfa1	101	CD2, first domain {Human (Homo sapiens) [TaxId: 96	95.82
d1smoa_	113	TREM-1 (triggering receptor expressed on myeloid c	95.8
d1ogae1	114	T-cell antigen receptor {Human (Homo sapiens), bet	95.79
d1uvqb1	97	Class II MHC beta chain, C-terminal domain {Human	95.78
d1nfdb1	113	T-cell antigen receptor {Mouse (Mus musculus), bet	95.7
d1xzwa1	119	Purple acid phosphatase, N-terminal domain {Sweet	95.68
d3frua1	91	Fc (IgG) receptor, alpha-3 domain {Rat (Rattus nor	95.68
d1rzfl2	102	Immunoglobulin light chain lambda constant domain,	95.59
d1fo0b_	112	T-cell antigen receptor {Mouse (Mus musculus), bet	95.57
d1ugna1	96	Ligand binding domain of lir-1 (ilt2) {Human (Homo	95.5
d1fp5a2	105	Immunoglobulin heavy chain epsilon constant domain	95.47
d1f6fb1	96	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	95.46
d1dqta_	117	Immunoreceptor CTLA-4 (CD152), N-terminal fragment	95.36
d1q0xl2	102	Immunoglobulin light chain lambda constant domain,	95.35
d1ymmd1	96	T-cell antigen receptor {Human (Homo sapiens), alp	95.25
d1j8he1	113	T-cell antigen receptor {Human (Homo sapiens), bet	95.25
d2bnub1	112	T-cell antigen receptor {Human (Homo sapiens), bet	95.25
d1hdma1	103	Class II MHC alpha chain, C-terminal domain {Human	95.12
d1i8lc_	118	Immunoreceptor CTLA-4 (CD152), N-terminal fragment	95.08
d1ugna2	98	Ligand binding domain of lir-1 (ilt2) {Human (Homo	95.05
d1hxmb2	107	T-cell antigen receptor {Human (Homo sapiens), del	95.01
d2cdeb1	112	T-cell antigen receptor {Human (Homo sapiens), bet	94.94
d2hyma1	109	Interferon-alpha/beta receptor beta chain {Human (	94.78
d1ow0a2	108	Immunoglobulin heavy chain alpha constant domain 3	94.75
d1u9ka_	110	TREM-1 (triggering receptor expressed on myeloid c	94.71
d2c4fu1	116	Extracellular region of human tissue factor {Human	94.7
d1nkra1	96	Killer cell inhibitory receptor {Human (Homo sapie	94.61
d2agjh1	120	Immunoglobulin heavy chain variable domain, VH {En	94.55
d7fabh1	116	Immunoglobulin heavy chain variable domain, VH {Hu	94.55
d1o0va1	104	Immunoglobulin heavy chain epsilon constant domain	94.55
d1xiwa_	91	CD3 epsilon chain ectodomain fragment {Human (Homo	94.54
d1xaua_	104	B and T lymphocyte attenuator, Btla {Mouse (Mus mu	94.53
d2mhaa1	89	Class I MHC, alpha-3 domain {Mouse (Mus musculus)	94.52
d1nfde2	104	Immunoglobulin light chain lambda constant domain,	94.45
d2h26a1	96	CD1, alpha-3 domain {Human (Homo sapiens), CD1a [T	94.4
d2hyma1	109	Interferon-alpha/beta receptor beta chain {Human (	94.27
d1hyrc1	94	Class I MHC homolog, alpha-3 domain {Human (Homo s	94.22
d1fltx_	95	Second domain of the Flt-1 receptor {Human (Homo s	94.22
d1f6fb1	96	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	94.19
d1dn0b1	120	Immunoglobulin heavy chain variable domain, VH {Hu	94.11
d2hfta1	106	Extracellular region of human tissue factor {Human	93.98
d1kxvc_	119	Camelid IG heavy chain variable domain, VHh {Camel	93.94
d1mjul2	107	Immunoglobulin light chain kappa constant domain,	93.93
d3d85d1	87	The p40 domain of interleukin-12 (IL-12 beta chain	93.9
d1mqkh_	123	Immunoglobulin heavy chain variable domain, VH {Mo	93.83
d1yjdc1	118	CD28 {Human (Homo sapiens) [TaxId: 9606]}	93.79
d1tnna_	91	Titin {Human (Homo sapiens), different modules [Ta	93.74
d1mjuh2	102	Immunoglobulin heavy chain gamma constant domain 1	93.73
d1wiua_	93	Twitchin {Nematode (Caenorhabditis elegans) [TaxId	93.66
d1iqdb1	117	Immunoglobulin heavy chain variable domain, VH {Hu	93.64
d1c5db1	117	Immunoglobulin heavy chain variable domain, VH {Ra	93.6
d2c4fu1	116	Extracellular region of human tissue factor {Human	93.58
d1c5cl2	107	Immunoglobulin light chain kappa constant domain,	93.55
d2hfta1	106	Extracellular region of human tissue factor {Human	93.51
d1cqka_	101	Immunoglobulin heavy chain gamma constant domain 3	93.46
d1jpth1	117	Immunoglobulin heavy chain variable domain, VH {En	93.45
d1vgeh1	122	Immunoglobulin heavy chain variable domain, VH {Hu	93.4
d1f3dh1	115	Immunoglobulin heavy chain variable domain, VH {Mo	93.4
d1koaa1	97	Twitchin {Nematode (Caenorhabditis elegans) [TaxId	93.34
d1nlbh1	118	Immunoglobulin heavy chain variable domain, VH {Mo	93.33
d1qnzh_	119	Immunoglobulin heavy chain variable domain, VH {Mo	93.31
d1jnhb1	117	Immunoglobulin heavy chain variable domain, VH {Mo	93.3
d2fbjh1	118	Immunoglobulin heavy chain variable domain, VH {Mo	93.19
d1k5na1	95	Class I MHC, alpha-3 domain {Human (Homo sapiens)	93.12
d2ck0h1	109	Immunoglobulin heavy chain variable domain, VH {Mo	93.06
d1mjuh1	116	Immunoglobulin heavy chain variable domain, VH {Mo	93.03
d1l6xa2	102	Immunoglobulin heavy chain gamma constant domain 3	93.01
d1ct8b1	118	Immunoglobulin heavy chain variable domain, VH {Mo	92.98
d1igtb4	102	Immunoglobulin heavy chain gamma constant domain 3	92.97
d1jbja2	100	CD3 epsilon chain ectodomain fragment {Mouse (Mus	92.96
d1um5h1	117	Immunoglobulin heavy chain variable domain, VH {Mo	92.94
d1ai1h1	120	Immunoglobulin heavy chain variable domain, VH {Mo	92.92
d1fhga_	102	Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103	92.91
d1a21a1	103	Extracellular region of human tissue factor {Rabbi	92.9
d1oari_	103	Immunoglobulin heavy chain variable domain, VH {Ra	92.87
d2p49b1	121	Camelid IG heavy chain variable domain, VHh {Camel	92.86
d1a2yb_	116	Immunoglobulin heavy chain variable domain, VH {Mo	92.85
d1u58a1	98	Immunomodulatory protein m144, alpha-3 domain {Mur	92.84
d1pg7x1	120	Immunoglobulin heavy chain variable domain, VH {Mo	92.82
d1kcvh2	101	Immunoglobulin heavy chain gamma constant domain 1	92.79
d1i1ca2	102	Immunoglobulin heavy chain gamma constant domain 3	92.77
d1rz7h1	119	Immunoglobulin heavy chain variable domain, VH {Hu	92.76
d1j05b_	121	Immunoglobulin heavy chain variable domain, VH {Mo	92.7
d1indh1	114	Immunoglobulin heavy chain variable domain, VH {Mo	92.63
d2jelh1	118	Immunoglobulin heavy chain variable domain, VH {Mo	92.62
d1zvya1	124	Camelid IG heavy chain variable domain, VHh {Camel	92.58
d1i3ua_	127	Camelid IG heavy chain variable domain, VHh {Llama	92.56
d1etzb1	126	Immunoglobulin heavy chain variable domain, VH {Mo	92.52
d1ncwh1	119	Immunoglobulin heavy chain variable domain, VH {Mo	92.46
d1mfah1	117	Immunoglobulin heavy chain variable domain, VH {Mo	92.45
d1eapb1	119	Immunoglobulin heavy chain variable domain, VH {Mo	92.44
d1hxma2	86	T-cell antigen receptor {Human (Homo sapiens), gam	92.38
d1r0ah1	123	Immunoglobulin heavy chain variable domain, VH {Mo	92.35
d1dlfh_	120	Immunoglobulin heavy chain variable domain, VH {Mo	92.18
d1a21a1	103	Extracellular region of human tissue factor {Rabbi	92.16
d1lmka1	126	Immunoglobulin heavy chain variable domain, VH {Mo	92.04
d1n0xh1	127	Immunoglobulin heavy chain variable domain, VH {Hu	92.02
d1sjva_	107	Camelid IG heavy chain variable domain, VHh {Llama	92.02
d1rhhb1	130	Immunoglobulin heavy chain variable domain, VH {Hu	92.01
d1bz7b1	122	Immunoglobulin heavy chain variable domain, VH {Mo	91.92
d2fx7h1	127	Immunoglobulin heavy chain variable domain, VH {Hu	91.85
d1rhfa1	91	Tyrosine-protein kinase receptor tyro3, N-terminal	91.82
d1ieha_	135	Camelid IG heavy chain variable domain, VHh {Llama	91.82
d1vcaa2	90	Vascular cell adhesion molecule-1 (VCAM-1) {Human	91.72
d1cs6a3	91	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	91.71
d1ol0a_	121	Immunoglobulin heavy chain variable domain, VH {En	91.71
d2nxyd1	128	Immunoglobulin heavy chain variable domain, VH {Hu	91.7
d2dava1	113	Myosin-binding protein C, slow-type {Human (Homo s	91.68
d1g1ca_	98	Titin {Human (Homo sapiens), different modules [Ta	91.68
d1f97a2	110	Junction adhesion molecule, JAM, C-terminal domain	91.65
d1rihh1	125	Immunoglobulin heavy chain variable domain, VH {Mo	91.58
d1dn0b2	105	Immunoglobulin heavy chain mu constant domain 1, C	91.56
d1dfbh1	126	Immunoglobulin heavy chain variable domain, VH {Hu	91.54
d1ow0a1	101	Immunoglobulin heavy chain alpha constant domain 2	91.52
d1ad9b1	120	Immunoglobulin heavy chain variable domain, VH {En	91.44
d1rzfh1	133	Immunoglobulin heavy chain variable domain, VH {Hu	91.37
d1yedb1	124	Immunoglobulin heavy chain variable domain, VH {Mo	91.35
d1rzga1	130	Immunoglobulin heavy chain variable domain, VH {Hu	91.34
d1rjca1	126	Camelid IG heavy chain variable domain, VHh {Camel	91.31
d1ogae2	127	T-cell antigen receptor {Human (Homo sapiens), bet	91.3
d1gsma1	90	Mucosal addressin cell adhesion molecule-1 (MADCAM	91.13
d1tjgh1	132	Immunoglobulin heavy chain variable domain, VH {En	91.13
d3cx5j1	127	Immunoglobulin heavy chain variable domain, VH {Mo	91.12
d2fb4h1	127	Immunoglobulin heavy chain variable domain, VH {Hu	91.08
d1lo4h1	118	Immunoglobulin heavy chain variable domain, VH {Mo	91.03
d1qz1a3	100	Neural cell adhesion molecule (NCAM) {Rat (Rattus	90.99
d1op3h1	125	Immunoglobulin heavy chain variable domain, VH {En	90.99
d2b1hh1	124	Immunoglobulin heavy chain variable domain, VH {En	90.93
d1fp5a1	103	Immunoglobulin heavy chain epsilon constant domain	90.76
d1q9rb1	122	Immunoglobulin heavy chain variable domain, VH {Mo	90.76
d1biha3	97	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	90.72
d1gl4b_	89	Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId:	90.52
d1i1ca1	103	Immunoglobulin heavy chain gamma constant domain 2	90.49
d1fn4b1	116	Immunoglobulin heavy chain variable domain, VH {Ra	90.48
d1jbja1	86	CD3 gamma chain ectodomain fragment {Mouse (Mus mu	90.22
d2nxyb2	84	CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9	89.95
d1nbqa1	105	Junction adhesion molecule, JAM, N-terminal domain	89.86
d2fdbp2	109	Fibroblast growth factor receptor, FGFR {Human (Ho	89.84
d1wwbx_	103	Ligand binding domain of trkB receptor {Human (Hom	89.75
d1pfca_	111	Immunoglobulin heavy chain gamma constant domain 3	89.25
d1rhfa2	85	Tyrosine-protein kinase receptor tyro3, second dom	89.24
d3dara1	97	Fibroblast growth factor receptor, FGFR {Human (Ho	88.78
d1cs6a4	89	Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}	88.63
d1nfdf1	121	Immunoglobulin heavy chain variable domain, VH {Ha	88.57
d1f97a1	102	Junction adhesion molecule, JAM, N-terminal domain	88.36
d3c2ah1	131	Immunoglobulin heavy chain variable domain, VH {Hu	88.32
d1sy6a1	81	CD3 gamma chain ectodomain fragment {Human (Homo s	88.29
d1epfa1	97	Neural cell adhesion molecule (NCAM) {Rat (Rattus	88.24
d1l6xa1	105	Immunoglobulin heavy chain gamma constant domain 2	88.22
d1igtb3	119	Immunoglobulin heavy chain gamma constant domain 2	88.14
d1biha1	94	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	88.14
d1c5ch2	103	Immunoglobulin heavy chain gamma constant domain 1	88.12
d1b2wh1	117	Immunoglobulin heavy chain variable domain, VH {En	87.81
d2c9aa1	96	Receptor-type tyrosine-protein phosphatase mu {Hum	87.68
d1biha4	89	Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}	87.5
d1xiwb_	74	CD3 delta chain ectodomain fragment {Human (Homo s	87.42
d1wwca_	105	NT3 binding domain of trkC receptor {Human (Homo s	87.31
d1l6za2	96	Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-t	87.16
d3b5ha1	101	Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 960	87.07
d1he7a_	107	High affinity nerve growth factor receptor TrkA, d	85.81
d2fbjh2	102	Immunoglobulin heavy chain alpha constant domain 1	85.24
d2aw2a1	104	B- and T-lymphocyte attenuator CD272 {Human (Homo	84.37
d1gxea_	130	Cardiac myosin binding protein C, different domain	84.15
d1i1ra1	100	Cytokine receptor gp130 cytokine-binding domains {	84.03
d2avga1	110	Cardiac myosin binding protein C, different domain	83.85
d1olla1	95	Ligand binding domain of NK receptor NKp46 {Human	83.66
d2fcba2	88	Fc gamma receptor ectodomain (CD32) {Human (Homo s	83.09
d1fnla2	89	Fc gamma receptor ectodomain (CD32) {Human (Homo s	82.85
d2ifga1	92	High affinity nerve growth factor receptor TrkA, d	82.78
d1olza1	92	Semaphorin 4d Ig-like domain {Human (Homo sapiens)	81.3
d1ucta2	96	Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sa	81.21
d1f2qa2	89	IgE high affinity receptor alpha subunit {Human (H	80.26
d1iray3	107	Type-1 interleukin-1 receptor {Human (Homo sapiens	80.26
d1n26a1	93	Interleukin-6 receptor alpha chain, N-terminal dom	80.12
d1x44a1	90	Myosin-binding protein C, slow-type {Human (Homo s	80.08

>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.60  E-value=2e-15  Score=120.72  Aligned_cols=85  Identities=28%  Similarity=0.507  Sum_probs=79.9

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcce
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVI  182 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~  182 (904)
                      |.|+..|.+ +.+..|+++.|.|.+.|.|.|.|+|+|+ +..+..+.++.+.++.|.|.++  +|+|.|+|.|.|..|..
T Consensus         2 P~f~~~~~~-~~v~~G~~~~l~C~~~g~P~p~v~W~k~-g~~i~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~~   79 (89)
T d1cs6a4           2 PDWLDVITD-TEADIGSDLRWSCVASGKPRPAVRWLRD-GQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTV   79 (89)
T ss_dssp             EEEEECCCC-EEEETTCCEEEECEEEEESCCEEEEEET-TEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             CCeEEECCC-EEECCCCcEEEEEEEEEEcCCEEEEEEe-eccccccceeeeeeeeEEEEeecccCCEEEEEEEEeCCCEE
Confidence            789999999 9999999999999999999999999999 8888888888888899999999  69999999999999999


Q ss_pred             EEEEEEEEE
Q psy8771         183 ETSTIVKVQ  191 (904)
Q Consensus       183 ~~~~~l~v~  191 (904)
                      .+++.|.|+
T Consensus        80 ~~~~~l~V~   88 (89)
T d1cs6a4          80 YASAELTVQ   88 (89)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEEE
Confidence            999999886

>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.1e-14  Score=119.88  Aligned_cols=92  Identities=20%  Similarity=0.243  Sum_probs=81.0

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEec
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      |+|+..|.+ +.+.+|+++.|+|.+.|.|.|.|.|+|+ +..+....++.+    +...|.|.++  +|+|.|+|.|.|.
T Consensus         1 P~~~~~p~~-~~v~~G~~~~l~C~v~g~p~p~v~W~k~-~~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~   78 (101)
T d2cqva1           1 PQIIQFPED-QKVRAGESVELFGKVTGTQPITCTWMKF-RKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK   78 (101)
T ss_dssp             CEESCCCCS-EEEETTCCEEEEEEEESSSSCEEEEEES-SSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred             CeEEeeCCc-EEEeCCCcEEEEEEEEecCCCEEEEEeC-ceeeccCCcEEEEEecceeEEEEeeCCcccCEEEEEEEEEC
Confidence            678888888 9999999999999999999999999999 777877777654    3447999998  6999999999999


Q ss_pred             CcceEEEEEEEEEeecCCCCCCCCCCc
Q psy8771         179 LGVIETSTIVKVQCKYAPLLTLPVAPL  205 (904)
Q Consensus       179 ~g~~~~~~~l~v~~~~~~~~~~P~~p~  205 (904)
                      .|..+.++.|.|.       ..|++|.
T Consensus        79 ~G~~~~~~~l~V~-------~~P~pP~   98 (101)
T d2cqva1          79 LGSRQAQVNLTVV-------DKPDPPA   98 (101)
T ss_dssp             SCEEECCEEEEEE-------CSCSCCC
T ss_pred             CCEEEEEEEEEEE-------ecCCCcC
Confidence            9999999999999       7787774

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=7.1e-15  Score=125.39  Aligned_cols=113  Identities=28%  Similarity=0.513  Sum_probs=95.8

Q ss_pred             CCCCCCC-CCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-Ccc
Q psy8771         698 RGEGATT-PPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQT  775 (904)
Q Consensus       698 ~G~~~~s-~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~  775 (904)
                      .|.|.++ ..+.++|.+++|. +|.++.+...+.++|.|+|++|.  ..+|.+.+|.|+|+..+............ ..+
T Consensus         2 ~G~G~pss~~v~~~T~~~~P~-~P~~~~~~~~~~~sv~v~W~~P~--~~~g~i~~Y~i~y~~~~~~~~~~~~~~~~~~~~   78 (117)
T d1wfoa1           2 IGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPPA--APNGIILAYQITHRLNTTTANTATVEVLAPSAR   78 (117)
T ss_dssp             CCCCCCCCCCSCCCCSCCCCC-CCCCCEEEEECSSEEEEECCCCS--CCCSCCCEEEEEEEESSCCCSCCCEEEECTTCC
T ss_pred             ccCCCCCCCCEEEECCCCCCc-CCCCcEEEEecCCEEEEEEECCC--CCCCceEEEeeeeeeccCCCceEeEEecCCceE
Confidence            5777665 4688889999887 78999999999999999999884  56889999999999887655544444455 888


Q ss_pred             eEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       776 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      .++|.+|+|++.|.|+|+|+|..|.|++|+.+.++|..
T Consensus        79 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT~e  116 (117)
T d1wfoa1          79 QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEK  116 (117)
T ss_dssp             EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSS
T ss_pred             EEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEECCC
Confidence            99999999999999999999999999999988888754

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=3.6e-15  Score=127.69  Aligned_cols=110  Identities=35%  Similarity=0.510  Sum_probs=92.6

Q ss_pred             eeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCC
Q psy8771         707 IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKW  785 (904)
Q Consensus       707 ~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~  785 (904)
                      +.++|.+++|..+|.++.+...+.+++.|+|++|.....||.+.+|.|+|+..+..... ....+. ..+.+.|.+|+++
T Consensus         2 v~v~T~~~~P~~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~   80 (119)
T d1x5ha1           2 VAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDV-TETLVSGTQLSQLIEGLDRG   80 (119)
T ss_dssp             CCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEE-ECCBCCTTCCEEEEECCCSS
T ss_pred             EEEEcCCCCCCCCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccccce-eeeecCCCccEEEeCCCCCC
Confidence            45788899998889999999999999999999987777889999999999887643221 112233 7789999999999


Q ss_pred             ceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771         786 TEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       786 t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~  817 (904)
                      +.|.|+|+|.|..|.|++|..+.++|.+..|.
T Consensus        81 t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~~~~  112 (119)
T d1x5ha1          81 TEYNFRVAALTINGTGPATDWLSAETFESDLD  112 (119)
T ss_dssp             CEEEEECEEEETTEEEEECCCEEEECCSSCCC
T ss_pred             CEEEEEEEEEcCCcCCCCCCCEEEEeCCCCCC
Confidence            99999999999999999999999999766553

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.4e-14  Score=120.17  Aligned_cols=114  Identities=27%  Similarity=0.373  Sum_probs=92.4

Q ss_pred             CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEE
Q psy8771         699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV  778 (904)
Q Consensus       699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~  778 (904)
                      |.|.+|..+.++|.+.+|..||.++ +...+.++|.|+|+++..++.||.+.+|.|+|+..+....    ........+.
T Consensus         1 G~s~~S~~v~v~T~~~~P~~pp~~~-~~~~~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~----~~~~~~~~~~   75 (117)
T d1wj3a_           1 GSSGSSGTVNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNV----QVLNTNKTSA   75 (117)
T ss_dssp             CCCCCCCCCCCCCSCCCCCCCCCSC-BCCEETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSC----EEEEESSSEE
T ss_pred             CcCCCCCCEEEEcCCCCcCCCCcce-EEeecCCEEEEEEeecccccCCCceeEEEEEEEecCCCce----eeeeceeeEE
Confidence            6788899999999999999877766 4456789999999997767888999999999998765432    2222445677


Q ss_pred             ecCCCCCceEEEEEEEeeCCCCCCCCCcEEe-ecCCCCCC
Q psy8771         779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITI-RTHEDDPS  817 (904)
Q Consensus       779 i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~-~t~~~~P~  817 (904)
                      +.+|.+++.|.|+|+|.|..|.|++|+++.+ ++.++.|+
T Consensus        76 ~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~~~~~~Ps  115 (117)
T d1wj3a_          76 ELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGPS  115 (117)
T ss_dssp             EEECCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCCCSC
T ss_pred             EeeccCCcEEEEEEEEEcCCccCCCCCCEEEeccCCCCCC
Confidence            7899999999999999999999999998876 55555553

>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=99.52  E-value=1.5e-14  Score=115.59  Aligned_cols=85  Identities=24%  Similarity=0.423  Sum_probs=74.4

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      +|.|...|.+.+.+.+|+++.|.|.+.|.|.|.|+|+|+ +..+.. .++.+.++.|.|.++  +|+|.|+|.|.|..|.
T Consensus         2 aP~f~~~p~~~~~v~~G~~~~l~C~~~g~P~p~v~W~~~-~~~i~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~   79 (89)
T d1biha4           2 APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHN-AKPLSG-GRATVTDSGLVIKGVKNGDKGYYGCRATNEHGD   79 (89)
T ss_dssp             EEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEET-TEECCS-SSEEEETTEEEESSCCSTTCEEEEEEEEETTEE
T ss_pred             CCeEEECCCCCEEEeCCCeEEEEEEEEEeCCCEEEEEeC-CccCcc-ccEEEeeeeEEECCCChhhCEEEEEEEEECCCE
Confidence            588888887657889999999999999999999999999 777754 466667778999999  6999999999999999


Q ss_pred             eEEEEEEEE
Q psy8771         182 IETSTIVKV  190 (904)
Q Consensus       182 ~~~~~~l~v  190 (904)
                      .+..+.|.|
T Consensus        80 ~~~~~~l~V   88 (89)
T d1biha4          80 KYFETLVQV   88 (89)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEEE
Confidence            988888876

>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.51  E-value=2.9e-14  Score=116.50  Aligned_cols=85  Identities=29%  Similarity=0.441  Sum_probs=75.9

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEec
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      |+|+..|.+ +.+.+|+++.|.|.+.|.|.|.|+|+|+ +..+..+.++.+    +...|.|.++  +|+|.|+|.|.|.
T Consensus         2 P~f~~~p~~-~~v~~G~~~~l~C~~~g~P~p~v~W~~~-~~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~   79 (97)
T d1koaa1           2 PRFIVKPYG-TEVGEGQSANFYCRVIASSPPVVTWHKD-DRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNS   79 (97)
T ss_dssp             CEEEECCCC-CEEETTSCEEEEEEEECSSCCEEEEEET-TEECCSBTTBBCCCSTTEEEEEESCCCSGGGSCEEEEEEET
T ss_pred             CEEEEeCCC-EEEeCCCcEEEEEEEEEcCCCEEEEEEe-eeccceeeEEEEEecCCeeEEEeCCCceecCEEEEEEEEEC
Confidence            889999998 9999999999999999999999999999 777777666553    3447999999  6999999999999


Q ss_pred             CcceEEEEEEEEE
Q psy8771         179 LGVIETSTIVKVQ  191 (904)
Q Consensus       179 ~g~~~~~~~l~v~  191 (904)
                      .|..+..+.|.|.
T Consensus        80 ~G~~~~~~~l~V~   92 (97)
T d1koaa1          80 YGTKEEIVFLNVT   92 (97)
T ss_dssp             TEEEEEEECCEEE
T ss_pred             CCEEEEEEEEEEe
Confidence            9999999999998

>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.49  E-value=4.2e-14  Score=114.46  Aligned_cols=87  Identities=22%  Similarity=0.291  Sum_probs=75.1

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      .+|.|..++.+ +.+.+|+++.|.|.+.|.|.|.|.|+|+ +..+..+.++..    +...|.|.++  +|+|.|+|.|.
T Consensus         1 l~P~i~~~~~~-~~v~~G~~~~l~c~~~g~P~p~v~W~~~-~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a~   78 (93)
T d1wiua_           1 LKPKILTASRK-IKIKAGFTHNLEVDFIGAPDPTATWTVG-DSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVK   78 (93)
T ss_dssp             CCCEECCCCCE-EEECSSBCCEEEEEEECCSSCEEEEECS-SSSCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred             CCCeEEeCCCc-EEEeCCCeEEEEEEEEEecCCeEEEEee-eeeceeeeeeeecccccceeeccccccccccEEEEEEEE
Confidence            36899988888 9999999999999999999999999999 666666555443    3457999998  69999999999


Q ss_pred             ecCcceEEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKVQ  191 (904)
Q Consensus       177 n~~g~~~~~~~l~v~  191 (904)
                      |..|..++.+.|.|+
T Consensus        79 N~~G~~~~~~~l~V~   93 (93)
T d1wiua_          79 NELGEDEAIFEVIVQ   93 (93)
T ss_dssp             ETTEEEEEEEEEEEC
T ss_pred             ECCCEEEEEEEEEEC
Confidence            999999998888874

>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

Probab=99.49  E-value=8.3e-14  Score=114.95  Aligned_cols=88  Identities=27%  Similarity=0.463  Sum_probs=78.1

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----cceEEEEeee--cCCeEEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      ..+|.|...|.+ +.+.+|+++.|.|.+.|.|.|.|.|+|+ +..+..+.++.+     +..+|.|.++  +|+|.|+|.
T Consensus         6 ~~~P~f~~~~~~-~~v~~G~~~~l~C~~~g~P~p~v~W~k~-~~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~   83 (102)
T d1fhga_           6 HVKPYFTKTILD-MEVVEGSAARFDCKVEGYPDPEVMWFKD-DNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCK   83 (102)
T ss_dssp             CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEE
T ss_pred             CCCCeEEcCCCc-EEEecCCcEEEEEEEEeccCCeEEEEee-eccccceeeEeEEEecCceeeeEecCCCHHhCEEEEEE
Confidence            457899999998 9999999999999999999999999999 778877766653     2457999999  699999999


Q ss_pred             EEecCcceEEEEEEEEE
Q psy8771         175 AASVLGVIETSTIVKVQ  191 (904)
Q Consensus       175 a~n~~g~~~~~~~l~v~  191 (904)
                      |.|..|..++++.|.|+
T Consensus        84 a~N~~G~~~~~~~L~V~  100 (102)
T d1fhga_          84 AVNSLGEATCTAELLVE  100 (102)
T ss_dssp             EEETTEEEEEEEEEEEE
T ss_pred             EEECCcEEEEEEEEEEE
Confidence            99999999999999987

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.4e-13  Score=117.21  Aligned_cols=113  Identities=25%  Similarity=0.452  Sum_probs=93.5

Q ss_pred             CCCCCCC-CCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEE
Q psy8771         463 RGEGATT-PPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT  541 (904)
Q Consensus       463 ~g~~~~s-~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~  541 (904)
                      .|.|..+ ..+.++|..++| .+|.++.+...+.++|.|+|.+|...+|.+.+|.|+|+..+......+........+.+
T Consensus         2 ~G~G~pss~~v~~~T~~~~P-~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~~~~~~~~~   80 (117)
T d1wfoa1           2 IGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQY   80 (117)
T ss_dssp             CCCCCCCCCCSCCCCSCCCC-CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEEECTTCCEE
T ss_pred             ccCCCCCCCCEEEECCCCCC-cCCCCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEecCCceEEE
Confidence            4666555 457777877777 79999999999999999999999888889999999998877654444444445677889


Q ss_pred             EEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecC
Q psy8771         542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQ  576 (904)
Q Consensus       542 ~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~  576 (904)
                      .+.+|.|++.|.|+|+|+|..|.|++|....++|.
T Consensus        81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT~  115 (117)
T d1wfoa1          81 TATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE  115 (117)
T ss_dssp             EEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCS
T ss_pred             EECCCCCCCEEEEEEEEECCCcCCCCcCCEEEECC
Confidence            99999999999999999999999998887777664

>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

Probab=99.48  E-value=1.1e-13  Score=113.25  Aligned_cols=87  Identities=20%  Similarity=0.268  Sum_probs=76.8

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----cceEEEEeee--cCCeEEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      .+|.|...+.+ ..+.+|+++.|.|.+.|.|.|.|+|+|+ +..+..+.++..     +...|.|.++  +|+|.|+|.|
T Consensus         3 eaP~f~~~~~~-~~v~~g~~v~l~c~v~g~P~p~v~W~k~-~~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a   80 (98)
T d1g1ca_           3 EAPKIFERIQS-QTVGQGSDAHFRVRVVGKPDPECEWYKN-GVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKA   80 (98)
T ss_dssp             EEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred             cCCeEecCCCc-EEEcCCCcEEEEEEEEEecCCeEEEEeC-ceEEeeeeeeEEEeccceEEEEEeccCccccCEEEEEEE
Confidence            47899999988 9999999999999999999999999999 777777665432     2347999999  6999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                      .|..|..+..+.|.|+
T Consensus        81 ~N~~G~~~~~~~L~V~   96 (98)
T d1g1ca_          81 INIAGETSSHAFLLVQ   96 (98)
T ss_dssp             EETTEEEEEEEEEEEE
T ss_pred             EECCcEEEEEEEEEEE
Confidence            9999999999999997

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=8.1e-14  Score=117.32  Aligned_cols=104  Identities=35%  Similarity=0.587  Sum_probs=87.6

Q ss_pred             EecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCcc-EEE--Eec-CcceEEecCCCCC
Q psy8771         710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA-SIV--TLK-NQTSFVLDELKKW  785 (904)
Q Consensus       710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~-~~~--~~~-~~~~~~i~~L~p~  785 (904)
                      +|.+++|..||.++.+...+.+++.|+|++|.....++.+.+|.|.|+..+...... ...  ... ....+.|.+|.|+
T Consensus         2 ~T~~~~P~~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~   81 (109)
T d1va9a1           2 STEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKF   81 (109)
T ss_dssp             CSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSS
T ss_pred             CCcCCCCCCCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeeeEEecCCCeeEEEECCCCcc
Confidence            578888988999999999999999999999977777889999999999876433221 111  122 6789999999999


Q ss_pred             ceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         786 TEYRIWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       786 t~Y~~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      +.|.|+|+|.|..|.|++|.++.++|.+
T Consensus        82 t~Y~~~V~a~n~~G~g~~S~~v~~~T~e  109 (109)
T d1va9a1          82 AQYGVVVQAFNRAGTGPSSSEINATTLE  109 (109)
T ss_dssp             CCEEEEEEEEETTEECCCCCCEECCCCS
T ss_pred             eEEEEEEEEEcCCcCCCCCCCEEEEcCC
Confidence            9999999999999999999999999863

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=99.45  E-value=2.4e-13  Score=112.90  Aligned_cols=101  Identities=21%  Similarity=0.243  Sum_probs=82.9

Q ss_pred             CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEE
Q psy8771         714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWV  792 (904)
Q Consensus       714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V  792 (904)
                      ++|..+|.++++...+.++|.|+|++++....||++.+|.|+|+..+............ ..+++.|.+|.+++.|.|+|
T Consensus         2 ~~P~~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   81 (105)
T d1cfba2           2 DVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKV   81 (105)
T ss_dssp             CCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEE
T ss_pred             CCCCCCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEEEecCCCccEEEECCCCCCCEEEEEE
Confidence            56777899999999999999999998766778999999999999877554433333334 78899999999999999999


Q ss_pred             EEeeCCCCCCCCCcE-EeecCCC
Q psy8771         793 LAGTSIGDGPSSYPI-TIRTHED  814 (904)
Q Consensus       793 ~a~~~~g~g~~s~~~-~~~t~~~  814 (904)
                      +|.|..|.|++|..+ ...|.++
T Consensus        82 ~A~N~~G~gp~S~~~v~~~t~Ed  104 (105)
T d1cfba2          82 VAINDRGESNVAAEEVVGYSGED  104 (105)
T ss_dssp             EEEETTEECSSCCCCEEEESSSC
T ss_pred             EEEeCCcCCCCCCCcEeEcCCCC
Confidence            999999999988654 4466553

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=7.6e-14  Score=115.43  Aligned_cols=99  Identities=42%  Similarity=0.675  Sum_probs=84.4

Q ss_pred             EEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCce
Q psy8771         572 LVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENI  651 (904)
Q Consensus       572 ~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~  651 (904)
                      .+.|..+.|.+|.++++...+.+++.|+|.++.                                           ++.+
T Consensus         3 ~v~T~~~vP~~P~~~~~~~~~~~si~l~W~~p~-------------------------------------------~~~i   39 (102)
T d1x5za1           3 QVITQTGVPGQPLNFKAEPESETSILLSWTPPR-------------------------------------------SDTI   39 (102)
T ss_dssp             CCCCCSCCCCCCEEEEEECSSSSEEEEEEECCS-------------------------------------------CCCC
T ss_pred             EEECCCCCCcCCCCeEEEEccCCEEEEEEECCC-------------------------------------------CCCc
Confidence            456777888889999999999999999999873                                           4568


Q ss_pred             eeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771         652 ISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ  713 (904)
Q Consensus       652 ~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~  713 (904)
                      .+|.|+|+..+.............++.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|.+
T Consensus        40 ~~Y~i~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e  101 (102)
T d1x5za1          40 ANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ  101 (102)
T ss_dssp             CEEEECBEESSSCCCBCCEECSSSEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred             cceEEEEEeCCCCceEEEEcCCcCEEEECCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence            89999999887666655555666799999999999999999999999999999999999865

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.3e-13  Score=114.20  Aligned_cols=94  Identities=36%  Similarity=0.640  Sum_probs=80.0

Q ss_pred             CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEE
Q psy8771         714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWV  792 (904)
Q Consensus       714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V  792 (904)
                      ..|. +|.+|.+...+.+++.|+|++|  ...+|.+.+|.|+|+..+...+.    .+. ..+++.|.+|+|++.|.|+|
T Consensus         9 ~vP~-~P~~l~v~~~s~~si~l~W~~P--~~~~g~i~~Y~v~~~~~~~~~~~----~~~~~~~~~~i~~L~p~t~Y~~~V   81 (103)
T d1x5ga1           9 QLPG-PAPNLRAYAASPTSITVTWETP--VSGNGEIQNYKLYYMEKGTDKEQ----DVDVSSHSYTINGLKKYTEYSFRV   81 (103)
T ss_dssp             SCCC-CCSSCEEEEEETTEEEEECCCC--SCCSSCCSEEEEEEEETTCCCCC----CEEECSSEEEECSCCTTCEEEEEE
T ss_pred             CCcc-cCCCcEEEEccCCEEEEEEECC--cCCCccEEEEEEEEEeCCCceeE----EEeccccEEecCCCCCCCEEEEEE
Confidence            4455 6889999999999999999988  45788999999999987754432    222 67899999999999999999


Q ss_pred             EEeeCCCCCCCCCcEEeecCCC
Q psy8771         793 LAGTSIGDGPSSYPITIRTHED  814 (904)
Q Consensus       793 ~a~~~~g~g~~s~~~~~~t~~~  814 (904)
                      +|.|..|.|++|.++.++|.++
T Consensus        82 ~A~n~~G~g~~S~~v~v~T~eD  103 (103)
T d1x5ga1          82 VAYNKHGPGVSTPDVAVRTLSD  103 (103)
T ss_dssp             EEECSSCCCCBCCCCCEECCCS
T ss_pred             EEEcCCcCcCCCCCEEEEcCCC
Confidence            9999999999999999998753

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=4.9e-14  Score=133.84  Aligned_cols=183  Identities=16%  Similarity=0.120  Sum_probs=82.0

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      |.+|.++.+...++++|.|+|++|...+|.+.+|.|+|+........       ..........+.+.+.|.++|.+.+.
T Consensus         3 Ps~P~~~~~~~~s~~si~vsW~pP~~~ng~i~~Y~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~y~~~v~~~~~   75 (196)
T d2dtge2           3 PSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSEL-------FELDYCLKGLKLPSRTWSPPFESEDS   75 (196)
T ss_dssp             CCCCEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEECCCCSC-------TTCSSSCSCCCCCC------------
T ss_pred             CcCCcCCEEEeccCCEEEEEEECCCCCCCcEEEEEEEEEcCCCCCce-------eEEeeEEeccccceeEEEEEEEEEcC
Confidence            47899999999999999999999988889999999999876532211       11222334457788999999999998


Q ss_pred             CCCCCCCCcEEEecCCCCCC-------CCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeecc
Q psy8771         562 VGPGPLSAPVLVKTQQGVPS-------QPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQE  634 (904)
Q Consensus       562 ~g~~~~S~~~~~~t~~~~p~-------~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~  634 (904)
                      .+.+..+...........+.       .+..+.+.......+.+.|..+.                              
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------  125 (196)
T d2dtge2          76 QKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPR------------------------------  125 (196)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CccccCcCCccceecCCCCccccccccCCcCcEEEeccCCceeecccCcC------------------------------
Confidence            87665544333332222111       22223333333334444444332                              


Q ss_pred             ceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCC---CCCeeEEe
Q psy8771         635 TAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGAT---TPPIPVRT  711 (904)
Q Consensus       635 ~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~---s~~~~~~t  711 (904)
                                 ........|.+.+.................+++|.+|.|++.|.|+|+|+|..|.+..   +..+.++|
T Consensus       126 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT  194 (196)
T d2dtge2         126 -----------PSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSART  194 (196)
T ss_dssp             -----------------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEEC
T ss_pred             -----------CCccceEEEEEEeecCCCccEEEEeccceEEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeC
Confidence                       1222223333333333333333344456679999999999999999999999988754   33445554


Q ss_pred             c
Q psy8771         712 K  712 (904)
Q Consensus       712 ~  712 (904)
                      .
T Consensus       195 ~  195 (196)
T d2dtge2         195 M  195 (196)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=2.6e-13  Score=114.64  Aligned_cols=104  Identities=27%  Similarity=0.423  Sum_probs=85.6

Q ss_pred             eEEecCCCCCCCCCCcEEEe--cCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCC-ccEEEEec-CcceEEecCCC
Q psy8771         708 PVRTKQYVPGAPPQNVSCEP--LSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS-EASIVTLK-NQTSFVLDELK  783 (904)
Q Consensus       708 ~~~t~~~~p~~~P~~l~~~~--~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~-~~~~~~~~-~~~~~~i~~L~  783 (904)
                      ..+|.+.+|..||.++.+..  .+.++|.|+|++|  ...+|.+.+|.|+|+....... ........ ..+.++|.+|.
T Consensus         3 ~~~T~~~~P~~pP~~~~v~~~~~~~~sv~v~W~~P--~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~   80 (111)
T d1x5ka1           3 HGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPP--SEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELT   80 (111)
T ss_dssp             SSCSCCCCCCSCCEEEEEEECSSCTTCEEEEEECC--SCCSSCCCEEEEEEESCSSSCTTTSEEEEESTTCSEEEECSCC
T ss_pred             ceEeCCCCCCCCCCCcEEEEecCCCCEEEEEEEcc--ccCCCceeeeEEeeeecCCCCcceeEEEEeCCCeeEEEECCCC
Confidence            45678888988999988764  4677999999988  4678999999999987654433 22334444 78899999999


Q ss_pred             CCceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         784 KWTEYRIWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       784 p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      |++.|.|+|+|.|..|.|++|+.+.++|..
T Consensus        81 p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~  110 (111)
T d1x5ka1          81 LDTPYYFKIQARNSKGMGPMSEAVQFRTPK  110 (111)
T ss_dssp             SSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred             CCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence            999999999999999999999999999864

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=8.4e-13  Score=111.41  Aligned_cols=104  Identities=34%  Similarity=0.594  Sum_probs=87.5

Q ss_pred             eeecCCCCCCCCCCeEEEe--cCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCC
Q psy8771         474 VRTKQYEPGTAPRDVQVRP--LSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHT  550 (904)
Q Consensus       474 ~~t~~~~p~~~p~~l~v~~--~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t  550 (904)
                      ..|.+.+|..+|.++.+..  .+.+++.|+|++|...+|.+.+|.|+|..........|..... ...+.+.|.+|.|++
T Consensus         4 ~~T~~~~P~~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t   83 (111)
T d1x5ka1           4 GTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDT   83 (111)
T ss_dssp             SCSCCCCCCSCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEEEESTTCSEEEECSCCSSS
T ss_pred             eEeCCCCCCCCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEEEeCCCeeEEEECCCCCCC
Confidence            3456667888899888765  4667999999999888899999999999877666666666554 567789999999999


Q ss_pred             eEEEEEEEEeCCCCCCCCCcEEEecCC
Q psy8771         551 IYTIRVQAFTSVGPGPLSAPVLVKTQQ  577 (904)
Q Consensus       551 ~Y~~~V~a~~~~g~~~~S~~~~~~t~~  577 (904)
                      .|.|+|+|+|..|.|++|..+.++|..
T Consensus        84 ~Y~~~V~A~n~~G~g~~S~~v~~~T~~  110 (111)
T d1x5ka1          84 PYYFKIQARNSKGMGPMSEAVQFRTPK  110 (111)
T ss_dssp             EEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred             EEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence            999999999999999999999998853

>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.43  E-value=2e-13  Score=109.69  Aligned_cols=86  Identities=22%  Similarity=0.443  Sum_probs=71.5

Q ss_pred             CCCCeEEcC-CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEec
Q psy8771         102 RVPPQFSIP-PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       102 ~~~P~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      ..||.|... |.+ +.+.+|++++|.|.+.|.|.|.|+|+|+++...   .++...++.|.|.++  +|+|.|+|.|.|.
T Consensus         2 ~~~P~i~~~~p~~-~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~---~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~   77 (91)
T d1cs6a3           2 QYAPSIKAKFPAD-TYALTGQMVTLECFAFGNPVPQIKWRKLDGSQT---SKWLSSEPLLHIQNVDFEDEGTYECEAENI   77 (91)
T ss_dssp             CEEEEEEECCCSE-EEEETTCCEEEECEEEEESCCEEEEEECCSCCS---CCCSBSSSEEEECSCCGGGCEEEEEEEEET
T ss_pred             ccCCeEEeeCCCc-EEEecCCcEEEEEEEEEccCCEEEEEecccccc---eEeeeeeeEEEeCCCCccCCEEEEEEEEEC
Confidence            346777654 566 999999999999999999999999999844322   233446789999999  6999999999999


Q ss_pred             CcceEEEEEEEEE
Q psy8771         179 LGVIETSTIVKVQ  191 (904)
Q Consensus       179 ~g~~~~~~~l~v~  191 (904)
                      .|..+..+.|.|.
T Consensus        78 ~G~~~~~~~l~V~   90 (91)
T d1cs6a3          78 KGRDTYQGRIIIH   90 (91)
T ss_dssp             TEEEEEEEEEEEE
T ss_pred             CCEEEEEEEEEEE
Confidence            9999999998886

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2e-13  Score=113.81  Aligned_cols=98  Identities=31%  Similarity=0.466  Sum_probs=81.3

Q ss_pred             eeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCC
Q psy8771         707 IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKW  785 (904)
Q Consensus       707 ~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~  785 (904)
                      +.++|.+++|. +|.++++...+.+++.|+|++|  ...||.+.+|.|+|+..+....... .... ..+++.|.+|.|+
T Consensus         2 v~v~T~e~vP~-~p~~l~~~~~~~~sv~l~W~~P--~~~ng~i~~Y~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~   77 (106)
T d1wfna1           2 QLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQEP--GEKNGILTGYRISWEEYNRTNTRVT-HYLPNVTLEYRVTGLTAL   77 (106)
T ss_dssp             CSCCSSCCSCC-CCSCCEEESCCSSEEEEECCCC--TTCCSCCCEEEEEEEESSCGGGCCC-EEECSSCCEEEEESCCTT
T ss_pred             EEEEcCCCCCc-CCCCcEEEEecCCEEEEEEECC--CCCCCcEEeEEEEEEECCCCcceEE-EecCCCeeEEEEccCCCC
Confidence            45678888887 6899999999999999999988  4578999999999998765433222 3334 7789999999999


Q ss_pred             ceEEEEEEEeeCCCCCCCCCcEE
Q psy8771         786 TEYRIWVLAGTSIGDGPSSYPIT  808 (904)
Q Consensus       786 t~Y~~~V~a~~~~g~g~~s~~~~  808 (904)
                      +.|.|+|+|+|..|.|+.|....
T Consensus        78 t~Y~~~V~A~n~~G~g~~s~~~~  100 (106)
T d1wfna1          78 TTYTIEVAAMTSKGQGQVSASTI  100 (106)
T ss_dssp             CEEEEEEEEECSSCEEEEEEEEE
T ss_pred             CEEEEEEEEECCCCCcCCcCCEE
Confidence            99999999999999998887543

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=8e-13  Score=109.29  Aligned_cols=94  Identities=26%  Similarity=0.421  Sum_probs=82.5

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .|++|.+|.+...+.+++.|+|.++...++.+.+|.|+|+..+...+... .....++.|.+|.|++.|.|+|+|+|..|
T Consensus        10 vP~~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   88 (103)
T d1x5ga1          10 LPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDV-DVSSHSYTINGLKKYTEYSFRVVAYNKHG   88 (103)
T ss_dssp             CCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCE-EECSSEEEECSCCTTCEEEEEEEEECSSC
T ss_pred             CcccCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEE-eccccEEecCCCCCCCEEEEEEEEEcCCc
Confidence            46789999999999999999999998888999999999998876655433 34567899999999999999999999999


Q ss_pred             CCCCCCCeeEEecCC
Q psy8771         700 EGATTPPIPVRTKQY  714 (904)
Q Consensus       700 ~~~~s~~~~~~t~~~  714 (904)
                      .|.+|..+.++|.++
T Consensus        89 ~g~~S~~v~v~T~eD  103 (103)
T d1x5ga1          89 PGVSTPDVAVRTLSD  103 (103)
T ss_dssp             CCCBCCCCCEECCCS
T ss_pred             CcCCCCCEEEEcCCC
Confidence            999999899988753

>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

Probab=99.41  E-value=8e-14  Score=112.12  Aligned_cols=83  Identities=20%  Similarity=0.407  Sum_probs=72.0

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      |+..|.+ +.+.+|+++.|.|.+.|.|.|.|.|+++ +..+..+.++.+    ..+.|.|.++  +|+|.|+|.|.|..|
T Consensus         2 ii~~P~~-~~v~~G~~~~l~C~~~g~P~p~v~W~~~-g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G   79 (91)
T d1tnna_           2 ILTKPRS-MTVYEGESARFSCDTDGEPVPTVTWLRK-GQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEG   79 (91)
T ss_dssp             CSBCCCC-EECSSSSCCCEEEECCCSSCCCCEEESS-SSTTCSSSSCEEEECSSEEEEECSSCCSCCCEEEEEECBCSSC
T ss_pred             EEeCCcC-EEEeCCCcEEEEEEEEEEeCCeEEEEEe-ecccccccceeeeeecceeEEeecCCCHHHCEEEEEEEEECCC
Confidence            5667777 9999999999999999999999999999 777766655442    4678999999  699999999999999


Q ss_pred             ceEEEEEEEEE
Q psy8771         181 VIETSTIVKVQ  191 (904)
Q Consensus       181 ~~~~~~~l~v~  191 (904)
                      ..+..+.|.|+
T Consensus        80 ~~~~~~~l~V~   90 (91)
T d1tnna_          80 KQEAEFTLTIQ   90 (91)
T ss_dssp             BCCEEEEEECC
T ss_pred             EEEEEEEEEEE
Confidence            99998888875

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.1e-12  Score=106.89  Aligned_cols=92  Identities=25%  Similarity=0.347  Sum_probs=78.5

Q ss_pred             CCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCC
Q psy8771         720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIG  799 (904)
Q Consensus       720 P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g  799 (904)
                      |..+.+...+.++|.|+|++|  ...+|.+.+|.|+++......+.... .....+.+.+.+|.|++.|.|+|+|.|..|
T Consensus         4 ~~~l~~~~~t~~si~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   80 (95)
T d2djsa1           4 VPIMHQVSATMRSITLSWPQP--EQPNGIILDYEIRYYEKEHNEFNSSM-ARSQTNTARIDGLRPGMVYVVQVRARTVAG   80 (95)
T ss_dssp             CSCCEEEEECSSEEEEECCCC--SCCSSCEEEEEEEEEETTSCSTTCEE-EEESSSEEEEESCCTTCEEEEEEEEEESSC
T ss_pred             CCccEEEeecCCEEEEEEEEC--CCCCcceEEeeeeeeeeccCcceeEe-ecCCccEEEEeecCCccEEEEEEEEEcCCC
Confidence            457999999999999999998  46789999999999988765443332 222778999999999999999999999999


Q ss_pred             CCCCCCcEEeecCCC
Q psy8771         800 DGPSSYPITIRTHED  814 (904)
Q Consensus       800 ~g~~s~~~~~~t~~~  814 (904)
                      .|++|+++.++|.++
T Consensus        81 ~g~~S~~~~~~T~~d   95 (95)
T d2djsa1          81 YGKFSGKMCFQTLTD   95 (95)
T ss_dssp             EEEECCCEEEECCCS
T ss_pred             CCCCCCCEEEEeCCC
Confidence            999999999999763

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.4e-13  Score=116.12  Aligned_cols=107  Identities=32%  Similarity=0.460  Sum_probs=87.6

Q ss_pred             ceeeecCCCCCCCCCCeEEEecCCceEEEEecCCC--CCCCceeeEEEEEEeCCCCCCcceEE--EeecCceEEEEcCCC
Q psy8771         472 IPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPE--TPNGQITGYKVYYTQDQSLPMSAWET--QVVDNNQLTTISDLT  547 (904)
Q Consensus       472 ~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~L~  547 (904)
                      +.++|..++|..+|.++.+...+.+++.|+|++|.  ..+|.+.+|.|+|+..+..   .+..  .......++.|.+|.
T Consensus         2 v~v~T~~~~P~~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~---~~~~~~~~~~~~~~~~i~~L~   78 (119)
T d1x5ha1           2 VAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK---SDVTETLVSGTQLSQLIEGLD   78 (119)
T ss_dssp             CCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE---EEEECCBCCTTCCEEEEECCC
T ss_pred             EEEEcCCCCCCCCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccc---cceeeeecCCCccEEEeCCCC
Confidence            35677777887889999999999999999999863  4567899999999887632   1211  223567789999999


Q ss_pred             CCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCC
Q psy8771         548 PHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS  581 (904)
Q Consensus       548 p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~  581 (904)
                      |++.|.|+|+|+|..|.|++|..+.++|....+.
T Consensus        79 p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~~~~  112 (119)
T d1x5ha1          79 RGTEYNFRVAALTINGTGPATDWLSAETFESDLD  112 (119)
T ss_dssp             SSCEEEEECEEEETTEEEEECCCEEEECCSSCCC
T ss_pred             CCCEEEEEEEEEcCCcCCCCCCCEEEEeCCCCCC
Confidence            9999999999999999999999999999766554

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.1e-13  Score=112.72  Aligned_cols=100  Identities=35%  Similarity=0.520  Sum_probs=84.0

Q ss_pred             eeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCc
Q psy8771         707 IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWT  786 (904)
Q Consensus       707 ~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t  786 (904)
                      +.+.|...+|. +|.++++...+.+++.|+|++|.    ++.+.+|.|+|+..+....  ........+++.|.+|+|++
T Consensus         2 v~v~T~~~vP~-~P~~~~~~~~~~~si~l~W~~p~----~~~i~~Y~i~y~~~~~~~~--~~~~~~~~~~~~i~~L~p~t   74 (102)
T d1x5za1           2 IQVITQTGVPG-QPLNFKAEPESETSILLSWTPPR----SDTIANYELVYKDGEHGEE--QRITIEPGTSYRLQGLKPNS   74 (102)
T ss_dssp             CCCCCCSCCCC-CCEEEEEECSSSSEEEEEEECCS----CCCCCEEEECBEESSSCCC--BCCEECSSSEEEEECCCTTC
T ss_pred             eEEECCCCCCc-CCCCeEEEEccCCEEEEEEECCC----CCCccceEEEEEeCCCCce--EEEEcCCcCEEEECCCCCCC
Confidence            45678888886 68999999999999999999883    4678999999998765433  22233366789999999999


Q ss_pred             eEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         787 EYRIWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       787 ~Y~~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      .|.|+|+|.|..|.|++|..+.++|.+
T Consensus        75 ~Y~~~V~A~n~~G~g~~S~~v~~~T~e  101 (102)
T d1x5za1          75 LYYFRLAARSPQGLGASTAEISARTMQ  101 (102)
T ss_dssp             EEEECEEEECSSCEEEECCCEEEECCC
T ss_pred             EEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence            999999999999999999999999965

>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3, second domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Tyrosine-protein kinase receptor tyro3, second domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=7.2e-13  Score=104.01  Aligned_cols=81  Identities=31%  Similarity=0.616  Sum_probs=67.3

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEEEEEecCcceE
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIE  183 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c~a~n~~g~~~  183 (904)
                      |.|...|.+ +.+.+|+++.|.|.+.|.|.| +|+|+|| +..+....   .....|.+.+++|+|.|+|.|.|..|...
T Consensus         2 P~f~~~P~~-~~v~~G~~~~l~C~~~g~P~P~~i~W~k~-g~~i~~~~---~~~~~l~~~~~~d~G~Y~C~A~N~~G~~~   76 (85)
T d1rhfa2           2 PFFTVEPKD-LAVPPNAPFQLSCEAVGPPEPVTIVWWRG-TTKIGGPA---PSPSVLNVTGVTQSTMFSCEAHNLKGLAS   76 (85)
T ss_dssp             CEEEECCCC-EEECTTCCEEEEEEEECSSSCCEEEEEET-TEECSCSE---ESSEEEEECCCSSCEEEEEEEEETTEEEE
T ss_pred             CcEEEeCCc-EEEcCCCEEEEEEEEecCCcceEEEEEEC-CEECCCCC---CcceEEecCCccccEEEEEEEEcCCCcEE
Confidence            789999998 999999999999999999998 8999999 76665432   24556777778999999999999999743


Q ss_pred             -EEEEEEE
Q psy8771         184 -TSTIVKV  190 (904)
Q Consensus       184 -~~~~l~v  190 (904)
                       ..+.|.|
T Consensus        77 S~~~~v~V   84 (85)
T d1rhfa2          77 SRTATVHL   84 (85)
T ss_dssp             CCCEEEEE
T ss_pred             EEEEEEEE
Confidence             4666665

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=9.7e-13  Score=106.44  Aligned_cols=90  Identities=26%  Similarity=0.359  Sum_probs=77.2

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCC
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSV  562 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~  562 (904)
                      .+|.++.+...+.+++.|+|++|...++.+.+|.|+|+.....    +........+++.+.+|.|++.|.|+|+|+|..
T Consensus         2 ~~P~~~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~----~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   77 (93)
T d1x4xa1           2 DQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGS----MQICYCGPGLSYEIKGLSPATTYYCRVQALSVV   77 (93)
T ss_dssp             CCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTS----CCEEEEESCSEEEEESCCSSCEEEEEEEEECSS
T ss_pred             cCCCCCEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCc----ceEeecCCccEEEEcccceeeEEEEEEEEEECC
Confidence            5667777888899999999999988888999999999986532    334455677889999999999999999999999


Q ss_pred             CCCCCCCcEEEecC
Q psy8771         563 GPGPLSAPVLVKTQ  576 (904)
Q Consensus       563 g~~~~S~~~~~~t~  576 (904)
                      |.|++|..+.++|+
T Consensus        78 G~s~~S~~~~~~Tp   91 (93)
T d1x4xa1          78 GAGPFSEVVACVTP   91 (93)
T ss_dssp             CCCCBCCCEEEECC
T ss_pred             cCcCCCCcEEEEeC
Confidence            99999999988884

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.39  E-value=7.6e-13  Score=109.15  Aligned_cols=98  Identities=17%  Similarity=0.194  Sum_probs=82.7

Q ss_pred             CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCc-cEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771         716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE-ASIVTLK-NQTSFVLDELKKWTEYRIWVL  793 (904)
Q Consensus       716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~-~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~  793 (904)
                      |..+|.++.+..++.+++.|+|+.++....+|.+.+|.|+|+..+..... ....... ....++|.+|++++.|.|+|+
T Consensus         1 P~~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~   80 (101)
T d1x4ya1           1 PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQ   80 (101)
T ss_dssp             CCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEEE
T ss_pred             CCCCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEEcCCeeEEEEcCCCCCCEEEEEEE
Confidence            45579999999999999999999877677889999999999987644332 2222334 778999999999999999999


Q ss_pred             EeeCCCCCCCCCcEEeecCC
Q psy8771         794 AGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       794 a~~~~g~g~~s~~~~~~t~~  813 (904)
                      |+|..|.|++|+.+.++|..
T Consensus        81 a~n~~G~s~~S~~~~~~T~~  100 (101)
T d1x4ya1          81 CFNEGGESEFSNVMICETKA  100 (101)
T ss_dssp             EECTTCCCCCCCCEEEECCC
T ss_pred             EEcCCCCCCCCCcEEEEccC
Confidence            99999999999999999864

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=7e-13  Score=114.67  Aligned_cols=109  Identities=26%  Similarity=0.438  Sum_probs=89.3

Q ss_pred             EEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCC------ccEEEEec-CcceEEecC
Q psy8771         709 VRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS------EASIVTLK-NQTSFVLDE  781 (904)
Q Consensus       709 ~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~------~~~~~~~~-~~~~~~i~~  781 (904)
                      -.|.+++|..+|.+|++..++.++|.|+|++|.....++.+.+|.+.+........      ......+. ....++|.+
T Consensus         7 ~~s~e~~P~~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   86 (125)
T d1uena_           7 GHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPG   86 (125)
T ss_dssp             CCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEES
T ss_pred             ccccCcCCCCCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEeCCCccEEEECC
Confidence            34667889889999999999999999999998655567889999999987643221      11222333 778999999


Q ss_pred             CCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771         782 LKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS  817 (904)
Q Consensus       782 L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~  817 (904)
                      |.|++.|.|+|+|.|..|.|++|.++.++|.++.|.
T Consensus        87 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp  122 (125)
T d1uena_          87 LEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP  122 (125)
T ss_dssp             CCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSS
T ss_pred             CCCCCEEEEEEEEEeCCcccCCCCCEEEECCCCCcC
Confidence            999999999999999999999999999999877663

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.6e-12  Score=107.88  Aligned_cols=100  Identities=16%  Similarity=0.279  Sum_probs=84.5

Q ss_pred             eeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEE
Q psy8771         474 VRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT  553 (904)
Q Consensus       474 ~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~  553 (904)
                      ++|.. .+|.+|.++++...+.++|.|+|.+|.+.++++.+|.|+++.....  ..+..........+.+.+|.|++.|.
T Consensus         4 f~T~~-~~P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~--~~~~~~~~~~~~~~~~~~L~p~t~Y~   80 (105)
T d1x3da1           4 FTTLS-CEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN--GEFCQCYMGSQKQFKITKLSPAMGCK   80 (105)
T ss_dssp             CCCCC-SCCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSS--SCCEEEEEESCSEEEEESCCTTCEEE
T ss_pred             EECCC-CCCcCCCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCc--ceeEEEecCCccEEEecCCcCCcEEE
Confidence            45555 4457899999999999999999999988778999999999866543  33445555678889999999999999


Q ss_pred             EEEEEEeCCCCCCCCCcEEEecC
Q psy8771         554 IRVQAFTSVGPGPLSAPVLVKTQ  576 (904)
Q Consensus       554 ~~V~a~~~~g~~~~S~~~~~~t~  576 (904)
                      |+|+|+|..|.|++|..+.+.|.
T Consensus        81 frV~A~N~~G~s~~S~~~~~~T~  103 (105)
T d1x3da1          81 FRLSARNDYGTSGFSEEVLYYTS  103 (105)
T ss_dssp             EECCEEESSCBCCCCCCEEEECS
T ss_pred             EEEEEECCCeEcCCCCcEEEECC
Confidence            99999999999999999988874

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=4.9e-13  Score=113.45  Aligned_cols=103  Identities=23%  Similarity=0.317  Sum_probs=81.2

Q ss_pred             ecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEE
Q psy8771         711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYR  789 (904)
Q Consensus       711 t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~  789 (904)
                      +..+.|. +|.++.+..++.++|.|+|+++  ...++++.+|.|+|+....... +...... ..+.++|.+|+|++.|.
T Consensus        11 ~~~~~P~-pP~~~~v~~~~~~sv~l~W~p~--~~~~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~v~~L~p~t~Y~   86 (117)
T d1uema_          11 DLSDLPG-PPSKPQVTDVTKNSVTLSWQPG--TPGTLPASAYIIEAFSQSVSNS-WQTVANHVKTTLYTVRGLRPNTIYL   86 (117)
T ss_dssp             CSCCSCB-CCCCCEEEEECSSCEEEECCCC--BCSSSCCCEEEEEEEETTTEEE-EEEEEEEECSSEEEECSCCTTCEEE
T ss_pred             eeCccCc-CCCCCEEEEccCCEEEEEEECC--CcCCCCeEEEEEEEeccCCcee-eEEeccccccccceECCCCCCCEEE
Confidence            3345565 6899999999999999999977  4566789999999988764332 2222223 77889999999999999


Q ss_pred             EEEEEeeCCCCCCCCCcE-EeecCCCCCC
Q psy8771         790 IWVLAGTSIGDGPSSYPI-TIRTHEDDPS  817 (904)
Q Consensus       790 ~~V~a~~~~g~g~~s~~~-~~~t~~~~P~  817 (904)
                      |+|+|.|..|.|.+|... .++|.+.+|+
T Consensus        87 frV~A~N~~G~s~~S~~s~~v~t~~~~Ps  115 (117)
T d1uema_          87 FMVRAINPQGLSDPSPMSDPVRTQDSGPS  115 (117)
T ss_dssp             EEEEEEETTEEEEECCCCCCEECCCSSCC
T ss_pred             EEEEEEeCCcCCCCcCCCcCEEeCCCCcC
Confidence            999999999999888764 3788888774

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.7e-12  Score=105.74  Aligned_cols=93  Identities=18%  Similarity=0.303  Sum_probs=81.8

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      |++|..+.+...+.++++|+|.++...++.+.+|.|+|+....... ..........+.|.+|.|++.|.|+|+|+|..|
T Consensus         1 P~~~~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   80 (95)
T d2djsa1           1 PSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAG   80 (95)
T ss_dssp             CCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSC
T ss_pred             CCCCCccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeecCCccEEEEeecCCccEEEEEEEEEcCCC
Confidence            4577889999999999999999998889999999999998876665 334445667999999999999999999999999


Q ss_pred             CCCCCCCeeEEecC
Q psy8771         700 EGATTPPIPVRTKQ  713 (904)
Q Consensus       700 ~~~~s~~~~~~t~~  713 (904)
                      .|.+|..+.++|.+
T Consensus        81 ~g~~S~~~~~~T~~   94 (95)
T d2djsa1          81 YGKFSGKMCFQTLT   94 (95)
T ss_dssp             EEEECCCEEEECCC
T ss_pred             CCCCCCCEEEEeCC
Confidence            99999999999874

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.3e-12  Score=106.53  Aligned_cols=94  Identities=23%  Similarity=0.394  Sum_probs=74.1

Q ss_pred             CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEE
Q psy8771         579 VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW  658 (904)
Q Consensus       579 ~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~  658 (904)
                      +|++|..+++...+.+++.|+|.+|..                                         .++.+.+|+|+|
T Consensus         3 ~P~~p~~~~~~~~s~~si~v~W~~P~~-----------------------------------------~~g~i~~Y~v~y   41 (98)
T d1x5la1           3 APSQVVVIRQERAGQTSVSLLWQEPEQ-----------------------------------------PNGIILEYEIKY   41 (98)
T ss_dssp             CCCCCCCEECSCBCSSCEEEEECCCSC-----------------------------------------CCSCCCEEEEEE
T ss_pred             CCCCCCceEEEeccCCEEEEEEECCCC-----------------------------------------CCCCEEEEEEEe
Confidence            456666677666677777777776654                                         677889999999


Q ss_pred             EeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771         659 NDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ  713 (904)
Q Consensus       659 ~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~  713 (904)
                      +..+.... ..........++|.+|+|++.|.|+|+|+|..|.|.+|..+.++|.+
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~~   97 (98)
T d1x5la1          42 YEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGK   97 (98)
T ss_dssp             EESSSCCSSCEEEEESSSEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCC
T ss_pred             ecccccceeeEEecCCceEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcCC
Confidence            88765544 33344566799999999999999999999999999999999998863

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.6e-13  Score=130.19  Aligned_cols=184  Identities=14%  Similarity=0.126  Sum_probs=82.8

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .|++|.++.+...+.+++.|+|.++...++.+.+|.|+|+........    ..........|.+.+.|.++|.|.+..|
T Consensus         2 ~Ps~P~~~~~~~~s~~si~vsW~pP~~~ng~i~~Y~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~y~~~v~~~~~~~   77 (196)
T d2dtge2           2 NPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSEL----FELDYCLKGLKLPSRTWSPPFESEDSQK   77 (196)
T ss_dssp             CCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEECCCCSC----TTCSSSCSCCCCCC--------------
T ss_pred             cCcCCcCCEEEeccCCEEEEEEECCCCCCCcEEEEEEEEEcCCCCCce----eEEeeEEeccccceeEEEEEEEEEcCCc
Confidence            467999999999999999999999988888999999999876544331    1112233345678899999999999887


Q ss_pred             CCCCCCCeeEEecCCCCC------CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-
Q psy8771         700 EGATTPPIPVRTKQYVPG------APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-  772 (904)
Q Consensus       700 ~~~~s~~~~~~t~~~~p~------~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-  772 (904)
                      .+..+......+....+.      ..+..+.+.......+.+.|..+..  .......|.+.+.......   ...... 
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~  152 (196)
T d2dtge2          78 HNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRP--SRKRRSLGDVGNAGNNEEH---RPFEKVV  152 (196)
T ss_dssp             --------------------------------------------------------------------CC---SCSCEEC
T ss_pred             cccCcCCccceecCCCCccccccccCCcCcEEEeccCCceeecccCcCC--CccceEEEEEEeecCCCcc---EEEEecc
Confidence            765443333332221111      1234455555566677777776632  1111222222222222111   112222 


Q ss_pred             CcceEEecCCCCCceEEEEEEEeeCCCCCCC---CCcEEeecC
Q psy8771         773 NQTSFVLDELKKWTEYRIWVLAGTSIGDGPS---SYPITIRTH  812 (904)
Q Consensus       773 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~---s~~~~~~t~  812 (904)
                      ..+.++|.+|.|++.|.|+|+|+|..|.+..   +..+.++|.
T Consensus       153 ~~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~  195 (196)
T d2dtge2         153 NKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTM  195 (196)
T ss_dssp             SCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECC
T ss_pred             ceEEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCC
Confidence            7789999999999999999999999988754   445666664

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.4e-12  Score=106.35  Aligned_cols=94  Identities=28%  Similarity=0.406  Sum_probs=80.3

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEe
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFT  560 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~  560 (904)
                      +|.+|.++++...+.++|.|+|.+|...+|.+.+|.|+|+..+.....  ........+++.|.+|.|++.|.|+|+|.|
T Consensus         3 ~P~~p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~--~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n   80 (98)
T d1x5la1           3 APSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS--YSTLKAVTTRATVSGLKPGTRYVFQVRART   80 (98)
T ss_dssp             CCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS--CEEEEESSSEEEECSCCTTCEEEECEEEEE
T ss_pred             CCCCCCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeeccccccee--eEEecCCceEEEECCCCCCCEEEEEEEEEc
Confidence            346888999999999999999999988888999999999987644222  233345678899999999999999999999


Q ss_pred             CCCCCCCCCcEEEecC
Q psy8771         561 SVGPGPLSAPVLVKTQ  576 (904)
Q Consensus       561 ~~g~~~~S~~~~~~t~  576 (904)
                      ..|.|.+|..+.++|.
T Consensus        81 ~~G~g~~S~~v~~~T~   96 (98)
T d1x5la1          81 SAGCGRFSQAMEVETG   96 (98)
T ss_dssp             TTEECCCCCCEEEECC
T ss_pred             CCCCcCCCCCEEEEcC
Confidence            9999999999999884

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=6.7e-13  Score=110.40  Aligned_cols=98  Identities=22%  Similarity=0.417  Sum_probs=81.4

Q ss_pred             CCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEE
Q psy8771         713 QYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIW  791 (904)
Q Consensus       713 ~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~  791 (904)
                      ...|. +|.+|.+..++.+++.|+|++|. ...++.+.+|.|+|+..+...+. ...... ..+.++|.+|.|++.|.|+
T Consensus         8 ~~~P~-~P~~l~~~~~~~~sv~lsW~~P~-~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~p~t~Y~~r   84 (107)
T d1x5fa1           8 GPLPS-APRDVVASLVSTRFIKLTWRTPA-SDPHGDNLTYSVFYTKEGIARER-VENTSHPGEMQVTIQNLMPATVYIFR   84 (107)
T ss_dssp             CCCCC-CCEEEEEEEECSSCEEEEEECCS-SCSSCCSSEEEEEEEETTCCCCE-EEECSSTTCSEEEECSCCTTCEEEEE
T ss_pred             CCCCc-CCCccEEEEecCCEEEEEEECCc-cCCCCceEEEEEEEEeCCCCceE-EEEEeCCCccEEEecCCCCCCEEEEE
Confidence            34455 68999999999999999999875 35678899999999987655442 222233 8889999999999999999


Q ss_pred             EEEeeCCCCCCCCCcEEeecCC
Q psy8771         792 VLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       792 V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      |+|.|..|.|++|.++.++|.+
T Consensus        85 V~A~n~~G~g~~S~~i~v~T~~  106 (107)
T d1x5fa1          85 VMAQNKHGSGESSAPLRVETQP  106 (107)
T ss_dssp             EEEECSSCEEEECCCEEEECCC
T ss_pred             EEEEeCCCCcCCCCCEEEECCC
Confidence            9999999999999999999875

>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Vascular cell adhesion molecule-1 (VCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.2e-12  Score=104.88  Aligned_cols=82  Identities=21%  Similarity=0.383  Sum_probs=66.2

Q ss_pred             CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      .|...+.+.+|+.+.|.|.+.|.|.|.|+|+++++..+....+.....+.|.|.++  +|+|.|+|.|.|..|..+.++.
T Consensus         6 ~P~~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~   85 (90)
T d1vcaa2           6 TPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQ   85 (90)
T ss_dssp             ESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEE
T ss_pred             ECCCcEEEECCCEEEEEEeccCCCCceEEEEecCccceeeeeeeecCCcEEEEecccccccceEEEEEEeCCCEEEEEEE
Confidence            34443777899999999999999999999999844433322223346678999999  6999999999999999999998


Q ss_pred             EEEE
Q psy8771         188 VKVQ  191 (904)
Q Consensus       188 l~v~  191 (904)
                      |.|.
T Consensus        86 v~V~   89 (90)
T d1vcaa2          86 VEIY   89 (90)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8875

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=2e-12  Score=104.03  Aligned_cols=91  Identities=18%  Similarity=0.250  Sum_probs=76.1

Q ss_pred             CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEe
Q psy8771         716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAG  795 (904)
Q Consensus       716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~  795 (904)
                      |+.+|.+|++...+.++|.|+|.++..+ .++.+.+|.|++...+..     .......+.++|.+|+|++.|.|+|+|.
T Consensus         2 ~p~~p~~L~~~~~~~~si~vsW~~p~~~-~~~~~i~Y~i~~~~~~~~-----~~~~~~~t~~~i~~L~p~t~Y~~rV~A~   75 (94)
T d1x5aa1           2 ESLSGLSLKLVKKEPRQLELTWAGSRPR-NPGGNLSYELHVLNQDEE-----WHQMVLEPRVLLTKLQPDTTYIVRVRTL   75 (94)
T ss_dssp             CCCCSCCCCEEEEETTEEEEECCCCCSS-CCSSCCEEEEEEECSSCE-----EEEEESSSEEEEESCCSSCEEEEEEEEE
T ss_pred             cCCCCCceEEEEcCCCEEEEEEecccCC-CCCcEEEEEEEEecCCce-----EEEeeccCEEEECCCCCCCEEEEEEEEE
Confidence            3446899999999999999999998643 456677999999876531     1222367899999999999999999999


Q ss_pred             eCCCCCCCCCcEEeecC
Q psy8771         796 TSIGDGPSSYPITIRTH  812 (904)
Q Consensus       796 ~~~g~g~~s~~~~~~t~  812 (904)
                      |..|.|++|+.+.++|.
T Consensus        76 n~~G~g~~S~~~~~~T~   92 (94)
T d1x5aa1          76 TPLGPGPFSPDHEFRTS   92 (94)
T ss_dssp             CSSSCCCCCCCEEEECC
T ss_pred             cCCcCcCCCCCEEEEeC
Confidence            99999999999999996

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.36  E-value=1.6e-12  Score=105.60  Aligned_cols=90  Identities=16%  Similarity=0.166  Sum_probs=73.6

Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVL  793 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~  793 (904)
                      .|..+|.++.+..++.++|.|+|++|. ...++.+.+|.|+|+..+............ ..+.+.|.+|+|++.|.|+|+
T Consensus         5 ~P~~~P~~~~v~~~s~tsv~l~W~~P~-~~~~~~i~gY~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~   83 (95)
T d2ibga1           5 DPMPVPELLEIEEYSETAVVLHWSLAS-DADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQ   83 (95)
T ss_dssp             CCCCCCEECCCBCCSSSCEEEEEECCT-TCCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEE
T ss_pred             CCCCCCcCeEEEEeCCCEEEEEEEeee-eccCCcccccceeEeeeeecceeeeeeccCCceeEEEEeeccCCeEEEEEEE
Confidence            355578999999999999999999775 345678999999999876544333333334 788999999999999999999


Q ss_pred             EeeCCCCCCCCC
Q psy8771         794 AGTSIGDGPSSY  805 (904)
Q Consensus       794 a~~~~g~g~~s~  805 (904)
                      |.|..|.|++|.
T Consensus        84 A~n~~G~s~~Ss   95 (95)
T d2ibga1          84 SFSAASASEFSA   95 (95)
T ss_dssp             EECSSCBCCCCC
T ss_pred             EEeCCccCCCCC
Confidence            999999998873

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.6e-12  Score=104.13  Aligned_cols=92  Identities=20%  Similarity=0.304  Sum_probs=73.9

Q ss_pred             CCCCCeEEE-ecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEe
Q psy8771         483 TAPRDVQVR-PLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFT  560 (904)
Q Consensus       483 ~~p~~l~v~-~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~  560 (904)
                      .+|....+. ....++|.|+|++|...+| .+.+|.|+++..+.   ..|........+++.+.+|.+++.|.|+|+|.|
T Consensus         3 ~p~~pp~~~~~~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N   79 (97)
T d2crza1           3 GPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEK---DEPREVYQGSEVECTVSSLLPGKTYSFRLRAAN   79 (97)
T ss_dssp             CCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTS---CCCEEEEEESCSEEEEESCCTTCEEEECCEEEC
T ss_pred             CcCCCCEEeeeeeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcC---CceeEeecCCceEEEEcCCCCCEEEEEEEEEec
Confidence            333334443 3567899999999876665 78999999998763   446666667778899999999999999999999


Q ss_pred             CCCCCCCCCcEEEecCC
Q psy8771         561 SVGPGPLSAPVLVKTQQ  577 (904)
Q Consensus       561 ~~g~~~~S~~~~~~t~~  577 (904)
                      ..|.|++|+...+.|.+
T Consensus        80 ~~G~s~~S~~~~~~T~p   96 (97)
T d2crza1          80 KMGFGPFSEKCDITTAP   96 (97)
T ss_dssp             SSCBCCCCCCEEEECCC
T ss_pred             CCeEcCCcCCCeEEeCc
Confidence            99999999999888853

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.8e-12  Score=107.53  Aligned_cols=99  Identities=20%  Similarity=0.366  Sum_probs=79.3

Q ss_pred             EecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCcee
Q psy8771         573 VKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENII  652 (904)
Q Consensus       573 ~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~  652 (904)
                      ++|...+|.+|..+++...+.+++.|+|.++..                                         +++.+.
T Consensus         4 f~T~~~~P~~P~~~~~~~~~~~sv~l~W~pp~~-----------------------------------------~~~~i~   42 (105)
T d1x3da1           4 FTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSD-----------------------------------------NGSKIQ   42 (105)
T ss_dssp             CCCCCSCCCCCCCCEEEEEETTEEEEECCCCCC-----------------------------------------CSSCEE
T ss_pred             EECCCCCCcCCCCCEEEEccCCEEEEEEECCCC-----------------------------------------CcCccE
Confidence            456667777788888888888888888887754                                         566788


Q ss_pred             eEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEec
Q psy8771         653 SYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK  712 (904)
Q Consensus       653 ~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~  712 (904)
                      +|.|+++....... ..........+.+.+|.|++.|.|+|+|+|..|.|.+|+.+.+.|.
T Consensus        43 ~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~  103 (105)
T d1x3da1          43 NFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS  103 (105)
T ss_dssp             EEEEEECTTTSSSCCEEEEEESCSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred             EEEEEEecCCCcceeEEEecCCccEEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence            88888876655544 3344456679999999999999999999999999999999988874

>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR2a [TaxId: 9606]

Probab=99.36  E-value=4.7e-13  Score=108.95  Aligned_cols=75  Identities=25%  Similarity=0.523  Sum_probs=64.0

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCce-----eecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKL-----PVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI  187 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~-----~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~  187 (904)
                      +.+..|+.+.|.|.+.|.|.|.|.|+|+ +..+....++     ..+.++|.|.++  +|+|.|+|.|.|..|..+.++.
T Consensus        15 ~~v~~G~~v~l~C~~~g~P~p~i~W~kn-g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~   93 (97)
T d3dara1          15 HAVPAANTVKFRCPAGGNPMPTMRWLKN-GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYH   93 (97)
T ss_dssp             EEECTTCCEEEECCEEEESCCEEEEEET-TEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred             EEECCCCcEEEEEEEeEECCCEEEEEEC-CEeccccCceeeEEEcCCcEEEEECCCCcccCEEEEEEEEECCCEEEEEEE
Confidence            6788999999999999999999999999 7666544322     224578999998  6999999999999999999888


Q ss_pred             EEE
Q psy8771         188 VKV  190 (904)
Q Consensus       188 l~v  190 (904)
                      |.|
T Consensus        94 l~V   96 (97)
T d3dara1          94 LDV   96 (97)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            877

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=3.2e-12  Score=103.34  Aligned_cols=91  Identities=22%  Similarity=0.358  Sum_probs=80.2

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  700 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~  700 (904)
                      |.+|.++.+...+.+++.|+|.++..+++.+.+|.|+|+..+...+ .......++++|.+|.|++.|.|+|+|+|..|.
T Consensus         1 P~~P~~~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   79 (93)
T d1x4xa1           1 PDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQ-ICYCGPGLSYEIKGLSPATTYYCRVQALSVVGA   79 (93)
T ss_dssp             CCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCC-EEEEESCSEEEEESCCSSCEEEEEEEEECSSCC
T ss_pred             CcCCCCCEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcce-EeecCCccEEEEcccceeeEEEEEEEEEECCcC
Confidence            4678899999999999999999998888899999999998765543 455566789999999999999999999999999


Q ss_pred             CCCCCCeeEEec
Q psy8771         701 GATTPPIPVRTK  712 (904)
Q Consensus       701 ~~~s~~~~~~t~  712 (904)
                      |.+|..+.++|.
T Consensus        80 s~~S~~~~~~Tp   91 (93)
T d1x4xa1          80 GPFSEVVACVTP   91 (93)
T ss_dssp             CCBCCCEEEECC
T ss_pred             cCCCCcEEEEeC
Confidence            999999988885

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=2e-12  Score=109.56  Aligned_cols=99  Identities=24%  Similarity=0.362  Sum_probs=80.1

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a  558 (904)
                      .| .+|.++.+..++.++|.|+|+++.+.++.+.+|.|+|+.....  ..|..... ...+.+.+.+|+|++.|.|+|+|
T Consensus        15 ~P-~pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A   91 (117)
T d1uema_          15 LP-GPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVS--NSWQTVANHVKTTLYTVRGLRPNTIYLFMVRA   91 (117)
T ss_dssp             SC-BCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTE--EEEEEEEEEECSSEEEECSCCTTCEEEEEEEE
T ss_pred             cC-cCCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCc--eeeEEeccccccccceECCCCCCCEEEEEEEE
Confidence            44 6899999999999999999999877777899999998876532  44655443 45678999999999999999999


Q ss_pred             EeCCCCCCCCCcE-EEecCCCCCC
Q psy8771         559 FTSVGPGPLSAPV-LVKTQQGVPS  581 (904)
Q Consensus       559 ~~~~g~~~~S~~~-~~~t~~~~p~  581 (904)
                      +|..|.|.+|... .++|....|.
T Consensus        92 ~N~~G~s~~S~~s~~v~t~~~~Ps  115 (117)
T d1uema_          92 INPQGLSDPSPMSDPVRTQDSGPS  115 (117)
T ss_dssp             EETTEEEEECCCCCCEECCCSSCC
T ss_pred             EeCCcCCCCcCCCcCEEeCCCCcC
Confidence            9999998888765 3666655543

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.35  E-value=5.5e-13  Score=108.67  Aligned_cols=88  Identities=18%  Similarity=0.357  Sum_probs=71.1

Q ss_pred             CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEE
Q psy8771         716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLA  794 (904)
Q Consensus       716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a  794 (904)
                      |+.+|.++.+..++.++++|+|.+|. +..++++.+|.|+|+..++..+... .... ..+.+++.+|.+++.|.|+|+|
T Consensus         1 PP~~P~~~~v~~~~~~sv~l~W~pP~-~~~~~~i~~Y~V~~~~~~~~~~~~~-~~~~~~~~~~~v~~L~~~~~Y~frV~A   78 (98)
T d1x5ya1           1 PTSAPQHLTVEDVTDTTTTLKWRPPD-RIGAGGIDGYLVEYCLEGSEEWVPA-NKEPVERCGFTVKDLPTGARILFRVVG   78 (98)
T ss_dssp             CCCCCEEEEEEEECSSEEEEEEECCS-CCCSSCCCEEEEEEEETTCCCCEES-SSSCBSSSEEEEECCCTTCCEEEEEEE
T ss_pred             CCCCCcCcEEEEccCCEEEEEEECCC-cCCCCCceEEEEEEEecCcceeEEe-eeecCceeEEEECCCcCCeEEEEEEEE
Confidence            44578999999999999999999874 3345579999999999876554211 1122 6789999999999999999999


Q ss_pred             eeCCCCCCCCC
Q psy8771         795 GTSIGDGPSSY  805 (904)
Q Consensus       795 ~~~~g~g~~s~  805 (904)
                      .|..|.|++|.
T Consensus        79 ~n~~G~s~~s~   89 (98)
T d1x5ya1          79 VNIAGRSEPAT   89 (98)
T ss_dssp             EETTEECCCCC
T ss_pred             ECCCcCCCCcC
Confidence            99999998765

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.9e-12  Score=108.71  Aligned_cols=102  Identities=26%  Similarity=0.540  Sum_probs=83.7

Q ss_pred             eecCCCCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEEEcCCCCC
Q psy8771         475 RTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTTISDLTPH  549 (904)
Q Consensus       475 ~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~  549 (904)
                      .|.+.+|..+|.++.+...+++++.|+|.+|..  .++.+.+|.|+|+.........+....   ......+.|.+|.|+
T Consensus         2 ~T~~~~P~~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~   81 (109)
T d1va9a1           2 STEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKF   81 (109)
T ss_dssp             CSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSS
T ss_pred             CCcCCCCCCCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeeeEEecCCCeeEEEECCCCcc
Confidence            466778888999999999999999999998643  456899999999987654333333222   255678999999999


Q ss_pred             CeEEEEEEEEeCCCCCCCCCcEEEecC
Q psy8771         550 TIYTIRVQAFTSVGPGPLSAPVLVKTQ  576 (904)
Q Consensus       550 t~Y~~~V~a~~~~g~~~~S~~~~~~t~  576 (904)
                      +.|.|+|+|.|..|.|++|..+.++|.
T Consensus        82 t~Y~~~V~a~n~~G~g~~S~~v~~~T~  108 (109)
T d1va9a1          82 AQYGVVVQAFNRAGTGPSSSEINATTL  108 (109)
T ss_dssp             CCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred             eEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence            999999999999999999999988874

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.35  E-value=1.4e-12  Score=106.23  Aligned_cols=87  Identities=23%  Similarity=0.387  Sum_probs=72.8

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEEE
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V~  557 (904)
                      ||.+|.++.+...+.+++.|+|.+|...++ .+.+|.|+|+..++   ..|.....  ...+.+.+.+|.+++.|.|+|+
T Consensus         1 PP~~P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~---~~~~~~~~~~~~~~~~~v~~L~~~~~Y~frV~   77 (98)
T d1x5ya1           1 PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGS---EEWVPANKEPVERCGFTVKDLPTGARILFRVV   77 (98)
T ss_dssp             CCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTC---CCCEESSSSCBSSSEEEEECCCTTCCEEEEEE
T ss_pred             CCCCCcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCc---ceeEEeeeecCceeEEEECCCcCCeEEEEEEE
Confidence            578999999999999999999999876654 79999999998764   34554433  4567899999999999999999


Q ss_pred             EEeCCCCCCCCCc
Q psy8771         558 AFTSVGPGPLSAP  570 (904)
Q Consensus       558 a~~~~g~~~~S~~  570 (904)
                      |+|..|.|++|..
T Consensus        78 A~n~~G~s~~s~~   90 (98)
T d1x5ya1          78 GVNIAGRSEPATL   90 (98)
T ss_dssp             EEETTEECCCCCC
T ss_pred             EECCCcCCCCcCC
Confidence            9999999877653

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.5e-12  Score=108.66  Aligned_cols=103  Identities=20%  Similarity=0.333  Sum_probs=80.1

Q ss_pred             eeEEecCCCCCCCCCC-cEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCC
Q psy8771         707 IPVRTKQYVPGAPPQN-VSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKW  785 (904)
Q Consensus       707 ~~~~t~~~~p~~~P~~-l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~  785 (904)
                      +.++|.+++|.. |.+ +.+..++.+++.|+|++|. +..+..+.+|.|+++......+. ........+.+.+.+|+++
T Consensus         2 v~~~T~~~~P~~-P~~~~~~~~~~~~sv~l~W~~P~-~~~g~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~   78 (107)
T d2crma1           2 VEFTTCPDKPGI-PVKPSVKGKIHSHSFKITWDPPK-DNGGATINKYVVEMAEGSNGNKW-EMIYSGATREHLCDRLNPG   78 (107)
T ss_dssp             CSCCSCCCCCCC-CCCCEEEEEEETTEEEEECCCCT-TCCSSCCCEEEEEEEESSSSCCC-EEEECSSCSEEEECSCCTT
T ss_pred             EEEECCCCCCcC-CCCCEEEeeecCCEEEEEEEECc-cCCcceEEEEEEEEEeecCCCcE-EEeecCCccEEEEeccCCC
Confidence            457788888875 555 4555678899999999884 23344789999999887654432 2222227888999999999


Q ss_pred             ceEEEEEEEeeCCCCCCCCCcEEeecC
Q psy8771         786 TEYRIWVLAGTSIGDGPSSYPITIRTH  812 (904)
Q Consensus       786 t~Y~~~V~a~~~~g~g~~s~~~~~~t~  812 (904)
                      +.|.|+|+|.|..|.|++|+++.++|.
T Consensus        79 t~Y~~rV~A~n~~G~s~~S~~v~v~Tp  105 (107)
T d2crma1          79 CFYRLRVYCISDGGQSAVSESLLVQTP  105 (107)
T ss_dssp             SCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred             CEEEEEEEEECCCcCcCCCCcEEEECC
Confidence            999999999999999999998888774

>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.34  E-value=1.1e-12  Score=107.58  Aligned_cols=88  Identities=27%  Similarity=0.430  Sum_probs=71.0

Q ss_pred             CCCeEEcCCCC-ceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC----cee--ecceEEEEeee--cCCeEEEE
Q psy8771         103 VPPQFSIPPPA-LLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD----KLP--VGRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       103 ~~P~~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~----~~~--~~~~~l~i~~l--~d~g~Y~c  173 (904)
                      .||.|...+.. ..++..|+++.|.|.+.|.|.|.|.|+++ +..+....    +..  .+.+.|.|.++  +|+|.|+|
T Consensus         2 vPP~i~~~~~~~~~t~~~G~~v~l~C~~~g~P~p~i~W~~~-g~~i~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C   80 (100)
T d1qz1a3           2 VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKD-GEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVC   80 (100)
T ss_dssp             EEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEET-TEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEE
T ss_pred             cCCEEEeCCCceeEEEcCCCCEEEEEEEEEecCCEEEEEeC-CcccccccccceeEEeecCceEEEeCCCCcccCEEEEE
Confidence            47888766553 15677899999999999999999999999 66664332    122  24578999999  69999999


Q ss_pred             EEEecCcceEEEEEEEEE
Q psy8771         174 IAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       174 ~a~n~~g~~~~~~~l~v~  191 (904)
                      .|.|..|..+..+.|.|.
T Consensus        81 ~a~N~~G~~~~~~~l~V~   98 (100)
T d1qz1a3          81 IAENKAGEQDASIHLKVF   98 (100)
T ss_dssp             EEEETTEEEEEEEEEEEE
T ss_pred             EEEECCCEEEEEEEEEEE
Confidence            999999999999999887

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=5.2e-12  Score=101.92  Aligned_cols=90  Identities=22%  Similarity=0.338  Sum_probs=78.3

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc-eEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .++|.++.+..++.+++.|+|.++   ++.+.+|.|+|+........ .........+.|.+|.|++.|.|+|+|+|..|
T Consensus         2 l~aP~n~~~~~~s~~si~l~W~~p---~~~~~~Y~i~y~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   78 (92)
T d1qg3a1           2 LGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQG   78 (92)
T ss_dssp             CCCCEEEEEEECSTTCEEEEEECC---SSCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEECSSC
T ss_pred             CCcCCCCEEEEccCCEEEEEEEec---CCCccceEEeeeeccccccEEEEecCCccEEEECCCCCCcEEEEEEEEEeCCc
Confidence            578999999999999999999986   45689999999988766653 33445567999999999999999999999999


Q ss_pred             CCCCCCCeeEEecC
Q psy8771         700 EGATTPPIPVRTKQ  713 (904)
Q Consensus       700 ~~~~s~~~~~~t~~  713 (904)
                      .|.+|..+.++|.+
T Consensus        79 ~g~~S~~~~~~T~e   92 (92)
T d1qg3a1          79 EGPYSSLVSCRTHQ   92 (92)
T ss_dssp             BCCCCCCEEEECCC
T ss_pred             CcCCCCCEEEEcCC
Confidence            99999999998864

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.6e-12  Score=108.24  Aligned_cols=94  Identities=26%  Similarity=0.484  Sum_probs=75.7

Q ss_pred             EEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCce
Q psy8771         572 LVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENI  651 (904)
Q Consensus       572 ~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~  651 (904)
                      .++|..+.|.+|.++++..++.+++.|+|.++..                                         .++.+
T Consensus         3 ~v~T~e~vP~~p~~l~~~~~~~~sv~l~W~~P~~-----------------------------------------~ng~i   41 (106)
T d1wfna1           3 LVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGE-----------------------------------------KNGIL   41 (106)
T ss_dssp             SCCSSCCSCCCCSCCEEESCCSSEEEEECCCCTT-----------------------------------------CCSCC
T ss_pred             EEEcCCCCCcCCCCcEEEEecCCEEEEEEECCCC-----------------------------------------CCCcE
Confidence            3567777888888898888888888888887765                                         56778


Q ss_pred             eeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCC
Q psy8771         652 ISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP  706 (904)
Q Consensus       652 ~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~  706 (904)
                      .+|.|+|+..+....  .........++.|.+|.|++.|.|+|+|+|..|.|.+|..
T Consensus        42 ~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~   98 (106)
T d1wfna1          42 TGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAS   98 (106)
T ss_dssp             CEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCEEEEEEEEECSSCEEEEEEE
T ss_pred             EeEEEEEEECCCCcceEEEecCCCeeEEEEccCCCCCEEEEEEEEECCCCCcCCcCC
Confidence            899999988765543  3344455679999999999999999999999999887743

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=6e-12  Score=101.18  Aligned_cols=90  Identities=19%  Similarity=0.408  Sum_probs=75.5

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCC-CCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPE-TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      |+.+|.+|++...+.++|.|+|.+|. ..++.+.+|.|++...+.    .+..  ....+++.|.+|.|++.|.|+|+|+
T Consensus         2 ~p~~p~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~----~~~~--~~~~t~~~i~~L~p~t~Y~~rV~A~   75 (94)
T d1x5aa1           2 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE----EWHQ--MVLEPRVLLTKLQPDTTYIVRVRTL   75 (94)
T ss_dssp             CCCCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC----EEEE--EESSSEEEEESCCSSCEEEEEEEEE
T ss_pred             cCCCCCceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCc----eEEE--eeccCEEEECCCCCCCEEEEEEEEE
Confidence            56788899999999999999999974 344567799999998752    2222  2356789999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecC
Q psy8771         560 TSVGPGPLSAPVLVKTQ  576 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~  576 (904)
                      |..|.|++|....++|.
T Consensus        76 n~~G~g~~S~~~~~~T~   92 (94)
T d1x5aa1          76 TPLGPGPFSPDHEFRTS   92 (94)
T ss_dssp             CSSSCCCCCCCEEEECC
T ss_pred             cCCcCcCCCCCEEEEeC
Confidence            99999999999999984

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3.9e-12  Score=104.51  Aligned_cols=95  Identities=20%  Similarity=0.255  Sum_probs=75.5

Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCc-cEEEEEEEEEEccCCCCccEEEEec---CcceEEecCCCCCceEEE
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNG-HIVYYKLQFVETGRSDSEASIVTLK---NQTSFVLDELKKWTEYRI  790 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g-~~~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t~Y~~  790 (904)
                      +|. +|..+.+ ....+++.|+|++|.  ..+| +|.+|.|+|+..+...+........   ..+.++|.+|.+++.|.|
T Consensus         2 vP~-~P~~~~~-~~~~~sv~l~W~~P~--~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~f   77 (101)
T d2haza1           2 TPS-SPSIDQV-EPYSSTAQVQFDEPE--ATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAV   77 (101)
T ss_dssp             CCC-CCEEEEE-EECSSCEEEEEECCS--CCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEE
T ss_pred             cCc-CCccCEE-EeeCCEEEEEEeCCC--cCccccEEEEEEEEeecCCcceeeeeeeeecccceeEEEecCCCCCeEEEE
Confidence            465 4665554 457789999999984  3444 6999999999987665544444433   567899999999999999


Q ss_pred             EEEEeeCCCCCCCCCcEEeecCC
Q psy8771         791 WVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       791 ~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      +|+|.|..|.|++|..+.++|.+
T Consensus        78 rV~A~N~~G~g~~S~~~~~~T~P  100 (101)
T d2haza1          78 RLAALNGKGLGEISAASEFKTQP  100 (101)
T ss_dssp             EEEEEETTEECCCCCCEEEECCC
T ss_pred             EEEEEeCCcCcCCCCceeEEeCC
Confidence            99999999999999999999865

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=6.2e-12  Score=104.45  Aligned_cols=89  Identities=21%  Similarity=0.380  Sum_probs=73.6

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE---eecCceEEEEcCCCCCCeEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ---VVDNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      .||.+|.++.+..++.+++.|+|.++.+.++.|.+|.|+|+.....  ..|...   .......+.+.+|.|++.|.|+|
T Consensus         9 ~pP~~P~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV   86 (108)
T d1x4za1           9 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKV--GDWILATSAIPPSRLSVEITGLEKGISYKFRV   86 (108)
T ss_dssp             CCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSC--CCCEEEEEEECTTCCEEEEESCCTTCEEEEEE
T ss_pred             CCCccCCCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCC--CceEEEEEeecCCccEEEECCCCCCCEEEEEE
Confidence            5678899999999999999999998877667899999999986643  234332   22567789999999999999999


Q ss_pred             EEEeCCCCCCCCCc
Q psy8771         557 QAFTSVGPGPLSAP  570 (904)
Q Consensus       557 ~a~~~~g~~~~S~~  570 (904)
                      +|+|..|.|.+|.+
T Consensus        87 ~A~N~~G~s~~S~p  100 (108)
T d1x4za1          87 RALNMLGESEPSAP  100 (108)
T ss_dssp             EEEETTEECCCCCC
T ss_pred             EEECCCcCCCCCCC
Confidence            99999999887764

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=5.6e-12  Score=106.86  Aligned_cols=107  Identities=21%  Similarity=0.302  Sum_probs=83.8

Q ss_pred             CCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771         563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS  642 (904)
Q Consensus       563 g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~  642 (904)
                      |.|..|..+.++|...+|..|..+.+...+.+++.|.|+++..                                     
T Consensus         1 G~s~~S~~v~v~T~~~~P~~pp~~~~~~~~~~~i~v~W~~~~~-------------------------------------   43 (117)
T d1wj3a_           1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKA-------------------------------------   43 (117)
T ss_dssp             CCCCCCCCCCCCCSCCCCCCCCCSCBCCEETTEEEEECCCCCC-------------------------------------
T ss_pred             CcCCCCCCEEEEcCCCCcCCCCcceEEeecCCEEEEEEeeccc-------------------------------------
Confidence            5678899999999999997655555566678899999997532                                     


Q ss_pred             CCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEE
Q psy8771         643 KPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVR  710 (904)
Q Consensus       643 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~  710 (904)
                        ...++.+.+|+|+|+..+......  ......+.+.+|.+++.|.|+|+|+|..|.|.+|..+.+.
T Consensus        44 --~~~~g~i~~Y~v~y~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~  107 (117)
T d1wj3a_          44 --MENESEVTGYKVFYRTSSQNNVQV--LNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIP  107 (117)
T ss_dssp             --CSSSCCEEEEEEEEEESSCSSCEE--EEESSSEEEEECCCSSCEEEEEEEEESSCCCCBCCCEEEC
T ss_pred             --ccCCCceeEEEEEEEecCCCceee--eeceeeEEEeeccCCcEEEEEEEEEcCCccCCCCCCEEEe
Confidence              125678999999998876554432  2334567788999999999999999999999999887663

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=3e-12  Score=103.36  Aligned_cols=91  Identities=16%  Similarity=0.195  Sum_probs=78.0

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccce-EEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHH-RRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      |.+|.++.+...+.+++.|+|.++.++++++.+|.|+|+..++..... .......++.|.+|.|++.|.|+|+|+|..|
T Consensus         1 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~N~~G   80 (93)
T d2vkwa2           1 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQG   80 (93)
T ss_dssp             CCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CCCCccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeeeccCCceEEEEeccccceEEEEEEEEEcCCC
Confidence            568999999999999999999999888889999999999887654433 3445667999999999999999999999999


Q ss_pred             CCCCCCCeeEEec
Q psy8771         700 EGATTPPIPVRTK  712 (904)
Q Consensus       700 ~~~~s~~~~~~t~  712 (904)
                      .|.++. +.++|.
T Consensus        81 ~s~ps~-~~~~T~   92 (93)
T d2vkwa2          81 KSKAAH-FVFRTA   92 (93)
T ss_dssp             ECCCEE-EEEECC
T ss_pred             CcCCEe-EEEEec
Confidence            998874 667663

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=4.7e-12  Score=105.49  Aligned_cols=100  Identities=24%  Similarity=0.397  Sum_probs=79.2

Q ss_pred             eeeecCCCCCCCCCC-eEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCC
Q psy8771         473 PVRTKQYEPGTAPRD-VQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHT  550 (904)
Q Consensus       473 ~~~t~~~~p~~~p~~-l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t  550 (904)
                      .++|..+.| .+|.+ +.+..++.+++.|+|++|...++ .+.+|.|+++.....  ..|........+.+.+.+|+|++
T Consensus         3 ~~~T~~~~P-~~P~~~~~~~~~~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t   79 (107)
T d2crma1           3 EFTTCPDKP-GIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG--NKWEMIYSGATREHLCDRLNPGC   79 (107)
T ss_dssp             SCCSCCCCC-CCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSS--CCCEEEECSSCSEEEECSCCTTS
T ss_pred             EEECCCCCC-cCCCCCEEEeeecCCEEEEEEEECccCCcceEEEEEEEEEeecCC--CcEEEeecCCccEEEEeccCCCC
Confidence            455666665 56666 44456788999999999876655 789999999877643  44555555777889999999999


Q ss_pred             eEEEEEEEEeCCCCCCCCCcEEEec
Q psy8771         551 IYTIRVQAFTSVGPGPLSAPVLVKT  575 (904)
Q Consensus       551 ~Y~~~V~a~~~~g~~~~S~~~~~~t  575 (904)
                      .|.|+|+|+|..|.|++|+.+.++|
T Consensus        80 ~Y~~rV~A~n~~G~s~~S~~v~v~T  104 (107)
T d2crma1          80 FYRLRVYCISDGGQSAVSESLLVQT  104 (107)
T ss_dssp             CEEEEEEEEETTEECCCCCCCCCCC
T ss_pred             EEEEEEEEECCCcCcCCCCcEEEEC
Confidence            9999999999999999998877766

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=9.5e-13  Score=109.68  Aligned_cols=104  Identities=18%  Similarity=0.296  Sum_probs=77.0

Q ss_pred             CCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCC
Q psy8771         705 PPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELK  783 (904)
Q Consensus       705 ~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~  783 (904)
                      ..+.+++.+.+|.. |. +.+...+.++|.|+|++|  .+.++++.+|.|+|+..++..+ ....... ..+.++|.+|.
T Consensus         3 ~~l~v~~~P~~P~~-p~-~~~~~~~~~sv~l~W~~P--~~~~~~I~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~   77 (108)
T d1wf5a1           3 AHLRVRQLPHAPEH-PV-ATLSTVERRAINLTWTKP--FDGNSPLIRYILEMSENNAPWT-VLLASVDPKATSVTVKGLV   77 (108)
T ss_dssp             CCSSCCCCCCCCSS-CE-EEECSSSTTEEEEECCCC--CCCSSCEEEEEEEEECTTCCCE-EEESSCCTTCCEEEEESCC
T ss_pred             cccEEecCCCCCCC-CE-EEEEeccCCEEEEEEECC--CCCCCccEEEEEEEEeccCCce-EEeeeecCCccEEEECCCC
Confidence            34556665554442 22 445567889999999998  3567899999999997665322 2222223 67889999999


Q ss_pred             CCceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         784 KWTEYRIWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       784 p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      +++.|.|+|+|.|..|.|++|.++...|.+
T Consensus        78 p~t~Y~frV~A~N~~G~s~~S~~~~~~t~P  107 (108)
T d1wf5a1          78 PARSYQFRLCAVNDVGKGQFSKDTERVSLP  107 (108)
T ss_dssp             TTCEEEEEEEEEESSCEEEECCCCSCEECC
T ss_pred             CCCEEEEEEEEEcCCcCCCCcCCcCCEECC
Confidence            999999999999999999998877666643

>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Perlecan Ig3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=5.9e-12  Score=100.69  Aligned_cols=80  Identities=18%  Similarity=0.308  Sum_probs=66.7

Q ss_pred             cCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEE
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETS  185 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~  185 (904)
                      ..|.. +.+.+|+++.|.|.+. |.|.|.|.|+|+ +..+... +....++.|.|.++  +|+|.|+|.|.|..|..+..
T Consensus         7 ~~p~~-~~v~~G~~~~l~C~~~~~~p~~~v~W~k~-~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~   83 (89)
T d1gl4b_           7 EEQRS-QSVRPGADVTFICTAKSKSPAYTLVWTRL-HNGKLPS-RAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGT   83 (89)
T ss_dssp             CSCCE-EEECTTCCEEEEEEEEESSSCCEEEEEEG-GGBCCCT-TEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred             cCCCe-EEEeCCCcEEEEEEccCCCCCCEEEEecC-Cceeecc-ccEeeceEEEEecCCcccCEEEEEEEEECCCEEEEE
Confidence            34555 8999999999999997 688899999999 5555443 34456789999999  69999999999999999998


Q ss_pred             EEEEEE
Q psy8771         186 TIVKVQ  191 (904)
Q Consensus       186 ~~l~v~  191 (904)
                      +.|.|+
T Consensus        84 ~~l~V~   89 (89)
T d1gl4b_          84 ATLHVQ   89 (89)
T ss_dssp             EEEEEC
T ss_pred             EEEEEC
Confidence            888874

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=2.6e-12  Score=109.65  Aligned_cols=100  Identities=16%  Similarity=0.252  Sum_probs=80.1

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCC-CCCCcceEEEeecCceEEEEcCCCCCCeEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQ-SLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~  557 (904)
                      .|+.+|.++.+..++.++|.|+|++|.+.++ .+.+|.|+|+... +.....|........+.+.+.+|.|++.|.|+|+
T Consensus        14 ~pp~~P~~p~v~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~   93 (120)
T d1wfua_          14 VPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLK   93 (120)
T ss_dssp             CCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEEE
T ss_pred             cCCCcCCCCEEeEecCCEEEEEEECCcccCcccccceeeeeeeecccccccceeeeccccccEEeCCCCCCCcEeeEEEE
Confidence            5667888888888999999999999876554 5777777776421 2233567666667778899999999999999999


Q ss_pred             EEeCCCCCCCCCcEEEecCCCC
Q psy8771         558 AFTSVGPGPLSAPVLVKTQQGV  579 (904)
Q Consensus       558 a~~~~g~~~~S~~~~~~t~~~~  579 (904)
                      |+|..|.|.+|..+.+.|....
T Consensus        94 A~n~~G~s~~S~~~~~~T~~~~  115 (120)
T d1wfua_          94 VTSPSGEYEYSPVVSVATTRES  115 (120)
T ss_dssp             EECSSSCEEECCCEEEECCCCC
T ss_pred             EEeCCcEeCCCCCEEEEeCCCC
Confidence            9999999999999999886543

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=7.6e-12  Score=103.89  Aligned_cols=89  Identities=19%  Similarity=0.319  Sum_probs=71.7

Q ss_pred             CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC-CccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771         716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD-SEASIVTLK-NQTSFVLDELKKWTEYRIWVL  793 (904)
Q Consensus       716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~  793 (904)
                      |+.+|.++.+..++.+++.|+|.++  ...+++|.+|.|+|+..+... +......+. ....+++.+|.+++.|.|+|+
T Consensus        10 pP~~P~~~~v~~~~~~sv~l~W~p~--~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~   87 (108)
T d1x4za1          10 PPEAPDRPTISTASETSVYVTWIPR--GNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVR   87 (108)
T ss_dssp             CCCCCCCCEEEECCSSEEEEECCCC--CCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEEE
T ss_pred             CCccCCCCEEEEccCCEEEEEEECC--CCCCCccEEEEEEEEecCCCCceEEEEEeecCCccEEEECCCCCCCEEEEEEE
Confidence            4446889999999999999999866  455678999999999876543 323333344 778999999999999999999


Q ss_pred             EeeCCCCCCCCCc
Q psy8771         794 AGTSIGDGPSSYP  806 (904)
Q Consensus       794 a~~~~g~g~~s~~  806 (904)
                      |.|..|.|++|.+
T Consensus        88 A~N~~G~s~~S~p  100 (108)
T d1x4za1          88 ALNMLGESEPSAP  100 (108)
T ss_dssp             EEETTEECCCCCC
T ss_pred             EECCCcCCCCCCC
Confidence            9999999888763

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=6.5e-12  Score=101.31  Aligned_cols=91  Identities=15%  Similarity=0.121  Sum_probs=75.0

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      |.+|.++.+...+.+++.|+|.+|.+.++++.+|.|+|+..++...  .........+++.+.+|.|++.|.|+|+|+|.
T Consensus         1 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~N~   78 (93)
T d2vkwa2           1 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWK--PEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQ   78 (93)
T ss_dssp             CCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCC--CCEEECTTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCccee--eeeeccCCceEEEEeccccceEEEEEEEEEcC
Confidence            3688999999999999999999998877899999999998764321  11233467788999999999999999999999


Q ss_pred             CCCCCCCCcEEEec
Q psy8771         562 VGPGPLSAPVLVKT  575 (904)
Q Consensus       562 ~g~~~~S~~~~~~t  575 (904)
                      .|.|..|. +.++|
T Consensus        79 ~G~s~ps~-~~~~T   91 (93)
T d2vkwa2          79 QGKSKAAH-FVFRT   91 (93)
T ss_dssp             TEECCCEE-EEEEC
T ss_pred             CCCcCCEe-EEEEe
Confidence            99988775 55655

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.30  E-value=6.6e-12  Score=101.89  Aligned_cols=87  Identities=22%  Similarity=0.437  Sum_probs=71.3

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCC-CCCceeeEEEEEEeCCCCCCcceEEE--eecCceEEEEcCCCCCCeEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPET-PNGQITGYKVYYTQDQSLPMSAWETQ--VVDNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~-~~~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      .|..+|.++.+..++.++|.|+|++|.. .++.+.+|.|+|+..+..  ..|...  .....+++.|.+|+|++.|.|+|
T Consensus         5 ~P~~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   82 (95)
T d2ibga1           5 DPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSA--GEYFKATIEGAHARSFKIAPLETATMYEFKL   82 (95)
T ss_dssp             CCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCC--SCCEEEEEECTTCCEEEECSCCTTCEEEEEE
T ss_pred             CCCCCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeec--ceeeeeeccCCceeEEEEeeccCCeEEEEEE
Confidence            4666889999999999999999998654 445799999999987643  233333  33667889999999999999999


Q ss_pred             EEEeCCCCCCCC
Q psy8771         557 QAFTSVGPGPLS  568 (904)
Q Consensus       557 ~a~~~~g~~~~S  568 (904)
                      +|+|..|.|++|
T Consensus        83 ~A~n~~G~s~~S   94 (95)
T d2ibga1          83 QSFSAASASEFS   94 (95)
T ss_dssp             EEECSSCBCCCC
T ss_pred             EEEeCCccCCCC
Confidence            999999999887

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=8.2e-12  Score=101.14  Aligned_cols=83  Identities=18%  Similarity=0.264  Sum_probs=71.9

Q ss_pred             eeccceEEEeccCCCCCCC-ceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeE
Q psy8771         631 DIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPV  709 (904)
Q Consensus       631 ~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~  709 (904)
                      ..+.++++|+|.++...++ .+.+|.|+|+..+...+.........+++|.+|.+++.|.|+|+|+|..|.|.+|+...+
T Consensus        13 ~~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~   92 (97)
T d2crza1          13 RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDI   92 (97)
T ss_dssp             CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEE
T ss_pred             eeeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEeecCCceEEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeE
Confidence            4567899999998866554 799999999998877776666667789999999999999999999999999999999988


Q ss_pred             EecC
Q psy8771         710 RTKQ  713 (904)
Q Consensus       710 ~t~~  713 (904)
                      +|.+
T Consensus        93 ~T~p   96 (97)
T d2crza1          93 TTAP   96 (97)
T ss_dssp             ECCC
T ss_pred             EeCc
Confidence            8863

>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Mucosal addressin cell adhesion molecule-1 (MADCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.2e-11  Score=98.21  Aligned_cols=85  Identities=21%  Similarity=0.343  Sum_probs=67.4

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      |.+..+|...+.+.+|+++.|.|.+. |.|.|.|+|+++ +..+. ..+.....+.|.|.++  +|+|.|+|.|.|..|.
T Consensus         3 P~~i~~p~~~~~~~~G~~~~l~C~~~~g~p~p~v~W~~~-~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~Asn~~g~   80 (90)
T d1gsma1           3 PLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGL-DTSLG-AVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT   80 (90)
T ss_dssp             SEEEESCCSEEEEETTCCEEEEEEECCSSTTCEEEEESS-TTTTC-CEEEESSEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred             CcEEeCCCCeEEEEeCCcEEEEEEecCCCCccEEEEEEe-eeeee-eeeccCceeeEEcCccChhhCCcEEEEEEeCCCc
Confidence            44445555448899999999999885 899999999997 44442 1223335678999999  6999999999999999


Q ss_pred             eEEEEEEEEE
Q psy8771         182 IETSTIVKVQ  191 (904)
Q Consensus       182 ~~~~~~l~v~  191 (904)
                      .+.++.|.|.
T Consensus        81 ~~~s~~l~Vy   90 (90)
T d1gsma1          81 FQHTVQLLVY   90 (90)
T ss_dssp             EEEEEEEEEE
T ss_pred             EEEEEEEEEC
Confidence            9999988873

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=8.3e-12  Score=101.83  Aligned_cols=93  Identities=18%  Similarity=0.255  Sum_probs=75.1

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      .+|.++.+..++.++|.|+|++|...++ .+..|.++++.....  ..+........+++.+.+|++++.|.|+|+|+|.
T Consensus         2 ~~P~~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~~rV~A~n~   79 (96)
T d1x5xa1           2 SMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSG--YGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNS   79 (96)
T ss_dssp             CCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSS--CCCEEEEEESCSEEEEESCCSSCEEEEEEEEECS
T ss_pred             ccCCCCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccce--eeeEEeecCCCCEEEECCCCCCCEEEEEEEEEcC
Confidence            5778899999999999999999876665 677788887765532  2222333466778999999999999999999999


Q ss_pred             CCCCCCCCcEEEecCC
Q psy8771         562 VGPGPLSAPVLVKTQQ  577 (904)
Q Consensus       562 ~g~~~~S~~~~~~t~~  577 (904)
                      .|.|.+|..+.++|.+
T Consensus        80 ~G~s~~S~~~~~~T~p   95 (96)
T d1x5xa1          80 EGKSNPSEVVEFTTCP   95 (96)
T ss_dssp             SCEEEECCCEEEECCC
T ss_pred             CcEeCCCCCEEEEeCc
Confidence            9999999999988853

>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: NT3 binding domain of trkC receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=7.7e-12  Score=103.39  Aligned_cols=93  Identities=20%  Similarity=0.266  Sum_probs=71.7

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--------cceEEEEeee--cCCeE
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--------GRNVLTLDRV--TESEN  170 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--------~~~~l~i~~l--~d~g~  170 (904)
                      +..||+|+.....    ..+....|.|.+.|.|.|.|+|+|+ +..+..+.++..        ....|.|.++  +|+|.
T Consensus         2 V~~PP~i~~~~~~----~~~~~~~i~~~v~G~P~P~v~W~~n-~~~i~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~   76 (105)
T d1wwca_           2 VYYPPRVVSLEEP----ELRLEHCIEFVVRGNPPPTLHWLHN-GQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGN   76 (105)
T ss_dssp             CCCCCCCCCCCCC----CCCCEEEEEEEEECSSCCEEEEEET-TEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred             EEcCCeeEEeCCC----EEEEEEEEEEEEEEeCCCeEEEEeC-ccccCCCcceeeeEEeecccceEEEEEeecccccceE
Confidence            4678888654432    2334456888999999999999999 777766655432        2346999998  69999


Q ss_pred             EEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCc
Q psy8771         171 YTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPL  205 (904)
Q Consensus       171 Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~  205 (904)
                      |+|.|.|..|..++++.|.|.       ..|.|+.
T Consensus        77 Y~C~a~N~~G~~~~~~~v~V~-------~~P~P~~  104 (105)
T d1wwca_          77 YTLIAKNPLGTANQTINGHFL-------KEPFPVD  104 (105)
T ss_dssp             EEEEEEETTEEEEEEEEECCS-------CCCCCSC
T ss_pred             EEEEEEcCCCEEEEEEEEEEE-------eCCCCCC
Confidence            999999999999999999888       7776653

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=3.2e-12  Score=105.40  Aligned_cols=101  Identities=19%  Similarity=0.277  Sum_probs=82.3

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  700 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~  700 (904)
                      |.+|.+|++.+++.+++.|+|.++.   +.+.+|.|.|...++........+...++.|.||.|++.|.|+|+|++..|.
T Consensus         1 P~~P~~l~~~~~t~~si~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~~~   77 (102)
T d2cuha1           1 PDGPTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNL   77 (102)
T ss_dssp             CSSCEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSSCCEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTEE
T ss_pred             CcCCCccEEEEeCCCEEEEEEEeee---ccceeeEEEEEeccccceeeeeeeeeeeEEEccEEeeEEEEEEEEEEeCCCC
Confidence            4689999999999999999999853   5689999999987766665566667789999999999999999999999888


Q ss_pred             CCCCCCeeEEecCCCCCCCCCCcEEEecC
Q psy8771         701 GATTPPIPVRTKQYVPGAPPQNVSCEPLS  729 (904)
Q Consensus       701 ~~~s~~~~~~t~~~~p~~~P~~l~~~~~~  729 (904)
                      |.++ .+.++|...    +|.+|.+..++
T Consensus        78 s~~~-~~~~~T~~~----~P~~l~~~~vt  101 (102)
T d2cuha1          78 TSPA-SITFTTGLE----APRDLEAKEVT  101 (102)
T ss_dssp             CCCE-EEEEESCCC----CTTTSSSCCCC
T ss_pred             cCCE-EEEEECCCC----CCCCCEeecCC
Confidence            7665 456676543    56777766543

>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.29  E-value=3.2e-12  Score=102.60  Aligned_cols=85  Identities=16%  Similarity=0.244  Sum_probs=68.6

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC--Ccee-ecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD--DKLP-VGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      +.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|+|+|+ +..+...  .++. ..+++|.|.++  +|+|.|+|.|.|..
T Consensus         2 ~~F~~~P~~-~~v~~G~~~~l~C~v~g~p~p~v~W~~~-~~~i~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~   79 (92)
T d1epfa2           2 LMFKNAPTP-QEFKEGEDAVIVCDVVSSLPPTIIWKHK-GRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILA   79 (92)
T ss_dssp             SEEEECCSS-EECCTTSCEEECCEEECSSCCEEEEEET-TEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGG
T ss_pred             cEEEEcCCC-EEEeCCCcEEEEEEEeecCCCeEEEEEc-CcccccccceeeeeeeeeeEEECCCCHHhCEEEEEEEEECc
Confidence            567788888 9999999999999999999999999999 5444332  2333 35678999999  69999999999988


Q ss_pred             cceEEEEEEEEE
Q psy8771         180 GVIETSTIVKVQ  191 (904)
Q Consensus       180 g~~~~~~~l~v~  191 (904)
                      |.......+.|.
T Consensus        80 ~~~~~~~~i~Vi   91 (92)
T d1epfa2          80 RGEINFKDIQVI   91 (92)
T ss_dssp             GTEEEEEEEEEE
T ss_pred             CCEEEEEEEEEE
Confidence            876666666553

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=99.29  E-value=1.1e-11  Score=102.71  Aligned_cols=96  Identities=22%  Similarity=0.266  Sum_probs=77.4

Q ss_pred             CCCCCCCCCeEEEecCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEe--ecCceEEEEcCCCCCCeEEE
Q psy8771         479 YEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQV--VDNNQLTTISDLTPHTIYTI  554 (904)
Q Consensus       479 ~~p~~~p~~l~v~~~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~  554 (904)
                      ++|..+|.++++...+.++|.|+|+++  ...+|.+.+|.|.|+..+..  ..|....  ....+++.|.+|.+++.|.|
T Consensus         2 ~~P~~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~   79 (105)
T d1cfba2           2 DVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPA--AAWENNNIFDWRQNNIVIADQPTFVKYLI   79 (105)
T ss_dssp             CCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTT--CCCEEEEECCTTCCEEEECSCCSSCEEEE
T ss_pred             CCCCCCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccc--cceeEEEecCCCccEEEECCCCCCCEEEE
Confidence            467788999999999999999999973  45678999999999987644  3344333  35677899999999999999


Q ss_pred             EEEEEeCCCCCCCCCcE-EEecC
Q psy8771         555 RVQAFTSVGPGPLSAPV-LVKTQ  576 (904)
Q Consensus       555 ~V~a~~~~g~~~~S~~~-~~~t~  576 (904)
                      +|+|+|..|.|+.|... ...+.
T Consensus        80 ~V~A~N~~G~gp~S~~~v~~~t~  102 (105)
T d1cfba2          80 KVVAINDRGESNVAAEEVVGYSG  102 (105)
T ss_dssp             EEEEEETTEECSSCCCCEEEESS
T ss_pred             EEEEEeCCcCCCCCCCcEeEcCC
Confidence            99999999999888654 33443

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=8.1e-12  Score=103.89  Aligned_cols=89  Identities=19%  Similarity=0.400  Sum_probs=69.7

Q ss_pred             CCCCC--eEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEEEcCCCCCCeEEEEEE
Q psy8771         483 TAPRD--VQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       483 ~~p~~--l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V~  557 (904)
                      .+|.+  +.+...+.+++.|+|.+|.+.++.+.+|.|+|+..++    .|....   ....+.+.+.+|.|++.|.|+|+
T Consensus        12 ~~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~----~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~   87 (108)
T d1wf5a1          12 HAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNA----PWTVLLASVDPKATSVTVKGLVPARSYQFRLC   87 (108)
T ss_dssp             CCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTC----CCEEEESSCCTTCCEEEEESCCTTCEEEEEEE
T ss_pred             CCCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccC----CceEEeeeecCCccEEEECCCCCCCEEEEEEE
Confidence            44444  4445677889999999998777799999999998653    233322   24567899999999999999999


Q ss_pred             EEeCCCCCCCCCcEEEec
Q psy8771         558 AFTSVGPGPLSAPVLVKT  575 (904)
Q Consensus       558 a~~~~g~~~~S~~~~~~t  575 (904)
                      |+|..|.|.+|......|
T Consensus        88 A~N~~G~s~~S~~~~~~t  105 (108)
T d1wf5a1          88 AVNDVGKGQFSKDTERVS  105 (108)
T ss_dssp             EEESSCEEEECCCCSCEE
T ss_pred             EEcCCcCCCCcCCcCCEE
Confidence            999999998887765555

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2.2e-11  Score=105.09  Aligned_cols=105  Identities=22%  Similarity=0.308  Sum_probs=83.9

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      |.+|.++.+..++.++|.|+|+++.+.++.+..|.++|+.........+..........+.+.+|.+++.|.|+|+|+|.
T Consensus        17 P~~P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~   96 (127)
T d1ueya_          17 PNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNS   96 (127)
T ss_dssp             CCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCEEEECCCTTCEECCEEEEEES
T ss_pred             CcCCCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEeecCCceEEEECCCccCCEEEEEEEEEcC
Confidence            47899999999999999999999988888999999999987654433333334466777899999999999999999999


Q ss_pred             CCCCCCCCcE-EEecCCCCCC-CCCCc
Q psy8771         562 VGPGPLSAPV-LVKTQQGVPS-QPRDL  586 (904)
Q Consensus       562 ~g~~~~S~~~-~~~t~~~~p~-~p~~~  586 (904)
                      .|.|.+|... .+.|....|. +|.++
T Consensus        97 ~G~s~~S~~s~~~~t~~~~P~~~P~~~  123 (127)
T d1ueya_          97 IGKSLPSEASEQYLTKASEPDKNPTSG  123 (127)
T ss_dssp             SCBCCCCSCCCCEECCCSSCSSCSSCC
T ss_pred             CcCcCCcCCcccEEcCCCCCCCCCCCC
Confidence            9999888764 4566666653 55544

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.6e-11  Score=106.06  Aligned_cols=106  Identities=22%  Similarity=0.331  Sum_probs=84.1

Q ss_pred             CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEE
Q psy8771         578 GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY  657 (904)
Q Consensus       578 ~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~  657 (904)
                      +.|.+|.++++..++.+++.|+|.++.+                                         .++.+..|.++
T Consensus        15 d~P~~P~~~~v~~~~~~sv~l~W~~p~~-----------------------------------------~~~~i~~~~~~   53 (127)
T d1ueya_          15 DVPNPPFDLELTDQLDKSVQLSWTPGDD-----------------------------------------NNSPITKFIIE   53 (127)
T ss_dssp             CSCCCCEEEEEECCSSSCEEEEEECCCC-----------------------------------------CSSCEEEEEEE
T ss_pred             ccCcCCCCcEEEEecCCeEEEEEeCCcc-----------------------------------------cccceEeeeee
Confidence            4678888999988899999999988765                                         56678888888


Q ss_pred             EEeCCcccc---ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCC-eeEEecCCCCCCCCCCcE
Q psy8771         658 WNDTYAKAK---HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYVPGAPPQNVS  724 (904)
Q Consensus       658 ~~~~~~~~~---~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~-~~~~t~~~~p~~~P~~l~  724 (904)
                      |+.......   ..........+.+.+|++++.|.|+|+|+|..|.|.+|.. ..++|.+..|..+|.++.
T Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~~P~~~P~~~p  124 (127)
T d1ueya_          54 YEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGP  124 (127)
T ss_dssp             EEBTTTCTTCEEEEEEEESSCCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCC
T ss_pred             eccccccceeEEEEeecCCceEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCCCCCCCCCCCC
Confidence            887654443   2223345568999999999999999999999999988865 457788888888887654

>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor receptor TrkA, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: High affinity nerve growth factor receptor TrkA, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=5.5e-13  Score=107.34  Aligned_cols=85  Identities=25%  Similarity=0.309  Sum_probs=69.9

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCce--eecceEEEEeee--cCCe-EEEEEEEec
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKL--PVGRNVLTLDRV--TESE-NYTCIAASV  178 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~--~~~~~~l~i~~l--~d~g-~Y~c~a~n~  178 (904)
                      .|.|...+.+ ..+.+|+++.|.|.+.|.|.|.|+|+++ +..+....+.  ......|.|.++  +|.| .|+|.|.|.
T Consensus         2 ~P~i~~~~~~-~~v~~G~~v~l~C~~~g~P~p~v~W~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~N~   79 (92)
T d2ifga1           2 VPTLKVQVPN-ASVDVGDDVLLRCQVEGRGLEQAGWILT-ELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAEND   79 (92)
T ss_dssp             CCEEEEECCS-SCCBTTCCEEEEEEEECSSCCCCCEEES-CCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEET
T ss_pred             CCEEEEeCCC-EEEeCCCEEEEeeeccCCCCcEEEEEEC-CceeeeeeeeeeeccceeEEEccccccccceEEEEEEEcC
Confidence            5888888888 8999999999999999999999999999 5554432222  235678999999  6888 699999999


Q ss_pred             CcceEEEEEEEE
Q psy8771         179 LGVIETSTIVKV  190 (904)
Q Consensus       179 ~g~~~~~~~l~v  190 (904)
                      .|..+.++.|.|
T Consensus        80 ~G~~~~s~~l~V   91 (92)
T d2ifga1          80 VGRAEVSVQVNV   91 (92)
T ss_dssp             TEECCEEECCCC
T ss_pred             CCEEEEEEEEEE
Confidence            999888877765

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=99.28  E-value=6.2e-12  Score=103.17  Aligned_cols=90  Identities=23%  Similarity=0.343  Sum_probs=72.6

Q ss_pred             CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEE
Q psy8771         714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWV  792 (904)
Q Consensus       714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V  792 (904)
                      ++|. +|.++.+.. ..+++.|+|+++  .+.++++.+|.|+|+......+........ ..+++.+.+|.|++.|.|+|
T Consensus         4 dvP~-~P~~~~v~~-~~~sv~lsW~pp--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~frV   79 (100)
T d1cfba1           4 DVPN-APKLTGITC-QADKAEIHWEQQ--GDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRV   79 (100)
T ss_dssp             CCCC-CCEEEEEEE-CSSEEEEEEECC--CCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEEECCSSEEEEEEE
T ss_pred             cCCC-cCcCcEEEE-cCCEEEEEEcCC--cccccceEEEEEEEecCCCCceeeEEeeecCCceEEEEecCCCCCEEEEEE
Confidence            4565 789999865 678999999988  456789999999999876655444433333 77889999999999999999


Q ss_pred             EEeeCCCCCCCCCcE
Q psy8771         793 LAGTSIGDGPSSYPI  807 (904)
Q Consensus       793 ~a~~~~g~g~~s~~~  807 (904)
                      +|.|..|.|++|++.
T Consensus        80 ~A~n~~G~g~~S~~s   94 (100)
T d1cfba1          80 IAFNKIGASPPSAHS   94 (100)
T ss_dssp             EEEETTEECCCCCCC
T ss_pred             EEEeCCcCCCCcCCC
Confidence            999999999988754

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=99.28  E-value=7.1e-12  Score=102.82  Aligned_cols=89  Identities=21%  Similarity=0.353  Sum_probs=71.6

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      |.+|.++.+.. ..+++.|+|++|.+.++.+.+|.|+|+...................++.+.+|.|++.|.|+|+|.|.
T Consensus         6 P~~P~~~~v~~-~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~frV~A~n~   84 (100)
T d1cfba1           6 PNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNK   84 (100)
T ss_dssp             CCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEEECCSSEEEEEEEEEEET
T ss_pred             CCcCcCcEEEE-cCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeecCCceEEEEecCCCCCEEEEEEEEEeC
Confidence            47999999864 66899999999988888999999999987654332222333356677899999999999999999999


Q ss_pred             CCCCCCCCcE
Q psy8771         562 VGPGPLSAPV  571 (904)
Q Consensus       562 ~g~~~~S~~~  571 (904)
                      .|.|++|...
T Consensus        85 ~G~g~~S~~s   94 (100)
T d1cfba1          85 IGASPPSAHS   94 (100)
T ss_dssp             TEECCCCCCC
T ss_pred             CcCCCCcCCC
Confidence            9999888654

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.1e-11  Score=100.97  Aligned_cols=93  Identities=20%  Similarity=0.222  Sum_probs=77.2

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCC-CceeeEEEEEEeCCccccc-eEEecccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSG-ENIISYELYWNDTYAKAKH-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPR  698 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~-~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~  698 (904)
                      |.+|.++.+..++.+++.|+|.++...+ ..+.+|.++++..+...+. ........+++|.+|++++.|.|+|+|+|..
T Consensus         1 P~~P~~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~~rV~A~n~~   80 (96)
T d1x5xa1           1 PSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSE   80 (96)
T ss_dssp             CCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSS
T ss_pred             CccCCCCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeecCCCCEEEECCCCCCCEEEEEEEEEcCC
Confidence            4688999999999999999999876544 4677888888776655543 3344556799999999999999999999999


Q ss_pred             CCCCCCCCeeEEecC
Q psy8771         699 GEGATTPPIPVRTKQ  713 (904)
Q Consensus       699 G~~~~s~~~~~~t~~  713 (904)
                      |.|.+|..+.++|.+
T Consensus        81 G~s~~S~~~~~~T~p   95 (96)
T d1x5xa1          81 GKSNPSEVVEFTTCP   95 (96)
T ss_dssp             CEEEECCCEEEECCC
T ss_pred             cEeCCCCCEEEEeCc
Confidence            999999999998864

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.7e-11  Score=98.80  Aligned_cols=90  Identities=22%  Similarity=0.339  Sum_probs=78.6

Q ss_pred             CCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       201 P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      .++|.++++...+.+++.|+|++|.+.+.+|.|+|...................+.|.+|.|++.|.|+|+|.|..|.|.
T Consensus         2 l~aP~n~~~~~~s~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~   81 (92)
T d1qg3a1           2 LGAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGP   81 (92)
T ss_dssp             CCCCEEEEEEECSTTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEECSSCBCC
T ss_pred             CCcCCCCEEEEccCCEEEEEEEecCCCccceEEeeeeccccccEEEEecCCccEEEECCCCCCcEEEEEEEEEeCCcCcC
Confidence            36899999999999999999999988899999999987655554444555668899999999999999999999999999


Q ss_pred             CCCCeEEecC
Q psy8771         281 PSSPAVITTG  290 (904)
Q Consensus       281 ~s~~~~~~t~  290 (904)
                      +|..+.++|.
T Consensus        82 ~S~~~~~~T~   91 (92)
T d1qg3a1          82 YSSLVSCRTH   91 (92)
T ss_dssp             CCCCEEEECC
T ss_pred             CCCCEEEEcC
Confidence            9999888764

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.9e-11  Score=105.35  Aligned_cols=107  Identities=24%  Similarity=0.421  Sum_probs=85.0

Q ss_pred             ecCCCCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCc------ceEEEeecCceEEEEcCCC
Q psy8771         476 TKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMS------AWETQVVDNNQLTTISDLT  547 (904)
Q Consensus       476 t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~L~  547 (904)
                      +.+++|+.+|.++++..++.++|.|+|++|..  .++.+..|.+.+.........      .+..........+.|.+|.
T Consensus         9 s~e~~P~~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~   88 (125)
T d1uena_           9 SGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLE   88 (125)
T ss_dssp             SCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCC
T ss_pred             ccCcCCCCCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEeCCCccEEEECCCC
Confidence            44568888999999999999999999998753  356788999988765432211      1222333567789999999


Q ss_pred             CCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCC
Q psy8771         548 PHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ  582 (904)
Q Consensus       548 p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~  582 (904)
                      |++.|.|+|+|+|..|.|++|..+.++|.++.|+.
T Consensus        89 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp~  123 (125)
T d1uena_          89 PFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPS  123 (125)
T ss_dssp             SSCEEEEEEEEEESSCEEEECCCEEEECCCCCSSC
T ss_pred             CCCEEEEEEEEEeCCcccCCCCCEEEECCCCCcCC
Confidence            99999999999999999999999999998776653

>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: CD4 C2-set domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=8.5e-12  Score=97.96  Aligned_cols=70  Identities=19%  Similarity=0.249  Sum_probs=61.9

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      ..+.+|++++|.|.+.|.|.|.|.|+++++       ....++..|.|.++  +|+|.|+|.|.|..|..+..+.|.|.
T Consensus         9 ~~v~~G~~~~L~C~~~g~p~P~i~W~~~~~-------~~~~~~~~l~i~~v~~~DsG~Y~C~a~N~~g~~~~~~~v~V~   80 (84)
T d2nxyb2           9 THLLQGQSLTLTLESPPGSSPSVQCRSPRG-------KNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL   80 (84)
T ss_dssp             SCEETTCCEEEEEECCTTCCCEEEEECTTC-------CEEEESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECEE
T ss_pred             eEEECCCeEEEEEEeEcCCchheEEEeecc-------cceeeeeeeeeeecccccccEEEEEEEeCCCEEEEEEEEEEE
Confidence            678899999999999999999999999832       23346778999999  69999999999999999999999888

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=9.2e-12  Score=103.33  Aligned_cols=97  Identities=22%  Similarity=0.428  Sum_probs=76.7

Q ss_pred             CCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEE
Q psy8771         577 QGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL  656 (904)
Q Consensus       577 ~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v  656 (904)
                      ...|.+|.++.+..++.+++.|+|.+|..                                        ..++.+.+|.|
T Consensus         8 ~~~P~~P~~l~~~~~~~~sv~lsW~~P~~----------------------------------------~~~~~i~~Y~v   47 (107)
T d1x5fa1           8 GPLPSAPRDVVASLVSTRFIKLTWRTPAS----------------------------------------DPHGDNLTYSV   47 (107)
T ss_dssp             CCCCCCCEEEEEEEECSSCEEEEEECCSS----------------------------------------CSSCCSSEEEE
T ss_pred             CCCCcCCCccEEEEecCCEEEEEEECCcc----------------------------------------CCCCceEEEEE
Confidence            34667788888888888888888877643                                        14667889999


Q ss_pred             EEEeCCccccceE--EecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771         657 YWNDTYAKAKHHR--RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ  713 (904)
Q Consensus       657 ~~~~~~~~~~~~~--~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~  713 (904)
                      .|+..+...+...  .......++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.+
T Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~  106 (107)
T d1x5fa1          48 FYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP  106 (107)
T ss_dssp             EEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred             EEEeCCCCceEEEEEeCCCccEEEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence            9988766655333  23456799999999999999999999999999999999998864

>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR1 [TaxId: 9606]

Probab=99.26  E-value=1e-11  Score=103.99  Aligned_cols=88  Identities=23%  Similarity=0.449  Sum_probs=67.6

Q ss_pred             CCCCeEEcC-CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcc---ccCCCC--cee-----------ecceEEEEee
Q psy8771         102 RVPPQFSIP-PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI---ELTPDD--KLP-----------VGRNVLTLDR  164 (904)
Q Consensus       102 ~~~P~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~---~~~~~~--~~~-----------~~~~~l~i~~  164 (904)
                      +.+|.|... |.+ +++.+|+++.|.|.+.|.|.|.|.|+|++..   .+....  +..           .....|.|.+
T Consensus         2 ~~~P~i~~~~P~~-~tv~~G~~v~l~C~v~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~   80 (109)
T d2fdbp2           2 RHRPILQAGLPAN-ASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTTDKEIEVLYIRN   80 (109)
T ss_dssp             CSCCEECTTCSCC-EEECTTCCEEEEEEEECSSCCEEEEEEEC-------------CEEEECCEEEEETTEEEEEEEECS
T ss_pred             CCCCEEcCCCCCC-EEEecCCcEEEEEEEEEcCCCeEEEEecCccCCceeccCCceeEeecccceeEEecCCcEEEEECC
Confidence            456888765 677 9999999999999999999999999997321   111111  111           1235799999


Q ss_pred             e--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         165 V--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       165 l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      +  +|+|.|+|.|.|..|...+++.|.|
T Consensus        81 ~~~~D~G~Y~C~a~N~~G~~~~~~~L~V  108 (109)
T d2fdbp2          81 VTFEDAGEYTCLAGNSIGISFHSAWLTV  108 (109)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred             CCHHHCeEEEEEEEECCCEEEEEEEEEE
Confidence            9  6999999999999999999999987

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=9.4e-12  Score=104.63  Aligned_cols=94  Identities=18%  Similarity=0.298  Sum_probs=76.6

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe----ecCceEEEEcCCCCCCeEEEEEE
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV----VDNNQLTTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~L~p~t~Y~~~V~  557 (904)
                      |.+|.++++...+.+++.|+|++|.+.++.+.+|.|+++.........|....    ....+.+.+.+|.|++.|.|+|+
T Consensus        11 P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~   90 (111)
T d1wisa1          11 PGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMR   90 (111)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCE
T ss_pred             CcCCCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeeecccceeEEEeCCCCCCCEEEEEEE
Confidence            47899999999999999999999988888999999999877654443333222    25567899999999999999999


Q ss_pred             EEeCCCCCCCCCcE-EEec
Q psy8771         558 AFTSVGPGPLSAPV-LVKT  575 (904)
Q Consensus       558 a~~~~g~~~~S~~~-~~~t  575 (904)
                      |.|..|.|.+|.+. .++|
T Consensus        91 A~N~~G~s~~S~~s~~~~T  109 (111)
T d1wisa1          91 QVNIVGTSPPSQPSRKIQT  109 (111)
T ss_dssp             EECSSCBCCCCCCCCCEEC
T ss_pred             EEcCCcCCCCcCCCCCEEc
Confidence            99999999888763 3554

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.26  E-value=1.9e-11  Score=100.49  Aligned_cols=96  Identities=24%  Similarity=0.435  Sum_probs=80.9

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEE
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~  557 (904)
                      |+.+|.++.+..++.++|.|+|+.+  ...++.+.+|.|+|+..++.....|.... .....++.|.+|+|++.|.|+|+
T Consensus         1 P~~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~   80 (101)
T d1x4ya1           1 PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQ   80 (101)
T ss_dssp             CCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEEE
T ss_pred             CCCCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEEcCCeeEEEEcCCCCCCEEEEEEE
Confidence            5678999999999999999999864  45567999999999987655444444433 36678899999999999999999


Q ss_pred             EEeCCCCCCCCCcEEEecC
Q psy8771         558 AFTSVGPGPLSAPVLVKTQ  576 (904)
Q Consensus       558 a~~~~g~~~~S~~~~~~t~  576 (904)
                      |+|..|.|++|..+.++|.
T Consensus        81 a~n~~G~s~~S~~~~~~T~   99 (101)
T d1x4ya1          81 CFNEGGESEFSNVMICETK   99 (101)
T ss_dssp             EECTTCCCCCCCCEEEECC
T ss_pred             EEcCCCCCCCCCcEEEEcc
Confidence            9999999999999998885

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=3.1e-12  Score=109.09  Aligned_cols=100  Identities=17%  Similarity=0.187  Sum_probs=73.3

Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE-ec-CcceEEecCCCCCceEEEEE
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT-LK-NQTSFVLDELKKWTEYRIWV  792 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~-~~-~~~~~~i~~L~p~t~Y~~~V  792 (904)
                      .|..+|.++.+..++.++|.|+|++|.. ..+..+.+|.|+|+....+.....+.. .. ..+.++|.+|+|++.|.|+|
T Consensus        14 ~pp~~P~~p~v~~vt~~sv~l~W~~P~~-~~g~~i~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV   92 (120)
T d1wfua_          14 VPLSKPHPPVVGKVTHHSIELYWDLEQK-EKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRL   92 (120)
T ss_dssp             CCCCCCCCCBCCCEETTEEEEECTTTSC-SCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEE
T ss_pred             cCCCcCCCCEEeEecCCEEEEEEECCcc-cCcccccceeeeeeeecccccccceeeeccccccEEeCCCCCCCcEeeEEE
Confidence            3445677788888899999999998853 223356677777764322111112222 22 77899999999999999999


Q ss_pred             EEeeCCCCCCCCCcEEeecCCCC
Q psy8771         793 LAGTSIGDGPSSYPITIRTHEDD  815 (904)
Q Consensus       793 ~a~~~~g~g~~s~~~~~~t~~~~  815 (904)
                      +|+|..|.|++|+.+.++|....
T Consensus        93 ~A~n~~G~s~~S~~~~~~T~~~~  115 (120)
T d1wfua_          93 KVTSPSGEYEYSPVVSVATTRES  115 (120)
T ss_dssp             EEECSSSCEEECCCEEEECCCCC
T ss_pred             EEEeCCcEeCCCCCEEEEeCCCC
Confidence            99999999999999999886543

>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=99.25  E-value=7.1e-12  Score=101.37  Aligned_cols=78  Identities=19%  Similarity=0.356  Sum_probs=65.6

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCC-cee--ecceEEEEeee--cCCeEEEEEEEe
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDD-KLP--VGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~-~~~--~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      +|.|...|.+ +.+.+|+++.|.|.+.|.|.| .|.|+++ |..+.... +..  .++++|.|.++  +|+|.|+|.|.|
T Consensus         2 ~P~i~~~p~~-~~v~~g~~~~l~C~~~g~p~p~~v~W~~~-g~~l~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N   79 (94)
T d1biha1           2 YPVLKDQPAE-VLFRENNPTVLECIIEGNDQGVKYSWKKD-GKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAET   79 (94)
T ss_dssp             CCEECCCCSE-EEEETTSCEEECCCEESCCSSCEEEEEES-SSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEE
T ss_pred             CCEEEecCCc-EEEeCCCeEEEEEEecCCCCeeEEEEEee-eeeeeeecceeeecccceEEEEeccChhcCeEEEEEEEe
Confidence            5889999988 999999999999999999976 6999999 66665432 222  35679999999  699999999999


Q ss_pred             cCcceE
Q psy8771         178 VLGVIE  183 (904)
Q Consensus       178 ~~g~~~  183 (904)
                      ..|...
T Consensus        80 ~~G~~~   85 (94)
T d1biha1          80 PAGVAS   85 (94)
T ss_dssp             TTEEEE
T ss_pred             CCCEEE
Confidence            999754

>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Myosin-binding protein C, slow-type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=8.4e-12  Score=105.01  Aligned_cols=84  Identities=18%  Similarity=0.236  Sum_probs=67.6

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCC---CCeEEEeeCCcccc--CCCCceee----------cceEEEEeee--cCCe
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSP---MPFVKWRKGQNIEL--TPDDKLPV----------GRNVLTLDRV--TESE  169 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p---~p~i~W~k~~~~~~--~~~~~~~~----------~~~~l~i~~l--~d~g  169 (904)
                      |+..|++ +++.+|++++|.|.+.|.|   .|.|.|+|++...+  ....++..          ....|.|.++  +|+|
T Consensus         3 F~~~P~~-~~v~~G~~v~l~C~v~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G   81 (113)
T d2dava1           3 FIEKPQG-GTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAG   81 (113)
T ss_dssp             CCSCCCC-CEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCE
T ss_pred             EeECCce-EEEeCCCEEEEEEEEccCCCCCCCEEEEEEeeccccccccceeeeeccceeeEeecCEEEEEEccCCHHHCe
Confidence            5677788 9999999999999999999   58999999843322  12223221          1346999999  6999


Q ss_pred             EEEEEEEecCcceEEEEEEEEE
Q psy8771         170 NYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       170 ~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      .|+|.|.|..|..+..+.|.|.
T Consensus        82 ~Y~C~a~N~~G~~~~~~~L~V~  103 (113)
T d2dava1          82 NYRCEVTYKDKFDSCSFDLEVH  103 (113)
T ss_dssp             EEEEEEECSSCEEEECCEEEEE
T ss_pred             EEEEEEEeCCCEEEEEEEEEEE
Confidence            9999999999999999999998

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=4.7e-13  Score=113.30  Aligned_cols=105  Identities=21%  Similarity=0.321  Sum_probs=78.5

Q ss_pred             eEEecCCCCCCCCCCcEEEe-cCCCEEEEEecCCCCCCC----CccEEEEEEEEEEccCCCCccEEEEec-CcceEEecC
Q psy8771         708 PVRTKQYVPGAPPQNVSCEP-LSSTSIRISWEPPPVERS----NGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDE  781 (904)
Q Consensus       708 ~~~t~~~~p~~~P~~l~~~~-~~~~~v~l~W~~~~~~~~----~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~  781 (904)
                      .|+|.+..|..+|.+|.+.. .+.+++.|+|++|..+..    ++.+.+|.|++.    ........... +.+.+.|.+
T Consensus         2 ~~~T~~~~pp~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~----~~~~~~~~~~~~~~~~~~i~~   77 (117)
T d2cspa1           2 EFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAK----GQRVAEVIFPTADSTAVELVR   77 (117)
T ss_dssp             CCCCCCCCCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESS----SSEEEEECCTTCSEEEEESHH
T ss_pred             EEEeCCCCCCCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEee----cccceeeeeeccceeeeeccC
Confidence            57788888888999999854 567899999999864332    345667766532    11111222222 667889999


Q ss_pred             CCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771         782 LKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP  816 (904)
Q Consensus       782 L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P  816 (904)
                      |++++.|.|+|+|+|..|.|..|.++.++|....|
T Consensus        78 L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t~~~vP  112 (117)
T d2cspa1          78 LRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVP  112 (117)
T ss_dssp             HHHHTCSCBEEEEEESSCCCCCCSCBCCCHHHHSC
T ss_pred             CCCCcEEEEEEEEEcCCCcCCCCCCEEeeCCCCCC
Confidence            99999999999999999999999999998875554

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.2e-11  Score=101.83  Aligned_cols=96  Identities=18%  Similarity=0.271  Sum_probs=78.6

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      +|.+|++..++.+++.|+|+++.     +.+.+|.|+|+..++..   ....+. ..+.++|.+|.|++.|.|+|+|++.
T Consensus         3 ~P~~l~~~~~t~~si~l~W~~p~-----~~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~   74 (102)
T d2cuha1           3 GPTQLRALNLTEGFAVLHWKPPQ-----NPVDTYDIQVTAPGAPP---LQAETPGSAVDYPLHDLVLHTNYTATVRGLRG   74 (102)
T ss_dssp             SCEEEECCCCSSSCEEEEEECCS-----SCCSEEEEEEECSSSCC---EEEEEETTCSEEEECSCCSSSEEEEEEEEEET
T ss_pred             CCCccEEEEeCCCEEEEEEEeee-----ccceeeEEEEEeccccc---eeeeeeeeeeeEEEccEEeeEEEEEEEEEEeC
Confidence            58999999999999999999873     45889999998765432   233444 8889999999999999999999998


Q ss_pred             CCCCCCCCcEEeecCCCCCCCCccCC
Q psy8771         798 IGDGPSSYPITIRTHEDDPSEVCPTQ  823 (904)
Q Consensus       798 ~g~g~~s~~~~~~t~~~~P~~v~~~~  823 (904)
                      .|.|..+ .+.++|..++|..+...+
T Consensus        75 ~~~s~~~-~~~~~T~~~~P~~l~~~~   99 (102)
T d2cuha1          75 PNLTSPA-SITFTTGLEAPRDLEAKE   99 (102)
T ss_dssp             TEECCCE-EEEEESCCCCTTTSSSCC
T ss_pred             CCCcCCE-EEEEECCCCCCCCCEeec
Confidence            8887765 377899988887766544

>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.24  E-value=5.1e-12  Score=102.82  Aligned_cols=86  Identities=17%  Similarity=0.392  Sum_probs=66.7

Q ss_pred             CCCCeEEcCCCCceEEecC---CCeEEEEEEccCCCCeEEEeeCCccccCCC--Cceee-cceEEEEeee--cCCeEEEE
Q psy8771         102 RVPPQFSIPPPALLEVMLD---SPLNLSCVAVGSPMPFVKWRKGQNIELTPD--DKLPV-GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g---~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~~-~~~~l~i~~l--~d~g~Y~c  173 (904)
                      ..+|.|+..|.+ ..+.+|   +++.|.|.+.|.|.|.|+|+|+ +..+...  .++.. ++..|.|..+  +|+|.|+|
T Consensus         2 ~~~P~f~~~P~~-~~~~~g~~~~~v~l~C~~~g~P~p~v~W~~n-g~~i~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C   79 (97)
T d1cs6a1           2 SYGPVFEEQPAH-TLFPEGSAEEKVTLTCRARANPPATYRWKMN-GTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQC   79 (97)
T ss_dssp             CEEEEEEECCCC-EEEETTCSCCEEEECCEEEEESCCEEEEEET-TEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEE
T ss_pred             CcCCEEEEeCCC-EEEECccCCCeEEEEEEEEEeCCCEEEEEEe-eeeccCCCCceEEeeeeeEEEEecccccCCEEEEE
Confidence            357889999988 777666   7899999999999999999999 6666433  23333 4556777777  69999999


Q ss_pred             EEEecCcceE-EEEEEE
Q psy8771         174 IAASVLGVIE-TSTIVK  189 (904)
Q Consensus       174 ~a~n~~g~~~-~~~~l~  189 (904)
                      .|.|..|... ..+.|.
T Consensus        80 ~a~N~~G~~~S~~a~L~   96 (97)
T d1cs6a1          80 VATNARGTVVSREASLR   96 (97)
T ss_dssp             EEEETTEEEECCCEEEE
T ss_pred             EEEECCCEEEEEEEEEe
Confidence            9999999864 355553

>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.8e-11  Score=101.04  Aligned_cols=86  Identities=21%  Similarity=0.321  Sum_probs=70.3

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCC---CCeEEEeeCCccccCC--CCceee----------cceEEEEeee--cC
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSP---MPFVKWRKGQNIELTP--DDKLPV----------GRNVLTLDRV--TE  167 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p---~p~i~W~k~~~~~~~~--~~~~~~----------~~~~l~i~~l--~d  167 (904)
                      |.|+..|.+ +++..|++++|.|.+.|.|   .|.|.|+|++...+..  ..++..          ....|.|.++  +|
T Consensus         5 ~~Fv~~P~~-~~v~~G~~v~l~C~v~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D   83 (110)
T d2avga1           5 GLFVMRPQD-GEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF   83 (110)
T ss_dssp             CSEEECCCC-EEEETTSEEEEEEEEECCSCSSSCEEEEECSTTCCSTTTCSSSEEEEEEEETTTTEEEEEEEEESCCTTC
T ss_pred             CEeEECCCe-EEEECCCCEEEEEeecCCCCCCCCEEEEEeCceeeecccCCceeEeeeeeEEecccCEEEEEEeccCHHH
Confidence            468888988 9999999999999999999   6889999984333322  223321          1347999999  69


Q ss_pred             CeEEEEEEEecCcceEEEEEEEEE
Q psy8771         168 SENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +|.|+|.|.|..|..++++.|.|.
T Consensus        84 ~G~Y~C~a~N~~G~~~~~~~L~V~  107 (110)
T d2avga1          84 TGGYRCEVSTKDKFDCSNFNLTVH  107 (110)
T ss_dssp             CEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             CcEEEEEEEECCCeEEEEEEEEEE
Confidence            999999999999999999999998

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

Probab=99.23  E-value=3.2e-11  Score=95.63  Aligned_cols=58  Identities=21%  Similarity=0.320  Sum_probs=45.4

Q ss_pred             CCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC-CCCCCCCeeEEe
Q psy8771         648 GENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG-EGATTPPIPVRT  711 (904)
Q Consensus       648 ~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G-~~~~s~~~~~~t  711 (904)
                      ++.+.+|.|.+...      ........++++.+|.|++.|.|+|+|+|..| .|.+|..+.++|
T Consensus        30 ~~~i~~Y~i~~~~~------~~~~~~~t~~~~~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT   88 (88)
T d1k85a_          30 NVGVTGYDVYNGTA------LATTVTGTTATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT   88 (88)
T ss_dssp             CSSEEEEEEEESSS------EEEEESSSEEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred             CCCEEEEEEEccce------EEEecCCCEEEECCCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence            34577888875321      23344567899999999999999999999999 688898888775

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.8e-11  Score=99.27  Aligned_cols=93  Identities=32%  Similarity=0.379  Sum_probs=71.8

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      .+|..+.+ ....+++.|+|++|...+| +|.+|.|+|+..++...........  .....+.+.+|.|++.|.|+|+|+
T Consensus         4 ~~P~~~~~-~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~   82 (101)
T d2haza1           4 SSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAAL   82 (101)
T ss_dssp             CCCEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEEEE
T ss_pred             cCCccCEE-EeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeeecccceeEEEecCCCCCeEEEEEEEEE
Confidence            67765554 5677899999999876666 6999999999876543221111111  335679999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecC
Q psy8771         560 TSVGPGPLSAPVLVKTQ  576 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~  576 (904)
                      |..|.|++|....+.|.
T Consensus        83 N~~G~g~~S~~~~~~T~   99 (101)
T d2haza1          83 NGKGLGEISAASEFKTQ   99 (101)
T ss_dssp             ETTEECCCCCCEEEECC
T ss_pred             eCCcCcCCCCceeEEeC
Confidence            99999999999988884

>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Tyrosine-protein kinase receptor tyro3, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.1e-11  Score=99.59  Aligned_cols=79  Identities=23%  Similarity=0.363  Sum_probs=65.1

Q ss_pred             CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee------cceEEEEeee--cCCeEEEEEEEecCcce
Q psy8771         111 PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV------GRNVLTLDRV--TESENYTCIAASVLGVI  182 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~------~~~~l~i~~l--~d~g~Y~c~a~n~~g~~  182 (904)
                      |.+ +++.+|+++.|.|.+.|.|.|.|.|+|+ +..+....+..+      ....|.|.++  +|+|.|+|.|.|..|..
T Consensus         3 P~~-~~v~~G~~~~l~C~v~g~p~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~   80 (91)
T d1rhfa1           3 PVK-LTVSQGQPVKLNCSVEGMEEPDIQWVKD-GAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETE   80 (91)
T ss_dssp             CEE-EEEETTCCEEEEEEEESCSSCCEEEEET-TEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCE
T ss_pred             Cee-EEEcCCCeEEEEEEEEecCCceEEEEEe-ecccccceeeeeeecccCceeeEEECCCCcccCEEEEEEEEECCCCE
Confidence            445 8999999999999999999999999999 777766555432      2347899998  69999999999999974


Q ss_pred             -EEEEEEEEE
Q psy8771         183 -ETSTIVKVQ  191 (904)
Q Consensus       183 -~~~~~l~v~  191 (904)
                       +..+.|.|.
T Consensus        81 ~S~~~~l~V~   90 (91)
T d1rhfa1          81 ISQPVWLTVE   90 (91)
T ss_dssp             ECCCEEEEEE
T ss_pred             EEEEEEEEEE
Confidence             457778775

>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cervical EMMPRIN
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=2.5e-11  Score=99.71  Aligned_cols=88  Identities=20%  Similarity=0.344  Sum_probs=69.5

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccc---cC--CCCceee----cceEEEEeee---cCCe
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIE---LT--PDDKLPV----GRNVLTLDRV---TESE  169 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~---~~--~~~~~~~----~~~~l~i~~l---~d~g  169 (904)
                      .||.|...+.+ ..+.+|+.+.|.|.+.|.|.| .+.|+|++...   +.  ...++.+    ....|.|.++   +|+|
T Consensus         1 GPP~i~~~~~~-~~v~~G~~v~l~C~v~g~P~p~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~~D~G   79 (101)
T d3b5ha1           1 GPPRVKAVKSS-EHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPG   79 (101)
T ss_dssp             CSCCCEESCSE-EEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSE
T ss_pred             CCceEEEcCCc-EEECcCCeEEEEEEEEecCCeeEEEEEeccceeeeecccCCCceEEEEeCCCEEEEEEeccccccCCE
Confidence            38899888887 999999999999999999988 69999963211   11  1233332    3447999987   3899


Q ss_pred             EEEEEEEecCcceEEEEEEEEE
Q psy8771         170 NYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       170 ~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      .|+|.|.|..|..+..+.|.|+
T Consensus        80 ~Y~C~A~N~~G~~~~~~~L~Vr  101 (101)
T d3b5ha1          80 QYRCNGTSSKGSDQAIITLRVR  101 (101)
T ss_dssp             EEEEEEEETTEEEEEEEEEEEC
T ss_pred             EEEEEEEECCCEEEEEEEEEEC
Confidence            9999999999999999888874

>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of trkB receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.1e-11  Score=98.91  Aligned_cols=85  Identities=19%  Similarity=0.257  Sum_probs=68.3

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee---------cceEEEEeee--cCCeE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV---------GRNVLTLDRV--TESEN  170 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~---------~~~~l~i~~l--~d~g~  170 (904)
                      ..||.|+....    ...++...|.|.+.|.|.|+|.|+|+ +..+..+.+...         ....|.|.++  +|+|.
T Consensus         2 ~~pP~it~~~~----~~~~~~~~i~~~v~G~P~P~i~W~~~-g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~   76 (103)
T d1wwbx_           2 HFAPTITFLES----PTSDHHWCIPFTVKGNPKPALQWFYN-GAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGD   76 (103)
T ss_dssp             CCCCCCCCCCC----CCCCCEEEEEEEEECSSCCEEEEEET-TEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred             ccCCeeEEcCC----CccceeEEEEEEEEEeCCCEEEEEEC-CEEeeeeeeeeeeecccccccceEEEEECCCCHHhCce
Confidence            46788764333    23677888999999999999999999 777776655432         1346999998  69999


Q ss_pred             EEEEEEecCcceEEEEEEEEE
Q psy8771         171 YTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       171 Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |+|.|.|..|+.+..+.|.|.
T Consensus        77 Y~C~a~N~~G~~~~~~~v~V~   97 (103)
T d1wwbx_          77 YTLIAKNEYGKDEKQISAHFM   97 (103)
T ss_dssp             EEEEEECSSCEEEEEEEECCS
T ss_pred             EEEEEeccCCEEEEEEEEEEE
Confidence            999999999999999888887

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.5e-11  Score=99.72  Aligned_cols=95  Identities=24%  Similarity=0.352  Sum_probs=77.5

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      ||.+|++..++.+++.|+|..|......+....|+|+++............... ....+.|.+|+|++.|.|+|+|.+.
T Consensus         5 pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra~~~   84 (104)
T d2b5ib2           5 APISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPL   84 (104)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEEEES
T ss_pred             CCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEEecCCCcEEEEECCCCCCCEEEEEEEEEEC
Confidence            789999999999999999999965545566789999998876543333344444 7889999999999999999999998


Q ss_pred             CCC----CCCCCcEEeecCC
Q psy8771         798 IGD----GPSSYPITIRTHE  813 (904)
Q Consensus       798 ~g~----g~~s~~~~~~t~~  813 (904)
                      .|.    |++|.++.++|.|
T Consensus        85 ~g~~g~wS~wS~~v~~~T~P  104 (104)
T d2b5ib2          85 QGEFTTWSPWSQPLAFRTKP  104 (104)
T ss_dssp             CCSSCCCCCCCCCEEEECCC
T ss_pred             CCCCCCCCCCcCCEEEECCC
Confidence            874    5668889999864

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=1.7e-11  Score=102.96  Aligned_cols=96  Identities=16%  Similarity=0.176  Sum_probs=71.1

Q ss_pred             CCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEE
Q psy8771         576 QQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYE  655 (904)
Q Consensus       576 ~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~  655 (904)
                      +.+.|.+|.++++..++.+++.|+|.++.+                                         +++.+.+|.
T Consensus         7 p~~~P~~P~~~~~~~~~~~sv~l~W~pp~~-----------------------------------------~~~~i~~y~   45 (111)
T d1wisa1           7 PPELPGPPTNLGISNIGPRSVTLQFRPGYD-----------------------------------------GKTSISRWL   45 (111)
T ss_dssp             CCCCCCCCEEEEEESCCSSCEEEEEECCCC-----------------------------------------CSSCCSEEE
T ss_pred             CCCCCcCCCCCEEEEcCCCEEEEEEeCCCC-----------------------------------------CCCceeEEE
Confidence            445677888888888888888888887765                                         556677777


Q ss_pred             EEEEeCCcccc-------ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCC-eeEEec
Q psy8771         656 LYWNDTYAKAK-------HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTK  712 (904)
Q Consensus       656 v~~~~~~~~~~-------~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~-~~~~t~  712 (904)
                      |+|+.......       ..........+.|.+|.|++.|.|+|+|+|..|.|.+|.. ..++|.
T Consensus        46 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~~~Tl  110 (111)
T d1wisa1          46 VEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTL  110 (111)
T ss_dssp             EEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECC
T ss_pred             EeeeecccCCCcceeeeeeeecccceeEEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCCCCEEcc
Confidence            77766544332       1112234568999999999999999999999999998865 346664

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=6e-13  Score=109.47  Aligned_cols=96  Identities=18%  Similarity=0.287  Sum_probs=77.6

Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEE-Eec-CcceEEecCCCCCceEEEEE
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV-TLK-NQTSFVLDELKKWTEYRIWV  792 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~-~~~-~~~~~~i~~L~p~t~Y~~~V  792 (904)
                      .|...|.++++..++.+++.|+|++|  ...||.+.+|.|+|+..+......... ... ..+.+.+.+|++++ |.|+|
T Consensus         3 ~~~d~P~~v~~~~~~~~sv~l~W~pP--~~~ng~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t-Y~~rV   79 (102)
T d2dtge1           3 KADDIVGPVTHEIFENNVVHLMWQEP--KEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPGN-YSVRI   79 (102)
T ss_dssp             CCCCCCCCCCCCSSSSSCCCCCCCCC--CSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSSE-ECCCC
T ss_pred             CCCCCCCCCEEEEECCCEEEEEEEeC--CCCcceEEEeeeEEEecCCCCceeeeeeecccceEEEEEeccceee-EEEEE
Confidence            45557888999999999999999988  467899999999998766443322111 122 66779999999975 99999


Q ss_pred             EEeeCCCCCCCCCcEEeecCC
Q psy8771         793 LAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       793 ~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      +|.|..|.|++|+++.|.|.+
T Consensus        80 ~A~n~~G~g~~S~~v~f~~~e  100 (102)
T d2dtge1          80 RATSLAGNGSWTEPTYFYVTD  100 (102)
T ss_dssp             CEEETTBCCCCCCCCEECCCC
T ss_pred             EEEcCCccCCCCCCEEEEccC
Confidence            999999999999999998865

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=4.1e-11  Score=97.11  Aligned_cols=86  Identities=17%  Similarity=0.295  Sum_probs=70.3

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      +|.+|++..++.+++.|+|++|.    ++.+.+|.|+|+..+...+ .....+. ..++++|.||.|++.|.|+|+|.+.
T Consensus         8 ~P~~l~v~~~t~~si~l~W~~p~----~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~a~~~   82 (95)
T d2fnba_           8 QLTDLSFVDITDSSIGLRWTPLN----SSTIIGYRITVVAAGEGIP-IFEDFVDSSVGYYTVTGLEPGIDYDISVITLIN   82 (95)
T ss_dssp             CCTTCEEECCCSSCEEEECCCCC----CSSCCEEEEEEEEETSCCE-EEEEECCSSCSEEEECCCCTTSEEEEEEEEEET
T ss_pred             cCCCeEEEEEcCCEEEEEEEecC----CceEEeEEEEEEEeeccce-EEEEEeCCCCeEEEEecccCCEEEEEEEEEEeC
Confidence            58999999999999999999883    3468999999998775443 2334445 8899999999999999999999999


Q ss_pred             CCCCCCCCcEEee
Q psy8771         798 IGDGPSSYPITIR  810 (904)
Q Consensus       798 ~g~g~~s~~~~~~  810 (904)
                      .|.|.++. +.++
T Consensus        83 ~g~s~p~~-~~~~   94 (95)
T d2fnba_          83 GGESAPTT-LTQQ   94 (95)
T ss_dssp             TEECCCCE-EEEE
T ss_pred             CcEeCCEE-EEEE
Confidence            99887663 4443

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=1.8e-11  Score=107.16  Aligned_cols=105  Identities=21%  Similarity=0.300  Sum_probs=83.1

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCC---------ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNG---------QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT  553 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~---------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~  553 (904)
                      ..+..+.+..++.+++.|+|++|...++         .+..|.+.+.....  ...|........+.+.|.+|.|++.|.
T Consensus        19 ~~~~~P~V~~v~~~sv~l~W~~P~~~~~~~~~~~~~~~~~~y~v~~~~~~~--~~~~~~~~~~~~~~~~i~~L~P~t~Y~   96 (137)
T d1wk0a_          19 SNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGK--DGKYKSVYVGEETNITLNDLKPAMDYH   96 (137)
T ss_dssp             TCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCT--TSCCEEEEEESCSEEEECSCCTTCEEC
T ss_pred             CCCCCCEEEEeEcCEEEEEEeCcCcCCCceeeccccceEEeeEEEEeeCCC--CccEEEEEecCccEEEECCCCCCcEEE
Confidence            4455667899999999999999764332         45678888876653  245666666778889999999999999


Q ss_pred             EEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEE
Q psy8771         554 IRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAV  589 (904)
Q Consensus       554 ~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~  589 (904)
                      |+|+|+|..|.|.+|....++|....|.+|.-.++.
T Consensus        97 f~V~A~n~~G~g~~S~~~~~~T~~~~P~~p~~p~i~  132 (137)
T d1wk0a_          97 AKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRIS  132 (137)
T ss_dssp             EEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCCC
T ss_pred             EEEEEEcCCcccCCCCCEEEECCCCCCCCCCCCEEc
Confidence            999999999999999999999988887666554443

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

Probab=99.20  E-value=6.3e-11  Score=93.88  Aligned_cols=84  Identities=30%  Similarity=0.423  Sum_probs=69.3

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      |.+|.+|.+..++.+++.|+|++|.+. +.+.+|.|++...         .......+++.+.+|.|++.|.|+|+|+|.
T Consensus         4 P~~P~~l~~~~~~~~sv~lsW~~p~~~-~~i~~Y~i~~~~~---------~~~~~~~t~~~~~~L~p~t~Y~~~V~A~n~   73 (88)
T d1k85a_           4 PTAPTNLASTAQTTSSITLSWTASTDN-VGVTGYDVYNGTA---------LATTVTGTTATISGLAADTSYTFTVKAKDA   73 (88)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECCSCC-SSEEEEEEEESSS---------EEEEESSSEEEECCCCSSCEEEEEEEEEET
T ss_pred             cCCCCCcEEEEecCCEEEEEEeCCCCC-CCEEEEEEEccce---------EEEecCCCEEEECCCCCCCEEEEEEEEEEC
Confidence            478999999999999999999998754 4688999975321         223345678999999999999999999999


Q ss_pred             CC-CCCCCCcEEEec
Q psy8771         562 VG-PGPLSAPVLVKT  575 (904)
Q Consensus       562 ~g-~~~~S~~~~~~t  575 (904)
                      .| .|.+|..+.++|
T Consensus        74 ~G~~s~~S~~v~vtT   88 (88)
T d1k85a_          74 AGNVSAASNAVSVKT   88 (88)
T ss_dssp             TTEECCCCCCEEEEC
T ss_pred             CCCcCCCCcCEEEEC
Confidence            99 688898887765

>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Receptor-type tyrosine-protein phosphatase mu
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3e-11  Score=97.94  Aligned_cols=86  Identities=14%  Similarity=0.127  Sum_probs=63.9

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEee--CCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK--GQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k--~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      +|.|. .+.+ +.+.+|+++.|+|.+.|.|.|.+.|.+  +++..+........    ..++|.|.++  +|+|.|+|.|
T Consensus         2 ~P~f~-~~~~-~~v~~G~~v~l~C~~~g~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a   79 (96)
T d2c9aa1           2 TPHFL-RIQN-VEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMI   79 (96)
T ss_dssp             SCEEC-CCCC-EEECSSSCEEEEEEEESCCCSSCEEEEEETTBCCCCEEEEEEEETTEEEEEEEECSCCGGGCSEEEEEE
T ss_pred             cCeec-ccCC-EEEeCCCEEEEEEEEeecCCCcEEEEEeeeeeeeecCCceeEEEeecCceEEEECCCCHHHCeEEEEEE
Confidence            68897 4777 999999999999999999988655432  31333332222222    2457999999  7999999999


Q ss_pred             EecCcceE-EEEEEEEE
Q psy8771         176 ASVLGVIE-TSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~-~~~~l~v~  191 (904)
                      .|..|... ..+.|.|+
T Consensus        80 ~N~~G~~~s~~a~L~Vk   96 (96)
T d2c9aa1          80 RTEGGVGISNYAELVVK   96 (96)
T ss_dssp             EETTEEEEEEEEEEEEC
T ss_pred             EeCCCeEEEEEEEEEEC
Confidence            99999864 45788874

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3.1e-11  Score=97.61  Aligned_cols=91  Identities=20%  Similarity=0.285  Sum_probs=74.6

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE-EecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR-RIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      |++|. +.+...+.+++.|+|.++...++.+.+|.|+|+..+...+... ......++.|.+|.|++.|.|+|+|+|..|
T Consensus         1 P~~P~-~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   79 (94)
T d2dn7a1           1 PGRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAG   79 (94)
T ss_dssp             CCCCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEETTE
T ss_pred             CCCCc-EeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEEcCCCccEEEEEccCCeeEEEEEEEEEcCCc
Confidence            34565 6677889999999999998888999999999999877666433 345567999999999999999999999999


Q ss_pred             CCCCCCCeeEEecC
Q psy8771         700 EGATTPPIPVRTKQ  713 (904)
Q Consensus       700 ~~~~s~~~~~~t~~  713 (904)
                      .|.++. ..+.|.+
T Consensus        80 ~g~~s~-~~~~T~e   92 (94)
T d2dn7a1          80 LGEEFE-KEIRTPE   92 (94)
T ss_dssp             EEEEEE-EEEECCC
T ss_pred             CCCCcc-EEEeeCC
Confidence            998774 4555543

>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=99.20  E-value=3.5e-11  Score=97.55  Aligned_cols=82  Identities=16%  Similarity=0.295  Sum_probs=65.1

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC--ceee----cceEEEEeee--cCCeEEEEEEE
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD--KLPV----GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--~~~~----~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      |.+.  +.+ +.+.+|+++.|.|.+.|.|.|.|.|+|+ +..+....  ++..    ...+|.|.++  +|+|.|+|.|.
T Consensus         6 p~~~--~~~-~~~~~G~~v~l~C~~~g~P~~~v~W~k~-g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~   81 (97)
T d1biha3           6 PQYV--SKD-MMAKAGDVTMIYCMYGSNPMGYPNYFKN-GKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVD   81 (97)
T ss_dssp             EEEE--CCS-EEEETTSCEEEEEEEECSSCCCCEEEET-TEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEEC
T ss_pred             CeeC--CCC-EEEecCCeEEEEEEEEEecCCEEEEEEe-eeeccccceeeeeeeeecCCCEEEEEeccccccEEEEEEEE
Confidence            4444  345 9999999999999999999999999999 66664432  2321    3458999999  69999999999


Q ss_pred             ecCcceE-EEEEEEE
Q psy8771         177 SVLGVIE-TSTIVKV  190 (904)
Q Consensus       177 n~~g~~~-~~~~l~v  190 (904)
                      |..|... .++.|.|
T Consensus        82 N~~G~~~s~s~~L~V   96 (97)
T d1biha3          82 NGVGKPQKHSLKLTV   96 (97)
T ss_dssp             CSSSSCEEEEEEEEE
T ss_pred             ECCCcEEEEEEEEEE
Confidence            9999854 4677776

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=1.5e-11  Score=101.12  Aligned_cols=96  Identities=22%  Similarity=0.315  Sum_probs=78.2

Q ss_pred             CCCCCCCcEEEecCCCEEEEEecCCCCCCC--CccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEE
Q psy8771         716 PGAPPQNVSCEPLSSTSIRISWEPPPVERS--NGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWV  792 (904)
Q Consensus       716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~--~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V  792 (904)
                      |..||.++.+..++.+++.|+|++|.....  .+.+.+|.|+++..+.....  ..... ....++|.||.|++.|.|+|
T Consensus         1 P~~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~t~Y~~~V   78 (100)
T d1x5ja1           1 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK--YKNANATTLSYLVTGLKPNTLYEFSV   78 (100)
T ss_dssp             CCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC--CEECCBCSSEEEEESCCTTCEECCEE
T ss_pred             CCCCCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcce--eEecCCCccEEEECCCCCCCEEEEEE
Confidence            455789999999999999999998753222  24667899998877654442  33344 77889999999999999999


Q ss_pred             EEeeCCCCCCCCCcEEeecCC
Q psy8771         793 LAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       793 ~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      +|.|..|.|++|.++.++|.+
T Consensus        79 ~a~n~~g~s~~S~~~~~~T~e   99 (100)
T d1x5ja1          79 MVTKGRRSSTWSMTAHGTTFE   99 (100)
T ss_dssp             EEECSSCBCCCCCCCCEECCC
T ss_pred             EEEeCCcCcCCCCeEEEEecc
Confidence            999999999999999999864

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=4.3e-11  Score=96.29  Aligned_cols=83  Identities=22%  Similarity=0.332  Sum_probs=67.9

Q ss_pred             CCCCCCCcEEEecCC-CEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771         716 PGAPPQNVSCEPLSS-TSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVL  793 (904)
Q Consensus       716 p~~~P~~l~~~~~~~-~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~  793 (904)
                      |..||.+|++..... +++.|+|++|.    ++.+++|.|+|+..++.........++ ..+.++|.+|.||+.|.|+|.
T Consensus         1 P~~PP~~l~v~~~~~ts~i~v~W~~p~----~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~   76 (94)
T d1fnfa1           1 PLSPPTNLHLEANPDTGVLTVSWERST----TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVY   76 (94)
T ss_dssp             CCCCCEEEEEEECSSSSCEEEEEECCS----CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEE
T ss_pred             CCCcCcCcEEEEecCCCEEEEEeeCCC----CCCeeEEEEEEEEecccCceEEEEEeCCCccEEEECCCCCCCEEEEEEE
Confidence            456899999988765 56999999883    234899999999887655555566666 889999999999999999999


Q ss_pred             EeeCCCCCC
Q psy8771         794 AGTSIGDGP  802 (904)
Q Consensus       794 a~~~~g~g~  802 (904)
                      |.+..|.|.
T Consensus        77 a~~~~g~s~   85 (94)
T d1fnfa1          77 TVKDDKESV   85 (94)
T ss_dssp             EEETTEECC
T ss_pred             EEcCCCEeC
Confidence            999888653

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=3.3e-11  Score=99.65  Aligned_cols=93  Identities=27%  Similarity=0.345  Sum_probs=72.9

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEe--ecCceEEEEcCCCCCCeEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQV--VDNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      .|+.+|.++.+..++.++|.|+|++|...+| .+.+|.++++.....   .|....  ......+.+.+|.|++.|.|+|
T Consensus         1 ~Pp~pP~~p~~~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV   77 (104)
T d1bpva_           1 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNG---RWLKANFSNILENEFTVSGLTEDAAYEFRV   77 (104)
T ss_dssp             CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSC---CCEECCCSCCCSSEEEECSCCSSCCEEEEE
T ss_pred             CCCCCCCCCEEEEecCCEEEEEEEeccccCcceEEEEEEEeeccccc---ceeEEEeeccceeEEEEcCCCCCCEEEEEE
Confidence            3678899999999999999999999866555 789999999987643   232222  2456789999999999999999


Q ss_pred             EEEeCCCC-CCCCCcEEEec
Q psy8771         557 QAFTSVGP-GPLSAPVLVKT  575 (904)
Q Consensus       557 ~a~~~~g~-~~~S~~~~~~t  575 (904)
                      +|+|..|. |++|......+
T Consensus        78 ~A~n~~G~~s~~S~~s~~vt   97 (104)
T d1bpva_          78 IAKNAAGAISPPSEPSDAIT   97 (104)
T ss_dssp             EEECTTSCEEEEEEEEEEEC
T ss_pred             EEEECCCCCCCCcCCCCCEE
Confidence            99999996 56666554433

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=5.3e-11  Score=96.41  Aligned_cols=80  Identities=28%  Similarity=0.333  Sum_probs=55.6

Q ss_pred             CCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccce--EEecccceEEEeCCCCCcEEEEEEEEEcCCCC
Q psy8771         623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHH--RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  700 (904)
Q Consensus       623 ~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~--~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~  700 (904)
                      +|.+|++.+++.+++.|+|.++  .++.+.+|+|+|+..+...+..  ......+++.|.||+|++.|.|+|+|++..|.
T Consensus         8 ~P~~l~v~~~t~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~a~~~~g~   85 (95)
T d2fnba_           8 QLTDLSFVDITDSSIGLRWTPL--NSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGE   85 (95)
T ss_dssp             CCTTCEEECCCSSCEEEECCCC--CCSSCCEEEEEEEEETSCCEEEEEECCSSCSEEEECCCCTTSEEEEEEEEEETTEE
T ss_pred             cCCCeEEEEEcCCEEEEEEEec--CCceEEeEEEEEEEeeccceEEEEEeCCCCeEEEEecccCCEEEEEEEEEEeCCcE
Confidence            3444444444444444444433  2456899999999877655432  23445679999999999999999999999998


Q ss_pred             CCCC
Q psy8771         701 GATT  704 (904)
Q Consensus       701 ~~~s  704 (904)
                      |.++
T Consensus        86 s~p~   89 (95)
T d2fnba_          86 SAPT   89 (95)
T ss_dssp             CCCC
T ss_pred             eCCE
Confidence            8766

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.18  E-value=4.9e-11  Score=94.62  Aligned_cols=86  Identities=28%  Similarity=0.379  Sum_probs=72.4

Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCC
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG  701 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~  701 (904)
                      .+|.+|++.+++.+++.|+|.++.   +.+.+|.|.|+..+............+.+.|.+|.|++.|.|+|+|++..|.|
T Consensus         1 DaP~~l~v~~~t~~sv~v~W~~p~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s   77 (87)
T d1qr4a1           1 DNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRHKS   77 (87)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESSSCBC
T ss_pred             CcCcCcEEEEecCCEEEEEEECCC---CCcceeEEEeecCCcceeEEeCCCCcCEEEECCCCcCCEEEEEEEEEcCCCCc
Confidence            368999999999999999999864   56899999999887665555555677899999999999999999999999988


Q ss_pred             CCCCCeeEEe
Q psy8771         702 ATTPPIPVRT  711 (904)
Q Consensus       702 ~~s~~~~~~t  711 (904)
                      .++ .+.++|
T Consensus        78 ~~~-~~~~~T   86 (87)
T d1qr4a1          78 KPT-TIKGST   86 (87)
T ss_dssp             CCE-EEEEEC
T ss_pred             cCE-EEEEEc
Confidence            765 455555

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=3.8e-11  Score=100.82  Aligned_cols=92  Identities=22%  Similarity=0.301  Sum_probs=71.1

Q ss_pred             CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEE
Q psy8771         578 GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY  657 (904)
Q Consensus       578 ~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~  657 (904)
                      .+|.+|.++++.. ..+++.|+|.++..                                         .++.+.+|.|+
T Consensus        19 ~vP~~P~~~~~~~-~~~si~v~W~~p~~-----------------------------------------~~g~i~~Y~i~   56 (113)
T d1x5ia1          19 RVPEVPSSLHVRP-LVTSIVVSWTPPEN-----------------------------------------QNIVVRGYAIG   56 (113)
T ss_dssp             SCCCSCSEEEEEE-ETTEEEEEEECCSC-----------------------------------------TTBCCCEEEEE
T ss_pred             CCCCCCEeeeeee-CCCEEEEEEEcccc-----------------------------------------CCccEEEEEEE
Confidence            3567788888765 45688888887765                                         56678888888


Q ss_pred             EEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEec
Q psy8771         658 WNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK  712 (904)
Q Consensus       658 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~  712 (904)
                      |+..+............+.++|.+|.+++.|.|+|+|+|..|.|.++ ...++|.
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~~-~~~~~T~  110 (113)
T d1x5ia1          57 YGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPL-YESAVTR  110 (113)
T ss_dssp             ECSSCGGGEEEECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCC-CCCEECC
T ss_pred             eeeccccceeeeeeCCccEEEEeccccCcEEEEEEEEECCCcCCCCe-eeEEEeC
Confidence            88766555554555567899999999999999999999999999765 3456664

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=1.7e-11  Score=104.81  Aligned_cols=99  Identities=19%  Similarity=0.294  Sum_probs=77.0

Q ss_pred             ecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCcc----E----------EEEec-Ccc
Q psy8771         711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA----S----------IVTLK-NQT  775 (904)
Q Consensus       711 t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~----~----------~~~~~-~~~  775 (904)
                      |...+|. +|.++.+.. +.+++.|+|++|  ...+|.+.+|.|+|+.........    .          ...+. ...
T Consensus         3 ~~~~~P~-aP~~v~v~~-~~~si~l~W~~P--~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (123)
T d1wfta_           3 SGSSGPG-APSTVRISK-NVDGIHLSWEPP--TSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQL   78 (123)
T ss_dssp             CSSSCCC-CCEEEEEEE-CSSEEEEEEECC--SSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHH
T ss_pred             CCCCCCc-CCcccEEEe-CCCEEEEEecCc--hhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCcc
Confidence            5566777 689999876 688999999998  467899999999998875432210    0          11222 456


Q ss_pred             eEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771         776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE  813 (904)
Q Consensus       776 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~  813 (904)
                      .+.|.+|++++.|.|+|+|.|..|.|++|+...++|..
T Consensus        79 ~~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~  116 (123)
T d1wfta_          79 ANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNS  116 (123)
T ss_dssp             TTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSC
T ss_pred             EEEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecC
Confidence            67789999999999999999999999999988887743

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.18  E-value=4.6e-11  Score=96.34  Aligned_cols=87  Identities=20%  Similarity=0.277  Sum_probs=70.5

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEE-Eec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV-TLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~-~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      +|.+|++..++.+++.|+|++|.     +.+.+|.|+|+...+........ ... ..+.++|.+|.|++.|.|+|+|.+
T Consensus         3 aP~~l~v~~~~~~sv~v~W~~p~-----~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~   77 (92)
T d1tdqa2           3 APKNLRVGSRTATSLDLEWDNSE-----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVM   77 (92)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEE
T ss_pred             cCcCCEEEEecCCEEEEEEEecC-----CcccceEEEEEEcCCCcceeeEEEecCCCeeEEEECCccCCCEEEEEEEEEe
Confidence            58999999999999999999883     45889999999876544432222 223 678899999999999999999999


Q ss_pred             CCCCCCCCCcEEeec
Q psy8771         797 SIGDGPSSYPITIRT  811 (904)
Q Consensus       797 ~~g~g~~s~~~~~~t  811 (904)
                      ..|.|.++ .+.++|
T Consensus        78 ~~g~s~p~-~~~~~T   91 (92)
T d1tdqa2          78 NSKQSIPA-TMNART   91 (92)
T ss_dssp             TTEECCCE-EEEEEC
T ss_pred             CCCEecCE-EEEEEC
Confidence            99998766 466666

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1e-12  Score=108.00  Aligned_cols=97  Identities=21%  Similarity=0.386  Sum_probs=79.6

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a  558 (904)
                      .|+..|.++++..++.+++.|+|++|...+|.+.+|+|+|+.........+..... .....+.+.+|++++ |.|+|+|
T Consensus         3 ~~~d~P~~v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t-Y~~rV~A   81 (102)
T d2dtge1           3 KADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPGN-YSVRIRA   81 (102)
T ss_dssp             CCCCCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSSE-ECCCCCE
T ss_pred             CCCCCCCCCEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeeeeecccceEEEEEeccceee-EEEEEEE
Confidence            56688888999889999999999999888999999999999876443333322222 455668999999985 9999999


Q ss_pred             EeCCCCCCCCCcEEEecCC
Q psy8771         559 FTSVGPGPLSAPVLVKTQQ  577 (904)
Q Consensus       559 ~~~~g~~~~S~~~~~~t~~  577 (904)
                      +|..|.|++|..+.|.+..
T Consensus        82 ~n~~G~g~~S~~v~f~~~e  100 (102)
T d2dtge1          82 TSLAGNGSWTEPTYFYVTD  100 (102)
T ss_dssp             EETTBCCCCCCCCEECCCC
T ss_pred             EcCCccCCCCCCEEEEccC
Confidence            9999999999999998854

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.6e-11  Score=102.13  Aligned_cols=92  Identities=17%  Similarity=0.227  Sum_probs=75.4

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      .||.++.+.. +.++|.|+|++|  ...++++.+|.|+|+..+.. +......+. ..+.++|.+|.+++.|.|+|+|+|
T Consensus         9 sPP~~~~~~~-t~~si~l~W~pp--~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n   84 (108)
T d1v5ja_           9 SPPRGLVAVR-TPRGVLLHWDPP--ELVPKRLDGYVLEGRQGSQG-WEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFA   84 (108)
T ss_dssp             CCCEEEEEEE-CSSSEEEEEECC--SCCSSCCCBEEEEEEETTCC-CEEEEEEECSSCCEEECCCCCTTSCEECCBEEEE
T ss_pred             CcCCCeEEEE-cCCEEEEEEEec--ccCCCceeEEEEEeeeeeee-eeeccccccceeeeEEEEeccCCcEEEEEEEEEe
Confidence            3789998755 788999999988  45678899999999986543 323333444 788999999999999999999999


Q ss_pred             CCCCCCCCCcEEeecCC
Q psy8771         797 SIGDGPSSYPITIRTHE  813 (904)
Q Consensus       797 ~~g~g~~s~~~~~~t~~  813 (904)
                      ..|.|++|+.+.++|..
T Consensus        85 ~~g~s~~S~~~~~~T~~  101 (108)
T d1v5ja_          85 GSFVSDPSNTANVSTSG  101 (108)
T ss_dssp             TTEEEEECSCCCCCCSS
T ss_pred             CCCEeCCcCceEEECCC
Confidence            99999999988888754

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=2.7e-11  Score=100.70  Aligned_cols=96  Identities=19%  Similarity=0.266  Sum_probs=76.0

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      ..+.||.++.+. .+.++|.|+|++|.+.++.+.+|.|+|+..... +...........+.+.+.+|.+++.|.|+|+|+
T Consensus         6 s~~sPP~~~~~~-~t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~   83 (108)
T d1v5ja_           6 SGLSPPRGLVAV-RTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQG-WEVLDPAVAGTETELLVPGLIKDVLYEFRLVAF   83 (108)
T ss_dssp             CCCCCCEEEEEE-ECSSSEEEEEECCSCCSSCCCBEEEEEEETTCC-CEEEEEEECSSCCEEECCCCCTTSCEECCBEEE
T ss_pred             CCCCcCCCeEEE-EcCCEEEEEEEecccCCCceeEEEEEeeeeeee-eeeccccccceeeeEEEEeccCCcEEEEEEEEE
Confidence            345789999875 477899999999988888999999999986532 111212223567789999999999999999999


Q ss_pred             eCCCCCCCCCcEEEecCC
Q psy8771         560 TSVGPGPLSAPVLVKTQQ  577 (904)
Q Consensus       560 ~~~g~~~~S~~~~~~t~~  577 (904)
                      |..|.|++|..+.++|..
T Consensus        84 n~~g~s~~S~~~~~~T~~  101 (108)
T d1v5ja_          84 AGSFVSDPSNTANVSTSG  101 (108)
T ss_dssp             ETTEEEEECSCCCCCCSS
T ss_pred             eCCCEeCCcCceEEECCC
Confidence            999999999887777643

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=6.5e-11  Score=97.13  Aligned_cols=65  Identities=20%  Similarity=0.254  Sum_probs=53.9

Q ss_pred             CceeeEEEEEEeCCccccc-eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771         649 ENIISYELYWNDTYAKAKH-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ  713 (904)
Q Consensus       649 ~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~  713 (904)
                      ....+|.|+|+..+..... .........+.|.||.|++.|.|+|+|+|..|.|.+|..+.++|.+
T Consensus        34 ~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~e   99 (100)
T d1x5ja1          34 TDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE   99 (100)
T ss_dssp             CSSCEEEEEECBSSSSSCCCEECCBCSSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCC
T ss_pred             eeEEEEEEEeeecCCCcceeEecCCCccEEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEecc
Confidence            4667899999887666553 3334456789999999999999999999999999999999998875

>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1, ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Intercellular adhesion molecule-1, ICAM-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=8.3e-12  Score=97.13  Aligned_cols=72  Identities=24%  Similarity=0.234  Sum_probs=57.7

Q ss_pred             CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         111 PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      |.+ +++.+|+++.|.|.+.|.|.|.|+|+|+ +..+....+       +..-..+|+|.|+|.|.|..|+.+..+.|.|
T Consensus        11 p~~-~~~~~G~~~~l~C~a~G~P~P~v~W~k~-g~~~~~~~~-------~~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V   81 (84)
T d2oz4a3          11 PGN-WTWPENSQQTPMCQAWGNPLPELKCLKD-GTFPLPIGE-------SVTVTRDLEGTYLCRARSTQGEVTREVTVNV   81 (84)
T ss_dssp             CSE-EEEETTCEECCCCCCEEESCCEEEEEET-TTEECCTTS-------CEECCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred             Ccc-EEEeCCCEEEEEEEEeEcCccEEEEEEe-eccceeeee-------eeccccCCCCEEEEEEEcCCCEEEEEEEEEE
Confidence            455 8999999999999999999999999999 443332211       1112237999999999999999999998888


Q ss_pred             E
Q psy8771         191 Q  191 (904)
Q Consensus       191 ~  191 (904)
                      .
T Consensus        82 ~   82 (84)
T d2oz4a3          82 L   82 (84)
T ss_dssp             E
T ss_pred             E
Confidence            7

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.7e-11  Score=101.41  Aligned_cols=94  Identities=18%  Similarity=0.251  Sum_probs=72.2

Q ss_pred             CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEE
Q psy8771         716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLA  794 (904)
Q Consensus       716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a  794 (904)
                      |..||.++.+..++.++|.|+|++|. +..+..+.+|.++++......+.. ..... ....+++.+|++++.|.|+|+|
T Consensus         2 Pp~pP~~p~~~~~t~~sv~lsW~~P~-~~~g~~i~~y~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~frV~A   79 (104)
T d1bpva_           2 PIDPPGKPVPLNITRHTVTLKWAKPE-YTGGFKITSYIVEKRDLPNGRWLK-ANFSNILENEFTVSGLTEDAAYEFRVIA   79 (104)
T ss_dssp             CCCCCCCCEEEEEETTEEEEECCCCS-CCTTCCCSCCEEEEEETTSCCCEE-CCCSCCCSSEEEECSCCSSCCEEEEEEE
T ss_pred             CCCCCCCCEEEEecCCEEEEEEEecc-ccCcceEEEEEEEeecccccceeE-EEeeccceeEEEEcCCCCCCEEEEEEEE
Confidence            55578899999999999999999885 233457899999999877554421 11122 7788999999999999999999


Q ss_pred             eeCCCC-CCCCCcEEeec
Q psy8771         795 GTSIGD-GPSSYPITIRT  811 (904)
Q Consensus       795 ~~~~g~-g~~s~~~~~~t  811 (904)
                      .|..|. |++|......|
T Consensus        80 ~n~~G~~s~~S~~s~~vt   97 (104)
T d1bpva_          80 KNAAGAISPPSEPSDAIT   97 (104)
T ss_dssp             ECTTSCEEEEEEEEEEEC
T ss_pred             EECCCCCCCCcCCCCCEE
Confidence            999996 66666554333

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=8.3e-11  Score=97.23  Aligned_cols=92  Identities=18%  Similarity=0.118  Sum_probs=67.1

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      .|..+.+...+.++|.|+|.++.  ..++.+.+|.|+|+...+........... ..+.++|.+|.+++.|.|+|+|.|.
T Consensus         9 ~P~~p~~~~~~~~~v~l~W~pp~--~~~~~~~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frVra~n~   86 (105)
T d2d9qb2           9 MDPSPEAAPPQAGCLQLSWEPWQ--PGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRW   86 (105)
T ss_dssp             CCC-------CCSCEEEEEECCG--GGTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEEC
T ss_pred             CCCCCEeecCCCCeEEEEEcCCC--CCCceeEEEEEEEEecCCccceeeeecccCCcceeEEecccCCeEEEEEEEEEeC
Confidence            35567777888999999999984  56788999999999876544433333334 7788999999999999999999999


Q ss_pred             CCCCC---CCCcEEeecC
Q psy8771         798 IGDGP---SSYPITIRTH  812 (904)
Q Consensus       798 ~g~g~---~s~~~~~~t~  812 (904)
                      .|.|.   +|..+.++|.
T Consensus        87 ~g~G~~S~wS~~~~~~t~  104 (105)
T d2d9qb2          87 PLPGHWSDWSPSLELRTT  104 (105)
T ss_dssp             SSCCCCCCCCCCEEECCC
T ss_pred             CCCCCCcCCCCCEEEeCC
Confidence            99865   5557777664

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=7.7e-11  Score=95.22  Aligned_cols=88  Identities=23%  Similarity=0.393  Sum_probs=71.1

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE-eecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ-VVDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      .+|. +.+...+.+++.|+|++|.+.+|.+.+|.|+|+..+..   .|... .....+++.+.+|.|++.|.|+|+|+|.
T Consensus         2 ~~P~-~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~---~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   77 (94)
T d2dn7a1           2 GRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEA---RPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNR   77 (94)
T ss_dssp             CCCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCS---SCEEEEEETTCCEEEEECCCTTCEEEEEEEEEET
T ss_pred             CCCc-EeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCC---CcEEEEcCCCccEEEEEccCCeeEEEEEEEEEcC
Confidence            5665 55677888999999999988888999999999987643   23333 3467788999999999999999999999


Q ss_pred             CCCCCCCCcEEEec
Q psy8771         562 VGPGPLSAPVLVKT  575 (904)
Q Consensus       562 ~g~~~~S~~~~~~t  575 (904)
                      .|.|+.|.. .+.|
T Consensus        78 ~G~g~~s~~-~~~T   90 (94)
T d2dn7a1          78 AGLGEEFEK-EIRT   90 (94)
T ss_dssp             TEEEEEEEE-EEEC
T ss_pred             CcCCCCccE-EEee
Confidence            999887753 4444

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=5.4e-11  Score=94.92  Aligned_cols=80  Identities=19%  Similarity=0.321  Sum_probs=67.0

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      .+|.+|++..++.+++.|+|++|.     +.+.+|.|+|+..+...+. ....+. ..+.+.|.+|+|++.|.|+|+|.+
T Consensus         2 d~P~~l~v~~vt~~sv~l~W~~p~-----~~~~~Y~i~~~~~~~~~~~-~~~~v~~~~~~~~i~~L~p~t~Y~~~V~a~~   75 (89)
T d1fnfa3           2 DSPTGIDFSDITANSFTVHWIAPR-----ATITGYRIRHHPEHFSGRP-REDRVPHSRNSITLTNLTPGTEYVVSIVALN   75 (89)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECCS-----SCCSEEEEEEECSCCSSCC-EEEEEETTCCEEEEESCCTTCEEEEEEEEEE
T ss_pred             ccCcCCEEEEecCCEEEEEEEeCC-----CEEeeEEEEEEECCCCCce-EEEEECCCccEEEECCCcccCEEEEEEEEEc
Confidence            368999999999999999999883     4588999999987655443 344455 889999999999999999999999


Q ss_pred             CCCCCCC
Q psy8771         797 SIGDGPS  803 (904)
Q Consensus       797 ~~g~g~~  803 (904)
                      ..|.|++
T Consensus        76 ~~g~s~p   82 (89)
T d1fnfa3          76 GREESPL   82 (89)
T ss_dssp             TTEECCC
T ss_pred             CCcCcCC
Confidence            8887654

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=7.8e-11  Score=99.56  Aligned_cols=86  Identities=26%  Similarity=0.278  Sum_probs=70.3

Q ss_pred             EecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCC--ccEEEEec--CcceEEecCCCCCceEEEEEEEeeCCCCC
Q psy8771         726 EPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS--EASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSIGDG  801 (904)
Q Consensus       726 ~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~--~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g  801 (904)
                      ..+++++|.|+|+++.   .++.+.+|.|+|+.......  ......+.  ..+++.|.+|+|++.|.|+|+|+|..|.|
T Consensus        25 ~~~s~tsi~v~W~~p~---~~~~i~gY~v~y~~~~~~~~~~~~~~~~v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G  101 (120)
T d1ujta_          25 VVLTPTTVQVTWTVDR---QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQG  101 (120)
T ss_dssp             CCCBTTEEEEEEEESS---CCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCC
T ss_pred             EEeCCCeEEEEecCCC---CCCcEEEEEEEeeecccCCCCcceEEEEeccCceeEEEECCCCCCCEEEEEEEEEeCCcCc
Confidence            3457899999999883   46789999999998754332  22333333  78899999999999999999999999999


Q ss_pred             CCCCcEEeecCCC
Q psy8771         802 PSSYPITIRTHED  814 (904)
Q Consensus       802 ~~s~~~~~~t~~~  814 (904)
                      ++|+.+.++|.++
T Consensus       102 ~~S~~~~~~T~e~  114 (120)
T d1ujta_         102 MDSESKTVRTTEE  114 (120)
T ss_dssp             CCCCCEEEEECSS
T ss_pred             CCCCCEEEEeCCC
Confidence            9999999999874

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=8.2e-11  Score=94.19  Aligned_cols=87  Identities=18%  Similarity=0.324  Sum_probs=72.1

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      ||.+|.+..++.+++.|+|++|.     +.+.+|.|+|........... ..+. ..+.++|.+|.|++.|.|+|+|.|.
T Consensus         2 pP~~l~~~~v~~~si~l~W~~p~-----~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~   75 (90)
T d1fnha1           2 APTDLKFTQVTPTSLSAQWTPPN-----VQLTGYRVRVTPKEKTGPMKE-INLAPDSSSVVVSGLMVATKYEVSVYALKD   75 (90)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEESSSCSCCCE-EEECTTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCEEEEEecCCEEEEEEEccc-----eeccceEEEEEeeeCCCceEE-EEeCCCCeEEEEecccCceEEEEEEEEEeC
Confidence            58999999999999999999883     457889999988776554333 3344 8889999999999999999999999


Q ss_pred             CCCCCCCCcEEeecC
Q psy8771         798 IGDGPSSYPITIRTH  812 (904)
Q Consensus       798 ~g~g~~s~~~~~~t~  812 (904)
                      .|.|..+. ..+.|.
T Consensus        76 ~g~s~~~~-~~~~T~   89 (90)
T d1fnha1          76 TLTSRPAQ-GVVTTL   89 (90)
T ss_dssp             TEECCCEE-EEEECC
T ss_pred             CCCcCCEe-EEEEcC
Confidence            99998775 556664

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=7.4e-11  Score=94.35  Aligned_cols=86  Identities=17%  Similarity=0.293  Sum_probs=70.6

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      +|.+|++..++.+++.|+|++|.     +.+.+|.|+|...++.... ....+. +.+.++|.+|.|++.|.|+|+|.+.
T Consensus         4 ~P~~l~v~~~s~~s~~l~W~~p~-----~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   77 (90)
T d1tena_           4 APSQIEVKDVTDTTALITWFKPL-----AEIDGIELTYGIKDVPGDR-TTIDLTEDENQYSIGNLKPDTEYEVSLISRRG   77 (90)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEETTCTTCC-EEEEEETTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCcEEEEecCCEEEEEEEeCc-----eEeccEEEEEEEcCCCcee-EEEEecCCcceeeEeeecCCCEEEEEEEEEeC
Confidence            68999999999999999999873     4588999999987654433 344555 8899999999999999999999999


Q ss_pred             CCCCCCCCcEEeec
Q psy8771         798 IGDGPSSYPITIRT  811 (904)
Q Consensus       798 ~g~g~~s~~~~~~t  811 (904)
                      .|.|.++. ..|.|
T Consensus        78 ~g~s~~~~-~~~~T   90 (90)
T d1tena_          78 DMSSNPAK-ETFTT   90 (90)
T ss_dssp             TEECCCEE-EEEEC
T ss_pred             CCEeCCEE-EEEEC
Confidence            99887653 44544

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.3e-10  Score=95.95  Aligned_cols=90  Identities=13%  Similarity=0.202  Sum_probs=66.0

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe--ecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV--VDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      .|..+.+...+.++|.|+|++|...++.+.+|.|+|+...+.  ..|....  ......+.|.+|.|++.|.|+|+|.|.
T Consensus         9 ~P~~p~~~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frVra~n~   86 (105)
T d2d9qb2           9 MDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGE--ASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRW   86 (105)
T ss_dssp             CCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSC--CCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEEC
T ss_pred             CCCCCEeecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCc--cceeeeecccCCcceeEEecccCCeEEEEEEEEEeC
Confidence            445667778889999999999887778899999999987644  3454443  356778999999999999999999999


Q ss_pred             CCCCCCCC---cEEEec
Q psy8771         562 VGPGPLSA---PVLVKT  575 (904)
Q Consensus       562 ~g~~~~S~---~~~~~t  575 (904)
                      .|.|.+|+   .+.++|
T Consensus        87 ~g~G~~S~wS~~~~~~t  103 (105)
T d2d9qb2          87 PLPGHWSDWSPSLELRT  103 (105)
T ss_dssp             SSCCCCCCCCCCEEECC
T ss_pred             CCCCCCcCCCCCEEEeC
Confidence            99876554   455544

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=7.1e-11  Score=97.46  Aligned_cols=89  Identities=26%  Similarity=0.429  Sum_probs=73.4

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCC--CcceEEEee--cCceEEEEcCCCCCCeEEEEEE
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLP--MSAWETQVV--DNNQLTTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V~  557 (904)
                      |++|.++++...+.+++.|+|.+|.+.+|.+.+|.|+|+......  ...|.....  ....++.+.+|+|++.|.|+|+
T Consensus         3 P~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~   82 (103)
T d1qg3a2           3 PSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVK   82 (103)
T ss_dssp             CCCCCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEECCTTCCEEEECCCCTTCCEEEEEE
T ss_pred             CccCCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEecCCCceEEEEeecCCCCEEEEEEE
Confidence            378999999999999999999999888899999999998765332  222333322  5667899999999999999999


Q ss_pred             EEeCCCCCCCCCc
Q psy8771         558 AFTSVGPGPLSAP  570 (904)
Q Consensus       558 a~~~~g~~~~S~~  570 (904)
                      |+|..|.|+.+..
T Consensus        83 A~n~~G~g~~s~~   95 (103)
T d1qg3a2          83 ARNGAGWGPEREA   95 (103)
T ss_dssp             EEETTEECCCEEE
T ss_pred             EEcCCccCCCccc
Confidence            9999999877653

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.15  E-value=5.7e-11  Score=98.57  Aligned_cols=85  Identities=24%  Similarity=0.376  Sum_probs=63.7

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-------------cCceEEEEcCCCCCC
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-------------DNNQLTTISDLTPHT  550 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~L~p~t  550 (904)
                      ||..+.+..++.+++.|+|.+|.+.++.|.+|.|+|+.....  ..|.....             .....+.+.+|+|++
T Consensus         2 PP~~p~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t   79 (107)
T d2ic2a1           2 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKR--KNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQH   79 (107)
T ss_dssp             CCCCCEEEECC---EEEEEEEECCSSCCEEEEEEEEEECC-----CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSE
T ss_pred             cCcCCEEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCC--CcceEEEeeeeccceeeeecccceeEEEECCCcCCc
Confidence            455667888999999999999987778999999999876532  33432211             234578999999999


Q ss_pred             eEEEEEEEEeCCCCCCCCCc
Q psy8771         551 IYTIRVQAFTSVGPGPLSAP  570 (904)
Q Consensus       551 ~Y~~~V~a~~~~g~~~~S~~  570 (904)
                      .|.|+|+|.|..|.|.+|..
T Consensus        80 ~Y~frV~A~N~~G~s~~S~~   99 (107)
T d2ic2a1          80 TYRFRILAVYSNNDNKESNT   99 (107)
T ss_dssp             EEEEEEEEEETTSCEEECCC
T ss_pred             EEEEEEEEEcCCCCCCCCCC
Confidence            99999999999999887754

>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.15  E-value=1.6e-10  Score=93.74  Aligned_cols=84  Identities=19%  Similarity=0.354  Sum_probs=64.4

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCC-CeEEEeeCCccccC-CCCceee-----cceEEEEeee--cCCeEEEEEEEe
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPM-PFVKWRKGQNIELT-PDDKLPV-----GRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~k~~~~~~~-~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      +...|.+ ..+..|+++.|.|.+.|.|. |.|.|+|+++..+. ...++..     ....|.|.++  +|+|.|+|.|.|
T Consensus         3 V~i~P~~-~~v~~G~~~~l~C~v~g~p~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N   81 (97)
T d1epfa1           3 VDIVPSQ-GEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTA   81 (97)
T ss_dssp             EEEESSS-EEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred             EEEECCC-EEEccCCcEEEEEEEEeccCCCEEEEEEeeeeeeeeccccEEEEeecCcceEEEcccCchhhceEEEEEEEe
Confidence            3344566 89999999999999999986 79999996455443 3445443     2457999999  699999999999


Q ss_pred             cCcce-EEEEEEEEE
Q psy8771         178 VLGVI-ETSTIVKVQ  191 (904)
Q Consensus       178 ~~g~~-~~~~~l~v~  191 (904)
                      ..|.. ++.+.|.|.
T Consensus        82 ~~G~~~~~tv~l~V~   96 (97)
T d1epfa1          82 EDGTQSEATVNVKIF   96 (97)
T ss_dssp             TTTEEEEEEEEEEEE
T ss_pred             CCCcEEEEEEEEEEE
Confidence            99974 456666664

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.14  E-value=3.1e-10  Score=93.43  Aligned_cols=64  Identities=17%  Similarity=0.223  Sum_probs=55.5

Q ss_pred             CCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCC-CCCCCCeeEEe
Q psy8771         648 GENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE-GATTPPIPVRT  711 (904)
Q Consensus       648 ~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~-~~~s~~~~~~t  711 (904)
                      ++.+..|+|+|+..+...+........+.+.|.+|.+++.|.|+|+|.+..|. |.+|....+.+
T Consensus        38 ~~~~l~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~  102 (103)
T d1f6fb2          38 GWFTMEYEIRLKPEEAEEWEIHFTGHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEM  102 (103)
T ss_dssp             TSSCEEEEEEEEESSCSCCEEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred             CcEEEEEEEEEEeCCCcceeeecccceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeEC
Confidence            45678999999999888776666667789999999999999999999999997 88998887765

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.14  E-value=5.6e-11  Score=98.63  Aligned_cols=84  Identities=18%  Similarity=0.321  Sum_probs=64.4

Q ss_pred             CCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE--------------EecccceEEEeCCCCCcEE
Q psy8771         623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR--------------RIGLVETYSLTGLYPNTLY  688 (904)
Q Consensus       623 ~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~--------------~~~~~~~~~l~~L~p~t~Y  688 (904)
                      ||..+.+..++.++++|+|.++.++++.+.+|.|+|+..+.......              .......++|.+|+|++.|
T Consensus         2 PP~~p~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y   81 (107)
T d2ic2a1           2 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTY   81 (107)
T ss_dssp             CCCCCEEEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEE
T ss_pred             cCcCCEEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEE
Confidence            57778899999999999999998888999999999987654332111              1123458999999999999


Q ss_pred             EEEEEEEcCCCCCCCCCC
Q psy8771         689 YIWLAAQSPRGEGATTPP  706 (904)
Q Consensus       689 ~v~V~a~~~~G~~~~s~~  706 (904)
                      .|+|+|+|..|.|.+|..
T Consensus        82 ~frV~A~N~~G~s~~S~~   99 (107)
T d2ic2a1          82 RFRILAVYSNNDNKESNT   99 (107)
T ss_dssp             EEEEEEEETTSCEEECCC
T ss_pred             EEEEEEEcCCCCCCCCCC
Confidence            999999999999887754

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=6.2e-11  Score=97.83  Aligned_cols=86  Identities=16%  Similarity=0.241  Sum_probs=73.2

Q ss_pred             CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc-----c--eEEecccceEEEeCCCCCcEEEEEE
Q psy8771         620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK-----H--HRRIGLVETYSLTGLYPNTLYYIWL  692 (904)
Q Consensus       620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~-----~--~~~~~~~~~~~l~~L~p~t~Y~v~V  692 (904)
                      .|++|.++++...+.+++.|+|.++...++.+.+|.|+|+.......     .  ........+++|.+|++++.|.|+|
T Consensus         2 ~P~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   81 (103)
T d1qg3a2           2 VPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTV   81 (103)
T ss_dssp             CCCCCCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEECCTTCCEEEECCCCTTCCEEEEE
T ss_pred             cCccCCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEecCCCceEEEEeecCCCCEEEEEE
Confidence            47899999999999999999999999999999999999988765432     1  1223445689999999999999999


Q ss_pred             EEEcCCCCCCCCC
Q psy8771         693 AAQSPRGEGATTP  705 (904)
Q Consensus       693 ~a~~~~G~~~~s~  705 (904)
                      +|+|..|.|+++.
T Consensus        82 ~A~n~~G~g~~s~   94 (103)
T d1qg3a2          82 KARNGAGWGPERE   94 (103)
T ss_dssp             EEEETTEECCCEE
T ss_pred             EEEcCCccCCCcc
Confidence            9999999997764

>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=3.7e-11  Score=104.50  Aligned_cols=88  Identities=24%  Similarity=0.427  Sum_probs=67.4

Q ss_pred             CCCCeEEc-----CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC--------------------------
Q psy8771         102 RVPPQFSI-----PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD--------------------------  150 (904)
Q Consensus       102 ~~~P~~~~-----~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~--------------------------  150 (904)
                      ..||+|..     .|.. +.+.+|+.++|.|.+.|.|.|.|.|+|+ +..+...                          
T Consensus         2 q~PP~i~~~~~~~~~~~-v~v~~G~~v~L~C~v~G~P~p~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (130)
T d1gxea_           2 QEPPKIHLDCPGRIPDT-IVVVAGNKLRLDVPISGDPAPTVIWQKA-ITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLC   79 (130)
T ss_dssp             CBCCCSCCSSSCCCCCE-EEESSSSCCCCEEECCSBSCCEEEEEEE-CCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCC
T ss_pred             CCCCEEECCCCCCCCCC-EEEEcCCeEEEEEEEEEecCCeEEEeeC-CeEccCCccceeeecccccccceeeecCCceee
Confidence            35777642     3344 9999999999999999999999999997 3332211                          


Q ss_pred             ---Cceee----cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         151 ---DKLPV----GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       151 ---~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                         .|+.+    +...|.|.++  +|+|.|+|.|.|..|..++.+.|.|.
T Consensus        80 ~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~  129 (130)
T d1gxea_          80 ETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI  129 (130)
T ss_dssp             SCSSSCEEEEETTEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred             ccCceEEEEECCCEEEEEECcCChhcCEEEEEEEEECCCEEEEEEEEEEE
Confidence               11111    2346999999  69999999999999999999888875

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1e-10  Score=92.89  Aligned_cols=88  Identities=19%  Similarity=0.257  Sum_probs=69.9

Q ss_pred             CCCCcEEEecC--CCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEe
Q psy8771         719 PPQNVSCEPLS--STSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAG  795 (904)
Q Consensus       719 ~P~~l~~~~~~--~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~  795 (904)
                      +|.++.+....  .+++.|+|++|.    .+.+.+|.|+|+..++... .....++ ..+.++|.||+|++.|.|+|.|.
T Consensus         2 aP~~~~vt~~~~~~~s~~vsW~~P~----~~~i~~Y~i~y~~~~~~~~-~~~~~v~~~~~~~~l~gL~P~t~Y~v~v~av   76 (93)
T d1owwa_           2 GPVEVFITETPSQPNSHPIQWNAPQ----PSHISKYILRWRPKNSVGR-WKEATIPGHLNSYTIKGLKPGVVYEGQLISI   76 (93)
T ss_dssp             CCCEEECCCCSSCTTCEEEEEECCS----SSCEEEEEEEEEETTCSSC-CEEEEECSSCCEEEECSCCSSEEEEEEEEEE
T ss_pred             cCcccEEEEccCCCCEEEEEeeccc----ccceeEEEEEEeeccccce-eeeeccCCCccEEEECCcccCcEEEEEEEEE
Confidence            36667776554  489999999984    3569999999998765543 3345566 88999999999999999999999


Q ss_pred             eCCCCCCCCCcEEeecC
Q psy8771         796 TSIGDGPSSYPITIRTH  812 (904)
Q Consensus       796 ~~~g~g~~s~~~~~~t~  812 (904)
                      |..|.|+.+. +.|+|.
T Consensus        77 ~~~G~s~~~~-~~~tT~   92 (93)
T d1owwa_          77 QQYGHQEVTR-FDFTTT   92 (93)
T ss_dssp             ESSSCEEEEE-EEEEEC
T ss_pred             eCCCccCcEE-EEEEec
Confidence            9999987764 667663

>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Interleukin-6 receptor alpha chain, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=3.2e-11  Score=96.12  Aligned_cols=77  Identities=21%  Similarity=0.235  Sum_probs=63.7

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccCCC-CeEEEeeCCccccCCCCcee-ecceEEEEeee--cCCeEEEEEEEe
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPM-PFVKWRKGQNIELTPDDKLP-VGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~k~~~~~~~~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      +.+|.|...+.. +++.+|+++.|.|.+.|.|. ++|+|+|+ +..+....+.. ..+++|.|.++  +|+|.|+|.|.|
T Consensus         4 ~~~P~~~~~~~~-v~~~~G~~v~L~C~~~g~~~~~~i~W~k~-~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n   81 (93)
T d1n26a1           4 RRCPAQEVARGV-LTSLPGDSVTLTCPGVEPEDNATVHWVLR-KPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAG   81 (93)
T ss_dssp             SCCCCCCCCTTE-EEECTTCCEEEECTTSCTTCCSEEEEEEE-CSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEESSS
T ss_pred             CCCCcEEeCCCC-EEEeCCCcEEEEEEeecCCCCceEEEEEc-cccccceeeEEecCCCEEEECCCChhcCEEEEEEECC
Confidence            567888888877 99999999999999999876 59999999 66665555544 46778999999  799999999987


Q ss_pred             cCc
Q psy8771         178 VLG  180 (904)
Q Consensus       178 ~~g  180 (904)
                      ..+
T Consensus        82 ~~~   84 (93)
T d1n26a1          82 RPA   84 (93)
T ss_dssp             SCS
T ss_pred             ccc
Confidence            543

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.14  E-value=1e-10  Score=92.92  Aligned_cols=80  Identities=25%  Similarity=0.414  Sum_probs=70.8

Q ss_pred             CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCC
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPP  281 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~  281 (904)
                      ++|.+|++..++.+++.|+|+++.+.+.+|.|.|...+...............+.|.+|.|+++|.|+|.|.|..|.|.+
T Consensus         2 ~~P~~l~v~~v~~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p   81 (88)
T d1qr4a2           2 GSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEP   81 (88)
T ss_dssp             CCCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEECCC
T ss_pred             cCCcceEEEEecCCEEEEEEEcccEeeceEEEEEEeccCCceEEEEecCCccEEEECCCCCCCEEEEEEEEEeCCCCcCC
Confidence            57999999999999999999999889999999999887665555555666789999999999999999999999998765

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.2e-10  Score=93.82  Aligned_cols=88  Identities=23%  Similarity=0.325  Sum_probs=73.4

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  700 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~  700 (904)
                      ..+|.+|.+.+++.+++.|+|.++   .+.+.+|.|.|+..++...........+++.|.||.|++.|.|+|+|++..|.
T Consensus         2 l~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~   78 (93)
T d2cuma1           2 LEAPRDLEAKEVTPRTALLTWTEP---PVRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQSL   78 (93)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECC---SSCCSEEEEEEECTTSCEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBTTBC
T ss_pred             cCcCCCCEEEEeCCCEEEEEEEcc---ccccccEEEEEEccccccEEEEECCCccEEEEeCccCCCEEEEEEEEEeCCCC
Confidence            468999999999999999999985   35689999999987665555555566789999999999999999999999998


Q ss_pred             CCCCCCeeEEec
Q psy8771         701 GATTPPIPVRTK  712 (904)
Q Consensus       701 ~~~s~~~~~~t~  712 (904)
                      |.++ ...++|.
T Consensus        79 s~~~-~~~~tT~   89 (93)
T d2cuma1          79 LPPV-STSFTTG   89 (93)
T ss_dssp             CCCE-EEEEECC
T ss_pred             CCCE-EEEEEeC
Confidence            8765 3556664

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.13  E-value=6.9e-11  Score=93.40  Aligned_cols=80  Identities=25%  Similarity=0.386  Sum_probs=70.1

Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCC
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG  701 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~  701 (904)
                      .+|.+|++.+++.+++.|+|.++   .+.+.+|.|+|+..++...........+++.|.+|.|++.|.|+|+|++..|+|
T Consensus         2 ~~P~nl~v~~~~~~s~~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s   78 (86)
T d1tdqa3           2 DSPRDLMVTASSETSISLIWTKA---SGPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQS   78 (86)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---CSCCSEEEEEEECSSSCCEEEEEESSCSEEEECCCCTTCCEEEEEEEEETTEEC
T ss_pred             ccCCCCEEEEecCCEEEEEEeCC---CCCccceEEEEecccccceEEEeCCCccEEEECCCccccEEEEEEEEEcCCCEE
Confidence            58999999999999999999985   457999999999887766656666778899999999999999999999998887


Q ss_pred             CCC
Q psy8771         702 ATT  704 (904)
Q Consensus       702 ~~s  704 (904)
                      .++
T Consensus        79 ~p~   81 (86)
T d1tdqa3          79 LES   81 (86)
T ss_dssp             CCE
T ss_pred             CCE
Confidence            654

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=6.2e-11  Score=101.29  Aligned_cols=95  Identities=19%  Similarity=0.320  Sum_probs=73.7

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCc----ceEE----------EeecCceEEEEcCCC
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMS----AWET----------QVVDNNQLTTISDLT  547 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~----~~~~----------~~~~~~~~~~~~~L~  547 (904)
                      |.+|.++.+.. +.+++.|+|.+|.+.+|.+.+|.|+|+........    .+..          ........+.+.+|.
T Consensus         8 P~aP~~v~v~~-~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~   86 (123)
T d1wfta_           8 PGAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDYT   86 (123)
T ss_dssp             CCCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBCS
T ss_pred             CcCCcccEEEe-CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcCCC
Confidence            47899999865 67899999999988889999999999876543221    1111          111233456788999


Q ss_pred             CCCeEEEEEEEEeCCCCCCCCCcEEEecCC
Q psy8771         548 PHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ  577 (904)
Q Consensus       548 p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~  577 (904)
                      |++.|.|+|+|.|..|.|++|....++|..
T Consensus        87 p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~  116 (123)
T d1wfta_          87 SRPAIVFRISAKNEKGYGPATQIRWLQGNS  116 (123)
T ss_dssp             SSCEEEEEEEEBSSSSBCCCEEEEEECCSC
T ss_pred             CCCEEEEEEEEecCCcCCCCCCcEEEEecC
Confidence            999999999999999999999888787743

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1e-10  Score=93.81  Aligned_cols=80  Identities=18%  Similarity=0.439  Sum_probs=67.1

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS  797 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~  797 (904)
                      ||.+|++..++.+++.|+|+++.    ++.+.+|.|+|+..++... .....+. ..+.++|.+|+|++.|.|+|+|.+.
T Consensus         3 pP~~l~~~~~~~~sv~l~W~~p~----~~~~~~y~v~y~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   77 (91)
T d1fnfa2           3 PPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEED-VAELSISPSDNAVVLTNLLPGTEYVVSVSSVYE   77 (91)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCT----TCCCSEEEEEEEETTCTTC-CEEEEECTTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             cCCceEEEEeCCCEEEEEEEecC----CCCcceeEEEEEECCCCcc-EEEEEeCCCceEEEEeceeCCCEEEEEEEEEcC
Confidence            58999999999999999999873    3568899999998776544 3445555 8889999999999999999999998


Q ss_pred             CCCCCC
Q psy8771         798 IGDGPS  803 (904)
Q Consensus       798 ~g~g~~  803 (904)
                      .|.|.+
T Consensus        78 ~g~S~p   83 (91)
T d1fnfa2          78 QHESTP   83 (91)
T ss_dssp             TEECCC
T ss_pred             CCCCCC
Confidence            887653

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=4.3e-12  Score=107.23  Aligned_cols=106  Identities=23%  Similarity=0.355  Sum_probs=77.4

Q ss_pred             eeeecCCCCCCCCCCeEEEe-cCCceEEEEecCCCC------CCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEc
Q psy8771         473 PVRTKQYEPGTAPRDVQVRP-LSSSTMVIQWDEPET------PNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTIS  544 (904)
Q Consensus       473 ~~~t~~~~p~~~p~~l~v~~-~~~~~~~l~W~~p~~------~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~  544 (904)
                      .++|....|+.+|.+|++.. .+.++|.|+|++|..      .++.+.+|++++...     ..+..... .+.+.+.|.
T Consensus         2 ~~~T~~~~pp~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~-----~~~~~~~~~~~~~~~~i~   76 (117)
T d2cspa1           2 EFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQ-----RVAEVIFPTADSTAVELV   76 (117)
T ss_dssp             CCCCCCCCCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSS-----EEEEECCTTCSEEEEESH
T ss_pred             EEEeCCCCCCCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecc-----cceeeeeeccceeeeecc
Confidence            46677778889999999864 566799999999743      123556666543211     11212122 455678899


Q ss_pred             CCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771         545 DLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP  583 (904)
Q Consensus       545 ~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p  583 (904)
                      +|++++.|.|+|+|+|..|.|..|..+.+.|....|+.|
T Consensus        77 ~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t~~~vP~~P  115 (117)
T d2cspa1          77 RLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPPTP  115 (117)
T ss_dssp             HHHHHTCSCBEEEEEESSCCCCCCSCBCCCHHHHSCCCC
T ss_pred             CCCCCcEEEEEEEEEcCCCcCCCCCCEEeeCCCCCCccc
Confidence            999999999999999999999999998888876666655

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.5e-10  Score=93.00  Aligned_cols=83  Identities=19%  Similarity=0.382  Sum_probs=65.8

Q ss_pred             CCCCCCCeEEEecCCc-eEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         481 PGTAPRDVQVRPLSSS-TMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~-~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      |..+|.+|++.....+ +|.|+|++|..  +.+.+|+|+|+...+............+.+++.|.+|.||+.|.|+|+|+
T Consensus         1 P~~PP~~l~v~~~~~ts~i~v~W~~p~~--~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~   78 (94)
T d1fnfa1           1 PLSPPTNLHLEANPDTGVLTVSWERSTT--PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTV   78 (94)
T ss_dssp             CCCCCEEEEEEECSSSSCEEEEEECCSC--SSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEE
T ss_pred             CCCcCcCcEEEEecCCCEEEEEeeCCCC--CCeeEEEEEEEEecccCceEEEEEeCCCccEEEECCCCCCCEEEEEEEEE
Confidence            4578999999887654 59999998743  35899999999876543333334444677899999999999999999999


Q ss_pred             eCCCCC
Q psy8771         560 TSVGPG  565 (904)
Q Consensus       560 ~~~g~~  565 (904)
                      +..|.|
T Consensus        79 ~~~g~s   84 (94)
T d1fnfa1          79 KDDKES   84 (94)
T ss_dssp             ETTEEC
T ss_pred             cCCCEe
Confidence            988864

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.13  E-value=3.8e-10  Score=92.82  Aligned_cols=91  Identities=15%  Similarity=0.321  Sum_probs=72.8

Q ss_pred             CCCCCCeEEE----ecCCceEEEEecCCCC----CCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEE
Q psy8771         482 GTAPRDVQVR----PLSSSTMVIQWDEPET----PNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT  553 (904)
Q Consensus       482 ~~~p~~l~v~----~~~~~~~~l~W~~p~~----~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~  553 (904)
                      |.+|.+|.+.    ....++|.|+|++|..    .++.+..|.|+|+..+.   ..|........+.+.+.+|.+++.|.
T Consensus         3 P~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~---~~~~~~~~~~~~~~~i~~L~p~t~Y~   79 (103)
T d1f6fb2           3 PEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEA---EEWEIHFTGHQTQFKVFDLYPGQKYL   79 (103)
T ss_dssp             CCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSC---SCCEEEEEETCSEEEECCCCTTCEEE
T ss_pred             CCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCC---cceeeecccceeEEEeCCCCcceEEE
Confidence            4788888875    3456789999999853    23467899999998774   45666666777899999999999999


Q ss_pred             EEEEEEeCCCC-CCCCCcEEEec
Q psy8771         554 IRVQAFTSVGP-GPLSAPVLVKT  575 (904)
Q Consensus       554 ~~V~a~~~~g~-~~~S~~~~~~t  575 (904)
                      |+|+|.+..|. |.||....+.+
T Consensus        80 ~rVra~~~~G~wS~wS~~~~~~~  102 (103)
T d1f6fb2          80 VQTRCKPDHGYWSRWSQESSVEM  102 (103)
T ss_dssp             EEEEEEESSSCCCCCCCCEEEEC
T ss_pred             EEEEEEeCCCCCCCCcCceeeEC
Confidence            99999999996 88998887765

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.3e-10  Score=94.35  Aligned_cols=85  Identities=16%  Similarity=0.239  Sum_probs=70.1

Q ss_pred             CCCCcEEEecC--CCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEe
Q psy8771         719 PPQNVSCEPLS--STSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAG  795 (904)
Q Consensus       719 ~P~~l~~~~~~--~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~  795 (904)
                      ||.+|.+..+.  .+.|.|+|++|.....++.+..|+|+|+..+...+  ....+. ..+.+.|.+|.|++.|.|+|+|.
T Consensus         4 pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~rVra~   81 (104)
T d1n26a3           4 PPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTF--TTWMVKDLQHHCVIHDAWSGLRHVVQLRAQ   81 (104)
T ss_dssp             CCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCC--EEEECGGGCSEEEESSCCTTCCEEEEEEEE
T ss_pred             CCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCce--eeeccccceEEEEECCCCCCCEEEEEEEEE
Confidence            68899987764  56899999998654567789999999998776544  334444 77899999999999999999999


Q ss_pred             eCCCCCCCCC
Q psy8771         796 TSIGDGPSSY  805 (904)
Q Consensus       796 ~~~g~g~~s~  805 (904)
                      |..|.|.+|+
T Consensus        82 n~~g~g~wSe   91 (104)
T d1n26a3          82 EEFGQGEWSE   91 (104)
T ss_dssp             ETTTBSCCCC
T ss_pred             eCCCccCCcC
Confidence            9999987765

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=3.3e-11  Score=105.50  Aligned_cols=110  Identities=21%  Similarity=0.202  Sum_probs=81.0

Q ss_pred             cCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCC-CceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceee
Q psy8771         575 TQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIIS  653 (904)
Q Consensus       575 t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~-~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~  653 (904)
                      +....|..+....+.+++.+++.|+|.+|...++ .+..|.                                 ...+..
T Consensus        13 ~~~~~~~~~~~P~V~~v~~~sv~l~W~~P~~~~~~~~~~~~---------------------------------~~~~~~   59 (137)
T d1wk0a_          13 AFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESS---------------------------------VPELYG   59 (137)
T ss_dssp             HHHHHTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSC---------------------------------SCSCCE
T ss_pred             EeccCCCCCCCCEEEEeEcCEEEEEEeCcCcCCCceeeccc---------------------------------cceEEe
Confidence            3333455566667888888899999988764322 122221                                 124677


Q ss_pred             EEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771         654 YELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG  717 (904)
Q Consensus       654 y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~  717 (904)
                      |.+.+........ .....+....++|.+|+|++.|.|+|+|+|..|.|.+|..+.++|...+|.
T Consensus        60 y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~~P~  124 (137)
T d1wk0a_          60 YEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPD  124 (137)
T ss_dssp             EEEEECSSCTTSCCEEEEEESCSEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSSSC
T ss_pred             eEEEEeeCCCCccEEEEEecCccEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCCCCC
Confidence            8888876654433 344555678999999999999999999999999999999999999988775

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.12  E-value=1.4e-10  Score=93.25  Aligned_cols=87  Identities=16%  Similarity=0.332  Sum_probs=72.3

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT  796 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~  796 (904)
                      .+|.++.+..++.+++.|+|++|.     +.+.+|.|+|+..++..+.. ...+. ..+.++|.+|.|++.|.|+|+|.+
T Consensus         5 ~~P~~l~v~~v~~~si~v~W~~p~-----~~~~~y~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~   78 (93)
T d1tdqa1           5 DGPTQILVRDVSDTVAFVEWTPPR-----AKVDFILLKYGLVGGEGGKT-TFRLQPPLSQYSVQALRPGSRYEVSISAVR   78 (93)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEESSSSCCCE-EEEECTTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred             CcCCCCEEEEeCCCEEEEEEEccc-----cCCCceEEEEEeccCcceee-EEEeCCCceEEEEeCcccceEEEEEEEEEe
Confidence            368999999999999999999873     56889999999987655433 34455 888999999999999999999999


Q ss_pred             CCCCCCCCCcEEeec
Q psy8771         797 SIGDGPSSYPITIRT  811 (904)
Q Consensus       797 ~~g~g~~s~~~~~~t  811 (904)
                      ..|.|..+. ..++|
T Consensus        79 ~~g~s~~~~-~~~tT   92 (93)
T d1tdqa1          79 GTNESDASS-TQFTT   92 (93)
T ss_dssp             TTEECCCEE-EEEEC
T ss_pred             CCCCcCCEE-EEEEC
Confidence            999887653 56665

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.5e-10  Score=92.00  Aligned_cols=75  Identities=21%  Similarity=0.410  Sum_probs=55.5

Q ss_pred             ceEEEeccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEec
Q psy8771         635 TAVTLAWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK  712 (904)
Q Consensus       635 ~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~  712 (904)
                      +++.|+|.++  .++.+.+|+|+|+..++...  .....+....++|.||+|++.|.|+|.|+|..|.|..+ ...|+|.
T Consensus        16 ~s~~vsW~~P--~~~~i~~Y~i~y~~~~~~~~~~~~~v~~~~~~~~l~gL~P~t~Y~v~v~av~~~G~s~~~-~~~~tT~   92 (93)
T d1owwa_          16 NSHPIQWNAP--QPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVT-RFDFTTT   92 (93)
T ss_dssp             TCEEEEEECC--SSSCEEEEEEEEEETTCSSCCEEEEECSSCCEEEECSCCSSEEEEEEEEEEESSSCEEEE-EEEEEEC
T ss_pred             CEEEEEeecc--cccceeEEEEEEeeccccceeeeeccCCCccEEEECCcccCcEEEEEEEEEeCCCccCcE-EEEEEec
Confidence            3444444443  24579999999998765543  23344567799999999999999999999999998776 4666663

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=2.2e-10  Score=96.06  Aligned_cols=90  Identities=29%  Similarity=0.464  Sum_probs=72.4

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEe
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFT  560 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~  560 (904)
                      .|.+|.++++.. ..+++.|+|++|...+|.+.+|.|+|+..+.   ..+......+.+.+.+.+|.+++.|.|+|+|.|
T Consensus        20 vP~~P~~~~~~~-~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~---~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   95 (113)
T d1x5ia1          20 VPEVPSSLHVRP-LVTSIVVSWTPPENQNIVVRGYAIGYGIGSP---HAQTIKVDYKQRYYTIENLDPSSHYVITLKAFN   95 (113)
T ss_dssp             CCCSCSEEEEEE-ETTEEEEEEECCSCTTBCCCEEEEEECSSCG---GGEEEECCTTCCEEEECSCCSSCEECCEEEEEC
T ss_pred             CCCCCEeeeeee-CCCEEEEEEEccccCCccEEEEEEEeeeccc---cceeeeeeCCccEEEEeccccCcEEEEEEEEEC
Confidence            457899999865 4579999999998888899999999987652   334444457778899999999999999999999


Q ss_pred             CCCCCCCCCcEEEec
Q psy8771         561 SVGPGPLSAPVLVKT  575 (904)
Q Consensus       561 ~~g~~~~S~~~~~~t  575 (904)
                      ..|.|+.+. ..+.|
T Consensus        96 ~~G~g~~~~-~~~~T  109 (113)
T d1x5ia1          96 NVGEGIPLY-ESAVT  109 (113)
T ss_dssp             SSCBCCCCC-CCEEC
T ss_pred             CCcCCCCee-eEEEe
Confidence            999987543 33444

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.3e-10  Score=92.79  Aligned_cols=82  Identities=23%  Similarity=0.288  Sum_probs=70.3

Q ss_pred             CCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE-eecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE-ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       201 P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      +++|.+|++..++.+++.|+|+++.+++.+|.|.|...+....... ........++|.+|.|++.|.|+|.|.|+.|.+
T Consensus         2 ld~P~~l~v~~~s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s   81 (90)
T d1tena_           2 LDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGDMSS   81 (90)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred             CCCCCCcEEEEecCCEEEEEEEeCceEeccEEEEEEEcCCCceeEEEEecCCcceeeEeeecCCCEEEEEEEEEeCCCEe
Confidence            5789999999999999999999998899999999998765444433 345566899999999999999999999999987


Q ss_pred             CCC
Q psy8771         280 PPS  282 (904)
Q Consensus       280 ~~s  282 (904)
                      .+.
T Consensus        82 ~~~   84 (90)
T d1tena_          82 NPA   84 (90)
T ss_dssp             CCE
T ss_pred             CCE
Confidence            654

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.11  E-value=1.5e-10  Score=91.81  Aligned_cols=80  Identities=19%  Similarity=0.281  Sum_probs=68.4

Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE-EecccceEEEeCCCCCcEEEEEEEEEcCCCC
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR-RIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  700 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~  700 (904)
                      ++|.+|++.++++++++|+|.++   .+.+.+|.|.|+..+....... .....+++.|.||.|++.|.|+|.|+|..|.
T Consensus         2 ~~P~~l~v~~v~~~s~~l~W~~~---~~~~~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~   78 (88)
T d1qr4a2           2 GSPKGISFSDITENSATVSWTPP---RSRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEE   78 (88)
T ss_dssp             CCCSCEEEESCCSSCEEEEECCC---SSCCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEE
T ss_pred             cCCcceEEEEecCCEEEEEEEcc---cEeeceEEEEEEeccCCceEEEEecCCccEEEECCCCCCCEEEEEEEEEeCCCC
Confidence            57999999999999999999985   4579999999999877665333 3455679999999999999999999999998


Q ss_pred             CCCC
Q psy8771         701 GATT  704 (904)
Q Consensus       701 ~~~s  704 (904)
                      |.+.
T Consensus        79 s~p~   82 (88)
T d1qr4a2          79 SEPI   82 (88)
T ss_dssp             CCCE
T ss_pred             cCCE
Confidence            7653

>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.3e-10  Score=96.49  Aligned_cols=84  Identities=23%  Similarity=0.356  Sum_probs=65.5

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee------e----------cceEEEEeee--c
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP------V----------GRNVLTLDRV--T  166 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~------~----------~~~~l~i~~l--~  166 (904)
                      |.|..++.+.+.+..|+++.|.|.+.|.|.|.|.|+++ +..+.......      .          ....|.|.++  +
T Consensus         2 P~i~~p~~~~i~v~~G~~v~l~C~v~g~P~p~i~W~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~   80 (107)
T d1iray3           2 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN-GSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESR   80 (107)
T ss_dssp             CEEEECCSEEEECCTTCCEEEEEEEEECTTCEEEEEET-TEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGG
T ss_pred             CCEEEECCCEEEEeCCCEEEEEEEeccCCCCeEEEEEC-CcccccccceeeeeeeeeccceeeecccceEEEEEeecchH
Confidence            67777666557788999999999999999999999999 66554332211      0          1247999999  5


Q ss_pred             CCe-EEEEEEEecCcceEEEEEEE
Q psy8771         167 ESE-NYTCIAASVLGVIETSTIVK  189 (904)
Q Consensus       167 d~g-~Y~c~a~n~~g~~~~~~~l~  189 (904)
                      |.| .|+|.|.|..|..++.+.|.
T Consensus        81 D~g~~Y~C~A~N~~G~~~~~i~L~  104 (107)
T d1iray3          81 FYKHPFTCFAKNTHGIDAAYIQLI  104 (107)
T ss_dssp             GGSSCEEEEEECSSCEEEEEEEEE
T ss_pred             HCCcEEEEEEEeCCCeEEEEEEEE
Confidence            888 59999999999988877664

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=4.2e-10  Score=92.97  Aligned_cols=65  Identities=17%  Similarity=0.225  Sum_probs=54.1

Q ss_pred             CCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCC-CCCCCCeeEEec
Q psy8771         648 GENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE-GATTPPIPVRTK  712 (904)
Q Consensus       648 ~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~-~~~s~~~~~~t~  712 (904)
                      ...+..|.++|+..+...+..........+.|.+|++++.|.|+|+|.|..|. |++|..+.+.|+
T Consensus        38 ~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP  103 (104)
T d3d48r2          38 GWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP  103 (104)
T ss_dssp             SSCCEEEEEEEEETTCSSCEEEEEETCSEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred             CcEEEEEeeccccccccceeeeccccccEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence            34577899999998877776666777789999999999999999999999998 999999888764

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.7e-10  Score=92.28  Aligned_cols=87  Identities=16%  Similarity=0.188  Sum_probs=72.1

Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc--eEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH--HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      ++|.+|.+.+++.+++.|+|.++   .+.+.+|.|+|.........  .......++++|.+|.|++.|.|+|+|+|..|
T Consensus         1 PpP~~l~~~~v~~~si~l~W~~p---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~g   77 (90)
T d1fnha1           1 PAPTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTL   77 (90)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---SSCCSEEEEEEEESSSCSCCCEEEECTTCCEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CCCCCEEEEEecCCEEEEEEEcc---ceeccceEEEEEeeeCCCceEEEEeCCCCeEEEEecccCceEEEEEEEEEeCCC
Confidence            57999999999999999999985   45788999999888765542  33445667999999999999999999999999


Q ss_pred             CCCCCCCeeEEec
Q psy8771         700 EGATTPPIPVRTK  712 (904)
Q Consensus       700 ~~~~s~~~~~~t~  712 (904)
                      .|.++ ...+.|.
T Consensus        78 ~s~~~-~~~~~T~   89 (90)
T d1fnha1          78 TSRPA-QGVVTTL   89 (90)
T ss_dssp             ECCCE-EEEEECC
T ss_pred             CcCCE-eEEEEcC
Confidence            98876 4556664

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.8e-10  Score=91.95  Aligned_cols=80  Identities=24%  Similarity=0.497  Sum_probs=70.7

Q ss_pred             CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCC
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPP  281 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~  281 (904)
                      .||.+|++...+.+++.|+|.++.+++.+|.|.|...++..............+.|.+|+|++.|.|+|+|.|..|.+.+
T Consensus         3 spP~~l~v~~~~~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p   82 (90)
T d1fnha2           3 SPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSP   82 (90)
T ss_dssp             CCCEEEEEEEECSSEEEEEEECCSSCCCCEEEEEEESSSSCCEEEECCTTCSEEEEESCCTTCEEEEEEEEEETTEECCC
T ss_pred             CcCCCCEEEEecCCEEEEEEECCCCCCceeEEEEEEccCCceEEEecCCCccEEEeCCCCCCcEEEEEEEEEeCCCCcCC
Confidence            58999999999999999999999888999999999876655555556666789999999999999999999999998764

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=3.1e-10  Score=90.74  Aligned_cols=79  Identities=29%  Similarity=0.496  Sum_probs=66.2

Q ss_pred             CCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCC
Q psy8771         721 QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIG  799 (904)
Q Consensus       721 ~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g  799 (904)
                      .+|++..++.+++.|+|++|.     +.+.+|.|+|...++.... ....++ +.+.+.|.+|.|++.|.|+|.|.+..|
T Consensus         1 rnl~v~~~t~~sv~l~W~~p~-----~~~~~Y~v~~~~~~~~~~~-~~~~~~~~~t~~~l~~L~p~t~Y~~~V~a~~~~g   74 (91)
T d1fnaa_           1 RDLEVVAATPTSLLISWDAPA-----VTVRYYRITYGETGGNSPV-QEFTVPGSKSTATISGLKPGVDYTITVYAVTGRG   74 (91)
T ss_dssp             CCCEEEEECSSCEEEECCCCS-----SCCSEEEEEEEETTCCSCC-EEEEEETTCCEEEECSCCTTCEEEEEEEEECTTC
T ss_pred             CCCEEEEeCCCEEEEEEEccc-----eEecEEEEEEEcCCCCcee-EEEEeCCCccEEEeCCCCCCCEEEEEEEEEeCCc
Confidence            478999999999999999883     4588999999987755443 344455 889999999999999999999999999


Q ss_pred             CCCCCC
Q psy8771         800 DGPSSY  805 (904)
Q Consensus       800 ~g~~s~  805 (904)
                      .|+.+.
T Consensus        75 ~s~~~s   80 (91)
T d1fnaa_          75 DSPASS   80 (91)
T ss_dssp             CSSCSC
T ss_pred             cCCCcC
Confidence            987653

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.7e-10  Score=92.12  Aligned_cols=87  Identities=26%  Similarity=0.417  Sum_probs=71.1

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEE-ecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRR-IGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .+||.+|++..++.+++.|+|.++   .+.+.+|+|+|...++....... ......+.|.+|+||+.|.|+|+|++..|
T Consensus         2 ~spP~~l~v~~~~~~si~v~W~~p---~~~~~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g   78 (90)
T d1fnha2           2 VSPPRRARVTDATETTITISWRTK---TETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNA   78 (90)
T ss_dssp             CCCCEEEEEEEECSSEEEEEEECC---SSCCCCEEEEEEESSSSCCEEEECCTTCSEEEEESCCTTCEEEEEEEEEETTE
T ss_pred             cCcCCCCEEEEecCCEEEEEEECC---CCCCceeEEEEEEccCCceEEEecCCCccEEEeCCCCCCcEEEEEEEEEeCCC
Confidence            478999999999999999999985   35789999999988766554333 44567999999999999999999999998


Q ss_pred             CCCCCCCeeEEe
Q psy8771         700 EGATTPPIPVRT  711 (904)
Q Consensus       700 ~~~~s~~~~~~t  711 (904)
                      .|.+. .+.++|
T Consensus        79 ~s~p~-~~~~~T   89 (90)
T d1fnha2          79 RSSPV-VIDAST   89 (90)
T ss_dssp             ECCCE-EEEEEC
T ss_pred             CcCCE-EEEEEC
Confidence            87643 344443

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.10  E-value=2.3e-10  Score=92.06  Aligned_cols=89  Identities=21%  Similarity=0.367  Sum_probs=69.0

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE-eecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ-VVDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      .+|.+|.+..++.+++.|+|++|.   +.+.+|.|+|+...+.....+... ...+.+++.|.+|.|++.|.|+|+|++.
T Consensus         2 daP~~l~v~~~~~~sv~v~W~~p~---~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   78 (92)
T d1tdqa2           2 DAPKNLRVGSRTATSLDLEWDNSE---AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMN   78 (92)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEET
T ss_pred             ccCcCCEEEEecCCEEEEEEEecC---CcccceEEEEEEcCCCcceeeEEEecCCCeeEEEECCccCCCEEEEEEEEEeC
Confidence            478899999999999999999974   568899999998765433322222 2256678999999999999999999999


Q ss_pred             CCCCCCCCcEEEec
Q psy8771         562 VGPGPLSAPVLVKT  575 (904)
Q Consensus       562 ~g~~~~S~~~~~~t  575 (904)
                      .|.|.++ ...++|
T Consensus        79 ~g~s~p~-~~~~~T   91 (92)
T d1tdqa2          79 SKQSIPA-TMNART   91 (92)
T ss_dssp             TEECCCE-EEEEEC
T ss_pred             CCEecCE-EEEEEC
Confidence            9987654 244443

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.6e-10  Score=92.10  Aligned_cols=79  Identities=23%  Similarity=0.347  Sum_probs=66.8

Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc--eEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH--HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .+|.+|++.+++.+++.|+|.++.   +.+.+|+|.|+..+...+.  .......+++.|.+|.|++.|.|+|+|++..|
T Consensus         2 d~P~~l~v~~vt~~sv~l~W~~p~---~~~~~Y~i~~~~~~~~~~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g   78 (89)
T d1fnfa3           2 DSPTGIDFSDITANSFTVHWIAPR---ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGRE   78 (89)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTE
T ss_pred             ccCcCCEEEEecCCEEEEEEEeCC---CEEeeEEEEEEECCCCCceEEEEECCCccEEEECCCcccCEEEEEEEEEcCCc
Confidence            589999999999999999999863   5689999999987765542  33345677999999999999999999999988


Q ss_pred             CCCC
Q psy8771         700 EGAT  703 (904)
Q Consensus       700 ~~~~  703 (904)
                      .|.+
T Consensus        79 ~s~p   82 (89)
T d1fnfa3          79 ESPL   82 (89)
T ss_dssp             ECCC
T ss_pred             CcCC
Confidence            7654

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=2.4e-10  Score=94.37  Aligned_cols=90  Identities=16%  Similarity=0.111  Sum_probs=64.3

Q ss_pred             CCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCC
Q psy8771         720 PQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSI  798 (904)
Q Consensus       720 P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~  798 (904)
                      |..+.+.....++|.|+|++|.  ..++.+.+|.|+|+...+........... ..+.++|.+|.+++.|.|+|+|.+..
T Consensus        11 P~~p~~~~~~~~~i~v~W~pp~--~~~~~~~~Y~i~y~~~~~~~~w~~v~~~~~~~~~~~l~~L~p~t~Y~frVra~~~~   88 (106)
T d1cd9b2          11 DIGPDVVSHQPGCLWLSWKPWK--PSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSS   88 (106)
T ss_dssp             CC-------CCSCEEEEEECCG--GGTTSCEEEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESS
T ss_pred             CCCCeEecCCCCEEEEEEcCcc--cCCccceEEEEEEeeccccccceeeecccCCceEEEEeccCCCeEEEEEEEEEeCC
Confidence            4556777788999999999984  56778999999999865433222323333 78899999999999999999999999


Q ss_pred             CCCCCC---CcEEeec
Q psy8771         799 GDGPSS---YPITIRT  811 (904)
Q Consensus       799 g~g~~s---~~~~~~t  811 (904)
                      |.|.+|   ..+.+++
T Consensus        89 g~g~wS~wS~~~~~~~  104 (106)
T d1cd9b2          89 LPGFWSPWSPGLQLRP  104 (106)
T ss_dssp             SCCCCCCCCCCEEECC
T ss_pred             CCCCCcCCCCCeEecC
Confidence            987655   4555554

>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Junction adhesion molecule, JAM, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=1.5e-10  Score=95.02  Aligned_cols=86  Identities=17%  Similarity=0.317  Sum_probs=66.8

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-----------CCCceeecceEEEEeee--cCCeEE
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-----------PDDKLPVGRNVLTLDRV--TESENY  171 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-----------~~~~~~~~~~~l~i~~l--~d~g~Y  171 (904)
                      |.+...+.+ +.+.+|+++.|.|.+.|.|.|.|.|+|+++....           ...+....+++|.|.++  +|+|.|
T Consensus         2 ~sV~t~~~~-v~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tL~I~~v~~~D~G~Y   80 (102)
T d1f97a1           2 GSVYTAQSD-VQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEY   80 (102)
T ss_dssp             CEEECSCSE-EEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEE
T ss_pred             CCEEccCCc-EEEeCCCEEEEEEEcCCCCCCeEEEEeccccceeeeccccccccceeeEEEecCCEEEEeECCccCCEEE
Confidence            455566666 9999999999999999999999999996332111           11233345668999999  799999


Q ss_pred             EEEEEecCcceEEEEEEEEE
Q psy8771         172 TCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       172 ~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +|.|.|..|.....+.+.+.
T Consensus        81 ~C~a~n~~g~~~~~~~v~v~  100 (102)
T d1f97a1          81 TCMVSEEGGQNYGEVSIHLT  100 (102)
T ss_dssp             EEEEEETTSSSEEEEEEEEE
T ss_pred             EEEEEECCCCEEEEEEEEEE
Confidence            99999999998777766654

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=2.5e-10  Score=94.25  Aligned_cols=86  Identities=13%  Similarity=0.178  Sum_probs=64.6

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      .|..+.+...+.++|.|+|++|...++.+.+|.|+|+...+.  ..|.....  ...+.+.|.+|.|++.|.|+|+|++.
T Consensus        10 ~P~~p~~~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~--~~w~~v~~~~~~~~~~~l~~L~p~t~Y~frVra~~~   87 (106)
T d1cd9b2          10 LDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKG--ANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRS   87 (106)
T ss_dssp             CCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTT--CCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEES
T ss_pred             CCCCCeEecCCCCEEEEEEcCcccCCccceEEEEEEeecccc--ccceeeecccCCceEEEEeccCCCeEEEEEEEEEeC
Confidence            345567778889999999999887778899999999976543  44555433  56788999999999999999999999


Q ss_pred             CCCCCCCCcE
Q psy8771         562 VGPGPLSAPV  571 (904)
Q Consensus       562 ~g~~~~S~~~  571 (904)
                      .|.|.+|+..
T Consensus        88 ~g~g~wS~wS   97 (106)
T d1cd9b2          88 SLPGFWSPWS   97 (106)
T ss_dssp             SSCCCCCCCC
T ss_pred             CCCCCCcCCC
Confidence            9998776543

>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: B- and T-lymphocyte attenuator CD272
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=8.6e-11  Score=96.81  Aligned_cols=84  Identities=21%  Similarity=0.343  Sum_probs=62.5

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccCC--CCceee------cceEEEEeee--cCCeEEEEEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELTP--DDKLPV------GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~~--~~~~~~------~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      |+..+.+ .++..|+++.|.|.+.|.| .|.|+|+|+++.....  ..+...      ....|.|.++  +|+|.|+|.|
T Consensus         6 fi~~~~~-~~v~~G~~v~L~C~v~g~p~~P~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A   84 (104)
T d2aw2a1           6 YIKRQSE-HSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSA   84 (104)
T ss_dssp             CCCTTEE-EEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSCEEEEECSSCEEEEEEESSCCGGGCEEEEEEE
T ss_pred             EEecCCe-EEEeCCCeEEEEEEEEeeCCCCEEEEEecCcccccccceeeeeEEecCCceEEEEEEccccHHHCCeEEEEE
Confidence            4455556 8999999999999999999 5899999983332221  122211      1235999998  6999999999


Q ss_pred             EecCcceE-EEEEEEEE
Q psy8771         176 ASVLGVIE-TSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~-~~~~l~v~  191 (904)
                      .|..|... .++.|.|.
T Consensus        85 ~N~~G~~~s~~~~l~V~  101 (104)
T d2aw2a1          85 NFQSNLIESHSTTLYVT  101 (104)
T ss_dssp             EETTEEEECCCEEEEEE
T ss_pred             EcCCCeEEEEEEEEEEE
Confidence            99999865 47777776

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.2e-10  Score=91.78  Aligned_cols=79  Identities=18%  Similarity=0.310  Sum_probs=55.2

Q ss_pred             CCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc--eEEecccceEEEeCCCCCcEEEEEEEEEcCCCC
Q psy8771         623 KPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH--HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE  700 (904)
Q Consensus       623 ~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~  700 (904)
                      +|.+|++.+++.+++.|+|.++  .++.+.+|.|+|+..++....  .......+.+.|.+|+|++.|.|+|+|++..|.
T Consensus         3 pP~~l~~~~~~~~sv~l~W~~p--~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~   80 (91)
T d1fnfa2           3 PPTDLRFTNIGPDTMRVTWAPP--PSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHE   80 (91)
T ss_dssp             CCEEEEEESCCSSCEEEEEECC--TTCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred             cCCceEEEEeCCCEEEEEEEec--CCCCcceeEEEEEECCCCccEEEEEeCCCceEEEEeceeCCCEEEEEEEEEcCCCC
Confidence            3444444444444444444443  345688999999987765542  233446679999999999999999999999887


Q ss_pred             CCC
Q psy8771         701 GAT  703 (904)
Q Consensus       701 ~~~  703 (904)
                      |.+
T Consensus        81 S~p   83 (91)
T d1fnfa2          81 STP   83 (91)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            654

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=4.2e-11  Score=101.23  Aligned_cols=100  Identities=23%  Similarity=0.340  Sum_probs=75.6

Q ss_pred             CCCCCCeEEEe--cCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEE-EeecCceEEEEcCCCCCCeEEEEEEE
Q psy8771         482 GTAPRDVQVRP--LSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWET-QVVDNNQLTTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       482 ~~~p~~l~v~~--~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~p~t~Y~~~V~a  558 (904)
                      |.+|.++.+..  .+.++|.|+|++|.+.++.+.+|.|+|+...+.....+.. ......+.+.|.+|.+++.|.|+|+|
T Consensus         5 P~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~a   84 (115)
T d1bqua2           5 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRC   84 (115)
T ss_dssp             CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEE
T ss_pred             CCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccccccccccccEEeeCCCccCcEEEEEEEE
Confidence            36788888764  5678899999998877888999999999876433221111 11255678999999999999999999


Q ss_pred             EeCCCCCCC---CCcEEEecCCCCCC
Q psy8771         559 FTSVGPGPL---SAPVLVKTQQGVPS  581 (904)
Q Consensus       559 ~~~~g~~~~---S~~~~~~t~~~~p~  581 (904)
                      .|..|.|.+   |....++|....|.
T Consensus        85 ~~~~G~g~~S~~S~~~~~~T~~~~P~  110 (115)
T d1bqua2          85 MKEDGKGYWSDWSEEASGITYEDRPS  110 (115)
T ss_dssp             EETTSCSCCCCCCCCEEEEECCCHHH
T ss_pred             EeCCCccCCcCCcCCEEEECCCCCCC
Confidence            999998755   45677888766654

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=8e-10  Score=91.24  Aligned_cols=94  Identities=18%  Similarity=0.266  Sum_probs=72.3

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCC--CceeeEEEEEEeCCCCCCcceE-EEeecCceEEEEcCCCCCCeEEEEEEE
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPN--GQITGYKVYYTQDQSLPMSAWE-TQVVDNNQLTTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~--~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~p~t~Y~~~V~a  558 (904)
                      +.||.+|++..++.+++.|+|.+|...+  .....|.+++....... ..+. .........+.|.+|+|++.|.|+|+|
T Consensus         3 l~pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra   81 (104)
T d2b5ib2           3 LMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTW-EEAPLLTLKQKQEWICLETLTPDTQYEFQVRV   81 (104)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCS-TTSCCEEECSCCCEEEECSCCTTCEEEEEEEE
T ss_pred             cCCCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccc-eeeeEEecCCCcEEEEECCCCCCCEEEEEEEE
Confidence            3689999999999999999999976543  35678999998776432 2222 223356778999999999999999999


Q ss_pred             EeCCCC----CCCCCcEEEecC
Q psy8771         559 FTSVGP----GPLSAPVLVKTQ  576 (904)
Q Consensus       559 ~~~~g~----~~~S~~~~~~t~  576 (904)
                      .+..|.    +.+|..+.+.|.
T Consensus        82 ~~~~g~~g~wS~wS~~v~~~T~  103 (104)
T d2b5ib2          82 KPLQGEFTTWSPWSQPLAFRTK  103 (104)
T ss_dssp             EESCCSSCCCCCCCCCEEEECC
T ss_pred             EECCCCCCCCCCCcCCEEEECC
Confidence            998874    456777788774

>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Junction adhesion molecule, JAM, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=9.7e-11  Score=97.02  Aligned_cols=85  Identities=22%  Similarity=0.377  Sum_probs=65.7

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC------------CCCceeecceEEEEeee--cCCeE
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT------------PDDKLPVGRNVLTLDRV--TESEN  170 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~------------~~~~~~~~~~~l~i~~l--~d~g~  170 (904)
                      +.+...+.. +.+.+|+++.|.|.+.|.|.|.|.|+|+ +..+.            ...+....+++|.|.++  +|+|.
T Consensus         5 v~V~~~~~~-v~v~~g~~v~L~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~   82 (105)
T d1nbqa1           5 VTVHSSEPE-VRIPENNPVKLSCAYSGFSSPRVEWKFD-QGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGT   82 (105)
T ss_dssp             CEEECSCSB-CCEETTCCCEEECEEESCSSEEEEEEEE-ETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSE
T ss_pred             eEEECCCCe-EEEeCCCeEEEEEEeCCCCCCeeEEEee-eeceeeeeeccceeeccccceeeecCceEEEecccccceee
Confidence            445555555 8899999999999999999999999997 33221            12233344578999999  69999


Q ss_pred             EEEEEEecCcceEEEEEEEEE
Q psy8771         171 YTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       171 Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      |+|.|.|..|.....+.|.+.
T Consensus        83 Y~C~a~n~~G~~~~~~~v~v~  103 (105)
T d1nbqa1          83 YTCMVSEEGGNSYGEVKVKLI  103 (105)
T ss_dssp             EEEEEEETTSSCEECCEEECC
T ss_pred             EEEEEEECCCCEEEEEEEEEE
Confidence            999999999998777666653

>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=99.71  Aligned_cols=86  Identities=23%  Similarity=0.370  Sum_probs=65.4

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCCCCcee-----------ecceEEEEeee--cCCe
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTPDDKLP-----------VGRNVLTLDRV--TESE  169 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~-----------~~~~~l~i~~l--~d~g  169 (904)
                      ||.+...... ..+.+|+.++|.|.+ .|.|.|.|.|+|+ +..+....+..           ...+.|.|.++  +|+|
T Consensus         2 PP~~p~~~~~-~~v~~G~~v~l~C~~~~g~p~p~v~W~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G   79 (104)
T d1nbqa2           2 PPSKPTVNIP-SSATIGNRAVLTCSEQDGSPPSEYTWFKD-GIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTG   79 (104)
T ss_dssp             CCCCCCCCCB-SEEETTSCEEECCCCCSCBSCCEEEEEET-TCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCC
T ss_pred             CCcccccCCC-CEEecCCcEEEEEEeecCCCCCEEEEEEC-CEEccCCCceeEEeeCCcEEEeecccceEECCCCcccCc
Confidence            5655555555 778899999999998 4899999999999 55554432221           13457999998  6999


Q ss_pred             EEEEEEEecCcceEEEEEEEEE
Q psy8771         170 NYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       170 ~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      .|+|.|.|..|....++.+.+.
T Consensus        80 ~Y~C~a~N~~G~~~~s~~v~v~  101 (104)
T d1nbqa2          80 EYSCEARNGYGTPMTSNAVRME  101 (104)
T ss_dssp             CEEEEEECSSSCCEECCCBCCE
T ss_pred             EEEEEEEECCCceEEEEEEEEE
Confidence            9999999999998776655544

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=1.3e-10  Score=92.72  Aligned_cols=79  Identities=22%  Similarity=0.382  Sum_probs=65.7

Q ss_pred             CCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc--eEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH--HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      .+|.+|++..++.+++.|+|.++   .+.+.+|.|+|+..++....  .......+.+.|.+|.|++.|.|+|+|+|..|
T Consensus         2 daP~nl~v~~~~~~s~~l~W~~p---~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~n~~g   78 (89)
T d1fnha3           2 DAPSNLRFLATTPNSLLVSWQPP---RARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQ   78 (89)
T ss_dssp             CCCEEEEEEEEETTEEEEEEECC---SSCCSEEEEEEECTTSCCEECTTCCCTTCCEEEEESCCTTCEEEEEEEEESSSC
T ss_pred             ccCcCCEEEEecCCEEEEEEeCC---CcCCceEEEEEeeccCCccEEEEEcCCCccEEEEEeeeCCCEEEEEEEEEcCCC
Confidence            57999999999999999999985   35799999999987665542  22334567899999999999999999999988


Q ss_pred             CCCC
Q psy8771         700 EGAT  703 (904)
Q Consensus       700 ~~~~  703 (904)
                      .|.+
T Consensus        79 ~S~p   82 (89)
T d1fnha3          79 KSEP   82 (89)
T ss_dssp             EEEE
T ss_pred             EeCC
Confidence            7643

>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=2.4e-10  Score=92.38  Aligned_cols=83  Identities=14%  Similarity=0.326  Sum_probs=66.9

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEEecC
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      +|.|.  +.+ .++.+|++++|.|.+.| |.+.|.|+++ +..+....+..+  +.+.|.|.++  +|.|.|+|.|.|..
T Consensus         5 ~P~i~--~~~-~~v~~g~~v~l~C~~~~-~~~~v~W~~~-~~~l~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~   79 (96)
T d1l6za2           5 QPFLQ--VTN-TTVKELDSVTLTCLSND-IGANIQWLFN-SQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPV   79 (96)
T ss_dssp             CCCEE--CSC-SEECTTSCEEEEECCCC-SSCEEEEEET-TEECCCCTTEEEETTTTEEEECSCCGGGCEEEEEEEESSS
T ss_pred             CCeEE--cCc-eEEeCCCeEEEEEccCC-CCCCEEEEEe-eeecccccceeccCCceEEEEeccchhhceEEEEEEEeCC
Confidence            45554  345 78899999999999877 5578999999 777777666654  5678999999  69999999999999


Q ss_pred             cceE-EEEEEEEE
Q psy8771         180 GVIE-TSTIVKVQ  191 (904)
Q Consensus       180 g~~~-~~~~l~v~  191 (904)
                      |... ..+.|.|.
T Consensus        80 g~~~S~~~~L~V~   92 (96)
T d1l6za2          80 SVRRSNSIKLDII   92 (96)
T ss_dssp             CCEECCCCEEEEC
T ss_pred             CCeEEEeEEEEEE
Confidence            9864 46778876

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=6.9e-11  Score=99.88  Aligned_cols=100  Identities=17%  Similarity=0.300  Sum_probs=78.8

Q ss_pred             CCCCcceEEE--eeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE----EecccceEEEeCCCCCcEEEEEEEE
Q psy8771         621 YAKPRDLRAV--DIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR----RIGLVETYSLTGLYPNTLYYIWLAA  694 (904)
Q Consensus       621 ~~~p~~l~~~--~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~----~~~~~~~~~l~~L~p~t~Y~v~V~a  694 (904)
                      |.+|.++.+.  ..+.+++.|+|.++...++.+.+|.|+|+...+..+...    .....+.+.|.+|.+++.|.|+|+|
T Consensus         5 P~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~a   84 (115)
T d1bqua2           5 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRC   84 (115)
T ss_dssp             CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEE
T ss_pred             CCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccccccccccccEEeeCCCccCcEEEEEEEE
Confidence            5788888775  466889999999988778899999999998876665222    2234578999999999999999999


Q ss_pred             EcCCCCCCC---CCCeeEEecCCCCCCCC
Q psy8771         695 QSPRGEGAT---TPPIPVRTKQYVPGAPP  720 (904)
Q Consensus       695 ~~~~G~~~~---s~~~~~~t~~~~p~~~P  720 (904)
                      +|..|.|.+   |..+.++|.+.+|..+|
T Consensus        85 ~~~~G~g~~S~~S~~~~~~T~~~~P~~~P  113 (115)
T d1bqua2          85 MKEDGKGYWSDWSEEASGITYEDRPSKEP  113 (115)
T ss_dssp             EETTSCSCCCCCCCCEEEEECCCHHHHHH
T ss_pred             EeCCCccCCcCCcCCEEEECCCCCCCCCc
Confidence            999998755   45678888887766544

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1e-09  Score=90.57  Aligned_cols=92  Identities=16%  Similarity=0.302  Sum_probs=69.8

Q ss_pred             CCCCCCeEEE----ecCCceEEEEecCCCCC----CCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEE
Q psy8771         482 GTAPRDVQVR----PLSSSTMVIQWDEPETP----NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT  553 (904)
Q Consensus       482 ~~~p~~l~v~----~~~~~~~~l~W~~p~~~----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~  553 (904)
                      |.+|.++.+.    ..+.++|.|+|++|...    ++.+..|.+++....+   ..|........+.+.+.+|.+++.|.
T Consensus         3 P~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~---~~~~~~~~~~~~~~~i~~L~p~t~Y~   79 (104)
T d3d48r2           3 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKA---AEWEIHFAGQQTEFKILSLHPGQKYL   79 (104)
T ss_dssp             CCCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTC---SSCEEEEEETCSEEEECC--CCCEEE
T ss_pred             CcCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccc---cceeeeccccccEEEECCCCCCCEEE
Confidence            4788888875    44567899999997542    2356789999988764   34555666777889999999999999


Q ss_pred             EEEEEEeCCCC-CCCCCcEEEecC
Q psy8771         554 IRVQAFTSVGP-GPLSAPVLVKTQ  576 (904)
Q Consensus       554 ~~V~a~~~~g~-~~~S~~~~~~t~  576 (904)
                      |+|+|.|..|. |++|..+.+.++
T Consensus        80 ~rVrA~n~~G~ws~wS~~~~v~tP  103 (104)
T d3d48r2          80 VQVRCKPDHGYWSAWSPATFIQIP  103 (104)
T ss_dssp             EEEEEEESSSCCCCCCCCEEEECC
T ss_pred             EEEEEEeCCCCCCCCcCCEEEECc
Confidence            99999999997 899999988764

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.05  E-value=3.2e-10  Score=89.47  Aligned_cols=80  Identities=26%  Similarity=0.326  Sum_probs=68.1

Q ss_pred             CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCC
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPP  281 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~  281 (904)
                      ++|.++++...+.+++.|+|+++.+.+.+|.|.|+..++.. .........+.+.|.+|.|++.|.|+|.|.++.|.|.+
T Consensus         2 ~~P~nl~v~~~~~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~p   80 (86)
T d1tdqa3           2 DSPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGIS-SEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLE   80 (86)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCCSCCSEEEEEEECSSSCC-EEEEEESSCSEEEECCCCTTCCEEEEEEEEETTEECCC
T ss_pred             ccCCCCEEEEecCCEEEEEEeCCCCCccceEEEEecccccc-eEEEeCCCccEEEECCCccccEEEEEEEEEcCCCEECC
Confidence            58999999999999999999999889999999999765443 33334456689999999999999999999999988765


Q ss_pred             C
Q psy8771         282 S  282 (904)
Q Consensus       282 s  282 (904)
                      +
T Consensus        81 ~   81 (86)
T d1tdqa3          81 S   81 (86)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=6.4e-10  Score=91.58  Aligned_cols=86  Identities=17%  Similarity=0.308  Sum_probs=69.4

Q ss_pred             CCCCCCeEEEecC--CceEEEEecCCC--CCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEE
Q psy8771         482 GTAPRDVQVRPLS--SSTMVIQWDEPE--TPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       482 ~~~p~~l~v~~~~--~~~~~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      |.+|.+|.+..+.  .+.|.|+|++|.  +.++.+..|.|+|+..+.   ..|..... ...+.+.|.+|.|++.|.|+|
T Consensus         2 P~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV   78 (104)
T d1n26a3           2 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERS---KTFTTWMVKDLQHHCVIHDAWSGLRHVVQL   78 (104)
T ss_dssp             CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTC---SCCEEEECGGGCSEEEESSCCTTCCEEEEE
T ss_pred             CcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCC---CceeeeccccceEEEEECCCCCCCEEEEEE
Confidence            4789999988764  568999999975  345678999999998764   34545444 566789999999999999999


Q ss_pred             EEEeCCCCCCCCCc
Q psy8771         557 QAFTSVGPGPLSAP  570 (904)
Q Consensus       557 ~a~~~~g~~~~S~~  570 (904)
                      +|.|..|.|.+|+.
T Consensus        79 ra~n~~g~g~wSew   92 (104)
T d1n26a3          79 RAQEEFGQGEWSEW   92 (104)
T ss_dssp             EEEETTTBSCCCCC
T ss_pred             EEEeCCCccCCcCC
Confidence            99999999887764

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.9e-10  Score=94.02  Aligned_cols=68  Identities=16%  Similarity=0.156  Sum_probs=54.6

Q ss_pred             CCCceeeEEEEEEeCCcccc----ceE--EecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCC
Q psy8771         647 SGENIISYELYWNDTYAKAK----HHR--RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY  714 (904)
Q Consensus       647 ~~~~~~~y~v~~~~~~~~~~----~~~--~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~  714 (904)
                      .++.+.+|+|.|+.......    ...  .....+++.|.||+|++.|.|+|+|+|..|.|.+|..+.++|.+.
T Consensus        41 ~~~~i~gY~v~y~~~~~~~~~~~~~~~~v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~~~~~~T~e~  114 (120)
T d1ujta_          41 QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE  114 (120)
T ss_dssp             CCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred             CCCcEEEEEEEeeecccCCCCcceEEEEeccCceeEEEECCCCCCCEEEEEEEEEeCCcCcCCCCCEEEEeCCC
Confidence            35678899999987654322    222  234567899999999999999999999999999999999999876

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.05  E-value=4.5e-10  Score=88.89  Aligned_cols=80  Identities=23%  Similarity=0.385  Sum_probs=67.8

Q ss_pred             CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCC
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPP  281 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~  281 (904)
                      ++|.+|++...+.+++.|+|+++.+.+.+|.|.|+..+.. ..........+.+.|.+|.|++.|.|+|.|.++.|.|.+
T Consensus         1 DaP~~l~v~~~t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~   79 (87)
T d1qr4a1           1 DNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGK-KNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRHKSKP   79 (87)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTCC-EEEEEECTTCSEEEEESCCSSCEEEEEEEEESSSCBCCC
T ss_pred             CcCcCcEEEEecCCEEEEEEECCCCCcceeEEEeecCCcc-eeEEeCCCCcCEEEECCCCcCCEEEEEEEEEcCCCCccC
Confidence            4789999999999999999999988899999999976433 333334556689999999999999999999999998765


Q ss_pred             C
Q psy8771         282 S  282 (904)
Q Consensus       282 s  282 (904)
                      +
T Consensus        80 ~   80 (87)
T d1qr4a1          80 T   80 (87)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=9.7e-10  Score=87.79  Aligned_cols=78  Identities=24%  Similarity=0.423  Sum_probs=65.7

Q ss_pred             cceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc--eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCC
Q psy8771         625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH--HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA  702 (904)
Q Consensus       625 ~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~  702 (904)
                      +||++.+++.+++.|+|.++   .+.+.+|.|+|...++....  ....+..+++.|.||.|++.|.|+|.|++..|.|.
T Consensus         1 rnl~v~~~t~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~t~~~l~~L~p~t~Y~~~V~a~~~~g~s~   77 (91)
T d1fnaa_           1 RDLEVVAATPTSLLISWDAP---AVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSP   77 (91)
T ss_dssp             CCCEEEEECSSCEEEECCCC---SSCCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECTTCCSS
T ss_pred             CCCEEEEeCCCEEEEEEEcc---ceEecEEEEEEEcCCCCceeEEEEeCCCccEEEeCCCCCCCEEEEEEEEEeCCccCC
Confidence            58999999999999999986   35789999999988665542  23445678999999999999999999999999987


Q ss_pred             CCC
Q psy8771         703 TTP  705 (904)
Q Consensus       703 ~s~  705 (904)
                      ++.
T Consensus        78 ~~s   80 (91)
T d1fnaa_          78 ASS   80 (91)
T ss_dssp             CSC
T ss_pred             CcC
Confidence            653

>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=9e-10  Score=92.58  Aligned_cols=95  Identities=12%  Similarity=0.141  Sum_probs=73.4

Q ss_pred             CCCCCcEEEecCCCEEEEEecCCCCCC----CCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEE
Q psy8771         718 APPQNVSCEPLSSTSIRISWEPPPVER----SNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWV  792 (904)
Q Consensus       718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~----~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V  792 (904)
                      .||.+|.+.. +.+++.|+|.+|....    .+..+..|.|+|+..+...+........ ....+.+.+|.+++.|.|+|
T Consensus         7 ~pP~nl~v~~-~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~rV   85 (114)
T d2gysa2           7 PEPRDLQIST-DQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARV   85 (114)
T ss_dssp             CCCEEEEEEE-ETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEEESSSEEEECTTTCCTTCEEEEEE
T ss_pred             CcCCCeEEEE-eCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEeeccCceEEEEeCCCCCCcEEEEEE
Confidence            4799999864 6789999999985322    1335678999999887655544444444 67788999999999999999


Q ss_pred             EEeeCCCC------CCCCCcEEeecCC
Q psy8771         793 LAGTSIGD------GPSSYPITIRTHE  813 (904)
Q Consensus       793 ~a~~~~g~------g~~s~~~~~~t~~  813 (904)
                      +|.+..|.      |++|+++.+.|.+
T Consensus        86 Ra~~~~g~~~~g~wS~WS~~v~~~t~p  112 (114)
T d2gysa2          86 RTRLAPGSRLSGRPSKWSPEVCWDSQP  112 (114)
T ss_dssp             EEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred             EEEeCCCCCCCCCccCCcCCEeeeCcC
Confidence            99998886      5778899999864

>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.04  E-value=5.8e-11  Score=97.74  Aligned_cols=79  Identities=18%  Similarity=0.283  Sum_probs=61.3

Q ss_pred             EEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCcccc--CCCCcee--ecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIEL--TPDDKLP--VGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~--~~~~~~~--~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      |...+.+.+.+.+|+.+.|.|.+ .|.|.|.|.|+|+ +..+  ....+..  ..+++|.|.++  +|+|.|+|.|.|..
T Consensus         6 F~~~~~~~v~v~eG~~~~l~C~~~~~~p~~~v~W~k~-g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~   84 (105)
T d1cs6a2           6 FSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLN-EFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHI   84 (105)
T ss_dssp             CCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEES-STTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEE
T ss_pred             ccCCCCCCEEEeCCCeEEEEEEccCCCCCCEEEEEEe-eccccccccceeeeecCCCEEeecccccccCcEEEEEEEECC
Confidence            44444444999999999999997 6999999999999 5433  2333332  25778999999  69999999999999


Q ss_pred             cceEEEE
Q psy8771         180 GVIETST  186 (904)
Q Consensus       180 g~~~~~~  186 (904)
                      |....+.
T Consensus        85 g~~~~~v   91 (105)
T d1cs6a2          85 DFITKSV   91 (105)
T ss_dssp             TTEEEEE
T ss_pred             CCEEEEE
Confidence            9876553

>d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor common gamma chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=7.5e-10  Score=88.95  Aligned_cols=77  Identities=10%  Similarity=0.185  Sum_probs=55.8

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG  699 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G  699 (904)
                      |.+|.+|.+..++.+++.|+|.++.  ...+..|.|+|+..+...+..........++|.+|.|++.|.|+|+|.+..+
T Consensus         3 P~~P~nl~v~~~~~~~v~l~W~~p~--~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~frVRa~~~~~   79 (95)
T d2b5ic1           3 PWAPENLTLHKLSESQLELNWNNRF--LNHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPL   79 (95)
T ss_dssp             CCCCEEEEEEEEETTEEEEEEECSS--CSTTCEEEEEEEETTCSSCEEEEECSSCEEEECSCCTTSCEEEEEEEECCSS
T ss_pred             CcCCCCCEEEEEeCCEEEEEECCCC--CceeEEEEEEEEcCCCceeeEeeecccceeEcCCCCCCCEEEEEEEEeeCCC
Confidence            3444445544444455555554432  3457889999999888777666666778999999999999999999997654

>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Semaphorin 4d Ig-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=2.6e-10  Score=90.61  Aligned_cols=75  Identities=19%  Similarity=0.246  Sum_probs=59.8

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCcccc-CCCCcee-ecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIEL-TPDDKLP-VGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~-~~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      ..+.+|+++.|.|.+.| |.|.+.|+++ +..+ ....++. ..+++|.|.++  +|+|.|+|.|.|..|..+....|.+
T Consensus         7 ~~~~~G~~~~l~C~~~g-~~~~v~W~~~-g~~l~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~A~n~~g~~~~~~~l~~   84 (92)
T d1olza1           7 HFFKHGGTAELKCSQKS-NLARVFWKFQ-NGVLKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERVKNKTVFQVVAK   84 (92)
T ss_dssp             EEEETTSCEEECCCCSC-TTCEEEEEES-SSBCCCCSSSBCCTTTTCEEECSCCGGGCEEEEEEEEEECSSSEEEEEEEE
T ss_pred             eeEeCCCEEEEEEEeec-cCCceeeecC-cccceeeeeeeecceeeEEEECCCCHHHCcEEEEEEEEcCCCEEEEEEEEE
Confidence            78899999999999999 6689999998 5444 3344443 36778999999  7999999999999998665555544


Q ss_pred             E
Q psy8771         191 Q  191 (904)
Q Consensus       191 ~  191 (904)
                      .
T Consensus        85 ~   85 (92)
T d1olza1          85 H   85 (92)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=7.5e-10  Score=91.17  Aligned_cols=92  Identities=15%  Similarity=0.299  Sum_probs=71.9

Q ss_pred             CCCCCCeEEEecC------CceEEEEecCCCCCC----CceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCe
Q psy8771         482 GTAPRDVQVRPLS------SSTMVIQWDEPETPN----GQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTI  551 (904)
Q Consensus       482 ~~~p~~l~v~~~~------~~~~~l~W~~p~~~~----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~  551 (904)
                      |.||.+|.+....      ..+|.|+|++|...+    ..+..|.|+|+..++   ..|........+.+.+.+|.+++.
T Consensus         1 PdPP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~---~~w~~~~~~~~~~~~i~~L~~~t~   77 (106)
T d1axib2           1 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNE---TKWKMMDPILTTSVPVYSLKVDKE   77 (106)
T ss_dssp             CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTC---SSCEECCCBSSSEEEEEEEETTSC
T ss_pred             CcCCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCC---ccceeeeecccceEEECCCCCCCE
Confidence            3688888875432      347999999986433    256889999998764   457777667778999999999999


Q ss_pred             EEEEEEEEeCCC--CCCCCCcEEEecC
Q psy8771         552 YTIRVQAFTSVG--PGPLSAPVLVKTQ  576 (904)
Q Consensus       552 Y~~~V~a~~~~g--~~~~S~~~~~~t~  576 (904)
                      |.|+|+|.+..|  .|.+|..+.++++
T Consensus        78 Y~frVRa~~~~~g~ws~wS~~v~v~~P  104 (106)
T d1axib2          78 YEVRVRSKQRNSGNYGEFSEVLYVTLP  104 (106)
T ss_dssp             EEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred             EEEEEEEEECCCCCCCCCCCCEEEECC
Confidence            999999998665  3788888877764

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.03  E-value=7.2e-10  Score=88.96  Aligned_cols=83  Identities=20%  Similarity=0.306  Sum_probs=71.4

Q ss_pred             CCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE-EeecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         200 LPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS-EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       200 ~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      .+++|.++++..++.+++.|+|+++.+++.+|.|.|+..+...... .......+.++|.+|.|++.|.|+|+|.|+.|.
T Consensus         3 v~~~P~~l~v~~v~~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~   82 (93)
T d1tdqa1           3 VIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNE   82 (93)
T ss_dssp             SSCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred             cCCcCCCCEEEEeCCCEEEEEEEccccCCCceEEEEEeccCcceeeEEEeCCCceEEEEeCcccceEEEEEEEEEeCCCC
Confidence            4578999999999999999999999889999999999876554433 345556689999999999999999999999998


Q ss_pred             CCCC
Q psy8771         279 GPPS  282 (904)
Q Consensus       279 s~~s  282 (904)
                      +.++
T Consensus        83 s~~~   86 (93)
T d1tdqa1          83 SDAS   86 (93)
T ss_dssp             CCCE
T ss_pred             cCCE
Confidence            8654

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=3.6e-10  Score=91.18  Aligned_cols=81  Identities=16%  Similarity=0.285  Sum_probs=67.4

Q ss_pred             CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE-eecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE-ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ++|.+|++..++.+++.|+|+++.+.+.+|.+.|+.......... ......++++|.+|.|++.|.|+|.|.|..|.|.
T Consensus         3 d~P~~l~v~~vt~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~S~   82 (94)
T d1j8ka_           3 DRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQ   82 (94)
T ss_dssp             CCCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSSCCCC
T ss_pred             CCCCCCEEEEecCCEEEEEEeCCCccccceEEEEEeecCCCceEEEecCCCccEEEECCCCCCCEEEEEEEEEeCCCCcC
Confidence            578999999999999999999998889999999988644322221 2345668899999999999999999999999876


Q ss_pred             CC
Q psy8771         281 PS  282 (904)
Q Consensus       281 ~s  282 (904)
                      +.
T Consensus        83 p~   84 (94)
T d1j8ka_          83 PL   84 (94)
T ss_dssp             CE
T ss_pred             CE
Confidence            54

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=3.5e-10  Score=91.25  Aligned_cols=81  Identities=20%  Similarity=0.356  Sum_probs=67.1

Q ss_pred             CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccce--EEecccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771         621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHH--RRIGLVETYSLTGLYPNTLYYIWLAAQSPR  698 (904)
Q Consensus       621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~--~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~  698 (904)
                      ..+|.+|++.+++.+++.|+|.++.   +.+.+|++.|+.........  ......+++.|.+|.|++.|.|+|+|++..
T Consensus         2 ~d~P~~l~v~~vt~~sv~l~W~~p~---~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   78 (94)
T d1j8ka_           2 IDRPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDD   78 (94)
T ss_dssp             CCCCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSS
T ss_pred             CCCCCCCEEEEecCCEEEEEEeCCC---ccccceEEEEEeecCCCceEEEecCCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            3679999999999999999999863   46889999999876655422  233456799999999999999999999999


Q ss_pred             CCCCCC
Q psy8771         699 GEGATT  704 (904)
Q Consensus       699 G~~~~s  704 (904)
                      |.|.+.
T Consensus        79 g~S~p~   84 (94)
T d1j8ka_          79 MESQPL   84 (94)
T ss_dssp             CCCCCE
T ss_pred             CCcCCE
Confidence            887654

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=2.8e-10  Score=90.71  Aligned_cols=79  Identities=25%  Similarity=0.383  Sum_probs=65.6

Q ss_pred             CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE-eecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE-ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ++|.+|++...+.+++.|+|+++.+.+.+|.|+|+..++...... ......+.+.|.+|.|++.|.|+|+|.|..|.|.
T Consensus         2 daP~nl~v~~~~~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~n~~g~S~   81 (89)
T d1fnha3           2 DAPSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSE   81 (89)
T ss_dssp             CCCEEEEEEEEETTEEEEEEECCSSCCSEEEEEEECTTSCCEECTTCCCTTCCEEEEESCCTTCEEEEEEEEESSSCEEE
T ss_pred             ccCcCCEEEEecCCEEEEEEeCCCcCCceEEEEEeeccCCccEEEEEcCCCccEEEEEeeeCCCEEEEEEEEEcCCCEeC
Confidence            578999999999999999999998889999999997644332221 2334567899999999999999999999988764

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=5.3e-10  Score=92.08  Aligned_cols=92  Identities=13%  Similarity=0.200  Sum_probs=73.7

Q ss_pred             CCCCcceEEEeec------cceEEEeccCCCCCC----CceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEE
Q psy8771         621 YAKPRDLRAVDIQ------ETAVTLAWSKPTHSG----ENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYI  690 (904)
Q Consensus       621 ~~~p~~l~~~~~~------~~~~~l~w~~~~~~~----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v  690 (904)
                      |.||.+|.++...      ..++.|+|.+|...+    ..+..|.|+|+..+...+........+.+.|.+|.+++.|.|
T Consensus         1 PdPP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~~~~~~~~~i~~L~~~t~Y~f   80 (106)
T d1axib2           1 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYEV   80 (106)
T ss_dssp             CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCCBSSSEEEEEEEETTSCEEE
T ss_pred             CcCCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeeeecccceEEECCCCCCCEEEE
Confidence            5689999886543      457999999886433    357889999999888777666666678999999999999999


Q ss_pred             EEEEEcCCCC--CCCCCCeeEEec
Q psy8771         691 WLAAQSPRGE--GATTPPIPVRTK  712 (904)
Q Consensus       691 ~V~a~~~~G~--~~~s~~~~~~t~  712 (904)
                      +|+|.+..|.  |++|..+.++++
T Consensus        81 rVRa~~~~~g~ws~wS~~v~v~~P  104 (106)
T d1axib2          81 RVRSKQRNSGNYGEFSEVLYVTLP  104 (106)
T ss_dssp             EEEEEETTSSCCCCCCCCEEECCC
T ss_pred             EEEEEECCCCCCCCCCCCEEEECC
Confidence            9999986653  788888877764

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=2.3e-10  Score=93.94  Aligned_cols=90  Identities=19%  Similarity=0.231  Sum_probs=60.4

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCC---ceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEE
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNG---QITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQ  557 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~---~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~  557 (904)
                      |.+|.+|.+...+.+++.|+|.+|...++   ....|.|+|+..++.....+.... ......+.+.+|.|++.|.|+|+
T Consensus         2 P~~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVr   81 (101)
T d1iarb2           2 PRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVR   81 (101)
T ss_dssp             CCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSCCEEEECC-----CCCEEEEEE
T ss_pred             cccCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeeeccCccceEEEECCCCCCCEEEEEEE
Confidence            46899999999999999999998765443   345799999987754333222222 24456789999999999999999


Q ss_pred             EEeCCCCCCCCCcE
Q psy8771         558 AFTSVGPGPLSAPV  571 (904)
Q Consensus       558 a~~~~g~~~~S~~~  571 (904)
                      |.+..|.|.+|+..
T Consensus        82 A~~~~g~g~wSewS   95 (101)
T d1iarb2          82 AWAQAYNTTWSEWS   95 (101)
T ss_dssp             EECGGGTCCCCCCC
T ss_pred             EEcCCCCCCCcCCC
Confidence            99999988777653

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=7.5e-10  Score=88.93  Aligned_cols=86  Identities=26%  Similarity=0.279  Sum_probs=70.5

Q ss_pred             CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCC
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPP  281 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~  281 (904)
                      ++|.++++...+.+++.|+|+++.+.+.+|.|.|+..++. ..........+++.|.+|.|++.|.|+|.|.|..|.+.+
T Consensus         3 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~   81 (93)
T d2cuma1           3 EAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQSLLPP   81 (93)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSC-EEEEEECSSCSEEEECSCCTTCEEEEEEEEEBTTBCCCC
T ss_pred             CcCCCCEEEEeCCCEEEEEEEccccccccEEEEEEccccc-cEEEEECCCccEEEEeCccCCCEEEEEEEEEeCCCCCCC
Confidence            5889999999999999999999988899999999986433 333344556689999999999999999999999998875


Q ss_pred             CCCeEEec
Q psy8771         282 SSPAVITT  289 (904)
Q Consensus       282 s~~~~~~t  289 (904)
                      +. ..+.|
T Consensus        82 ~~-~~~tT   88 (93)
T d2cuma1          82 VS-TSFTT   88 (93)
T ss_dssp             EE-EEEEC
T ss_pred             EE-EEEEe
Confidence            43 33443

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=3.6e-10  Score=92.72  Aligned_cols=87  Identities=15%  Similarity=0.098  Sum_probs=58.2

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCC-CCccEEEEEEEEEEccCCCCccEEEEec--CcceEEecCCCCCceEEEEEEEe
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVER-SNGHIVYYKLQFVETGRSDSEASIVTLK--NQTSFVLDELKKWTEYRIWVLAG  795 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~-~~g~~~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~  795 (904)
                      +|.+|.+...+.+++.|+|.+|.... ..+....|.|+|+..+...+........  ....+.+.+|.|++.|.|+|+|.
T Consensus         4 ~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVrA~   83 (101)
T d1iarb2           4 APGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAW   83 (101)
T ss_dssp             CCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSCCEEEECC-----CCCEEEEEEEE
T ss_pred             cCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeeeccCccceEEEECCCCCCCEEEEEEEEE
Confidence            68999999999999999999884221 1224457999999887655533322222  55788999999999999999999


Q ss_pred             eCCCCCCCCC
Q psy8771         796 TSIGDGPSSY  805 (904)
Q Consensus       796 ~~~g~g~~s~  805 (904)
                      +..|.|.+|+
T Consensus        84 ~~~g~g~wSe   93 (101)
T d1iarb2          84 AQAYNTTWSE   93 (101)
T ss_dssp             CGGGTCCCCC
T ss_pred             cCCCCCCCcC
Confidence            9999877765

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=6e-10  Score=91.32  Aligned_cols=62  Identities=18%  Similarity=0.085  Sum_probs=45.7

Q ss_pred             CceeeEEEEEEeCCcccc----------ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEe
Q psy8771         649 ENIISYELYWNDTYAKAK----------HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT  711 (904)
Q Consensus       649 ~~~~~y~v~~~~~~~~~~----------~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t  711 (904)
                      +.+.+|.|+|+.......          .....+...++.|.+|+|++.|.|+|+|++..|.|..+ ...++|
T Consensus        29 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~~~V~a~~~~g~g~~~-~~~~~T  100 (101)
T d2cuia1          29 GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSI-QGTART  100 (101)
T ss_dssp             TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEE-EEEEEC
T ss_pred             ccccceEEEEEecCCCceeeccCCcceeEeecccceeEEEeCCCCcCCEEEEEEEEEeCCcEeCCe-EEEeEE
Confidence            357888888887654322          12234566799999999999999999999999987654 344544

>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor TrkA, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: High affinity nerve growth factor receptor TrkA, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=5.3e-10  Score=92.10  Aligned_cols=76  Identities=18%  Similarity=0.299  Sum_probs=60.3

Q ss_pred             eEEecCCCeEE---EEEEccCCCCeEEEeeCCccccCCCCceee-----------cceEEEEeee--cCCeEEEEEEEec
Q psy8771         115 LEVMLDSPLNL---SCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----------GRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       115 ~~~~~g~~~~l---~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----------~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      +.+..|....+   .|.+.|.|.|.|+|+++ +..+..+.+...           ....|.|.++  +|+|.|+|.|.|.
T Consensus         7 ~~~~~g~~~~~~ci~~~v~G~P~P~v~W~~n-g~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~A~N~   85 (107)
T d1he7a_           7 VQLHTAVEMHHWCIPFSVDGQPAPSLRWLFN-GSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANP   85 (107)
T ss_dssp             CCCCCCCCCCEEEEEEEECCSSCCEEEEEET-TEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEET
T ss_pred             eEECCCeEEEEEEEEEEEEEecCCeEEEEEe-eeEccCccceeeeeeeeeeeeeccceEEEECcccHHHCcEEEEEEEeC
Confidence            55556666665   45899999999999999 777766554432           1246999988  6999999999999


Q ss_pred             CcceEEEEEEEEE
Q psy8771         179 LGVIETSTIVKVQ  191 (904)
Q Consensus       179 ~g~~~~~~~l~v~  191 (904)
                      .|..++++.|.|.
T Consensus        86 ~G~~~~~i~v~v~   98 (107)
T d1he7a_          86 FGQASASIMAAFM   98 (107)
T ss_dssp             TEEEEEEEEECCC
T ss_pred             CCEEEEEEEEEEE
Confidence            9999998888887

>d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor common gamma chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.7e-09  Score=86.86  Aligned_cols=77  Identities=22%  Similarity=0.336  Sum_probs=65.6

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      |.+|.+|++..++.+++.|+|++|..  +.+..|.|+|+....   ..|........+.+.+.+|.|++.|.|+|||.+.
T Consensus         3 P~~P~nl~v~~~~~~~v~l~W~~p~~--~~~~~y~v~y~~~~~---~~~~~~~~~~~~~~~~~~L~p~t~Y~frVRa~~~   77 (95)
T d2b5ic1           3 PWAPENLTLHKLSESQLELNWNNRFL--NHCLEHLVQYRTDWD---HSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFN   77 (95)
T ss_dssp             CCCCEEEEEEEEETTEEEEEEECSSC--STTCEEEEEEEETTC---SSCEEEEECSSCEEEECSCCTTSCEEEEEEEECC
T ss_pred             CcCCCCCEEEEEeCCEEEEEECCCCC--ceeEEEEEEEEcCCC---ceeeEeeecccceeEcCCCCCCCEEEEEEEEeeC
Confidence            47899999999999999999998764  456889999998764   4566776677889999999999999999999876


Q ss_pred             CC
Q psy8771         562 VG  563 (904)
Q Consensus       562 ~g  563 (904)
                      .+
T Consensus        78 ~~   79 (95)
T d2b5ic1          78 PL   79 (95)
T ss_dssp             SS
T ss_pred             CC
Confidence            54

>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.00  E-value=2.3e-10  Score=95.56  Aligned_cols=76  Identities=24%  Similarity=0.350  Sum_probs=56.8

Q ss_pred             eEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCc----------ee--ecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         115 LEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDK----------LP--VGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~----------~~--~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      ..+.+|+++.|.|.+. |.|.+.|+|+|+ +..+.....          ..  .....|.|.++  +|+|.|+|.|.|..
T Consensus        12 ~~v~~G~~v~L~C~~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~N~~   90 (110)
T d1f97a2          12 SSVTIGNRAVLTCSEHDGSPPSEYSWFKD-GISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGY   90 (110)
T ss_dssp             SEEETTSCEEEEEECSCCBSCCEEEEEET-TEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSS
T ss_pred             CEEecCCeEEEEEEeecCCCCCEEEEEeC-CeEecCCCceeEEeecCceEEEeecccceEECCCCccCCEEEEEEEEECC
Confidence            4578999999999986 899999999999 544432211          11  13457999999  69999999999999


Q ss_pred             cceEE--EEEEEEE
Q psy8771         180 GVIET--STIVKVQ  191 (904)
Q Consensus       180 g~~~~--~~~l~v~  191 (904)
                      |....  ...|.|.
T Consensus        91 G~~~~s~~v~l~V~  104 (110)
T d1f97a2          91 GTAMRSEAAHMDAV  104 (110)
T ss_dssp             SCCEECCCEEEEEE
T ss_pred             CcEEEEEEEEEEEE
Confidence            98655  4455554

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=2.1e-09  Score=88.52  Aligned_cols=95  Identities=22%  Similarity=0.303  Sum_probs=71.0

Q ss_pred             CCCCCCcEEEecC-CCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEe
Q psy8771         717 GAPPQNVSCEPLS-STSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAG  795 (904)
Q Consensus       717 ~~~P~~l~~~~~~-~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~  795 (904)
                      ..||.+|.+.... .+.+.|+|.+|. ....+....|+|+|+..++..+..........+.+.|.+|.+++.|.|+|+|.
T Consensus         5 ~dPP~nl~v~~~~~~~~l~v~W~~P~-~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~rVRar   83 (105)
T d1erna2           5 LDAPVGLVARLADESGHVVLRWLPPP-ETPMTSHIRYEVDVSAGNGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRAR   83 (105)
T ss_dssp             CCCCEEEEEEECCC-CCEEEEEECSS-SCSCGGGEEEEEEEEEC-CCCEEEEEEECTTCCEEEECSCCSSCEEEEEEEEE
T ss_pred             cCCCCCCEEEEecCCCcEEEEeeecc-ccccceEEEEEEEEecCCCCCceEEEeecCCccEEEEeCCCCCcEEEEEEEEE
Confidence            3478999998764 567999999886 35567788999999988765443333333377899999999999999999998


Q ss_pred             eCC--CC---CCCCCcEEeecC
Q psy8771         796 TSI--GD---GPSSYPITIRTH  812 (904)
Q Consensus       796 ~~~--g~---g~~s~~~~~~t~  812 (904)
                      +..  +.   |.+|.++.++|+
T Consensus        84 ~~~~~~~G~WSeWS~~v~~~tP  105 (105)
T d1erna2          84 MAEPSFGGFWSAWSEPVSLLTP  105 (105)
T ss_dssp             ECSSSCCBCCCCCCCCEEEECC
T ss_pred             ECCCCCCCCCCCCCCCEEeeCc
Confidence            653  22   577888988873

>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Myosin-binding protein C, slow-type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=6.1e-10  Score=88.48  Aligned_cols=78  Identities=15%  Similarity=0.335  Sum_probs=60.3

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC--ceee----cceEEEEeee--cCCeEEEEEEEec
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD--KLPV----GRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      |+.++++ +.+.+|+++.|.|.+ +.|.|.|.|+|+ +..+..+.  ++.+    +...|.|.++  +|+|.|+|.|.| 
T Consensus         3 i~~~l~~-~~v~~G~~v~l~C~v-~~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n-   78 (90)
T d1x44a1           3 VTKQLED-TTAYCGERVELECEV-SEDDANVKWFKN-GEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG-   78 (90)
T ss_dssp             CSBCCCC-EEEETTEEEEEEEEC-SSSSCCCEEEET-TEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT-
T ss_pred             EEcCCCC-EEEeCCCcEEEEEEE-CCCCceEEEEEe-ecccCCCCCccEEEEEeCCccEEEECccccccCEEEEEEEec-
Confidence            4455677 999999999999998 568899999999 66554432  3432    2348999999  799999999966 


Q ss_pred             CcceEEEEEEEEE
Q psy8771         179 LGVIETSTIVKVQ  191 (904)
Q Consensus       179 ~g~~~~~~~l~v~  191 (904)
                         ...++.|.|+
T Consensus        79 ---~~~~a~l~V~   88 (90)
T d1x44a1          79 ---GQSSAKLSVD   88 (90)
T ss_dssp             ---EEEEEEEEEE
T ss_pred             ---ceEEEEEEEE
Confidence               4566778876

>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=8.1e-10  Score=88.53  Aligned_cols=83  Identities=19%  Similarity=0.283  Sum_probs=62.4

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-Cceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      .+|.|.....+.+.+.+|+++.|.|.+. .|.|.|.|+|+ +..+..+ .++.+    +...|.|.++  +|+|.|+|.|
T Consensus         4 ~~~~f~~~l~~~~~v~~G~~v~l~c~v~-~p~~~v~W~k~-g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a   81 (94)
T d1pd6a_           4 KSTAFQKKLEPAYQVSKGHKIRLTVELA-DHDAEVKWLKN-GQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV   81 (94)
T ss_dssp             TTSSCSEECCSEEEEETTSCEEEEEECS-SSSSCCEEEES-SSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE
T ss_pred             CCCcEEEeCCCCEEECcCCeEEEEEEEC-CCCceEEEEEc-CccceeeeeeEeeeccCCeEEeecCCCCceecEEEEEEE
Confidence            4566766666547899999999999985 58899999999 6666543 33332    3457999999  6999999999


Q ss_pred             EecCcceEEEEEEEEE
Q psy8771         176 ASVLGVIETSTIVKVQ  191 (904)
Q Consensus       176 ~n~~g~~~~~~~l~v~  191 (904)
                      .|    ...++.|.|.
T Consensus        82 ~n----~~~s~~l~V~   93 (94)
T d1pd6a_          82 GG----EKCSTELFVK   93 (94)
T ss_dssp             TT----EEECCEEEEE
T ss_pred             ee----EEEEEEEEEE
Confidence            65    4555667765

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1e-09  Score=89.91  Aligned_cols=90  Identities=23%  Similarity=0.287  Sum_probs=69.5

Q ss_pred             CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC-------CccEEEEec-CcceEEecCCCCCc
Q psy8771         715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD-------SEASIVTLK-NQTSFVLDELKKWT  786 (904)
Q Consensus       715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-------~~~~~~~~~-~~~~~~i~~L~p~t  786 (904)
                      +|+ +|.+|++..++.+++.|+|+++.     |.+.+|.|+|.......       .......+. ...+++|.+|+|++
T Consensus         3 ~Pp-~~~~l~v~~~t~~sv~v~W~pp~-----~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t   76 (101)
T d2cuia1           3 SRP-RLSQLSVTDVTTSSLRLNWEAPP-----GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGT   76 (101)
T ss_dssp             CCC-CCCCCEEESCCSSCEEEECCCCT-----TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTC
T ss_pred             Ccc-CCCCcEEEEECCCEEEEEEEecc-----ccccceEEEEEecCCCceeeccCCcceeEeecccceeEEEeCCCCcCC
Confidence            344 47999999999999999999773     55889999998765321       122233344 88899999999999


Q ss_pred             eEEEEEEEeeCCCCCCCCCcEEeec
Q psy8771         787 EYRIWVLAGTSIGDGPSSYPITIRT  811 (904)
Q Consensus       787 ~Y~~~V~a~~~~g~g~~s~~~~~~t  811 (904)
                      .|.|+|+|++..|.|..+. ..++|
T Consensus        77 ~Y~~~V~a~~~~g~g~~~~-~~~~T  100 (101)
T d2cuia1          77 LYSLTLYGLRGPHKADSIQ-GTART  100 (101)
T ss_dssp             EEEEEEEEECSSSEEEEEE-EEEEC
T ss_pred             EEEEEEEEEeCCcEeCCeE-EEeEE
Confidence            9999999999999887653 45555

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.4e-10  Score=99.46  Aligned_cols=93  Identities=23%  Similarity=0.300  Sum_probs=72.8

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCcc--------------------EEE--Eec-Ccc
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA--------------------SIV--TLK-NQT  775 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~--------------------~~~--~~~-~~~  775 (904)
                      .|.+|.+...+.++|.|+|++|.. ..+|.+.+|.|+|+.........                    ...  ... ..+
T Consensus         4 ~plnl~~~~~sstsv~lsW~pP~~-~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
T d2dtge3           4 ELLKFSYIRTSFDKILLRWEPYWP-PDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP   82 (125)
T ss_dssp             CBCCCSEEEECSSCEEEECCCCCS-SSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred             CCEEEEEEEecCCEEEEEEeCCCc-cCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccC
Confidence            578999999999999999998853 34688999999998754321100                    001  111 678


Q ss_pred             eEEecCCCCCceEEEEEEEeeCCCC-----CCCCCcEEeecC
Q psy8771         776 SFVLDELKKWTEYRIWVLAGTSIGD-----GPSSYPITIRTH  812 (904)
Q Consensus       776 ~~~i~~L~p~t~Y~~~V~a~~~~g~-----g~~s~~~~~~t~  812 (904)
                      .+.|.+|+|++.|.|+|+|+|..|.     |+.|+.+.++|.
T Consensus        83 ~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~  124 (125)
T d2dtge3          83 GWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD  124 (125)
T ss_dssp             EEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred             EEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence            8999999999999999999999995     788998988885

>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3.8e-09  Score=88.63  Aligned_cols=96  Identities=19%  Similarity=0.205  Sum_probs=70.1

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCCCCC------CceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEE
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPETPN------GQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTI  554 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~  554 (904)
                      .|.+|.+|.+. .+.+++.|+|.+|...+      ..+..|.|+|+....................+.+.+|.|++.|.|
T Consensus         5 kP~pP~nl~v~-~~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~   83 (114)
T d2gysa2           5 QPPEPRDLQIS-TDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVA   83 (114)
T ss_dssp             CCCCCEEEEEE-EETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEEESSSEEEECTTTCCTTCEEEE
T ss_pred             cCCcCCCeEEE-EeCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEeeccCceEEEEeCCCCCCcEEEE
Confidence            45799999985 56689999999975432      245689999998765432222222224556788999999999999


Q ss_pred             EEEEEeCCCC------CCCCCcEEEecCC
Q psy8771         555 RVQAFTSVGP------GPLSAPVLVKTQQ  577 (904)
Q Consensus       555 ~V~a~~~~g~------~~~S~~~~~~t~~  577 (904)
                      +|+|.+..|.      |.||..+.+.|.+
T Consensus        84 rVRa~~~~g~~~~g~wS~WS~~v~~~t~p  112 (114)
T d2gysa2          84 RVRTRLAPGSRLSGRPSKWSPEVCWDSQP  112 (114)
T ss_dssp             EEEEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred             EEEEEeCCCCCCCCCccCCcCCEeeeCcC
Confidence            9999998875      4677888888754

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=4.5e-10  Score=90.57  Aligned_cols=89  Identities=17%  Similarity=0.228  Sum_probs=69.3

Q ss_pred             CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEE
Q psy8771         716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLA  794 (904)
Q Consensus       716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a  794 (904)
                      |+.+|.++++...+.+++.|+|+++.  . ++...+|.|.++..++..+ ....... ....+.+.+|.+++.|.|+|+|
T Consensus         3 PP~~P~n~~~~~~~~~si~~~W~p~~--~-~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A   78 (95)
T d1bqua1           3 PPEKPKNLSCIVNEGKKMRCEWDGGR--E-THLETNFTLKSEWATHKFA-DCKAKRDTPTSCTVDYSTVYFVNIEVWVEA   78 (95)
T ss_dssp             CCCCCEEEEEEEETTSCCEEEEECCS--C-CSSCCEEEEEEEETTEECC-CEECCSSCTTEEECSSCCCTTSCEEEEEEE
T ss_pred             CcCCCeeeEEEEccCCEEEEEEeCcc--c-CCCceEEEEEEEEccccee-EeecccccceeeeeeeecCCCcEEEEEEEE
Confidence            55689999999999999999999983  2 4556799999998765433 2222223 6677888999999999999999


Q ss_pred             eeCCCCCCCCCcEEe
Q psy8771         795 GTSIGDGPSSYPITI  809 (904)
Q Consensus       795 ~~~~g~g~~s~~~~~  809 (904)
                      .|..|.+. |.++.+
T Consensus        79 ~N~~G~s~-S~~v~~   92 (95)
T d1bqua1          79 ENALGKVT-SDHINF   92 (95)
T ss_dssp             EETTEEEE-CCCEEE
T ss_pred             EeCCcccc-CCCeec
Confidence            99999876 555654

>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1 (ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: Intercellular cell adhesion molecule-1 (ICAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=4.3e-10  Score=91.56  Aligned_cols=87  Identities=16%  Similarity=0.206  Sum_probs=65.7

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCC--eEEEeeCCccccCCCCcee-ecceEEEEeee--cCCeEEEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMP--FVKWRKGQNIELTPDDKLP-VGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p--~i~W~k~~~~~~~~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      .||.+...+.. ..+.+|++++|.|.+.| .|.|  +|+|+|+ +..+....... .....|.|...  +|+|.|+|.|.
T Consensus         3 ~P~~v~i~p~~-~~v~~G~~~~L~C~v~g~~P~p~~~v~W~~~-~~~l~~~~~~~~~~~s~l~i~~~~~dd~g~ytC~A~   80 (103)
T d1iama1           3 TPERVELAPLP-SWQPVGKQLTLRCQVEGGAPRAQLTVVLLRG-EKELKREPAVGEPAEVTTTVLVRRDHHGAQFSCRTE   80 (103)
T ss_dssp             CCSEEEECCCC-SEECTTSEEEEEEEEECCBCGGGEEEEEEET-TEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEE
T ss_pred             CCCceEEeCCC-ceEeCCCEEEEEEEecCCCCCCceEEEEccc-cccccccccccccceEEEEEeeehhHCCCEEEEEEE
Confidence            57788888887 78899999999999997 5655  6789999 66553321111 13446788776  58899999999


Q ss_pred             ecCcceEEEEEEEEE
Q psy8771         177 SVLGVIETSTIVKVQ  191 (904)
Q Consensus       177 n~~g~~~~~~~l~v~  191 (904)
                      |..|.......+.+.
T Consensus        81 n~~g~~~~~~~~~~s   95 (103)
T d1iama1          81 LDLRPQGLELFENTS   95 (103)
T ss_dssp             EECGGGTSCEEEEEC
T ss_pred             eCCCCccCeEeeeEc
Confidence            999987777777665

>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.3e-09  Score=88.12  Aligned_cols=69  Identities=20%  Similarity=0.245  Sum_probs=57.9

Q ss_pred             eEEecCCCeEEEE------EEccCCCCeEEEeeCCccccCCC-CceeecceEEEEeee--cCCeEEEEEEEecCcceEE
Q psy8771         115 LEVMLDSPLNLSC------VAVGSPMPFVKWRKGQNIELTPD-DKLPVGRNVLTLDRV--TESENYTCIAASVLGVIET  184 (904)
Q Consensus       115 ~~~~~g~~~~l~C------~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~  184 (904)
                      +.+..|....|.|      .+.|.|.|.|.|+|| +..+..+ .++...++.|.|.++  +|+|.|+|.|.|..|....
T Consensus         9 q~~~~g~~~~l~Cp~~~~~~~~~~p~P~i~W~kd-g~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~g~~~   86 (103)
T d1iray2           9 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKD-CKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQY   86 (103)
T ss_dssp             EEEESSSCEEEECTTGGGGCBTTTBCCCCEEEET-TEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEE
T ss_pred             EEEecCCCEEEEcCCccccccCCCCCCEEEEEEC-CccccCCCcEEEecCCEEEEcccccccCcEEEEEEEECcCCEEE
Confidence            6688999999999      678999999999999 7666544 455567789999999  7999999999998876443

>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.7e-09  Score=87.54  Aligned_cols=77  Identities=12%  Similarity=0.141  Sum_probs=64.8

Q ss_pred             eEEecCCCeEEEEEEc-cCCCCeEEEeeCCcccc-C--CCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIEL-T--PDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIV  188 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~-~--~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l  188 (904)
                      +.+.+|+.+.|.|.+. +.|.++|.|+|++.... .  ...++...+++|.|.++  +|+|.|+|.|.|..|....++.|
T Consensus        12 ~~~~~~e~~~l~C~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~L   91 (101)
T d1iray1          12 LVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISA   91 (101)
T ss_dssp             EEEETTSCEEECCCCCGGGCSSEEEEECSSTTSBCCCCTTSSEEEETTEEEETTCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred             EEEeCCCeEEEEeeCCCCCCCceEEEEECCcccccccccceEEeccCCEEEeccceecCCEEEEEEEECCCCeEEEEEEE
Confidence            8889999999999885 78999999999843322 2  23345567789999999  79999999999999999999999


Q ss_pred             EEE
Q psy8771         189 KVQ  191 (904)
Q Consensus       189 ~v~  191 (904)
                      .|.
T Consensus        92 ~V~   94 (101)
T d1iray1          92 KFV   94 (101)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            998

>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Human (Homo sapiens), Ig repeat 27 [TaxId: 9606]

Probab=98.91  E-value=1.9e-10  Score=91.01  Aligned_cols=78  Identities=17%  Similarity=0.246  Sum_probs=63.4

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      |..++.+ +.+.+|+++.|.|.+ +.|.|.+.|+|+ |..+..+.++.+    +...|.|.++  +|+|.|+|.|.|.. 
T Consensus         4 i~~~l~d-~~v~~G~~~~~~c~v-s~p~~~v~W~k~-g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~c~a~n~~-   79 (89)
T d1tiua_           4 VEKPLYG-VEVFVGETAHFEIEL-SEPDVHGQWKLK-GQPLTASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANAK-   79 (89)
T ss_dssp             CSBCCCC-EEEETTSCCCEEEBC-SSSSCCCBCCSS-SCCCCSSSSCEEEECSSCEEEECCSCCSCCCSEECCBCSSCB-
T ss_pred             EEcCCcC-EEEeCCCcEEEEEEE-CCCCcEEEEEEe-eeecccceeEEEEeeceeEEEEEcCCChhcCEEEEEEECceE-
Confidence            5566778 999999999999997 679999999999 777877776654    3457999999  69999999987644 


Q ss_pred             ceEEEEEEEEE
Q psy8771         181 VIETSTIVKVQ  191 (904)
Q Consensus       181 ~~~~~~~l~v~  191 (904)
                         .++.|.|.
T Consensus        80 ---~sa~l~V~   87 (89)
T d1tiua_          80 ---SAANLKVK   87 (89)
T ss_dssp             ---CCEEEEEE
T ss_pred             ---EEEEEEEE
Confidence               45667776

>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), IIb [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), IIb [TaxId: 9606]

Probab=98.91  E-value=2.3e-09  Score=84.35  Aligned_cols=72  Identities=15%  Similarity=0.262  Sum_probs=56.9

Q ss_pred             eEEecCCCeEEEEEEcc-CCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceE-EEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVG-SPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIE-TSTIVKV  190 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~-~~~~l~v  190 (904)
                      ..+.+|++++|.|.+.+ .|.+.+.|+|+ +..+.    ....++.|.|.++  +|+|.|.|.|.|..|... ..+.|.|
T Consensus        10 ~~v~eG~~v~L~C~~~~~~p~~~~~W~k~-g~~~~----~~~~~~~l~i~~v~~~dsG~Y~C~a~n~~g~~~S~~v~l~V   84 (88)
T d2fcba2          10 LEFQEGETIVLRCHSWKDKPLVKVTFFQN-GKSKK----FSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITV   84 (88)
T ss_dssp             SEECTTCCEEEEEEEGGGCCCEEEEEEET-TEEEE----EESSCCEEEETTCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred             CeEecCCeEEEEEEecCCCCCcEEEEEee-ccccc----ccccccccccCccCHHHCCeEEEEEEeCCCCEEeeeEEEEE
Confidence            67889999999999975 56778999999 55442    2235668999988  799999999999988754 4567777


Q ss_pred             E
Q psy8771         191 Q  191 (904)
Q Consensus       191 ~  191 (904)
                      +
T Consensus        85 ~   85 (88)
T d2fcba2          85 Q   85 (88)
T ss_dssp             C
T ss_pred             e
Confidence            6

>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Kin of IRRE-like protein 3, KIRREL3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.6e-10  Score=95.26  Aligned_cols=89  Identities=18%  Similarity=0.278  Sum_probs=68.4

Q ss_pred             CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccCCC--Cceee-----c---ceEEEEeee--c
Q psy8771         100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELTPD--DKLPV-----G---RNVLTLDRV--T  166 (904)
Q Consensus       100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~~~--~~~~~-----~---~~~l~i~~l--~  166 (904)
                      .+..||.|.. +.. +.+.+|+.+.|.|.+.|.| .+.+.|+++ +..+...  .++.+     .   ...|.|.++  +
T Consensus         3 ~V~~Pp~i~~-~~~-~~~~~G~~~~l~C~v~~~~p~~~v~W~~~-~~~i~~~~~~~~~~~~~~~~~~~~s~L~I~~v~~~   79 (115)
T d2crya1           3 TVNGPPIISS-TQT-QHALHGEKGQIKCFIRSTPPPDRIAWSWK-ENVLESGTSGRYTVETISTEEGVISTLTISNIVRA   79 (115)
T ss_dssp             CCCSSCCEEE-ECC-CCCCTTSCCCCCEEECCSSCCSEEEEESS-SCEECSEEETTEEEEEEEETTEEEEEEECTTCCHH
T ss_pred             EEecCCEEec-CCC-EEEecCCEEEEEEEeecCCCeeEEEEeee-eeeEeeeeeeeEeeeeeccccCcEEEEEEeccchh
Confidence            3567888864 445 7788999999999999965 568999999 5555432  33332     1   136999998  5


Q ss_pred             C-CeEEEEEEEecCcceEEEEEEEEE
Q psy8771         167 E-SENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       167 d-~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      | +|.|+|.|.|..|..+..+.|.|+
T Consensus        80 D~~G~Y~C~A~N~~G~~~~~~~L~V~  105 (115)
T d2crya1          80 DFQTIYNCTAWNSFGSDTEIIRLKEQ  105 (115)
T ss_dssp             HHHSCEEEEEECSSCEEEEEECCCCS
T ss_pred             cCCeEEEEEEEECCCeEEEEEEEEEE
Confidence            7 799999999999999999988887

>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), III [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), III [TaxId: 9606]

Probab=98.90  E-value=2.8e-09  Score=83.94  Aligned_cols=72  Identities=10%  Similarity=0.196  Sum_probs=56.3

Q ss_pred             eEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceE-EEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIE-TSTIVKV  190 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~-~~~~l~v  190 (904)
                      ..+.+|++++|.|.+. |.|.+.+.|+|| |..+.    ....++.|.|.++  +|+|.|+|.|.|..|... ..+.|.|
T Consensus        12 ~~v~eG~~v~L~C~~~~~~p~~~~~W~kn-g~~~~----~~~~~~~l~I~~v~~~dsG~Y~C~a~n~~~~~~S~~v~itV   86 (89)
T d1fnla2          12 WVFKEEDPIHLRCHSWKNTALHKVTYLQN-GKDRK----YFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITI   86 (89)
T ss_dssp             SEEETTCCEEEEEEECTTCCCEEEEEEET-TEEEE----EEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred             CeEccCCeEEEEEEecCCCCCcEEEEEEc-ccccc----eeccccccEECccceeccceEEEEEEeCCCCeEEeeEEEEE
Confidence            6788999999999997 456678999999 54432    2235668999998  799999999999888743 4566666


Q ss_pred             E
Q psy8771         191 Q  191 (904)
Q Consensus       191 ~  191 (904)
                      +
T Consensus        87 ~   87 (89)
T d1fnla2          87 T   87 (89)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2.2e-09  Score=86.34  Aligned_cols=90  Identities=13%  Similarity=0.043  Sum_probs=69.3

Q ss_pred             CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEEE
Q psy8771         480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a  558 (904)
                      .||.+|.++++...+.++|.|+|.++.+. +...+|.|.++...+..  .+.... ......+.+.+|.+++.|.|+|+|
T Consensus         2 ~PP~~P~n~~~~~~~~~si~~~W~p~~~~-~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A   78 (95)
T d1bqua1           2 LPPEKPKNLSCIVNEGKKMRCEWDGGRET-HLETNFTLKSEWATHKF--ADCKAKRDTPTSCTVDYSTVYFVNIEVWVEA   78 (95)
T ss_dssp             CCCCCCEEEEEEEETTSCCEEEEECCSCC-SSCCEEEEEEEETTEEC--CCEECCSSCTTEEECSSCCCTTSCEEEEEEE
T ss_pred             cCcCCCeeeEEEEccCCEEEEEEeCcccC-CCceEEEEEEEEcccce--eEeecccccceeeeeeeecCCCcEEEEEEEE
Confidence            46789999999999999999999998754 44579999999875321  122222 245566788899999999999999


Q ss_pred             EeCCCCCCCCCcEEE
Q psy8771         559 FTSVGPGPLSAPVLV  573 (904)
Q Consensus       559 ~~~~g~~~~S~~~~~  573 (904)
                      .|..|.+. |..+.+
T Consensus        79 ~N~~G~s~-S~~v~~   92 (95)
T d1bqua1          79 ENALGKVT-SDHINF   92 (95)
T ss_dssp             EETTEEEE-CCCEEE
T ss_pred             EeCCcccc-CCCeec
Confidence            99999875 554544

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=4.4e-10  Score=96.31  Aligned_cols=94  Identities=18%  Similarity=0.339  Sum_probs=72.1

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCC-CCceeeEEEEEEeCCCCCC-----------cceEE-----------EeecCce
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETP-NGQITGYKVYYTQDQSLPM-----------SAWET-----------QVVDNNQ  539 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~-~~~i~~Y~v~~~~~~~~~~-----------~~~~~-----------~~~~~~~  539 (904)
                      ..|.+|.+...++++|.|+|++|... ++.+.+|.|+|+.......           ..|..           ......+
T Consensus         3 s~plnl~~~~~sstsv~lsW~pP~~~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
T d2dtge3           3 NELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP   82 (125)
T ss_dssp             CCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred             CCCEEEEEEEecCCEEEEEEeCCCccCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccC
Confidence            46789999999999999999998654 4689999999987543211           11211           1114567


Q ss_pred             EEEEcCCCCCCeEEEEEEEEeCCCC-----CCCCCcEEEecC
Q psy8771         540 LTTISDLTPHTIYTIRVQAFTSVGP-----GPLSAPVLVKTQ  576 (904)
Q Consensus       540 ~~~~~~L~p~t~Y~~~V~a~~~~g~-----~~~S~~~~~~t~  576 (904)
                      ++.|.+|.|++.|.|+|+|+|..|.     |+.|..+.++|.
T Consensus        83 ~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~  124 (125)
T d2dtge3          83 GWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD  124 (125)
T ss_dssp             EEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred             EEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence            8999999999999999999999995     678888777764

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=2.2e-08  Score=82.22  Aligned_cols=94  Identities=22%  Similarity=0.250  Sum_probs=68.0

Q ss_pred             CCCCCCCeEEEecC-CceEEEEecCCCCC-CCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEE
Q psy8771         481 PGTAPRDVQVRPLS-SSTMVIQWDEPETP-NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       481 p~~~p~~l~v~~~~-~~~~~l~W~~p~~~-~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a  558 (904)
                      .+.||.+|.+.... .+.+.|+|.+|... ++.+..|.|+|+..+... ..+......+.+++.|.+|.+++.|.|+|||
T Consensus         4 k~dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~-~~~~~~~~~~~t~~~i~~L~p~t~Y~~rVRa   82 (105)
T d1erna2           4 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAG-SVQRVEILEGRTECVLSNLRGRTRYTFAVRA   82 (105)
T ss_dssp             CCCCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCC-EEEEEEECTTCCEEEECSCCSSCEEEEEEEE
T ss_pred             ccCCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCC-ceEEEeecCCccEEEEeCCCCCcEEEEEEEE
Confidence            35789999988764 45799999987543 347789999999876432 2233344466788999999999999999999


Q ss_pred             EeCC--CC---CCCCCcEEEec
Q psy8771         559 FTSV--GP---GPLSAPVLVKT  575 (904)
Q Consensus       559 ~~~~--g~---~~~S~~~~~~t  575 (904)
                      .+..  +.   |.||..+.+.|
T Consensus        83 r~~~~~~~G~WSeWS~~v~~~t  104 (105)
T d1erna2          83 RMAEPSFGGFWSAWSEPVSLLT  104 (105)
T ss_dssp             EECSSSCCBCCCCCCCCEEEEC
T ss_pred             EECCCCCCCCCCCCCCCEEeeC
Confidence            8653  33   45666677766

>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: IgE high affinity receptor alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=4.6e-09  Score=82.78  Aligned_cols=72  Identities=18%  Similarity=0.137  Sum_probs=56.7

Q ss_pred             eEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcce-EEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVI-ETSTIVKV  190 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~-~~~~~l~v  190 (904)
                      ..+.+|++++|.|.+.+. |...+.|+|+ |..+...    .....|.|.++  +|+|.|.|.|.|..|.. +..+.|.|
T Consensus        10 ~~V~eG~~v~L~C~~~~~~~~~~~~w~k~-g~~~~~~----~~~~~l~i~~~~~~dsG~Y~C~a~n~~~~~~S~~v~i~V   84 (89)
T d1f2qa2          10 EVVMEGQPLFLRCHGWRNWDVYKVIYYKD-GEALKYW----YENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITV   84 (89)
T ss_dssp             SEEETTSCEEEEEEEGGGCCEEEEEEEET-TEECCSC----CCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred             CeEeCCCEEEEEEEecCCCCCeEEEEEEe-eeccccc----cccceEEEeeeeeecCcEEEEEEEeCCCCeEeeeEEEEE
Confidence            678899999999999876 4568999999 6655332    24567999998  79999999999988764 35667777


Q ss_pred             E
Q psy8771         191 Q  191 (904)
Q Consensus       191 ~  191 (904)
                      .
T Consensus        85 ~   85 (89)
T d1f2qa2          85 I   85 (89)
T ss_dssp             E
T ss_pred             E
Confidence            7

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=9.7e-09  Score=84.80  Aligned_cols=93  Identities=18%  Similarity=0.233  Sum_probs=65.7

Q ss_pred             CCCCCCCCeE-EEecCCceEEEEecCCCCCCCceeeEEEEEEeCCC-CCCcceEE--Eee---cCceEEEEcCCCCCCeE
Q psy8771         480 EPGTAPRDVQ-VRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQS-LPMSAWET--QVV---DNNQLTTISDLTPHTIY  552 (904)
Q Consensus       480 ~p~~~p~~l~-v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~~~--~~~---~~~~~~~~~~L~p~t~Y  552 (904)
                      .||.+|.+++ +...+.++|.|+|.++.+.+.. ..|.+.|..... .....+..  ...   ....++.+.+|.+++.|
T Consensus         3 ~PP~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~-~~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t~Y   81 (107)
T d1cd9b1           3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETHLP-TSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYM   81 (107)
T ss_dssp             CCCCCCEEEEEEEETTTTEEEEEEECCSCCSSC-CEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCE
T ss_pred             CccCCCcCCEEEEecCCCEEEEEEcCCCCCCCC-cceeEEEEEeecccceeeeeeeeeccccCccccEEEcCCCCcCceE
Confidence            5778999998 4567889999999998766555 566666655432 11122221  111   34567889999999999


Q ss_pred             EEEEEEEeCCCCCCCCCcEEEe
Q psy8771         553 TIRVQAFTSVGPGPLSAPVLVK  574 (904)
Q Consensus       553 ~~~V~a~~~~g~~~~S~~~~~~  574 (904)
                      .|+|+|.|..|.+. |..+.+.
T Consensus        82 ~frV~A~N~~G~s~-S~~~~~~  102 (107)
T d1cd9b1          82 AIWVQAENMLGSSE-SPKLCLD  102 (107)
T ss_dssp             EEEEEEEETTEEEE-CCCEEEC
T ss_pred             EEEEEEEeCCcccc-CCCEEcc
Confidence            99999999999874 5555543

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.1e-08  Score=84.99  Aligned_cols=95  Identities=14%  Similarity=0.203  Sum_probs=68.2

Q ss_pred             CCCCCCCceEEec--CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEE
Q psy8771         579 VPSQPRDLRAVDI--QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL  656 (904)
Q Consensus       579 ~p~~p~~~~~~~~--~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v  656 (904)
                      .|.+|.++.+..+  +.+++.|+|.+|...+                                      ........|.+
T Consensus         7 kP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~--------------------------------------~~~~~~~~y~~   48 (109)
T d1uc6a_           7 KPDPPENVVARPVPSNPRRLEVTWQTPSTWP--------------------------------------DPESFPLKFFL   48 (109)
T ss_dssp             CCCCCEEEEEEECTTCTTCEEEEEECCTTCC--------------------------------------CTTTTTBCEEE
T ss_pred             ECCCCCCCEEEEEecCCCEEEEEEeCCcccC--------------------------------------CCCeeEEEEEE
Confidence            3567777777654  4567888888764311                                      13345678999


Q ss_pred             EEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCC--CCCCCCeeEEe
Q psy8771         657 YWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE--GATTPPIPVRT  711 (904)
Q Consensus       657 ~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~--~~~s~~~~~~t  711 (904)
                      +++..+...+..........+.|.+|.+++.|.|+|+|.+..+.  |.+|..+.++|
T Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt  105 (109)
T d1uc6a_          49 RYRPLILDQWQHVELSNGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP  105 (109)
T ss_dssp             EEEESSSCCCCCEEESSCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred             EEeecCCCceEEeccCCceeEEeCCCCCCCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence            99998887777777777789999999999999999999886321  45555555543

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=9.2e-09  Score=83.69  Aligned_cols=87  Identities=24%  Similarity=0.271  Sum_probs=57.6

Q ss_pred             CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEe
Q psy8771         716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAG  795 (904)
Q Consensus       716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~  795 (904)
                      +.+|| +|.+.. +.+++.|+|.+|.. ........|+|+|+...+.............+.++|.+|.|++.|.|+|+|.
T Consensus         5 k~~Pp-~l~v~~-~~~s~~l~W~~P~~-~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rVRa~   81 (100)
T d2gysa4           5 QMAPP-SLQVTK-DGDSYSLRWETMKM-RYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVR   81 (100)
T ss_dssp             CCCCC-EEEEC----CCCEEEEEC---------CEEEEEEEECSSSCSTTSCEEEEESCSEEECCCCCSSCCCEEEEEEE
T ss_pred             cCCCC-ccEEEE-CCCEEEEEEecCcc-cCCccceEEEEEEeecccceeceeecccCCceEEEeCCCCCCCeEEEEEEEE
Confidence            44455 688875 56789999998853 2223467899999976654433333333378899999999999999999999


Q ss_pred             eCCCC--CCCCC
Q psy8771         796 TSIGD--GPSSY  805 (904)
Q Consensus       796 ~~~g~--g~~s~  805 (904)
                      +..|.  |.+|+
T Consensus        82 ~~~g~~~g~WSe   93 (100)
T d2gysa4          82 TSRTGYNGIWSE   93 (100)
T ss_dssp             ECCTTCCBCCCC
T ss_pred             ECCCCCCCCccC
Confidence            87764  44443

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.5e-08  Score=84.11  Aligned_cols=91  Identities=20%  Similarity=0.282  Sum_probs=67.4

Q ss_pred             CCCCCCeEEEec--CCceEEEEecCCCCC---CCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEE
Q psy8771         482 GTAPRDVQVRPL--SSSTMVIQWDEPETP---NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       482 ~~~p~~l~v~~~--~~~~~~l~W~~p~~~---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      |.+|.++.+..+  +.++|.|+|++|...   .+....|.++++....   ..|........+.+.|.+|.+++.|.|+|
T Consensus         8 P~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~---~~~~~~~~~~~~~~~i~~L~~~t~Y~~rV   84 (109)
T d1uc6a_           8 PDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLIL---DQWQHVELSNGTAHTITDAYAGKEYIIQV   84 (109)
T ss_dssp             CCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSS---CCCCCEEESSCSEEEETTCCSSSCEEEEE
T ss_pred             CCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCC---CceEEeccCCceeEEeCCCCCCCEEEEEE
Confidence            578999998765  567899999997532   2356789999988764   34556666778889999999999999999


Q ss_pred             EEEeCCCC--CCCCCcEEEec
Q psy8771         557 QAFTSVGP--GPLSAPVLVKT  575 (904)
Q Consensus       557 ~a~~~~g~--~~~S~~~~~~t  575 (904)
                      +|.+..+.  |.||..+.+++
T Consensus        85 rA~~~~~g~wS~WS~~~~~tt  105 (109)
T d1uc6a_          85 AAKDNEIGTWSDWSVAAHATP  105 (109)
T ss_dssp             ECCBSSSCCCCCCCEEEEECC
T ss_pred             EEEECCCCCcCCCCCCEEeEC
Confidence            99875331  44555555543

>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=98.75  E-value=4.2e-09  Score=86.88  Aligned_cols=76  Identities=20%  Similarity=0.334  Sum_probs=57.0

Q ss_pred             eEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCCC-------Ccee-ecceEEEEeee--cCCe---EEEEEEEecCc
Q psy8771         115 LEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTPD-------DKLP-VGRNVLTLDRV--TESE---NYTCIAASVLG  180 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~-------~~~~-~~~~~l~i~~l--~d~g---~Y~c~a~n~~g  180 (904)
                      .++.+|+.+.|.|.+ .|.|.|.|.|+|+ +..+...       .++. ..+++|.|.++  +|+|   .|.|.|.|..|
T Consensus        12 ~t~~EG~~~~L~C~v~~G~P~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~gd~g~Y~C~A~N~~g   90 (111)
T d1biha2          12 KTPIEGRPFQLDCVLPNAYPKPLITWKKR-LSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAV   90 (111)
T ss_dssp             ECCBTTEEEEECCCCCEEESCCEEEEEEE-ETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTC
T ss_pred             ccccCCCeEEEEEEcccCCCCCEEEEEeC-CccccccccceeeeeeeccccccccEEeeeEeeccCCceEEEEEEEeCCC
Confidence            567899999999997 8999999999998 4433221       2233 25789999999  4555   79999999999


Q ss_pred             ceEEEEEEEEE
Q psy8771         181 VIETSTIVKVQ  191 (904)
Q Consensus       181 ~~~~~~~l~v~  191 (904)
                      ..+....+.+.
T Consensus        91 ~~~~~~~~~~i  101 (111)
T d1biha2          91 DEEVVLVEYEI  101 (111)
T ss_dssp             SSCEEEEEEEE
T ss_pred             CceEEEEEEEe
Confidence            87665544433

>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), III [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), III [TaxId: 9606]

Probab=98.74  E-value=4.5e-09  Score=81.85  Aligned_cols=70  Identities=16%  Similarity=0.246  Sum_probs=55.4

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeE-EEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFV-KWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i-~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      .+|.|...|.. .++.+|++++|.|.+.|.|.+.+ .|+|+ +..+.      .....|.|.++  +|+|.|+|.|.|..
T Consensus         4 Pkpvi~~~P~~-~~v~~G~~vtL~C~~~~~~~~~~~~~~~~-~~~~~------~~~~~l~i~~~~~~d~G~Y~C~a~~s~   75 (84)
T d1fnla1           4 PKAVVFLEPQW-YSVLEKDSVTLKCQGAYSPEDNSTQWFHN-ESLIS------SQASSYFIDAATVNDSGEYRCQTNLST   75 (84)
T ss_dssp             CCCEEEEESCC-SEEETTCCEEEEEECCCBTTBCCCEEEET-TEEEE------SSCSEEEESSCCGGGCEEEEEECSSSC
T ss_pred             CCCEEEECCCC-cEEeCCCeEEEEEEeccCCCCeEEEEeee-ceeee------ecceeeEecCCcccCCEEEEEEccCCC
Confidence            34667777877 89999999999999999999865 56677 54332      35568999999  69999999998754


Q ss_pred             c
Q psy8771         180 G  180 (904)
Q Consensus       180 g  180 (904)
                      +
T Consensus        76 ~   76 (84)
T d1fnla1          76 L   76 (84)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), IIb [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), IIb [TaxId: 9606]

Probab=98.72  E-value=8.7e-09  Score=80.43  Aligned_cols=76  Identities=16%  Similarity=0.296  Sum_probs=58.7

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      |.|...|.. ..+.+|++++|.|.+.|.|.+ .+.|+++ +..+..      ..+.|.|.++  +|+|.|+|.|.|..++
T Consensus         5 p~i~~~P~~-~~v~~G~~v~L~C~~~~~~~~~~~~w~~~-g~~~~~------~~~~l~i~~v~~~dsG~Y~C~a~ns~~S   76 (85)
T d2fcba1           5 AVLKLEPQW-INVLQEDSVTLTCRGTHSPESDSIQWFHN-GNLIPT------HTQPSYRFKANNNDSGEYTCQTGQTSLS   76 (85)
T ss_dssp             CEEEEESCC-SEEETTCEEEEEEECSSCCCTTCCEEEET-TEECTT------CCSSEEEEECCGGGCEEEEEECTTSBCC
T ss_pred             CEEEECCCC-eEEcCCCeEEEEEEEeeccceeEEEeecc-cccccc------cccceEEeeccccCCcEEEEECCCCccc
Confidence            457777777 889999999999999999987 5788998 655543      4567889888  6999999999886543


Q ss_pred             eEEEEEEEE
Q psy8771         182 IETSTIVKV  190 (904)
Q Consensus       182 ~~~~~~l~v  190 (904)
                        ..+.|.|
T Consensus        77 --~~v~l~V   83 (85)
T d2fcba1          77 --DPVHLTV   83 (85)
T ss_dssp             --CCEEEEE
T ss_pred             --ccEEEEE
Confidence              3344554

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=2e-08  Score=81.58  Aligned_cols=88  Identities=20%  Similarity=0.284  Sum_probs=58.8

Q ss_pred             CCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771         481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF  559 (904)
Q Consensus       481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~  559 (904)
                      ++.|| +|.+.. +.+++.|+|.+|...++ .+..|.|+|+...+. ............+.+.+.+|.|++.|.|+|||.
T Consensus         5 k~~Pp-~l~v~~-~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rVRa~   81 (100)
T d2gysa4           5 QMAPP-SLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTAT-WKDSKTETLQNAHSMALPALEPSTRYWARVRVR   81 (100)
T ss_dssp             CCCCC-EEEEC----CCCEEEEEC--------CEEEEEEEECSSSC-STTSCEEEEESCSEEECCCCCSSCCCEEEEEEE
T ss_pred             cCCCC-ccEEEE-CCCEEEEEEecCcccCCccceEEEEEEeecccc-eeceeecccCCceEEEeCCCCCCCeEEEEEEEE
Confidence            34556 688765 45789999999876554 567899999976643 223334444567889999999999999999999


Q ss_pred             eCCCC--CCCCCcE
Q psy8771         560 TSVGP--GPLSAPV  571 (904)
Q Consensus       560 ~~~g~--~~~S~~~  571 (904)
                      +..|.  |.+|+..
T Consensus        82 ~~~g~~~g~WSeWS   95 (100)
T d2gysa4          82 TSRTGYNGIWSEWS   95 (100)
T ss_dssp             ECCTTCCBCCCCCC
T ss_pred             ECCCCCCCCccCCC
Confidence            87763  5566543

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.68  E-value=2.7e-08  Score=81.97  Aligned_cols=92  Identities=26%  Similarity=0.426  Sum_probs=64.3

Q ss_pred             CCCCCCCCcEE-EecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCC--ccEE--EEec---CcceEEecCCCCCc
Q psy8771         715 VPGAPPQNVSC-EPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS--EASI--VTLK---NQTSFVLDELKKWT  786 (904)
Q Consensus       715 ~p~~~P~~l~~-~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~--~~~~--~~~~---~~~~~~i~~L~p~t  786 (904)
                      .|+.+|.++++ .....++|+++|.++.  +.+.+ ..|.+.|........  ....  ....   ....+++.+|.+++
T Consensus         3 ~PP~~P~~v~~i~~~~~~sv~~sW~p~~--d~~~~-~~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t   79 (107)
T d1cd9b1           3 YPPASPSNLSCLMHLTTNSLVCQWEPGP--ETHLP-TSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQ   79 (107)
T ss_dssp             CCCCCCEEEEEEEETTTTEEEEEEECCS--CCSSC-CEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTS
T ss_pred             CccCCCcCCEEEEecCCCEEEEEEcCCC--CCCCC-cceeEEEEEeecccceeeeeeeeeccccCccccEEEcCCCCcCc
Confidence            35568999985 5678899999999873  34444 566666665432211  1111  1111   56789999999999


Q ss_pred             eEEEEEEEeeCCCCCCCCCcEEee
Q psy8771         787 EYRIWVLAGTSIGDGPSSYPITIR  810 (904)
Q Consensus       787 ~Y~~~V~a~~~~g~g~~s~~~~~~  810 (904)
                      .|.|+|.|.|..|.+. |.++.+.
T Consensus        80 ~Y~frV~A~N~~G~s~-S~~~~~~  102 (107)
T d1cd9b1          80 YMAIWVQAENMLGSSE-SPKLCLD  102 (107)
T ss_dssp             CEEEEEEEEETTEEEE-CCCEEEC
T ss_pred             eEEEEEEEEeCCcccc-CCCEEcc
Confidence            9999999999999885 5666653

>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: IgE high affinity receptor alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=8e-09  Score=79.92  Aligned_cols=77  Identities=18%  Similarity=0.269  Sum_probs=55.2

Q ss_pred             CeEEcCCCCceEEecCCCeEEEEEEccCCCCeE-EEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771         105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFV-KWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV  181 (904)
Q Consensus       105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i-~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~  181 (904)
                      |.|...|.. ..+.+|+.++|.|.+.|.|.+.. .|+++ +..+..      .+..|.|.++  +|+|.|+|.|.|..++
T Consensus         2 P~It~~P~~-~~v~~G~~v~L~C~~~~~~~~~~~~~~~~-~~~~~~------~~~~l~i~~v~~~d~G~Y~C~a~~s~~S   73 (82)
T d1f2qa1           2 PKVSLNPPW-NRIFKGENVTLTCNGNNFFEVSSTKWFHN-GSLSEE------TNSSLNIVNAKFEDSGEYKCQHQQVNES   73 (82)
T ss_dssp             CCCEEESSC-SEEETTCCEEEECCTTCC----CCEEEET-TEECSC------CSSEEEECSCCGGGCEEEEEECTTSSCC
T ss_pred             CEEEEcCCC-eEEeCCCeEEEEEEEeeeeeecceeeeee-eeeeec------ccceeEECCCChhhCCcEEEEecCCCCc
Confidence            566667766 88999999999999999999854 56777 554432      4567999999  6999999999875543


Q ss_pred             eEEEEEEEEE
Q psy8771         182 IETSTIVKVQ  191 (904)
Q Consensus       182 ~~~~~~l~v~  191 (904)
                        ..+.|.|.
T Consensus        74 --~~v~l~V~   81 (82)
T d1f2qa1          74 --EPVYLEVF   81 (82)
T ss_dssp             --CCEEEEEE
T ss_pred             --ccEEEEEE
Confidence              34455553

>d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=8.2e-08  Score=76.31  Aligned_cols=86  Identities=17%  Similarity=0.223  Sum_probs=60.9

Q ss_pred             CCCCCCeEEEec-CCceEEEEecCCCCCCC----ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEE
Q psy8771         482 GTAPRDVQVRPL-SSSTMVIQWDEPETPNG----QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRV  556 (904)
Q Consensus       482 ~~~p~~l~v~~~-~~~~~~l~W~~p~~~~~----~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V  556 (904)
                      |.||.||++... .++.+.|+|++|.....    ....|.|+|+..++   ..|........+.+   .|.|++.|.|+|
T Consensus         2 PdPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~---~~~~~~~~~~~t~~---~L~p~~~Y~v~V   75 (94)
T d3d85d3           2 PDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSK---REKKDRVFTDKTSA---TVICRKNASISV   75 (94)
T ss_dssp             CCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC---------CEEEESSSEE---EECCCSSCEEEE
T ss_pred             CCCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCC---CccEEeccccceEE---EecCCCCEEEEE
Confidence            478999999875 35679999999864332    36899999998664   34555554444443   478999999999


Q ss_pred             EEEeCCCCCCCCCcEEE
Q psy8771         557 QAFTSVGPGPLSAPVLV  573 (904)
Q Consensus       557 ~a~~~~g~~~~S~~~~~  573 (904)
                      ||.+..+.|.+|+...+
T Consensus        76 Ra~~~~~~g~WSeWS~~   92 (94)
T d3d85d3          76 RAQDRYYSSSWSEWASV   92 (94)
T ss_dssp             EEEESSSCCCCCCCEEE
T ss_pred             EEecCCCCCCCccCcCC
Confidence            99999999999988765

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.8e-08  Score=81.53  Aligned_cols=85  Identities=13%  Similarity=0.155  Sum_probs=59.8

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCc--cEEEEec-CcceEEecCCCCCceEEEEEEEe
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE--ASIVTLK-NQTSFVLDELKKWTEYRIWVLAG  795 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~--~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~  795 (904)
                      +|.+|++...+.+. .|+|++|.  ..+|..  |.+++...+...+.  ..+.... ....+++.+|.++..|.|||+|.
T Consensus         3 ~P~nv~v~s~n~~~-~L~W~pP~--~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~fRV~A~   77 (98)
T d1fyhb1           3 TPTNVTIESYNMNP-IVYWEYQI--MPQVPV--FTVEVKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRVKAR   77 (98)
T ss_dssp             CCEEEEEECBSSCC-EEEEECCC--CSSCCE--EEEEEEETTCSSSCCEEEEEEESSSEEECGGGCCSTTSCEEEEEEEE
T ss_pred             cCCceEEEEeCCcE-EEEECCCC--CCCCCc--eeEEEEEeccccceeEEeeeecccceeeeEecccCCCCEEEEEEEEE
Confidence            58999998876555 69999984  445555  44444444333332  2333344 66778889999999999999999


Q ss_pred             eCCCCCCCCCcEE
Q psy8771         796 TSIGDGPSSYPIT  808 (904)
Q Consensus       796 ~~~g~g~~s~~~~  808 (904)
                      |..|.|.++++-.
T Consensus        78 n~~g~S~ws~s~~   90 (98)
T d1fyhb1          78 VGQKESAYAKSEE   90 (98)
T ss_dssp             ETTEECCCEECCC
T ss_pred             cCCcccCCccCCC
Confidence            9999988876443

>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2 (ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: Intercellular cell adhesion molecule-2 (ICAM-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.4e-09  Score=84.39  Aligned_cols=76  Identities=13%  Similarity=0.080  Sum_probs=51.9

Q ss_pred             eEEecCCCeEEEEEEcc-C--CCCeEEEeeCCccccCCCCcee----ec--ceEEEEeee--cCCeEEEEEEEecCcceE
Q psy8771         115 LEVMLDSPLNLSCVAVG-S--PMPFVKWRKGQNIELTPDDKLP----VG--RNVLTLDRV--TESENYTCIAASVLGVIE  183 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g-~--p~p~i~W~k~~~~~~~~~~~~~----~~--~~~l~i~~l--~d~g~Y~c~a~n~~g~~~  183 (904)
                      ..+.+|+.++|.|.+.| .  |.++|+|+|+ +..+.......    ..  ...|.|...  +|+|.|+|+|.|..|...
T Consensus        12 ~~v~~G~~v~l~C~v~g~~p~p~~~i~W~~~-~~~i~~~~~~~~~~~~~~~~s~l~~~~~~~d~g~~ytC~A~n~~~~~~   90 (106)
T d1zxqa1          12 TLVAVGKSFTIECRVPTVEPLDSLTLFLFRG-NETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAVLDLMSRG   90 (106)
T ss_dssp             SEECTTSEEEEEEEECSCBCGGGEEEEEEET-TEEEEEEECCSSTTCTTCEEEEEEEECCGGGGGCEEEEEEEEECGGGT
T ss_pred             CEEeCCCEEEEEEEEeCcccCCCceEEEEcC-CEEeeecccceEeecccceeEEEEEeeehhcCCcEEEEEEEecCCCCC
Confidence            67889999999999997 4  4558999999 66554321111    11  123555544  477899999999998765


Q ss_pred             EEEEEEEE
Q psy8771         184 TSTIVKVQ  191 (904)
Q Consensus       184 ~~~~l~v~  191 (904)
                      ....+.+.
T Consensus        91 ~~~~~~~s   98 (106)
T d1zxqa1          91 GNIFHKHS   98 (106)
T ss_dssp             CCEEEEEC
T ss_pred             CeeEeccc
Confidence            55555544

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=2.8e-08  Score=80.40  Aligned_cols=86  Identities=10%  Similarity=0.080  Sum_probs=59.9

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRVQAFTS  561 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V~a~~~  561 (904)
                      +|.+|++...+... .|+|++|...++...  .+++..........|.....  .....+.+.+|.++..|.|||+|+|+
T Consensus         3 ~P~nv~v~s~n~~~-~L~W~pP~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~fRV~A~n~   79 (98)
T d1fyhb1           3 TPTNVTIESYNMNP-IVYWEYQIMPQVPVF--TVEVKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRVKARVG   79 (98)
T ss_dssp             CCEEEEEECBSSCC-EEEEECCCCSSCCEE--EEEEEETTCSSSCCEEEEEEESSSEEECGGGCCSTTSCEEEEEEEEET
T ss_pred             cCCceEEEEeCCcE-EEEECCCCCCCCCce--eEEEEEeccccceeEEeeeecccceeeeEecccCCCCEEEEEEEEEcC
Confidence            68899998877554 699999987777554  44444443332232322222  34455678899999999999999999


Q ss_pred             CCCCCCCCcEE
Q psy8771         562 VGPGPLSAPVL  572 (904)
Q Consensus       562 ~g~~~~S~~~~  572 (904)
                      .|.|.+++...
T Consensus        80 ~g~S~ws~s~~   90 (98)
T d1fyhb1          80 QKESAYAKSEE   90 (98)
T ss_dssp             TEECCCEECCC
T ss_pred             CcccCCccCCC
Confidence            99888876443

>d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=5.5e-07  Score=71.33  Aligned_cols=57  Identities=9%  Similarity=-0.082  Sum_probs=39.0

Q ss_pred             CceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCee
Q psy8771         649 ENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIP  708 (904)
Q Consensus       649 ~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~  708 (904)
                      .....|.|+|+..+...+........+.   ..|.|++.|.|+|+|.+..|.|.+|+--.
T Consensus        35 ~~~L~Yev~y~~~~~~~~~~~~~~~~t~---~~L~p~~~Y~v~VRa~~~~~~g~WSeWS~   91 (94)
T d3d85d3          35 YFSLTFCVQVQGKSKREKKDRVFTDKTS---ATVICRKNASISVRAQDRYYSSSWSEWAS   91 (94)
T ss_dssp             TSCEEEEEEEECC------CEEEESSSE---EEECCCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred             eEEEEEEEEEEECCCCccEEeccccceE---EEecCCCCEEEEEEEecCCCCCCCccCcC
Confidence            3478899999987766665444443333   45789999999999999988888886543

>d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-10 receptor 1, IL-10R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=2e-07  Score=74.88  Aligned_cols=83  Identities=17%  Similarity=0.160  Sum_probs=59.9

Q ss_pred             CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec---CcceEEecCCCCCceEEEEEEEe
Q psy8771         719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK---NQTSFVLDELKKWTEYRIWVLAG  795 (904)
Q Consensus       719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t~Y~~~V~a~  795 (904)
                      +|.+|++... .....|+|++|+.   +|....|.|+|+..+...|........   ....+.+.+|.++..|.|||+|.
T Consensus         6 ~P~nv~~~s~-n~~~~L~W~pp~~---~g~~~~Y~Ve~~~~~~~~W~~v~~c~~~t~~~~~~~~~~l~~~~~Y~fRVrA~   81 (99)
T d1y6kr1           6 SPPSVWFEAE-FFHHILHWTPIPQ---QSESTCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVRAV   81 (99)
T ss_dssp             CCSCEEEEEE-TTEEEEEECCCTT---CCTTCEEEEEEEETTSCCCEEEEEEESSSEEECGGGGTTGGGSSCEEEEEEEE
T ss_pred             CCCcceEEEE-CCEEEEEEcCCCC---cCCCCEEEEEEEECCCcceEEEEeeccccccceeeeeeecCCCCEEEEEEEEE
Confidence            3789998765 4567899998853   233457999999877665533322222   23344678999999999999999


Q ss_pred             eCCCCCCCCC
Q psy8771         796 TSIGDGPSSY  805 (904)
Q Consensus       796 ~~~g~g~~s~  805 (904)
                      +..|.|.++.
T Consensus        82 n~~g~S~Ws~   91 (99)
T d1y6kr1          82 DGSRHSQWTV   91 (99)
T ss_dssp             ETTEECCCEE
T ss_pred             cCCCcCCCcc
Confidence            9999888765

>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD2-binding domain of CD58, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=3.5e-07  Score=72.78  Aligned_cols=72  Identities=11%  Similarity=0.257  Sum_probs=53.0

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccC------------CCCceee--cceEEEEeee--cCCeEEEEEEEec
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT------------PDDKLPV--GRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~------------~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      +.+..|++++|.|.. +.|.+.|.|+++ +..+.            ...+...  .+++|.|.++  +|+|.|+|.|.|.
T Consensus         5 v~~~~G~sVtl~c~~-~~p~~~v~W~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~l~~~DsG~Y~c~~~n~   82 (93)
T d1ccza1           5 IYGVVYGNVTFHVPS-NVPLKEVLWKKQ-KDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI   82 (93)
T ss_dssp             EEEETTCCEEECCCC-SSCCSCEEEEET-TEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred             EEEEECCCEEEEecC-CCCCcEEEEEEe-ccccceeeecceeeCCCccceEEEcCCeeEEEEEecChhhCEEEEEEEECC
Confidence            778899999999975 568899999998 43321            0122222  4568999999  7999999999887


Q ss_pred             CcceEEEEEEEE
Q psy8771         179 LGVIETSTIVKV  190 (904)
Q Consensus       179 ~g~~~~~~~l~v  190 (904)
                      .+..+  ..|.|
T Consensus        83 ~~t~~--~~l~V   92 (93)
T d1ccza1          83 TDTMK--FFLYV   92 (93)
T ss_dssp             CSCEE--EEEEE
T ss_pred             CcEEE--EEEEE
Confidence            77554  44443

>d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-10 receptor 1, IL-10R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=5.9e-07  Score=71.99  Aligned_cols=81  Identities=16%  Similarity=0.212  Sum_probs=60.3

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceE----EEEcCCCCCCeEEEEEEE
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQL----TTISDLTPHTIYTIRVQA  558 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~L~p~t~Y~~~V~a  558 (904)
                      +|.+|++...+ ....|+|++|...++. ..|.|+|+....   ..|..+.. .+.+.    +.+.+|.++..|.|||+|
T Consensus         6 ~P~nv~~~s~n-~~~~L~W~pp~~~g~~-~~Y~Ve~~~~~~---~~W~~v~~c~~~t~~~~~~~~~~l~~~~~Y~fRVrA   80 (99)
T d1y6kr1           6 SPPSVWFEAEF-FHHILHWTPIPQQSES-TCYEVALLRYGI---ESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVRA   80 (99)
T ss_dssp             CCSCEEEEEET-TEEEEEECCCTTCCTT-CEEEEEEEETTS---CCCEEEEEEESSSEEECGGGGTTGGGSSCEEEEEEE
T ss_pred             CCCcceEEEEC-CEEEEEEcCCCCcCCC-CEEEEEEEECCC---cceEEEEeeccccccceeeeeeecCCCCEEEEEEEE
Confidence            57799987666 5677999988766554 579999998763   45665533 22222    356789999999999999


Q ss_pred             EeCCCCCCCCC
Q psy8771         559 FTSVGPGPLSA  569 (904)
Q Consensus       559 ~~~~g~~~~S~  569 (904)
                      +|..|.|.|+.
T Consensus        81 ~n~~g~S~Ws~   91 (99)
T d1y6kr1          81 VDGSRHSQWTV   91 (99)
T ss_dssp             EETTEECCCEE
T ss_pred             EcCCCcCCCcc
Confidence            99999887764

>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Myelin oligodendrocyte glycoprotein (MOG)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.25  E-value=5.4e-06  Score=70.19  Aligned_cols=82  Identities=17%  Similarity=0.271  Sum_probs=58.4

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCC---CCeEEEeeCCcccc----------------CCCCceee-------cceEEEE
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSP---MPFVKWRKGQNIEL----------------TPDDKLPV-------GRNVLTL  162 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p---~p~i~W~k~~~~~~----------------~~~~~~~~-------~~~~l~i  162 (904)
                      .+... +.+..|++++|.|.+.+..   ...|.|++.+....                ....|...       ++.+|.|
T Consensus         7 ~p~~~-V~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I   85 (126)
T d1pkoa_           7 GPGHP-IRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRI   85 (126)
T ss_dssp             CCSSC-EEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEE
T ss_pred             CCCCC-EEEEcCCcEEEEEEEECcCCCCceEEEEeecCCcceEEEEEeccccccccccccceeEEEeeccccCCeEEEEE
Confidence            33344 8999999999999986433   34689998632210                01122221       2458999


Q ss_pred             eee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         163 DRV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       163 ~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      .++  +|+|.|.|.+.+..+..+....|.|.
T Consensus        86 ~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~  116 (126)
T d1pkoa_          86 QNVRFSDEGGYTCFFRDHSYQEEAAVELKVE  116 (126)
T ss_dssp             SSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             EEEchhHCeEEEEEEEECCCEEEEEEEEEEe
Confidence            999  69999999999988888888888887

>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD2, first domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.23  E-value=1.2e-06  Score=69.78  Aligned_cols=76  Identities=14%  Similarity=0.248  Sum_probs=54.7

Q ss_pred             eEEecCCCeEEEEEEccC--CCCeEEEeeCCccccC----------CCCcee-ecceEEEEeee--cCCeEEEEEEEecC
Q psy8771         115 LEVMLDSPLNLSCVAVGS--PMPFVKWRKGQNIELT----------PDDKLP-VGRNVLTLDRV--TESENYTCIAASVL  179 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~--p~p~i~W~k~~~~~~~----------~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n~~  179 (904)
                      +....|++++|.|.....  ....|.|+|+ +..+.          ...+.. ..+++|.|.+|  +|+|.|+|.+.+..
T Consensus         5 V~G~~G~sV~L~~~~~~~~~~i~~I~W~~~-~~~i~~~~~~~~~~~~~~~~~~~~ngSL~I~nl~~~DsG~Y~c~v~~~~   83 (98)
T d1hnga1           5 VWGALGHGINLNIPNFQMTDDIDEVRWERG-STLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN   83 (98)
T ss_dssp             EEEETTSCEEECCTTCCCCTTEEEEEEEET-TEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred             EEEecCCCEEEECCCCCCccchheeeeecc-ccceeEEccCCccccCCCeEEECCCccEEEeCCCHHHCEEEEEEEEeCC
Confidence            677899999999964332  2357999998 43331          122333 26789999999  79999999999999


Q ss_pred             cce--EEEEEEEEE
Q psy8771         180 GVI--ETSTIVKVQ  191 (904)
Q Consensus       180 g~~--~~~~~l~v~  191 (904)
                      |..  +....|.|.
T Consensus        84 g~~~~~~~~~L~V~   97 (98)
T d1hnga1          84 GTRILNKALDLRIL   97 (98)
T ss_dssp             CCEEEEEEEEEEEE
T ss_pred             CCEEEEEEEEEEEE
Confidence            986  455555554

>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.95  E-value=3.8e-06  Score=68.03  Aligned_cols=75  Identities=13%  Similarity=0.139  Sum_probs=51.9

Q ss_pred             EEecCCCeEEEEEEccCCCCeEEEeeCCcccc------------------CCCCceee-cceEEEEeee--cCCeEEEEE
Q psy8771         116 EVMLDSPLNLSCVAVGSPMPFVKWRKGQNIEL------------------TPDDKLPV-GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       116 ~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~------------------~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      .+.+|+++.|.|.........+.|+|+.....                  ....|..+ .+++|.|.++  +|+|.|+|.
T Consensus        10 ~v~~G~~V~L~c~~~p~~~~~~~W~k~~~~~~~~~i~~y~~~~~~~~~~~~y~gR~~l~~ngSL~I~~v~~~D~G~Y~c~   89 (107)
T d1l6za1          10 QVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLD   89 (107)
T ss_dssp             SCCTTCCEEEEEESCCTTCSEEEEEESSCCSGGGEEEEECSTTCCEECCSSCCSSEEECTTSCEEECSCCGGGCEEEEEE
T ss_pred             cccCCCCEEEEecCCCCCceEEEEEeCcccCCceeeEEEEcCCCccccCCcceeEEEEcccccEEEcCCCchhCEEEEEE
Confidence            35699999999974433456899998532110                  01234443 6789999999  799999999


Q ss_pred             EEecCcc-eEEEEEEEE
Q psy8771         175 AASVLGV-IETSTIVKV  190 (904)
Q Consensus       175 a~n~~g~-~~~~~~l~v  190 (904)
                      +.+..+. .++...|.|
T Consensus        90 v~~~~~~~~~~~v~L~V  106 (107)
T d1l6za1          90 MTDENYRRTQATVRFHV  106 (107)
T ss_dssp             EEETTEEECCCCEEECC
T ss_pred             EEECCCCEEEEEEEEEE
Confidence            9887644 445566654

>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car), domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Coxsackie virus and adenovirus receptor (Car), domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=4.7e-05  Score=63.89  Aligned_cols=77  Identities=16%  Similarity=0.253  Sum_probs=55.0

Q ss_pred             eEEecCCCeEEEEEEccCCC----CeEEEeeCCcccc--------------------CCCCceee-------cceEEEEe
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM----PFVKWRKGQNIEL--------------------TPDDKLPV-------GRNVLTLD  163 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~----p~i~W~k~~~~~~--------------------~~~~~~~~-------~~~~l~i~  163 (904)
                      +.+.+|++++|.|.+.+.+.    ..|.|++......                    ....|...       ++.+|+|.
T Consensus        14 v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~   93 (124)
T d1eaja_          14 IEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVT   93 (124)
T ss_dssp             EEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEEC
T ss_pred             EEEECCCcEEEeEEEecccCCCCcEEEEEEEeCCCCcceeEEEEEEeCCccccccCcccccceEEEccCCCCCEEEEEEc
Confidence            88899999999999876544    2588997311100                    01123322       23479999


Q ss_pred             ee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         164 RV--TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       164 ~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      ++  +|+|.|.|.+.+..|..+....|.|.
T Consensus        94 ~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~  123 (124)
T d1eaja_          94 NLQLSDIGTYQCKVKKAPGVANKKIHLVVL  123 (124)
T ss_dssp             SCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             ccEEccCEEEEEEEEECCCeEEeEEEEEEE
Confidence            99  69999999999988888777777764

>d1nezg_ b.1.1.1 (G:) CD8 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD8
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.62  E-value=9.9e-05  Score=61.05  Aligned_cols=72  Identities=21%  Similarity=0.444  Sum_probs=52.4

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEee---CCccc----c----CCC------------Cceee-----
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK---GQNIE----L----TPD------------DKLPV-----  155 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k---~~~~~----~----~~~------------~~~~~-----  155 (904)
                      +|.+...|.. +.+.+|++++|.|.+.+.....+.|++   +++..    +    ...            .|+..     
T Consensus         1 a~~~~~~P~~-~~~~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~   79 (122)
T d1nezg_           1 APELRIFPKK-MDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTN   79 (122)
T ss_dssp             CCEEEEESSC-EEECTTCCEEEEEEEESCCSSCEEEEEEESSCSSCCCEEEEEECSSSCCEEECTTTTGGGTEEEEEETT
T ss_pred             CCceEEcCCE-EEECCCCCEEEEEEEcCccCCCEEEEEECCCCCcCceEEEEeeeccccceeeccCCCCCcEEEEECCCC
Confidence            5778888888 999999999999999998888899997   21210    0    000            12211     


Q ss_pred             cceEEEEeee--cCCeEEEEEEE
Q psy8771         156 GRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       156 ~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ....|+|.++  +|+|.|.|.+.
T Consensus        80 ~~~~L~I~~~~~~Dsg~YyCa~~  102 (122)
T d1nezg_          80 NKYVLTLNKFSKENEGYYFCSVI  102 (122)
T ss_dssp             TEEEEEESSCCGGGCEEEEEEEE
T ss_pred             CEeEEEEcccccCCCEEEEeeEe
Confidence            1236999999  79999999765

>d2cdea1 b.1.1.1 (A:2-115) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=97.48  E-value=0.00019  Score=58.55  Aligned_cols=71  Identities=18%  Similarity=0.373  Sum_probs=49.9

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------C------CCCceee------cceEEEEeee--c
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------T------PDDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------~------~~~~~~~------~~~~l~i~~l--~  166 (904)
                      .+.|.. +.+.+|+.++|.|...+.+...+.|++-. +...      .      ...++..      ...+|.|.++  +
T Consensus         4 ~Q~P~~-~~~~~G~~vtL~C~~~~~~~~~~~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~sL~i~~~~~~   82 (114)
T d2cdea1           4 EQSPQS-LIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLS   82 (114)
T ss_dssp             EEECSE-EEEETTCCCEEEEEECCSCCSEEEEEEECTTSCCCEEEEECSSCSCEEETTEEECBCSSSSEEEEEECSCCGG
T ss_pred             EeeCCE-EEEeCCCCEEEEEEEcCCCccCceEEEecCCCceEEeeeeeeeecccccCccceeecCcccccccEEcccChh
Confidence            344555 89999999999999998888889999831 1111      0      0122222      2457999998  7


Q ss_pred             CCeEEEEEEEecC
Q psy8771         167 ESENYTCIAASVL  179 (904)
Q Consensus       167 d~g~Y~c~a~n~~  179 (904)
                      |+|.|.|.+....
T Consensus        83 Dsg~Y~Ca~~~~~   95 (114)
T d2cdea1          83 DSASYICVVSDRG   95 (114)
T ss_dssp             GCSEEEEEEECSC
T ss_pred             hCcccceeeecCC
Confidence            9999999987643

>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD4 V-set domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=0.00016  Score=57.12  Aligned_cols=63  Identities=17%  Similarity=0.385  Sum_probs=45.6

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-------------CCCceee-------cceEEEEeee--cCCeEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-------------PDDKLPV-------GRNVLTLDRV--TESENYT  172 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-------------~~~~~~~-------~~~~l~i~~l--~d~g~Y~  172 (904)
                      +...+|++++|.|.........+.|++.....+.             ...|+..       ++.+|.|.+|  +|+|.|.
T Consensus         4 V~~~~G~svtL~C~~s~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~l~~~DsG~Y~   83 (97)
T d2nxyb1           4 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI   83 (97)
T ss_dssp             EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred             EEEEcCCcEEEEEEEecCCCceEEEEEeCCceeeeecceeeeecCceeccceEEEeccCCCCEEEEEECCCChHHCEEEE
Confidence            6778999999999998877788999985332110             1122221       2347999999  7999999


Q ss_pred             EEEEe
Q psy8771         173 CIAAS  177 (904)
Q Consensus       173 c~a~n  177 (904)
                      |.+.+
T Consensus        84 C~v~~   88 (97)
T d2nxyb1          84 CEVED   88 (97)
T ss_dssp             EEETT
T ss_pred             EEEec
Confidence            99865

>d1a0ql1 b.1.1.1 (L:2-108) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=97.45  E-value=0.00026  Score=56.59  Aligned_cols=70  Identities=13%  Similarity=0.357  Sum_probs=48.7

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC--cc-cc--C--------CCCceee----cceEEEEeee--cC
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ--NI-EL--T--------PDDKLPV----GRNVLTLDRV--TE  167 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~--~~-~~--~--------~~~~~~~----~~~~l~i~~l--~d  167 (904)
                      +++.|.. +.+.+|+.++|.|.........+.|++-.  .. .+  .        ...++..    ...+|.|.++  +|
T Consensus         3 ltQsP~~-l~~~~G~svtl~C~~s~~~~~~~~WYrq~~g~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~I~~~~~~D   81 (106)
T d1a0ql1           3 LTQSPSS-LSASLGGKVTITCKASQDIKKYIGWYQHKPGKQPRLLIHYTSTLLPGIPSRFRGSGSGRDYSFSISNLEPED   81 (106)
T ss_dssp             EEEECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGG
T ss_pred             eECcCCE-EEECCCCCEEEEEEcCCCCCCCeEEEECCCCCcEEEEEEccccccCCCCcceEeecCCCEeeeEehhhcccC
Confidence            3444555 88999999999999887777779999831  11 11  0        1123332    2347999999  79


Q ss_pred             CeEEEEEEEe
Q psy8771         168 SENYTCIAAS  177 (904)
Q Consensus       168 ~g~Y~c~a~n  177 (904)
                      ++.|.|.+..
T Consensus        82 sA~YyCa~~~   91 (106)
T d1a0ql1          82 IATYYCLQYY   91 (106)
T ss_dssp             CSEEEEEECS
T ss_pred             CEeEEEEEeC
Confidence            9999998754

>d1lp9e1 b.1.1.1 (E:0-117) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=97.42  E-value=0.00045  Score=56.32  Aligned_cols=71  Identities=17%  Similarity=0.249  Sum_probs=48.8

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cc--cc----------CCCCceee------cceEEEEeee--c
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NI--EL----------TPDDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~--~~----------~~~~~~~~------~~~~l~i~~l--~  166 (904)
                      .+.|.. +.+.+|+.++|.|.........+.|+|.. +.  .+          ....++..      ....|.|.++  +
T Consensus         5 ~Q~~~~-v~v~~G~~vtL~C~~~~~~~~~i~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~   83 (115)
T d1lp9e1           5 TQTEGL-VTLTEGLPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLS   83 (115)
T ss_dssp             EECCSE-EEEETTSCEEECEEEECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGG
T ss_pred             EcCCCe-EEECCCCCEEEEEEEeCCCcCCeeEEEeCCCCceeeeeeeeeccCCcceeeeeeeccCCCCeEEeeccccccc
Confidence            344444 88999999999999998878889999831 11  11          01122222      2346999999  6


Q ss_pred             CCeEEEEEEEecC
Q psy8771         167 ESENYTCIAASVL  179 (904)
Q Consensus       167 d~g~Y~c~a~n~~  179 (904)
                      |+|.|.|.+....
T Consensus        84 Dsg~YyCa~~~~~   96 (115)
T d1lp9e1          84 DSALYYCALFLAS   96 (115)
T ss_dssp             GCEEEEEEEEECS
T ss_pred             cCccceEEEEcCC
Confidence            9999999876543

>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ig alpha Fc receptor, FCARI (CD89)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00022  Score=56.44  Aligned_cols=77  Identities=13%  Similarity=0.130  Sum_probs=51.8

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCce----eecceEEEEeee--cCCeEEEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKL----PVGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~----~~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ..|.|...|.  ..|..|++|+|.|... .+...+.|+|++........+.    ......+.|.++  +|+|.|+|...
T Consensus         6 pkPsLsa~P~--~~V~~G~~VTL~C~~~-~~~~~f~l~k~g~~~~~~~~~~~~~~~~~~a~F~l~~vt~~~~G~Y~C~y~   82 (99)
T d1ucta1           6 PMPFISAKSS--PVIPLDGSVKIQCQAI-REAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR   82 (99)
T ss_dssp             CCCCEEESSC--SEEETTCCEEEEECCC-TTCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred             CCCEEEecCC--CceeCCCeEEEEEcCC-CCCcEEEEEECCCcCceeccccccCCCCceEEEEecCCCHHHCceEEEEEE
Confidence            4577877776  4578999999999865 3456789999832211111111    113446899999  69999999988


Q ss_pred             ecCcce
Q psy8771         177 SVLGVI  182 (904)
Q Consensus       177 n~~g~~  182 (904)
                      +.....
T Consensus        83 ~~~~~S   88 (99)
T d1ucta1          83 IGHYRF   88 (99)
T ss_dssp             ETTTEE
T ss_pred             CCCccc
Confidence            766533

>d1xeda_ b.1.1.1 (A:) Polymeric-immunoglobulin receptor, PIGR {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Polymeric-immunoglobulin receptor, PIGR
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00033  Score=57.50  Aligned_cols=81  Identities=11%  Similarity=0.196  Sum_probs=52.4

Q ss_pred             CCCCceEEecCCCeEEEEEEccCC---CCeEEEeeCCcc-cc------------CCCCceee------cceEEEEeee--
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSP---MPFVKWRKGQNI-EL------------TPDDKLPV------GRNVLTLDRV--  165 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p---~p~i~W~k~~~~-~~------------~~~~~~~~------~~~~l~i~~l--  165 (904)
                      .|.. +.+.+|++++|.|...+..   ...+.|+|.... .+            ....|+.+      ...+|.|.+|  
T Consensus         5 ~P~~-V~~~~G~svtL~C~y~~~~~~~~~~~~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~l~~   83 (116)
T d1xeda_           5 GPEE-VNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQ   83 (116)
T ss_dssp             CCSE-EEEETTCCEEEEEECCCCHHHHHSCEEEEEC-----CEEEEESSSCBCTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred             CCCE-EEEcCCCCEEEEEEECCCCCccceeEEEEEcCCCCCcEEEEECcccccceecCCccEeeeCCCCEEEEEEhhhCc
Confidence            4555 9999999999999976442   245789874211 10            11123322      2358999999  


Q ss_pred             cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771         166 TESENYTCIAASVLGVIETSTIVKVQ  191 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~  191 (904)
                      +|+|.|.|.+............|.|.
T Consensus        84 ~DsG~Y~C~v~~~~~~~~~~v~L~V~  109 (116)
T d1xeda_          84 DDSGRYKCGLGINSRGLSFDVSLEVL  109 (116)
T ss_dssp             GGCEEEEEEESCGGGCCEEEEEEEEE
T ss_pred             CCCEEEEEEEEcCCCCceEeEEEEEE
Confidence            79999999886544445556667666

>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Myelin membrane adhesion molecule P0
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.30  E-value=0.00031  Score=58.10  Aligned_cols=82  Identities=12%  Similarity=0.200  Sum_probs=51.1

Q ss_pred             cCCCCceEEecCCCeEEEEEEccC----CCCeEEEeeCC--cc---cc--------------CCCCceee------cceE
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGS----PMPFVKWRKGQ--NI---EL--------------TPDDKLPV------GRNV  159 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~----p~p~i~W~k~~--~~---~~--------------~~~~~~~~------~~~~  159 (904)
                      ..|.+ +.+..|++++|.|.....    ....|.|++..  +.   .+              ....|+..      ++.+
T Consensus         4 ~~p~~-v~a~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s   82 (119)
T d1neua_           4 YTDRE-VYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGS   82 (119)
T ss_dssp             ECCSE-EEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCC
T ss_pred             cCCCe-EEEeeCCCEEEEEEEEecCCCCccEEEEEEEecccCCceeEEEEEeecccccccCccceeEEEEEEECCCCEEE
Confidence            44556 899999999999987532    23478998721  11   00              01134332      2357


Q ss_pred             EEEeee--cCCeEEEEEEEecCcc--eEEEEEEEEE
Q psy8771         160 LTLDRV--TESENYTCIAASVLGV--IETSTIVKVQ  191 (904)
Q Consensus       160 l~i~~l--~d~g~Y~c~a~n~~g~--~~~~~~l~v~  191 (904)
                      |.|.++  +|+|.|.|.+.+..+.  ......|.|.
T Consensus        83 L~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~v~L~V~  118 (119)
T d1neua_          83 IVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVF  118 (119)
T ss_dssp             EEECSCCGGGCEEEEEEEEC----CCEEEEEEEEEE
T ss_pred             EEECCCChHHCEEEEEEEEECCCcCceEEEEEEEEE
Confidence            999999  6999999999875433  3444555553

>d1c5cl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=97.30  E-value=0.00043  Score=55.16  Aligned_cols=69  Identities=14%  Similarity=0.381  Sum_probs=48.2

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cCC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      ++.|.. +.+.+|++++|.|.........+.|++.. |..+            ....++..    ++..|.|.+|  +|+
T Consensus         5 tQ~P~s-~~~~~G~svtl~C~~s~~~~~~~~Wyrq~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Ds   83 (107)
T d1c5cl1           5 TQSPSS-LSASLGERVSLTCRTSQEISGYLSWLQQKPDGTIKRLIYDATKLDSGAPKRFSGSRSGSDYSLTISSLESEDF   83 (107)
T ss_dssp             EEECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             EccCCE-EEECCCCCEEEEEEeCCCCCCCEEEEEcCCCCcceeEEeccccccCCCCCceEecccCCEEEEEEhhhcccCC
Confidence            344544 88999999999999988777789999821 2111            01122221    3458999999  799


Q ss_pred             eEEEEEEEe
Q psy8771         169 ENYTCIAAS  177 (904)
Q Consensus       169 g~Y~c~a~n  177 (904)
                      |.|.|.+.+
T Consensus        84 a~YyCa~~~   92 (107)
T d1c5cl1          84 ADYYCLQYA   92 (107)
T ss_dssp             SEEEEEECS
T ss_pred             eEEEEecCc
Confidence            999997654

>d1i8ka_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=97.29  E-value=0.00034  Score=55.86  Aligned_cols=69  Identities=13%  Similarity=0.309  Sum_probs=48.3

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cCC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      +..|.. +.+.+|++++|.|...+.....+.|++.. |...            ....|+..    +...|.|.++  +|+
T Consensus         5 tQsP~s-lsv~~G~svtl~C~~s~~~~~~~~WYrQ~~g~~~~~~~~~~~~~~~~~~~rfs~~~~~~~~~L~I~~~~~~Ds   83 (106)
T d1i8ka_           5 TQSPAS-LSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDV   83 (106)
T ss_dssp             EEECSE-EECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             EeeCCE-EEECCCCCEEEEEEeCCCCCccEEEEeCCCCCceEEEEeccCccccCCCcceeEeCCCCeeeecccCCccccC
Confidence            344555 88999999999999887777779999731 2111            11234432    3457999999  799


Q ss_pred             eEEEEEEEe
Q psy8771         169 ENYTCIAAS  177 (904)
Q Consensus       169 g~Y~c~a~n  177 (904)
                      |.|.|.+.+
T Consensus        84 a~YyCa~~~   92 (106)
T d1i8ka_          84 GDYYCLQSF   92 (106)
T ss_dssp             EEEEEEECS
T ss_pred             EEEeEecCc
Confidence            999997643

>d1ospl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=97.24  E-value=0.00059  Score=54.51  Aligned_cols=69  Identities=13%  Similarity=0.236  Sum_probs=48.8

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cCC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      ++.|.. +++.+|++++|.|...+.....+.|++-. +..+            ....|+..    ....|.|.++  +|+
T Consensus         5 tQsP~~-ltv~~G~svtl~C~~s~~~~~~~~WYrQ~~g~~~~~i~~~~~~~~~~~~~rfs~~~~~~~~~L~I~~~~~~Ds   83 (107)
T d1ospl1           5 SQSSSS-FSVSLGDRVTITCKASEDIYSRLAWYQQKPGNAPRLLISGATSLETWVPSRFSGSDSGKDYTLSITSLQTEDV   83 (107)
T ss_dssp             ECCCSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEECSSSSEEEEESSCCGGGC
T ss_pred             EeeCCE-EEECCCCCEEEEEecCCCcccccEEEEcCCCccceeEEeeccccCCccccccceecCCCeEEeEEcccccccC
Confidence            344555 89999999999999988777789999831 2111            11233432    3458999999  699


Q ss_pred             eEEEEEEEe
Q psy8771         169 ENYTCIAAS  177 (904)
Q Consensus       169 g~Y~c~a~n  177 (904)
                      +.|.|.+..
T Consensus        84 a~YyCa~~~   92 (107)
T d1ospl1          84 ATYFCQQYW   92 (107)
T ss_dssp             SEEEEEECS
T ss_pred             CcEEEeecc
Confidence            999997653

>d2bnqd1 b.1.1.1 (D:2-114) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=97.24  E-value=0.00043  Score=56.25  Aligned_cols=73  Identities=23%  Similarity=0.382  Sum_probs=50.5

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc--c----CCC------Cceee------cceEEEEeee--
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE--L----TPD------DKLPV------GRNVLTLDRV--  165 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~--~----~~~------~~~~~------~~~~l~i~~l--  165 (904)
                      +...|.. +.+.+|+.++|.|...+.....+.|+|-. +..  +    ..+      .++..      ....|.|.++  
T Consensus         3 V~Q~P~~-v~v~~G~sv~L~C~~s~~~~~~~~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~   81 (113)
T d2bnqd1           3 VTQIPAA-LSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQP   81 (113)
T ss_dssp             EECSSSE-EEEETTCCEEEEEEESCCCEEEEEEEEECTTSCEEEEEEEETTCCEEEETTEEEEEETTTTEEEEEESSCCG
T ss_pred             cEeeCCE-EEEcCCCCEEEEEEEecCcccCCeEEEeccccccceeeeeccceecccccceeeeeccCCCEEEeeeecCCC
Confidence            4455666 89999999999999998877789999821 211  1    011      12211      2348999999  


Q ss_pred             cCCeEEEEEEEecCc
Q psy8771         166 TESENYTCIAASVLG  180 (904)
Q Consensus       166 ~d~g~Y~c~a~n~~g  180 (904)
                      +|+|.|.|.+....+
T Consensus        82 ~Dsg~YyCa~~~~~~   96 (113)
T d2bnqd1          82 GDSATYLCAVRPTSG   96 (113)
T ss_dssp             GGCEEEEEEEEESSS
T ss_pred             CCCcEEeEeEecCCC
Confidence            799999998875443

>d1kcvl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=97.24  E-value=0.00084  Score=53.75  Aligned_cols=68  Identities=19%  Similarity=0.399  Sum_probs=48.0

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---c-------C--CCCceee----cceEEEEeee--cCC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---L-------T--PDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---~-------~--~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      ++.|.. +.+.+|++++|.|...+.....+.|++-. +..   +       .  ...++..    ....|.|.+|  +|+
T Consensus         5 tQsP~~-l~v~~G~svtl~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~DS   83 (107)
T d1kcvl1           5 TQSPKS-MGMSVGEAVTLNCKASENVGTYVSWYQQKPGQSPVLLIYGASNRYTGVPDRFTGSGSATDFTLTISSVQADDD   83 (107)
T ss_dssp             EESCSE-EEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             ECcCCE-EeECCCCCEEEEEEecCCcCCceEEEEcccCCCCEEEEEecccccCCccceEEeeccCCeeecEEHhheecCC
Confidence            344555 88999999999999998777789999731 111   1       0  1223332    3457999999  799


Q ss_pred             eEEEEEEE
Q psy8771         169 ENYTCIAA  176 (904)
Q Consensus       169 g~Y~c~a~  176 (904)
                      +.|.|.+.
T Consensus        84 a~YyCa~~   91 (107)
T d1kcvl1          84 ADYYCGQS   91 (107)
T ss_dssp             EEEEEEEC
T ss_pred             ceEEEEec
Confidence            99999764

>d1dr9a2 b.1.1.3 (A:106-200) CD80, second domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: CD80, second domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00099  Score=51.78  Aligned_cols=62  Identities=15%  Similarity=0.269  Sum_probs=41.3

Q ss_pred             ecCCCeEEEEEEcc-CCCCeEEEeeCCccccCCCCcee---ecceEEEEeee-----cCCeEEEEEEEecCc
Q psy8771         118 MLDSPLNLSCVAVG-SPMPFVKWRKGQNIELTPDDKLP---VGRNVLTLDRV-----TESENYTCIAASVLG  180 (904)
Q Consensus       118 ~~g~~~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~~~~---~~~~~l~i~~l-----~d~g~Y~c~a~n~~g  180 (904)
                      ..++.++|.|.+.| .|.+.|+|.++ +..+.......   ..++.+.+...     .++..|+|.+....-
T Consensus        14 ~s~~~~~L~C~~~g~~P~~~V~W~~n-~~~~~~~~~~~~~~~~~g~y~v~S~L~v~~~~~~~~tC~V~h~~l   84 (95)
T d1dr9a2          14 PTSNIRRIICSTSGGFPEPHLSWLEN-GEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHL   84 (95)
T ss_dssp             SSTTEEEEEEEEEEESSCEEEEEEES-SCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTC
T ss_pred             CCCCEEEEEEEECcccCCCEEEEecC-CcEecccceeeEecCCCccEEEEEEEEccCCccceEEEEEEecCC
Confidence            35677899999998 79999999999 65554432221   12344443322     467889998876443

>d1sq2n_ b.1.1.1 (N:) Novel antigen receptor (against lysozyme) {Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Novel antigen receptor (against lysozyme)
species: Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]

Probab=97.22  E-value=0.00051  Score=55.35  Aligned_cols=70  Identities=11%  Similarity=0.278  Sum_probs=48.3

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeC---Cc--cccCCCCceee------cceEEEEeee--cCCeEEE
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKG---QN--IELTPDDKLPV------GRNVLTLDRV--TESENYT  172 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~---~~--~~~~~~~~~~~------~~~~l~i~~l--~d~g~Y~  172 (904)
                      .+.|.. +++.+|+.++|.|...+..  ...|.|++.   .+  ..+....|+..      ...+|+|.+|  +|+|.|.
T Consensus         3 ~Q~P~s-~t~~~G~svtl~C~~s~~s~~~~~i~WYrq~~g~~~~~~~~~~gr~~~~~~~~~~~~~L~I~~l~~~Dsa~Yy   81 (112)
T d1sq2n_           3 DQTPRS-VTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYR   81 (112)
T ss_dssp             EEECSE-EEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred             EecCCE-EEEcCCCCEEEEEEECCCcccCCceEEEEeeccceeeeeeccCCcEeeEEecCCceeeeEecCCcCccCEEEe
Confidence            344555 8899999999999987643  467999982   11  12233344432      2347999999  7999999


Q ss_pred             EEEEec
Q psy8771         173 CIAASV  178 (904)
Q Consensus       173 c~a~n~  178 (904)
                      |.+...
T Consensus        82 CA~~~~   87 (112)
T d1sq2n_          82 CGLGVA   87 (112)
T ss_dssp             EEECBT
T ss_pred             EEEecC
Confidence            987543

>d1tvda_ b.1.1.1 (A:) T-cell antigen receptor {Human (Homo sapiens), delta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), delta-chain [TaxId: 9606]

Probab=97.21  E-value=0.00099  Score=54.26  Aligned_cols=72  Identities=18%  Similarity=0.267  Sum_probs=48.7

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEee---CCccc-cC------------CCCceee----c--ceEEEEe
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRK---GQNIE-LT------------PDDKLPV----G--RNVLTLD  163 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k---~~~~~-~~------------~~~~~~~----~--~~~l~i~  163 (904)
                      ++..|.. +.+.+|++++|.|...+. ....+.|++   +++.. +.            ...|+..    .  ..+|.|.
T Consensus         3 VtQ~p~~-~~~~~G~~vtL~C~~~~~~~~~~i~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~rf~~~~~~~~~~~~L~I~   81 (116)
T d1tvda_           3 VTQSSPD-QTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVIS   81 (116)
T ss_dssp             EECCSCC-EEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEES
T ss_pred             EEccCCC-EEEcCCCCEEEEEEEcCCccCCcEEEEEeCCCCceEEeeecccccccccCccceEEEEEecCceeEEeeeec
Confidence            4555666 999999999999998755 456799997   21111 10            1134432    1  2378999


Q ss_pred             ee--cCCeEEEEEEEecC
Q psy8771         164 RV--TESENYTCIAASVL  179 (904)
Q Consensus       164 ~l--~d~g~Y~c~a~n~~  179 (904)
                      ++  +|+|.|.|.+....
T Consensus        82 ~~~~~Dsg~YyCa~~~~~   99 (116)
T d1tvda_          82 PVRTEDSATYYCAFTLPP   99 (116)
T ss_dssp             SCCGGGCEEEEEEEECTT
T ss_pred             CccccccccceeeEecCC
Confidence            99  79999999876544

>d1j1pl_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=97.20  E-value=0.00065  Score=54.37  Aligned_cols=68  Identities=21%  Similarity=0.293  Sum_probs=47.8

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cCCe
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TESE  169 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d~g  169 (904)
                      +.|.. +.+.+|++++|.|.........+.|++.. |..+            ....|+..    .+..|.|.++  +|+|
T Consensus         6 Q~p~~-l~v~~G~~vtL~C~~~~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~fs~~~~~~~~~L~I~~~~~~Dsa   84 (107)
T d1j1pl_           6 QSPAT-LSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFG   84 (107)
T ss_dssp             EECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred             CcCCe-EEECCCCCEEEEEEecCCCCcceEEEEeCCCCccEEeeecccCCCceeCCcceecccCCEEEEEEcccCcCCCE
Confidence            44444 88999999999999887777789999832 2111            01123332    3458999999  7999


Q ss_pred             EEEEEEEe
Q psy8771         170 NYTCIAAS  177 (904)
Q Consensus       170 ~Y~c~a~n  177 (904)
                      .|.|.+.+
T Consensus        85 ~YyCa~~~   92 (107)
T d1j1pl_          85 MYFCQQAN   92 (107)
T ss_dssp             EEEEEECS
T ss_pred             EEEEEcCC
Confidence            99997643

>d1tjgl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Engineered (including hybrid species)

Probab=97.19  E-value=0.00081  Score=53.71  Aligned_cols=70  Identities=14%  Similarity=0.329  Sum_probs=48.6

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---c---------CCCCceee----cceEEEEeee--cC
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---L---------TPDDKLPV----GRNVLTLDRV--TE  167 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---~---------~~~~~~~~----~~~~l~i~~l--~d  167 (904)
                      +++.|.. +++.+|+.++|.|.........+.|++-. |..   |         ....++..    ....|.|.+|  +|
T Consensus         4 ~tQ~P~s-l~~~~G~svtL~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~D   82 (107)
T d1tjgl1           4 LTQSPSS-LSASVGDRITITCRASQGVTSALAWYRQKPGSPPQLLIYDASSLESGVPSRFSGSGSGTEFTLTISTLRPED   82 (107)
T ss_dssp             EEEECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred             EEeeCCE-EEECCCCCEEEEEEECCCCCccEEEEeccCCccceEEEeecccccCCCCcceEEeccCCEEEEEeccceeCc
Confidence            4455555 89999999999999987667789999831 211   1         01123332    2447999999  79


Q ss_pred             CeEEEEEEEe
Q psy8771         168 SENYTCIAAS  177 (904)
Q Consensus       168 ~g~Y~c~a~n  177 (904)
                      ++.|.|.+..
T Consensus        83 sA~YyCa~~~   92 (107)
T d1tjgl1          83 FATYYCQQLH   92 (107)
T ss_dssp             CSEEEEEECS
T ss_pred             CceEEEEECc
Confidence            9999996543

>d1mexl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=97.19  E-value=0.00087  Score=53.47  Aligned_cols=69  Identities=16%  Similarity=0.257  Sum_probs=48.0

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cC
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TE  167 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d  167 (904)
                      +++.|.. +.+.+|++++|.|.....-...+.|++-. |..+            ....|+..    .+..|.|.++  +|
T Consensus         4 ltQ~p~~-l~~~~G~svtl~C~~s~~~~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~rfs~~~~~~~~~L~I~~~~~~D   82 (107)
T d1mexl1           4 MTQSQKF-MSTSLGNRVSVTCKASQNVGTNVAWFQQKPGQSPKTLIYSASYRYSGVPDRFTGSGSGTDFTLTINNVQSED   82 (107)
T ss_dssp             EECCCSE-EEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred             EEcCCCe-EEECCCCCEEEEEEeCCCCCCceEEEeccCCcccEEEEEeccccccccCCCeeecCCCCeeeeeechhheec
Confidence            3445555 88999999999999887766679999831 2111            01233432    3457999999  79


Q ss_pred             CeEEEEEEE
Q psy8771         168 SENYTCIAA  176 (904)
Q Consensus       168 ~g~Y~c~a~  176 (904)
                      ++.|.|.+.
T Consensus        83 sA~YyCa~~   91 (107)
T d1mexl1          83 LAEYFCQQY   91 (107)
T ss_dssp             CSEEEEEEC
T ss_pred             ceeEEEeEC
Confidence            999999764

>d1ucta2 b.1.1.4 (A:101-196) Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ig alpha Fc receptor, FCARI (CD89)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00086  Score=52.11  Aligned_cols=72  Identities=19%  Similarity=0.201  Sum_probs=50.4

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      -.|.+...|.  -.+..|++++|.|.......-.+.|+|+ |...............+.|.++  +|+|.|+|.-..
T Consensus         4 PkP~Lsa~P~--~~V~~G~~VTL~C~~~~~~~~~f~L~k~-g~~~~~~~~~~~~~a~F~l~~v~~~~~G~Y~C~y~~   77 (96)
T d1ucta2           4 GKPFLSADRG--LVLMPGENISLTCSSAHIPFDRFSLAKE-GELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWY   77 (96)
T ss_dssp             CCCEEEESSC--SEECTTCCCEEEEECSSSCCSEEEEEET-TCSSCCSEEECSSSEEEECCSCCGGGCEEEEEEEEC
T ss_pred             CCCEEEEeCC--CccCCCCeEEEEEeCCCCCceEEEEEEC-CcccceEEcCCCcccEEEEeccccccCcEEEEEEEc
Confidence            3577877776  5789999999999864444457889998 4332221111123467889998  699999998764

>d1vesa_ b.1.1.1 (A:) Novel antigen receptor 12Y-2 {Spotted wobbegong (Orectolobus maculatus) [TaxId: 168098]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Novel antigen receptor 12Y-2
species: Spotted wobbegong (Orectolobus maculatus) [TaxId: 168098]

Probab=97.13  E-value=0.00083  Score=54.36  Aligned_cols=70  Identities=14%  Similarity=0.274  Sum_probs=48.3

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeCC-cc----ccCCCCceee------cceEEEEeee--cCCeEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NI----ELTPDDKLPV------GRNVLTLDRV--TESENY  171 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~----~~~~~~~~~~------~~~~l~i~~l--~d~g~Y  171 (904)
                      +.+.|.. +.+.+|++++|.|...+..  ...+.|++.. +.    .+....++..      ....|.|.+|  +|+|.|
T Consensus         3 V~Q~P~s-~~~~~G~svtL~C~~s~~~~~~~~~~Wyrq~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Dsa~Y   81 (113)
T d1vesa_           3 VDQTPRT-ATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTY   81 (113)
T ss_dssp             EEEECSE-EEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred             eEeeCCE-EEEcCCCCEEEEEEECCCcccCCccceeeeeccccceeeeeecccccceeECCCCceeeeecccccCCcceE
Confidence            3445555 8899999999999998653  3568999721 11    1223344432      1247999999  799999


Q ss_pred             EEEEEe
Q psy8771         172 TCIAAS  177 (904)
Q Consensus       172 ~c~a~n  177 (904)
                      .|.+..
T Consensus        82 yCa~~~   87 (113)
T d1vesa_          82 KCQAFY   87 (113)
T ss_dssp             EEEEEE
T ss_pred             eeeeec
Confidence            998754

>d1i9ea_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=97.11  E-value=0.00084  Score=54.66  Aligned_cols=70  Identities=21%  Similarity=0.307  Sum_probs=47.7

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---c----CCC--------Cceee----cceEEEEeee-
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---L----TPD--------DKLPV----GRNVLTLDRV-  165 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---~----~~~--------~~~~~----~~~~l~i~~l-  165 (904)
                      +..+|.. +.+.+|++++|.|...+.....+.|++-. +..   +    ...        .+...    .+..|.|.++ 
T Consensus         3 V~Q~~~~-v~v~~G~svtl~C~~~~~~~~~~~Wyrq~pg~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~   81 (115)
T d1i9ea_           3 VTQPDAR-VTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGLQLLLKYYSGDPVVQGVNGFEAEFSKSNSSFHLRKASVH   81 (115)
T ss_dssp             EECCCSE-EEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECGGGCEEECBTTTTBCCEEESSCC
T ss_pred             EEcCCCe-EEECCCCCEEEEEEEcCCCCCCEEEEEECCCCceeeeeeeccceeccccCcceeEEEeCcCCEEEEeccccc
Confidence            3444555 99999999999999987777788999721 211   1    011        11111    2347999999 


Q ss_pred             -cCCeEEEEEEEe
Q psy8771         166 -TESENYTCIAAS  177 (904)
Q Consensus       166 -~d~g~Y~c~a~n  177 (904)
                       +|+|.|.|.+..
T Consensus        82 ~~Dsg~YyCa~~~   94 (115)
T d1i9ea_          82 WSDSAVYFCAVSG   94 (115)
T ss_dssp             GGGCEEEEEEEEE
T ss_pred             ccccceecccccC
Confidence             799999998763

>d1olla1 b.1.1.4 (A:1-95) Ligand binding domain of NK receptor NKp46 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of NK receptor NKp46
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00049  Score=53.62  Aligned_cols=75  Identities=11%  Similarity=0.072  Sum_probs=49.8

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCce--eecceEEEEeee--cCCeEEEEEEEec
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKL--PVGRNVLTLDRV--TESENYTCIAASV  178 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~--~~~~~~l~i~~l--~d~g~Y~c~a~n~  178 (904)
                      -.|.|...|.  -.+..|++|+|.|.... ....+.|+|++........+.  ......+.|.++  .|+|.|+|...+.
T Consensus         3 PKPsLsa~P~--~~V~~G~~VTL~C~~~~-~~~~f~L~k~g~~~~~~~~~~~~~~~~a~F~i~~v~~~~~G~Y~C~y~~~   79 (95)
T d1olla1           3 PKPFIWAEPH--FMVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVG   79 (95)
T ss_dssp             CCCEEEEESC--SEEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred             CCCEEEeeCC--CcccCCCcEEEEEecCC-CccEEEEEECCCCcceeEEccCCCccEEEEEEeeeecCCCceEEEEeCCC
Confidence            3577877786  45679999999998643 345678888833221111111  113357999999  6999999997764


Q ss_pred             Cc
Q psy8771         179 LG  180 (904)
Q Consensus       179 ~g  180 (904)
                      .+
T Consensus        80 ~~   81 (95)
T d1olla1          80 EL   81 (95)
T ss_dssp             TE
T ss_pred             CC
Confidence            43

>d3bp5a1 b.1.1.1 (A:1-114) Programmed cell death protein 1, PD1, extracellular domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Programmed cell death protein 1, PD1, extracellular domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.09  E-value=0.0011  Score=53.84  Aligned_cols=70  Identities=17%  Similarity=0.266  Sum_probs=47.9

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeC--Cccc--c----------CCCCceee------cceEEEEeee-
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKG--QNIE--L----------TPDDKLPV------GRNVLTLDRV-  165 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~--~~~~--~----------~~~~~~~~------~~~~l~i~~l-  165 (904)
                      +..|.. +.+.+|+.++|.|.+.+.. ...+.|++-  +..+  +          ....|+.+      ....|.|.++ 
T Consensus         3 tqsP~~-l~v~~G~~vtl~C~~~~~~~~~~~~Wyrq~~g~~p~~l~~~~~~~~~~~~~~rf~~~~~~~~~~~~L~I~~~~   81 (114)
T d3bp5a1           3 TFYPAW-LTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTR   81 (114)
T ss_dssp             EEESSE-EEEETTCCEEEEEEESCCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCC
T ss_pred             eECCCe-EEECCCCCEEEEEEECCCCCcceEEEEEECCCCCCeeeEEeeeccccccccCcceEEEeCCCCEEEEEECccC
Confidence            444556 9999999999999997654 456899982  1111  1          12234442      1246999999 


Q ss_pred             -cCCeEEEEEEEec
Q psy8771         166 -TESENYTCIAASV  178 (904)
Q Consensus       166 -~d~g~Y~c~a~n~  178 (904)
                       +|+|.|.|.+...
T Consensus        82 ~~Dsg~YyCa~~~~   95 (114)
T d3bp5a1          82 RNDSGIYLCGAISL   95 (114)
T ss_dssp             GGGCEEEEEEEECS
T ss_pred             cCCCeEEEEEEEeC
Confidence             6999999988654

>d1op3k1 b.1.1.1 (K:2-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Engineered (including hybrid species)

Probab=97.05  E-value=0.0013  Score=52.41  Aligned_cols=69  Identities=16%  Similarity=0.355  Sum_probs=48.4

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cc--c-c---------CCCCceee----cceEEEEeee--cCC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NI--E-L---------TPDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~--~-~---------~~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      ++.|.. +.+.+|+.++|.|...+.-...+.|++-. +.  . +         ....|+..    ....|.|.++  +|+
T Consensus         4 tQ~P~s-l~~~~G~svtL~C~~~~~~~~~~~WYrq~~g~~p~~l~~~~~~~~~~~~~~f~~~~~~~~~~L~I~~~~~~Ds   82 (106)
T d1op3k1           4 TQSPST-LSASVGDTITITCRASQSIETWLAWYQQKPGKAPKLLIYKASTLKTGVPSRFSGSGSGTEFTLTISGLQFDDF   82 (106)
T ss_dssp             EEECSE-EEECTTCEEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGC
T ss_pred             eCcCCe-EEECCCCCEEEEEEeCCCCCCcEEEEecCCCCCCEEEEEccccCCCCcCCceeeeccCCEEEEEEccccccCC
Confidence            344555 89999999999999987777779999831 11  1 1         01123332    2347999999  799


Q ss_pred             eEEEEEEEe
Q psy8771         169 ENYTCIAAS  177 (904)
Q Consensus       169 g~Y~c~a~n  177 (904)
                      +.|.|.+..
T Consensus        83 a~YyCa~~~   91 (106)
T d1op3k1          83 ATYHCQHYA   91 (106)
T ss_dssp             SEEEEEEEC
T ss_pred             CcEeeeeCC
Confidence            999997653

>d1lk3l1 b.1.1.1 (L:1-106) Immunoglobulin light chain kappa variable domain, VL-kappa {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.03  E-value=0.0013  Score=52.49  Aligned_cols=62  Identities=24%  Similarity=0.360  Sum_probs=44.8

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCC-c-cc--cC---------CCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-N-IE--LT---------PDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~-~~--~~---------~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      +.+.+|+.++|.|...+.....+.|++-. + .+  +.         ...++..    .+..|.|.+|  +|++.|.|.+
T Consensus        10 ~~~~~G~svtL~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~f~~~~~~~~~~L~I~~~~~~Dsa~YyCa~   89 (106)
T d1lk3l1          10 LTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQ   89 (106)
T ss_dssp             EEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred             EEECCCCCEEEEEEeCCCCCccEEEEecCCCCCcEEEEEecccccCCcCCceeeecCCCEEEeEECCcChhhCCCccccc
Confidence            88999999999999998777789999731 1 11  10         1223332    2358999999  7999999965


Q ss_pred             E
Q psy8771         176 A  176 (904)
Q Consensus       176 ~  176 (904)
                      .
T Consensus        90 ~   90 (106)
T d1lk3l1          90 S   90 (106)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1muja1 b.1.1.2 (A:84-183) Class II MHC alpha chain, C-terminal domain {Mouse (Mus musculus), I-A group [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Class II MHC alpha chain, C-terminal domain
species: Mouse (Mus musculus), I-A group [TaxId: 10090]

Probab=97.02  E-value=0.00085  Score=52.51  Aligned_cols=72  Identities=17%  Similarity=0.297  Sum_probs=46.7

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCCc----eeecceEEEEeee-----cCCeEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDK----LPVGRNVLTLDRV-----TESENY  171 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~l-----~d~g~Y  171 (904)
                      .||++...|..  .+..|+.++|.|.+.|. |. ..|+|.++ |..+..+..    ....++++.+...     +++..|
T Consensus         2 ~pP~V~v~p~~--~~~~~~~~tL~C~v~gFyP~~i~v~W~~n-g~~v~~~~~~t~~~~~~dgtf~~~s~l~v~~~~~~~y   78 (100)
T d1muja1           2 EAPQATVFPKS--PVLLGQPNTLICFVDNIFPPVINITWLRN-SKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIY   78 (100)
T ss_dssp             CCCEEEEEESS--CCCTTSCEEEEEEEEEECSSCCEEEEEES-SSBCCSSEEECCCEECTTSCEEEEEEEEECCCTTCCE
T ss_pred             CCCEEEEEcCC--ccccCCCEEEEEEEEeEECCCCEEEEEeC-CeeccCCceeeeeEECCCCCEEEEEEeEEcCCCCCEE
Confidence            46766554432  24568899999999995 43 68999999 666654321    2234554444322     577889


Q ss_pred             EEEEEe
Q psy8771         172 TCIAAS  177 (904)
Q Consensus       172 ~c~a~n  177 (904)
                      +|++..
T Consensus        79 tC~V~H   84 (100)
T d1muja1          79 DCKVEH   84 (100)
T ss_dssp             EEEEEC
T ss_pred             EEEEEE
Confidence            999875

>d1j8hd1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=97.01  E-value=0.001  Score=54.20  Aligned_cols=71  Identities=18%  Similarity=0.258  Sum_probs=48.6

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cc--c-c---C-CC------Cceee------cceEEEEeee-
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NI--E-L---T-PD------DKLPV------GRNVLTLDRV-  165 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~--~-~---~-~~------~~~~~------~~~~l~i~~l-  165 (904)
                      ++..|.. +.+.+|+.++|.|.........|.|++-. +.  . |   . ..      .++..      ....|.|.++ 
T Consensus         3 vtQ~p~~-v~~~~G~~vtl~C~~s~~~~~~i~WYrQ~pg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~   81 (115)
T d1j8hd1           3 VTQLGSH-VSVSEGALVLLRCNYSSSVPPYLFWYVQYPNQGLQLLLKYTSAATLVKGINGFEAEFKKSETSFHLTKPSAH   81 (115)
T ss_dssp             EECSCSE-EEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECGGGCEEECBGGGTBCCEEESSCC
T ss_pred             EEcCCCe-EEEcCCCCEEEEEEeCCCCceeEEEEEccCCCcceeeeEEeecccccccCCCCEEEECCCCCEEEEeecccc
Confidence            4455555 99999999999999987767789999821 11  1 1   0 01      11111      1236999998 


Q ss_pred             -cCCeEEEEEEEec
Q psy8771         166 -TESENYTCIAASV  178 (904)
Q Consensus       166 -~d~g~Y~c~a~n~  178 (904)
                       +|+|.|.|.+...
T Consensus        82 ~~Dsa~YyCa~~~~   95 (115)
T d1j8hd1          82 MSDAAEYFCAVSES   95 (115)
T ss_dssp             GGGCEEEEEEEESS
T ss_pred             ccCCccceeeecCC
Confidence             7999999988753

>d2esvd1 b.1.1.1 (D:4-116) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=97.00  E-value=0.0016  Score=52.32  Aligned_cols=63  Identities=17%  Similarity=0.333  Sum_probs=43.1

Q ss_pred             eEEecCCCeEEEEEEccCC-CCeEEEeeCC-ccc---c---------CCCCceee----cceEEEEeee--cCCeEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSP-MPFVKWRKGQ-NIE---L---------TPDDKLPV----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~-~~~---~---------~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      +.+.+|++++|.|...+.. ...+.|++.. +..   +         ....++..    ....|.|.++  +|+|.|.|.
T Consensus         8 vsv~~G~~vtl~C~~s~~~~~~~l~WYrq~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~Dsa~YyCa   87 (110)
T d2esvd1           8 MDCAEGRAANLPCNHSTISGNEYVYWYRQIHSQGPQYIIHGLKNNETNEMASLIITEDRKSSTLILPHATLRDTAVYYCI   87 (110)
T ss_dssp             EEEETTSCEEEEEECTTCCTTEEEEEEEECTTSCCEEEEEESSSCEECSSCEEEECTTCSEEEEEESSCCGGGCEEEEEE
T ss_pred             EEECCCCCEEEEEEEcCCCCCCeEEEEEECCCCccEEeeeeeceecccccceeeecccCCeeeehhcccccCCceEEEEE
Confidence            8999999999999987644 4568999831 211   1         00112221    2457999999  799999998


Q ss_pred             EEe
Q psy8771         175 AAS  177 (904)
Q Consensus       175 a~n  177 (904)
                      +..
T Consensus        88 ~~~   90 (110)
T d2esvd1          88 VVR   90 (110)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            754

>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD86 (b7-2), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.0017  Score=52.33  Aligned_cols=65  Identities=17%  Similarity=0.314  Sum_probs=42.1

Q ss_pred             eEEecCCCeEEEEEEccCCCC---eE--EEeeCCccccC---------------CCCcee--ecceEEEEeee--cCCeE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP---FV--KWRKGQNIELT---------------PDDKLP--VGRNVLTLDRV--TESEN  170 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p---~i--~W~k~~~~~~~---------------~~~~~~--~~~~~l~i~~l--~d~g~  170 (904)
                      +.+..|++++|.|.....+..   .+  .|.+++...+.               ...|..  .++.+|.|.+|  +|+|.
T Consensus         4 V~a~~G~tv~L~C~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~~D~G~   83 (110)
T d1ncna_           4 IQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGL   83 (110)
T ss_dssp             EEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCGGGCEE
T ss_pred             EEEEeCCcEEEEEEEeCCCCCCcceeEEEeeccccceEEEEeCCceecccCCcceEEEEeccCCeEEEEECCCChhHCEE
Confidence            778899999999998754432   23  45554332110               011111  24568999999  79999


Q ss_pred             EEEEEEecC
Q psy8771         171 YTCIAASVL  179 (904)
Q Consensus       171 Y~c~a~n~~  179 (904)
                      |.|.+....
T Consensus        84 Y~C~V~~~~   92 (110)
T d1ncna_          84 YQCIIHHKK   92 (110)
T ss_dssp             EEEEEEEEC
T ss_pred             EEEEEEecC
Confidence            999986443

>d2ak4d1 b.1.1.1 (D:1-116) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=96.93  E-value=0.0016  Score=52.82  Aligned_cols=73  Identities=16%  Similarity=0.278  Sum_probs=47.5

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEee--CCccc--c----CCC------Ccee--e----cceEEEEeee
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRK--GQNIE--L----TPD------DKLP--V----GRNVLTLDRV  165 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k--~~~~~--~----~~~------~~~~--~----~~~~l~i~~l  165 (904)
                      +...|.. +.+.+|++++|.|..... ....+.|++  .++.+  +    ...      .+..  .    ....|.|.++
T Consensus         3 VtQ~~~~-v~v~~G~~VtL~C~~~~~~~~~~~~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~   81 (114)
T d2ak4d1           3 VTQAQTE-ISVVEKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITAS   81 (114)
T ss_dssp             EECCCCE-EEEETTCCEEECCEEECSCSSCEEEEEEECTTCCCEEEEEEETTSCSEEEETTEEEEEETTTTEEEEEESSC
T ss_pred             EEecCCe-EEEeCCCCEEEEEEEcCCCcCccEEEEEccccCcceEeeeEeeeeecCCCCcceEEEEcCCCCEEEEeeccc
Confidence            4455555 899999999999987644 445689998  21211  1    001      1111  1    1347999999


Q ss_pred             --cCCeEEEEEEEecCc
Q psy8771         166 --TESENYTCIAASVLG  180 (904)
Q Consensus       166 --~d~g~Y~c~a~n~~g  180 (904)
                        +|+|.|.|.+....+
T Consensus        82 ~~~Dsg~YyCa~~~~~~   98 (114)
T d2ak4d1          82 QVVDSAVYFCALSGFYN   98 (114)
T ss_dssp             CGGGCEEEEEEEECSBT
T ss_pred             ccccCCCceEeCCCCCC
Confidence              799999998766544

>d2ij0c1 b.1.1.1 (C:1-117) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=96.92  E-value=0.002  Score=52.49  Aligned_cols=72  Identities=18%  Similarity=0.315  Sum_probs=49.6

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---c----C----------CCCceee-----cceEEEEe
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---L----T----------PDDKLPV-----GRNVLTLD  163 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---~----~----------~~~~~~~-----~~~~l~i~  163 (904)
                      +.+.|.. +.+.+|++++|+|...+.....+.|+|-. +..   +    .          ...++..     ....|.|.
T Consensus         4 v~Q~P~~-~~~~~G~~v~L~C~~~~~~~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~L~i~   82 (118)
T d2ij0c1           4 VSQHPSM-VIVKSGTSVKIECRSLDTNIHTMFWYRQFPKQSLMLMATSHQGFNAIYEQGVVKDKFLINHASPTLSTLTVT   82 (118)
T ss_dssp             EEEECSE-EEECTTCCEEEEEEECSSCCSEEEEEEECTTSCEEEEEEEETTSCCEECTTCCTTTEEEEECSSSEEEEEEC
T ss_pred             EEEcCCe-EEEcCCCCEEEEEEEcCCcccEEEEEEEcccccceeeeeccccccceeccccccccceeecccccccccccc
Confidence            4444555 88999999999999988777889999821 211   1    0          1123332     12469999


Q ss_pred             ee--cCCeEEEEEEEecC
Q psy8771         164 RV--TESENYTCIAASVL  179 (904)
Q Consensus       164 ~l--~d~g~Y~c~a~n~~  179 (904)
                      ++  +|++.|.|.+.-..
T Consensus        83 ~~~~~Dsa~YyCa~~~~~  100 (118)
T d2ij0c1          83 SAHPEDSGFYVCSALAGS  100 (118)
T ss_dssp             SCCGGGCEEEEEEEECSS
T ss_pred             ccccccCceEEEEEecCC
Confidence            98  79999999886543

>d1akjd_ b.1.1.1 (D:) CD8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.0013  Score=53.41  Aligned_cols=70  Identities=21%  Similarity=0.291  Sum_probs=47.6

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCC-ccccC------------------CCCceee----cceEEEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQ-NIELT------------------PDDKLPV----GRNVLTL  162 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~-~~~~~------------------~~~~~~~----~~~~l~i  162 (904)
                      +...|.. +++.+|++++|.|.+.+.. ...|.|++-. +..+.                  ...|+..    ....|.|
T Consensus         3 ~~~sP~~-~t~~~G~~vtL~C~~~~~~~~~~i~WyrQ~~g~~~~~~~~i~~~~~~~~~~~~~~~~rfs~~~~~~~~~L~I   81 (114)
T d1akjd_           3 FRVSPLD-RTWNLGETVELKCQVLLSNPTSGCSWLFQPRGAAASPTFLLYLSQNKPKAAEGLDTQRFSGKRLGDTFVLTL   81 (114)
T ss_dssp             EEEECCS-CCCCTTCCEEEEEEECCSSCCSCEEEEEECSSTTCCCEEEEEESSSCCEECTTCCTTTEEEEEETTEEEEEE
T ss_pred             eeECCCc-EeccCCCcEEEEEEeCCCcCCCCEEEEEECCCCCcEEEEEEecCCCeeEcCCCCCCcEEEEECCCCChhcEE
Confidence            4455666 8899999999999987654 4569999821 11100                  0123322    2347999


Q ss_pred             eee--cCCeEEEEEEEe
Q psy8771         163 DRV--TESENYTCIAAS  177 (904)
Q Consensus       163 ~~l--~d~g~Y~c~a~n  177 (904)
                      .+|  +|+|.|.|.+..
T Consensus        82 ~~l~~~Dsg~YyCa~~~   98 (114)
T d1akjd_          82 SDFRRENEGYYFCSALS   98 (114)
T ss_dssp             SSCCGGGCEEEEEEEEE
T ss_pred             ccCCCCCCEEEeEeEcC
Confidence            999  799999998763

>d1jhll_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=96.89  E-value=0.0018  Score=51.62  Aligned_cols=69  Identities=16%  Similarity=0.257  Sum_probs=47.3

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---c-C--------CCCceee----cceEEEEeee--cCC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---L-T--------PDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---~-~--------~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      .+.|.. +++.+|+.++|.|...+.....+.|++-. +..   + .        ...++..    .+..|.|.+|  +|+
T Consensus         5 tQ~P~~-l~~~~G~svtL~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~l~~~Ds   83 (108)
T d1jhll_           5 TQSPSY-LVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDF   83 (108)
T ss_dssp             EEECSE-EEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCC
T ss_pred             EccCCe-EEecCCCCEEEEEEccCCcCCceEEEEccccCCCeEEEEeeccccCCccccccccCCCCEEEeEeeeeEeccc
Confidence            344555 88999999999999988777789999831 111   1 0        0111221    2347999999  799


Q ss_pred             eEEEEEEEe
Q psy8771         169 ENYTCIAAS  177 (904)
Q Consensus       169 g~Y~c~a~n  177 (904)
                      +.|.|.+.+
T Consensus        84 a~YyCA~~~   92 (108)
T d1jhll_          84 AMYICQQHN   92 (108)
T ss_dssp             SEEEEEECS
T ss_pred             eEEEEeeCC
Confidence            999997654

>d1mqkl_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=96.88  E-value=0.0016  Score=52.01  Aligned_cols=68  Identities=13%  Similarity=0.329  Sum_probs=47.6

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cc---ccC---------CCCceee----cceEEEEeee--cCC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NI---ELT---------PDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~---~~~---------~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      ++.|.. +.+.+|+.++|.|.........+.|++.. +.   .+.         ...++..    ....|.|.++  +|+
T Consensus         5 tQsP~~-l~~~~G~svtL~C~~s~~~~~~i~WYrQ~pg~~p~~li~~~~~~~~~~~~~fs~~~~~~~~~L~I~~~~~~DS   83 (109)
T d1mqkl_           5 TQTPVS-LSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDF   83 (109)
T ss_dssp             EEECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             ECcCCE-EEECCCCCEEEEEEeCCCcCcccceeeccccCCCeEEEEeeccccCCcCCCEEEeccCCEEEEEEccccccCC
Confidence            344555 88999999999999987777779999821 21   110         1123332    2457999998  799


Q ss_pred             eEEEEEEE
Q psy8771         169 ENYTCIAA  176 (904)
Q Consensus       169 g~Y~c~a~  176 (904)
                      |.|.|.+.
T Consensus        84 a~YyCA~~   91 (109)
T d1mqkl_          84 GSYYCQHH   91 (109)
T ss_dssp             EEEEEEEC
T ss_pred             eeEEEeee
Confidence            99999765

>d1fo0a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=96.84  E-value=0.002  Score=52.31  Aligned_cols=72  Identities=17%  Similarity=0.265  Sum_probs=47.3

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCC-c-c-c-c------CC----CCceee------cceEEEEeee
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQ-N-I-E-L------TP----DDKLPV------GRNVLTLDRV  165 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~-~-~-~-~------~~----~~~~~~------~~~~l~i~~l  165 (904)
                      +...|.. +.+.+|++++|.|...+. ....+.|++.. + . . +      ..    ..++..      ....|.|.++
T Consensus         2 VtQ~p~~-v~~~~G~~Vtl~C~~~~~~~~~~i~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~   80 (115)
T d1fo0a_           2 VTQTQTS-ISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITAT   80 (115)
T ss_dssp             EECCCCE-EEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSC
T ss_pred             eEccCCE-EEEcCCCCEEEEEEEcCCCCCCCCEEEEeCCCCCCEEEEEEecceeecccCCceEEEEeccCCEEEEEECCC
Confidence            3445555 999999999999998653 44568999821 1 1 1 1      00    012221      1346999999


Q ss_pred             --cCCeEEEEEEEecC
Q psy8771         166 --TESENYTCIAASVL  179 (904)
Q Consensus       166 --~d~g~Y~c~a~n~~  179 (904)
                        +|+|.|.|.+....
T Consensus        81 ~~~Dsa~YyCa~~~~~   96 (115)
T d1fo0a_          81 QIEDSAVYFCAMRGDY   96 (115)
T ss_dssp             CGGGCEEEEEEEECCC
T ss_pred             CccccccccceeecCC
Confidence              79999999876543

>d2atpb1 b.1.1.1 (B:1-115) CD8 {Mouse (Mus musculus), beta-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD8
species: Mouse (Mus musculus), beta-chain [TaxId: 10090]

Probab=96.84  E-value=0.0011  Score=53.91  Aligned_cols=66  Identities=18%  Similarity=0.382  Sum_probs=44.9

Q ss_pred             CCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCC----cccc------C-----------CCCceee------cceEEE
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQ----NIEL------T-----------PDDKLPV------GRNVLT  161 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~----~~~~------~-----------~~~~~~~------~~~~l~  161 (904)
                      .|.. +.+.+|+.++|.|.+.+. ....|.|++-.    +..+      .           ...|+..      ....|.
T Consensus         4 ~P~~-~~v~~G~sv~l~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~   82 (115)
T d2atpb1           4 TPSS-LLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLS   82 (115)
T ss_dssp             ECSE-EEECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEE
T ss_pred             eCCc-EEEcCCCCEEEEEEEeCCCCCCceEEEEeecCCCCeEEEEeeEEecccCcEecCCcCCCCEEEEEeCCCCeEEEe
Confidence            3445 899999999999999874 44679999731    1101      0           1122221      234799


Q ss_pred             Eeee--cCCeEEEEEEE
Q psy8771         162 LDRV--TESENYTCIAA  176 (904)
Q Consensus       162 i~~l--~d~g~Y~c~a~  176 (904)
                      |.++  +|+|.|.|.+.
T Consensus        83 I~~~~~~Dsg~Y~Ca~~   99 (115)
T d2atpb1          83 IMNVKPEDSDFYFCATV   99 (115)
T ss_dssp             ECSCCGGGCEEEEEEEE
T ss_pred             ecccCCCCCcEEEEeEc
Confidence            9999  79999999765

>d1hkfa_ b.1.1.1 (A:) NK cell activating receptor NKP44 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: NK cell activating receptor NKP44
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.0053  Score=49.07  Aligned_cols=65  Identities=17%  Similarity=0.270  Sum_probs=43.4

Q ss_pred             eEEecCCCeEEEEEEccCC--CCeEEEeeCC-ccc---c---------CCCCceee------cceEEEEeee--cCCeEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NIE---L---------TPDDKLPV------GRNVLTLDRV--TESENY  171 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~~---~---------~~~~~~~~------~~~~l~i~~l--~d~g~Y  171 (904)
                      +.+.+|+.++|.|...+..  ...+.|+|.. +..   +         ....|+..      +..+|.|.+|  +|+|.|
T Consensus         6 v~~~~G~svtl~C~~~~~~~~~~~~~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~l~~~DsG~Y   85 (108)
T d1hkfa_           6 LQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHY   85 (108)
T ss_dssp             EEECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred             EEEcCCCCEEEEEEECCCCCCCCEEEEEEeCCCCCcEEeeeccCccccceeeeEeeeeeCCCCEEEEEEhhhCCCCCEEE
Confidence            8889999999999976543  2467898731 110   0         11133322      2347999999  699999


Q ss_pred             EEEEEecC
Q psy8771         172 TCIAASVL  179 (904)
Q Consensus       172 ~c~a~n~~  179 (904)
                      .|.+....
T Consensus        86 ~C~v~~~~   93 (108)
T d1hkfa_          86 WCRIYRPS   93 (108)
T ss_dssp             EEEEECTT
T ss_pred             EEEEecCC
Confidence            99877433

>d1vcaa1 b.1.1.3 (A:91-199) Vascular cell adhesion molecule-1 (VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: Vascular cell adhesion molecule-1 (VCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.0028  Score=50.81  Aligned_cols=73  Identities=14%  Similarity=0.241  Sum_probs=45.0

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEcc-CCCC--eEEEeeCCccccCCCCc---e-----eecceEEEEeee--cCCeE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMP--FVKWRKGQNIELTPDDK---L-----PVGRNVLTLDRV--TESEN  170 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p--~i~W~k~~~~~~~~~~~---~-----~~~~~~l~i~~l--~d~g~  170 (904)
                      .|.|....    .+.+|+.++|.|.+.| .|.+  +|+|+++ +..+.....   .     ......|.+.-.  .++..
T Consensus         4 ~P~I~~~~----~l~~G~~~~l~C~v~~~~P~~~~~i~W~~g-~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~~~D~g~~   78 (109)
T d1vcaa1           4 DPEIHLSG----PLEAGKPITVKCSVADVYPFDRLEIDLLKG-DHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKV   78 (109)
T ss_dssp             CCEEEESS----CEETTSCEEEEEEEEEEBSGGGEEEEEEET-TEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCE
T ss_pred             CCEEecCC----CccCCCeEEEEeEeCCcCCCCceEEEEecc-CceeeccccccccccCCcceeeEEEEccCChHHCCcE
Confidence            46665432    2569999999999986 6754  6899998 554421100   0     001123444332  35668


Q ss_pred             EEEEEEecCcc
Q psy8771         171 YTCIAASVLGV  181 (904)
Q Consensus       171 Y~c~a~n~~g~  181 (904)
                      |+|+|.+..+.
T Consensus        79 ltC~a~~~~~~   89 (109)
T d1vcaa1          79 LVCRAKLHIDE   89 (109)
T ss_dssp             EEEEEEECSCC
T ss_pred             EEEEEEcCcCC
Confidence            99999987654

>d8faba1 b.1.1.1 (A:3-105) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 5 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Human (Homo sapiens), cluster 5 [TaxId: 9606]

Probab=96.80  E-value=0.0011  Score=52.57  Aligned_cols=63  Identities=17%  Similarity=0.330  Sum_probs=44.2

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      +++.+|++++|.|...+.....+.|++-. |..+            ....++..    ....|.|.+|  +|++.|.|.+
T Consensus         8 l~~~~G~svtl~C~~~~~~~~~~~WYrQ~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Dsa~YyCA~   87 (103)
T d8faba1           8 VSVSPGQTARITCSANALPNQYAYWYQQKPGRAPVMVIYKDTQRPSGIPQRFSSSTSGTTVTLTISGVQAEDEADYYCQA   87 (103)
T ss_dssp             EEECTTSCEEEEEECTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCEEEEEEE
T ss_pred             EEECCCCCEEEEEEeCCCCCCCEEEEEccCCCceEEEeeeecccccccCCcEEECCCCCccCceEcCcchhHCceEEeee
Confidence            88999999999999887666778999831 1111            00122221    3457999999  6999999976


Q ss_pred             Ee
Q psy8771         176 AS  177 (904)
Q Consensus       176 ~n  177 (904)
                      ..
T Consensus        88 ~~   89 (103)
T d8faba1          88 WD   89 (103)
T ss_dssp             EE
T ss_pred             cC
Confidence            54

>d2rhea_ b.1.1.1 (A:) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 2 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Human (Homo sapiens), cluster 2 [TaxId: 9606]

Probab=96.78  E-value=0.0081  Score=48.14  Aligned_cols=63  Identities=16%  Similarity=0.282  Sum_probs=44.3

Q ss_pred             eEEecCCCeEEEEEEccCC--CCeEEEeeCCcc-c---c---------CCCCceee----cceEEEEeee--cCCeEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSP--MPFVKWRKGQNI-E---L---------TPDDKLPV----GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~~~-~---~---------~~~~~~~~----~~~~l~i~~l--~d~g~Y~c  173 (904)
                      +.+.+|++++|.|.+.+..  ...+.|++-... .   +         ....++..    ....|.|.+|  +|++.|.|
T Consensus        10 ~~v~~G~svtL~C~~s~~~~~~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsA~YyC   89 (114)
T d2rhea_          10 ASGTPGQRVTISCTGSATDIGSNSVIWYQQVPGKAPKLLIYYNDLLPSGVSDRFSASKSGTSASLAISGLESEDEADYYC   89 (114)
T ss_dssp             EEECTTCCEEEEEECCTTTTTTSCEEEEECCTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred             EEeCCCCCEEEEEEECCccccCCcccceeeecccceEEEEEEeeeeccCCCCcceecCCCCeeeeEecccCcccCceEEE
Confidence            8889999999999998764  457999984211 1   1         01123332    2458999999  79999999


Q ss_pred             EEEe
Q psy8771         174 IAAS  177 (904)
Q Consensus       174 ~a~n  177 (904)
                      .+..
T Consensus        90 A~~~   93 (114)
T d2rhea_          90 AAWN   93 (114)
T ss_dssp             EEEE
T ss_pred             eecC
Confidence            8753

>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD80, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00089  Score=53.56  Aligned_cols=67  Identities=15%  Similarity=0.245  Sum_probs=45.9

Q ss_pred             eEEecCCCeEEEEEEccCCC----CeEEEeeCCccccC--C---------CCceee---cceEEEEeee--cCCeEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM----PFVKWRKGQNIELT--P---------DDKLPV---GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~----p~i~W~k~~~~~~~--~---------~~~~~~---~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      +++..|+.++|.|.......    ..+.|.+++...+.  .         ..|+..   ++.+|.|.++  +|+|.|.|.
T Consensus         4 Vt~~~G~~a~L~C~~~~~~~~~~~~~v~w~~~~~~v~~~~~~~~~~~~~~~~r~~~~~~g~~sL~I~~v~~~D~G~Y~C~   83 (105)
T d1dr9a1           4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECV   83 (105)
T ss_dssp             EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEE
T ss_pred             EEEEeCCCEEEEEEECCcccceeEEEEEEEecceEEEEEEeccceeecceeeeeeeccCCcEEEEECcCChHHCeEEEEE
Confidence            78899999999998764332    35789887332211  0         122222   3458999999  799999999


Q ss_pred             EEecCcc
Q psy8771         175 AASVLGV  181 (904)
Q Consensus       175 a~n~~g~  181 (904)
                      +.+..+.
T Consensus        84 V~~~~~~   90 (105)
T d1dr9a1          84 VLKYEKD   90 (105)
T ss_dssp             EEECCTT
T ss_pred             EEeCCCC
Confidence            8765444

>d1d5il1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=96.77  E-value=0.0022  Score=51.07  Aligned_cols=69  Identities=13%  Similarity=0.307  Sum_probs=47.9

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc---C---------CCCceee----cceEEEEeee--cCC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL---T---------PDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~---~---------~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      .+.|.. +.+.+|+.++|.|.........+.|++.. +..+   .         ...|+..    .+..|.|.+|  +|+
T Consensus         5 tQ~P~s-l~~~~G~svtl~C~~s~~~~~~~~WYrq~pg~~~~~l~~~~~~~~~~~~~rf~~~~~~~~~~L~I~~~~~~Ds   83 (107)
T d1d5il1           5 TQSPSS-MYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDM   83 (107)
T ss_dssp             EEECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             EeeCCE-EEECCCCCEEEEEEcCCCCCCccceeEeccccCeEEEEEeccccccCcCCceeecccCCEEEccccccCCcCC
Confidence            344545 88999999999999988777779999731 2111   0         1123332    2358999999  799


Q ss_pred             eEEEEEEEe
Q psy8771         169 ENYTCIAAS  177 (904)
Q Consensus       169 g~Y~c~a~n  177 (904)
                      +.|.|.+..
T Consensus        84 a~YyCa~~~   92 (107)
T d1d5il1          84 GIYYCLQYD   92 (107)
T ss_dssp             EEEEEEECS
T ss_pred             EEEEeeecc
Confidence            999997643

>d1u3ha1 b.1.1.1 (A:2-116) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=96.76  E-value=0.0012  Score=53.32  Aligned_cols=69  Identities=19%  Similarity=0.342  Sum_probs=46.7

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccccC-------C-----CCceee------cceEEEEeee--c
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIELT-------P-----DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~~-------~-----~~~~~~------~~~~l~i~~l--~  166 (904)
                      .+.|.. +.+.+|+.++|.|...+.....+.|++-. +....       .     ..+...      ....|.|.++  +
T Consensus         3 ~Q~P~~-~~~~~G~~vtl~C~~~~~~~~~~~WYrq~pg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~   81 (110)
T d1u3ha1           3 RQSPQS-LTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPG   81 (110)
T ss_dssp             ECSCSS-EEEETTSCEEEEEEECCTTEEEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETGGGEEEEEESSCCTT
T ss_pred             EecCCE-EEEcCCCCEEEEEEecCCCCcEEEEEeeccccceeeeeeeccccccccccceeEEECCCCCeeEeEeccCCCC
Confidence            344555 88999999999999887666679999831 11110       0     011111      2347999999  7


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |+|.|.|.+.-
T Consensus        82 Dsa~YyCa~~~   92 (110)
T d1u3ha1          82 DSATYFCAASA   92 (110)
T ss_dssp             SCSEEEECCEE
T ss_pred             CceeEeeeecC
Confidence            99999998753

>d1bwwa_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable domain, VL-kappa {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=96.76  E-value=0.0024  Score=51.16  Aligned_cols=69  Identities=13%  Similarity=0.364  Sum_probs=47.6

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---cC---------CCCceee----cceEEEEeee--cCC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---LT---------PDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---~~---------~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      ++.|.. +.+.+|+.++|.|...+.....+.|++.. +..   +.         ...++..    ....|.|.+|  +|+
T Consensus         7 tQsP~~-l~~~~G~svtL~C~~s~~~~~~~~WYrq~~g~~p~~l~~~~~~~~~~~~~~fs~~~~~~~~~L~I~~l~~~Ds   85 (109)
T d1bwwa_           7 TQSPSS-LSASVGDRVTITCQASQDIIKYLNWYQQKPGKAPKLLIYEASNLQAGVPSRFSGSGSGTDYTFTISSLQPEDI   85 (109)
T ss_dssp             EEECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             EeeCCE-EEECCCCCEEEEEEecCCCCCcceEeeeccCCCCEEEEEecccCCCCCCCCEEeeCCCCEeEEEEeeceeCcC
Confidence            344444 88999999999999988777779999831 111   10         1123332    2347999999  799


Q ss_pred             eEEEEEEEe
Q psy8771         169 ENYTCIAAS  177 (904)
Q Consensus       169 g~Y~c~a~n  177 (904)
                      +.|.|.+..
T Consensus        86 a~YyCA~~~   94 (109)
T d1bwwa_          86 ATYYCQQYQ   94 (109)
T ss_dssp             EEEEEEECS
T ss_pred             ceEEEeecC
Confidence            999997653

>d3cx5k1 b.1.1.1 (K:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=96.74  E-value=0.0011  Score=52.96  Aligned_cols=69  Identities=19%  Similarity=0.360  Sum_probs=47.9

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---c---------CCCCceee----cceEEEEeee--cC
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---L---------TPDDKLPV----GRNVLTLDRV--TE  167 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---~---------~~~~~~~~----~~~~l~i~~l--~d  167 (904)
                      +++.|.. +.+.+|++++|.|...+.....+.|++-. |..   |         ....++..    ...+|.|.++  +|
T Consensus         4 ltQsP~s-~~~~~G~~vtl~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~f~~~~~~~~~~L~I~~~~~~D   82 (107)
T d3cx5k1           4 LTQTPVS-LAASLGDRVTISCRASQDINNFLNWYQQKPDGTIKLLIYYTSRLHAGVPSRFSGSGSGTDYSLTISNLEPED   82 (107)
T ss_dssp             EEEESTT-CCBCSSSCCEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTCCCEEETTEEEEECSCCCSCC
T ss_pred             EECcCCE-EEECCCCCEEEEEEcCCCcCCCeEEEEcCCCCcceEEEEeecccCCCcCCCEEEEccCCEEEEEEeEeeecC
Confidence            3444555 88999999999999888777779999731 211   0         01122221    3458999999  79


Q ss_pred             CeEEEEEEE
Q psy8771         168 SENYTCIAA  176 (904)
Q Consensus       168 ~g~Y~c~a~  176 (904)
                      +|.|.|.+.
T Consensus        83 sa~YyCa~~   91 (107)
T d3cx5k1          83 IATYFCQHH   91 (107)
T ss_dssp             CSEEEEEEC
T ss_pred             CCcEEeeeC
Confidence            999999754

>d1lk2b_ b.1.1.2 (B:) beta2-microglobulin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: beta2-microglobulin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.70  E-value=0.0017  Score=50.80  Aligned_cols=72  Identities=15%  Similarity=0.141  Sum_probs=44.0

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCCce---eecceEEEEeee-----cCCeEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDKL---PVGRNVLTLDRV-----TESENYT  172 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~~---~~~~~~l~i~~l-----~d~g~Y~  172 (904)
                      .||.+...+..  ....|+.++|.|.+.|. |. ..|+|.++ |..+......   ...++++.+...     +++..|+
T Consensus         3 ~~P~V~v~~~~--~~~~~~~~tL~C~v~gf~P~~i~V~W~~~-g~~~~~~~~~~~~~~~dgtf~~~s~l~v~~~~~~~yt   79 (99)
T d1lk2b_           3 KTPQIQVYSRH--PPENGKPNILNCYVTQFHPPHIEIQMLKN-GKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYA   79 (99)
T ss_dssp             BCCEEEEEESS--CCCTTSCEEEEEEEEEEBSSCCEEEEEET-TEECTTCEEEEEEECTTCCEEEEEEEEECCCSSCCEE
T ss_pred             CCCEEEEEcCC--CccCCCcEEEEEEEEEEECCCcEEEEeeC-CeecCCcEECceeECCCCCEEEEEEeEecCcCCCEEE
Confidence            45665433221  12468889999999995 54 57999999 6665543221   124444444332     4677899


Q ss_pred             EEEEe
Q psy8771         173 CIAAS  177 (904)
Q Consensus       173 c~a~n  177 (904)
                      |.+.-
T Consensus        80 C~V~H   84 (99)
T d1lk2b_          80 CRVKH   84 (99)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            98864

>d1bd2d1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=96.66  E-value=0.0025  Score=51.32  Aligned_cols=69  Identities=22%  Similarity=0.261  Sum_probs=47.5

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc-------CC-----CCceee------cceEEEEeee--c
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL-------TP-----DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~-------~~-----~~~~~~------~~~~l~i~~l--~  166 (904)
                      ...|.. +.+.+|+.++|.|...+.....+.|++-. |..+       ..     ..++..      ....|.|.++  +
T Consensus         4 ~Q~p~s-~~~~~G~svtl~C~~s~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~   82 (111)
T d1bd2d1           4 KQNSPS-LSVQEGRISILNCDYTNSMFDYFLWYKKYPAEGPTFLISISSIKDKNADGRFTVFLNKSAKHLSLHIVPSQPG   82 (111)
T ss_dssp             ECCCSE-EEEETTSCEEEEEEECCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGG
T ss_pred             EccCCE-EEEcCCCCEEEEEEeCCCCCCeEEEEEECCCCcceeeeeeeceeccccCCcceEEEEccCCEEEEEECCCccc
Confidence            344455 88999999999999888877789999821 2111       00     112221      2448999999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |+|.|.|.+..
T Consensus        83 Dsa~YyCa~~~   93 (111)
T d1bd2d1          83 DSAVYFCAAME   93 (111)
T ss_dssp             GCEEEEEEEES
T ss_pred             ccEEEEeeccC
Confidence            99999997763

>d1k5nb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: beta2-microglobulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.0015  Score=51.15  Aligned_cols=73  Identities=16%  Similarity=0.136  Sum_probs=46.7

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCC---ceeecceEEEEeee-----cCCeEE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDD---KLPVGRNVLTLDRV-----TESENY  171 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~---~~~~~~~~l~i~~l-----~d~g~Y  171 (904)
                      ..||.+..-+..  .+..|+.++|.|.+.|. |. ..|+|.+| |..+....   -....++++.+...     ++++.|
T Consensus         3 ~~~P~V~v~~~~--~~~~~~~~tL~C~~~gFyP~~i~v~W~~n-g~~v~~~~~~~~~~~~dgty~~~s~l~v~~~~~~~y   79 (100)
T d1k5nb_           3 QRTPKIQVYSRH--PAENGKSNFLNCYVSGFHPSDIEVDLLKN-GERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEY   79 (100)
T ss_dssp             CBCCEEEEEESS--CCCTTSCEEEEEEEEEEBSSCCEEEEEET-TEECTTCEECCCEECTTSCEEEEEEEEECCCSSCCE
T ss_pred             cCCCeeEEEcCC--cccCCCCEEEEEEECccCCCCcEEEEEEC-CEecCCccccceecCCCCcEEEEEEeEECCCCCCEE
Confidence            456665443221  23578999999999995 54 47899999 66664322   22335555544332     477899


Q ss_pred             EEEEEe
Q psy8771         172 TCIAAS  177 (904)
Q Consensus       172 ~c~a~n  177 (904)
                      +|.+.-
T Consensus        80 tC~V~H   85 (100)
T d1k5nb_          80 ACRVNH   85 (100)
T ss_dssp             EEEEEC
T ss_pred             EEEEEe
Confidence            999865

>d2fx7l1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Human (Homo sapiens), cluster 3.2 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Human (Homo sapiens), cluster 3.2 [TaxId: 9606]

Probab=96.65  E-value=0.0031  Score=50.40  Aligned_cols=69  Identities=20%  Similarity=0.269  Sum_probs=46.4

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCC-cc---cc---------CCCCceee----cceEEEEeee--c
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQ-NI---EL---------TPDDKLPV----GRNVLTLDRV--T  166 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~-~~---~~---------~~~~~~~~----~~~~l~i~~l--~  166 (904)
                      +++.|.. +.+.+|+.++|.|...+.. ...+.|++-. +.   .+         ....++..    +...|.|.++  +
T Consensus         4 ltQ~P~~-~~v~~G~tv~l~C~~~~~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~L~I~~~~~~   82 (108)
T d2fx7l1           4 LTQSPGT-QSLSPGERATLSCRASQSVGNNKLAWYQQRPGQAPRLLIYGASSRPSGVADRFSGSGSGTDFTLTISRLEPE   82 (108)
T ss_dssp             EECSSSE-EEECTTCCEEEEEEESSCCGGGCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred             EEeeCCe-EEECCCCCEEEEEEeecCCCCccceeEeccccCCCEEEEeeecccccCCccceeeecCCCEEEEEehHheec
Confidence            3455555 8899999999999987653 4568999831 21   11         01123332    2347999999  7


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |+|.|.|.+.
T Consensus        83 Dsa~YyCa~~   92 (108)
T d2fx7l1          83 DFAVYYCQQY   92 (108)
T ss_dssp             GCSEEEEEEC
T ss_pred             ccEEEeeecC
Confidence            9999999764

>d1q9ra1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 1.2 [TaxId: 10090]

Probab=96.62  E-value=0.0032  Score=50.67  Aligned_cols=67  Identities=19%  Similarity=0.341  Sum_probs=44.0

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCC------CCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSP------MPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV  165 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p------~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l  165 (904)
                      +.|.. +.+.+|++++|.|.+.+.-      ...|.|++.. |..+            ....++..    ....|.|.+|
T Consensus         6 Q~P~~-v~~~~G~svtL~C~~s~~~~~~~~~~~~~~WYrq~~g~~p~ll~~~~~~~~~~~~~~~s~~~s~~~~~L~I~~l   84 (113)
T d1q9ra1           6 QSPSS-LAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTITSV   84 (113)
T ss_dssp             EECSE-EEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSC
T ss_pred             ccCCE-EEECCCCCEEEEEEECCCcccCCCCCcceEEEecCCCCCCEEEEecccccCCCCCccEEEeCCCCeEeEEeccc
Confidence            44444 8899999999999887531      1348999831 1110            11123322    2347999999


Q ss_pred             --cCCeEEEEEEE
Q psy8771         166 --TESENYTCIAA  176 (904)
Q Consensus       166 --~d~g~Y~c~a~  176 (904)
                        +|+|.|.|.+.
T Consensus        85 ~~~Dsa~YyCA~~   97 (113)
T d1q9ra1          85 QAEDLAVYYCKQS   97 (113)
T ss_dssp             CGGGCEEEEEEEC
T ss_pred             ccCCCeEEEeccc
Confidence              79999999764

>d1ogad1 b.1.1.1 (D:3-117) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=96.60  E-value=0.0061  Score=49.16  Aligned_cols=81  Identities=16%  Similarity=0.306  Sum_probs=51.0

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------CCC------Ccee--e----cceEEEEeee--cC
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------TPD------DKLP--V----GRNVLTLDRV--TE  167 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------~~~------~~~~--~----~~~~l~i~~l--~d  167 (904)
                      ..|.. +++.+|++++|.|...+. ...+.|++-. |..+      ...      .++.  .    ....|.|.++  +|
T Consensus         5 Q~P~~-~~~~~G~svtl~C~~s~~-~~~~~WYrQ~pg~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D   82 (115)
T d1ogad1           5 QSPQF-LSIQEGENLTVYCNSSSV-FSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKRLTFQFGDARKDSSLHITAAQPGD   82 (115)
T ss_dssp             EECSE-EEEETTCCEEEEEECSSC-CSCEEEEEECTTSCCEEEEEECSTTCEEEETTEEEEECTTSSEEEEEESSCCGGG
T ss_pred             eCCCe-EEECCCCCEEEEEEECCC-CceEEEEecCCCCceeeeeeeeecccceeecccccccccccceeeeeecCCCccc
Confidence            44445 899999999999998765 3468999821 2111      000      1221  1    2457999999  79


Q ss_pred             CeEEEEEEEecCcceE--EEEEEEEE
Q psy8771         168 SENYTCIAASVLGVIE--TSTIVKVQ  191 (904)
Q Consensus       168 ~g~Y~c~a~n~~g~~~--~~~~l~v~  191 (904)
                      +|.|.|.+....+...  ....|.|.
T Consensus        83 sa~YyCa~~~~~~~~~FG~GT~LtV~  108 (115)
T d1ogad1          83 TGLYLCAGAGSQGNLIFGKGTKLSVK  108 (115)
T ss_dssp             CEEEEEEEECTTSSEEECCCEEEEEE
T ss_pred             eeeEcccccCCCCCcEECCCEEEEEe
Confidence            9999998764433221  34456665

>d2gsia1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 2 [TaxId: 10090]

Probab=96.59  E-value=0.005  Score=49.24  Aligned_cols=69  Identities=20%  Similarity=0.394  Sum_probs=45.4

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccC-C---CCeEEEeeCC-cccc----C--------CCCceee----cceEEEEeee-
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGS-P---MPFVKWRKGQ-NIEL----T--------PDDKLPV----GRNVLTLDRV-  165 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~-p---~p~i~W~k~~-~~~~----~--------~~~~~~~----~~~~l~i~~l-  165 (904)
                      ++.|.. +.+.+|++++|.|..++. .   ...+.|++.. +..+    .        ...|+..    ....|.|.++ 
T Consensus         5 tQsP~s-~s~~~G~svtL~C~~s~~~~~~~~~~i~WYrQ~pg~~~~~li~~~~~~~~g~~~rfs~~~~~~~~~L~I~~~~   83 (111)
T d2gsia1           5 TQSPAS-LAVSLGQPATISCGASKSVRTSGYSYMDWNQQKPGQPPRRLIYLVSNLESGVPARFSGSGSGTDFTLNIHPVE   83 (111)
T ss_dssp             EEECSE-EEEETTSCEEEEEEESSCCCCSSSCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred             EeeCCE-EEECCCCCEEEEEEECCCCccCCccceEEEEECCCCccEEEEEccCccCCCcCCcEEEecCCCchhccccccc
Confidence            344555 899999999999998753 2   2348999831 1111    0        1134432    2457999999 


Q ss_pred             -cCCeEEEEEEEe
Q psy8771         166 -TESENYTCIAAS  177 (904)
Q Consensus       166 -~d~g~Y~c~a~n  177 (904)
                       +|++.|.|.+..
T Consensus        84 ~~DsA~YyCa~~~   96 (111)
T d2gsia1          84 EEDAATYYCSHIR   96 (111)
T ss_dssp             GGGCEEEEEEECS
T ss_pred             ccCCceEEEEECC
Confidence             799999997643

>d1yqvl1 b.1.1.1 (L:2-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=96.59  E-value=0.0035  Score=49.65  Aligned_cols=67  Identities=13%  Similarity=0.308  Sum_probs=43.9

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcc-cc----------C--CCCceee----cceEEEEeee--cCC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI-EL----------T--PDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~-~~----------~--~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      ++.|.. +.+.+|++++|.|..... ...+.|++-... .+          .  ...++..    ...+|.|.++  +|+
T Consensus         4 tQsP~~-l~~~~G~~vtl~C~~s~~-~~~~~WYrQ~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~L~I~~~~~~Ds   81 (104)
T d1yqvl1           4 TQSPAI-MSASPGEKVTMTCSASSS-VNYMYWYQQKSGTSPKRWIYDTSKLASGVPVRFSGSGSGTSYSLTISSMETEDA   81 (104)
T ss_dssp             EEESSE-EEECTTCCEEEEEEESSC-CSCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred             eCcCCe-EEECCCCCEEEEEEeCCC-CCccEEEEeeccCceEEEEecccccCCCcCceEEEecCCCEEEEEecccCcccC
Confidence            344555 889999999999987543 345799983211 10          0  1122222    2347999999  799


Q ss_pred             eEEEEEEE
Q psy8771         169 ENYTCIAA  176 (904)
Q Consensus       169 g~Y~c~a~  176 (904)
                      +.|.|.+.
T Consensus        82 a~YyCa~~   89 (104)
T d1yqvl1          82 ATYYCQQW   89 (104)
T ss_dssp             EEEEEEEC
T ss_pred             CeEEEEec
Confidence            99999653

>d1olla2 b.1.1.4 (A:96-188) Ligand binding domain of NK receptor NKp46 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of NK receptor NKp46
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0016  Score=50.09  Aligned_cols=70  Identities=16%  Similarity=0.218  Sum_probs=47.7

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEE
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ..|.|...|.  -.|..|++++|.|.... +...+.|+|++...... .........+.|.++  +|+|.|+|.-.
T Consensus         3 pkPsLsa~P~--~~V~~G~~VTL~C~~~~-~~~~f~L~Keg~~~~~~-~~~~~~~a~F~i~~v~~~~~G~Y~C~~~   74 (93)
T d1olla2           3 DTPTLSVHPG--PEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQ-RGYGKVQAEFPLGPVTTAHRGTYRCFGS   74 (93)
T ss_dssp             CCCEEEEESC--SEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEE-EEECSSEEEEEEEECCGGGCEEEEEECE
T ss_pred             CCCEEEEeCC--CcccCCCcEEEEECCCC-CCCEEEEEECCCcccee-ecCCCceeEEEecccChhcCceEEEEeE
Confidence            3577777776  56789999999998653 34568899983322111 111124567999999  69999999643

>d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=96.56  E-value=0.0067  Score=48.37  Aligned_cols=84  Identities=21%  Similarity=0.250  Sum_probs=50.5

Q ss_pred             CCCCCeEEEec--CCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee---------cCceEEEEcCCCCCCe
Q psy8771         483 TAPRDVQVRPL--SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV---------DNNQLTTISDLTPHTI  551 (904)
Q Consensus       483 ~~p~~l~v~~~--~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~L~p~t~  551 (904)
                      .+|..+.+.-.  ..+++.|+|...+..+..    .|+|....+...........         .....+.|++|+|++.
T Consensus        17 ~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~----~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~T~   92 (112)
T d2qfra1          17 NAPQQVHITQGDLVGRAMIISWVTMDEPGSS----AVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTK   92 (112)
T ss_dssp             TCCEEEEEEECSSSSSCEEEEEEESSSCCCC----EEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTTCE
T ss_pred             CCCccEEEeCcCCCCCEEEEEEECCCCCCCc----EEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCCCE
Confidence            45777777654  357999999875443323    34454443221111100000         1123579999999999


Q ss_pred             EEEEEEEEeCCCCCCCCCcEEEecC
Q psy8771         552 YTIRVQAFTSVGPGPLSAPVLVKTQ  576 (904)
Q Consensus       552 Y~~~V~a~~~~g~~~~S~~~~~~t~  576 (904)
                      |.++|      |.+.+|....|+|+
T Consensus        93 Y~YrV------G~~~~S~~~~F~T~  111 (112)
T d2qfra1          93 YYYEV------GLRNTTRRFSFITP  111 (112)
T ss_dssp             EEEEE------CCSSSCEEEEEECC
T ss_pred             EEEEE------CCCCceeeEEEEcC
Confidence            99998      23347888888884

>d1ac6a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=96.55  E-value=0.0031  Score=50.55  Aligned_cols=70  Identities=14%  Similarity=0.178  Sum_probs=47.6

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc--c-----CC-----CCceee------cceEEEEeee--c
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE--L-----TP-----DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~--~-----~~-----~~~~~~------~~~~l~i~~l--~  166 (904)
                      .+.|.. +.+.+|+.++|.|.....-...+.|++-. |..  +     ..     ..++..      ....|.|.++  +
T Consensus         4 tQ~p~~-~~~~~G~~vtl~C~~~~~~~~~~~WYrQ~pg~~p~~l~~~~~~~~~~~~~~f~~~~~~~~~~~~L~i~~~~~~   82 (110)
T d1ac6a_           4 TQTEGQ-VALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQES   82 (110)
T ss_dssp             EECCSE-EEEETTEEEEECEEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEEEEECGG
T ss_pred             EeCCCe-EEECCCCCEEEEEEecCCCCcceEEEEcCCCCceEEeeeeeeecccCCCCceeeeecCCCCEEeeeecCcCcC
Confidence            444555 89999999999999887666779999821 211  1     00     122221      2347999998  6


Q ss_pred             CCeEEEEEEEec
Q psy8771         167 ESENYTCIAASV  178 (904)
Q Consensus       167 d~g~Y~c~a~n~  178 (904)
                      |++.|.|.+...
T Consensus        83 Dsa~YyCA~~~~   94 (110)
T d1ac6a_          83 DSAVYYCALSGG   94 (110)
T ss_dssp             GCEEEEEEEEET
T ss_pred             CCcccceeecCC
Confidence            999999987643

>d1mjul1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]

Probab=96.52  E-value=0.0043  Score=49.79  Aligned_cols=67  Identities=18%  Similarity=0.335  Sum_probs=44.2

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCC-----CCeEEEeeCC-cccc----C--------CCCceee----cceEEEEeee
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSP-----MPFVKWRKGQ-NIEL----T--------PDDKLPV----GRNVLTLDRV  165 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p-----~p~i~W~k~~-~~~~----~--------~~~~~~~----~~~~l~i~~l  165 (904)
                      ++.|.. +.+.+|++++|.|...+..     ...|.|++.. |..+    .        ...|+..    ....|.|.+|
T Consensus         5 TQ~p~s-lsv~~G~svtL~C~~s~~~~~~~~~~~i~WYrq~~g~~~~~liy~~~~~~~~~~~r~~~~~s~~~~~L~Is~~   83 (112)
T d1mjul1           5 TQAAPS-VPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRISRV   83 (112)
T ss_dssp             ECCCSE-EEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEECSSEEEEEESSC
T ss_pred             EecCCE-EEECCCCCEEEEEEECCCCccCCCCceeEEEECCCCCcEEEEEEeCCcccCCCCCcEEeecCCCEEEEEECCc
Confidence            344444 8899999999999988742     3468999732 2111    0        1123322    2347999999


Q ss_pred             --cCCeEEEEEE
Q psy8771         166 --TESENYTCIA  175 (904)
Q Consensus       166 --~d~g~Y~c~a  175 (904)
                        +|++.|.|..
T Consensus        84 ~~~DsAvYyCa~   95 (112)
T d1mjul1          84 EAEDVGVYYCLQ   95 (112)
T ss_dssp             CGGGCEEEEEEE
T ss_pred             cccCCceEEEEe
Confidence              7999999953

>d1qfoa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: N-terminal domain of sialoadhesin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.52  E-value=0.0041  Score=50.75  Aligned_cols=67  Identities=15%  Similarity=0.138  Sum_probs=44.0

Q ss_pred             CCCceEEecCCCeEEEEEEcc---CC---CCeEEEeeCCccc---c-----------CCCCceee------cceEEEEee
Q psy8771         111 PPALLEVMLDSPLNLSCVAVG---SP---MPFVKWRKGQNIE---L-----------TPDDKLPV------GRNVLTLDR  164 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~~g---~p---~p~i~W~k~~~~~---~-----------~~~~~~~~------~~~~l~i~~  164 (904)
                      |.. +.+.+|+.|+|.|.+..   .+   ...+.|++.....   +           ....|+.+      ++.+|.|.+
T Consensus         7 P~~-v~~~~G~~V~l~C~f~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~   85 (118)
T d1qfoa_           7 PKN-VQGLSGSCLLIPCIFSYPADVPVSNGITAIWYYDYSGKRQVVIHSGDPKLVDKRFRGRAELMGNMDHKVCNLLLKD   85 (118)
T ss_dssp             CSE-EEEETTSCEEECCEEECCTTSCC--CCEEEEEESTTTTCEEEEESSCGGGSCTTTTTTEEECSCGGGTBCCEEECS
T ss_pred             CCE-EEEecCCcEEEEEEEeeccCCCCcceEEEEEEeeceeccceeeeeccccccccccCCCeEEEEeCcCCEEEEEECC
Confidence            444 99999999999999862   11   1245677742110   0           11233332      345799999


Q ss_pred             e--cCCeEEEEEEEec
Q psy8771         165 V--TESENYTCIAASV  178 (904)
Q Consensus       165 l--~d~g~Y~c~a~n~  178 (904)
                      |  +|+|.|.|++...
T Consensus        86 v~~~DsG~Y~C~v~~~  101 (118)
T d1qfoa_          86 LKPEDSGTYNFRFEIS  101 (118)
T ss_dssp             CCGGGCEEEEEEEECC
T ss_pred             CChhHCEEEEEEEEeC
Confidence            9  6999999999654

>d1ncwl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]

Probab=96.51  E-value=0.0053  Score=49.15  Aligned_cols=68  Identities=19%  Similarity=0.386  Sum_probs=44.8

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCC-----CCeEEEeeCC-cccc----------C--CCCceee----cceEEEEeee
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSP-----MPFVKWRKGQ-NIEL----------T--PDDKLPV----GRNVLTLDRV  165 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p-----~p~i~W~k~~-~~~~----------~--~~~~~~~----~~~~l~i~~l  165 (904)
                      ++.|.. +.+.+|+.++|.|.+.+..     ...+.|++.. |..+          .  ...++..    .+..|.|.++
T Consensus         5 TQsP~s-ls~~~G~svtl~C~~s~~~~~~~~~~~~~WYrQ~pg~~~~~l~~~~~~~~~g~~~~fs~~~~~~~~~L~I~~~   83 (112)
T d1ncwl1           5 TQSPKT-ISVTIGQPASISCKSSQRLLNSNGKTFLNWLLQRPGQSPKRLIYLGTKLDSGVPDRFTGSGSGTDFTLKISRV   83 (112)
T ss_dssp             EEECSE-EEEETTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred             eCcCCE-EEECCCCCEEEEEEECcccccCCCCcccEEEEcCCCCceEEEEeccCcCCCCcCceEEeeCCCCEEEEEECcc
Confidence            344444 8999999999999987543     2458999731 2111          0  1123332    3447999999


Q ss_pred             --cCCeEEEEEEE
Q psy8771         166 --TESENYTCIAA  176 (904)
Q Consensus       166 --~d~g~Y~c~a~  176 (904)
                        +|++.|.|...
T Consensus        84 ~~eDsAvYYC~~~   96 (112)
T d1ncwl1          84 EAEDLGVYYCWQG   96 (112)
T ss_dssp             CGGGCEEEEEEEC
T ss_pred             ccCcCEeEEEEcC
Confidence              79999999543

>d1de4a1 b.1.1.2 (A:182-275) Hemochromatosis protein Hfe, alpha-3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Hemochromatosis protein Hfe, alpha-3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0051  Score=47.26  Aligned_cols=71  Identities=28%  Similarity=0.435  Sum_probs=44.8

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCC-----CceeecceEEEEee---e--cCCe
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPD-----DKLPVGRNVLTLDR---V--TESE  169 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~-----~~~~~~~~~l~i~~---l--~d~g  169 (904)
                      ++||.+..     .....++.++|.|.+.| .|. ..|+|.+| |..+...     .....+++++.+..   +  .++.
T Consensus         2 ~vpP~V~v-----~~~~~~~~~tL~C~~~gFyP~~i~v~W~~d-g~~~~~~~~~~~~~~~~~~~t~~~~s~l~v~~~~~~   75 (94)
T d1de4a1           2 QVPPLVKV-----THHVTSSVTTLRCRALNYYPQNITMKWLKD-KQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQ   75 (94)
T ss_dssp             CBCCEEEE-----EEEECSSCEEEEEEEEEEBSSCCEEEEEET-TEECCGGGSCCCEEEECTTSCEEEEEEEEECTTCGG
T ss_pred             CCCCEEEE-----EEcCCCCCEEEEEEEeeEECCCCEEEEEEC-CEECccCcccccceEeCCCceEEEEEEEEECCCCCC
Confidence            45777653     23345678999999999 575 58999999 6555322     12223444443332   2  4667


Q ss_pred             EEEEEEEec
Q psy8771         170 NYTCIAASV  178 (904)
Q Consensus       170 ~Y~c~a~n~  178 (904)
                      .|+|.+...
T Consensus        76 ~ytC~V~H~   84 (94)
T d1de4a1          76 RYTCQVEHP   84 (94)
T ss_dssp             GEEEEEECT
T ss_pred             EEEEEEEeC
Confidence            899999764

>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: N-terminal domain of sialic acid binding Ig-like lectin 7 (SIGLEC-7, p75/AIRM1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.0037  Score=51.33  Aligned_cols=63  Identities=11%  Similarity=0.137  Sum_probs=42.3

Q ss_pred             eEEecCCCeEEEEEEccC----C---CCeEEEeeCCcccc--------------C--CCCceee------cceEEEEeee
Q psy8771         115 LEVMLDSPLNLSCVAVGS----P---MPFVKWRKGQNIEL--------------T--PDDKLPV------GRNVLTLDRV  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~----p---~p~i~W~k~~~~~~--------------~--~~~~~~~------~~~~l~i~~l  165 (904)
                      +++.+|+.++|.|.....    .   ...+.|++......              .  ...|+.+      ++.+|.|.+|
T Consensus        11 vtv~~G~~V~ipC~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v   90 (121)
T d2g5ra1          11 VTVQEGMCVHVRCSFSYPVDSQTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDA   90 (121)
T ss_dssp             EEECTTCCEEECCEEECC--CTTTTSCCEEEEEECC-----CCCSEESCTTSCCCTTTTTTEEECSCGGGTBCCEEECSC
T ss_pred             EEEccCCcEEEEEEEeCCCCCCcccccEEEEeeEecCCCceEEEEeeCCCCceeccccceEEEEeeeCcCCEEEEEECCC
Confidence            999999999999998521    1   13578988522110              0  0123432      2447999999


Q ss_pred             --cCCeEEEEEEEe
Q psy8771         166 --TESENYTCIAAS  177 (904)
Q Consensus       166 --~d~g~Y~c~a~n  177 (904)
                        +|+|.|.|++..
T Consensus        91 ~~~DsG~Y~C~v~~  104 (121)
T d2g5ra1          91 RMSDAGRYFFRMEK  104 (121)
T ss_dssp             CGGGCEEEEEEEEE
T ss_pred             ChHHCEEEEEEEEe
Confidence              799999999865

>d1lgva1 b.1.1.1 (A:1-112) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 4 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Human (Homo sapiens), cluster 4 [TaxId: 9606]

Probab=96.46  E-value=0.0055  Score=49.22  Aligned_cols=68  Identities=18%  Similarity=0.345  Sum_probs=45.8

Q ss_pred             CCCceEEecCCCeEEEEEEccCC---CCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cCC
Q psy8771         111 PPALLEVMLDSPLNLSCVAVGSP---MPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TES  168 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~~g~p---~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d~  168 (904)
                      |.. +.+.+|++++|.|...+..   ...+.|++.. +..+            ....++..    .+..|.|.+|  +|+
T Consensus         7 P~s-~~~~~G~svtl~C~~~~~~~~~~~~i~WYrQ~pg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Ds   85 (112)
T d1lgva1           7 PAS-VSGSPGQSITVSCTGVSSIVGSYNLVSWYQQHPGKAPKLLTYEVNKRPSGVSDRFSGSKSGNSASLTISGLQAEDE   85 (112)
T ss_dssp             CSE-EEECTTCCEEEEEECCCCSSSCCCCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred             CCc-EEECCCCCEEEEEEeCCCCCCCCCcceeeeeeecccceeeeeeeccccCCCcccEEEECCCCEeeEEeCcCccccC
Confidence            344 8999999999999988753   3458999831 2111            01122221    3457999999  699


Q ss_pred             eEEEEEEEecC
Q psy8771         169 ENYTCIAASVL  179 (904)
Q Consensus       169 g~Y~c~a~n~~  179 (904)
                      +.|.|.+....
T Consensus        86 a~YyCa~~~~~   96 (112)
T d1lgva1          86 ADYYCSSYDGS   96 (112)
T ss_dssp             EEEEEEEECSS
T ss_pred             EEEEEeeecCC
Confidence            99999876533

>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0073  Score=47.50  Aligned_cols=42  Identities=10%  Similarity=0.033  Sum_probs=33.0

Q ss_pred             ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEec
Q psy8771         248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT  289 (904)
Q Consensus       248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t  289 (904)
                      .......|.|.++...+.+.|+|.|.|..|....+..+.+..
T Consensus        51 ~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~   92 (101)
T d2cqva1          51 NSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVD   92 (101)
T ss_dssp             ECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEEC
T ss_pred             EecceeEEEEeeCCcccCEEEEEEEEECCCEEEEEEEEEEEe
Confidence            334456799999999999999999999999876555555543

>d1hxmb1 b.1.1.1 (B:1-123) T-cell antigen receptor {Human (Homo sapiens), delta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), delta-chain [TaxId: 9606]

Probab=96.45  E-value=0.0087  Score=48.79  Aligned_cols=70  Identities=24%  Similarity=0.435  Sum_probs=46.9

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeCC-cc--c-c---C-----------CCCceeec------ceEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NI--E-L---T-----------PDDKLPVG------RNVL  160 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~--~-~---~-----------~~~~~~~~------~~~l  160 (904)
                      +.+++.. +++.+|+.++|.|.+.|..  ...+.|++-. +.  . +   .           ...|+.+.      ...|
T Consensus         4 l~Qp~~s-~t~~~g~t~~LsC~~sg~~~s~~~~~WYrQ~pg~~~~~l~~~~~~~~~~~~~~~~~~rf~~~~~~~~~~~~L   82 (123)
T d1hxmb1           4 LEQPQIS-STKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTL   82 (123)
T ss_dssp             EECCCSE-EEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEE
T ss_pred             eECCCCe-EEeCCCCCEEEEEEEcCCCcccCeEEEEEECCCCCceEeeecccccccccccccccceeEEeeeccccceee
Confidence            4444445 8889999999999999864  3568999821 11  1 1   0           12344431      2369


Q ss_pred             EEeee--cCCeEEEEEEEe
Q psy8771         161 TLDRV--TESENYTCIAAS  177 (904)
Q Consensus       161 ~i~~l--~d~g~Y~c~a~n  177 (904)
                      .|.+|  +|++.|.|.+..
T Consensus        83 ~i~~l~~~Dsa~YyCA~~~  101 (123)
T d1hxmb1          83 TIHNVEKQDIATYYCALWE  101 (123)
T ss_dssp             EECSCCGGGCEEEEEEEEE
T ss_pred             cccccccccCcEEEEeeeC
Confidence            99999  799999997653

>d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=96.44  E-value=0.0059  Score=48.71  Aligned_cols=80  Identities=19%  Similarity=0.263  Sum_probs=47.4

Q ss_pred             CCcceEEEee--ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEE------------ecccceEEEeCCCCCcEE
Q psy8771         623 KPRDLRAVDI--QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRR------------IGLVETYSLTGLYPNTLY  688 (904)
Q Consensus       623 ~p~~l~~~~~--~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~------------~~~~~~~~l~~L~p~t~Y  688 (904)
                      +|..++++.-  ..+++.|+|......+.    -.|+|....+.......            ......++|.||+|++.|
T Consensus        18 ~P~qvhlt~~~~~~tsm~VsW~T~~~~~~----~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~T~Y   93 (112)
T d2qfra1          18 APQQVHITQGDLVGRAMIISWVTMDEPGS----SAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY   93 (112)
T ss_dssp             CCEEEEEEECSSSSSCEEEEEEESSSCCC----CEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred             CCccEEEeCcCCCCCEEEEEEECCCCCCC----cEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCCCEE
Confidence            3444444433  24789999966433222    34555554433221110            011246899999999999


Q ss_pred             EEEEEEEcCCCCCCCCCCeeEEec
Q psy8771         689 YIWLAAQSPRGEGATTPPIPVRTK  712 (904)
Q Consensus       689 ~v~V~a~~~~G~~~~s~~~~~~t~  712 (904)
                      .++|      |.+.+|....|+|.
T Consensus        94 ~YrV------G~~~~S~~~~F~T~  111 (112)
T d2qfra1          94 YYEV------GLRNTTRRFSFITP  111 (112)
T ss_dssp             EEEE------CCSSSCEEEEEECC
T ss_pred             EEEE------CCCCceeeEEEEcC
Confidence            9998      33346777888884

>d1fnga1 b.1.1.2 (A:82-182) Class II MHC alpha chain, C-terminal domain {Mouse (Mus musculus), I-E group [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Class II MHC alpha chain, C-terminal domain
species: Mouse (Mus musculus), I-E group [TaxId: 10090]

Probab=96.41  E-value=0.0039  Score=48.76  Aligned_cols=73  Identities=21%  Similarity=0.313  Sum_probs=45.8

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCC----ceeecceEEEEeee-----cCCeE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDD----KLPVGRNVLTLDRV-----TESEN  170 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~----~~~~~~~~l~i~~l-----~d~g~  170 (904)
                      ..||.+...+..  ....|+.++|.|.+.|. |. ..|+|.+| |..+..+.    -...+++++.+...     .++..
T Consensus         3 ~v~P~V~v~~~~--~~~~~~~~tL~C~v~gF~P~~i~v~W~~n-g~~~~~~~~~~~~~~~~dgty~~~S~L~v~~~~~~~   79 (101)
T d1fnga1           3 NVAPEVTVLSRS--PVNLGEPNILICFIDKFSPPVVNVTWLRN-GRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDF   79 (101)
T ss_dssp             CBCCEEEEEESS--CCCTTSCEEEEEEEEEEBSSCCEEEEEET-TEEECSSEEECCCEECSSSCEEEEEEEEECCCTTCC
T ss_pred             CcCCeEEEeCCC--cccCCCCEEEEEEEEeEECCCCEEEEEEC-CeecCCCcEeCeEEECCCCcEEEEEEeEEcCCCCCE
Confidence            456766554332  13467889999999995 54 58999999 66664431    12234444444332     46678


Q ss_pred             EEEEEEe
Q psy8771         171 YTCIAAS  177 (904)
Q Consensus       171 Y~c~a~n  177 (904)
                      |+|.+..
T Consensus        80 ytC~V~H   86 (101)
T d1fnga1          80 YDCEVDH   86 (101)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEEE
Confidence            9998865

>d1hxma1 b.1.1.1 (A:1-120) T-cell antigen receptor {Human (Homo sapiens), gamma-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), gamma-chain [TaxId: 9606]

Probab=96.34  E-value=0.0089  Score=48.53  Aligned_cols=68  Identities=16%  Similarity=0.364  Sum_probs=46.1

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeC---Cccc-c---------CCCCceee------cceEEEEeee--
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKG---QNIE-L---------TPDDKLPV------GRNVLTLDRV--  165 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~---~~~~-~---------~~~~~~~~------~~~~l~i~~l--  165 (904)
                      ..+.. +.+.+|++++|.|...|..  ...+.|++-   ++.. +         ....|+..      +...|.|.++  
T Consensus         6 ~~~~s-v~v~~G~~vtL~C~~s~~~~~~~~~~WyrQ~pg~~~~~l~~~~~~~~~~~~~r~~~s~~~~~~~~~L~i~~~~~   84 (120)
T d1hxma1           6 PEHQT-VPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSE   84 (120)
T ss_dssp             ESCSE-EEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCG
T ss_pred             ccCCC-EEECCCCCEEEEEEEeccCccCCcCeEEEccccccceeeeccccceeecccccceeeccccccceecccccccc
Confidence            33444 8899999999999998765  357999972   1111 1         01134432      2347999998  


Q ss_pred             cCCeEEEEEEEe
Q psy8771         166 TESENYTCIAAS  177 (904)
Q Consensus       166 ~d~g~Y~c~a~n  177 (904)
                      +|+|.|.|....
T Consensus        85 ~Dsa~YyCA~~~   96 (120)
T d1hxma1          85 RDEGSYYCACDT   96 (120)
T ss_dssp             GGCEEEEEEEEC
T ss_pred             cCCceeecCccc
Confidence            799999997654

>d1cd0a_ b.1.1.1 (A:) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=96.32  E-value=0.0068  Score=48.59  Aligned_cols=63  Identities=14%  Similarity=0.363  Sum_probs=43.7

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cccc------------CCCCceee------cceEEEEeee--cCCeEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NIEL------------TPDDKLPV------GRNVLTLDRV--TESENY  171 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~~~------------~~~~~~~~------~~~~l~i~~l--~d~g~Y  171 (904)
                      +++.+|++++|.|...|...  ..+.|++-. +..+            ....|+..      ....|.|.+|  +|++.|
T Consensus        10 ~sv~~G~svtL~C~~s~~~~~~~~i~WyrQ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~l~~~Dsa~Y   89 (111)
T d1cd0a_          10 VSESPGKTVTISCTRSSGNIDSNYVQWYQQRPGSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADY   89 (111)
T ss_dssp             EEECTTSCEEEEEEESSSCGGGSCCEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred             eEECCCCCEEEEEEECCCCccCceEEEeeeccCceeEeeeccccccCcccCCceeEeecCCCCccccccccCCcccCcEE
Confidence            89999999999999987643  458999832 1111            01123322      2348999999  699999


Q ss_pred             EEEEEe
Q psy8771         172 TCIAAS  177 (904)
Q Consensus       172 ~c~a~n  177 (904)
                      .|.+..
T Consensus        90 yCA~~~   95 (111)
T d1cd0a_          90 YCQSYD   95 (111)
T ss_dssp             EEEEEE
T ss_pred             EEeecc
Confidence            998654

>d1rzfl1 b.1.1.1 (L:2-108) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 2 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Human (Homo sapiens), cluster 2 [TaxId: 9606]

Probab=96.30  E-value=0.0099  Score=47.55  Aligned_cols=63  Identities=14%  Similarity=0.240  Sum_probs=43.8

Q ss_pred             eEEecCCCeEEEEEEccCC--CCeEEEeeCC-ccc---c---------CCCCceee----cceEEEEeee--cCCeEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NIE---L---------TPDDKLPV----GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~~---~---------~~~~~~~~----~~~~l~i~~l--~d~g~Y~c  173 (904)
                      +.+.+|++++|.|...+..  ...|.|++-. +..   +         ....|+..    ....|.|.++  +|++.|.|
T Consensus        10 ~~v~~G~svtl~C~~s~~~~~~~~~~WYrq~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~~~~~Dsa~YyC   89 (111)
T d1rzfl1          10 VSAAPGQKVTISCSGSSSNIGNNDVSWYQQFPGTVPKLVIYENNERPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC   89 (111)
T ss_dssp             EEECTTSCEEEEEECCCCCCCTSCEEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEE
T ss_pred             eEeCCCCCEEEEEEECCcCCcCCcccceeeecccceEEEeeecCCCccccccceeeeCCCCEeeeEEeeeccccCcceEE
Confidence            8999999999999987654  3469999731 111   1         01123332    2358999999  79999999


Q ss_pred             EEEe
Q psy8771         174 IAAS  177 (904)
Q Consensus       174 ~a~n  177 (904)
                      .+..
T Consensus        90 A~~~   93 (111)
T d1rzfl1          90 GTWD   93 (111)
T ss_dssp             EEEE
T ss_pred             eecC
Confidence            8764

>d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Sweet potato (Ipomoea batatas) [TaxId: 4120]

Probab=96.30  E-value=0.0063  Score=49.18  Aligned_cols=81  Identities=15%  Similarity=0.304  Sum_probs=47.8

Q ss_pred             CCcceEEEee--ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEE------------ecccceEEEeCCCCCcEE
Q psy8771         623 KPRDLRAVDI--QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRR------------IGLVETYSLTGLYPNTLY  688 (904)
Q Consensus       623 ~p~~l~~~~~--~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~------------~~~~~~~~l~~L~p~t~Y  688 (904)
                      +|..+++...  ..+++.|+|.......+.   -.|+|....+.......            ..-..+++|.||+|++.|
T Consensus        24 ~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~---~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T~Y  100 (119)
T d1xzwa1          24 APQQVHITQGDYEGRGVIISWTTPYDKAGA---NKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKY  100 (119)
T ss_dssp             CCEEEEEEECSSSSSCEEEEEEESSCCTTT---TEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEE
T ss_pred             CCCEEEEEecCCCCCEEEEEEECCCCCCCC---CEEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCCEE
Confidence            3444444433  357899999864322111   25667665443321111            111246899999999999


Q ss_pred             EEEEEEEcCCCCCCCCCCeeEEec
Q psy8771         689 YIWLAAQSPRGEGATTPPIPVRTK  712 (904)
Q Consensus       689 ~v~V~a~~~~G~~~~s~~~~~~t~  712 (904)
                      .++|-      .+.+|....|+|.
T Consensus       101 ~YrVG------~~~~S~~~~F~T~  118 (119)
T d1xzwa1         101 YYRLG------FGDAKRQFWFVTP  118 (119)
T ss_dssp             EEEEC------CGGGCEEEEEECC
T ss_pred             EEEEC------CCCccceEEEeCC
Confidence            99983      2335767788875

>d1w72l1 b.1.1.1 (L:1-107) Immunoglobulin light chain lambda variable domain, VL-lambda {Human (Homo sapiens), cluster 5 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Human (Homo sapiens), cluster 5 [TaxId: 9606]

Probab=96.29  E-value=0.0099  Score=47.14  Aligned_cols=64  Identities=16%  Similarity=0.289  Sum_probs=44.4

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---c---------CCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---L---------TPDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---~---------~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      +.+.+|++++|.|.........+.|++.. +..   +         ....++..    ....|.|.+|  +|++.|-|.+
T Consensus        10 l~~~~G~svtl~C~~~~~~~~~i~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~DsavYyCA~   89 (109)
T d1w72l1          10 VSVAPGQTARITCGGNNIGSRSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNMATLTISRVEAGDEADYYCQV   89 (109)
T ss_dssp             EEECTTSCEEEEEECTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred             EEECCCCCEEEEEEcCCCCCcceeeeeccccceeEEEEEccccCCCceeeeEeeecCCCccceEEeeeccCCCEEEEEEe
Confidence            88899999999999876656679999731 211   1         00122222    2447999999  7999999987


Q ss_pred             Eec
Q psy8771         176 ASV  178 (904)
Q Consensus       176 ~n~  178 (904)
                      ...
T Consensus        90 ~~~   92 (109)
T d1w72l1          90 WDS   92 (109)
T ss_dssp             EET
T ss_pred             cCC
Confidence            643

>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Class II MHC beta chain, C-terminal domain
species: Human (Homo sapiens), HLA-DM [TaxId: 9606]

Probab=96.28  E-value=0.0044  Score=48.08  Aligned_cols=60  Identities=22%  Similarity=0.429  Sum_probs=40.0

Q ss_pred             ecCCCeEEEEEEccC-C-CCeEEEeeCCccccCCCCc----eeecceEEEEee-e----cCCeEEEEEEEec
Q psy8771         118 MLDSPLNLSCVAVGS-P-MPFVKWRKGQNIELTPDDK----LPVGRNVLTLDR-V----TESENYTCIAASV  178 (904)
Q Consensus       118 ~~g~~~~l~C~~~g~-p-~p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~-l----~d~g~Y~c~a~n~  178 (904)
                      ..++.++|.|.+.|. | ...|+|.+| |..+..+..    ....++++.+.. |    +++..|+|.+...
T Consensus        15 ~~~~~~tL~C~~~gFyP~~i~v~W~~n-g~~~~~~~~~~~~~~~~dgty~~~s~L~v~~~~~~~ytC~V~H~   85 (98)
T d1hdmb1          15 NTREPVMLACYVWGFYPAEVTITWRKN-GKLVMHSSAHKTAQPNGDWTYQTLSHLALTPSYGDTYTCVVEHI   85 (98)
T ss_dssp             SSSCSEEEEEEEEEEBSSCCEEEEEET-TEECCCCCSBCCCEECSSSCEEEEEEEEECCCTTCCEEEEEECT
T ss_pred             cCCCcEEEEEEEEEEECCCCEEEEEEC-CEeccCCeEeCceEECCCCCEEEEEEeEcCCCCCCEEEEEEEeC
Confidence            456889999999995 5 468999999 665543321    223455544433 2    4667899998753

>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal domain {Human (Homo sapiens), HLA-DQ group [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Class II MHC alpha chain, C-terminal domain
species: Human (Homo sapiens), HLA-DQ group [TaxId: 9606]

Probab=96.26  E-value=0.0056  Score=47.62  Aligned_cols=73  Identities=18%  Similarity=0.285  Sum_probs=46.1

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCCc----eeecceEEEEeee-----cCCeE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDK----LPVGRNVLTLDRV-----TESEN  170 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~l-----~d~g~  170 (904)
                      ..+|.+..-+..  ....|+..+|.|.+.|. |. ..|+|.+| |..+..+..    ....++++.+...     +++..
T Consensus         3 ~~~P~V~v~~~~--~~~~~~~~tL~C~~~gFyP~~i~v~W~~n-g~~~~~~~~~~~~~~~~dgtf~~~s~l~v~~~~~~~   79 (99)
T d1uvqa1           3 NEVPEVTVFSKS--PVTLGQPNTLICLVDNIFPPVVNITWLSN-GQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEI   79 (99)
T ss_dssp             CCCCEEEEEESS--CCCTTSCEEEEEEEEEECSSCCEEEEEET-TEEECTTEEECCCEECTTSCEEEEEEEEECCCTTCC
T ss_pred             CcCCEEEEEcCC--cccCCCcEEEEEEEEEEECCCCEEEEEEC-CEeccCCcEecceEECCCCCEEEEEEEEEcCCCCCE
Confidence            456665543321  23467889999999995 54 57999999 666654321    2234555444332     46778


Q ss_pred             EEEEEEe
Q psy8771         171 YTCIAAS  177 (904)
Q Consensus       171 Y~c~a~n  177 (904)
                      |+|++..
T Consensus        80 ytC~V~H   86 (99)
T d1uvqa1          80 YDCKVEH   86 (99)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEEe
Confidence            9999875

>d1d5mb1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal domain {Human (Homo sapiens), HLA-DR group [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Class II MHC beta chain, C-terminal domain
species: Human (Homo sapiens), HLA-DR group [TaxId: 9606]

Probab=96.25  E-value=0.0067  Score=47.11  Aligned_cols=73  Identities=23%  Similarity=0.301  Sum_probs=41.1

Q ss_pred             CCCCeEEcCCCCceEEecCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCC----ceeecceEEEEeee-----cCCeE
Q psy8771         102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDD----KLPVGRNVLTLDRV-----TESEN  170 (904)
Q Consensus       102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~----~~~~~~~~l~i~~l-----~d~g~  170 (904)
                      +++|++..-+..  ....++..+|.|.+.|. |. ..|+|.+| |..+..+.    ....+++++.+...     +++..
T Consensus         2 ~V~P~V~l~~~~--~~~~~~~~tL~C~v~~F~P~~i~v~W~~~-g~~~~~~~~~~~~~~~~dgtf~~~s~l~~~~~~~~~   78 (98)
T d1d5mb1           2 RVYPEVTVYPAK--TQPLQHHNLLVCSVNGFYPGSIEVRWFRN-GQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSGEV   78 (98)
T ss_dssp             CBCCEEEEEEC----------CEEEEEEEEEBSSCCEEEEEET-TEECCSSEEECCCEECSSSCEEEEEEEECCCCTTCE
T ss_pred             cCCCEEEEECCC--ccccCCceEEEEEEeeeECCCcEEEEEEC-CEEcCCCCEECeEEeCCCcEEEEEEEeeEcCCCCCE
Confidence            345665543332  22346778899999994 54 47999999 65554331    22334555444332     57788


Q ss_pred             EEEEEEe
Q psy8771         171 YTCIAAS  177 (904)
Q Consensus       171 Y~c~a~n  177 (904)
                      |+|.+..
T Consensus        79 ytC~V~H   85 (98)
T d1d5mb1          79 YTCQVEH   85 (98)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEEE
Confidence            9999875

>d1kgcd1 b.1.1.1 (D:2-117) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=96.24  E-value=0.0056  Score=49.20  Aligned_cols=63  Identities=19%  Similarity=0.380  Sum_probs=42.9

Q ss_pred             eEEecCCCeEEEEEEccCCC-CeEEEeeCC-ccccC------------CCCceee----cceEEEEeee--cCCeEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM-PFVKWRKGQ-NIELT------------PDDKLPV----GRNVLTLDRV--TESENYTCI  174 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~-p~i~W~k~~-~~~~~------------~~~~~~~----~~~~l~i~~l--~d~g~Y~c~  174 (904)
                      +.+.+|++++|.|...+... ..|.|++-. |..+.            ...++.+    ....|.|.++  +|+|.|.|.
T Consensus         8 ~~~~~G~svtl~C~~s~~~~~~~~~WYrQ~pg~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~Dsa~YyCa   87 (112)
T d1kgcd1           8 MESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAVYYCI   87 (112)
T ss_dssp             EEEETTSCEEEEEEESCCCTTCCEEEEEECTTSCCEEEEEESSSSEECSSEEEEECTTSSEEEEEESSCCGGGCEEEEEE
T ss_pred             EEECCCCCEEEEEEEeCCCccccEEEEEECCCCCcceeeeecceeccccccceeecccCCeeEEEEeecccccceeEeee
Confidence            88999999999999887554 569999821 21110            0012222    2347999998  799999997


Q ss_pred             EEe
Q psy8771         175 AAS  177 (904)
Q Consensus       175 a~n  177 (904)
                      +..
T Consensus        88 ~~~   90 (112)
T d1kgcd1          88 LPL   90 (112)
T ss_dssp             CCC
T ss_pred             Eec
Confidence            653

>d2aq2a1 b.1.1.1 (A:1-117) T-cell antigen receptor {Mouse (Mus musculus), beta-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), beta-chain [TaxId: 10090]

Probab=96.24  E-value=0.0091  Score=47.70  Aligned_cols=69  Identities=14%  Similarity=0.261  Sum_probs=45.8

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-c-cc--c----CCC--------Ccee-----ecceEEEEeee
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-N-IE--L----TPD--------DKLP-----VGRNVLTLDRV  165 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~-~~--~----~~~--------~~~~-----~~~~~l~i~~l  165 (904)
                      +.+.|.. +.+.+|+.++|.|...+. ...+.|+|-. | .+  +    ..+        .++.     .....|.|.++
T Consensus         4 V~Q~P~~-~~~~~G~~vtl~C~~s~~-~~~~~WYrQ~~g~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~   81 (110)
T d2aq2a1           4 VTQSPRN-KVAVTGEKVTLSCQQTNN-HNNMYWYRQDTGHGLRLIHYSYGVGNTEKGDIPDGYEASRPSQEQFSLILESA   81 (110)
T ss_dssp             EEEECSE-EEECTTCCEEEEEEESSC-CSEEEEEEECTTSCEEEEEEESSTTCCEECSCCTTCEEEEEETTEEEEEESSC
T ss_pred             EEEeCCe-EEEcCCCCEEEEEEECCC-cCcEEEEEEcccCCceEEEEEeecCCcccCCCCCCEEEEeccCCEEEEEECCC
Confidence            4455555 889999999999998753 5679999821 1 11  0    000        1111     12457889999


Q ss_pred             --cCCeEEEEEEEe
Q psy8771         166 --TESENYTCIAAS  177 (904)
Q Consensus       166 --~d~g~Y~c~a~n  177 (904)
                        +|+|.|.|.+..
T Consensus        82 ~~~Dsa~YyCa~~~   95 (110)
T d2aq2a1          82 TPSQTSVYFCASGG   95 (110)
T ss_dssp             CGGGCEEEEEEEEE
T ss_pred             CHhhCEEEEEeeCC
Confidence              699999997653

>d2gj6d1 b.1.1.1 (D:15-114) T-cell antigen receptor {Mouse (Mus musculus), beta-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), beta-chain [TaxId: 10090]

Probab=96.21  E-value=0.0049  Score=47.68  Aligned_cols=58  Identities=14%  Similarity=0.279  Sum_probs=40.4

Q ss_pred             CCCeEEEEEEccCCCCeEEEeeCC-ccc---c---CC-----CCceee------cceEEEEeee--cCCeEEEEEEEe
Q psy8771         120 DSPLNLSCVAVGSPMPFVKWRKGQ-NIE---L---TP-----DDKLPV------GRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       120 g~~~~l~C~~~g~p~p~i~W~k~~-~~~---~---~~-----~~~~~~------~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      |++++|.|...+.....+.|+|-. +..   +   ..     ..|+..      ...+|.|.++  +|+|.|.|.+..
T Consensus         1 G~~vtl~C~~~~~~~~~~~Wyrq~~g~~p~~l~~~~~~~~~~~~rf~~~~~~~~~~~sL~I~~~~~~Dsg~YyCa~~~   78 (94)
T d2gj6d1           1 GAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMSIYSNGDKEDGRFTAQLNKASQYVSLLIRDSQPSDSATYLCAVTT   78 (94)
T ss_dssp             TSCEEEEEEECCTTCCEEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEES
T ss_pred             CccEEEEEEEccccCCcEEEEEECCCcccccceeeeeeccCCCCcEEEEecCCCCEEeEEeeccccCcCccceeeEec
Confidence            789999999988888889999821 211   1   11     123322      1347999999  799999998764

>d1n4xl_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]

Probab=96.21  E-value=0.008  Score=48.18  Aligned_cols=69  Identities=19%  Similarity=0.354  Sum_probs=46.0

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCC-----CeEEEeeCC-cccc------------CCCCceee----cceEEEEee
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPM-----PFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDR  164 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~-----p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~  164 (904)
                      +++.|.. +.+.+|+.++|.|...+...     ..+.|++-. |...            ....++..    ....|.|.+
T Consensus         5 ltQ~P~s-~~~~~G~svtl~C~~s~~~~~~~~~~~~~WYrQ~~g~~p~~l~~~~~~~~~~~~~~fs~~~~~~~~~L~I~~   83 (113)
T d1n4xl_           5 MTQTPLY-LPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR   83 (113)
T ss_dssp             EEEECSE-EEECTTCCEEEEEEESSCCCCTTSCCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEECSSEEEEEESS
T ss_pred             EeCcCCE-EEECCCCCEEEEEEeccccccCCCceEeEEEecCCCCccEEEEEecCCCccccCCCeeeeccCCcccCccCC
Confidence            3444555 89999999999999876432     468999832 2111            01123332    235899999


Q ss_pred             e--cCCeEEEEEEE
Q psy8771         165 V--TESENYTCIAA  176 (904)
Q Consensus       165 l--~d~g~Y~c~a~  176 (904)
                      +  +|++.|.|...
T Consensus        84 ~~~~DsavYyCa~~   97 (113)
T d1n4xl_          84 VEAEDLGIYYCFQG   97 (113)
T ss_dssp             CCGGGCEEEEEEEC
T ss_pred             CCcccCEEEEEEEC
Confidence            9  79999999644

>d2esve1 b.1.1.1 (E:3-118) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=96.18  E-value=0.017  Score=46.14  Aligned_cols=66  Identities=15%  Similarity=0.339  Sum_probs=43.7

Q ss_pred             CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cc--c-c-------------CCCCceee-----cceEEEEeee--
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NI--E-L-------------TPDDKLPV-----GRNVLTLDRV--  165 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~--~-~-------------~~~~~~~~-----~~~~l~i~~l--  165 (904)
                      .|.. +.+.+|++++|.|...+. ...+.|++-. |.  . +             ....++..     ....|.|.++  
T Consensus         5 ~P~~-~~~~~G~svtl~C~~~~~-~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~L~i~~~~~   82 (111)
T d2esve1           5 FPSH-SVIEKGQTVTLRCDPISG-HDNLYWYRRVMGKEIKFLLHFVKESKQDESGMPNNRFLAERTGGTYSTLKVQPAEL   82 (111)
T ss_dssp             ECSE-EEEETTCCEEEEEECCTT-CSEEEEEEEETTSCEEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEESSCCG
T ss_pred             CCCE-EEECCCCCEEEEEEECCC-CceEEEEEEccCCcceecceecccCcccccCCCCccEEEEcCCCCEEEEEECCccc
Confidence            3444 889999999999986543 4578999731 11  1 1             01122322     1247999999  


Q ss_pred             cCCeEEEEEEEe
Q psy8771         166 TESENYTCIAAS  177 (904)
Q Consensus       166 ~d~g~Y~c~a~n  177 (904)
                      +|+|.|.|.+..
T Consensus        83 ~Dsa~YyCa~~~   94 (111)
T d2esve1          83 EDSGVYFCASSQ   94 (111)
T ss_dssp             GGCEEEEEEEES
T ss_pred             CCCceEEEeeeC
Confidence            799999998654

>d1oaql_ b.1.1.1 (L:) Immunoglobulin light chain lambda variable domain, VL-lambda {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.17  E-value=0.0071  Score=48.10  Aligned_cols=63  Identities=14%  Similarity=0.324  Sum_probs=43.2

Q ss_pred             eEEecCCCeEEEEEEccCCC---CeEEEeeC--Cccc--c---------CCCCceee----cceEEEEeee--cCCeEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM---PFVKWRKG--QNIE--L---------TPDDKLPV----GRNVLTLDRV--TESENYT  172 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~---p~i~W~k~--~~~~--~---------~~~~~~~~----~~~~l~i~~l--~d~g~Y~  172 (904)
                      +.+.+|+.++|.|...+...   ..|.|++-  +..+  +         ....|+..    ++..|.|.++  +|+|.|.
T Consensus        10 lsvs~G~tvtl~C~~s~~~~~~~~~v~WyrQ~pg~~p~~l~y~~~~~~~~~~~rf~~s~~~~~~~L~I~~~~~~Dsa~Yy   89 (110)
T d1oaql_          10 LTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYF   89 (110)
T ss_dssp             EEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred             EEeCCCCCEEEEEEEcCCCCcceeeeEEEEeecccceeeeeeeeceeccccceeeeecccccceeeecCCCCccccEeEE
Confidence            88999999999999986433   23889972  1111  1         01133332    3457999999  7999999


Q ss_pred             EEEEe
Q psy8771         173 CIAAS  177 (904)
Q Consensus       173 c~a~n  177 (904)
                      |.+..
T Consensus        90 Ca~~~   94 (110)
T d1oaql_          90 CALWY   94 (110)
T ss_dssp             EEEEE
T ss_pred             EEccc
Confidence            98754

>d1f3rb2 b.1.1.1 (B:139-257) Immunoglobulin light chain kappa variable domain, VL-kappa {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.17  E-value=0.0039  Score=50.55  Aligned_cols=63  Identities=16%  Similarity=0.332  Sum_probs=43.9

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---c---------CCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---L---------TPDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---~---------~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      +.+.+|+.++|.|...+.-...+.|++-. +..   +         ....++..    ....|.|.++  +|++.|.|.+
T Consensus        11 v~~~~G~svtl~C~~s~~~~~~i~WYrQ~pg~~~~~l~~~~~~~~~~~~~~fs~~~~~~~~~L~I~~~~~~DsavYyCa~   90 (119)
T d1f3rb2          11 LSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQ   90 (119)
T ss_dssp             ECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEE
T ss_pred             EEECCCCCEEEEEEeCCCCcceeEEeeeecccccEEEEEeeccccCceeeeecccCCCCEEEEEcccCccCCCeEEEeec
Confidence            78899999999999887666679999831 111   1         01123322    2347999999  6999999976


Q ss_pred             Ee
Q psy8771         176 AS  177 (904)
Q Consensus       176 ~n  177 (904)
                      ..
T Consensus        91 ~~   92 (119)
T d1f3rb2          91 YN   92 (119)
T ss_dssp             ES
T ss_pred             cC
Confidence            53

>d1nfde1 b.1.1.1 (E:2-107) Immunoglobulin light chain lambda variable domain, VL-lambda {Hamster (Cricetulus griseus) [TaxId: 10029]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain lambda variable domain, VL-lambda
species: Hamster (Cricetulus griseus) [TaxId: 10029]

Probab=96.17  E-value=0.0091  Score=47.35  Aligned_cols=63  Identities=16%  Similarity=0.379  Sum_probs=44.0

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCC-cc--c-cC---------CCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NI--E-LT---------PDDKLPV----GRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~--~-~~---------~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      +.+.+|++++|.|.........|.|++-. |.  . +.         ...|+..    ....|.|.+|  +|++.|.|.+
T Consensus         9 ~~~~~G~svtl~C~~~~~~~~~i~WYrQ~~g~~p~~l~y~~~~~~~~~~~rf~~~~~~~~~~L~I~~l~~~Dsa~YyCA~   88 (108)
T d1nfde1           9 ASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCLS   88 (108)
T ss_dssp             EEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEEE
T ss_pred             eEECCCCCEEEEEECCCCCCccEEEEecccccceeeeccccccccccccceeeecCCCCEeeeeEcCccccCCceEEEEe
Confidence            88999999999998876555678999821 21  1 10         0123432    3457999998  7999999987


Q ss_pred             Ee
Q psy8771         176 AS  177 (904)
Q Consensus       176 ~n  177 (904)
                      ..
T Consensus        89 ~~   90 (108)
T d1nfde1          89 SY   90 (108)
T ss_dssp             EE
T ss_pred             ec
Confidence            53

>d3b5ha2 b.1.1.4 (A:23-102) Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cervical EMMPRIN
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.014  Score=41.25  Aligned_cols=58  Identities=26%  Similarity=0.442  Sum_probs=43.7

Q ss_pred             ecCCCeEEEEEEccCCCC--eEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEEEEEe
Q psy8771         118 MLDSPLNLSCVAVGSPMP--FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAAS  177 (904)
Q Consensus       118 ~~g~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c~a~n  177 (904)
                      ..|..+.|+|.....+.+  .-.|.|+ |..+... +.......++|..-+++|+|.|...+
T Consensus        10 ~~~sk~~LtCnLt~s~~~i~ghrW~K~-gkvl~ed-~~~~~~tey~V~~~D~SGeY~CVFl~   69 (80)
T d3b5ha2          10 DLGSKILLTCSLNDSATEVTGHRWLKG-GVVLKED-ALPGQKTEFKVDSDDQWGEYSCVFLP   69 (80)
T ss_dssp             EETTEEEEEEEEESCSSCCCEEEEESS-SEEEECT-TCCCSEEEEEECGGGCCEEEEEEEES
T ss_pred             cCCCCEEEEEECCCCCCceeeeEEeeC-CEEcccc-CCCCCceEEEEecCCCCceEEEEEcC
Confidence            578889999999887654  3579999 7777653 44445567888776799999998653

>d1h5ba_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus), alpha-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), alpha-chain [TaxId: 10090]

Probab=96.16  E-value=0.0059  Score=49.13  Aligned_cols=70  Identities=21%  Similarity=0.346  Sum_probs=45.5

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------CCC----Ccee-------ecceEEEEeee--cC
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------TPD----DKLP-------VGRNVLTLDRV--TE  167 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------~~~----~~~~-------~~~~~l~i~~l--~d  167 (904)
                      ...|.. +.+.+|+.++|.|...+. ...+.|++-. +..+      ...    ....       .....|.|.++  +|
T Consensus         5 ~Q~P~~-~~v~~G~~vtl~C~~~~~-~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D   82 (113)
T d1h5ba_           5 EQSPSA-LSLHEGTDSALRCNFTTT-MRSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLED   82 (113)
T ss_dssp             EEECSE-EEEETTCCEEEEEEESSC-CSEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGG
T ss_pred             EECCCE-EEEcCCCCEEEEEEEecC-CccceEEEeecccceEEEEEeeeeeccccccceEEeecCCceeEEEECCCCHhH
Confidence            334445 899999999999998764 4568999821 1111      000    0000       12347999998  79


Q ss_pred             CeEEEEEEEecC
Q psy8771         168 SENYTCIAASVL  179 (904)
Q Consensus       168 ~g~Y~c~a~n~~  179 (904)
                      +|.|.|.+....
T Consensus        83 sa~YyCa~~~~~   94 (113)
T d1h5ba_          83 SGTYFCAAEASS   94 (113)
T ss_dssp             CEEEEEEEECSS
T ss_pred             CEEEEEEecCCC
Confidence            999999876543

>d1j05a_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin light chain kappa variable domain, VL-kappa
species: Mouse (Mus musculus), cluster 2 [TaxId: 10090]

Probab=96.14  E-value=0.0075  Score=48.25  Aligned_cols=68  Identities=24%  Similarity=0.384  Sum_probs=43.9

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCC----CCeEEEeeCC-ccc---cC---------CCCceee----cceEEEEeee--
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSP----MPFVKWRKGQ-NIE---LT---------PDDKLPV----GRNVLTLDRV--  165 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p----~p~i~W~k~~-~~~---~~---------~~~~~~~----~~~~l~i~~l--  165 (904)
                      +.|.. +.+.+|+.++|.|......    ...+.|++-. |..   +.         ...++..    .+..|.|.++  
T Consensus         6 QsP~~-l~v~~G~svtl~C~~s~s~~~~~~~~~~WYrq~~g~~p~~liy~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~   84 (111)
T d1j05a_           6 QSPAS-LAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEA   84 (111)
T ss_dssp             EECSE-EECCTTSCEEEEEEESSCCBSSSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEECSSSEEEEEESSCCG
T ss_pred             ccCCE-EEECCCCCEEEEEEeccCCccCCceeEEEEEccCCCCCEEEEEeeccccCCCCCcEEEecCCCEEEEEEccccc
Confidence            33444 8889999999999886432    2349999831 211   10         1122222    2458999999  


Q ss_pred             cCCeEEEEEEEe
Q psy8771         166 TESENYTCIAAS  177 (904)
Q Consensus       166 ~d~g~Y~c~a~n  177 (904)
                      +|++.|.|.+.+
T Consensus        85 ~Dsa~YyCa~~~   96 (111)
T d1j05a_          85 DDVATYYCQQTN   96 (111)
T ss_dssp             GGCEEEEEEECS
T ss_pred             ccCccEEEeecC
Confidence            799999997654

>d1t7va1 b.1.1.2 (A:184-277) Zinc-alpha-2-glycoprotein, ZAG, alpha-3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Zinc-alpha-2-glycoprotein, ZAG, alpha-3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.014  Score=44.88  Aligned_cols=59  Identities=19%  Similarity=0.280  Sum_probs=38.4

Q ss_pred             ecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCcee---ecceEEEEeee-----cCCeEEEEEEEe
Q psy8771         118 MLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDKLP---VGRNVLTLDRV-----TESENYTCIAAS  177 (904)
Q Consensus       118 ~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~~~---~~~~~l~i~~l-----~d~g~Y~c~a~n  177 (904)
                      ..|+.++|.|.+.| .|. ..|+|.+| |..+.......   .+++.+.+...     .+...|+|.+.-
T Consensus        13 ~~~~~~tL~C~~~gFyP~~i~v~W~~n-g~~~~~~~~~~~~~~~~~t~~~~s~l~~~~~~~~~ytC~V~H   81 (94)
T d1t7va1          13 APGEKKKLKCLAYDFYPGKIDVHWTRA-GEVQEPELRGDVLHNGNGTYQSWVVVAVPPQDTAPYSCHVQH   81 (94)
T ss_dssp             CTTSCEEEEEEEEEEBSSCEEEEEEET-TEECCCSEEEEEEETTTTEEEEEEEEEECTTCCSCEEEEEEE
T ss_pred             CCCCCEEEEEEEEeEECCCCEEEEEEC-CEECCCcEEeeeecCCCCeEEEEEEeEeCCCCCCEEEEEEEE
Confidence            35789999999999 565 47899999 66554332211   23344333332     466789998864

>d1nkra2 b.1.1.4 (A:102-200) Killer cell inhibitory receptor {Human (Homo sapiens), p58-cl42 kir [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Killer cell inhibitory receptor
species: Human (Homo sapiens), p58-cl42 kir [TaxId: 9606]

Probab=95.99  E-value=0.024  Score=43.86  Aligned_cols=71  Identities=17%  Similarity=0.219  Sum_probs=46.2

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc-eee--cceEEEEeee--cCCeEEEEEEEe
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-LPV--GRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~-~~~--~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      ..|.+...|.  ..+..|++|+|.|...- +...+.|+|+ |........ ...  ....+.|..+  .++|.|+|.-..
T Consensus         5 pkPsLsa~P~--~~V~~G~~VTL~C~~~~-~~~~f~L~k~-g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~G~Y~C~y~~   80 (99)
T d1nkra2           5 EKPSLSAQPG--PTVLAGENVTLSCSSRS-SYDMYHLSRE-GEAHERRLPAGPKVNGTFQADFPLGPATHGGTYRCFGSF   80 (99)
T ss_dssp             CCCEEEEESC--SEECTTCEEEEEEEESS-CCSEEEEEET-TCSSCEEEECEEEETTEEEEEEEEEECCSCEEEEEEEEE
T ss_pred             CCCEEEEeCC--CcccCCCeEEEEECCCC-CccEEEEEEC-CCccccEEEccccCCccEEEEEeccccccCEEEEEEeec
Confidence            4677777775  57789999999997654 4567889998 432221111 111  2334566655  799999997653

>d1ypzf1 b.1.1.1 (F:1-120) T-cell antigen receptor {Human (Homo sapiens), gamma-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), gamma-chain [TaxId: 9606]

Probab=95.89  E-value=0.011  Score=47.94  Aligned_cols=69  Identities=17%  Similarity=0.326  Sum_probs=45.2

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeCC-ccc---c----CC---------CCceee------cceEEE
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NIE---L----TP---------DDKLPV------GRNVLT  161 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~~---~----~~---------~~~~~~------~~~~l~  161 (904)
                      +.++|.. +++.+|++++|.|.+.+..  ...|.|++-. +..   +    ..         ..|+.+      +...|.
T Consensus         4 l~Q~~~s-v~~~~G~svtL~C~~~~~~~~~~~i~WYrQ~pg~~~~~l~~~~~~~~~~~~~~~~~r~~~s~~~~~~~~~L~   82 (120)
T d1ypzf1           4 LEQPEIS-ISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILT   82 (120)
T ss_dssp             EECSCSE-EEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEE
T ss_pred             eEcCCCE-EEecCCCcEEEEEEEecccccCCcccEEEeCCcccccccccccccccceeeecccccccccccccccccccc
Confidence            3444444 8888999999999988754  3568999821 111   1    00         123322      123699


Q ss_pred             Eeee--cCCeEEEEEEE
Q psy8771         162 LDRV--TESENYTCIAA  176 (904)
Q Consensus       162 i~~l--~d~g~Y~c~a~  176 (904)
                      |.+|  +|++.|.|.+.
T Consensus        83 I~~l~~~Dsa~YyCA~~   99 (120)
T d1ypzf1          83 IYSLEEEDEAIYYCSYG   99 (120)
T ss_dssp             ECSCCGGGCSEEEEEEC
T ss_pred             ccccccccceeEEEEEc
Confidence            9999  69999999764

>d1kgce1 b.1.1.1 (E:3-118) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=95.85  E-value=0.014  Score=46.69  Aligned_cols=65  Identities=18%  Similarity=0.354  Sum_probs=43.1

Q ss_pred             CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cc--cc--------------CCCCceee-----cceEEEEeee--
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NI--EL--------------TPDDKLPV-----GRNVLTLDRV--  165 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~--~~--------------~~~~~~~~-----~~~~l~i~~l--  165 (904)
                      .|.. +.+.+|++++|.|...+ ....|.|++-. +.  .+              ....++..     ....|.|.++  
T Consensus         5 ~P~~-~~~~~G~svtl~C~~~~-~~~~i~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~   82 (112)
T d1kgce1           5 SPRY-KVAKRGQDVALRCDPIS-GHVSLFWYQQALGQGPEFLTYFQNEAQLDKSGLPSDRFFAERPEGSVSTLKIQRTQQ   82 (112)
T ss_dssp             ECSE-EEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSCEEEEESSCCG
T ss_pred             CCCe-EEECCCCCEEEEEEECC-CCCEEEeeeeecccceEEeeeeccCcccccCCCCCCceeeECCcCCEEEEEECCCCc
Confidence            3444 88899999999998654 34579999821 11  01              01122221     2347999998  


Q ss_pred             cCCeEEEEEEE
Q psy8771         166 TESENYTCIAA  176 (904)
Q Consensus       166 ~d~g~Y~c~a~  176 (904)
                      +|++.|.|.+.
T Consensus        83 ~Dsa~YyCa~~   93 (112)
T d1kgce1          83 EDSAVYLCASS   93 (112)
T ss_dssp             GGCEEEEEEEE
T ss_pred             CCCEEEEEeee
Confidence            79999999875

>d2ntsp1 b.1.1.1 (P:3-118) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=95.85  E-value=0.015  Score=46.64  Aligned_cols=65  Identities=17%  Similarity=0.294  Sum_probs=43.7

Q ss_pred             CCCceEEecCCCeEEEEEEccCCCCeEEEee--CCccc-c-------------CCCCceee-----cceEEEEeee--cC
Q psy8771         111 PPALLEVMLDSPLNLSCVAVGSPMPFVKWRK--GQNIE-L-------------TPDDKLPV-----GRNVLTLDRV--TE  167 (904)
Q Consensus       111 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k--~~~~~-~-------------~~~~~~~~-----~~~~l~i~~l--~d  167 (904)
                      |.. +.+.+|+.++|.|...+. ...+.|++  .+..+ +             ....++..     ....|.|.++  +|
T Consensus         6 P~~-~~~~~G~svtl~C~~~~~-~~~~~WYrQ~pg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D   83 (113)
T d2ntsp1           6 PRY-LIKTRGQQVTLSCSPISG-HRSVSWYQQTPGQGLQFLFEYFNETQRNKGNFPGRFSGRQFSNSRSEMNVSTLELGD   83 (113)
T ss_dssp             CSE-EEEETTCCEEEEEECSTT-CCEEEEEEEETTTEEEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGG
T ss_pred             CCe-EEECCCCCEEEEEEECCC-CCEEEEEEeecccceEeeeeecccccccccccccceeeccCcCCeeEEEECCCCccc
Confidence            444 889999999999997653 35789998  31211 1             01122211     2347999999  69


Q ss_pred             CeEEEEEEEe
Q psy8771         168 SENYTCIAAS  177 (904)
Q Consensus       168 ~g~Y~c~a~n  177 (904)
                      ++.|.|.+..
T Consensus        84 sa~YyCA~~~   93 (113)
T d2ntsp1          84 SALYLCASSL   93 (113)
T ss_dssp             CEEEEEEEES
T ss_pred             ceeeeeeeeC
Confidence            9999998764

>d1hnfa1 b.1.1.1 (A:4-104) CD2, first domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD2, first domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.021  Score=42.12  Aligned_cols=45  Identities=16%  Similarity=0.257  Sum_probs=33.1

Q ss_pred             cCCCCcee-ecceEEEEeee--cCCeEEEEEEEecCcc--eEEEEEEEEE
Q psy8771         147 LTPDDKLP-VGRNVLTLDRV--TESENYTCIAASVLGV--IETSTIVKVQ  191 (904)
Q Consensus       147 ~~~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n~~g~--~~~~~~l~v~  191 (904)
                      +.....+. ..+|+|+|.+|  .|.|.|.+.+.+..|.  .+....|.|.
T Consensus        51 f~~~~~y~i~~nGtLkIK~L~~~d~GtYkv~vYd~~Gk~vlektf~LkI~  100 (101)
T d1hnfa1          51 FKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQ  100 (101)
T ss_dssp             EESCTTEEECTTSCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEE
T ss_pred             CCCCceEEEccCCcEEeeeeeecCCCcEEEEEEcCCCcEeeeeeEEEEee
Confidence            33344444 37899999999  6999999999999998  3445555543

>d1smoa_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on myeloid cells 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: TREM-1 (triggering receptor expressed on myeloid cells 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.0046  Score=49.91  Aligned_cols=63  Identities=14%  Similarity=0.195  Sum_probs=42.0

Q ss_pred             eEEecCCCeEEEEEEccC--CCCeEEEeeCC-ccc---c--C-C---------CCceeec------ceEEEEeee--cCC
Q psy8771         115 LEVMLDSPLNLSCVAVGS--PMPFVKWRKGQ-NIE---L--T-P---------DDKLPVG------RNVLTLDRV--TES  168 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~--p~p~i~W~k~~-~~~---~--~-~---------~~~~~~~------~~~l~i~~l--~d~  168 (904)
                      +.+.+|++++|.|...+.  ....+.|+|.. +..   +  . .         ..|+.+.      ..+|.|.+|  +|+
T Consensus         9 ~~v~eG~svtl~C~~~~~~~~~~~~~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~Lti~~l~~~Ds   88 (113)
T d1smoa_           9 YELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDS   88 (113)
T ss_dssp             EECCTTCCEEEEEECCHHHHTTSCEEEEEECTTSCCEEEEECCSSCCSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred             EEEccCCCEEEEEEeCCCCCCCCEEEEEECCCCCCCEEEEecCCCCceEcceECCeEEEEEECCCCEEEEEEccCCcccC
Confidence            788899999999998753  34568899831 111   1  0 0         0233321      236999999  799


Q ss_pred             eEEEEEEEe
Q psy8771         169 ENYTCIAAS  177 (904)
Q Consensus       169 g~Y~c~a~n  177 (904)
                      |.|.|.+..
T Consensus        89 g~Y~Cav~~   97 (113)
T d1smoa_          89 GLYQCVIYQ   97 (113)
T ss_dssp             EEEEEEECC
T ss_pred             ceEEEEEEC
Confidence            999998743

>d1ogae1 b.1.1.1 (E:5-118) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=95.79  E-value=0.018  Score=46.32  Aligned_cols=67  Identities=19%  Similarity=0.239  Sum_probs=44.0

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cc--cc-----CCC--------Cceee-----cceEEEEeee--
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NI--EL-----TPD--------DKLPV-----GRNVLTLDRV--  165 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~--~~-----~~~--------~~~~~-----~~~~l~i~~l--  165 (904)
                      +.|.. +.+.+|++++|.|.... ....+.|++-. +.  .+     ...        .++..     ....|.|.++  
T Consensus         4 QsP~~-~~~~~G~svtl~C~~s~-~~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~   81 (114)
T d1ogae1           4 QSPKY-LFRKEGQNVTLSCEQNL-NHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQK   81 (114)
T ss_dssp             CSCSE-EEEETTCCEEECCEECS-CCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCS
T ss_pred             EcCCe-EEEcCCCCEEEEEEEec-CCCcEEEEeeccccCCcceeeeeeeeccccccCCCceEEEcccCCeEEEEECcCCc
Confidence            34445 89999999999999863 44679999831 11  11     000        11111     2347999999  


Q ss_pred             cCCeEEEEEEEe
Q psy8771         166 TESENYTCIAAS  177 (904)
Q Consensus       166 ~d~g~Y~c~a~n  177 (904)
                      +|++.|.|.+..
T Consensus        82 ~DSa~YyCa~~~   93 (114)
T d1ogae1          82 NPTAFYLCASSS   93 (114)
T ss_dssp             CCCEEEEEEEES
T ss_pred             CCceeEEEeecc
Confidence            799999997654

>d1uvqb1 b.1.1.2 (B:95-191) Class II MHC beta chain, C-terminal domain {Human (Homo sapiens), HLA-DQ group [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Class II MHC beta chain, C-terminal domain
species: Human (Homo sapiens), HLA-DQ group [TaxId: 9606]

Probab=95.78  E-value=0.01  Score=45.87  Aligned_cols=59  Identities=20%  Similarity=0.285  Sum_probs=35.3

Q ss_pred             ecCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCC----ceeecceEEEEeee-----cCCeEEEEEEEe
Q psy8771         118 MLDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDD----KLPVGRNVLTLDRV-----TESENYTCIAAS  177 (904)
Q Consensus       118 ~~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~----~~~~~~~~l~i~~l-----~d~g~Y~c~a~n  177 (904)
                      ..++.++|.|.+.|. |. ..|+|.++ |..+..+.    ....+++++.+...     +++..|+|.+..
T Consensus        14 ~~~~~~tL~C~~~gF~P~~i~v~W~~n-g~~~~~~~~~~~~~~~~dgty~~~s~l~v~~~~~~~ytC~V~H   83 (97)
T d1uvqb1          14 ALNHHNLLVCSVTDFYPGQIKVRWFRN-DQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEH   83 (97)
T ss_dssp             -----CEEEEEEEEEBSSCCEEEEEET-TEEECTTEEECCCEECSSSCEEEEEEEECCSCTTCCEEEEEEC
T ss_pred             cCCCCEEEEEEEeeeECCCeEEEEEEC-CEEcCCCcEeceeecCCCceEEEEEEeccCCCCCCEEEEEEEe
Confidence            356778999999994 43 68999999 65544321    12234554444332     477889999865

>d1nfdb1 b.1.1.1 (B:1-117) T-cell antigen receptor {Mouse (Mus musculus), beta-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), beta-chain [TaxId: 10090]

Probab=95.70  E-value=0.0092  Score=47.93  Aligned_cols=69  Identities=16%  Similarity=0.283  Sum_probs=44.8

Q ss_pred             EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------C---------CCCceee-----cceEEEEeee-
Q psy8771         108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------T---------PDDKLPV-----GRNVLTLDRV-  165 (904)
Q Consensus       108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------~---------~~~~~~~-----~~~~l~i~~l-  165 (904)
                      .+.|.. +.+.+|+.++|.|..... ...+.|++-. +..+      .         ...++..     ....|.|.++ 
T Consensus         5 tQ~P~~-~~~~~G~~v~l~C~~~~~-~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~   82 (113)
T d1nfdb1           5 VQSPRH-IIKEKGGRSVLTCIPISG-HSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALE   82 (113)
T ss_dssp             EEECSE-EEEETTCCCEEEEECCTT-CCEEEEEEBCSSCCCEEEEEEETTTEEEESSCCTTCCCEECTTSCEEEECCSCC
T ss_pred             EEcCCE-EEEeCCCCEEEEEEeCCC-CCEEEEEEECCcCCCcceeeeeecccccCCCcccceeeEcCCCCeEEEEecccC
Confidence            344545 889999999999986543 3579999832 1111      0         0122221     1347889998 


Q ss_pred             -cCCeEEEEEEEec
Q psy8771         166 -TESENYTCIAASV  178 (904)
Q Consensus       166 -~d~g~Y~c~a~n~  178 (904)
                       +|++.|.|.+...
T Consensus        83 ~~Dsa~YyCa~~~~   96 (113)
T d1nfdb1          83 LEDSAMYFCASSLR   96 (113)
T ss_dssp             GGGCEEECEEEESS
T ss_pred             cCCceeEEEEeecC
Confidence             7999999987643

>d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Sweet potato (Ipomoea batatas) [TaxId: 4120]

Probab=95.68  E-value=0.024  Score=45.56  Aligned_cols=83  Identities=18%  Similarity=0.244  Sum_probs=48.9

Q ss_pred             CCCcceEEEeec--CCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEe-----------ecceeceEEEcCCCCCCeEEE
Q psy8771         202 VAPLDVKISEVT--ATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEI-----------SGIITTYYTVRNLSPYTEYEF  268 (904)
Q Consensus       202 ~~p~~l~~~~~~--~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~~~Y~~  268 (904)
                      .+|..+.+.-.+  .+++.|+|.-.......-.|+|....+.......           ...-....+|++|+|++.|.|
T Consensus        23 ~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T~Y~Y  102 (119)
T d1xzwa1          23 NAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYY  102 (119)
T ss_dssp             TCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEEEE
T ss_pred             CCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCCEEEE
Confidence            467666666543  5799999997522111125666655433322211           011224689999999999999


Q ss_pred             EEEEEcCCCCCCCCCCeEEecC
Q psy8771         269 YIIAVNNLGRGPPSSPAVITTG  290 (904)
Q Consensus       269 ~v~a~n~~g~s~~s~~~~~~t~  290 (904)
                      +|-.      +..|....|++.
T Consensus       103 rVG~------~~~S~~~~F~T~  118 (119)
T d1xzwa1         103 RLGF------GDAKRQFWFVTP  118 (119)
T ss_dssp             EECC------GGGCEEEEEECC
T ss_pred             EECC------CCccceEEEeCC
Confidence            9832      224555666653

>d3frua1 b.1.1.2 (A:179-269) Fc (IgG) receptor, alpha-3 domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Fc (IgG) receptor, alpha-3 domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.68  E-value=0.017  Score=43.92  Aligned_cols=58  Identities=14%  Similarity=0.263  Sum_probs=37.7

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCce--eecceEEEEeee-----cCCeEEEEEEEe
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDKL--PVGRNVLTLDRV-----TESENYTCIAAS  177 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~~--~~~~~~l~i~~l-----~d~g~Y~c~a~n  177 (904)
                      .+..++|.|.+.| .|. ..|+|.++ |..+......  ...++++.+...     ++...|+|++.-
T Consensus        14 ~~~~~~L~C~~~gF~P~~i~v~W~~n-g~~~~~~~~~~~~~~dgty~~~S~l~v~~~~~~~ytC~V~H   80 (91)
T d3frua1          14 NSGSSVLTCAAFSFYPPELKFRFLRN-GLASGSGNCSTGPNGDGSFHAWSLLEVKRGDEHHYQCQVEH   80 (91)
T ss_dssp             STTEEEEEEEEEEEBSSCCEEEEEET-TEECCCCEEEEEECSSSCEEEEEEEEEETTCGGGEEEEEEC
T ss_pred             CCCCEEEEEEEEeEECCCCEEEEEEC-CEeCCccCccceecCCCCEeEEEEEEECCCCCCEEEEEEEe
Confidence            4567899999999 465 58999999 6555433211  124444444332     466789998864

>d1rzfl2 b.1.1.2 (L:109-210) Immunoglobulin light chain lambda constant domain, CL-lambda {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin light chain lambda constant domain, CL-lambda
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.013  Score=46.04  Aligned_cols=75  Identities=16%  Similarity=0.306  Sum_probs=45.6

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCc----eeecceEEEEeee--------cCC
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDK----LPVGRNVLTLDRV--------TES  168 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~l--------~d~  168 (904)
                      .+|.+...+.. .....++.++|.|.+.| .|. ..|+|.++ |..+..+..    ....++.+.+...        ..+
T Consensus         4 ~~P~V~~~~ps-~~~~~~~~~tL~C~v~~f~P~~i~v~W~~~-g~~~~~~~~~~~~~~~~dgtys~~S~L~v~~~~w~~~   81 (102)
T d1rzfl2           4 AAPSVTLFPPS-SEELQANKATLVCLISDFYPGAVTVAWKAD-SSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSH   81 (102)
T ss_dssp             BCCEEEEECCC-HHHHHTTCEEEEEEEEEEBSSCCEEEEEET-TEECCSSEEECCCEECTTSCEEEEEEEEECHHHHHHS
T ss_pred             CCCEEEEECCC-HHHhcCCcEEEEEEEEeeCCCCeEEEEEEC-CEECCCCEEeCCcEECCCCEEEEEEEEEECHHHhCCC
Confidence            45665433222 22234677999999999 554 47999999 666654322    2234555444332        246


Q ss_pred             eEEEEEEEecC
Q psy8771         169 ENYTCIAASVL  179 (904)
Q Consensus       169 g~Y~c~a~n~~  179 (904)
                      ..|+|.+....
T Consensus        82 ~~ytC~V~H~~   92 (102)
T d1rzfl2          82 RSYSCQVTHEG   92 (102)
T ss_dssp             SCEEEEEEETT
T ss_pred             CEEEEEEEECC
Confidence            77999998753

>d1fo0b_ b.1.1.1 (B:) T-cell antigen receptor {Mouse (Mus musculus), beta-chain [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Mouse (Mus musculus), beta-chain [TaxId: 10090]

Probab=95.57  E-value=0.023  Score=45.45  Aligned_cols=70  Identities=19%  Similarity=0.376  Sum_probs=44.9

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc-------CCC---------Cceee---cceEEEEeee-
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL-------TPD---------DKLPV---GRNVLTLDRV-  165 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~-------~~~---------~~~~~---~~~~l~i~~l-  165 (904)
                      +.+.|.. +.+.+|+.++|.|...+.-...+.|++-. |..+       ..+         .++..   .+..|.|..+ 
T Consensus         4 V~Q~P~~-~~~~~G~~vtL~C~~~~~~~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~l~l~~~~   82 (112)
T d1fo0b_           4 LEQNPRW-RLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVAN   82 (112)
T ss_dssp             EEEECSE-EECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETTEEEEEEES
T ss_pred             EEeCCCe-EEECCCCCEEEEEEEecCCCCcEEEEeECCCCCccccceeccccccccccccccccccccccccEEEEecCC
Confidence            3444554 88899999999999887766789999831 2111       011         12221   2234555555 


Q ss_pred             -cCCeEEEEEEEe
Q psy8771         166 -TESENYTCIAAS  177 (904)
Q Consensus       166 -~d~g~Y~c~a~n  177 (904)
                       +|++.|.|.+..
T Consensus        83 ~~dsa~Y~Ca~~~   95 (112)
T d1fo0b_          83 MSQGRTLYCTCSA   95 (112)
T ss_dssp             CCSCEEEEEEEES
T ss_pred             ccCCccEEEEEec
Confidence             899999998653

>d1ugna1 b.1.1.4 (A:2-97) Ligand binding domain of lir-1 (ilt2) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of lir-1 (ilt2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.0091  Score=46.12  Aligned_cols=70  Identities=14%  Similarity=0.232  Sum_probs=46.4

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcccc--CCCCceeecceEEEEeee--cCCeEEEEEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIEL--TPDDKLPVGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~--~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      .|.|...|.  ..+..|++++|.|... .+...+.++|++....  .....-..+...+.|.++  +++|.|+|.-.
T Consensus         4 kP~Lsa~Ps--~~V~~G~~VTL~C~~~-~~~~~f~L~keg~~~~~~~~~~~~~~~~a~F~i~~v~~~~~G~Y~C~y~   77 (96)
T d1ugna1           4 KPTLWAEPG--SVITQGSPVTLRCQGG-QETQEYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYG   77 (96)
T ss_dssp             CCEEEEESC--SEEETTCCEEEEEECC-TTCCCEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEE
T ss_pred             CCEEEeECC--CccCCCCcEEEEEeCC-CCCCEEEEEECCCCcccEEEccCCCCCEEEEEEEecCHHHCCeEEEEEe
Confidence            567777776  5678999999999954 3345677888732111  011111124568999999  69999999864

>d1fp5a2 b.1.1.2 (A:439-543) Immunoglobulin heavy chain epsilon constant domain 4, CH4-epsilon {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain epsilon constant domain 4, CH4-epsilon
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.011  Score=46.54  Aligned_cols=60  Identities=13%  Similarity=0.238  Sum_probs=38.9

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCC-----ceeecceEEEEeee--------cCCeEEEEEEEecC
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDD-----KLPVGRNVLTLDRV--------TESENYTCIAASVL  179 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~-----~~~~~~~~l~i~~l--------~d~g~Y~c~a~n~~  179 (904)
                      .++.++|.|.+.| .|. ..|+|.++ |..+....     .....++.+.+...        ..+..|+|.+....
T Consensus        18 ~~~~vtL~Clv~~f~P~~i~v~W~~~-g~~~~~~~~~~~~~~~~~~gtys~~S~L~v~~~~W~~g~~ytC~V~H~~   92 (105)
T d1fp5a2          18 SRDKRTLACLIQNFMPEDISVQWLHN-EVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEA   92 (105)
T ss_dssp             SSCCEEEEEEEEEEBSSCCEEEEEET-TEECCGGGEEECCCEECSSSCEEEEEEEEECHHHHTTGGGEEEEEECTT
T ss_pred             cCCcEEEEEEEEeeeCCCcEEEEEEC-CEECCCceeEeeeeEecCCCCEEEEEEEEECHHHcCCCCEEEEEEEECC
Confidence            4678999999999 564 68999999 65554322     12224444444322        35678999998643

>d1f6fb1 b.1.2.1 (B:5-100) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.46  E-value=0.011  Score=45.56  Aligned_cols=78  Identities=14%  Similarity=0.094  Sum_probs=54.5

Q ss_pred             CCCcceEEEeecCCeEEEEEeCC-Cc-cceEEEEEEEeCCCCCCeEEe---ecceeceEEE--cCCCCCCeEEEEEEEEc
Q psy8771         202 VAPLDVKISEVTATSVRLDWTYP-SE-TLLYYVIQYKPKAANTPYSEI---SGIITTYYTV--RNLSPYTEYEFYIIAVN  274 (904)
Q Consensus       202 ~~p~~l~~~~~~~~sv~l~W~~~-~~-~~~~y~v~~~~~~~~~~~~~~---~~~~~~~~~i--~~L~p~~~Y~~~v~a~n  274 (904)
                      +.|+++.+.......++|+|++. .. --+.|.+.++..... .+...   .......+.+  ..+.....|.|.|.|.|
T Consensus         1 gkP~~~sC~s~~~~~~~C~W~~G~~t~L~T~Y~l~~~~~~~~-~~~eCp~y~~~~~~~C~f~~~~~~~~~~y~i~V~a~N   79 (96)
T d1f6fb1           1 GKPEIHKCRSPDKETFTCWWNPGTDGGLPTNYSLTYSKEGEK-TTYECPDYKTSGPNSCFFSKQYTSIWKIYIITVNATN   79 (96)
T ss_dssp             CCCEEEEEEBSSSSCEEEEEECCCCTTSCCEEEEEEEETTEE-EEEECSCSSTTCTTEEEECTTTCCSSCEEEEEEEEEE
T ss_pred             CCCeEeEEEeCCCCEEEEEeeCCCcCCcCceEEEEEEecCCC-ccccCCcccCCCceeEEECCccCccceEEEEEEEEEc
Confidence            36889998888888999999996 22 247899999865322 22221   1122244555  55677889999999999


Q ss_pred             CCCCCC
Q psy8771         275 NLGRGP  280 (904)
Q Consensus       275 ~~g~s~  280 (904)
                      ..|.+.
T Consensus        80 ~LG~~~   85 (96)
T d1f6fb1          80 QMGSSS   85 (96)
T ss_dssp             TTEEEE
T ss_pred             CCCCcc
Confidence            999754

>d1dqta_ b.1.1.1 (A:) Immunoreceptor CTLA-4 (CD152), N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoreceptor CTLA-4 (CD152), N-terminal fragment
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.36  E-value=0.017  Score=46.74  Aligned_cols=63  Identities=16%  Similarity=0.155  Sum_probs=41.1

Q ss_pred             eEEecCCCeEEEEEEccCCCC---eEEEeeCC-cc--cc-----CCC-------Cce-e----ecceEEEEeee--cCCe
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP---FVKWRKGQ-NI--EL-----TPD-------DKL-P----VGRNVLTLDRV--TESE  169 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p---~i~W~k~~-~~--~~-----~~~-------~~~-~----~~~~~l~i~~l--~d~g  169 (904)
                      +.+.+|+.++|.|...+.-..   .+.|++.. +.  .+     ...       .+. .    .+...|.|.+|  +|+|
T Consensus         9 ~~~~~g~~v~L~C~~~~~~~~~~~~v~WyrQ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Dsa   88 (117)
T d1dqta_           9 VLASSHGVASFPCEYSPSHNTDEVRVTVLRQTNDQMTEVCATTFTEKNTVGFLDYPFCSGTFNESRVNLTIQGLRAVDTG   88 (117)
T ss_dssp             EECCTTSCEEEEEEEESCCTTCEEEEEEEEECSSCEEEEEEEEECSSSBEECTTCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred             EEEcCCCcEEEEEECccCCcccceeEEEEEeCCCCCcEEEEEEeCCcccccCCCCcEEEEeCCCCEEEEEhhcCccccCE
Confidence            788899999999998644332   47899831 11  11     001       111 1    12347999999  7999


Q ss_pred             EEEEEEEe
Q psy8771         170 NYTCIAAS  177 (904)
Q Consensus       170 ~Y~c~a~n  177 (904)
                      .|.|.+..
T Consensus        89 ~YyCa~~~   96 (117)
T d1dqta_          89 LYLCKVEL   96 (117)
T ss_dssp             EEEEEEEE
T ss_pred             eEEEEEec
Confidence            99998764

>d1q0xl2 b.1.1.2 (L:108-212) Immunoglobulin light chain lambda constant domain, CL-lambda {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin light chain lambda constant domain, CL-lambda
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.022  Score=44.55  Aligned_cols=60  Identities=15%  Similarity=0.227  Sum_probs=38.7

Q ss_pred             cCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCCc----eeecceEEEEeee--------cCCeEEEEEEEecC
Q psy8771         119 LDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDK----LPVGRNVLTLDRV--------TESENYTCIAASVL  179 (904)
Q Consensus       119 ~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~l--------~d~g~Y~c~a~n~~  179 (904)
                      .++.++|.|.+.|. |. ..|+|.++ |..+..+..    ....++.+.+...        ..+..|+|.+....
T Consensus        19 ~~~~~tl~C~v~~f~P~~i~v~W~~~-g~~~~~~~~t~~~~~~~dgtys~~S~L~v~~~~w~~~~~ytC~V~H~~   92 (102)
T d1q0xl2          19 STAKATLVCTITDFYPGVVTVDWKVD-GTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEG   92 (102)
T ss_dssp             TTTEEEEEEEEEEEBSSCCEEEEEET-TEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETT
T ss_pred             CCCeEEEEEEEeeeeCCCCEEEEEEC-CEECCCCeEecccEEcCCCCEEEEEEEEECHHHhCCCCEEEEEEEECC
Confidence            45678999999985 54 47999999 655543321    1223444433221        36789999998644

>d1ymmd1 b.1.1.1 (D:9-104) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

Probab=95.25  E-value=0.0029  Score=49.12  Aligned_cols=65  Identities=17%  Similarity=0.365  Sum_probs=43.6

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee------cceEEEEeee--cCCeEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV------GRNVLTLDRV--TESENYTC  173 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~------~~~~l~i~~l--~d~g~Y~c  173 (904)
                      ++|.+|++++|.|...+. ...|.|++-. +..+            ....|+..      ....|.|.++  +|+|.|.|
T Consensus         3 lsV~eG~~vtL~C~~~~~-~~~i~WYrQ~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~Dsa~YyC   81 (96)
T d1ymmd1           3 LSIQEGENATMNCSYKTS-INNLQWYRQNSGRGLVHLILIRSNEREKHSGRLRVTLDTSKKSSSLLITASRAADTASYFC   81 (96)
T ss_dssp             CCCSSCCCCCBCCBCSSC-EEEEEEECCCSSCCCCCCCEEESSSCCCCSSSCCBCCBGGGTBCCBCCSSCCSTTCSCCEE
T ss_pred             ceECCCCCEEEEEEEeCC-cccEEEEEECCCCCccccccccceecccccccceeeccCcceecccCcCCCCcccCEEEeE
Confidence            678899999999987653 4579999821 1111            01123322      1236999999  69999999


Q ss_pred             EEEecCc
Q psy8771         174 IAASVLG  180 (904)
Q Consensus       174 ~a~n~~g  180 (904)
                      .+....|
T Consensus        82 A~~~~~g   88 (96)
T d1ymmd1          82 ATDTTSG   88 (96)
T ss_dssp             EEEETTS
T ss_pred             eEecCCC
Confidence            8876544

>d1j8he1 b.1.1.1 (E:2-118) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=95.25  E-value=0.04  Score=44.04  Aligned_cols=69  Identities=19%  Similarity=0.268  Sum_probs=44.7

Q ss_pred             EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cc--cc----C-C--------CCceee-----cceEEEEeee
Q psy8771         107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NI--EL----T-P--------DDKLPV-----GRNVLTLDRV  165 (904)
Q Consensus       107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~--~~----~-~--------~~~~~~-----~~~~l~i~~l  165 (904)
                      +.+.|.. +.+.+|++++|.|.... -...+.|+|-. |.  .+    . .        ..++..     ....|.|.++
T Consensus         3 V~QsP~~-~~~~~G~~v~l~C~~~~-~~~~~~WYrQ~pg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~   80 (113)
T d1j8he1           3 VTQSSRY-LVKRTGEKVFLECVQDM-DHENMFWYRQDPGLGLRLIYFSYDVKMKEKGDIPEGYSVSREKKERFSLILESA   80 (113)
T ss_dssp             EEESCSE-EEEETTCCEEECEEESS-CCSEEEEEEEETTTEEEEEEEESSTTCCEECSCCTTEEEECSSTTBCEEEESSC
T ss_pred             EEccCCE-EEECCCCCEEEEEEEcC-CccEEEeEEecCCCCcceeeeeeeeeeeecccccccceEEeccCcEeeeEeccC
Confidence            4455555 88999999999998643 34678999821 11  11    0 0        011111     2347999998


Q ss_pred             --cCCeEEEEEEEe
Q psy8771         166 --TESENYTCIAAS  177 (904)
Q Consensus       166 --~d~g~Y~c~a~n  177 (904)
                        +|+|.|.|.+..
T Consensus        81 ~~~Dsa~YyCa~~~   94 (113)
T d1j8he1          81 STNQTSMYLCASSS   94 (113)
T ss_dssp             CGGGCEEEEEEEEC
T ss_pred             ccCCcccEEeeEcc
Confidence              799999998764

>d2bnub1 b.1.1.1 (B:2-113) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=95.25  E-value=0.035  Score=44.27  Aligned_cols=67  Identities=15%  Similarity=0.289  Sum_probs=43.7

Q ss_pred             cCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc--c----C----------CCCceee----cceEEEEeee--
Q psy8771         109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE--L----T----------PDDKLPV----GRNVLTLDRV--  165 (904)
Q Consensus       109 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~--~----~----------~~~~~~~----~~~~l~i~~l--  165 (904)
                      +.|.. +.+.+|++++|.|..... ...+.|++-. +..  +    .          ...+...    ....|.|.++  
T Consensus         4 Q~P~~-~~~~~G~svtl~C~~s~~-~~~~~WYrQ~~g~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~   81 (112)
T d2bnub1           4 QTPKF-QVLKTGQSMTLQCAQDMN-HEYMSWYRQDPGMGLRLIHYSVGAGITDQGEVPNGYNVSRSTTEDFPLRLLSAAP   81 (112)
T ss_dssp             EECSE-EEEETTCCEEEEEEESSC-CSEEEEEEEETTTEEEEEEEEEETTEEEECSSCTTCEECCSSSSBCCEEESSCCG
T ss_pred             ECCCe-EEECCCCCEEEEEEEECC-ccceEecccccccCccceeeEeccCceecCccccceeEecCCCCEEEEEECCCCH
Confidence            34454 789999999999987643 4679999821 211  1    0          0011111    1347999998  


Q ss_pred             cCCeEEEEEEEe
Q psy8771         166 TESENYTCIAAS  177 (904)
Q Consensus       166 ~d~g~Y~c~a~n  177 (904)
                      +|++.|.|.+..
T Consensus        82 ~DsavYyCA~~~   93 (112)
T d2bnub1          82 SQTSVYFCASSY   93 (112)
T ss_dssp             GGCEEEEEEEEC
T ss_pred             HHCEEEEEeecC
Confidence            799999997753

>d1hdma1 b.1.1.2 (A:94-196) Class II MHC alpha chain, C-terminal domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Class II MHC alpha chain, C-terminal domain
species: Human (Homo sapiens), HLA-DM [TaxId: 9606]

Probab=95.12  E-value=0.03  Score=43.56  Aligned_cols=60  Identities=17%  Similarity=0.272  Sum_probs=40.0

Q ss_pred             ecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCce---eecceEEEEeee-----cCCeEEEEEEEec
Q psy8771         118 MLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDKL---PVGRNVLTLDRV-----TESENYTCIAASV  178 (904)
Q Consensus       118 ~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~~---~~~~~~l~i~~l-----~d~g~Y~c~a~n~  178 (904)
                      ..|+..+|.|.+.| .|. ..|.|.+| |..+......   ..+++++.+...     +++..|+|.+.-.
T Consensus        16 e~~~~~tL~C~v~gF~P~~i~V~W~~n-g~~~~~~~~~~~~~~~dgty~~~S~L~v~~~~~~~ytC~V~H~   85 (103)
T d1hdma1          16 EFGKPNTLVCFVSNLFPPMLTVNWHDH-SVPVEGFGPTFVSAVDGLSFQAFSYLNFTPEPSDIFSCIVTHE   85 (103)
T ss_dssp             CTTSCEEEEEEEEEEBSSCEEEEEEET-TEECSSCCCEEEEEETTTEEEEEEEEEECCCTTCCEEEEEEET
T ss_pred             hcCCCeEEEEEEeeEECCCCEEEEEEC-CeecCCcEeceEEeCCCCcEEEEEEEEEecCCCCEEEEEEEeC
Confidence            36888999999999 564 57899999 6555433221   234555555432     4667799988764

>d1i8lc_ b.1.1.1 (C:) Immunoreceptor CTLA-4 (CD152), N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoreceptor CTLA-4 (CD152), N-terminal fragment
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.033  Score=45.00  Aligned_cols=63  Identities=11%  Similarity=0.135  Sum_probs=41.4

Q ss_pred             eEEecCCCeEEEEEEccCCCC---eEEEeeCCccc---cC-----CC-------Cce-----eecceEEEEeee--cCCe
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP---FVKWRKGQNIE---LT-----PD-------DKL-----PVGRNVLTLDRV--TESE  169 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p---~i~W~k~~~~~---~~-----~~-------~~~-----~~~~~~l~i~~l--~d~g  169 (904)
                      +.+.+|+.++|.|.....-.+   .|.|+|.....   +.     ..       .+.     ......|.|.+|  +|.|
T Consensus         9 ~~~~~g~~vtL~C~~~~~~~~~~~~v~WyrQ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Dsa   88 (118)
T d1i8lc_           9 VLASSRGIASFVCEYASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLRAMDTG   88 (118)
T ss_dssp             EECCSSSCEEEEEEECCCSCCSEEEEEEEEESTTCCCEEEEEEEETTSCCCCCSSCSCCCCBCSSEEEEEECSCCGGGCE
T ss_pred             EEEeCCCcEEEEEEccccccccceeEEEEEECCCCeeEEEEEEeCCCCEecccCCcEEeEcCCCCEEEEEeeccccCCCE
Confidence            778899999999998654333   58899842211   10     00       010     012347999999  7999


Q ss_pred             EEEEEEEe
Q psy8771         170 NYTCIAAS  177 (904)
Q Consensus       170 ~Y~c~a~n  177 (904)
                      .|.|.+..
T Consensus        89 ~YyCa~~~   96 (118)
T d1i8lc_          89 LYICKVEL   96 (118)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEeEec
Confidence            99998764

>d1ugna2 b.1.1.4 (A:98-195) Ligand binding domain of lir-1 (ilt2) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of lir-1 (ilt2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.03  Score=43.25  Aligned_cols=72  Identities=18%  Similarity=0.176  Sum_probs=44.5

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC---Ccee--ecceEEEEeee--cCCeEEEEEEE
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD---DKLP--VGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~---~~~~--~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      .|.|...|.  -.+..|++++|.|.... ....+..+|++.......   ....  .....+.|.++  .|+|.|+|.-.
T Consensus         4 kPsLsa~P~--~~v~~G~~VTL~C~~~~-~~~~f~L~k~g~~~~~~~~~~~~~~~~~~~a~F~l~~v~~~~~G~Y~C~y~   80 (98)
T d1ugna2           4 KPTLSAQPS--PVVNSGGNVTLQCDSQV-AFDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAY   80 (98)
T ss_dssp             CCEEEEESC--SEEETTCCEEEEEECSS-CCSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEE
T ss_pred             CCEEEeeCC--CccCCCCcEEEEeCCCC-CCCEEEEEECCCcCCcEeeeeEEcCCCceEEEEEeeecccCCCeEEEEeeE
Confidence            577777775  56889999999998653 234567777733221110   0010  12346999998  69999999765


Q ss_pred             ec
Q psy8771         177 SV  178 (904)
Q Consensus       177 n~  178 (904)
                      ..
T Consensus        81 ~~   82 (98)
T d1ugna2          81 DS   82 (98)
T ss_dssp             CT
T ss_pred             cC
Confidence            43

>d1hxmb2 b.1.1.2 (B:124-230) T-cell antigen receptor {Human (Homo sapiens), delta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), delta-chain [TaxId: 9606]

Probab=95.01  E-value=0.039  Score=43.45  Aligned_cols=79  Identities=14%  Similarity=0.172  Sum_probs=46.3

Q ss_pred             CCCCCeEEcCCCCceEEecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCce---eecceEEEEee-e----cC-Ce
Q psy8771         101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDKL---PVGRNVLTLDR-V----TE-SE  169 (904)
Q Consensus       101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~~---~~~~~~l~i~~-l----~d-~g  169 (904)
                      ...+|++..-+........+..++|.|.+.| .|. ..|+|.++ |..+......   ...++.+.+.. |    ++ +.
T Consensus         5 ~~~~P~v~i~~Ps~~e~~~~~~~~l~Clv~~f~P~~i~v~W~~~-g~~~~~~~~~~~~~~~~gt~~~~S~L~v~~~~w~~   83 (107)
T d1hxmb2           5 ADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEK-KSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSLDK   83 (107)
T ss_dssp             SCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEEEEEES-SSCCCCCCEECCCEECSSSEEEEEEEEECTGGGGS
T ss_pred             CCCCCeEEEECCCHHHHccCCcEEEEEEEeEEeCCceEEEEEEC-CeEccCCEEccceecCCCeEEEEEEEEEecccCCC
Confidence            4556665544333244567789999999999 555 36899998 5555433221   11333332221 2    23 45


Q ss_pred             EEEEEEEecCc
Q psy8771         170 NYTCIAASVLG  180 (904)
Q Consensus       170 ~Y~c~a~n~~g  180 (904)
                      .|+|.+.....
T Consensus        84 ~ytC~V~H~s~   94 (107)
T d1hxmb2          84 EHRCIVRHENN   94 (107)
T ss_dssp             CEEEEEEETTS
T ss_pred             eEEEEEEECCC
Confidence            79999986543

>d2cdeb1 b.1.1.1 (B:5-116) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=94.94  E-value=0.012  Score=47.12  Aligned_cols=69  Identities=20%  Similarity=0.384  Sum_probs=44.6

Q ss_pred             CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc-------CCC--------Cceee-----cceEEEEeee--c
Q psy8771         110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL-------TPD--------DKLPV-----GRNVLTLDRV--T  166 (904)
Q Consensus       110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~-------~~~--------~~~~~-----~~~~l~i~~l--~  166 (904)
                      .|.. +.+.+|+.++|.|..... ...+.|++-. +..+       ...        .+...     ....|.|.++  +
T Consensus         4 sP~~-~~~~~G~svtL~C~~~~~-~~~~~WYrQ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~   81 (112)
T d2cdeb1           4 TPRY-LVIGTGKKITLECSQTMG-HDKMYWYQQDPGMELHLIHYSYGVNSTEKGDLSSESTVSRIRTEHFPLTLESARPS   81 (112)
T ss_dssp             ECSE-EEEETTCCBCCEEEETTC-CSEEEEEEECTTSCCEEEEEESSTTCCEESSSCCCCEECCSSSSBCCEEBSSCCTT
T ss_pred             CCCE-EEECCCCCEEEEEEEeCC-cccEEEEEEcCCCCcEEeeeeeccCccccccccccceeecCCCCceEeeecccccc
Confidence            3444 889999999999997643 4579999831 2111       000        11111     2346899888  6


Q ss_pred             CCeEEEEEEEecCc
Q psy8771         167 ESENYTCIAASVLG  180 (904)
Q Consensus       167 d~g~Y~c~a~n~~g  180 (904)
                      |++.|.|.+....+
T Consensus        82 Dsa~YyCA~~~~~~   95 (112)
T d2cdeb1          82 HTSQYLCASSENIG   95 (112)
T ss_dssp             TCSEEEEEEECSSS
T ss_pred             ccccEEEEEecCCC
Confidence            99999998765443

>d2hyma1 b.1.2.1 (A:1-109) Interferon-alpha/beta receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-alpha/beta receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.12  Score=40.34  Aligned_cols=76  Identities=12%  Similarity=0.211  Sum_probs=54.0

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee---cCceEEEEcC--CCCCCeEEEEEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV---DNNQLTTISD--LTPHTIYTIRVQ  557 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--L~p~t~Y~~~V~  557 (904)
                      ..|.++++...+ -.-.|+|+++... .....|.|+|+..+.  ...|.....   ...+.+.|+.  +.+...|.++|+
T Consensus         9 ~~P~nv~i~s~N-f~~iL~W~p~~~s-~~~~~YtVqy~~~~~--~~~W~~v~~C~~it~t~CDLT~e~~~~~~~Y~~RV~   84 (109)
T d2hyma1           9 DESCTFKISLRN-FRSILSWELKNHS-IVPTHYTLLYTIMSK--PEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLE   84 (109)
T ss_dssp             TCCCEEEEEESS-SCEEEEEECCCSS-CCCCEEEEEEEETTC--TTCCEECSSSSSBSCSEEECTTTCCCSSSCEEEEEE
T ss_pred             CCCeeEEEEEEC-CceEEEECCCCCC-CCCeEEEEEEEEEcc--cccCccchhhhCCCCCeEeCchhhccCCccEEEEEE
Confidence            468889887766 5678999985432 344789999986542  245766532   4567788876  557778999999


Q ss_pred             EEeCC
Q psy8771         558 AFTSV  562 (904)
Q Consensus       558 a~~~~  562 (904)
                      |..+.
T Consensus        85 A~~G~   89 (109)
T d2hyma1          85 GFSGN   89 (109)
T ss_dssp             EEETT
T ss_pred             EEcCC
Confidence            99754

>d1ow0a2 b.1.1.2 (A:343-450) Immunoglobulin heavy chain alpha constant domain 3, CH3-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain alpha constant domain 3, CH3-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.018  Score=45.71  Aligned_cols=61  Identities=28%  Similarity=0.665  Sum_probs=39.3

Q ss_pred             EEecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCcee--------ecceEEEEee---e-----cCCeEEEEEEEe
Q psy8771         116 EVMLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDKLP--------VGRNVLTLDR---V-----TESENYTCIAAS  177 (904)
Q Consensus       116 ~~~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~~~--------~~~~~l~i~~---l-----~d~g~Y~c~a~n  177 (904)
                      ....++.++|.|.+.| .|. ..|+|+++ |..+.......        .+++.+.+..   +     ..+..|+|.+..
T Consensus        16 e~~~~~~~tl~C~~~~f~P~~i~v~W~~~-g~~~~~~~~~t~~~~~~~~~~~gtys~~S~L~v~~~~w~~g~~ytC~V~H   94 (108)
T d1ow0a2          16 ELALNELVTLTCLARGFSPKDVLVRWLQG-SQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGH   94 (108)
T ss_dssp             TTTSSSEEEEEEEEEEESSSCCEEEEEET-TEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEEC
T ss_pred             HhccCCceEEEEEEEEeECCCEEEEEEEC-CeEcCCCceEcccceecccCCCCcEEEEEEEEEcHHHhCCCCEEEEEEEe
Confidence            3456789999999999 465 48999999 66554332111        1344443322   2     357899999975

>d1u9ka_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on myeloid cells 1) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: TREM-1 (triggering receptor expressed on myeloid cells 1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.71  E-value=0.064  Score=42.23  Aligned_cols=64  Identities=16%  Similarity=0.245  Sum_probs=43.5

Q ss_pred             eEEecCCCeEEEEEEccC--CCCeEEEeeCC-ccc----c-CC----------CCceeec------ceEEEEeee--cCC
Q psy8771         115 LEVMLDSPLNLSCVAVGS--PMPFVKWRKGQ-NIE----L-TP----------DDKLPVG------RNVLTLDRV--TES  168 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~--p~p~i~W~k~~-~~~----~-~~----------~~~~~~~------~~~l~i~~l--~d~  168 (904)
                      ..+.+|++++|.|...|.  ....+.|.+.. +..    + ..          ..|+.+.      ...|.|.+|  +|.
T Consensus         5 ~~~~eG~svtl~C~ys~~~~~~~~~~W~rq~pg~~~~~li~~~~~~~~~~~~~~gR~sis~d~~~~~~~lti~~L~~eDs   84 (110)
T d1u9ka_           5 YDLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPSEAMLQVQMTDLQVTDS   84 (110)
T ss_dssp             EEECTTCCEEEEEECCHHHHTTSEEEEEECCTTSCCEEEEECCSSTTSCEEEEETTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred             CcCCCCCCEEEEEEECCCCccCCcEEEEEECCCCCEEEEEecCCCceeechhhCcEEEEEEECCCCEEEEEECccccCCC
Confidence            788999999999999864  44568899831 211    1 10          1234331      135889999  799


Q ss_pred             eEEEEEEEec
Q psy8771         169 ENYTCIAASV  178 (904)
Q Consensus       169 g~Y~c~a~n~  178 (904)
                      |.|.|.....
T Consensus        85 a~YyCa~~~~   94 (110)
T d1u9ka_          85 GLYRCVIYHP   94 (110)
T ss_dssp             EEEEEEEECT
T ss_pred             EEEEEEEeCC
Confidence            9999987543

>d2c4fu1 b.1.2.1 (U:91-210) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.026  Score=45.06  Aligned_cols=69  Identities=19%  Similarity=0.226  Sum_probs=48.1

Q ss_pred             CCCCCCeEEEecCCceEEEEecCCCC---CCC----------ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCC
Q psy8771         482 GTAPRDVQVRPLSSSTMVIQWDEPET---PNG----------QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTP  548 (904)
Q Consensus       482 ~~~p~~l~v~~~~~~~~~l~W~~p~~---~~~----------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p  548 (904)
                      .+|| .+.+.....++|.|.-.+|..   .++          ....|.|.|+..++.      .   .......|.+|.|
T Consensus        18 IGPP-~v~~~~~~~~sl~V~i~~P~t~~~~~~~~~~~~d~~~~~l~Y~V~~w~~~s~------~---~~~~~~~l~~L~p   87 (116)
T d2c4fu1          18 LGQP-TIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWSGKKT------A---KTNTNEFLIDVDK   87 (116)
T ss_dssp             CCCC-CEEEEEEETTEEEEEECCCEEEEESSSCEEEHHHHHGGGCEEEEEECCCCEE------E---EESSSEEEEECCT
T ss_pred             eCCc-eEEEEecCCCEEEEEEeCCCCcccCCCceeehhhhccCCcEEEEEEEECCce------E---EEeeeEEEeCCCC
Confidence            4566 466656666789999988742   111          125799999876521      1   1234578999999


Q ss_pred             CCeEEEEEEEEe
Q psy8771         549 HTIYTIRVQAFT  560 (904)
Q Consensus       549 ~t~Y~~~V~a~~  560 (904)
                      ++.|.|+|+|.-
T Consensus        88 ~t~YCv~Vqa~i   99 (116)
T d2c4fu1          88 GENYCFSVQAVI   99 (116)
T ss_dssp             TCCCEEEEEEEC
T ss_pred             CCcEEEEEEEEe
Confidence            999999999984

>d1nkra1 b.1.1.4 (A:6-101) Killer cell inhibitory receptor {Human (Homo sapiens), p58-cl42 kir [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Killer cell inhibitory receptor
species: Human (Homo sapiens), p58-cl42 kir [TaxId: 9606]

Probab=94.61  E-value=0.039  Score=42.31  Aligned_cols=71  Identities=14%  Similarity=0.185  Sum_probs=46.1

Q ss_pred             CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC--CCCcee--ecceEEEEeee--cCCeEEEEEEEe
Q psy8771         104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLP--VGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~--~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      .|.|...|.  -.+..|.+++|.|...-. ...+.++|++.....  ......  .....+.|.++  .++|.|+|.-..
T Consensus         2 KPsLsa~P~--~~V~~G~~VTl~C~~~~~-~~~f~L~keg~~~~~~~~~~~~~~~~~~a~F~l~~v~~~~~G~Y~C~y~~   78 (96)
T d1nkra1           2 KPSLLAHPG--PLVKSEETVILQCWSDVM-FEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV   78 (96)
T ss_dssp             CCEEEEESC--SEEETTCCEEEEEEESSC-CSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred             CCEEEeeCC--CccCCCCcEEEEECCCCC-CCEEEEEECCCcCCceeeeeeecCCceEEEEEEcccCcccCeEEEEEEEc
Confidence            366666675  678899999999996533 446778887332110  001111  12346999999  699999997654

>d2agjh1 b.1.1.1 (H:1-120) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Engineered (including hybrid species)

Probab=94.55  E-value=0.048  Score=43.32  Aligned_cols=62  Identities=24%  Similarity=0.385  Sum_probs=41.1

Q ss_pred             eEEecCCCeEEEEEEccCC----CCeEEEeeCC-ccccC----------------CCCceeec------ceEEEEeee--
Q psy8771         115 LEVMLDSPLNLSCVAVGSP----MPFVKWRKGQ-NIELT----------------PDDKLPVG------RNVLTLDRV--  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p----~p~i~W~k~~-~~~~~----------------~~~~~~~~------~~~l~i~~l--  165 (904)
                      ..+.+|++++|.|.+.|..    ...+.|++.. +..+.                -..|+.+.      ...|.|.+|  
T Consensus        10 ~~v~PG~sv~LsC~~SG~s~ss~~~~~~WyRQ~Pg~~le~l~~i~~~~~~~~~~~~~gRft~s~d~s~~~~~L~i~~l~~   89 (120)
T d2agjh1          10 TLVKPTQTLTLTCTFSGFSLTTTGEGVGWIRQPPGKALEFLAFIYWNDAKRYNPSLQSRLTITKDASKKQVVLTLTNLDP   89 (120)
T ss_dssp             SBCCSSSEEEEEEEEESCCTTSSSCEEEEEEECTTSCCEEEEEEEGGGCEEECGGGCSSEEEECCTTTTEEEEEEESCCG
T ss_pred             eeECCCCCEEEEEEEcccCccCCCCeEeeccccccccceeeecccCCcccccchhhccccceecccccceeeeeEEeeee
Confidence            4467899999999998753    2468899721 11110                02345431      246999999  


Q ss_pred             cCCeEEEEEEE
Q psy8771         166 TESENYTCIAA  176 (904)
Q Consensus       166 ~d~g~Y~c~a~  176 (904)
                      +|.+.|.|...
T Consensus        90 eDsAvYyCAr~  100 (120)
T d2agjh1          90 VDTATYYCART  100 (120)
T ss_dssp             GGCEEEEEEEE
T ss_pred             ccceEEeeEec
Confidence            79999999644

>d7fabh1 b.1.1.1 (H:1-116) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 2.1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 2.1 [TaxId: 9606]

Probab=94.55  E-value=0.12  Score=40.38  Aligned_cols=64  Identities=19%  Similarity=0.330  Sum_probs=43.0

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cccc------CC----------CCceeec------ceEEEEeee--cC
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NIEL------TP----------DDKLPVG------RNVLTLDRV--TE  167 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~~~------~~----------~~~~~~~------~~~l~i~~l--~d  167 (904)
                      -.+.+|++++|.|+++|...  -.+.|.+-. |..+      ..          ..|+.+.      ...|.|++|  +|
T Consensus        10 ~lvkPg~sl~LsC~~SG~~~~~~~~~WvRQ~PGkglEwlg~i~~~~~~~y~~~~kgR~tis~D~s~~~~~L~i~~L~~eD   89 (116)
T d7fabh1          10 GLVRPSQTLSLTCTVSGTSFDDYYWTWVRQPPGRGLEWIGYVFYTGTTLLDPSLRGRVTMLVNTSKNQFSLRLSSVTAAD   89 (116)
T ss_dssp             SEECTTSCEEEEEEEESSCSTTSEEEEEEECTTSCCEEEEEECTTSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred             ceECCCCCEEEEEEEeeecCCCCcceeceECCCCcceeeeeecccccceeccceeecceeecccchhhhhcccccccccc
Confidence            56788999999999999755  468899721 2111      11          1344331      236999999  69


Q ss_pred             CeEEEEEEEec
Q psy8771         168 SENYTCIAASV  178 (904)
Q Consensus       168 ~g~Y~c~a~n~  178 (904)
                      .+.|.|.....
T Consensus        90 tAvYyCAr~~~  100 (116)
T d7fabh1          90 TAVYYCARNLI  100 (116)
T ss_dssp             CEEEEEEEECS
T ss_pred             ceEEEeeeecC
Confidence            99999975443

>d1o0va1 b.1.1.2 (A:228-330) Immunoglobulin heavy chain epsilon constant domain 2, CH2-epsilon {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain epsilon constant domain 2, CH2-epsilon
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.55  E-value=0.059  Score=42.11  Aligned_cols=61  Identities=15%  Similarity=0.306  Sum_probs=39.1

Q ss_pred             cCCCeEEEEEEcc-CCCC-eEEEeeCCccccCCCCcee---ecceEEEEee-e-------cCCeEEEEEEEecCc
Q psy8771         119 LDSPLNLSCVAVG-SPMP-FVKWRKGQNIELTPDDKLP---VGRNVLTLDR-V-------TESENYTCIAASVLG  180 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~p-~i~W~k~~~~~~~~~~~~~---~~~~~l~i~~-l-------~d~g~Y~c~a~n~~g  180 (904)
                      .+..++|.|.+.| .|.. .|+|.++ |..+.......   ..++.+.+.. |       ..+..|+|.+.....
T Consensus        20 ~~~tv~L~Cl~~~f~P~~i~v~W~~~-g~~~~~~~~~~~~~~~~~~y~~~S~L~v~~~~w~~~~~ytC~V~H~~~   93 (104)
T d1o0va1          20 FPPTIQLLCLVSGYTPGTIQITWLED-GQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGH   93 (104)
T ss_dssp             CCSEEEEEEEEEEECCCCEEEEEEET-TEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTE
T ss_pred             CCCeEEEEEEEEEEECCCcEEEEEEC-CEEccCCceeeeEeCCCCeEEEEEEEEECHHHcCCCCEEEEEEEECCE
Confidence            4567889999999 6664 6899999 66655432211   2333333322 2       257889999987643

>d1xiwa_ b.1.1.4 (A:) CD3 epsilon chain ectodomain fragment {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: CD3 epsilon chain ectodomain fragment
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.036  Score=40.05  Aligned_cols=73  Identities=14%  Similarity=0.283  Sum_probs=47.2

Q ss_pred             EEecCCCeEEEEEEccCCCCeEEEeeCCccccCC---CCceeecceEEEEeee---cCCeEEEEEEEecC-cceEEEEEE
Q psy8771         116 EVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP---DDKLPVGRNVLTLDRV---TESENYTCIAASVL-GVIETSTIV  188 (904)
Q Consensus       116 ~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~---~~~~~~~~~~l~i~~l---~d~g~Y~c~a~n~~-g~~~~~~~l  188 (904)
                      +-..|..|.|.|.-  .....|.|.++ +..+..   ...+..+...|.+.+.   +++|.|.|.+.... .....-.+|
T Consensus         6 VsISGTtV~LTCP~--~~~~~i~W~~n-~~~~~~~~~~~~~~~~~~~l~L~dfSe~e~sGyY~C~~~~~~~~~~~~~LYL   82 (91)
T d1xiwa_           6 VSISGTTVILTCPQ--YPGSEILWQHN-DKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYL   82 (91)
T ss_dssp             EEEETTEEEEECSS--CTTSCEEEEET-TEEESSSCSCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGCCEEEEE
T ss_pred             EEEeCCEEEEECCC--CCCCceeeeec-cccccCCCcccccccccceEEecccCccccCceEEEEcCCCCCCCcceEEEE
Confidence            34578999999963  34567999998 544432   2234456668888887   58999999985422 223334445


Q ss_pred             EEE
Q psy8771         189 KVQ  191 (904)
Q Consensus       189 ~v~  191 (904)
                      +++
T Consensus        83 KAR   85 (91)
T d1xiwa_          83 RAR   85 (91)
T ss_dssp             EEC
T ss_pred             EeE
Confidence            443

>d1xaua_ b.1.1.4 (A:) B and T lymphocyte attenuator, Btla {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: B and T lymphocyte attenuator, Btla
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.53  E-value=0.12  Score=36.81  Aligned_cols=75  Identities=19%  Similarity=0.267  Sum_probs=48.3

Q ss_pred             eEEecCCCeEEEEEEcc-CCCCeEEEeeCCcc---ccCCCCcee-e-------cceEEEEeee--cCCeEEEEEEEecCc
Q psy8771         115 LEVMLDSPLNLSCVAVG-SPMPFVKWRKGQNI---ELTPDDKLP-V-------GRNVLTLDRV--TESENYTCIAASVLG  180 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~~~---~~~~~~~~~-~-------~~~~l~i~~l--~d~g~Y~c~a~n~~g  180 (904)
                      -.+..|+.+.|+|.+.- .-.|.++|-|-.|.   .+..+.+.. .       .-..|.+.-+  +|.|.|+|.|.-..|
T Consensus        13 hs~~~G~~f~leCPVkYC~~RPnVtWCKlngt~cv~Le~~pq~~TsW~e~~nis~FvLhF~pvl~sDnGsYrCSanf~s~   92 (104)
T d1xaua_          13 HSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQ   92 (104)
T ss_dssp             EEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETTE
T ss_pred             eeEecCCceEecCcchhhcCCCCcEEEEeCCcEEEEeecCCccccchhhcCCeeEEEEEeeeeeecCCCceEEecCCChh
Confidence            77889999999999985 45689999984343   233222211 1       1224555554  799999999976666


Q ss_pred             ceE-EEEEEE
Q psy8771         181 VIE-TSTIVK  189 (904)
Q Consensus       181 ~~~-~~~~l~  189 (904)
                      -.+ .+..+.
T Consensus        93 vieSHSvti~  102 (104)
T d1xaua_          93 VINSHSVTIH  102 (104)
T ss_dssp             EEECCCEEEE
T ss_pred             heecceEEEE
Confidence            533 344443

>d2mhaa1 b.1.1.2 (A:182-270) Class I MHC, alpha-3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Class I MHC, alpha-3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.52  E-value=0.034  Score=41.99  Aligned_cols=59  Identities=24%  Similarity=0.398  Sum_probs=37.0

Q ss_pred             ecCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCCc----eeecceEEEEeee-----cCCeEEEEEEEe
Q psy8771         118 MLDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDK----LPVGRNVLTLDRV-----TESENYTCIAAS  177 (904)
Q Consensus       118 ~~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~----~~~~~~~l~i~~l-----~d~g~Y~c~a~n  177 (904)
                      ..++.++|.|.+.|. |. ..|+|.++ |..+..+..    ...+++.+.+...     .+...|+|.+.-
T Consensus        13 ~~~~~~~L~C~a~gFyP~~i~v~W~~~-g~~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~~ytC~V~H   82 (89)
T d2mhaa1          13 RPEDKVTLRCWALGFYPADITLTWQLN-GEELIQDMELVETRPAGDGTFQKWASVVVPLGKEQYYTCHVYH   82 (89)
T ss_dssp             SCSSEEEEEEEEESCBSSCCEEEEEET-TEEECTTCEECCCEECSSSCEEEEEEEEEESSTTTTCEEEEEC
T ss_pred             CCCCCEEEEEEEEeEECCCCEEEEEEC-CEEeCCCEEECcEecCCCCcEEEEEEEEecCcCCCEEEEEEEE
Confidence            345789999999995 43 46899999 665544322    2233443333221     456679998863

>d1nfde2 b.1.1.2 (E:108-215) Immunoglobulin light chain lambda constant domain, CL-lambda {Hamster (Cricetulus griseus) [TaxId: 10029]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin light chain lambda constant domain, CL-lambda
species: Hamster (Cricetulus griseus) [TaxId: 10029]

Probab=94.45  E-value=0.012  Score=46.29  Aligned_cols=76  Identities=14%  Similarity=0.259  Sum_probs=44.7

Q ss_pred             CCCeEEcCCCCceEEecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCce---eecceEEEEeee--------cCCe
Q psy8771         103 VPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDKL---PVGRNVLTLDRV--------TESE  169 (904)
Q Consensus       103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~~---~~~~~~l~i~~l--------~d~g  169 (904)
                      .+|.+...+.. ..-..++.++|.|.+.| .|. ..|+|.++ |..+......   ...++.+.+...        +++.
T Consensus         4 ~~P~V~v~~ps-~~~~~~~~~~l~C~~~gf~P~~i~v~W~~~-g~~~~~~~~~~~~~~~~~tys~~S~l~v~~~~w~~~~   81 (104)
T d1nfde2           4 SSPKVTVFPPS-PEELRTNKATLVCLVNDFYPGSATVTWKAN-GATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHN   81 (104)
T ss_dssp             BCCEEECCCCC-HHHHHTTEECCCEEEEEEBSSCCEEEEEET-TEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCS
T ss_pred             cCCEEEEECCC-HHHHcCCcEEEEEEEEEeeCCCCEEEEEEC-CEECCCCEEeccccCCCceEEEEEEEEEcHHHcCCCC
Confidence            34555443322 11124567899999999 565 48999999 6555433221   113444433322        3667


Q ss_pred             EEEEEEEecCc
Q psy8771         170 NYTCIAASVLG  180 (904)
Q Consensus       170 ~Y~c~a~n~~g  180 (904)
                      .|+|.+.....
T Consensus        82 ~ytC~V~H~~~   92 (104)
T d1nfde2          82 RVSCQVTHEGE   92 (104)
T ss_dssp             CEEEEEECTTT
T ss_pred             EEEEEEEECCC
Confidence            89999987554

>d2h26a1 b.1.1.2 (A:184-279) CD1, alpha-3 domain {Human (Homo sapiens), CD1a [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: CD1, alpha-3 domain
species: Human (Homo sapiens), CD1a [TaxId: 9606]

Probab=94.40  E-value=0.028  Score=43.17  Aligned_cols=58  Identities=26%  Similarity=0.438  Sum_probs=37.3

Q ss_pred             cCCCeEEEEEEcc-CCCC-eEEEeeCCccccCCCC---ceeecceEEEEeee-----cCCeEEEEEEEe
Q psy8771         119 LDSPLNLSCVAVG-SPMP-FVKWRKGQNIELTPDD---KLPVGRNVLTLDRV-----TESENYTCIAAS  177 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~p-~i~W~k~~~~~~~~~~---~~~~~~~~l~i~~l-----~d~g~Y~c~a~n  177 (904)
                      .+..++|.|.+.| .|.. .|+|.++ +.......   -....++++.+...     ++...|+|.+..
T Consensus        15 ~~~~vtL~C~a~gF~P~~i~v~W~~~-~~~~~~~~~~~~~~~~dgty~~~S~L~v~~~~~~~ytC~V~H   82 (96)
T d2h26a1          15 GPGRLQLVCHVSGFYPKPVWVMWMRG-EQEQQGTQLGDILPNANWTWYLRATLDVADGEAAGLSCRVKH   82 (96)
T ss_dssp             STTEEEEEEEEEEEBSSCEEEEEEET-TEECTTCEECCCEECTTSCEEEEEEEEEEGGGCTTEEEEEEE
T ss_pred             CCCeEEEEEEEEEEECCCcEEEEEEC-cccCCCceeCccEeCCCCcEEEEEEEEEeCccCCEEEEEEEe
Confidence            3467999999999 5765 7999998 55443321   12234554444322     467789998875

>d2hyma1 b.1.2.1 (A:1-109) Interferon-alpha/beta receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-alpha/beta receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.24  Score=38.50  Aligned_cols=77  Identities=13%  Similarity=0.131  Sum_probs=56.1

Q ss_pred             CCCCCCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCeEEe---ecceeceEEEcC--CCCCCeEEEEEE
Q psy8771         199 TLPVAPLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPYSEI---SGIITTYYTVRN--LSPYTEYEFYII  271 (904)
Q Consensus       199 ~~P~~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~~~~---~~~~~~~~~i~~--L~p~~~Y~~~v~  271 (904)
                      ..+++|.|+++.... -.-.|+|+++  ...-..|.|+|+.-+....|..+   .....+.+.|.+  +.+...|..+|+
T Consensus         6 ~~~~~P~nv~i~s~N-f~~iL~W~p~~~s~~~~~YtVqy~~~~~~~~W~~v~~C~~it~t~CDLT~e~~~~~~~Y~~RV~   84 (109)
T d2hyma1           6 DYTDESCTFKISLRN-FRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLE   84 (109)
T ss_dssp             CCTTCCCEEEEEESS-SCEEEEEECCCSSCCCCEEEEEEEETTCTTCCEECSSSSSBSCSEEECTTTCCCSSSCEEEEEE
T ss_pred             CCCCCCeeEEEEEEC-CceEEEECCCCCCCCCeEEEEEEEEEcccccCccchhhhCCCCCeEeCchhhccCCccEEEEEE
Confidence            556688999887654 4668999986  33345799999876555567765   445667788877  456778999999


Q ss_pred             EEcCC
Q psy8771         272 AVNNL  276 (904)
Q Consensus       272 a~n~~  276 (904)
                      |..+.
T Consensus        85 A~~G~   89 (109)
T d2hyma1          85 GFSGN   89 (109)
T ss_dssp             EEETT
T ss_pred             EEcCC
Confidence            99753

>d1hyrc1 b.1.1.2 (C:181-274) Class I MHC homolog, alpha-3 domain {Human (Homo sapiens), Mic-a [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Class I MHC homolog, alpha-3 domain
species: Human (Homo sapiens), Mic-a [TaxId: 9606]

Probab=94.22  E-value=0.052  Score=41.47  Aligned_cols=58  Identities=24%  Similarity=0.516  Sum_probs=36.8

Q ss_pred             cCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCCc-----eeecceEEEEeee-----cCCeEEEEEEEe
Q psy8771         119 LDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDK-----LPVGRNVLTLDRV-----TESENYTCIAAS  177 (904)
Q Consensus       119 ~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~-----~~~~~~~l~i~~l-----~d~g~Y~c~a~n  177 (904)
                      .+..++|.|.+.|. |. ..|+|.++ |..+..+..     ....++++.+...     .+...|+|.+.-
T Consensus        14 ~~~~~~L~C~~~gFyP~~i~v~W~~~-g~~~~~~~~~~~~~~~~~~~ty~~~s~l~v~~~~~~~ytC~V~H   83 (94)
T d1hyrc1          14 SEGNITVTCRASGFYPWNITLSWRQD-GVSLSHDTQQWGDVLPDGNGTYQTWVATRICQGEEQRFTCYMEH   83 (94)
T ss_dssp             SSSEEEEEEEEEEEBSSCCEEEEEET-TEECCSTTSEECCCEECSSSCEEEEEEEEEETTCGGGEEEEEEE
T ss_pred             CCCCEEEEEEEEEEECCCcEEEEeEC-CeEcCCCeEEcCceEECCCCcEEEEEEEEEcCCCCCEEEEEEEE
Confidence            34668999999994 65 57999999 655543321     1223444444332     355679999974

>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Second domain of the Flt-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.13  Score=38.91  Aligned_cols=75  Identities=15%  Similarity=0.173  Sum_probs=53.1

Q ss_pred             eEEecCCCeEEEEEEccCCCCeE-EEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFV-KWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i-~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      +.+.+|+++.+-|.++ +|...+ .|..+++..++.+..+.. ...-+.|.++  .++|.|.|.|... |....+.+|..
T Consensus        15 V~v~eg~~~vIPC~vT-~P~~~VtL~~~~~~~~~p~g~~v~~Dpk~Gf~I~~~~~~~~g~y~C~a~~~-g~~~~S~yl~~   92 (95)
T d1fltx_          15 IHMTEGRELVIPCRVT-SPNITVTLKKFPLDTLIPDGKRIIWDSRKGFIISNATYKEIGLLTCEATVN-GHLYKTNYLTH   92 (95)
T ss_dssp             EEECTTSCEEECCCBS-CTTSCCEEEETTTEEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEE
T ss_pred             EEEeCCCCEEEEccCC-CCCceeEEEeccCCccCCCCCEEEECCCCCEEEeCCCcccCeEEEEEEEEC-CEEEEEEEEEE
Confidence            8899999999999998 566555 466664555555555553 4557888887  6899999999754 44444555554


Q ss_pred             E
Q psy8771         191 Q  191 (904)
Q Consensus       191 ~  191 (904)
                      +
T Consensus        93 r   93 (95)
T d1fltx_          93 R   93 (95)
T ss_dssp             E
T ss_pred             e
Confidence            4

>d1f6fb1 b.1.2.1 (B:5-100) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.19  E-value=0.047  Score=41.92  Aligned_cols=85  Identities=19%  Similarity=0.238  Sum_probs=57.0

Q ss_pred             CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEEE--cCCCCCCeEEEEEEE
Q psy8771         484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTTI--SDLTPHTIYTIRVQA  558 (904)
Q Consensus       484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~L~p~t~Y~~~V~a  558 (904)
                      .|.+++....+...++.+|++..+.+ ....|.+.|+.....   .|..-.   .....++.+  ..+.....|.|.|+|
T Consensus         2 kP~~~sC~s~~~~~~~C~W~~G~~t~-L~T~Y~l~~~~~~~~---~~~eCp~y~~~~~~~C~f~~~~~~~~~~y~i~V~a   77 (96)
T d1f6fb1           2 KPEIHKCRSPDKETFTCWWNPGTDGG-LPTNYSLTYSKEGEK---TTYECPDYKTSGPNSCFFSKQYTSIWKIYIITVNA   77 (96)
T ss_dssp             CCEEEEEEBSSSSCEEEEEECCCCTT-SCCEEEEEEEETTEE---EEEECSCSSTTCTTEEEECTTTCCSSCEEEEEEEE
T ss_pred             CCeEeEEEeCCCCEEEEEeeCCCcCC-cCceEEEEEEecCCC---ccccCCcccCCCceeEEECCccCccceEEEEEEEE
Confidence            57788888888889999999954332 347899999865422   222211   133345555  456678899999999


Q ss_pred             EeCCCCCCCCCcEEE
Q psy8771         559 FTSVGPGPLSAPVLV  573 (904)
Q Consensus       559 ~~~~g~~~~S~~~~~  573 (904)
                      .|..|.. .|+.+.+
T Consensus        78 ~N~LG~~-~Sd~l~~   91 (96)
T d1f6fb1          78 TNQMGSS-SSDPLYV   91 (96)
T ss_dssp             EETTEEE-ECCCEEE
T ss_pred             EcCCCCc-ccccEEE
Confidence            9998853 4555444

>d1dn0b1 b.1.1.1 (B:1-120) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 2.1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 2.1 [TaxId: 9606]

Probab=94.11  E-value=0.09  Score=41.42  Aligned_cols=60  Identities=17%  Similarity=0.419  Sum_probs=41.0

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEeeCC-ccc------cCC----------CCceeec------ceEEEEeee--cC
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRKGQ-NIE------LTP----------DDKLPVG------RNVLTLDRV--TE  167 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~-~~~------~~~----------~~~~~~~------~~~l~i~~l--~d  167 (904)
                      -.+.+|++++|.|+++|....  .+.|++.. |..      +..          ..|+.+.      ...|.|++|  +|
T Consensus        10 ~~vkPG~sl~LsC~~SG~~~~~y~~~W~RQ~PGkglewv~~i~~~~~~~y~~~~kgRftiS~D~s~nt~~L~i~~l~~eD   89 (120)
T d1dn0b1          10 GLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAAD   89 (120)
T ss_dssp             CEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred             cEECCCCCEEEEEEEccccCccCcceeeeECCCccceeeeeccccccchhccceeeeeEEeccCchheeccccccccccc
Confidence            457889999999999997653  57899721 211      111          1345431      235999999  69


Q ss_pred             CeEEEEE
Q psy8771         168 SENYTCI  174 (904)
Q Consensus       168 ~g~Y~c~  174 (904)
                      .+.|.|.
T Consensus        90 tA~YYCA   96 (120)
T d1dn0b1          90 TAVYYCA   96 (120)
T ss_dssp             CEEEEEE
T ss_pred             ccEEEEE
Confidence            9999994

>d2hfta1 b.1.2.1 (A:1-106) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.98  E-value=0.21  Score=38.63  Aligned_cols=77  Identities=12%  Similarity=0.305  Sum_probs=54.2

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcC-C--CCCCeEEEEEEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISD-L--TPHTIYTIRVQA  558 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-L--~p~t~Y~~~V~a  558 (904)
                      ..|.|+++...+ -...|.|+++..    -..|.|+|+..+    ..|...-. ...+.+.|.+ +  .....|.+||+|
T Consensus         7 ~~p~NV~~~S~N-f~~iL~W~p~~~----~~~YtVqy~~~~----~~W~~~C~nit~~~CDlt~~~~~d~~~~Y~aRVrA   77 (106)
T d2hfta1           7 VAAYNLTWKSTN-FKTILEWEPKPV----NQVYTVQISTKS----GDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFS   77 (106)
T ss_dssp             CCCEEEEEEEET-TEEEEEEECCCS----SEEEEEEEEETT----SCCEEEEEEESCSEEECHHHHGGGTTSCEEEEEEE
T ss_pred             ccceEEEEEEEc-CeEEEEECCCCC----CEEEEEEEEEcC----CchhhcccCcCccccccccccccCCCCCEEEEEEE
Confidence            478899998877 578899998532    256999998765    34654321 4556788864 2  456789999999


Q ss_pred             EeCCCCCCCC
Q psy8771         559 FTSVGPGPLS  568 (904)
Q Consensus       559 ~~~~g~~~~S  568 (904)
                      ..+.+.+.++
T Consensus        78 ~~~~~~S~~~   87 (106)
T d2hfta1          78 YPAGNVESTG   87 (106)
T ss_dssp             EECSSCCCC-
T ss_pred             EcCCCccccc
Confidence            9887665443

>d1kxvc_ b.1.1.1 (C:) Camelid IG heavy chain variable domain, VHh {Camel (Camelus dromedarius) [TaxId: 9838]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Camelid IG heavy chain variable domain, VHh
species: Camel (Camelus dromedarius) [TaxId: 9838]

Probab=93.94  E-value=0.061  Score=42.41  Aligned_cols=63  Identities=19%  Similarity=0.410  Sum_probs=42.4

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cc--c----cCC----------CCceeec------ceEEEEeee--cC
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NI--E----LTP----------DDKLPVG------RNVLTLDRV--TE  167 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~--~----~~~----------~~~~~~~------~~~l~i~~l--~d  167 (904)
                      -.+.+|++++|.|.++|...  ..+.|++-. |.  +    +..          ..|+.+.      ...|.|++|  +|
T Consensus         9 ~~vkPg~sl~LsC~~SG~~~s~y~~~W~RQ~pGkglewl~~i~~~g~~~y~~~~kgR~tiS~D~s~~~~~L~i~~L~~eD   88 (119)
T d1kxvc_           9 GTVPAGGSLRLSCAASGNTLCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQGNAKNTAYLQMDSLKPDD   88 (119)
T ss_dssp             EEECTTCCEEEEEEEESCTTCCEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEECSSTTEEEEEECSCCGGG
T ss_pred             ceECCCCCeEEEEEEcCCCccCCceeeeeeCCCCcceeeeecccccchhhhhhhhcceEEecccCCcceecccccCCcCC
Confidence            56789999999999999764  357898731 11  1    111          1244431      126999999  79


Q ss_pred             CeEEEEEEEe
Q psy8771         168 SENYTCIAAS  177 (904)
Q Consensus       168 ~g~Y~c~a~n  177 (904)
                      ...|.|....
T Consensus        89 tA~YYCAr~~   98 (119)
T d1kxvc_          89 TAMYYCKPSL   98 (119)
T ss_dssp             CEEEEEEEEE
T ss_pred             cceEeeeecc
Confidence            9999996543

>d1mjul2 b.1.1.2 (L:108-214) Immunoglobulin light chain kappa constant domain, CL-kappa {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin light chain kappa constant domain, CL-kappa
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.93  E-value=0.081  Score=41.56  Aligned_cols=60  Identities=17%  Similarity=0.233  Sum_probs=38.3

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCce-----eecceEEEEeee--------cCCeEEEEEEEecC
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDKL-----PVGRNVLTLDRV--------TESENYTCIAASVL  179 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~~-----~~~~~~l~i~~l--------~d~g~Y~c~a~n~~  179 (904)
                      .+..++|.|.+.| .|. ..|+|.++ |..+......     ...++.+.+...        ..+..|+|.+....
T Consensus        19 ~~~~~tL~Cl~~~f~P~~i~v~W~~n-g~~~~~~~~~~~~~~~~~dgtys~~S~L~v~~~~W~~g~~ytC~V~H~~   93 (107)
T d1mjul2          19 TSGGASVVCFLNNFYPKDINVKWKID-GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT   93 (107)
T ss_dssp             TTTEEEEEEEEEEEBSSCCEEEEEET-TEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTT
T ss_pred             cCCceEEEEEEEEeECCCCEEEEEEC-CEEccCCeEeccccEecCCCCEEEEEEEEECHHHhCCCCEEEEEEEECC
Confidence            4667999999998 455 57999999 6655443211     123444444322        25788999998543

>d3d85d1 b.1.1.4 (D:1-87) The p40 domain of interleukin-12 (IL-12 beta chain), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: The p40 domain of interleukin-12 (IL-12 beta chain), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.90  E-value=0.072  Score=38.08  Aligned_cols=62  Identities=16%  Similarity=0.329  Sum_probs=35.3

Q ss_pred             cCCCeEEEEEEccCCC-CeEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEEEEEecCcceEEEEEEEE
Q psy8771         119 LDSPLNLSCVAVGSPM-PFVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKV  190 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p~-p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c~a~n~~g~~~~~~~l~v  190 (904)
                      .|+.+.|.|   |.|. -.|.|.|++...+...    ...-++.+....++|.|+|. .  .|+.-.-..|.+
T Consensus        20 ~~~~V~L~C---~t~eE~~I~W~kd~~se~~~~----GntltV~VkE~~~aGnYTCh-k--~g~~Lnht~lLi   82 (87)
T d3d85d1          20 PGEMVVLTC---DTPEEDGITWTLDQSSEVLGS----GKTLTIQVKEFGDAGQYTCH-K--GGEVLSHSLLLL   82 (87)
T ss_dssp             CCEEEEEEC---SSSCCSSCEEEETTCCCCCEE----SSEEEEEECSGGGCEEEEEE-E--TTEEEEEEEEEE
T ss_pred             CccEEEEec---CCCcccccEEeeCCccccccC----CCEEEEEEEeccCCcceeEe-C--CCcEeeeEEEEE
Confidence            355788888   4443 3599999944333211    11123445556799999996 3  366444333333

>d1mqkh_ b.1.1.1 (H:) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]

Probab=93.83  E-value=0.087  Score=41.61  Aligned_cols=63  Identities=19%  Similarity=0.390  Sum_probs=42.0

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cc--c----cCC-----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NI--E----LTP-----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~--~----~~~-----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+.++|.|+++|...  -.+.|.+.. |.  +    +..           ..|+.+.      ...|.|.+|  +
T Consensus        10 ~lvkPG~sl~LsC~~SG~s~~~y~~~WvRQ~PGkglewl~~i~~~~~~~~y~~s~kgR~tis~D~s~nt~~L~i~~L~~e   89 (123)
T d1mqkh_          10 DLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVASINNGGGRTYYPDTVKGRFTISRDNAKNTLYLQMSSLKSE   89 (123)
T ss_dssp             CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCTTTBTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEECcccCcCCceEeeecCCCcceeeeeecCccccccccchhccEEEEEEecCcccccccceeeeccC
Confidence            56779999999999999764  357898721 11  1    111           1234331      235899999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |.+.|.|....
T Consensus        90 DtAvYYCAr~~  100 (123)
T d1mqkh_          90 DTAMYYCVRHE  100 (123)
T ss_dssp             GCEEEEEEEEE
T ss_pred             cccceeEEecC
Confidence            99999997654

>d1yjdc1 b.1.1.1 (C:1-118) CD28 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: CD28
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.086  Score=42.35  Aligned_cols=63  Identities=19%  Similarity=0.333  Sum_probs=38.8

Q ss_pred             eEEecCCCeEEEEEEccCCCC--e-EEEeeCCccccC---------------CCCceee------cceEEEEeee--cCC
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--F-VKWRKGQNIELT---------------PDDKLPV------GRNVLTLDRV--TES  168 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~-i~W~k~~~~~~~---------------~~~~~~~------~~~~l~i~~l--~d~  168 (904)
                      ..+..|+.++|.|...+....  . +-|++..+..++               ...++..      +..+|.|.+|  +|+
T Consensus        10 ~~v~~g~svtL~C~~s~~~~~~~~~~w~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~l~~~Ds   89 (118)
T d1yjdc1          10 MLVAYDNAVNLSCKYSYNLFSREFRASLHKGLDSAVEVCVVYGNYSQQLQVYSKTGFNCDGKLGNESVTFYLQNLYVNQT   89 (118)
T ss_dssp             EEECBTTBEEEEEEESCCSSCSEEEEEEEESTTCCCEEEEEEEESSSCCEEECSSSCEEEEEECSSEEEEEEESCCGGGC
T ss_pred             cEEeCCCCEEEEEEEecCCCCccEEEEEEECCCCccEEEEEEeCCCeEECCccCCcEEEEEECCCCeEEEEECCCCcccC
Confidence            446689999999999866433  2 345553222110               0112221      2237999999  799


Q ss_pred             eEEEEEEEe
Q psy8771         169 ENYTCIAAS  177 (904)
Q Consensus       169 g~Y~c~a~n  177 (904)
                      +.|.|.+..
T Consensus        90 avYyCa~~~   98 (118)
T d1yjdc1          90 DIYFCKIEV   98 (118)
T ss_dssp             EEEEEEEEE
T ss_pred             eEEEEEEec
Confidence            999998754

>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

Probab=93.74  E-value=0.021  Score=43.58  Aligned_cols=34  Identities=9%  Similarity=0.234  Sum_probs=28.3

Q ss_pred             eecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         247 ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       247 ~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ........|.|.++.+.+.+.|+|.|.|..|...
T Consensus        49 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~G~~~   82 (91)
T d1tnna_          49 TTTKYKSTFEISSVQASDEGNYSVVVENSEGKQE   82 (91)
T ss_dssp             EECSSEEEEECSSCCSCCCEEEEEECBCSSCBCC
T ss_pred             eeecceeEEeecCCCHHHCEEEEEEEEECCCEEE
Confidence            3344457899999999999999999999998753

>d1mjuh2 b.1.1.2 (H:114-230) Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.73  E-value=0.067  Score=41.57  Aligned_cols=63  Identities=22%  Similarity=0.344  Sum_probs=34.3

Q ss_pred             ecCCCeEEEEEEcc-CCC-CeEEEeeCCccccC-CCCceeecceEEEEee------ec-CCeEEEEEEEecCcc
Q psy8771         118 MLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELT-PDDKLPVGRNVLTLDR------VT-ESENYTCIAASVLGV  181 (904)
Q Consensus       118 ~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~-~~~~~~~~~~~l~i~~------l~-d~g~Y~c~a~n~~g~  181 (904)
                      ..++.++|.|.+.| .|. ..|+|.++ +.... ........++.+.+..      -+ .++.|+|.+....+.
T Consensus        18 ~~~~~~~l~Cl~~gf~P~~i~v~W~~~-~~~~~~~~~~~~~~~g~ys~~S~L~v~~~~w~~~~ytC~V~H~~~~   90 (102)
T d1mjuh2          18 TSGSSVTLGCLVKGYFPEPVTLTWNSG-SLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASS   90 (102)
T ss_dssp             ----CEEEEEEEEEEBSSCCEEEEGGG-TBCTTEEECCCEEETTEEEEEEEEEECTTTTTTSCCEEEEEEGGGT
T ss_pred             cCCCcEEEEEEEeeeeCCCeEEEECcC-CccCCeEecccccCCCCEEEEEEEEEehhHcCCceEEEEEEECCCC
Confidence            35789999999999 454 47999776 32211 0011112334443322      22 357899999875544

>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=93.66  E-value=0.021  Score=43.83  Aligned_cols=32  Identities=16%  Similarity=0.080  Sum_probs=27.2

Q ss_pred             ecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      .......+.|.+++..+.+.|+|.|.|..|..
T Consensus        53 ~~~~~~~L~I~~~~~~D~G~Y~c~a~N~~G~~   84 (93)
T d1wiua_          53 AKSSTTSIFFPSAKRADSGNYKLKVKNELGED   84 (93)
T ss_dssp             EETTEEEEECTTBCGGGCEEEEEEEEETTEEE
T ss_pred             ccccceeeccccccccccEEEEEEEEECCCEE
Confidence            33445679999999999999999999999864

>d1iqdb1 b.1.1.1 (B:1-114) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=93.64  E-value=0.042  Score=43.11  Aligned_cols=63  Identities=14%  Similarity=0.325  Sum_probs=42.2

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----c-CC----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----L-TP----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~-~~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|+++|...  -.+.|++  .+ +.+    + ..          ..|+.+.      ...|.|.+|  +
T Consensus        10 ~~~kPg~sv~LsC~~SG~s~~~y~~~W~RQ~PGkglEwlg~i~~~~~~~~y~~~~~gR~tiS~D~s~~t~~L~i~~L~~e   89 (117)
T d1iqdb1          10 EVKKPGASVKVSCKVSGYTLTELPVHWVRQAPGKGLEWVGSFDPESGESIYAREFQGSVTMTADTSTNIAYMELSSLRSD   89 (117)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCCCCCEEEEEECCCCceeeeeecCCccccceecceeeeeeeeecccccceEEEeecccCcC
Confidence            56788999999999999754  4578987  21 111    1 11          1233331      235999999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |.+.|.|....
T Consensus        90 DtAvYYCA~~~  100 (117)
T d1iqdb1          90 DTAVYYCAVPD  100 (117)
T ss_dssp             GCEEEEEEECS
T ss_pred             cceEEEEeEcC
Confidence            99999997644

>d1c5db1 b.1.1.1 (B:1-117) Immunoglobulin heavy chain variable domain, VH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.60  E-value=0.14  Score=40.00  Aligned_cols=62  Identities=21%  Similarity=0.443  Sum_probs=42.0

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cccc------CC----------CCceeec------ceEEEEeee--cC
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NIEL------TP----------DDKLPVG------RNVLTLDRV--TE  167 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~~~------~~----------~~~~~~~------~~~l~i~~l--~d  167 (904)
                      -.+.+|++++|.|+++|...  -.+.|.+.- |..+      ..          ..|+.+.      ...|.|++|  +|
T Consensus        10 ~lvkPg~sl~LsC~~SG~~~~~~~~~W~RQ~PGkglewi~~i~~~~~~~y~~s~kgRftiS~D~s~n~~~L~~~sL~~eD   89 (117)
T d1c5db1          10 GLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTED   89 (117)
T ss_dssp             SEECTTSCEEEEEEECSSCTTTCCEEEEEECTTSCCEEEEEECTTCCEEECTTTSSSEEEEEETTTTEEEEEECSCCGGG
T ss_pred             ceECCCCCeEEEEEEcCCCccCCceEcccCCCCcceeeeeccccccccccccccccceEEecccccceeeccccccccCc
Confidence            56789999999999999765  358898720 2111      11          1244431      236999999  69


Q ss_pred             CeEEEEEEE
Q psy8771         168 SENYTCIAA  176 (904)
Q Consensus       168 ~g~Y~c~a~  176 (904)
                      .+.|.|...
T Consensus        90 tAvYYCAr~   98 (117)
T d1c5db1          90 TAIYFCTRE   98 (117)
T ss_dssp             CEEEEEEEC
T ss_pred             ceEEEEecc
Confidence            999999543

>d2c4fu1 b.1.2.1 (U:91-210) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.58  E-value=0.077  Score=42.20  Aligned_cols=68  Identities=16%  Similarity=0.184  Sum_probs=48.2

Q ss_pred             CCCcceEEEeeccceEEEeccCCCC----CCC---------ceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEE
Q psy8771         622 AKPRDLRAVDIQETAVTLAWSKPTH----SGE---------NIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLY  688 (904)
Q Consensus       622 ~~p~~l~~~~~~~~~~~l~w~~~~~----~~~---------~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y  688 (904)
                      +|| .+........+|.|.-.+|..    .+.         ....|.|.|+..+....      ......|.+|.|++.|
T Consensus        19 GPP-~v~~~~~~~~sl~V~i~~P~t~~~~~~~~~~~~d~~~~~l~Y~V~~w~~~s~~~------~~~~~~l~~L~p~t~Y   91 (116)
T d2c4fu1          19 GQP-TIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWSGKKTAK------TNTNEFLIDVDKGENY   91 (116)
T ss_dssp             CCC-CEEEEEEETTEEEEEECCCEEEEESSSCEEEHHHHHGGGCEEEEEECCCCEEEE------ESSSEEEEECCTTCCC
T ss_pred             CCc-eEEEEecCCCEEEEEEeCCCCcccCCCceeehhhhccCCcEEEEEEEECCceEE------EeeeEEEeCCCCCCcE
Confidence            444 566666667888888888741    111         13579999997654321      3456789999999999


Q ss_pred             EEEEEEEc
Q psy8771         689 YIWLAAQS  696 (904)
Q Consensus       689 ~v~V~a~~  696 (904)
                      .|+|+|+-
T Consensus        92 Cv~Vqa~i   99 (116)
T d2c4fu1          92 CFSVQAVI   99 (116)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEEe
Confidence            99999983

>d1c5cl2 b.1.1.2 (L:108-214) Immunoglobulin light chain kappa constant domain, CL-kappa {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin light chain kappa constant domain, CL-kappa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.11  Score=40.88  Aligned_cols=60  Identities=13%  Similarity=0.259  Sum_probs=38.1

Q ss_pred             cCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCCcee-----ecceEEEEeee--------cCCeEEEEEEEecC
Q psy8771         119 LDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDKLP-----VGRNVLTLDRV--------TESENYTCIAASVL  179 (904)
Q Consensus       119 ~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~~~-----~~~~~l~i~~l--------~d~g~Y~c~a~n~~  179 (904)
                      .++.++|.|.+.|. |. ..|+|.+| |..+.......     ..++.+.+...        ..+..|+|.+....
T Consensus        19 ~~~~~~L~Clv~~f~P~~i~v~W~~n-g~~~~~~~~~~~~~~~~~dgtys~~S~L~v~~~~W~~~~~ytC~V~H~~   93 (107)
T d1c5cl2          19 KSGTASVVCLLNNFYPREAKVQWKVD-NALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG   93 (107)
T ss_dssp             HTTEEEEEEEEEEEBSSCCEEEEEET-TEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTT
T ss_pred             cCCceEEEEEEEEeeCCCCEEEEEEC-CEECCCCEEEecccccCCCCcEEEEEEEEECHHHhCCCCEEEEEEEECC
Confidence            35789999999994 65 47999999 55554332211     12444443322        35678999998643

>d2hfta1 b.1.2.1 (A:1-106) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.51  E-value=0.2  Score=38.71  Aligned_cols=52  Identities=12%  Similarity=0.010  Sum_probs=33.9

Q ss_pred             eeEEEEEEeCCccccceEEecccceEEEeC-C--CCCcEEEEEEEEEcCCCCCCC
Q psy8771         652 ISYELYWNDTYAKAKHHRRIGLVETYSLTG-L--YPNTLYYIWLAAQSPRGEGAT  703 (904)
Q Consensus       652 ~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~-L--~p~t~Y~v~V~a~~~~G~~~~  703 (904)
                      ..|.|+|...++.....-.......+.|.+ +  .....|.+||+|....+.+..
T Consensus        32 ~~YtVqy~~~~~~W~~~C~nit~~~CDlt~~~~~d~~~~Y~aRVrA~~~~~~S~~   86 (106)
T d2hfta1          32 QVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVEST   86 (106)
T ss_dssp             EEEEEEEEETTSCCEEEEEEESCSEEECHHHHGGGTTSCEEEEEEEEECSSCCCC
T ss_pred             EEEEEEEEEcCCchhhcccCcCccccccccccccCCCCCEEEEEEEEcCCCcccc
Confidence            568899887654322222233456777764 2  356789999999987666544

>d1cqka_ b.1.1.2 (A:) Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.46  E-value=0.045  Score=42.56  Aligned_cols=58  Identities=12%  Similarity=0.195  Sum_probs=37.2

Q ss_pred             CCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCC---ceeecceEEEEeee--------cCCeEEEEEEEec
Q psy8771         120 DSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDD---KLPVGRNVLTLDRV--------TESENYTCIAASV  178 (904)
Q Consensus       120 g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~---~~~~~~~~l~i~~l--------~d~g~Y~c~a~n~  178 (904)
                      .+.++|.|.+.| .|. ..|+|.++ |..+....   -....++.+.+...        ..+..|+|.+...
T Consensus        18 ~~~~tL~C~v~~f~P~~i~v~W~~~-g~~~~~~~~~~~~~~~dgtys~~S~L~v~~~~w~~~~~ytC~V~H~   88 (101)
T d1cqka_          18 KDLVSLTCMITDFFPEDITVEWQWN-GQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHE   88 (101)
T ss_dssp             SSEEEEEEEEEEEBSSCCEEEEEET-TEECCSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECT
T ss_pred             CCcEEEEEEEEEeECCCcEEEEEEC-CEEccCcEEeeeecCCCCcEEEEEEEEECHHHhCCCCEEEEEEEEC
Confidence            467899999999 465 57999999 55543211   12224454444332        3578899999753

>d1jpth1 b.1.1.1 (H:1-117) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Engineered (including hybrid species)

Probab=93.45  E-value=0.048  Score=42.62  Aligned_cols=62  Identities=21%  Similarity=0.442  Sum_probs=41.9

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cc--c----cC-C----------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NI--E----LT-P----------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~--~----~~-~----------~~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|...  -.+.|.+.- |.  +    +. .          ..|+.+      +...|.|.+|  +
T Consensus        10 ~~vkpg~sl~LsC~~SG~~~~~y~~~WvRQ~PGkglewvg~i~~~~~~~~ya~s~kgR~tiSrD~s~nt~yL~m~~L~~e   89 (117)
T d1jpth1          10 GLVQPGGSLRLSCAASGFNIKEYYMHWVRQAPGKGLEWVGLIDPEQGNTIYDPKFQDRATISADNSKNTAYLQMNSLRAE   89 (117)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECTTTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCcCCceEcceeCCCcceEeeeecccccccccccccceeeEEEEeccccceEEecccccCCC
Confidence            67789999999999999764  468888721 11  1    11 1          123333      1235888999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DTAvYYCAr~   99 (117)
T d1jpth1          90 DTAVYYCARD   99 (117)
T ss_dssp             GCEEEEEEEE
T ss_pred             CceEEEEeec
Confidence            9999999654

>d1vgeh1 b.1.1.1 (H:1-122) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=93.40  E-value=0.079  Score=41.78  Aligned_cols=63  Identities=13%  Similarity=0.282  Sum_probs=42.8

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-ccc------cC-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NIE------LT-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~~------~~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|+++|...  -.+.|.+.. |..      +. .          ..|+.+.      ...|.|.+|  +
T Consensus        11 ~~vkpg~sl~LsC~~SG~~~~~y~~~WvRQ~PGkglEwlg~i~~~~~~~~ya~s~kgR~tiS~D~s~ntvyL~~~~L~~e   90 (122)
T d1vgeh1          11 EVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPE   90 (122)
T ss_dssp             EEECTTCCEEEEEEECSSCGGGSEEEEEEECTTSCEEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             cEECCCCCEEEEEEEcCCCccCCCceeeEeCCCCceeeeeeecCcccccccccceeEeeEEeccCCcceeeecccccCCC
Confidence            67889999999999999765  458899721 111      11 1          1344331      225889999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |.+.|.|....
T Consensus        91 DtA~YYCAr~~  101 (122)
T d1vgeh1          91 DTAVYYCARDP  101 (122)
T ss_dssp             GCEEEEEEEET
T ss_pred             cceEEEEeecC
Confidence            99999997653

>d1f3dh1 b.1.1.1 (H:1-121) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=93.40  E-value=0.037  Score=43.46  Aligned_cols=61  Identities=21%  Similarity=0.383  Sum_probs=40.7

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----cC-CC----------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----LT-PD----------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~~-~~----------~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|.++|...  ..+.|++  .+ +.+    +. .+          .|+.+.      ...|.|++|  +
T Consensus        10 ~~~kPG~sl~LsC~~SG~s~~~y~~~W~RQ~PGkglewl~~i~~~~~~~~y~~~~~gRftis~D~s~~t~~L~i~~l~~e   89 (115)
T d1f3dh1          10 ELVKPGASVKVSCKASGYSFIDYNIHWVKQSHGKSLEWIGYIVPYSGGTTFNQKFKGKATLTVDKSSSTAFMHLNSLTFE   89 (115)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             cEECCCCCEEEEEEEccccCCCCCcceeEEcCCCccEEeeccCCCCCcccccceeeEEEEEeeccCceeeEeeeeecCcC
Confidence            55789999999999998743  4588987  21 111    11 11          234331      235999999  7


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        90 DtAvYYCAr   98 (115)
T d1f3dh1          90 DSAVYYCAN   98 (115)
T ss_dssp             GCEEEEEEE
T ss_pred             CcEEEEEec
Confidence            999999953

>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Twitchin
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=93.34  E-value=0.025  Score=43.82  Aligned_cols=38  Identities=13%  Similarity=-0.015  Sum_probs=29.6

Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEE
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVI  287 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~  287 (904)
                      .....|.|.++...+.+.|+|.|.|..|....+..+.+
T Consensus        54 ~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V   91 (97)
T d1koaa1          54 GNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV   91 (97)
T ss_dssp             TTEEEEEESCCCSGGGSCEEEEEEETTEEEEEEECCEE
T ss_pred             CCeeEEEeCCCceecCEEEEEEEEECCCEEEEEEEEEE
Confidence            44567999999999999999999999987543333333

>d1nlbh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 4 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 4 [TaxId: 10090]

Probab=93.33  E-value=0.046  Score=42.81  Aligned_cols=60  Identities=13%  Similarity=0.329  Sum_probs=40.5

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cc--c----cC-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NI--E----LT-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~--~----~~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|.++|...  ..+.|.+-- |.  +    +. .          ..|+.+.      .-.|.|.+|  +
T Consensus        10 ~~~kPG~sl~LsC~~SG~s~~~y~~~WvRQ~PGkglEwvg~i~~~~~~~~ya~~~kgRftisrD~s~~tvyL~~~~L~~e   89 (118)
T d1nlbh1          10 ELKKPGETVKISCKASGYTFTDFSMHWVNQAPGKGLNWMGWVNTETGEPTYADDFKGRFAFSLETSASTAYLQINSLKNE   89 (118)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCCCCceeccccCCCccceeeeecCcccccchhhhheeeeeEEEecCCceeEEeeeeecccC
Confidence            56789999999999999764  458898721 11  1    11 1          1233331      125889999  7


Q ss_pred             CCeEEEEE
Q psy8771         167 ESENYTCI  174 (904)
Q Consensus       167 d~g~Y~c~  174 (904)
                      |.+.|.|.
T Consensus        90 DtAvYYCA   97 (118)
T d1nlbh1          90 DTATYFCA   97 (118)
T ss_dssp             GCEEEEEE
T ss_pred             cceEEEEe
Confidence            99999994

>d1qnzh_ b.1.1.1 (H:) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=93.31  E-value=0.06  Score=42.64  Aligned_cols=61  Identities=23%  Similarity=0.382  Sum_probs=40.9

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----cC-C----------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----LT-P----------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~~-~----------~~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|.++|...  -.+.|++  .+ +.+    +. .          ..|+.+      +...|.|.+|  +
T Consensus        10 ~~~kpG~Sv~LsC~~SG~s~~~y~~~WyRQ~PGkgle~l~~i~~~~~~~~y~~~~~gR~tis~d~s~~~~~L~i~~L~~e   89 (119)
T d1qnzh_          10 ELVKPGASVKMSCKASGYTFTTYPIEWMKQNHGKSLEWIGNFHPYSDDTNYNEKFKGKAKLTVEKSSSTVYLEFSRLTSD   89 (119)
T ss_dssp             CEECTTEEEEEEEEEETCCSSSSCEEEEEEETTSCCEEEEEEETTTTEECCCTTTTTTEEEEEETTTTEEEEEEEEECGG
T ss_pred             ceECCCCCEEEEEEEeccCCCCCCcceeeecCCCcceEeeccCCcccccchhhhhcccceeecccccceeeeeecccCcc
Confidence            46778999999999998653  3588987  31 111    11 1          124443      1235999999  6


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        90 DsAvYYCA~   98 (119)
T d1qnzh_          90 DSAVYYCAI   98 (119)
T ss_dssp             GCEEEEEEE
T ss_pred             ceeEEEEEE
Confidence            999999954

>d1jnhb1 b.1.1.1 (B:1-117) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=93.30  E-value=0.057  Score=42.24  Aligned_cols=61  Identities=21%  Similarity=0.417  Sum_probs=41.3

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--C-Cccc----cC-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--G-QNIE----LT-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~-~~~~----~~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|....  .+.|.+  . ++.+    +. .          ..|+.+.      ...|.|++|  +
T Consensus        10 ~~~kpg~sl~lsC~~SG~~~~~y~~~WvRQ~PGkglewvg~i~~~~~~t~ya~s~kgRfTiS~D~s~~t~yLq~~~L~~e   89 (117)
T d1jnhb1          10 ELARPGASVKLSCRTSGYSFTTYWMQWVRQRPGQGLEWIAAIYPGDDDARYTQKFKGKATLTADRSSSIVYLQLNSLTSE   89 (117)
T ss_dssp             EECCTTCCEEEEEEEESSCSSSSEEEEEEECTTSCEEEEEEEEGGGTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCCCCceeeeeeCCCCcceeeeccCccccccccccceeEEEEEeccCccceeeecccccCCC
Confidence            556789999999999997654  678987  2 1111    11 1          1344431      235889999  6


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        90 DTAvYYCAr   98 (117)
T d1jnhb1          90 DSAVYSCSR   98 (117)
T ss_dssp             GCEEEEEEE
T ss_pred             cceEEEEee
Confidence            999999954

>d2fbjh1 b.1.1.1 (H:1-118) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]

Probab=93.19  E-value=0.07  Score=41.88  Aligned_cols=65  Identities=23%  Similarity=0.414  Sum_probs=43.1

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEeeCC-cc--c----cC-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRKGQ-NI--E----LT-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~-~~--~----~~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|+++|....  .+.|.+-. |.  +    +. .          ..|+.+.      .-.|.|++|  +
T Consensus        10 ~~vkpg~sl~LsC~~SG~~~s~y~~~WvRQ~PGkglEwv~~i~~~~~~~~Y~~s~kgRftiSrD~s~nt~~L~~~sL~~e   89 (118)
T d2fbjh1          10 GLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSE   89 (118)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEECCccccCCceeeeeecCCcceeeeeecCcccccccccccceeeEEEeecCccceeeccccccCCC
Confidence            567899999999999997653  57888621 11  1    11 1          1234331      235889999  6


Q ss_pred             CCeEEEEEEEecC
Q psy8771         167 ESENYTCIAASVL  179 (904)
Q Consensus       167 d~g~Y~c~a~n~~  179 (904)
                      |.+.|.|......
T Consensus        90 DtAvYYCAr~~~~  102 (118)
T d2fbjh1          90 DTALYYCARLHYY  102 (118)
T ss_dssp             GCEEEEEEEEETT
T ss_pred             cceEEEeeEecCC
Confidence            9999999765543

>d1k5na1 b.1.1.2 (A:182-276) Class I MHC, alpha-3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Class I MHC, alpha-3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.12  E-value=0.066  Score=40.94  Aligned_cols=58  Identities=28%  Similarity=0.483  Sum_probs=35.1

Q ss_pred             cCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCC----ceeecceEEEEee---e--cCCeEEEEEEEe
Q psy8771         119 LDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDD----KLPVGRNVLTLDR---V--TESENYTCIAAS  177 (904)
Q Consensus       119 ~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~----~~~~~~~~l~i~~---l--~d~g~Y~c~a~n  177 (904)
                      .+..++|.|.+.|. |. ..|+|.++ |..+..+.    ....+++.+.+..   +  .+...|+|.+.-
T Consensus        14 ~~~~~~L~C~~~gFyP~~i~vtW~~~-g~~~~~~~~~~~~~~~~~~~~~~~s~l~v~~~~~~~ytC~V~H   82 (95)
T d1k5na1          14 SDHEATLRCWALGFYPAEITLTWQRD-GEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQH   82 (95)
T ss_dssp             ETTEEEEEEEEEEEBSSCCEEEEEET-TEECGGGCEECCCEECSSSCEEEEEEEEEETTCGGGEEEEEEC
T ss_pred             CCCCEEEEEEEEeEeCCCCEEEEEEC-CEEcCCCceeccEEcCCCCeEEEEEEEEEEcCCCCEEEEEEEE
Confidence            35679999999995 43 47899999 55443321    1222333222221   2  355679998874

>d2ck0h1 b.1.1.1 (H:1-106) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 1 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 1 [TaxId: 10090]

Probab=93.06  E-value=0.12  Score=39.87  Aligned_cols=62  Identities=21%  Similarity=0.448  Sum_probs=42.0

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--CC-ccc----cCC-------------CCceeec------ceEEEEeee-
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--GQ-NIE----LTP-------------DDKLPVG------RNVLTLDRV-  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~~-~~~----~~~-------------~~~~~~~------~~~l~i~~l-  165 (904)
                      -.+.+|++++|.|+++|....  .+.|.+  .+ +.+    +..             ..|+.+.      ...|.|++| 
T Consensus        10 ~~vkPG~Sl~LsC~~SG~t~~~~~~~WvRQ~PGkglEw~g~i~~~~~~~~~~ya~~~kgR~tiS~D~s~~t~~L~i~sL~   89 (109)
T d2ck0h1          10 GLVQPRGSLKLSCAASGFTFNTDAMNWVRQAPGKGLEWVARIRSKGFNFATYYADSVRDRFTISRDDSQSMLYLQMNNLK   89 (109)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECCGGGTTCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred             CeECCCCCeEEEEEECCCcccccccccceeCCCcceecccccccccccccceeccccccCceeccccccceeEecccCCC
Confidence            677899999999999987653  588887  21 111    110             1244431      236889999 


Q ss_pred             -cCCeEEEEEEE
Q psy8771         166 -TESENYTCIAA  176 (904)
Q Consensus       166 -~d~g~Y~c~a~  176 (904)
                       +|.+.|.|.-.
T Consensus        90 ~eDTAvYYCAr~  101 (109)
T d2ck0h1          90 TEDTGIYYCVRG  101 (109)
T ss_dssp             GGGCEEEEEEEE
T ss_pred             HhHCEEEEEEEc
Confidence             69999999743

>d1mjuh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=93.03  E-value=0.05  Score=42.39  Aligned_cols=61  Identities=23%  Similarity=0.434  Sum_probs=41.4

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----c-CCC----------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----L-TPD----------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~-~~~----------~~~~~~------~~~l~i~~l--~  166 (904)
                      ..+.+|+++.|.|+++|...  -.+.|.+  .+ +.+    + ...          .|+.+.      ...|.|.+|  +
T Consensus        10 ~~~kPg~sl~LsC~~SG~s~~~~~~~WvRQ~PGkgLEw~g~i~~~~~~~~ya~s~kgR~tiS~D~s~~tvyL~~~sL~~e   89 (116)
T d1mjuh1          10 ELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSD   89 (116)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             cEECCCCCEEEEEEEccCccccCceEeeeeCCCcceeeeeecCccccccccccccceeeeEecccccceeEecccccCCC
Confidence            67889999999999999765  3578987  21 111    1 111          244331      236888999  6


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        90 DtAvYYCAr   98 (116)
T d1mjuh1          90 DSAVYYCAN   98 (116)
T ss_dssp             GCEEEEEEE
T ss_pred             CceEEEEcc
Confidence            999999954

>d1l6xa2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.01  E-value=0.1  Score=40.48  Aligned_cols=59  Identities=14%  Similarity=0.260  Sum_probs=37.5

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCC---CceeecceEEEEeee--------cCCeEEEEEEEec
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPD---DKLPVGRNVLTLDRV--------TESENYTCIAASV  178 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~---~~~~~~~~~l~i~~l--------~d~g~Y~c~a~n~  178 (904)
                      .++.++|.|.+.| .|. ..|+|.++ |......   .-....++++.+...        ..+..|+|.+...
T Consensus        18 ~~~~~tL~Clv~gf~P~~i~v~W~~~-g~~~~~~~~~~~~~~~dgtys~~S~L~v~~~~w~~g~~ytC~V~H~   89 (102)
T d1l6xa2          18 TKNQVSLTCLVKGFYPSDIAVEWESN-GQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHE   89 (102)
T ss_dssp             GSSEEEEEEEEEEEBSSCCEEEEEET-TEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECT
T ss_pred             cCCceEEEEEEEEeECCCCEEEEEEC-CEECCCeEEcceEECCCCCEEEEEEEEECHHHcCCCCEEEEEEEeC
Confidence            4678999999999 565 48999999 5544321   112224444443322        3567899999864

>d1ct8b1 b.1.1.1 (B:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.3 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.3 [TaxId: 10090]

Probab=92.98  E-value=0.077  Score=41.62  Aligned_cols=62  Identities=23%  Similarity=0.473  Sum_probs=41.3

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--C-Cccc----c-CC----------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--G-QNIE----L-TP----------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~-~~~~----~-~~----------~~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|...  -.+.|.+  . ++.+    + ..          ..|+.+      +...|.|.+|  +
T Consensus        10 ~~~kPg~sl~LsC~~SG~~~~~~~~~WvRQ~PGkgLEwlg~i~~~~~~~~y~~~~~gR~tis~D~s~~t~yL~i~~L~~e   89 (118)
T d1ct8b1          10 VLVKPGASVKLSCKTSGFTFSSSYINWLKQKPGQSLEWIAWIYAGSGGTVYNQHFTDKARLTVDTSSSTAYMQFSSLTTE   89 (118)
T ss_dssp             EEECTTCCEEEEEEEESSCSTTCEEEEEEECTTSCEEEEEEEETTTCCEEECTTSTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEccccCCCCCCcccEECCCCceEeeeeccccccchhhhhheeeeEEEEecCccceEEecccccCCC
Confidence            67789999999999999654  4678887  2 1111    1 11          123332      1236889999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DtAvYYCAr~   99 (118)
T d1ct8b1          90 DSAIYYCARY   99 (118)
T ss_dssp             GCEEEEEEEE
T ss_pred             cceEEEEeee
Confidence            9999999653

>d1igtb4 b.1.1.2 (B:363-474) Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma {Mouse (Mus musculus), gamma2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma
species: Mouse (Mus musculus), gamma2 [TaxId: 10090]

Probab=92.97  E-value=0.088  Score=40.90  Aligned_cols=59  Identities=14%  Similarity=0.304  Sum_probs=36.5

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCC---CceeecceEEEEee------e--cCCeEEEEEEEec
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPD---DKLPVGRNVLTLDR------V--TESENYTCIAASV  178 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~---~~~~~~~~~l~i~~------l--~d~g~Y~c~a~n~  178 (904)
                      .++.++|.|.+.| .|. ..|+|.++ |......   ......++.+.+..      -  ..+..|+|.+...
T Consensus        18 ~~~~~tl~C~v~gf~P~~i~v~W~~~-g~~~~~~~~~~~~~~~dgtys~~S~L~v~~~~W~~~~~ytC~V~H~   89 (102)
T d1igtb4          18 TKKQVTLTCMVTDFMPEDIYVEWTNN-GKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHE   89 (102)
T ss_dssp             TSSEEEEEEEEEEEBSSCCEEEEEET-TEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECT
T ss_pred             cCCcEEEEEEEEEeECCCcEEEEEEC-CEEccCcEEccceeCCCCcEEEEEEEEECHHHcCCCCEEEEEEEeC
Confidence            4678999999999 565 58999999 5433221   11112344333322      2  2577899999753

>d1jbja2 b.1.1.4 (A:1-100) CD3 epsilon chain ectodomain fragment {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: CD3 epsilon chain ectodomain fragment
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.96  E-value=0.045  Score=40.03  Aligned_cols=55  Identities=22%  Similarity=0.408  Sum_probs=39.4

Q ss_pred             eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee---cCCeEEEEEEEe
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV---TESENYTCIAAS  177 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l---~d~g~Y~c~a~n  177 (904)
                      -+-..|..|+|.|...+.  -.|.|.++ +..++..     ++..|.+.+.   +++|.|.|...+
T Consensus         9 kVSISGTtV~LTCP~~~~--~~I~Wkkn-~~~i~g~-----~~~~L~L~~FSE~e~SGyY~C~~~~   66 (100)
T d1jbja2           9 KVSISGTSVELTCPLDSD--ENLKWEKN-GQELPQK-----HDKHLVLQDFSEVEDSGYYVCYTPA   66 (100)
T ss_dssp             EEEEETTEEEEECSSCCC--TTCEEEET-TEEECSC-----CCSEEEEESCCTTTSCEEEEEECSS
T ss_pred             EEEEeCCEEEEECCCCCC--CceEEeec-cccCCCC-----CCcEEEEccccccccCcceEEecCC
Confidence            344579999999997754  35999999 5554431     3446888876   699999997543

>d1um5h1 b.1.1.1 (H:3-119) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=92.94  E-value=0.12  Score=40.53  Aligned_cols=62  Identities=21%  Similarity=0.375  Sum_probs=42.0

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cc--c----cC-CC----------Cceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NI--E----LT-PD----------DKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~--~----~~-~~----------~~~~~------~~~~l~i~~l--~  166 (904)
                      ..+.+|++++|.|.++|...  -.+.|.+-. |.  +    +. .+          .|+.+      +...|.|.+|  +
T Consensus         9 ~~~kPG~sl~LsC~~SG~~~~~y~~~WvRQ~pGkglewl~~i~~~~~~~~y~~~~kgRftiS~D~s~~t~~L~m~sL~~e   88 (117)
T d1um5h1           9 VLVKPGGSVKMSCKASEYTLTSYLFQWVKQKSGQGLEWIGYIYPYNGGTRYNEKFRGKATLTSDKSSNTAYLELSSLTSE   88 (117)
T ss_dssp             EEECTTCCEEEEEEESSCCCSCCEEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTCEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEccccCCCCcCccceeCCCccceeeeecCCccCccccccceeeeEEEEeccCceeEeecccccCCC
Confidence            67789999999999999765  468898721 11  1    11 11          34433      1235899999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |...|.|...
T Consensus        89 DtAvYYCAr~   98 (117)
T d1um5h1          89 DSAVYYCARS   98 (117)
T ss_dssp             GCEEEEEEEE
T ss_pred             cceEEEEeec
Confidence            9999999643

>d1ai1h1 b.1.1.1 (H:1-112) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 7.3 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 7.3 [TaxId: 10090]

Probab=92.92  E-value=0.097  Score=41.32  Aligned_cols=62  Identities=16%  Similarity=0.330  Sum_probs=41.0

Q ss_pred             eEEecCCCeEEEEEEccCCC----CeEEEeeCC-cccc------CC-C---------Cceeec------ceEEEEeee--
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM----PFVKWRKGQ-NIEL------TP-D---------DKLPVG------RNVLTLDRV--  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~----p~i~W~k~~-~~~~------~~-~---------~~~~~~------~~~l~i~~l--  165 (904)
                      -.+.+|++++|.|+++|...    ..+.|.+-. |..+      .. +         .|+.+.      ...|.|.+|  
T Consensus        10 ~~vkPg~sl~LsC~~SG~s~~~s~y~~~W~RQ~PGkglEwl~~i~~~g~t~y~~s~kgRfTiSrD~s~n~~~L~~~sL~~   89 (120)
T d1ai1h1          10 AVIKPSQSLSLTCIVSGFSITRTNYCWHWIRQAPGKGLEWMGRICYEGSIYYSPSIKSRSTISRDTSLNKFFIQLISVTN   89 (120)
T ss_dssp             SEECSSSCEEEEEEEESSCTTSTTEEEEEEEECTTSCEEEEEEEETTSCEEECHHHHTTEEEEEETTTTEEEEEESSCCG
T ss_pred             ceECCCCCEEEEEEEcccccccCccccCcccCCCcccceeeeecccccchhhchhhcccceeccccccceeecceeeeec
Confidence            56789999999999998643    257898721 2111      11 1         244331      235899999  


Q ss_pred             cCCeEEEEEEE
Q psy8771         166 TESENYTCIAA  176 (904)
Q Consensus       166 ~d~g~Y~c~a~  176 (904)
                      +|.+.|.|...
T Consensus        90 eDtAvYYCAr~  100 (120)
T d1ai1h1          90 EDTAMYYCSRE  100 (120)
T ss_dssp             GGCEEEEEEEE
T ss_pred             cceeEEEEEec
Confidence            69999999644

>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId: 9103]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Telokin
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

Probab=92.91  E-value=0.046  Score=42.72  Aligned_cols=31  Identities=19%  Similarity=0.201  Sum_probs=26.8

Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      .....+.|.++...+.+.|+|.|.|..|...
T Consensus        62 ~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~   92 (102)
T d1fhga_          62 EGNCSLTISEVCGDDDAKYTCKAVNSLGEAT   92 (102)
T ss_dssp             TCEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred             CceeeeEecCCCHHhCEEEEEEEEECCcEEE
Confidence            3356799999999999999999999998653

>d1a21a1 b.1.2.1 (A:4-106) Extracellular region of human tissue factor {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=92.90  E-value=0.39  Score=36.73  Aligned_cols=74  Identities=11%  Similarity=0.286  Sum_probs=51.4

Q ss_pred             CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcC--CCC-CCeEEEEEEE
Q psy8771         483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISD--LTP-HTIYTIRVQA  558 (904)
Q Consensus       483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--L~p-~t~Y~~~V~a  558 (904)
                      +.|.|+++.+.+ -...|.|+++..    ...|.|+|+..+    ..|...-. ...+.+.|++  |.+ ...|.+||+|
T Consensus         2 ~k~~NV~~~S~N-f~~iL~W~p~~~----~~~YtVqy~~~~----~~W~~~C~nit~~~CDlt~~~~~~~~~~Y~aRVra   72 (103)
T d1a21a1           2 GRAYNLTWKSTN-FKTILEWEPKSI----DHVYTVQISTRL----ENWKSKCFLTAETECDLTDEVVKDVGQTYMARVLS   72 (103)
T ss_dssp             CCCEEEEEEEET-TEEEEEEECCCS----SEEEEEEEECSS----SCCEEEEEEESSSEEECHHHHTTCTTSCBEEEEEE
T ss_pred             CCCEEEEEEEEc-CceEEEECCCCC----CeEEEEEEEecC----CCccccccCcCcceecCcccccccCCCCEEEEEEE
Confidence            467899988877 577899998532    256999998764    34654322 4566788874  444 4679999999


Q ss_pred             EeCCCCC
Q psy8771         559 FTSVGPG  565 (904)
Q Consensus       559 ~~~~g~~  565 (904)
                      ....+.+
T Consensus        73 ~~~~~~s   79 (103)
T d1a21a1          73 YPARNGN   79 (103)
T ss_dssp             EECCC--
T ss_pred             ecCCCcc
Confidence            9876654

>d1oari_ b.1.1.1 (I:) Immunoglobulin heavy chain variable domain, VH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.87  E-value=0.087  Score=40.42  Aligned_cols=61  Identities=20%  Similarity=0.373  Sum_probs=38.8

Q ss_pred             cCCCeEEEEEEccCCC--CeEEEeeCC-ccc------cC-C----------CCceeec------ceEEEEeee--cCCeE
Q psy8771         119 LDSPLNLSCVAVGSPM--PFVKWRKGQ-NIE------LT-P----------DDKLPVG------RNVLTLDRV--TESEN  170 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p~--p~i~W~k~~-~~~------~~-~----------~~~~~~~------~~~l~i~~l--~d~g~  170 (904)
                      +|++++|.|+++|...  -.+.|.+-. |..      +. .          ..|+.+.      ...|+|.+|  +|.+.
T Consensus         1 PG~sl~LsC~~SG~s~~~y~~~WvRQ~PGkglEwl~~i~~~~~~~~y~~~~~~R~tiS~D~s~~t~~L~~~sL~~eDTAv   80 (103)
T d1oari_           1 PGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAV   80 (103)
T ss_dssp             CCCCEEEEEECCSSCSTTSEEEEEEEC----CEEEEEEC----CEEECTTTTTTEEEEC----CEEEEEECCC---CCSE
T ss_pred             CCCCeEEEEEEECCChhcCceeeEEeCCCCceEeeeeccccccccccccceeeceEEeccccccEEEeeeeeccccccEE
Confidence            5899999999999754  368899721 111      11 1          1344331      236999999  69999


Q ss_pred             EEEEEEecC
Q psy8771         171 YTCIAASVL  179 (904)
Q Consensus       171 Y~c~a~n~~  179 (904)
                      |.|......
T Consensus        81 YYCAr~~~~   89 (103)
T d1oari_          81 YYCARMWYY   89 (103)
T ss_dssp             EEEEEEECS
T ss_pred             EEeEEECCC
Confidence            999765443

>d2p49b1 b.1.1.1 (B:1-121) Camelid IG heavy chain variable domain, VHh {Camel (Camelus dromedarius) [TaxId: 9838]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Camelid IG heavy chain variable domain, VHh
species: Camel (Camelus dromedarius) [TaxId: 9838]

Probab=92.86  E-value=0.092  Score=41.34  Aligned_cols=61  Identities=23%  Similarity=0.468  Sum_probs=41.1

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cc--c----c-CC----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NI--E----L-TP----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~--~----~-~~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|.++|...  ..+.|.+-. |.  +    + ..          ..|+.+.      ...|.|.+|  +
T Consensus        10 ~lvkPg~sl~LsC~~SG~s~s~y~~~WvRQ~PGkglewv~~i~~~~~~~~Y~~s~kgRftiSrD~s~~t~yLq~~~L~~e   89 (121)
T d2p49b1          10 GLVQAGGSLRLSCAASGYAYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRFTISRDKGKNTVYLQMDSLKPE   89 (121)
T ss_dssp             EEEETTCCEEEEEEEESCSSCCSEEEEEEECTTSCCEEEEEEETTSCSCEECGGGTTTEEEECTTSTTEEEEEECSCCGG
T ss_pred             ceECCCCCeEEEEEEcCCCcccCceeeccCCCCCceeeeeecCCcccccccccceeEeEEEeecCCceEEEEEeeecccc
Confidence            56789999999999998654  467898721 11  1    1 11          1244431      235889999  6


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        90 DtAvYYCAr   98 (121)
T d2p49b1          90 DTATYYCAA   98 (121)
T ss_dssp             GCEEEEEEE
T ss_pred             ceeEEeeec
Confidence            999999965

>d1a2yb_ b.1.1.1 (B:) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 5 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 5 [TaxId: 10090]

Probab=92.85  E-value=0.19  Score=39.24  Aligned_cols=62  Identities=18%  Similarity=0.374  Sum_probs=41.7

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cccc------CC----------CCceeec------ceEEEEeee--cC
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NIEL------TP----------DDKLPVG------RNVLTLDRV--TE  167 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~~~------~~----------~~~~~~~------~~~l~i~~l--~d  167 (904)
                      -.+.+|+.++|.|+++|...  -.+.|.+.- |..+      ..          ..|+.+.      ...|.|++|  +|
T Consensus        10 ~~vkPg~sl~LsC~~SG~s~~~y~~~WvRQ~PGkglewlg~i~~~~~~~y~~s~kgR~tis~D~s~n~~~L~~~~l~~eD   89 (116)
T d1a2yb_          10 GLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDD   89 (116)
T ss_dssp             SEECTTSCEEEEEEEESSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEEGGGTEEEEEECSCCGGG
T ss_pred             ceECCCCCeEEEEEEcccccCCCCCccceECCCcceeeeeecCccccceecccccccceEeccCCCceEEcceeeeeecc
Confidence            56789999999999999765  357898721 1111      11          1233331      235999999  69


Q ss_pred             CeEEEEEEE
Q psy8771         168 SENYTCIAA  176 (904)
Q Consensus       168 ~g~Y~c~a~  176 (904)
                      .+.|.|.-.
T Consensus        90 TAvYYCAr~   98 (116)
T d1a2yb_          90 TARYYCARE   98 (116)
T ss_dssp             CEEEEEEEE
T ss_pred             ceEEEEEEe
Confidence            999999754

>d1u58a1 b.1.1.2 (A:145-242) Immunomodulatory protein m144, alpha-3 domain {Murine cytomegalovirus [TaxId: 10366]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunomodulatory protein m144, alpha-3 domain
species: Murine cytomegalovirus [TaxId: 10366]

Probab=92.84  E-value=0.1  Score=39.94  Aligned_cols=57  Identities=21%  Similarity=0.370  Sum_probs=36.5

Q ss_pred             CCCeEEEEEEccC-CC-CeEEEeeCCccccCC----C----CceeecceEEEEeee-----cCCeEEEEEEEe
Q psy8771         120 DSPLNLSCVAVGS-PM-PFVKWRKGQNIELTP----D----DKLPVGRNVLTLDRV-----TESENYTCIAAS  177 (904)
Q Consensus       120 g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~----~----~~~~~~~~~l~i~~l-----~d~g~Y~c~a~n  177 (904)
                      ...++|.|.+.|. |. ..|+|.+| +..+..    +    .....+++++.+...     .+...|+|.+.-
T Consensus        14 ~~~vtL~C~~~gFyP~~I~v~W~~n-g~~~~~~~~~~~~~~~~~~~~dgty~~~s~l~v~~~~~~~ytC~V~H   85 (98)
T d1u58a1          14 EGGMRLRCFARDYYPADLEIRWWKD-DGGGGALPQTSKQHHDPLPSGNGLYQKHIDVYVDGGLEHVYSCRVKG   85 (98)
T ss_dssp             SSCEEEEEEEEEEBSSCEEEEEEEE-CSSSCEEECCCSCCCCCEECSSSCEEEEEEEEECTTCGGGEEEEEEE
T ss_pred             CCcEEEEEEEEEEcCCCCEEEEEEC-CccccCcEeeeeEEcceeeCCCCEEEEEEEEEECCCCCCEEEEEEEe
Confidence            4578999999995 44 46899998 443321    1    112335666655443     356789999864

>d1pg7x1 b.1.1.1 (X:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=92.82  E-value=0.1  Score=41.18  Aligned_cols=62  Identities=26%  Similarity=0.454  Sum_probs=41.8

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--C-Ccccc----C-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--G-QNIEL----T-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~-~~~~~----~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+.++|.|.++|...  ..+.|++  . ++.++    . .          ..|+.+.      .-.|.|.+|  +
T Consensus        10 ~~vkpG~sl~LsC~~SG~s~~~~~~~W~RQ~PGk~lewl~~i~~~~~~~~y~~~~kgR~tis~d~s~n~v~L~i~~l~~e   89 (120)
T d1pg7x1          10 ELVKPGASVKISCKASGYSFTGHLLNWVKQSHGKNLEWIGLVHPHNGAITYNQKFKDKATLTVDRSSTTAYIELVRLTSN   89 (120)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             cEECCCCCEEEEEEEccccCCCCCcceeeecCCCceEEeeecCccccchhhhHHhhhcceeeeccCcceEEccccccCCC
Confidence            56789999999999998754  4688987  2 11111    1 1          1244331      225899999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DtA~YYCAr~   99 (120)
T d1pg7x1          90 DSAVYYCARE   99 (120)
T ss_dssp             GCEEEEEEEE
T ss_pred             cceEEEeeec
Confidence            9999999764

>d1kcvh2 b.1.1.2 (H:117-217) Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.79  E-value=0.088  Score=40.78  Aligned_cols=61  Identities=23%  Similarity=0.370  Sum_probs=36.4

Q ss_pred             cCCCeEEEEEEcc-CCC-CeEEEeeCCccccCC--CCceeecceE------EEEeeec-CCeEEEEEEEecCcc
Q psy8771         119 LDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTP--DDKLPVGRNV------LTLDRVT-ESENYTCIAASVLGV  181 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~--~~~~~~~~~~------l~i~~l~-d~g~Y~c~a~n~~g~  181 (904)
                      .++.++|.|.+.| .|. ..|.|.++ +.....  .... ..++.      |.|..-+ .++.|+|.+......
T Consensus        19 ~~~~~tl~Cl~~gf~P~~i~v~W~~~-~~~~~~~~~~~~-~~~g~~s~~S~L~v~~~~w~~~~ytC~V~H~~~~   90 (101)
T d1kcvh2          19 AASAVTLGCLVKGYFPEPVTVAWNEG-ALSSGVLTVSAV-LQSGLYTLSSNTTVASGTWPSASVTCLVAHPKSS   90 (101)
T ss_dssp             TCSEEEEEEEEEEEBSSCCEEEEGGG-TCCTTEEECCCE-EETTEEEEEEEEEEETTTTTTSCCEEEEEEGGGT
T ss_pred             CCCeEEEEEEEEEEeCCCCEEEEecC-CCcccceeeeee-cCCCCEEEEEEEEEchhhcCCCeEEEEEEeCCCC
Confidence            5789999999999 565 57999887 432210  0111 12333      3332222 467899999875443

>d1i1ca2 b.1.1.2 (A:342-443) Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.77  E-value=0.066  Score=41.68  Aligned_cols=58  Identities=16%  Similarity=0.310  Sum_probs=36.1

Q ss_pred             CCCeEEEEEEccC-CC-CeEEEeeCCccccCCCC---ceeecceEEEEee---e-----cCCeEEEEEEEec
Q psy8771         120 DSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDD---KLPVGRNVLTLDR---V-----TESENYTCIAASV  178 (904)
Q Consensus       120 g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~---~~~~~~~~l~i~~---l-----~d~g~Y~c~a~n~  178 (904)
                      .+.++|.|.+.|. |. ..|+|.++ |.......   -....++.+.+..   +     ..+..|+|.+...
T Consensus        19 ~~~~~L~C~v~~f~P~~i~v~W~~~-g~~~~~~~~~~~~~~~dgt~s~~S~L~v~~~~w~~~~~ytC~V~H~   89 (102)
T d1i1ca2          19 QSQVSITCMVKGFYPPDIYTEWKMN-GQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHE   89 (102)
T ss_dssp             SSEEEEEEEEEEEBSSCCEEEEEET-TEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECT
T ss_pred             CCeEEEEEEEEEEECCCCEEEEEEC-CeeccCcEEcccEeCCCCCEEEEEEEEECHHHhCCCCEEEEEEEeC
Confidence            5678999999985 44 57999999 55443211   1122344433332   1     3577899999763

>d1rz7h1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=92.76  E-value=0.072  Score=41.90  Aligned_cols=62  Identities=16%  Similarity=0.389  Sum_probs=41.8

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEeeCC-ccc------cC-C----------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRKGQ-NIE------LT-P----------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~-~~~------~~-~----------~~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|....  .+.|.+-. |..      +. .          ..|+.+      +...|.|.+|  +
T Consensus        10 ~~~kpg~sl~LsC~~SG~~~~~~~~~WvRQ~PGkglewv~~i~~~~~~~~ya~s~kgRftiSrD~s~nt~yLqm~sL~~e   89 (119)
T d1rz7h1          10 EVKKPGATVKISCKASGYTFSDFYMYWVRQAPGKGLEWMGLIDPEDADTMYAEKFRGRVTITADTSTDTGYLELSSLRSE   89 (119)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCcCCceEccccCCccceeeeeecCCcccccccccceeeeEEEecccCceEEEeeeeccCcc
Confidence            567899999999999997653  58898721 111      11 1          124443      1236899999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DTAvYYCAr~   99 (119)
T d1rz7h1          90 DTAVYYCAAD   99 (119)
T ss_dssp             GCEEEEEEEC
T ss_pred             cceEEEEeec
Confidence            9999999654

>d1j05b_ b.1.1.1 (B:) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=92.70  E-value=0.12  Score=40.90  Aligned_cols=62  Identities=23%  Similarity=0.426  Sum_probs=41.8

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cccc-------CCC----------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NIEL-------TPD----------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~~~-------~~~----------~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+.++|.|+++|...  ..+.|++-. |..+       ..+          .|+.+.      ...|.|++|  +
T Consensus        10 ~~~kpG~sv~LsC~~SG~~~s~~~~~W~RQ~PGkgle~l~~i~~~~~~~~y~~~~kgR~tis~D~s~~t~~L~i~~L~~e   89 (121)
T d1j05b_          10 ELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSE   89 (121)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEecCCCCCCCcceeeECCCCccccccccCCcCCccccchhhccceEEEeecCCceeeecccccCcC
Confidence            66889999999999998654  468898721 2111       111          244331      235899999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DtAvYYCAr~   99 (121)
T d1j05b_          90 DTAVYYCAPF   99 (121)
T ss_dssp             GCEEEEEEEE
T ss_pred             cceEEEeEee
Confidence            9999999654

>d1indh1 b.1.1.1 (H:1-114) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]

Probab=92.63  E-value=0.071  Score=41.48  Aligned_cols=61  Identities=21%  Similarity=0.432  Sum_probs=41.1

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-c--cc----cC-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-N--IE----LT-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~--~~----~~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|.++|...  ..+.|.+-. |  .+    +. .          ..|+.+.      .-.|.|++|  +
T Consensus        10 ~~vkpG~sl~LsC~~SG~~~s~~~~~WvRQ~PGkglEwv~~i~~~~~~~~y~~s~kgRftiSrD~s~nt~~L~~~~L~~e   89 (114)
T d1indh1          10 DSVKPGGSLKLSCAASGFTLSGETMSWVRQTPEKRLEWVATTLSGGGFTFYSASVKGRFTISRDNAQNNLYLQLNSLRSE   89 (114)
T ss_dssp             CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECSTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEECccCccCCceeccccCCCCccEEeeecccccchhhhhhhheeeEEEeccCccceeeeeeeeeccC
Confidence            56789999999999999764  457888721 1  11    11 1          1244431      125899999  6


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        90 DtAvYYCA~   98 (114)
T d1indh1          90 DTALYFCAS   98 (114)
T ss_dssp             GCEEEEEEC
T ss_pred             cccEEEECC
Confidence            999999964

>d2jelh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=92.62  E-value=0.074  Score=41.66  Aligned_cols=60  Identities=22%  Similarity=0.399  Sum_probs=41.0

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--CC-ccc----cC-C-C---------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--GQ-NIE----LT-P-D---------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~~-~~~----~~-~-~---------~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|...-  .+.|.+  .+ +.+    +. . +         .|+.+.      ...|.|++|  +
T Consensus        10 ~~~kpg~sl~lsC~~SG~~~~~y~~~WvRQ~PGkglewlg~i~~~~~~~~y~~~~kgR~tiS~D~s~~t~~L~~~sL~~e   89 (118)
T d2jelh1          10 ELVRPGVSVKISCKGSGYTFTTYAMHWVKQSHAKSLEWIGLISTYSGYTNYNQKFKGKATMTVDKSSSTAYMELARLTSE   89 (118)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEECSSSSEEEEEEECTTTCCEEECGGGBTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCCCCceecceeCCCcccccccccCCcCCcchhhhhhcccEEEecccCcceEeecccccccC
Confidence            667899999999999997653  688997  21 111    11 1 1         233331      236899999  6


Q ss_pred             CCeEEEEE
Q psy8771         167 ESENYTCI  174 (904)
Q Consensus       167 d~g~Y~c~  174 (904)
                      |.+.|.|.
T Consensus        90 DTAvYYCA   97 (118)
T d2jelh1          90 DSAIYYCA   97 (118)
T ss_dssp             GCEEEEEE
T ss_pred             cceeeeEE
Confidence            99999994

>d1zvya1 b.1.1.1 (A:2-125) Camelid IG heavy chain variable domain, VHh {Camel (Camelus dromedarius) [TaxId: 9838]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Camelid IG heavy chain variable domain, VHh
species: Camel (Camelus dromedarius) [TaxId: 9838]

Probab=92.58  E-value=0.098  Score=41.51  Aligned_cols=62  Identities=31%  Similarity=0.510  Sum_probs=41.7

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-cc--c----c-CCC----------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NI--E----L-TPD----------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~--~----~-~~~----------~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|.++|...  -.+.|.+-. |.  +    + ..+          .|+.+.      .-.|.|.+|  +
T Consensus         9 ~lvkpg~sl~LsC~~SG~~~~~~~~~WvRQ~PGkglewv~~i~~~~~~~~y~~s~kgR~tis~D~s~~t~yLq~~sL~~e   88 (124)
T d1zvya1           9 GSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVKSE   88 (124)
T ss_dssp             EECCTTCCEEEEEEEESCSTTCCEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ceECCCCCeEEEEEEcCcccccccccccccCCccceEEEeecccccccceeccccccccEEecccccceeeceeccccCC
Confidence            45678999999999999765  368899721 11  1    1 111          234331      235888999  7


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        89 DtAvYYCAr~   98 (124)
T d1zvya1          89 DTAIYTCGAT   98 (124)
T ss_dssp             GCEEEEEEEC
T ss_pred             cceEEEEeec
Confidence            9999999764

>d1i3ua_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh {Llama (Lama glama) [TaxId: 9844]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Camelid IG heavy chain variable domain, VHh
species: Llama (Lama glama) [TaxId: 9844]

Probab=92.56  E-value=0.2  Score=39.97  Aligned_cols=63  Identities=21%  Similarity=0.385  Sum_probs=42.0

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeC---CccccC----------C----------CCceee------cceEEEEe
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKG---QNIELT----------P----------DDKLPV------GRNVLTLD  163 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~---~~~~~~----------~----------~~~~~~------~~~~l~i~  163 (904)
                      -.+.+|++++|.|.++|...  -.+.|++-   ++.+..          .          ..|+.+      +...|+|+
T Consensus        10 ~lvkpg~sl~LsC~~SG~~~s~y~~~W~RQ~PGkglewl~~I~~~~~~~~~~~~~y~~~~kgR~tis~d~s~~~~~L~i~   89 (127)
T d1i3ua_          10 GLVQAGDSLKLSCEASGDSIGTYVIGWFRQAPGKERIYLATIGRNLVGPSDFYTRYADSVKGRFAVSRDNAKNTVNLQMN   89 (127)
T ss_dssp             EECCTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEEEEESSSSCEEEEECTTTBTTEEEEEEGGGTEEEEEEC
T ss_pred             ceECCCCCeEEEEEEcCCCCCCCceEeeeeCCccceeEEEEEccccccCCCCcceechhhccceeEeccCCceEEEEeee
Confidence            45678999999999999754  46889972   111110          0          124433      12368999


Q ss_pred             ee--cCCeEEEEEEEe
Q psy8771         164 RV--TESENYTCIAAS  177 (904)
Q Consensus       164 ~l--~d~g~Y~c~a~n  177 (904)
                      +|  +|.+.|.|....
T Consensus        90 ~l~~eDtAvYYCAr~~  105 (127)
T d1i3ua_          90 SLKPEDTAVYYCAAKT  105 (127)
T ss_dssp             SCCGGGCEEEEEEEES
T ss_pred             cccccceeEEEEEEEe
Confidence            99  799999997653

>d1etzb1 b.1.1.1 (B:1-126) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 6 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 6 [TaxId: 10090]

Probab=92.52  E-value=0.28  Score=39.13  Aligned_cols=62  Identities=21%  Similarity=0.385  Sum_probs=40.4

Q ss_pred             eEEecCCCeEEEEEEccCCC----CeEEEee--CC-cccc-----CC---------CCceeec------ceEEEEeee--
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM----PFVKWRK--GQ-NIEL-----TP---------DDKLPVG------RNVLTLDRV--  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~----p~i~W~k--~~-~~~~-----~~---------~~~~~~~------~~~l~i~~l--  165 (904)
                      -.+.+|+.++|.|.++|...    ..+.|++  .+ +.++     ..         ..|+.+.      ...|.|.+|  
T Consensus        10 ~lvkPg~sv~LsC~~SG~s~s~~~~~~~W~RQ~pg~~le~l~~i~~~~~~~~~~s~~~Rftis~d~s~~t~~L~i~~l~~   89 (126)
T d1etzb1          10 GILQPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGEGLEWLADIWWNDKKYYNPSLKSRLTVSKDTSSNQVFLKITSVDT   89 (126)
T ss_dssp             SEECTTCCEEEEEEEESSCTTSTTEEEEEEEEETTTCCEEEEEEETTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred             ceECCCCCEEEEEEEeCCccCCCCCCCeEEeCCCCccceEeeecCCCCCceeceeeeEeeEEecccCCcEEEcceecccc
Confidence            45678999999999998532    3567986  21 1111     11         1244431      236999999  


Q ss_pred             cCCeEEEEEEE
Q psy8771         166 TESENYTCIAA  176 (904)
Q Consensus       166 ~d~g~Y~c~a~  176 (904)
                      +|...|.|...
T Consensus        90 eDtAvYyCAr~  100 (126)
T d1etzb1          90 SDTATYHCARR  100 (126)
T ss_dssp             GGCEEEEEEEE
T ss_pred             cccceEEEEEe
Confidence            69999999753

>d1ncwh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]

Probab=92.46  E-value=0.082  Score=41.54  Aligned_cols=62  Identities=19%  Similarity=0.417  Sum_probs=41.2

Q ss_pred             eEEecCCCeEEEEEEccCCCC---eEEEee--CC-cccc-----CC---------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP---FVKWRK--GQ-NIEL-----TP---------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p---~i~W~k--~~-~~~~-----~~---------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|....   .+.|.+  .+ +.+.     ..         ..|+.+.      ...|.|.+|  +
T Consensus        10 ~~vkPg~sl~LsC~~SG~s~~s~y~~~WvRQ~PGkglEwig~i~~~~~t~y~~s~kgR~TiS~D~s~nt~~L~~~sL~~e   89 (119)
T d1ncwh1          10 GLVKPSQSLSLTCTVTGYSITSDFAWNWIRQFPGNKLEWMGYINYSGFTSHNPSLKSRISITRDTSKNQFFLQLNSVTTE   89 (119)
T ss_dssp             SEECTTSCEEEEEEEESSCTTSSEEEEEEEEETTTEEEEEEEEETTSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             cEECCCCCEEEEEEEccccccCCCccccceECCCcceeeeeeccccccchhchhccccceEecccccceeeccccccccC
Confidence            567799999999999998653   478987  31 1111     11         1234331      236899999  7


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |...|.|...
T Consensus        90 DTAvYYCAr~   99 (119)
T d1ncwh1          90 DTATYYCAGL   99 (119)
T ss_dssp             GCEEEEEEEE
T ss_pred             CceEEEEeEe
Confidence            9999999643

>d1mfah1 b.1.1.1 (H:251-367) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=92.45  E-value=0.095  Score=41.06  Aligned_cols=61  Identities=20%  Similarity=0.391  Sum_probs=40.8

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----cC-C----------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----LT-P----------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~~-~----------~~~~~~------~~~~l~i~~l--~  166 (904)
                      ..+.+|++++|.|+++|...  ..+.|.+  .+ +.+    +. .          ..|+.+      +...|.|.+|  +
T Consensus        10 ~~~kPG~sl~LsC~~SG~s~s~~~~~WvRQ~PGkglEwl~~i~~~~~~~~ya~~~~~R~t~s~D~s~~~~~L~i~~L~~e   89 (117)
T d1mfah1          10 VVARPGASVKMSCKASGYTFTNYWMHWIKQRPGQGLEWIGAIYPGNSATFYNHKFRAKTKLTAVTSTTTAYMELSSLTSE   89 (117)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcccCCCCCceEeeeeCCCCcceeeEccCcccccccccccceeeEEEEcccCccEeEeeecccCCC
Confidence            67789999999999998654  4578887  21 111    11 1          123333      1236899999  6


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        90 DtAvYYCAr   98 (117)
T d1mfah1          90 DSAVYYCTR   98 (117)
T ss_dssp             GCEEEEEEE
T ss_pred             cceEEEEec
Confidence            999999954

>d1eapb1 b.1.1.1 (B:1-124) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=92.44  E-value=0.066  Score=42.08  Aligned_cols=61  Identities=25%  Similarity=0.432  Sum_probs=41.1

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--C-Cccc----cCC-C----------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--G-QNIE----LTP-D----------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~-~~~~----~~~-~----------~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|+++|...  -.+.|.+  . ++.+    +.. +          .|+.+.      ...|.|.+|  +
T Consensus        10 ~~~kPg~sl~LsC~~SG~~~~~y~~~WvRQ~PGkglewl~~i~~~~~~~~y~~s~kgRftiSrD~s~nt~~L~~~sL~~e   89 (119)
T d1eapb1          10 ELVKPGASVKISCKASGYISTDHAIHWVKQRPEQGLEWIGYISPGNGDIKYNEKFKVKATLTADQSSSTAYMQLNSLTSE   89 (119)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECSSSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEccCcccCCCCccceeCCcccceeeeecCCcccchhhhhhhhcceEEEcccCcceEEeeeecccCC
Confidence            56789999999999999764  3588987  2 1211    111 1          243331      236899999  6


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        90 DTAvYYCAr   98 (119)
T d1eapb1          90 DSAVYFCKR   98 (119)
T ss_dssp             GCEEEEEEE
T ss_pred             cceEEEEEE
Confidence            999999953

>d1hxma2 b.1.1.2 (A:121-206) T-cell antigen receptor {Human (Homo sapiens), gamma-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), gamma-chain [TaxId: 9606]

Probab=92.38  E-value=0.14  Score=38.06  Aligned_cols=58  Identities=12%  Similarity=0.108  Sum_probs=36.9

Q ss_pred             CCCeEEEEEEccC-CC-CeEEEeeCCccccCCCCce-eecceEEEEe---eecCCeEEEEEEEec
Q psy8771         120 DSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDKL-PVGRNVLTLD---RVTESENYTCIAASV  178 (904)
Q Consensus       120 g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~~-~~~~~~l~i~---~l~d~g~Y~c~a~n~  178 (904)
                      .+.++|.|.+.|. |. ..|+|.++ |......... ...++.+...   .+..+..|+|.+...
T Consensus        13 ~~~~tl~Cl~~gF~P~~i~v~W~~~-g~~~~~~~~~~~~~~gtys~~s~~~~~~~~~yTC~V~H~   76 (86)
T d1hxma2          13 KNGTNVACLVKEFYPKDIRINLVSS-KKITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHD   76 (86)
T ss_dssp             EETTEEEEEEESCBSSCCEEEEECS-SEEEECCCEEEECTTSSEEEEEEEEETTTTTCEEEEEET
T ss_pred             CCCCEEEEEEeeEECCCCEEEEEEC-CEEccCcEEeeeccCCcEEEEEEEecCCCCEEEEEEEEC
Confidence            3567999999996 43 46889998 5544332222 2234444333   336778899999864

>d1r0ah1 b.1.1.1 (H:1-123) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 6 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 6 [TaxId: 10090]

Probab=92.35  E-value=0.14  Score=40.63  Aligned_cols=62  Identities=23%  Similarity=0.422  Sum_probs=40.5

Q ss_pred             eEEecCCCeEEEEEEccCCC----CeEEEee--C-Ccccc-----CC---------CCceeec------ceEEEEeee--
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM----PFVKWRK--G-QNIEL-----TP---------DDKLPVG------RNVLTLDRV--  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~----p~i~W~k--~-~~~~~-----~~---------~~~~~~~------~~~l~i~~l--  165 (904)
                      -.+.+|++++|.|.++|...    ..+.|++  . ++.++     ..         ..|+.+.      ...|.|++|  
T Consensus        10 ~~vkpg~sv~LsC~~SG~s~s~~~y~~~W~RQ~pGkgle~i~~i~~~~~~~y~~~~k~Rftis~D~s~~~~~L~i~sl~~   89 (123)
T d1r0ah1          10 GIVQPSQPFRLTCTFSGFSLSTSGIGVTWIRQPSGKGLEWLATIWWDDDNRYNPSLKSRLTVSKDTSNNQAFLNMMTVET   89 (123)
T ss_dssp             SEECTTCCEEEEEEEESSCTTSTTEEEEEEEEETTSCCEEEEEEETTSCCEECTTTGGGEEEEEEGGGTEEEEEECSCCG
T ss_pred             ceECCCCCeEEEEEEcCCccCCCCCeeeccccCCCcceEeeeeecCCccccccceeeEEEEccccccceeEEcceeeccc
Confidence            56678999999999998542    2578987  2 11111     11         1244331      135999999  


Q ss_pred             cCCeEEEEEEE
Q psy8771         166 TESENYTCIAA  176 (904)
Q Consensus       166 ~d~g~Y~c~a~  176 (904)
                      +|...|.|...
T Consensus        90 eDsAvYyCAr~  100 (123)
T d1r0ah1          90 ADTAIYYCAQS  100 (123)
T ss_dssp             GGCEEEEEEEE
T ss_pred             ccceEEeeccc
Confidence            69999999754

>d1dlfh_ b.1.1.1 (H:) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 1 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 1 [TaxId: 10090]

Probab=92.18  E-value=0.37  Score=37.72  Aligned_cols=62  Identities=18%  Similarity=0.472  Sum_probs=41.3

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----cCC-------------CCceeec------ceEEEEeee-
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----LTP-------------DDKLPVG------RNVLTLDRV-  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~~~-------------~~~~~~~------~~~l~i~~l-  165 (904)
                      -.+.+|++++|.|+++|...  -.+.|.+  .+ +.+    +..             ..|+.+.      ...|.|.+| 
T Consensus        10 ~~vkpG~sl~LsC~~SG~s~~~y~~~WvRQ~PGkglEwv~~i~~~~~~~~~~ya~s~kgRftiS~D~s~n~~~L~~~~L~   89 (120)
T d1dlfh_          10 GLVQPGGSMKLSCATSGFTFSDAWMDWVRQSPEKGLEWVAEIRNKANNHATYYAESVKGRFTISRDDSKRRVYLQMNTLR   89 (120)
T ss_dssp             CEECTTCCEEEEEEEESSCTTTCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred             ceECCCCCeEEEEEECCccCcCCceEeeeeCCCcceeeeeeccccccccceeechhceecceeecccccceeccceeecc
Confidence            45678999999999998754  4678987  21 111    110             1244431      136889999 


Q ss_pred             -cCCeEEEEEEE
Q psy8771         166 -TESENYTCIAA  176 (904)
Q Consensus       166 -~d~g~Y~c~a~  176 (904)
                       +|.+.|.|...
T Consensus        90 ~eDtAvYYCA~~  101 (120)
T d1dlfh_          90 AEDTGIYYCTGI  101 (120)
T ss_dssp             GGGCEEEEEEEE
T ss_pred             CCCceEEEeeEe
Confidence             69999999654

>d1a21a1 b.1.2.1 (A:4-106) Extracellular region of human tissue factor {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=92.16  E-value=0.33  Score=37.17  Aligned_cols=50  Identities=10%  Similarity=0.095  Sum_probs=31.9

Q ss_pred             eeEEEEEEeCCccccceE-EecccceEEEeC--CCC-CcEEEEEEEEEcCCCCCC
Q psy8771         652 ISYELYWNDTYAKAKHHR-RIGLVETYSLTG--LYP-NTLYYIWLAAQSPRGEGA  702 (904)
Q Consensus       652 ~~y~v~~~~~~~~~~~~~-~~~~~~~~~l~~--L~p-~t~Y~v~V~a~~~~G~~~  702 (904)
                      ..|.|+|...++ .+... .......+.|.+  |.+ ...|.++|+|....+.+.
T Consensus        27 ~~YtVqy~~~~~-~W~~~C~nit~~~CDlt~~~~~~~~~~Y~aRVra~~~~~~s~   80 (103)
T d1a21a1          27 HVYTVQISTRLE-NWKSKCFLTAETECDLTDEVVKDVGQTYMARVLSYPARNGNT   80 (103)
T ss_dssp             EEEEEEEECSSS-CCEEEEEEESSSEEECHHHHTTCTTSCBEEEEEEEECCC--C
T ss_pred             eEEEEEEEecCC-CccccccCcCcceecCcccccccCCCCEEEEEEEecCCCccc
Confidence            468999887654 34322 233456788864  445 468999999998866543

>d1lmka1 b.1.1.1 (A:2-127) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=92.04  E-value=0.11  Score=41.15  Aligned_cols=61  Identities=20%  Similarity=0.398  Sum_probs=41.5

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--CC-ccc----c-CC----------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--GQ-NIE----L-TP----------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~~-~~~----~-~~----------~~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|...-  .+.|.+  .+ +.+    + ..          ..|+.+      +...|.|.+|  +
T Consensus         9 ~~~kPg~sl~LsC~~SG~~~~~y~~~WvRQ~PGkglEwvg~i~~~~~~~~y~~s~kgRfTiS~D~s~nt~yL~m~~L~~e   88 (126)
T d1lmka1           9 ELMKPGRSLKISCKTTGYIFSNYWIEWVKQRPGHGLEWIGKILPGGGSNTYNDKFKGKATFTADTSSNIAYMQLSSLTSE   88 (126)
T ss_dssp             EEECTTCCEEEEEEEESSCTTTEEEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCeEEEEEEccCCCCCCCCcceeeCCCccceeeeecCccccchhhhhhhccceEEEecCCccEEEeeecccCCC
Confidence            677899999999999997653  578887  21 111    1 11          134333      1236889999  7


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        89 DTAvYYCAr   97 (126)
T d1lmka1          89 DSAVYYCAR   97 (126)
T ss_dssp             GCEEEEEEE
T ss_pred             cceEEEEee
Confidence            999999964

>d1n0xh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=92.02  E-value=0.079  Score=42.06  Aligned_cols=61  Identities=16%  Similarity=0.395  Sum_probs=41.4

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--CC-ccc----cC-CC----------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--GQ-NIE----LT-PD----------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~~-~~~----~~-~~----------~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|....  .+.|.+  .+ +.+    +. .+          .|+.+.      ...|.|.+|  +
T Consensus        10 ~~~kpg~sl~lsC~~SG~~~~~y~~~WvRQ~PGkglew~g~i~~~~~~~~ya~s~kgR~tiS~D~s~nt~yL~~~~L~~e   89 (127)
T d1n0xh1          10 EVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSA   89 (127)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCCCCCEEEEEeCCCCcceeeeecCccccccccchhccccceEecccCceEEEEEEEccCCC
Confidence            677899999999999997653  578987  21 111    11 11          244331      235889999  6


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|.-
T Consensus        90 DtAvYYCAR   98 (127)
T d1n0xh1          90 DTAVYYCAR   98 (127)
T ss_dssp             GCEEEEEEE
T ss_pred             CceEEEEEe
Confidence            999999953

>d1sjva_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh {Llama (Lama glama) [TaxId: 9844]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Camelid IG heavy chain variable domain, VHh
species: Llama (Lama glama) [TaxId: 9844]

Probab=92.02  E-value=0.15  Score=39.14  Aligned_cols=60  Identities=20%  Similarity=0.506  Sum_probs=38.1

Q ss_pred             EEecCCCeEEEEEEccCCC--CeEEEeeCC-ccc------cCC----------CCceeec------ceEEEEeee--cCC
Q psy8771         116 EVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NIE------LTP----------DDKLPVG------RNVLTLDRV--TES  168 (904)
Q Consensus       116 ~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~~------~~~----------~~~~~~~------~~~l~i~~l--~d~  168 (904)
                      .+.+|++++|.|+++|...  ..+.|.+.. |..      +..          ..|+.+.      .-.|.|.+|  +|.
T Consensus         4 lvkPG~sl~LsC~~SG~~~~~~~~~WvRQ~PGkglewi~~i~~~g~t~y~~~~kgR~tiSrd~s~n~~~L~i~~l~~eDt   83 (107)
T d1sjva_           4 LVQAGESLKLSCAASGNTFSGGFMGWYRQAPGKQRELVATINSRGITNYADFVKGRFTISRDNAKKTVYLEMNSLEPEDT   83 (107)
T ss_dssp             CCCTTCCEEEEECCCC-----CCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTCEEEEECTTTCCEEEEECSCCGGGC
T ss_pred             EecCCCCcEEEEEECCCCccCCcEEEEEeCCccceeeeeeeeeccccccccccccceEEecCCceeEEEEeecCCCcccc
Confidence            3568999999999998643  457898721 111      111          1244431      236999999  699


Q ss_pred             eEEEEEE
Q psy8771         169 ENYTCIA  175 (904)
Q Consensus       169 g~Y~c~a  175 (904)
                      +.|.|..
T Consensus        84 AvYyCA~   90 (107)
T d1sjva_          84 AVYYCYT   90 (107)
T ss_dssp             SEEEEEE
T ss_pred             eeeeEec
Confidence            9999964

>d1rhhb1 b.1.1.1 (B:3-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=92.01  E-value=0.2  Score=39.98  Aligned_cols=62  Identities=16%  Similarity=0.317  Sum_probs=41.6

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----cC-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----LT-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|.++|...  -.+.|.+  .+ +.+    +. .          ..|+.+.      .-.|.|.+|  +
T Consensus         9 ~~~kPg~sl~LsC~~SG~~~~~~~~~WvRQ~PGkglewig~i~~~~g~~~y~~~~kgR~tis~D~s~~tv~L~~~~L~~e   88 (130)
T d1rhhb1           9 EVKKPGSSVQVSCKASGGTFSMYGFNWVRQAPGHGLEWMGGIIPIFGTSNYAQKFRGRVTFTADQATSTAYMELTNLRSD   88 (130)
T ss_dssp             EEECTTCCEEEEEEETTSCCTTCEEEEEEECTTSCEEEEEEEEGGGTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCeEEEEEEeCCCccCCCcceEEeCCccCcEEEeecCCcccccccccceeeeeEEeccCCccEEEEEeeccCCC
Confidence            56789999999999999754  3578987  21 111    11 0          1244331      125888999  7


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        89 DtAvYyCAr~   98 (130)
T d1rhhb1          89 DTAVYYCARD   98 (130)
T ss_dssp             GCEEEEEEEE
T ss_pred             CcEEEEEEee
Confidence            9999999754

>d1bz7b1 b.1.1.1 (B:1-122) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]

Probab=91.92  E-value=0.14  Score=40.52  Aligned_cols=63  Identities=17%  Similarity=0.357  Sum_probs=41.9

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--C-Cccc----cC-C----------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--G-QNIE----LT-P----------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~-~~~~----~~-~----------~~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|+++|...  -.+.|.+  . ++.+    +. .          ..|+.+      +...|.|.+|  +
T Consensus        10 ~lvkPg~sl~LsC~~SG~s~s~y~~~WvRQ~PGkglewl~~i~~~~~~~~Y~~s~kgRftiSrD~s~~t~yL~m~sL~~e   89 (122)
T d1bz7b1          10 GLVQPGGSRKLSCAASGFTFSNFGMHWVRQAPEKGLEWVAYISSGGSSINYADTVKGRFTISRDNPKNTLFLQMTSLRSE   89 (122)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECSSSCEEEEEEECSSSSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred             ceECCCCCeEEEEEEcCCCCcCCceEccccCCCcceeeeeecCcccccccccceeeeeEEEeccCCccEeEeeeeeeccc
Confidence            55678999999999999765  3578887  2 1111    11 1          134433      1236888999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |.+.|.|....
T Consensus        90 DTAvYYCAr~~  100 (122)
T d1bz7b1          90 DTAIYYCTRGG  100 (122)
T ss_dssp             GCEEEEEEEEC
T ss_pred             CceEEEeecCC
Confidence            99999996543

>d2fx7h1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=91.85  E-value=0.15  Score=40.41  Aligned_cols=63  Identities=17%  Similarity=0.373  Sum_probs=41.5

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----cC-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----LT-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+.+.|.|.++|...  -.+.|.+  .+ +.+    +. .          ..|+.+.      ...|.|++|  +
T Consensus        10 ~~~kPg~sl~LsC~~SG~s~~~y~~~WvRQ~PGkglew~g~i~~~~~~~~y~~s~kgR~tiSrD~s~~t~yL~~~sL~~e   89 (127)
T d2fx7h1          10 EVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNYAPRFQGRITITADRSTSTAYLELNSLRPE   89 (127)
T ss_dssp             EEECTTCCEEEEEEEESSCSTTSCEEEEEECTTCCEEEEEEEEGGGTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCCCCCeEEEEeCCCCcceeeeccCcccccccccceeeeeEEEeccCccceEeeeecccCcc
Confidence            45678999999999998654  3578887  21 111    11 1          1243331      236889999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |.+.|.|....
T Consensus        90 DTavYYCAR~~  100 (127)
T d2fx7h1          90 DTAVYYCAREG  100 (127)
T ss_dssp             GCEEEEEEEEE
T ss_pred             cceEEEEeecc
Confidence            99999997543

>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Tyrosine-protein kinase receptor tyro3, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.82  E-value=0.17  Score=38.18  Aligned_cols=28  Identities=0%  Similarity=0.082  Sum_probs=24.8

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.|.++++.+.+.|+|.|.|..|..
T Consensus        53 ~~~L~I~~~~~~D~G~Y~C~a~N~~G~~   80 (91)
T d1rhfa1          53 IGFLSLKSVERSDAGRYWCQVEDGGETE   80 (91)
T ss_dssp             EEEEEESSCCGGGCEEEEEEESSCTTCE
T ss_pred             eeeEEECCCCcccCEEEEEEEEECCCCE
Confidence            3578999999999999999999998853

>d1ieha_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh {Llama (Lama glama) [TaxId: 9844]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Camelid IG heavy chain variable domain, VHh
species: Llama (Lama glama) [TaxId: 9844]

Probab=91.82  E-value=0.11  Score=41.55  Aligned_cols=63  Identities=19%  Similarity=0.399  Sum_probs=42.1

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--C-Cccc----cC-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--G-QNIE----LT-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~-~~~~----~~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|+++|...  ..+.|.+  . ++.+    +. .          ..|+.+.      ...|.|.+|  +
T Consensus        10 ~lvkPG~Sl~LsC~~SG~s~~~y~~~WvRQ~PGkgLEWlg~I~~~~~~~~Ya~s~kgRfTiSrD~s~~t~yL~i~~L~~e   89 (135)
T d1ieha_          10 GLVQPGGSLRVSCAASGFTFSSYHMAWVRQAPGKGLEWVSTINPGDGSTYYADSVKGRFTISRDNAKNTLYLQMNSLKSE   89 (135)
T ss_dssp             CEECTTCEEEEEEEEESSCTTTSCEEEEEECSSCCCEEEEEECSSSCCEEECSTTTTTEEEEECTTTCCEEEEEESCCSS
T ss_pred             ceECCCCCeEEEEEEcCCCCcCCceeccccCCCCceeeeeccCCccccccccccceEeEEEeccCCCceeEecEeeeCcc
Confidence            56779999999999999754  4588987  2 1211    11 1          1244331      236899999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |.+.|.|....
T Consensus        90 DTAvYYCAr~~  100 (135)
T d1ieha_          90 DTAVYYCAKYS  100 (135)
T ss_dssp             SCEEEEEEEBS
T ss_pred             cceeeEEEEec
Confidence            99999996543

>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Vascular cell adhesion molecule-1 (VCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.72  E-value=0.13  Score=38.78  Aligned_cols=30  Identities=17%  Similarity=-0.010  Sum_probs=26.4

Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      .....+.|.++...+.+.|+|.|.|..|..
T Consensus        51 ~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~   80 (90)
T d1vcaa2          51 GTTSTLTMNPVSFGNEHSYLCTATCESRKL   80 (90)
T ss_dssp             TTEEEEEESSCCGGGCSEEEEEEEETTEEE
T ss_pred             cCCcEEEEecccccccceEEEEEEeCCCEE
Confidence            445779999999999999999999998864

>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=91.71  E-value=0.057  Score=41.01  Aligned_cols=70  Identities=16%  Similarity=0.058  Sum_probs=41.3

Q ss_pred             CcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         204 PLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       204 p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      |.++.+...  ..++|.+...+.+...  |.|...++.....  .......|.|.++...+.+.|+|.|.|..|..
T Consensus        12 p~~~~~~~G--~~v~l~C~~~g~P~p~--i~W~k~~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~   81 (91)
T d1cs6a3          12 PADTYALTG--QMVTLECFAFGNPVPQ--IKWRKLDGSQTSK--WLSSEPLLHIQNVDFEDEGTYECEAENIKGRD   81 (91)
T ss_dssp             CSEEEEETT--CCEEEECEEEEESCCE--EEEEECCSCCSCC--CSBSSSEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred             CCcEEEecC--CcEEEEEEEEEccCCE--EEEEecccccceE--eeeeeeEEEeCCCCccCCEEEEEEEEECCCEE
Confidence            445544433  3455555544333322  3444432222111  12234679999999999999999999999864

>d1ol0a_ b.1.1.1 (A:) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Engineered (including hybrid species)

Probab=91.71  E-value=0.12  Score=40.71  Aligned_cols=62  Identities=19%  Similarity=0.362  Sum_probs=41.2

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----cCCC-----------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----LTPD-----------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~~~~-----------~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+.+.|.|.++|...  -.+.|.+  .+ +.+    +..+           .|+.+.      ...|.|++|  +
T Consensus        10 ~~vkpg~sl~LsC~~SG~s~s~y~~~W~RQ~PGkglewlg~i~~~~~~~~y~~~~kgR~tis~D~s~~~~~L~i~sL~~e   89 (121)
T d1ol0a_          10 GLVQPGGSLRLSCAASGFTFSSYAMSWFRQAPGKEREIVSAVSGSGGSTYYADSVRGRFTISRDNSKNTLYLQMNSLRAE   89 (121)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCeEEEEEEcCcCCcCCceEcceeCCCcceeeeeecCCcccccccchheeeeeEEeccccceeEEeeeeecccc
Confidence            45688999999999998653  3578986  21 111    1111           244331      236999999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DtAvYYCAr~   99 (121)
T d1ol0a_          90 DTAVYYCARE   99 (121)
T ss_dssp             GCEEEEEEEC
T ss_pred             cceEEEEEEe
Confidence            9999999654

>d2nxyd1 b.1.1.1 (D:3001-3128) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=91.70  E-value=0.15  Score=40.54  Aligned_cols=63  Identities=19%  Similarity=0.362  Sum_probs=42.2

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--CC-ccc----c-CC----------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--GQ-NIE----L-TP----------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~~-~~~----~-~~----------~~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|....  .+.|.+  .+ +.+    + ..          ..|+.+      +...|.|.+|  +
T Consensus        10 ~~~kpg~sl~LsC~~SG~s~~~y~~~WvRQ~PGkglewig~i~~~~~~~~ya~s~kgR~tiS~D~s~~t~yL~~~sL~~e   89 (128)
T d2nxyd1          10 EVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVYLELRNLRSD   89 (128)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGEEEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCccCCCcccceeCCCcceeeeeecCCcccccccccceeEEEEEeecCCCceEEeeeeecccc
Confidence            567899999999999997654  478876  21 111    1 11          134443      1235888999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |.+.|.|....
T Consensus        90 DTA~YYCAr~~  100 (128)
T d2nxyd1          90 DTAVYFCAGVY  100 (128)
T ss_dssp             GCEEEEEEEEE
T ss_pred             CceEEEEeEEe
Confidence            99999997653

>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Myosin-binding protein C, slow-type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.68  E-value=0.28  Score=38.75  Aligned_cols=37  Identities=5%  Similarity=-0.205  Sum_probs=29.7

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT  288 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~  288 (904)
                      ...|.|.++++.+.+.|+|.|.|..|....+..+.+.
T Consensus        67 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~  103 (113)
T d2dava1          67 TFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVH  103 (113)
T ss_dssp             EEEEEECSCCTTSCEEEEEEEECSSCEEEECCEEEEE
T ss_pred             EEEEEEccCCHHHCeEEEEEEEeCCCEEEEEEEEEEE
Confidence            3569999999999999999999999976544444443

>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Titin
species: Human (Homo sapiens), different modules [TaxId: 9606]

Probab=91.68  E-value=0.078  Score=40.91  Aligned_cols=30  Identities=13%  Similarity=0.164  Sum_probs=26.3

Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ....|.|.++...+.+.|+|.|.|..|...
T Consensus        59 ~~~~L~I~~~~~~D~G~Y~c~a~N~~G~~~   88 (98)
T d1g1ca_          59 NVCELVIRDVTGEDSASIMVKAINIAGETS   88 (98)
T ss_dssp             TEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             eEEEEEeccCccccCEEEEEEEEECCcEEE
Confidence            346799999999999999999999998643

>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Junction adhesion molecule, JAM, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.65  E-value=0.13  Score=40.66  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=29.4

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEE
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVI  287 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~  287 (904)
                      ...+.|.+++..+.+.|+|.|.|..|....+..+.+
T Consensus        66 ~~~l~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~v~l  101 (110)
T d1f97a2          66 SGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHM  101 (110)
T ss_dssp             TCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEE
T ss_pred             ccceEECCCCccCCEEEEEEEEECCCcEEEEEEEEE
Confidence            357899999999999999999999998655544443

>d1rihh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=91.58  E-value=0.11  Score=41.48  Aligned_cols=62  Identities=21%  Similarity=0.434  Sum_probs=41.4

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----c-CCC----------Cceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----L-TPD----------DKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~-~~~----------~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|+++|...  -.+.|.+  .+ +.+    + ...          .|+.+      +.-.|.|++|  +
T Consensus        10 ~l~kPg~sl~LsC~~SG~~~~~y~~~WvRQ~pGkglewlg~i~~~~~~~~ya~s~~~R~tis~D~s~n~vyL~l~sL~~e   89 (125)
T d1rihh1          10 ELAKPGASMKMSCRASGYSFTSYWIHWLKQRPDQGLEWIGYIDPATAYTESNQKFKDKAILTADRSSNTAFMYLNSLTSE   89 (125)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEccCCCCCCCCccccCCCCccceeeeecCCccccccccccceeeeEEecccCcceEeeeeeccCcc
Confidence            56789999999999998764  3578887  21 111    1 111          24333      1235889999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DtAvYYCAR~   99 (125)
T d1rihh1          90 DSAVYYCARE   99 (125)
T ss_dssp             GCEEEEEEEE
T ss_pred             cceEEEEeee
Confidence            9999999754

>d1dn0b2 b.1.1.2 (B:121-225) Immunoglobulin heavy chain mu constant domain 1, CH1-mu {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain mu constant domain 1, CH1-mu
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.56  E-value=0.31  Score=37.80  Aligned_cols=65  Identities=15%  Similarity=0.164  Sum_probs=37.3

Q ss_pred             ecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCc---eeecceEEEEe------eec-C---CeEEEEEEEecCcce
Q psy8771         118 MLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDK---LPVGRNVLTLD------RVT-E---SENYTCIAASVLGVI  182 (904)
Q Consensus       118 ~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~---~~~~~~~l~i~------~l~-d---~g~Y~c~a~n~~g~~  182 (904)
                      ...+.++|.|.+.| .|. ..|+|.++ +........   ....++.+.+.      .-+ +   ...|+|.+....+..
T Consensus        19 ~~~~~~~l~Cl~~gF~P~~i~v~W~~~-~~~~~~~~~~~~~~~~~gtys~~S~L~v~~~eW~~~~~~~ytC~V~H~~~~~   97 (105)
T d1dn0b2          19 SDTSSVAVGCLAQDFLPDSITFSWKYK-NNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNK   97 (105)
T ss_dssp             --CCSEEEEEEEEEEBSSCCEEEEEET-TSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCE
T ss_pred             CCCCceEEEEEEecccCCcEEEEEEEC-CccccCCEEcceEEccCCCEEEEEEEEEcHHHhccCCCCEEEEEEEECCCCE
Confidence            35688999999999 565 57999998 433322111   11133333332      222 2   247999998766543


Q ss_pred             E
Q psy8771         183 E  183 (904)
Q Consensus       183 ~  183 (904)
                      .
T Consensus        98 ~   98 (105)
T d1dn0b2          98 E   98 (105)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1dfbh1 b.1.1.1 (H:1-126) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 3 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 3 [TaxId: 9606]

Probab=91.54  E-value=0.16  Score=40.26  Aligned_cols=63  Identities=19%  Similarity=0.404  Sum_probs=41.8

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeC--C-ccc----cC-CC----------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKG--Q-NIE----LT-PD----------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~--~-~~~----~~-~~----------~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|.++|...  ..+.|.+-  + +.+    +. .+          .|+.+.      ...|.|.+|  +
T Consensus        10 ~~vkPg~sl~LsC~~SG~~~~~y~~~WvRQ~PGkglewl~~i~~~~~~~~y~~s~kgR~tiS~D~s~nt~~L~~~~L~~e   89 (126)
T d1dfbh1          10 GLVQPGRSLRLSCAASGFTFNDYAMHWVRQAPGKGLEWVSGISWDSSSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAE   89 (126)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSSEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCeEEEEEECCccccCCcceeceeCCCccceeeeecCcccccchhccccccceEEeccCCCcEEEeeeeeeccC
Confidence            56789999999999999764  35788872  1 111    11 11          233331      135889999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |.+.|.|....
T Consensus        90 DtavYYCAr~~  100 (126)
T d1dfbh1          90 DMALYYCVKGR  100 (126)
T ss_dssp             GCEEEEEEEEE
T ss_pred             cceEEEEEecc
Confidence            99999996543

>d1ow0a1 b.1.1.2 (A:242-342) Immunoglobulin heavy chain alpha constant domain 2, CH2-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain alpha constant domain 2, CH2-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.52  E-value=0.018  Score=44.91  Aligned_cols=62  Identities=18%  Similarity=0.289  Sum_probs=38.2

Q ss_pred             EecCCCeEEEEEEccC--CC-CeEEEeeCCccccCCCCceeecceEEEEee-e-------cCCeEEEEEEEec
Q psy8771         117 VMLDSPLNLSCVAVGS--PM-PFVKWRKGQNIELTPDDKLPVGRNVLTLDR-V-------TESENYTCIAASV  178 (904)
Q Consensus       117 ~~~g~~~~l~C~~~g~--p~-p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~-l-------~d~g~Y~c~a~n~  178 (904)
                      +..++.++|.|.+.|.  |. ..|+|.++++............++.+.+.. |       ..+..|+|.+...
T Consensus        15 ~~~~~~~tL~C~v~~f~~p~~i~v~W~~~~~~~~~~~~~~~~~~gt~s~~S~L~v~~~~W~~g~~ftC~V~H~   87 (101)
T d1ow0a1          15 LLLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYP   87 (101)
T ss_dssp             HHHCSSCCCEEEETTCCSCCCCCCCBSSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEECCS
T ss_pred             HccCCCeEEEEEEeCCCCCcceEEEEEECCceeeeecceEECCCCCEEEEEEEEEcHHHcCCCCeEEEEEEeC
Confidence            4567899999999995  44 479999884422211111223444444432 2       2478999999753

>d1ad9b1 b.1.1.1 (B:1-113) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Engineered (including hybrid species)

Probab=91.44  E-value=0.19  Score=39.40  Aligned_cols=62  Identities=16%  Similarity=0.403  Sum_probs=41.6

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--CC-ccc----cC-CC----------Cceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--GQ-NIE----LT-PD----------DKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~~-~~~----~~-~~----------~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|.++|....  .+.|.+  .+ +.+    +. ..          .|+.+      +...|+|.+|  +
T Consensus        10 ~~vkpg~sl~LsC~vSG~s~~~~~~~WvRQ~PGkglEwvg~i~~~~~~~~y~~s~kgRftiS~D~s~nt~~L~m~~L~~e   89 (120)
T d1ad9b1          10 EVKKPGSSVKVSCKASGYTFTDYYINWMRQAPGQGLEWIGWIDPGSGNTKYNEKFKGRATLTVDTSTNTAYMELSSLRSE   89 (120)
T ss_dssp             EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCcCCccccceECCCccceeeeecCCcccceeeccceeeeEEEEecCcceEEeccccccCCC
Confidence            567899999999999997653  678887  21 111    11 11          23333      1236888999  7


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DTAvYYCAr~   99 (120)
T d1ad9b1          90 DTAFYFCARE   99 (120)
T ss_dssp             GCEEEEEEEE
T ss_pred             cceEEEEEEc
Confidence            9999999653

>d1rzfh1 b.1.1.1 (H:2-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=91.37  E-value=0.24  Score=39.59  Aligned_cols=65  Identities=18%  Similarity=0.366  Sum_probs=42.7

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--CC-ccc----cC-C----------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--GQ-NIE----LT-P----------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~~-~~~----~~-~----------~~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|.++|...-  .+.|.+  .+ +.+    +. .          ..|+.+      +...|.|.+|  +
T Consensus         9 ~~vkPg~sl~LsC~~SG~~~s~y~~~WvRQ~PGkglEwvg~i~~~~~~~~y~~s~kgR~tis~D~s~~t~~L~~~~L~~e   88 (133)
T d1rzfh1           9 EVNKPGSSVKVSCQASGATLNSHAFSWVRQAPGQGLEWMAGIIPIFGSSHYAQKFRGRVTISADESTRTVYLHLRGLRSD   88 (133)
T ss_dssp             EEECTTCCEEEEEEESSSCSTTEEEEEEEECTTCCEEEEEEEEGGGTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCccCCCCccceECCCCceEEEeecCCccccccccccccccEEEEeccCcceeEEeeccCCCC
Confidence            567899999999999997653  478887  21 111    10 0          134433      1236888899  7


Q ss_pred             CCeEEEEEEEecC
Q psy8771         167 ESENYTCIAASVL  179 (904)
Q Consensus       167 d~g~Y~c~a~n~~  179 (904)
                      |.+.|.|......
T Consensus        89 DtA~YYCAr~~~~  101 (133)
T d1rzfh1          89 DTAVYYCASNSIA  101 (133)
T ss_dssp             GCEEEEEEEEECC
T ss_pred             CCEEEEeeeccCC
Confidence            9999999665433

>d1yedb1 b.1.1.1 (B:1-113) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

Probab=91.35  E-value=0.096  Score=41.31  Aligned_cols=62  Identities=23%  Similarity=0.410  Sum_probs=41.8

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--C-Cccc----cC-CC----------Cceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--G-QNIE----LT-PD----------DKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~-~~~~----~~-~~----------~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|....  .+.|.+  . ++.+    +. ..          .|+.+      +.-.|.|.+|  +
T Consensus        10 ~~~kPG~sl~LsC~~SG~~~~~y~~~WvRQ~PGkglEwv~~i~~~~~~~~y~~s~kgR~tiS~D~s~~t~~L~~~sL~~e   89 (124)
T d1yedb1          10 ELVRPGTSVKLSCKTSGYIFTSYWIHWLKQSSGQGLEWIARIYPGTGGTYYNEKFKGKATLTADKSSSTAYMQLSSLKSE   89 (124)
T ss_dssp             EEECTTCEEEEEEEEESSCGGGSCEEEEEECSSSCCEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEEESCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCccCCccccceECCCCceeeeeeccccccccccccccceeEEEEccCCcceEEecccccCCC
Confidence            567899999999999997653  588987  2 1211    11 11          24333      1235888999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DTAvYYCAR~   99 (124)
T d1yedb1          90 DSAVYFCTRW   99 (124)
T ss_dssp             GCEEEEEEEC
T ss_pred             cceEEEeccc
Confidence            9999999643

>d1rzga1 b.1.1.1 (A:1-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 1 [TaxId: 9606]

Probab=91.34  E-value=0.11  Score=41.43  Aligned_cols=62  Identities=16%  Similarity=0.361  Sum_probs=41.4

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--C-Cccc----cC-CC----------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--G-QNIE----LT-PD----------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~-~~~~----~~-~~----------~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|+++|...  ..+.|.+  . ++.+    +. .+          .|+.+.      .-.|.|++|  +
T Consensus        10 ~~~kPg~sl~LsC~~SG~~~s~y~~~WvRQ~PGkglewv~~i~~~~~~~~y~~s~kgR~tiS~D~s~~t~yL~~~sL~~e   89 (130)
T d1rzga1          10 EVKKPGSSVKVSCKASGGTFSNYAINWVRQAPGQGLEWMGGIIPIFNIAHYAQRFQGRVSITADESTSTAYMELSSLRSE   89 (130)
T ss_dssp             EEECTTCCEEEEEECCSSCGGGCCEEEEEECTTCCCEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCCCCceEccccCCCcceeeeeeccccccccccccccccceEEecccccceEEeeeeecCCC
Confidence            56789999999999998764  4688987  2 1111    11 11          233331      225888999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DtA~YYCAr~   99 (130)
T d1rzga1          90 DTAVFYCASP   99 (130)
T ss_dssp             GCEEEEEEEC
T ss_pred             ccEEEEEEEe
Confidence            9999999753

>d1rjca1 b.1.1.1 (A:2-127) Camelid IG heavy chain variable domain, VHh {Camel (Camelus dromedarius) [TaxId: 9838]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Camelid IG heavy chain variable domain, VHh
species: Camel (Camelus dromedarius) [TaxId: 9838]

Probab=91.31  E-value=0.17  Score=40.16  Aligned_cols=63  Identities=21%  Similarity=0.424  Sum_probs=41.1

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeCC-ccc------cC-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKGQ-NIE------LT-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~-~~~------~~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|...  -.+.|.+-- |..      +. .          ..|+.+.      ...|.|++|  +
T Consensus         9 ~lvkPg~sl~LsC~~SG~~~s~y~~~WvRQ~PGkglewl~~i~~~~~~~~y~~~~kgR~tis~D~s~~~~~L~i~~l~~e   88 (126)
T d1rjca1           9 GSVQAGQSLRLSCATSGATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDNAKNTLYLQMNSLKPE   88 (126)
T ss_dssp             EEECTTCCEEEEEECC-CTTTCSEEEEEEECTTSCCEEEEEEETTTCCEEECTTTTTTEEEEEEC--CEEEEEECSCCGG
T ss_pred             ceECCCCCeEEEEEECCCCCcCCceEeeeeCCCcceEeeeccccccccccccccceeeEEEEecCCceEEEEEEeccCcc
Confidence            56779999999999998654  457898721 211      11 1          1244431      234899999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |.+.|.|....
T Consensus        89 DTAvYYCAr~~   99 (126)
T d1rjca1          89 DTAMYYCAADT   99 (126)
T ss_dssp             GCEEEEEEECC
T ss_pred             cCceeEEEeec
Confidence            99999997543

>d1ogae2 b.1.1.2 (E:119-245) T-cell antigen receptor {Human (Homo sapiens), beta-chain [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: T-cell antigen receptor
species: Human (Homo sapiens), beta-chain [TaxId: 9606]

Probab=91.30  E-value=0.084  Score=43.02  Aligned_cols=74  Identities=18%  Similarity=0.370  Sum_probs=42.4

Q ss_pred             CCCeEEcC-CCCceEEecCCCeEEEEEEcc-CCC-CeEEEeeCCccccCCCCce---------eecceE------EEEee
Q psy8771         103 VPPQFSIP-PPALLEVMLDSPLNLSCVAVG-SPM-PFVKWRKGQNIELTPDDKL---------PVGRNV------LTLDR  164 (904)
Q Consensus       103 ~~P~~~~~-~~~~~~~~~g~~~~l~C~~~g-~p~-p~i~W~k~~~~~~~~~~~~---------~~~~~~------l~i~~  164 (904)
                      .||.+... |.. .....+..++|.|.+.| .|. ..|+|+++ |..+......         ...+++      |.|..
T Consensus         3 ~PP~V~l~~Ps~-~e~~~~~~~tL~C~v~gf~P~~i~v~W~~~-g~~~~~~~~t~~~~~~~~~~~~d~tys~sS~L~v~~   80 (127)
T d1ogae2           3 FPPEVAVFEPSE-AEISHTQKATLVCLATGFYPDHVELSWWVN-GKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSA   80 (127)
T ss_dssp             BCCEEEEECCCH-HHHHHHSEEEEEEEEEEEBSSCEEEEEEET-TEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEH
T ss_pred             cCCEEEEECCCH-HHhccCCcEEEEEEEEeccCCCeEEEEEEC-CEEccCcEEecceeeeecccCCCCeEEEEEEEEECH
Confidence            46665432 222 33345678999999999 454 36899999 6555432110         012333      33332


Q ss_pred             e--cC-CeEEEEEEEec
Q psy8771         165 V--TE-SENYTCIAASV  178 (904)
Q Consensus       165 l--~d-~g~Y~c~a~n~  178 (904)
                      -  ++ +..|+|.+...
T Consensus        81 ~~W~~~g~~ytC~V~H~   97 (127)
T d1ogae2          81 TFWQNPRNHFRCQVQFY   97 (127)
T ss_dssp             HHHTCTTCEEEEEEEEC
T ss_pred             HHhCCCCCEEEEEEEEC
Confidence            2  24 45799999753

>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Mucosal addressin cell adhesion molecule-1 (MADCAM-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.2  Score=37.67  Aligned_cols=29  Identities=17%  Similarity=-0.078  Sum_probs=25.4

Q ss_pred             ceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         250 IITTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      .....|.|.++...+.+.|+|.|.|+.|.
T Consensus        52 ~~~~~L~i~~v~~~D~G~Y~C~Asn~~g~   80 (90)
T d1gsma1          52 TGRSVLTVRNASLSAAGTRVCVGSCGGRT   80 (90)
T ss_dssp             SSEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred             CceeeEEcCccChhhCCcEEEEEEeCCCc
Confidence            33477999999999999999999998774

>d1tjgh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Engineered (including hybrid species)

Probab=91.13  E-value=0.39  Score=38.58  Aligned_cols=63  Identities=24%  Similarity=0.418  Sum_probs=41.4

Q ss_pred             eEEecCCCeEEEEEEccCCC----CeEEEeeCC-cccc-------CC---------CCceeec------ceEEEEeee--
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM----PFVKWRKGQ-NIEL-------TP---------DDKLPVG------RNVLTLDRV--  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~----p~i~W~k~~-~~~~-------~~---------~~~~~~~------~~~l~i~~l--  165 (904)
                      -.+.+|+.++|.|.++|...    ..+.|++-. |..+       ..         ..|+.+.      .-.|.|.+|  
T Consensus        10 ~~vkpg~Sl~LsC~~SG~~~s~~~~~~~WyRQ~pG~~le~l~~i~~~~~~~y~~~~k~Rftis~d~s~~~~~L~i~~l~~   89 (132)
T d1tjgh1          10 PLVKPTQTLTLTCSFSGFSLSDFGVGVGWIRQPPGKALEWLAIIYSDDDKRYSPSLNTRLTITKDTSKNQVVLVMTRVSP   89 (132)
T ss_dssp             SEECTTCCEEEEEEEESSCTTSTTCEEEEEEECTTSCCEEEEEEETTSCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred             eeECCCCCeEEEEEEeCCCcCCCCCceEEEEECCCcccEEEEEecCCCccEeeeeeeecceecccccccEEEcccccCCc
Confidence            45778999999999998542    358899721 1111       00         1344431      135899999  


Q ss_pred             cCCeEEEEEEEe
Q psy8771         166 TESENYTCIAAS  177 (904)
Q Consensus       166 ~d~g~Y~c~a~n  177 (904)
                      +|.+.|.|....
T Consensus        90 eDtAvYYCAr~~  101 (132)
T d1tjgh1          90 VDTATYFCAHRR  101 (132)
T ss_dssp             GGCEEEEEEEEC
T ss_pred             ccceEEEEEEec
Confidence            699999997553

>d3cx5j1 b.1.1.1 (J:1-127) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]

Probab=91.12  E-value=0.16  Score=40.32  Aligned_cols=62  Identities=23%  Similarity=0.500  Sum_probs=41.2

Q ss_pred             eEEecCCCeEEEEEEccCCC---CeEEEee--CC-ccc----c-CC---------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM---PFVKWRK--GQ-NIE----L-TP---------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~---p~i~W~k--~~-~~~----~-~~---------~~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|.++|...   ..+.|.+  .+ +.+    + ..         ..|+.+      +...|.|.+|  +
T Consensus        10 ~lvkPg~sl~LsC~~SG~s~~s~y~~~WvRQ~PGkglewl~~i~~~g~~~y~~s~kgR~tis~d~s~nt~yL~l~~l~~e   89 (127)
T d3cx5j1          10 GLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRDTSKNQFFLKLNSVTTE   89 (127)
T ss_dssp             SEECTTSCEEEEEEEESSCTTTSSEEEEEEEETTTEEEEEEEEETTSCEEECTTTTTTBCCEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEEecccccCCCcceeeeECCCcchheeeeecccccchhcccccccceeecccccceeecceeccccc
Confidence            45678999999999999754   3688987  21 211    1 01         123332      1236899999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |.+.|.|...
T Consensus        90 DtAvYyCAr~   99 (127)
T d3cx5j1          90 DTATYYCARS   99 (127)
T ss_dssp             GCEEEEEEEE
T ss_pred             cceEEEeeee
Confidence            9999999653

>d2fb4h1 b.1.1.1 (H:1-119) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 3 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 3 [TaxId: 9606]

Probab=91.08  E-value=0.18  Score=40.10  Aligned_cols=63  Identities=19%  Similarity=0.363  Sum_probs=41.6

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeC---Cccc----cC-CC----------Cceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKG---QNIE----LT-PD----------DKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~---~~~~----~~-~~----------~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|+.++|.|+++|...  ..+.|.+-   ++.+    +. .+          .|+.+      +...|.|++|  +
T Consensus        10 ~~~kpg~sl~LsC~~SG~~~~~~~~~WvRQ~PGkglEw~~~i~~~~~~~~y~~~~kgR~Tis~D~s~~t~yL~~~~L~~e   89 (127)
T d2fb4h1          10 GVVQPGRSLRLSCSSSGFIFSSYAMYWVRQAPGKGLEWVAIIWDDGSDQHYADSVKGRFTISRNDSKNTLFLQMDSLRPE   89 (127)
T ss_dssp             CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECGGGBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCeEEEEEECCCCccCCceeeeecCCCcceeeeeecccccccchhcccccceEEEeccCCccEEEeeeeeeeec
Confidence            45678999999999999754  35788872   1111    11 11          23333      1236889999  6


Q ss_pred             CCeEEEEEEEe
Q psy8771         167 ESENYTCIAAS  177 (904)
Q Consensus       167 d~g~Y~c~a~n  177 (904)
                      |.+.|.|....
T Consensus        90 DTA~YYCAr~~  100 (127)
T d2fb4h1          90 DTGVYFCARDG  100 (127)
T ss_dssp             GCEEEEEEEEC
T ss_pred             ceeEEEEEEec
Confidence            99999997654

>d1lo4h1 b.1.1.1 (H:1-118) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.1 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 2.1 [TaxId: 10090]

Probab=91.03  E-value=0.25  Score=38.56  Aligned_cols=63  Identities=21%  Similarity=0.385  Sum_probs=41.9

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEeeC---Cccc----cCCC----------Cceeec------ceEEEEeee--cC
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRKG---QNIE----LTPD----------DKLPVG------RNVLTLDRV--TE  167 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k~---~~~~----~~~~----------~~~~~~------~~~l~i~~l--~d  167 (904)
                      -.+.+|++++|.|.++|...  -.+.|.+.   .+.+    +..+          .|+.+.      ...|.|.+|  +|
T Consensus        10 ~~vkPG~Sl~LsC~~SG~~~~~y~~~WvRQ~PGkglEwl~~i~~~g~t~y~~s~kgR~tiSrD~s~nt~~L~i~~l~~eD   89 (118)
T d1lo4h1          10 DLVKPGGSLTLSCEASGFTLRTYGMSWVRQTPQMRLEWVASISYGGLLYFSDSVKGRFTISRDIVRNILTLQMSRLRSED   89 (118)
T ss_dssp             CEECTTCCEEEEEEEESSCTTTSEEEEEEECTTCCEEEEEEECTTCCEEECTTTBTTBEEEEETTTTEEEEEECSCCGGG
T ss_pred             ceECCCCCeEEEEEECCCcccCCCcccccCCCCcceeeeeecccccchhhccccceeEEEeccccceeeeeccccccCCc
Confidence            45679999999999999765  36789872   1111    1111          233331      236899999  79


Q ss_pred             CeEEEEEEEe
Q psy8771         168 SENYTCIAAS  177 (904)
Q Consensus       168 ~g~Y~c~a~n  177 (904)
                      .+.|.|....
T Consensus        90 tA~YyCAr~~   99 (118)
T d1lo4h1          90 TAIYYCARGT   99 (118)
T ss_dssp             CEEEEEEEEE
T ss_pred             ceEEEecccC
Confidence            9999996543

>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.99  E-value=0.15  Score=39.32  Aligned_cols=30  Identities=30%  Similarity=0.357  Sum_probs=26.2

Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ....|.|.+++..+.+.|+|.|.|..|...
T Consensus        61 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~   90 (100)
T d1qz1a3          61 DSSELTIRNVDKNDEAEYVCIAENKAGEQD   90 (100)
T ss_dssp             TSCEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred             CceEEEeCCCCcccCEEEEEEEEECCCEEE
Confidence            346799999999999999999999988643

>d1op3h1 b.1.1.1 (H:1-115) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Engineered (including hybrid species)

Probab=90.99  E-value=0.21  Score=39.45  Aligned_cols=62  Identities=18%  Similarity=0.337  Sum_probs=41.4

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--CC-ccc----cC-C----------CCceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--GQ-NIE----LT-P----------DDKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~~-~~~----~~-~----------~~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|.++|...  ..+.|.+  .+ +.+    +. .          ..|+.+.      .-.|.|++|  +
T Consensus        10 ~lvkpg~sl~LsC~~SG~~~~~~~~~WvRQ~PGkglEwv~~i~~~~~~~~Y~~s~kgRftiSrD~s~~t~~Lqm~sL~~e   89 (125)
T d1op3h1          10 GLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVE   89 (125)
T ss_dssp             EEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred             ceECCCCCeEEEEeECCccCcCcccCccccCCCcceeeeeecCccccccccccccccceEEeccCccceEeeeeeccCCc
Confidence            56789999999999998654  3578887  21 111    11 0          1244431      236889999  6


Q ss_pred             CCeEEEEEEE
Q psy8771         167 ESENYTCIAA  176 (904)
Q Consensus       167 d~g~Y~c~a~  176 (904)
                      |...|.|...
T Consensus        90 DTAvYYCAr~   99 (125)
T d1op3h1          90 DTAIYYCARK   99 (125)
T ss_dssp             GCEEEEEEEE
T ss_pred             cceeEeEeec
Confidence            9999999754

>d2b1hh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Engineered (including hybrid species)

Probab=90.93  E-value=0.14  Score=40.54  Aligned_cols=61  Identities=15%  Similarity=0.410  Sum_probs=41.0

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--C-Cccc----c-CC----------CCceee------cceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--G-QNIE----L-TP----------DDKLPV------GRNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~-~~~~----~-~~----------~~~~~~------~~~~l~i~~l--~  166 (904)
                      -.+.+|+++.|.|+++|...-  .+.|.+  . ++.+    + ..          ..|+.+      +.-.|.|.+|  +
T Consensus        10 ~~~kpg~sl~LsC~~SG~~~~~~~~~W~RQ~PGkglewig~i~~~~~~~~ya~s~kgR~tiSrD~s~~t~yL~~~~L~~e   89 (124)
T d2b1hh1          10 EVKKSGESLKISCQTSGYSFSDYWIGWVRQMPGKGLEWMGIFYPGDSDSRYSPSFEGQVTMSADRSTNTAHLQWSSLKPS   89 (124)
T ss_dssp             EEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTCEEEEETTTTEEEEEESSCCGG
T ss_pred             ceECCCCCEEEEEEEcCCCCcCCcCccceeCCCcceeeeeecCcccccccccccceeeEEEeecCCCcEEEEeeeccccc
Confidence            677899999999999997653  578887  2 1111    1 11          133332      1236889999  6


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        90 DTA~YYCAR   98 (124)
T d2b1hh1          90 DTALYYCAR   98 (124)
T ss_dssp             GCEEEEEEE
T ss_pred             cceEEEEee
Confidence            999999953

>d1fp5a1 b.1.1.2 (A:336-438) Immunoglobulin heavy chain epsilon constant domain 3, CH3-epsilon {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain epsilon constant domain 3, CH3-epsilon
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.76  E-value=0.27  Score=38.02  Aligned_cols=62  Identities=16%  Similarity=0.408  Sum_probs=38.1

Q ss_pred             EEecCCCeEEEEEEcc-CCC---CeEEEeeCCccccCCCCc---eeecceEEEEeee--------cCCeEEEEEEEec
Q psy8771         116 EVMLDSPLNLSCVAVG-SPM---PFVKWRKGQNIELTPDDK---LPVGRNVLTLDRV--------TESENYTCIAASV  178 (904)
Q Consensus       116 ~~~~g~~~~l~C~~~g-~p~---p~i~W~k~~~~~~~~~~~---~~~~~~~l~i~~l--------~d~g~Y~c~a~n~  178 (904)
                      .+..++.++|.|.+.| .|.   ..+.|.++++ .......   ....++.+.+...        ..+..|+|.+...
T Consensus        12 ~l~~~~~~tL~C~v~gf~P~~~~v~~~W~~~~~-~~~~~~~~~~~~~~~gt~s~~S~L~v~~~~w~~g~~~tC~V~H~   88 (103)
T d1fp5a1          12 DLFIRKSPTITCLVVDLAPSKGTVNLTWSRASG-KPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHP   88 (103)
T ss_dssp             HHHTTCCCEEEEEEEESSCCSSCCEEEEEETTC-CCCCCCEEEEEEETTTEEEEEEEEECCHHHHHTTCCEEEEEECS
T ss_pred             HHhhCCCeEEEEEEEeeECCCceEEEEEcCCCc-eecccEEcccEECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEEC
Confidence            3445788999999998 454   3678888844 3322211   1124454444332        2578899999864

>d1q9rb1 b.1.1.1 (B:1-111) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 1 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Mouse (Mus musculus), cluster 1 [TaxId: 10090]

Probab=90.76  E-value=0.36  Score=37.93  Aligned_cols=62  Identities=19%  Similarity=0.443  Sum_probs=41.5

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--CC-ccc----cCC-------------CCceeec------ceEEEEeee-
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--GQ-NIE----LTP-------------DDKLPVG------RNVLTLDRV-  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~~-~~~----~~~-------------~~~~~~~------~~~l~i~~l-  165 (904)
                      -.+.+|++++|.|.++|....  .+.|.+  .+ +.+    +..             ..|+.+.      ...|.|.+| 
T Consensus        10 ~~vkpg~sl~LsC~~SG~s~~~y~~~WvRQ~PGkglewv~~i~~~~~~~~~~Y~~s~kgRftiSrD~s~nt~~L~~~sL~   89 (122)
T d1q9rb1          10 GLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLR   89 (122)
T ss_dssp             CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred             ceECCCCCEEEEEEEcCCCCcCCccCccccCCCcceeeeeeccccccCCcchhchheeecceeeeecccceeccceeeec
Confidence            567789999999999997653  588997  21 111    110             1244331      135888999 


Q ss_pred             -cCCeEEEEEEE
Q psy8771         166 -TESENYTCIAA  176 (904)
Q Consensus       166 -~d~g~Y~c~a~  176 (904)
                       +|.+.|.|...
T Consensus        90 ~eDTAvYYCar~  101 (122)
T d1q9rb1          90 AEDSATYYCARD  101 (122)
T ss_dssp             GGGCEEEEEEEC
T ss_pred             cCcceEEEEEec
Confidence             69999999764

>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=90.72  E-value=0.14  Score=39.31  Aligned_cols=28  Identities=14%  Similarity=0.106  Sum_probs=25.4

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.|.++++.+.+.|+|.|.|..|..
T Consensus        60 ~~~L~I~~~~~~D~G~Y~C~a~N~~G~~   87 (97)
T d1biha3          60 GKRLLFKTTLPEDEGVYTCEVDNGVGKP   87 (97)
T ss_dssp             TSEEEESSCCGGGCEEEEEEECCSSSSC
T ss_pred             CCEEEEEeccccccEEEEEEEEECCCcE
Confidence            3679999999999999999999999864

>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Perlecan Ig3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.52  E-value=0.082  Score=39.83  Aligned_cols=27  Identities=19%  Similarity=0.251  Sum_probs=24.7

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..|.|.++...+.+.|+|.|.|..|..
T Consensus        54 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~   80 (89)
T d1gl4b_          54 GILTIRNVQPSDAGTYVCTGSNMFAMD   80 (89)
T ss_dssp             TEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred             eEEEEecCCcccCEEEEEEEEECCCEE
Confidence            579999999999999999999998854

>d1i1ca1 b.1.1.2 (A:239-341) Immunoglobulin heavy chain gamma constant domain 2, CH2-gamma {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 2, CH2-gamma
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.49  E-value=0.38  Score=37.13  Aligned_cols=59  Identities=15%  Similarity=0.210  Sum_probs=36.7

Q ss_pred             cCCCeEEEEEEcc-CCC---CeEEEeeCCccccCCCC---ceeecceEEEEeee--------cCCeEEEEEEEec
Q psy8771         119 LDSPLNLSCVAVG-SPM---PFVKWRKGQNIELTPDD---KLPVGRNVLTLDRV--------TESENYTCIAASV  178 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~---p~i~W~k~~~~~~~~~~---~~~~~~~~l~i~~l--------~d~g~Y~c~a~n~  178 (904)
                      .+..++|.|.+.| .|.   ..|+|.++ |..+....   .....++.+.+...        ..+..|+|.+...
T Consensus        15 ~~~t~~l~Clv~~f~p~~~~v~v~W~~~-g~~~~~~~~~~~~~~~~gtys~~S~L~v~~~~W~~g~~~tC~V~H~   88 (103)
T d1i1ca1          15 GGLTPKVTCVVVDISQNDPEVRFSWFID-DVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSG   88 (103)
T ss_dssp             SSSCCEEEEEEEEECTTCCCCEEEEEES-SCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECS
T ss_pred             cCCCcEEEEEEEeeECCCCCEEEEEEEC-CccccCCEECCcEECCCCCEEEEEEEEECHHHhcCCCEEEEEEEeC
Confidence            4677899999998 454   47899998 54443321   12224444444332        2456799999863

>d1fn4b1 b.1.1.1 (B:1-106) Immunoglobulin heavy chain variable domain, VH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.48  E-value=0.08  Score=41.47  Aligned_cols=63  Identities=21%  Similarity=0.403  Sum_probs=40.9

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--C-Cccc----cCCC----------Cceee------cceEEEEeee--cC
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--G-QNIE----LTPD----------DKLPV------GRNVLTLDRV--TE  167 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~-~~~~----~~~~----------~~~~~------~~~~l~i~~l--~d  167 (904)
                      -.+.+|++++|.|+++|...  -.+.|.+  . ++.+    +..+          .|+.+      +.-.|.|++|  +|
T Consensus        10 ~~vkPg~sl~LsC~~SG~~~~~y~~~WvRQ~PGkglEwv~~i~~~g~t~y~~~~kgR~tis~D~s~~tv~L~~~~L~~eD   89 (116)
T d1fn4b1          10 GLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDD   89 (116)
T ss_dssp             SBCCTTSEECCEEECCSSCTTSSEEEEEEEETTSCCEEEEEECSSSCEEECHHHHTTBCCEEEGGGTEEECCEESCCCCC
T ss_pred             ceECCCCCeEEEEEEeCcccccCccceeeECCCCceeeeeeccccccccccccccceEEEccccccchhhcceeccCCCC
Confidence            34568999999999999765  4688997  2 1211    1111          23332      1125888899  69


Q ss_pred             CeEEEEEEEe
Q psy8771         168 SENYTCIAAS  177 (904)
Q Consensus       168 ~g~Y~c~a~n  177 (904)
                      .+.|.|....
T Consensus        90 TAvYyCAr~~   99 (116)
T d1fn4b1          90 TGTYYCTRDL   99 (116)
T ss_dssp             CEEEEEEEEC
T ss_pred             CEEEEEEeec
Confidence            9999996543

>d1jbja1 b.1.1.4 (A:101-186) CD3 gamma chain ectodomain fragment {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: CD3 gamma chain ectodomain fragment
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.22  E-value=0.29  Score=34.99  Aligned_cols=51  Identities=25%  Similarity=0.459  Sum_probs=33.9

Q ss_pred             cCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEE
Q psy8771         119 LDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAA  176 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~  176 (904)
                      ++..|.|.|   ......|+|.++ +..+....   ....+|-|-+.  .|.|.|.|...
T Consensus        21 ~dGsV~L~C---n~~~k~i~W~kd-g~~i~~~~---~~~ktlnLG~~~~DPRGiY~C~g~   73 (86)
T d1jbja1          21 GDGSVLLTC---GLTDKTIKWLKD-GSIISPLN---ATKNTWNLGNNAKDPRGTYQCQGA   73 (86)
T ss_dssp             SSCEEEEEC---SSSCSCEEEEET-TEECCCSS---CCSSCCEEEETTSCCEEEEEEEES
T ss_pred             cCCeEEEEe---CCCCcEEEEecC-Cceecccc---cccceeecCCcccCCCcceEcCCC
Confidence            567899999   334457999999 54432210   12345777666  68999999643

>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C2 set domains
domain: CD4 C2-set domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.95  E-value=0.14  Score=37.95  Aligned_cols=28  Identities=11%  Similarity=0.025  Sum_probs=24.9

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.|.++...+.+.|+|.|.|..|..
T Consensus        44 ~~~l~i~~v~~~DsG~Y~C~a~N~~g~~   71 (84)
T d2nxyb2          44 GKTLSVSQLELQDSGTWTCTVLQNQKKV   71 (84)
T ss_dssp             SSEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             eeeeeeeecccccccEEEEEEEeCCCEE
Confidence            3568999999999999999999998864

>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Junction adhesion molecule, JAM, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.86  E-value=0.11  Score=40.67  Aligned_cols=28  Identities=11%  Similarity=0.059  Sum_probs=25.4

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++...+.+.|+|.|.|..|...
T Consensus        68 ~~L~I~~v~~~D~G~Y~C~a~n~~G~~~   95 (105)
T d1nbqa1          68 TGITFKSVTREDTGTYTCMVSEEGGNSY   95 (105)
T ss_dssp             TEEECSCCCTTSCSEEEEEEEETTSSCE
T ss_pred             ceEEEecccccceeeEEEEEEECCCCEE
Confidence            5699999999999999999999998754

>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR1 [TaxId: 9606]

Probab=89.84  E-value=0.2  Score=39.28  Aligned_cols=30  Identities=20%  Similarity=0.156  Sum_probs=26.5

Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ....+.|.++.+.+.+.|+|.|.|..|...
T Consensus        72 ~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~  101 (109)
T d2fdbp2          72 EIEVLYIRNVTFEDAGEYTCLAGNSIGISF  101 (109)
T ss_dssp             EEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred             CcEEEEECCCCHHHCeEEEEEEEECCCEEE
Confidence            346799999999999999999999999754

>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of trkB receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.75  E-value=0.17  Score=39.26  Aligned_cols=29  Identities=17%  Similarity=0.297  Sum_probs=25.9

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...|.|.+++..+.+.|+|.|.|..|...
T Consensus        61 ~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~   89 (103)
T d1wwbx_          61 HGCLQLDNPTHMNNGDYTLIAKNEYGKDE   89 (103)
T ss_dssp             EEEEEEESCCGGGCEEEEEEEECSSCEEE
T ss_pred             eEEEEECCCCHHhCceEEEEEeccCCEEE
Confidence            35799999999999999999999999753

>d1pfca_ b.1.1.2 (A:) Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=89.25  E-value=0.072  Score=42.18  Aligned_cols=60  Identities=17%  Similarity=0.324  Sum_probs=34.7

Q ss_pred             cCCCeEEEEEEccC-CC-CeEEEeeCCccccCCCCceeecceEEEEee-e----c---CCeEEEEEEEec
Q psy8771         119 LDSPLNLSCVAVGS-PM-PFVKWRKGQNIELTPDDKLPVGRNVLTLDR-V----T---ESENYTCIAASV  178 (904)
Q Consensus       119 ~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~-l----~---d~g~Y~c~a~n~  178 (904)
                      .++.++|.|.+.|. |. ..|+|.+++.............++.+.+.. |    +   .+..|+|.+...
T Consensus        26 ~~~~~tL~C~v~gf~P~~i~v~W~~~~~~~~~~~~~~~~~dgtys~~S~L~v~~~~W~~~~~ytC~V~H~   95 (111)
T d1pfca_          26 SKKKVSLTCMITGFYPADINVEWDSSEPSDYKNTPPVFDTDGSFFLYSRLKVDTDAWNNGESFTCSVMHE   95 (111)
T ss_dssp             CTTSCCEEEEEESCCSSCCEEESSSCCTTTEEEEEEECCSSCCCEEEEEECCCSSCCHHHHCCEEEEEET
T ss_pred             cCCceEEEEEEEeeECCCcEEEEeeCCCCCcEEcccEECCCCcEEEEEEEEECHHHhCCCCEEEEEEEeC
Confidence            35678999999994 54 579999883221110001112344444432 2    2   256799999864

>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3, second domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Tyrosine-protein kinase receptor tyro3, second domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.24  E-value=0.63  Score=34.26  Aligned_cols=27  Identities=15%  Similarity=-0.079  Sum_probs=21.2

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|......+.+.|+|.|.|..|..
T Consensus        49 ~~~~l~~~~~~d~G~Y~C~A~N~~G~~   75 (85)
T d1rhfa2          49 SPSVLNVTGVTQSTMFSCEAHNLKGLA   75 (85)
T ss_dssp             SSEEEEECCCSSCEEEEEEEEETTEEE
T ss_pred             cceEEecCCccccEEEEEEEEcCCCcE
Confidence            445666666778999999999999853

>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fibroblast growth factor receptor, FGFR
species: Human (Homo sapiens), FGFR2a [TaxId: 9606]

Probab=88.78  E-value=0.064  Score=41.34  Aligned_cols=28  Identities=11%  Similarity=0.135  Sum_probs=25.4

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...+.|.++...+.+.|+|.|.|..|..
T Consensus        61 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~   88 (97)
T d3dara1          61 HWSLIMESVVPSDKGNYTCVVENEYGSI   88 (97)
T ss_dssp             GTEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred             cEEEEECCCCcccCEEEEEEEEECCCEE
Confidence            4689999999999999999999998864

>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Axonin-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=88.63  E-value=0.16  Score=38.15  Aligned_cols=27  Identities=15%  Similarity=0.010  Sum_probs=24.7

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..+.|.++.+.+.+.|+|.|.|..|..
T Consensus        53 ~~L~i~~v~~~D~G~Y~C~a~N~~G~~   79 (89)
T d1cs6a4          53 GELRFSKLVLEDSGMYQCVAENKHGTV   79 (89)
T ss_dssp             TEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             eeEEEEeecccCCEEEEEEEEeCCCEE
Confidence            579999999999999999999999864

>d1nfdf1 b.1.1.1 (F:1-114) Immunoglobulin heavy chain variable domain, VH {Hamster (Cricetulus griseus) [TaxId: 10029]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Hamster (Cricetulus griseus) [TaxId: 10029]

Probab=88.57  E-value=0.24  Score=38.87  Aligned_cols=62  Identities=23%  Similarity=0.484  Sum_probs=41.4

Q ss_pred             eEEecCCCeEEEEEEccCCCC--eEEEee--CC-ccc----cC---CC----------Cceee------cceEEEEeee-
Q psy8771         115 LEVMLDSPLNLSCVAVGSPMP--FVKWRK--GQ-NIE----LT---PD----------DKLPV------GRNVLTLDRV-  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k--~~-~~~----~~---~~----------~~~~~------~~~~l~i~~l-  165 (904)
                      -.+.+|++++|.|+++|....  .+.|.+  .+ +.+    +.   .+          .|+.+      +...|.|.+| 
T Consensus        10 ~~vkPG~sl~LsC~~SG~~~~~~~~~WvRQ~PGkglEwv~~i~~~~~~~~t~Ya~s~kgR~tiSrD~s~nt~yL~~~~L~   89 (121)
T d1nfdf1          10 DLVQPGSSLKVSCAASGFTFSDFWMYWVRQAPGKGLEWVGRIKNIPNNYATEYADSVRGRFTISRDDSRNSIYLQMNRLR   89 (121)
T ss_dssp             EEECTTCEEEEEEEEESSCGGGEEEEEEEECTTSCEEEEEEECCTTTTTCEEECGGGTTTBCCEECTTTSEEEEEEESCC
T ss_pred             ceECCCCCEEEEEEEcCCCCcCCceeeceecCCccceeeeeecccccccccccchheeeeeEEccccccceeeceecccC
Confidence            677899999999999997653  478987  21 111    11   11          12222      1235899999 


Q ss_pred             -cCCeEEEEEEE
Q psy8771         166 -TESENYTCIAA  176 (904)
Q Consensus       166 -~d~g~Y~c~a~  176 (904)
                       +|.+.|.|...
T Consensus        90 ~eDTAvYYCAr~  101 (121)
T d1nfdf1          90 VDDTAIYYCTRA  101 (121)
T ss_dssp             GGGCEECEEEEE
T ss_pred             CCcceEEEEecc
Confidence             69999999654

>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Junction adhesion molecule, JAM, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.36  E-value=0.11  Score=40.25  Aligned_cols=28  Identities=11%  Similarity=0.090  Sum_probs=25.2

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ..+.|.++.+.+.+.|+|.|.|..|...
T Consensus        65 ~tL~I~~v~~~D~G~Y~C~a~n~~g~~~   92 (102)
T d1f97a1          65 SGITFSSVTRKDNGEYTCMVSEEGGQNY   92 (102)
T ss_dssp             TEEEESCCCGGGCEEEEEEEEETTSSSE
T ss_pred             CEEEEeECCccCCEEEEEEEEECCCCEE
Confidence            5699999999999999999999988753

>d3c2ah1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable domain, VH {Human (Homo sapiens), cluster 4 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Human (Homo sapiens), cluster 4 [TaxId: 9606]

Probab=88.32  E-value=0.84  Score=36.31  Aligned_cols=62  Identities=19%  Similarity=0.465  Sum_probs=41.2

Q ss_pred             eEEecCCCeEEEEEEccCCC--CeEEEee--C-Ccccc----C----C---------CCceee------cceEEEEeee-
Q psy8771         115 LEVMLDSPLNLSCVAVGSPM--PFVKWRK--G-QNIEL----T----P---------DDKLPV------GRNVLTLDRV-  165 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p~--p~i~W~k--~-~~~~~----~----~---------~~~~~~------~~~~l~i~~l-  165 (904)
                      -.+.+|++++|.|+++|...  ..+.|.+  . ++.+.    .    .         ..|+.+      +...|.|++| 
T Consensus        10 ~~vkpg~sl~LsC~~SG~s~s~~~~~WvRQ~PGkglewv~~i~~~~~~~~~~ya~s~kgR~tiS~D~s~nt~~Lq~~~L~   89 (131)
T d3c2ah1          10 GLVKPGGSLRLTCVASGFTFSDVWLNWVRQAPGKGLEWVGRIKSRTDGGTTDYAASVKGRFTISRDDSKNTLYLQMNSLK   89 (131)
T ss_dssp             CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECCGGGTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred             ceECCCCCeEEEEEECCCCCcCCcccccccCCCccceecccccccccccchhhccceeEEEEEecccccceeecceeccc
Confidence            56789999999999998765  3578887  2 11111    0    0         123433      1235889999 


Q ss_pred             -cCCeEEEEEEE
Q psy8771         166 -TESENYTCIAA  176 (904)
Q Consensus       166 -~d~g~Y~c~a~  176 (904)
                       +|.+.|.|...
T Consensus        90 ~eDTAvYYCAR~  101 (131)
T d3c2ah1          90 TEDTAVYSCTTD  101 (131)
T ss_dssp             GGGCEEEEEEEE
T ss_pred             cCCceEEEEecc
Confidence             69999999654

>d1sy6a1 b.1.1.4 (A:1-81) CD3 gamma chain ectodomain fragment {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: CD3 gamma chain ectodomain fragment
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.29  E-value=0.31  Score=34.50  Aligned_cols=50  Identities=18%  Similarity=0.309  Sum_probs=33.9

Q ss_pred             cCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEE
Q psy8771         119 LDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIA  175 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a  175 (904)
                      ....+.|.|   ......|+|.++ +..+..   ......+|-|-+.  .|.|.|.|..
T Consensus        16 ~dg~V~L~C---n~~~k~i~W~kd-g~~i~~---~~~~~ktlnLG~~~~DPRG~Y~C~~   67 (81)
T d1sy6a1          16 EDGSVLLTC---DAEAKNITWFKD-GKMIGF---LTEDKKKWNLGSNAKDPRGMYQCKG   67 (81)
T ss_dssp             SSSEEEEEE---CSCSSEEEEEET-TEEEEE---EESSCCCEEEEEGGGCCEEEEEEES
T ss_pred             cCCeEEEEe---CCCCcEEEEecC-CeEeec---ccCCcceeecCCcccCCCcceEcCC
Confidence            567899999   344568999999 443210   1113456777776  6899999965

>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Neural cell adhesion molecule (NCAM)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.24  E-value=0.58  Score=35.49  Aligned_cols=27  Identities=11%  Similarity=0.057  Sum_probs=24.7

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      ...|.|.+++..+.+.|+|.|.|..|.
T Consensus        59 ~~~L~I~~~~~~D~G~Y~C~a~N~~G~   85 (97)
T d1epfa1          59 SSTLTIYNANIDDAGIYKCVVTAEDGT   85 (97)
T ss_dssp             EEEEEECSCCGGGCEEEEEEEEETTTE
T ss_pred             ceEEEcccCchhhceEEEEEEEeCCCc
Confidence            467999999999999999999999885

>d1l6xa1 b.1.1.2 (A:237-341) Immunoglobulin heavy chain gamma constant domain 2, CH2-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 2, CH2-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.22  E-value=0.68  Score=35.76  Aligned_cols=62  Identities=16%  Similarity=0.318  Sum_probs=39.3

Q ss_pred             EecCCCeEEEEEEcc-CCC---CeEEEeeCCccccCCCC---ceeecceEEEEeee--------cCCeEEEEEEEecC
Q psy8771         117 VMLDSPLNLSCVAVG-SPM---PFVKWRKGQNIELTPDD---KLPVGRNVLTLDRV--------TESENYTCIAASVL  179 (904)
Q Consensus       117 ~~~g~~~~l~C~~~g-~p~---p~i~W~k~~~~~~~~~~---~~~~~~~~l~i~~l--------~d~g~Y~c~a~n~~  179 (904)
                      ...++.++|.|.+.| .|.   ..++|.++ +..+....   .....++.+.+...        ..+..|+|.+....
T Consensus        15 ~~~~~~~~L~C~~~gf~P~~~~v~~~W~~~-~~~~~~~~~~~~~~~~~gtys~~S~L~v~~~~W~~g~~ytC~V~H~~   91 (105)
T d1l6xa1          15 LMISRTPEVTCVVVDVSHEDPEVKFNWYVD-GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKA   91 (105)
T ss_dssp             HCTTSCCEEEEEEEEECSSSCCCEEEEEET-TEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTT
T ss_pred             hccCCceEEEEEEEEEeCCCCeEEEEEeeC-CeECCCcEECCcEECCCCcEEEEEEEEEcHHHcCCCCEEEEEEEeCC
Confidence            346789999999998 354   46789998 55443321   11234455444332        25678999998643

>d1igtb3 b.1.1.2 (B:236-361) Immunoglobulin heavy chain gamma constant domain 2, CH2-gamma {Mouse (Mus musculus), gamma2 [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 2, CH2-gamma
species: Mouse (Mus musculus), gamma2 [TaxId: 10090]

Probab=88.14  E-value=0.46  Score=37.83  Aligned_cols=60  Identities=15%  Similarity=0.278  Sum_probs=37.9

Q ss_pred             ecCCCeEEEEEEccC-CC---CeEEEeeCCccccCCCC---ceeecceEEEEeee--------cCCeEEEEEEEec
Q psy8771         118 MLDSPLNLSCVAVGS-PM---PFVKWRKGQNIELTPDD---KLPVGRNVLTLDRV--------TESENYTCIAASV  178 (904)
Q Consensus       118 ~~g~~~~l~C~~~g~-p~---p~i~W~k~~~~~~~~~~---~~~~~~~~l~i~~l--------~d~g~Y~c~a~n~  178 (904)
                      ..++.++|.|.+.|. |.   ..|+|.++ +..+....   .....++.+.+...        ..+..|+|.+...
T Consensus        30 ~~~~~~~L~C~v~gf~P~~~~v~v~W~~~-g~~~~~~~~~~~~~~~~gt~s~~S~L~v~~~eW~~g~~ytC~V~H~  104 (119)
T d1igtb3          30 MISLSPIVTCVVVDVSEDDPDVQISWFVN-NVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNK  104 (119)
T ss_dssp             CTTSCCEEEEEEEEECTTCCCCEEEEEET-TEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECT
T ss_pred             ccCCceEEEEEeecccCCCCcEEEEEeeC-CcccCCCEECccEECCCCcEEEEEEEEEeHHHhCCCCeEEEEEEEC
Confidence            457889999999983 43   57899999 54443221   12234444444322        2567899999863

>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=88.14  E-value=0.22  Score=37.79  Aligned_cols=28  Identities=11%  Similarity=-0.013  Sum_probs=25.3

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...|.|.++...+.+.|+|.|.|..|..
T Consensus        57 ~~~L~i~~v~~~D~G~Y~C~a~N~~G~~   84 (94)
T d1biha1          57 EGSLVFLRPQASDEGHYQCFAETPAGVA   84 (94)
T ss_dssp             SCCEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred             ceEEEEeccChhcCeEEEEEEEeCCCEE
Confidence            4679999999999999999999999864

>d1c5ch2 b.1.1.2 (H:114-230) Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.12  E-value=0.4  Score=36.99  Aligned_cols=62  Identities=16%  Similarity=0.297  Sum_probs=36.8

Q ss_pred             cCCCeEEEEEEccC-CC-CeEEEeeCCccccC--CCCceeecceEEEEeee-----c--CCeEEEEEEEecCcc
Q psy8771         119 LDSPLNLSCVAVGS-PM-PFVKWRKGQNIELT--PDDKLPVGRNVLTLDRV-----T--ESENYTCIAASVLGV  181 (904)
Q Consensus       119 ~g~~~~l~C~~~g~-p~-p~i~W~k~~~~~~~--~~~~~~~~~~~l~i~~l-----~--d~g~Y~c~a~n~~g~  181 (904)
                      .+..++|.|.+.|. |. ..|+|.++ +....  ........++.+.+...     +  .+..|+|.+....+.
T Consensus        19 ~~~~~tl~Cl~~~f~P~~i~v~W~~~-~~~~~~~t~~~~~~~~gtys~~S~L~v~~~~w~~~~ytC~V~H~~~~   91 (103)
T d1c5ch2          19 SGGTAALGCLVKDYFPEPVTVSWNSG-ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSN   91 (103)
T ss_dssp             ETTEEEEEEEEEEEBSSCCEEEEGGG-TBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGTCCCEEEEEEGGGT
T ss_pred             CCCeEEEEEEEEeEeCCCeEEEECcC-CCCCCEEECCCeECCCCCEEEEEEEEECccccCCCeEEEEEEeCCCC
Confidence            46789999999984 54 47999877 43211  11112224444443322     2  356799999876554

>d1b2wh1 b.1.1.1 (H:1-117) Immunoglobulin heavy chain variable domain, VH {Engineered (including hybrid species)}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: Immunoglobulin heavy chain variable domain, VH
species: Engineered (including hybrid species)

Probab=87.81  E-value=0.16  Score=39.62  Aligned_cols=61  Identities=23%  Similarity=0.481  Sum_probs=40.5

Q ss_pred             eEEecCCCeEEEEEEccCC--CCeEEEeeCC-cc------ccC-CC----------Cceeec------ceEEEEeee--c
Q psy8771         115 LEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NI------ELT-PD----------DKLPVG------RNVLTLDRV--T  166 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~------~~~-~~----------~~~~~~------~~~l~i~~l--~  166 (904)
                      -.+.+|++++|.|.++|..  .-.+.|.+-. |.      .+. .+          .|+.+.      ...|.|.+|  +
T Consensus        10 ~~vkpg~sl~LsC~~SG~s~~~y~~~WvRQ~pGkglewv~~i~~~~~~t~y~~s~kgR~tisrD~s~~t~~L~~~sL~~e   89 (117)
T d1b2wh1          10 GVVQPGRSLKLSCLASGYIFTSSWINWVKQRPGRGLEWIGRIDPSDGEVHYNQDFKDRFTISRDKSKNTLYLQMNSLRPE   89 (117)
T ss_dssp             CEECTTSCEEEEEECCHHHHTTSEECEEEECTTSCCEEEEEECTTTCCEEECHHHHTTEEEECCTTTTEEEEEECSCCGG
T ss_pred             ceECCCCCEEEEEEECCCCCcCCccccccCCCCCceeeeeccCCccccccccccceeeEEEEeccccceEEeeeccccCC
Confidence            5678999999999999864  3467888721 11      111 11          244331      236888999  6


Q ss_pred             CCeEEEEEE
Q psy8771         167 ESENYTCIA  175 (904)
Q Consensus       167 d~g~Y~c~a  175 (904)
                      |.+.|.|..
T Consensus        90 DTAvYYCAr   98 (117)
T d1b2wh1          90 DTAVYYCAR   98 (117)
T ss_dssp             GCEEEECCE
T ss_pred             cceEEEEcc
Confidence            999999954

>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Receptor-type tyrosine-protein phosphatase mu
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.68  E-value=0.58  Score=35.42  Aligned_cols=28  Identities=14%  Similarity=0.169  Sum_probs=25.2

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...|.|.++.+.+.+.|+|.|.|..|..
T Consensus        59 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~   86 (96)
T d2c9aa1          59 IASFNVVNTTKRDAGKYRCMIRTEGGVG   86 (96)
T ss_dssp             EEEEEECSCCGGGCSEEEEEEEETTEEE
T ss_pred             ceEEEECCCCHHHCeEEEEEEEeCCCeE
Confidence            4579999999999999999999998864

>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia) [TaxId: 7123]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Hemolin
species: Moth (Hyalophora cecropia) [TaxId: 7123]

Probab=87.50  E-value=0.14  Score=38.45  Aligned_cols=27  Identities=11%  Similarity=0.042  Sum_probs=24.5

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ..|.|.++...+.+.|+|.|.|..|..
T Consensus        54 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~   80 (89)
T d1biha4          54 SGLVIKGVKNGDKGYYGCRATNEHGDK   80 (89)
T ss_dssp             TEEEESSCCSTTCEEEEEEEEETTEEE
T ss_pred             eeEEECCCChhhCEEEEEEEEECCCEE
Confidence            459999999999999999999998864

>d1xiwb_ b.1.1.4 (B:) CD3 delta chain ectodomain fragment {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: CD3 delta chain ectodomain fragment
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.42  E-value=0.5  Score=32.61  Aligned_cols=47  Identities=19%  Similarity=0.415  Sum_probs=30.1

Q ss_pred             cCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771         119 LDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS  177 (904)
Q Consensus       119 ~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n  177 (904)
                      ..+.+.|.|.      -.|+|.++ +..+     ...+...|-|-+.  .|.|.|.|.+..
T Consensus         8 ~e~~V~L~Cn------~si~W~k~-~~~~-----~~~~~k~lnLG~~~~DPRG~Y~C~~~e   56 (74)
T d1xiwb_           8 LEDRVFVNCN------TSITWVEG-TVGT-----LLSDITRLDLGKRILDPRGIYRCNGTD   56 (74)
T ss_dssp             ETTEEEEECS------SCEEEEEE-CCCE-----EEGGGTEEEEEEGGGCCEEEEEEC---
T ss_pred             cCCeEEEEcc------CeeEEecC-Cccc-----ccCCccEeecCCcccCCCcceEeCCcc
Confidence            4568899993      46999998 3221     1123456777666  689999997653

>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: NT3 binding domain of trkC receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.31  E-value=0.36  Score=37.42  Aligned_cols=29  Identities=21%  Similarity=0.300  Sum_probs=25.8

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...|.|.++...+.+.|+|.|.|..|...
T Consensus        61 ~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~   89 (105)
T d1wwca_          61 EGCLLFNKPTHYNNGNYTLIAKNPLGTAN   89 (105)
T ss_dssp             EEEEEEESCCGGGCEEEEEEEEETTEEEE
T ss_pred             eEEEEEeecccccceEEEEEEEcCCCEEE
Confidence            45699999999999999999999998754

>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.16  E-value=0.92  Score=34.20  Aligned_cols=28  Identities=7%  Similarity=0.024  Sum_probs=25.1

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ...|.|.++...+.+.|+|.|.|..|..
T Consensus        55 ~~~L~I~~v~~~d~G~Y~C~a~N~~g~~   82 (96)
T d1l6za2          55 NSILRIDPIKREDAGEYQCEISNPVSVR   82 (96)
T ss_dssp             TTEEEECSCCGGGCEEEEEEEESSSCCE
T ss_pred             ceEEEEeccchhhceEEEEEEEeCCCCe
Confidence            3679999999999999999999998864

>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cervical EMMPRIN
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.07  E-value=0.27  Score=37.80  Aligned_cols=30  Identities=10%  Similarity=0.055  Sum_probs=25.3

Q ss_pred             ceeceEEEcCCC-CCCeEEEEEEEEcCCCCC
Q psy8771         250 IITTYYTVRNLS-PYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       250 ~~~~~~~i~~L~-p~~~Y~~~v~a~n~~g~s  279 (904)
                      .....|.|.++. ..+.+.|+|.|.|..|..
T Consensus        62 ~~~~~L~I~~v~~~~D~G~Y~C~A~N~~G~~   92 (101)
T d3b5ha1          62 QGRSELHIENLNMEADPGQYRCNGTSSKGSD   92 (101)
T ss_dssp             TTEEEEEECSCCTTTSSEEEEEEEEETTEEE
T ss_pred             CCEEEEEEeccccccCCEEEEEEEEECCCEE
Confidence            445689999998 578999999999999864

>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor TrkA, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: High affinity nerve growth factor receptor TrkA, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.81  E-value=0.54  Score=36.56  Aligned_cols=29  Identities=10%  Similarity=0.245  Sum_probs=25.8

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP  280 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~  280 (904)
                      ...+.|.++...+.+.|+|.|.|..|...
T Consensus        62 ~~~L~i~~~~~~D~G~Y~C~A~N~~G~~~   90 (107)
T d1he7a_          62 HGCLRLNQPTHVNNGNYTLLAANPFGQAS   90 (107)
T ss_dssp             EEEEEEESCCGGGCEEEEEEEEETTEEEE
T ss_pred             ceEEEECcccHHHCcEEEEEEEeCCCEEE
Confidence            35689999999999999999999999754

>d2fbjh2 b.1.1.2 (H:119-220) Immunoglobulin heavy chain alpha constant domain 1, CH1-alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: C1 set domains (antibody constant domain-like)
domain: Immunoglobulin heavy chain alpha constant domain 1, CH1-alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.24  E-value=1.6  Score=33.30  Aligned_cols=60  Identities=20%  Similarity=0.303  Sum_probs=35.3

Q ss_pred             cCCCeEEEEEEcc-CCCC--eEEEeeCCccccCCC--CceeecceEEEE------eee--cCCeEEEEEEEecC
Q psy8771         119 LDSPLNLSCVAVG-SPMP--FVKWRKGQNIELTPD--DKLPVGRNVLTL------DRV--TESENYTCIAASVL  179 (904)
Q Consensus       119 ~g~~~~l~C~~~g-~p~p--~i~W~k~~~~~~~~~--~~~~~~~~~l~i------~~l--~d~g~Y~c~a~n~~  179 (904)
                      .++.+.|.|.+.| .|..  .+.|.++ +..+...  ......++.+.+      ..-  ..+..|+|.+....
T Consensus        18 ~~~~v~L~Clv~gF~P~~~i~v~W~~~-~~~~~~~~~~~~~~~~gtys~~S~L~v~~~~W~~~~~ytC~V~H~s   90 (102)
T d2fbjh2          18 SSDPVIIGCLIHDYFPSGTMNVTWGKS-GKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDS   90 (102)
T ss_dssp             CCSSEEEEEEEEEEBSCCCEEEEESCC-CSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETT
T ss_pred             CCCcEEEEEEEEcccCCCcEEEEEccC-CCcCceeEeeeEecCCCCEEEEEEEEEeHHHccCCCEEEEEEEECC
Confidence            4688999999999 4653  5678887 5443211  111123333333      322  24677999997643

>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: V set domains (antibody variable domain-like)
domain: B- and T-lymphocyte attenuator CD272
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.37  E-value=1.1  Score=34.46  Aligned_cols=27  Identities=7%  Similarity=-0.102  Sum_probs=24.4

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      ...|.|.++.+.+.+.|+|.|.|..|.
T Consensus        64 ~~~L~I~~v~~~D~G~Y~C~A~N~~G~   90 (104)
T d2aw2a1          64 FFILHFEPVLPNDNGSYRCSANFQSNL   90 (104)
T ss_dssp             EEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred             EEEEEEccccHHHCCeEEEEEEcCCCe
Confidence            356999999999999999999999885

>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.15  E-value=0.79  Score=36.89  Aligned_cols=29  Identities=17%  Similarity=0.208  Sum_probs=25.9

Q ss_pred             eeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771         251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRG  279 (904)
Q Consensus       251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s  279 (904)
                      ....|.|.++...+.+.|+|.|.|..|..
T Consensus        92 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~  120 (130)
T d1gxea_          92 DRSIFTVEGAEKEDEGVYTVTVKNPVGED  120 (130)
T ss_dssp             TEEEEECSCCCTTTCEEEEEEEECSSCEE
T ss_pred             CEEEEEECcCChhcCEEEEEEEEECCCEE
Confidence            34679999999999999999999999864

>d1i1ra1 b.1.2.1 (A:2-101) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.03  E-value=5.6  Score=29.48  Aligned_cols=61  Identities=15%  Similarity=0.338  Sum_probs=43.7

Q ss_pred             eEEecCCCeEEEEEEc-------cCCCCeEEEeeCCccccCCCCcee-e--cceEEEEeeec-CCeEEEEEEEe
Q psy8771         115 LEVMLDSPLNLSCVAV-------GSPMPFVKWRKGQNIELTPDDKLP-V--GRNVLTLDRVT-ESENYTCIAAS  177 (904)
Q Consensus       115 ~~~~~g~~~~l~C~~~-------g~p~p~i~W~k~~~~~~~~~~~~~-~--~~~~l~i~~l~-d~g~Y~c~a~n  177 (904)
                      -++..|++++..|...       +.....|.|+.+ +..++.. +++ .  ...++.|.++. ....-.|-...
T Consensus        13 Pvv~lGS~~TAsCtI~~~c~~~~~~~A~~I~Wkl~-~~~~P~~-qy~~ln~T~~Svtl~~l~~~~a~L~C~~l~   84 (100)
T d1i1ra1          13 PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTN-HFTIPKE-QYTIINRTASSVTFTDIASLNIQLTCNILT   84 (100)
T ss_dssp             CEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEET-TEECCGG-GCEEEETTEEEEEECSCCCSEEEEEEEEEE
T ss_pred             CeEECCCCEEEEEEECchhcCccCCCcceEEEEEC-CEECCch-heEccCCcEEEEEEccccCCcceeEEEEee
Confidence            6778999999999997       335578999999 7777753 333 2  34579999995 44555675543

>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Cardiac myosin binding protein C, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.85  E-value=1.1  Score=34.89  Aligned_cols=31  Identities=3%  Similarity=-0.150  Sum_probs=26.9

Q ss_pred             eceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771         252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS  282 (904)
Q Consensus       252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s  282 (904)
                      ...+.|.++++.+.+.|+|.|.|..|....+
T Consensus        71 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~  101 (110)
T d2avga1          71 LFELHITDAQPAFTGGYRCEVSTKDKFDCSN  101 (110)
T ss_dssp             EEEEEEESCCTTCCEEEEEEEEETTEEEEEE
T ss_pred             EEEEEEeccCHHHCcEEEEEEEECCCeEEEE
Confidence            4579999999999999999999999976433

>d1olla1 b.1.1.4 (A:1-95) Ligand binding domain of NK receptor NKp46 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ligand binding domain of NK receptor NKp46
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.66  E-value=0.5  Score=35.73  Aligned_cols=73  Identities=8%  Similarity=0.035  Sum_probs=46.8

Q ss_pred             cCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE-e--ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771         213 TATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE-I--SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT  288 (904)
Q Consensus       213 ~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~-~--~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~  288 (904)
                      ....++|.+..+.. ...|.+...  +....... .  .......+.|.++.+.+.+.|+|+..+..+.+.+|.++.+.
T Consensus        17 ~G~~VTL~C~~~~~-~~~f~L~k~--g~~~~~~~~~~~~~~~~a~F~i~~v~~~~~G~Y~C~y~~~~~~S~~Sd~leL~   92 (95)
T d1olla1          17 KEKQVTICCQGNYG-AVEYQLHFE--GSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV   92 (95)
T ss_dssp             TTCCEEEEEECCTT-CCEEEEEET--TEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEE
T ss_pred             CCCcEEEEEecCCC-ccEEEEEEC--CCCcceeEEccCCCccEEEEEEeeeecCCCceEEEEeCCCCCccCCCCCEEEE
Confidence            45778888887643 334544422  11111111 1  12334679999999999999999998877777777776654

>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), IIb [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), IIb [TaxId: 9606]

Probab=83.09  E-value=1.8  Score=31.80  Aligned_cols=68  Identities=9%  Similarity=0.041  Sum_probs=40.8

Q ss_pred             CCeEEEEEeCC-CccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771         214 ATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT  288 (904)
Q Consensus       214 ~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~  288 (904)
                      ..+++|.+... +.+...|.  |..+  +....  .......+.|.++...+.+.|+|.|.|..|... |..+.+.
T Consensus        15 G~~v~L~C~~~~~~p~~~~~--W~k~--g~~~~--~~~~~~~l~i~~v~~~dsG~Y~C~a~n~~g~~~-S~~v~l~   83 (88)
T d2fcba2          15 GETIVLRCHSWKDKPLVKVT--FFQN--GKSKK--FSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYS-SKPVTIT   83 (88)
T ss_dssp             TCCEEEEEEEGGGCCCEEEE--EEET--TEEEE--EESSCCEEEETTCCGGGCEEEEEEEEETTEEEE-CCCEEEE
T ss_pred             CCeEEEEEEecCCCCCcEEE--EEee--ccccc--ccccccccccCccCHHHCCeEEEEEEeCCCCEE-eeeEEEE
Confidence            45677777654 33333333  3332  11111  122346799999999999999999999877532 3444443

>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), III [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Fc gamma receptor ectodomain (CD32)
species: Human (Homo sapiens), III [TaxId: 9606]

Probab=82.85  E-value=1.8  Score=31.94  Aligned_cols=59  Identities=5%  Similarity=-0.018  Sum_probs=37.5

Q ss_pred             CCeEEEEEeCC-CccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         214 ATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       214 ~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      ...++|.+... +.+...|  .|..+  +....  .......+.|.++...+.+.|+|.|.|..|.
T Consensus        17 G~~v~L~C~~~~~~p~~~~--~W~kn--g~~~~--~~~~~~~l~I~~v~~~dsG~Y~C~a~n~~~~   76 (89)
T d1fnla2          17 EDPIHLRCHSWKNTALHKV--TYLQN--GKDRK--YFHHNSDFHIPKATLKDSGSYFCRGLVGSKN   76 (89)
T ss_dssp             TCCEEEEEEECTTCCCEEE--EEEET--TEEEE--EEEECCCEEESSCCGGGCEEEEEEEEETTEE
T ss_pred             CCeEEEEEEecCCCCCcEE--EEEEc--ccccc--eeccccccEECccceeccceEEEEEEeCCCC
Confidence            45677777654 3333333  33333  21111  1223457899999999999999999998764

>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor receptor TrkA, different domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: High affinity nerve growth factor receptor TrkA, different domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.78  E-value=0.096  Score=39.77  Aligned_cols=31  Identities=19%  Similarity=0.200  Sum_probs=26.3

Q ss_pred             ceeceEEEcCCCCCCeE-EEEEEEEcCCCCCC
Q psy8771         250 IITTYYTVRNLSPYTEY-EFYIIAVNNLGRGP  280 (904)
Q Consensus       250 ~~~~~~~i~~L~p~~~Y-~~~v~a~n~~g~s~  280 (904)
                      .....+.|.++...+.+ .|+|.|.|..|...
T Consensus        53 ~~~~~L~i~~~~~~d~G~~Y~C~a~N~~G~~~   84 (92)
T d2ifga1          53 LPSLGLTLANVTSDLNRKNVTCWAENDVGRAE   84 (92)
T ss_dssp             SSEEEEEEESCCSTTTTCCEEECCEETTEECC
T ss_pred             ccceeEEEccccccccceEEEEEEEcCCCEEE
Confidence            33467999999999998 69999999999754

>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Semaphorin 4d Ig-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.30  E-value=0.64  Score=34.86  Aligned_cols=26  Identities=12%  Similarity=0.048  Sum_probs=23.8

Q ss_pred             ceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771         253 TYYTVRNLSPYTEYEFYIIAVNNLGR  278 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~  278 (904)
                      ..+.|.++.+.+.+.|+|.|.|..|.
T Consensus        50 ~~L~I~~v~~~DsG~Y~C~A~n~~g~   75 (92)
T d1olza1          50 KNLLIFNLSEGDSGVYQCLSEERVKN   75 (92)
T ss_dssp             TCEEECSCCGGGCEEEEEEEEEECSS
T ss_pred             eEEEECCCCHHHCcEEEEEEEEcCCC
Confidence            56999999999999999999998775

>d1ucta2 b.1.1.4 (A:101-196) Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Ig alpha Fc receptor, FCARI (CD89)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.21  E-value=2.7  Score=31.48  Aligned_cols=74  Identities=8%  Similarity=0.030  Sum_probs=46.5

Q ss_pred             cCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC---CCCCCCCeEEe
Q psy8771         213 TATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG---RGPPSSPAVIT  288 (904)
Q Consensus       213 ~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g---~s~~s~~~~~~  288 (904)
                      ....++|.+..+......|.+...  +.....+.........+.|.++.+.+.+.|+|+......   .|.+|.++.+.
T Consensus        18 ~G~~VTL~C~~~~~~~~~f~L~k~--g~~~~~~~~~~~~~a~F~l~~v~~~~~G~Y~C~y~~~~~p~~~S~~Sd~leL~   94 (96)
T d1ucta2          18 PGENISLTCSSAHIPFDRFSLAKE--GELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELV   94 (96)
T ss_dssp             TTCCCEEEEECSSSCCSEEEEEET--TCSSCCSEEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEE
T ss_pred             CCCeEEEEEeCCCCCceEEEEEEC--CcccceEEcCCCcccEEEEeccccccCcEEEEEEEcCCCCCCccCCCCCEEEE
Confidence            346778888765434455666443  222233223334457899999999999999998875532   35666666553

>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: IgE high affinity receptor alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.26  E-value=1.4  Score=32.65  Aligned_cols=69  Identities=12%  Similarity=-0.033  Sum_probs=41.1

Q ss_pred             CCeEEEEEeCCCc-cceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEec
Q psy8771         214 ATSVRLDWTYPSE-TLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT  289 (904)
Q Consensus       214 ~~sv~l~W~~~~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t  289 (904)
                      ...++|++..... +..  .+.|..++...    ........+.|.++...+.+.|+|+|.|..|.. .|..+.+..
T Consensus        15 G~~v~L~C~~~~~~~~~--~~~w~k~g~~~----~~~~~~~~l~i~~~~~~dsG~Y~C~a~n~~~~~-~S~~v~i~V   84 (89)
T d1f2qa2          15 GQPLFLRCHGWRNWDVY--KVIYYKDGEAL----KYWYENHNISITNATVEDSGTYYCTGKVWQLDY-ESEPLNITV   84 (89)
T ss_dssp             TSCEEEEEEEGGGCCEE--EEEEEETTEEC----CSCCCSSEEEESSCCGGGCEEEEEEEEETTEEE-ECCCEEEEE
T ss_pred             CCEEEEEEEecCCCCCe--EEEEEEeeecc----ccccccceEEEeeeeeecCcEEEEEEEeCCCCe-EeeeEEEEE
Confidence            4567777765422 232  33333332111    111234679999999999999999999987643 345554443

>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Type-1 interleukin-1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.26  E-value=3.2  Score=31.65  Aligned_cols=27  Identities=19%  Similarity=0.153  Sum_probs=24.3

Q ss_pred             ceEEEcCCCCCCeE-EEEEEEEcCCCCC
Q psy8771         253 TYYTVRNLSPYTEY-EFYIIAVNNLGRG  279 (904)
Q Consensus       253 ~~~~i~~L~p~~~Y-~~~v~a~n~~g~s  279 (904)
                      ..|.|.++++.+.+ .|+|.|.|..|..
T Consensus        70 ~~L~I~~v~~~D~g~~Y~C~A~N~~G~~   97 (107)
T d1iray3          70 TVLNISEIESRFYKHPFTCFAKNTHGID   97 (107)
T ss_dssp             EEEEESSCCGGGGSSCEEEEEECSSCEE
T ss_pred             EEEEEeecchHHCCcEEEEEEEeCCCeE
Confidence            57999999999998 5999999999964

>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Interleukin-6 receptor alpha chain, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.12  E-value=1.8  Score=32.25  Aligned_cols=65  Identities=6%  Similarity=-0.039  Sum_probs=37.3

Q ss_pred             ecCCeEEEEEeCCCccceEEEEEEEeCCCCC-CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771         212 VTATSVRLDWTYPSETLLYYVIQYKPKAANT-PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG  277 (904)
Q Consensus       212 ~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g  277 (904)
                      ....+++|.+...+.+.. ..|.|...+... ............+.|.+++..+.+.|+|.|.|..+
T Consensus        19 ~~G~~v~L~C~~~g~~~~-~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~   84 (93)
T d1n26a1          19 LPGDSVTLTCPGVEPEDN-ATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPA   84 (93)
T ss_dssp             CTTCCEEEECTTSCTTCC-SEEEEEEECSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEESSSSCS
T ss_pred             eCCCcEEEEEEeecCCCC-ceEEEEEccccccceeeEEecCCCEEEECCCChhcCEEEEEEECCccc
Confidence            335678888876643321 123333322111 11111222336799999999999999999976543

>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Immunoglobulin
family: I set domains
domain: Myosin-binding protein C, slow-type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.08  E-value=1  Score=33.43  Aligned_cols=29  Identities=3%  Similarity=0.010  Sum_probs=23.8

Q ss_pred             eecceeceEEEcCCCCCCeEEEEEEEEcC
Q psy8771         247 ISGIITTYYTVRNLSPYTEYEFYIIAVNN  275 (904)
Q Consensus       247 ~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~  275 (904)
                      ........|.|.++.+.+.+.|+|.|.|.
T Consensus        51 ~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~   79 (90)
T d1x44a1          51 RVEGKKHILIIEGATKADAAEYSVMTTGG   79 (90)
T ss_dssp             EEETTEEEEEEEEECTTTCSEEEEEETTE
T ss_pred             EEeCCccEEEECccccccCEEEEEEEecc
Confidence            33344578999999999999999999774