Psyllid ID: psy8774

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------
Protein Sequence
MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQERRLQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKKRWMDCVNQDLGEKNLTGHEAHNRAAWKRLTRNADPI
Secondary Structure (PSIPRED)
ccccccccEEEEEEEccccccccccEEEEEEEEccccEEEEEEcccccEEEEcccccccEEEEEEEEEcccccccccccEEEccccccccccccEEEEEccccEEEEEEEccccccccccccEEEEEEEEccccccEEEEcccccEEEEcccccccEEEEEEEEEcccccccccccEEEEccccccccccccEEEEEEccEEEEEEEcccccccEEEEEEEEEEEccccccccccccccccccccccEEEEEEcccccccccccccccccccEEEEcccccccEEEEEEEEEcccccccccccEEEEEccccccccEEEEEccccEEEEEEccccccccEEEEEEEEEEEEEEEEEEcEEEEEEEcccccccEEEEEEEEEcccccccccccEEEEEEcccccccccccccccEEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccEccccEEEEEEcccccccccEEEEEEEEEccccccEEEEEcccccEEEEEccccccEEEEEEEEEEcccccccccEEEEEcccccccccccEEEEEccccEEEEEEcccccccccccEEEEEEEEEEccccccEEEEcccccEEEEEccccccEEEEEEEEEEccccccccccEEEEcccccccccccEEEEEEcccEEEEEEcccccccccEEEEEEEEEEccccccccEEEcccccccccccccEEEEcccccccccEEEEEccccEEEEEEccccccEEEEEEEEEEccccccccccEEEEcccccccccEEEEEccccEEEEEEccccccccEEEEEEEEEccccEEEEccccEEEEEEccccccEEEEEEEEEEccccccccccEEEEcccccccccccccEEccccEEEEEEEEcccc
Coil and Loop (DISEMBL)
mlkeepevTIELVwsqptqtygEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGqnhigygqetvryyttpegpptgppanishhfqtpdvvcitwdpplrthrngqivLYNVkfhkkidannvihrntTQTKAVFSNLEEGIEYSAEVQAItkagpgpwspklslmTARDMVRAPLGVKALAtsdqsvevwwkpvpagrgkilGYQIFYTMTAVedldewsqksipltessniARIFYTMTAVEdldewsqksvpltesaeltslEKFTEYAVAVAARTVNglgrlsgkvtvkvkpedvplslrahdvsthsmtlswsppiklnpvkyKEVSEKIQERRLQKYGQYRYFETRDESYIGKRVERMEvrgrkgrgrpkkrwmdcvnqdlgeknltgheahNRAAWKRLTRNADPI
Flexible Loop (DISEMBL)
MLKEEPEVTIElvwsqptqtygeILGYRVKYGVREHTLkenlvnsknmsFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIdannvihrnttqTKAVFSNLEEGIEYSAEVQAItkagpgpwsPKLSLMTARDMVRAPLGVKAlatsdqsvevwwkpvpagrgkILGYQIFYTMTAVEDLDEWSQKSipltessniARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARtvnglgrlsgkvtvkvkpedvplslrahdvsthsmtlswsppiklnpvKYKEVSEKIQerrlqkygqyryfetrdesyigkrvermevrgrkgrgrpkkrwmdcVNQDLgeknltgheahnraawkrltrnadpi
Low Complexity Region (SEG)
MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYttpegpptgppANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQERRLQKYGQYRYFETRDESYIGKRVERMEVrgrkgrgrpkkrWMDCVNQDLGEKNLTGHEAHNRAAWKRLTRNADPI
Disordered region (IsUnstruct)
*******VTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTT***********ISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQERRLQKYGQYRYFETRDESYIGK*******************WMDCV******************************
Disordered Region (DISOPRED)
MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHI********************PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN***HRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLD*W*******TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQERRLQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKKRWMDC********************WKR********
Disordered Region (DISEMBL)
********TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQERRLQKYGQYRYFETRDESYIGKRVERMEV**********KRWMDCVNQDLGEKNLTGHEAHNRAAWKRLTRNADPI
Disordered Region (DISPRO)
MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQERRLQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKKRWMDCVNQDLGEKNLTGHEAHNRAAWKRLTRNADPI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQERRLQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKKRWMDCVNQDLGEKNLTGHEAHNRAAWKRLTRNADPI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	427	2.2.26 [Sep-21-2011]
P16621	2029	Tyrosine-protein phosphat	yes	N/A	0.733	0.154	0.581	1e-110
P10586	1907	Receptor-type tyrosine-pr	yes	N/A	0.510	0.114	0.309	7e-22
Q64487	1912	Receptor-type tyrosine-pr	yes	N/A	0.475	0.106	0.301	3e-20
A4IFW2	1909	Receptor-type tyrosine-pr	no	N/A	0.501	0.112	0.303	3e-20
P23468	1912	Receptor-type tyrosine-pr	no	N/A	0.496	0.110	0.305	3e-20
A2A8L5	1898	Receptor-type tyrosine-pr	yes	N/A	0.510	0.114	0.309	4e-20
Q64604	1898	Receptor-type tyrosine-pr	no	N/A	0.510	0.114	0.300	1e-19
A7MBJ4	1898	Receptor-type tyrosine-pr	no	N/A	0.512	0.115	0.301	2e-19
P0C5E4	2300	Phosphatidylinositol phos	no	N/A	0.681	0.126	0.245	1e-18
Q90610	1443	Neogenin (Fragment) OS=Ga	no	N/A	0.683	0.202	0.285	3e-17

>sp|P16621|LAR_DROME Tyrosine-protein phosphatase Lar OS=Drosophila melanogaster GN=Lar PE=1 SV=2

 Score =  399 bits (1024), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/344 (58%), Positives = 247/344 (71%), Gaps = 31/344 (9%)

Query: 1    MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSF-LITNLERGV 59
            +++ EP V+IEL W +P QTYGE+ GYR+++GV++  LKE +++   M+     NLERGV
Sbjct: 821  IMEREPIVSIELEWERPAQTYGELRGYRLRWGVKDQALKEEMLSGPQMTKKRFDNLERGV 880

Query: 60   EYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG 119
            EYEFR+AG NHIG GQETV+ + TPEG P GPP+NI+  FQTPDV+C+TWDPP R HRNG
Sbjct: 881  EYEFRVAGSNHIGIGQETVKIFQTPEGTPGGPPSNITIRFQTPDVLCVTWDPPTREHRNG 940

Query: 120  QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
             I  Y+V+FHKKID      RN T  KAVF+NLEE  EY   V+A TK G GP+S KL +
Sbjct: 941  IITRYDVQFHKKIDHGLGSERNMTLRKAVFTNLEENTEYIFRVRAYTKQGAGPFSDKLIV 1000

Query: 180  MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             T RDM RAP+ ++A ATS+Q+ E+WW+PV   RGK+LGY+IFYTMTAVEDLD+W  K+ 
Sbjct: 1001 ETERDMGRAPMSLQAEATSEQTAEIWWEPV-TSRGKLLGYKIFYTMTAVEDLDDWQTKT- 1058

Query: 240  PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR 299
                                        V LTESA+L +LEKF +YAVA+AAR  NGLGR
Sbjct: 1059 ----------------------------VGLTESADLVNLEKFAQYAVAIAARFKNGLGR 1090

Query: 300  LSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYK 343
            LS KVTV++KPEDVPL+LRAHDVSTHSMTLSWSPPI+L PV YK
Sbjct: 1091 LSEKVTVRIKPEDVPLNLRAHDVSTHSMTLSWSPPIRLTPVNYK 1134

Possible cell adhesion receptor. It possesses an intrinsic protein tyrosine phosphatase activity (PTPase). It controls motor axon guidance.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8

>sp|P10586|PTPRF_HUMAN Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens GN=PTPRF PE=1 SV=2

 Score =  105 bits (262), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 5/223 (2%)

Query: 9    TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
            T  L W  P +  GE+LGYR++Y  R    + N ++    +  F +T L +G  Y FR+A
Sbjct: 835  TALLQWHPPKELPGELLGYRLQY-CRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLA 893

Query: 67   GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
             +N  G G+E  +   TPE  P+G P N+     T     + WDPP+   RNG+I+ Y V
Sbjct: 894  AKNRAGLGEEFEKEIRTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTV 953

Query: 127  KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMV 186
             F + I++   +   TT T+   + L+    Y  +V+A T  G GP SP +   T     
Sbjct: 954  VF-RDINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMPVEQ 1012

Query: 187  RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVE 229
                  +  A    SV + W+ VP      + ++I Y   +VE
Sbjct: 1013 VFAKNFRVAAAMKTSVLLSWE-VPDSYKSAVPFKILYNGQSVE 1054

The first PTPase domain has enzymatic activity, while the second one seems to affect the substrate specificity of the first one.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q64487|PTPRD_MOUSE Receptor-type tyrosine-protein phosphatase delta OS=Mus musculus GN=Ptprd PE=1 SV=3

 Score =  100 bits (248), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 16/219 (7%)

Query: 14   WSQPTQTYGEILGYRVKYGVREHTLKENL-VNSKNMSFLITNLERGVEYEFRIAGQNHIG 72
            W  P  T+G + GYR+K+G ++      L  + K   F  T++ +G  Y FR++ +N +G
Sbjct: 843  WHPPVDTFGPLQGYRLKFGRKDMEPLTTLEFSEKEDHFTATDIHKGASYVFRLSARNKVG 902

Query: 73   YGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI 132
            +G+E V+  + PE  PTG P N+     T   V ++W PP+   RNG I  Y +  ++ I
Sbjct: 903  FGEEMVKEISVPEEIPTGFPQNLHSEGTTSTSVQLSWQPPVLAERNGVITKYTL-LYRDI 961

Query: 133  DA------NNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT-ARDM 185
            +       + ++  +T+ T    + L+    Y  +V+A T  GPGP+SP +   T   D 
Sbjct: 962  NVPLLPMEHLIVPADTSMT---LTGLKSDTTYDVKVRAHTSKGPGPYSPSVQFRTLPVDQ 1018

Query: 186  VRAP-LGVKALATSDQSVEVWWKPVPAGRGKILGYQIFY 223
            V A    VKA+  +  SV + W+ +P      + ++I Y
Sbjct: 1019 VFAKNFHVKAVMKT--SVLLSWE-IPENYNSAMPFKILY 1054

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|A4IFW2|PTPRF_DANRE Receptor-type tyrosine-protein phosphatase F OS=Danio rerio GN=ptprf PE=2 SV=1

 Score =  100 bits (248), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 13/227 (5%)

Query: 9    TIELVWSQPTQTYGEILGYRVKYG-VREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
            T  + W  P    GE++GYR++Y  + E   +    +  +    +T+L +G  Y F ++ 
Sbjct: 835  TALIQWQPPKDMVGELMGYRLRYKRLEEENYEIREFSRTDDHHTVTDLHKGATYSFHLSA 894

Query: 68   QNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVK 127
            +N  G G+E V+   TPE  P+G P N+     T     +TW+PP  + RNG+I+ Y V 
Sbjct: 895  RNRAGLGEEYVKDIGTPEDVPSGFPLNLQVVGLTTSTTRLTWEPPALSERNGRIIHYIVV 954

Query: 128  FHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVR 187
            +       N  +R T+ T+     L     Y   VQA T  G GP SP +    +R M  
Sbjct: 955  YRDINSKQNSTNR-TSDTQMTIQGLRPDTTYDIRVQAFTSKGGGPISPSIQ---SRTMST 1010

Query: 188  AP-----LGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVE 229
            +P      GVKA+  +  SV + W+ VP      + ++I Y   +VE
Sbjct: 1011 SPAFATSFGVKAVMKT--SVLLTWE-VPENYKSQVPFKILYNQQSVE 1054

The first PTPase domain has enzymatic activity, while the second one seems to affect the substrate specificity of the first one.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|P23468|PTPRD_HUMAN Receptor-type tyrosine-protein phosphatase delta OS=Homo sapiens GN=PTPRD PE=1 SV=2

 Score =  100 bits (248), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 17/229 (7%)

Query: 14   WSQPTQTYGEILGYRVKYGVREHTLKENL-VNSKNMSFLITNLERGVEYEFRIAGQNHIG 72
            W  P  T+G + GYR+K+G ++      L  + K   F  T++ +G  Y FR++ +N +G
Sbjct: 843  WHPPVDTFGPLQGYRLKFGRKDMEPLTTLEFSEKEDHFTATDIHKGASYVFRLSARNKVG 902

Query: 73   YGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI 132
            +G+E V+  + PE  PTG P N+     T   V ++W PP+   RNG I  Y +  ++ I
Sbjct: 903  FGEEMVKEISIPEEVPTGFPQNLHSEGTTSTSVQLSWQPPVLAERNGIITKYTL-LYRDI 961

Query: 133  DA------NNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT-ARDM 185
            +         ++  +TT T    + L+    Y  +V+A T  GPGP+SP +   T   D 
Sbjct: 962  NIPLLPMEQLIVPADTTMT---LTGLKPDTTYDVKVRAHTSKGPGPYSPSVQFRTLPVDQ 1018

Query: 186  VRAP-LGVKALATSDQSVEVWWKPVPAGRGKILGYQIFY-TMTAVEDLD 232
            V A    VKA+  +  SV + W+ +P      + ++I Y     VE++D
Sbjct: 1019 VFAKNFHVKAVMKT--SVLLSWE-IPENYNSAMPFKILYDDGKMVEEVD 1064

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|A2A8L5|PTPRF_MOUSE Receptor-type tyrosine-protein phosphatase F OS=Mus musculus GN=Ptprf PE=1 SV=1

 Score = 99.8 bits (247), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 5/223 (2%)

Query: 9    TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
            T  L W  P +  GE+LGYR++Y  R    + N ++    +  F +T L +G  Y FR+A
Sbjct: 826  TALLQWHPPKELPGELLGYRLQYR-RADEARPNTIDFGKDDQHFTVTGLHKGATYVFRLA 884

Query: 67   GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
             +N  G G+E  +  TTPE  P+G P N+     T     +TWDPP+   RNG I  Y V
Sbjct: 885  AKNRAGPGEEFEKEITTPEDVPSGFPQNLRVTGLTTSTTELTWDPPVLAERNGHITNYTV 944

Query: 127  KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMV 186
              ++ I++   +   T  T      L+    Y  +V+A T  G GP SP +   T     
Sbjct: 945  -VYRDINSQLELQNVTNDTHLTLLGLKPDTTYDIKVRAHTSKGAGPLSPSIQSRTMPVEQ 1003

Query: 187  RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVE 229
                  +  A    SV + W+ VP      + ++I Y   +VE
Sbjct: 1004 VFAKNFRVAAAMKTSVLLSWE-VPDSYKSAVPFKILYNGQSVE 1045

The first PTPase domain has enzymatic activity, while the second one seems to affect the substrate specificity of the first one.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q64604|PTPRF_RAT Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus GN=Ptprf PE=2 SV=1

 Score = 97.8 bits (242), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 5/223 (2%)

Query: 9    TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
            T  L W  P +  GE+LGYR++Y  R    + N ++    +  F +T L +G  Y FR+A
Sbjct: 826  TALLQWHPPKELPGELLGYRLQYR-RADEARPNTIDFGKDDQHFTVTGLHKGATYIFRLA 884

Query: 67   GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
             +N  G G+E  +  TTPE  P+G P N+     T     + WDPP+   RNG+I  Y V
Sbjct: 885  AKNRAGPGEEFEKEITTPEDAPSGFPQNLRVTGLTTSTTELAWDPPVLAERNGRITNYTV 944

Query: 127  KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMV 186
              ++ I++ + +   T         L+    Y  +V+A T  G GP SP +   T     
Sbjct: 945  -VYRDINSQHELQNVTGDVHLTLLGLKPDTTYDIKVRAHTSKGAGPLSPSIQSRTMPMEQ 1003

Query: 187  RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVE 229
                  +  A    SV + W+ VP      + ++I Y   +VE
Sbjct: 1004 VFAKNFRVAAAMKTSVLLSWE-VPDSYKSAVPFKILYNGQSVE 1045

The first PTPase domain has enzymatic activity, while the second one seems to affect the substrate specificity of the first one.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|A7MBJ4|PTPRF_BOVIN Receptor-type tyrosine-protein phosphatase F OS=Bos taurus GN=PTPRF PE=2 SV=1

 Score = 97.4 bits (241), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 3/222 (1%)

Query: 9    TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKN-MSFLITNLERGVEYEFRIAG 67
            T  L W  P +  GE+LGYR++Y   +      +   K+   F +T L +G  Y FR+  
Sbjct: 826  TALLQWHPPKELPGELLGYRLQYRRADEARPSTIDFGKDDQHFTVTGLHKGATYIFRLTA 885

Query: 68   QNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVK 127
            +N  G G+E  +  TTPE  P+G P N+     T     + WDPP+   RNG+I  Y V 
Sbjct: 886  KNRAGLGEEFEKEITTPEDVPSGFPQNLRVIGLTTSTTELIWDPPVLAERNGRITNYTV- 944

Query: 128  FHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVR 187
             ++ I++   +   T  T    S L+    Y  +V+A T  G GP SP +   T      
Sbjct: 945  VYRDINSQQELQNVTADTHLTLSGLKPDTTYDIKVRARTSKGAGPLSPSIQSRTMPVEQV 1004

Query: 188  APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVE 229
                 +  A    SV + W+ VP      + ++I Y   +VE
Sbjct: 1005 FAKNFRVEAAMKTSVLLSWE-VPDSYKSAVPFRILYNGQSVE 1045

The first PTPase domain has enzymatic activity, while the second one seems to affect the substrate specificity of the first one.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|P0C5E4|PTPRQ_MOUSE Phosphatidylinositol phosphatase PTPRQ OS=Mus musculus GN=Ptprq PE=1 SV=1

 Score = 94.4 bits (233), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 146/338 (43%), Gaps = 47/338 (13%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           +I L W  P    G+I  Y + Y +   T +   + + + SFLIT L++   Y+ R+A  
Sbjct: 584 SILLYWDPPEYPNGKITHYTI-YAMELDTNRAFQMTTVDNSFLITGLKKYTRYKMRVAAS 642

Query: 69  NHIG---YGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYN 125
            H+G     +E   +  TPE  P   P ++     +P  + +TW PP +   NG I+ Y 
Sbjct: 643 THVGESSLSEENDLFVRTPEDEPESSPQDVKVTDVSPSELSLTWSPPEKP--NGIIIAYE 700

Query: 126 VKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDM 185
           V F++  DA  +  +NT+ T    S+L+    Y+  +Q+ T+ G G  S  L  +   + 
Sbjct: 701 V-FYQNADA--LFVKNTSTTNITLSDLKPYTLYNISIQSYTRLGHGNQSSSLLSVRTSET 757

Query: 186 V--RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTE 243
           V   AP  +     S + +E+++ P  +  G I  Y I+   +   +       S+ LT 
Sbjct: 758 VPDSAPENITYKNISSEEIEIFFLPPRSPNGIIQKYTIYLKRSNSHEARTIETTSLTLT- 816

Query: 244 SSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK 303
                                           +  L+K+T Y + V+A T+ G G  S  
Sbjct: 817 --------------------------------IGGLKKYTHYVIEVSASTLKGEGVRSMP 844

Query: 304 VTVKVK---PEDVPLSLRAHDVSTHSMTLSWSPPIKLN 338
           +++  +   P+  P +     +S  ++ LSW PP++ N
Sbjct: 845 ISILTEEDAPDSPPQNFSVKQLSGVTVMLSWQPPLEPN 882

Phosphatidylinositol phosphatase required for auditory function. May act by regulating the level of phosphatidylinositol 4,5-bisphosphate (PIP2) level in the basal region of hair bundles. Can dephosphorylate a broad range of phosphatidylinositol phosphates, including phosphatidylinositol 3,4,5-trisphosphate and most phosphatidylinositol monophosphates and diphosphates. Phosphate can be hydrolyzed from the D3 and D5 positions in the inositol ring. Has low tyrosine-protein phosphatase activity; however, the relevance of such activity in vivo is unclear. Plays an important role in adipogenesis of mesenchymal stem cells (MSCs). Regulates the phosphorylation state of AKT1 by suppressing the phosphatidylinositol 3,4,5-trisphosphate (PIP3) level in MSCs and preadipocyte cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q90610|NEO1_CHICK Neogenin (Fragment) OS=Gallus gallus PE=2 SV=1

 Score = 89.7 bits (221), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 152/347 (43%), Gaps = 55/347 (15%)

Query: 10  IELVWSQP-TQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
           I L W  P +   G+ L Y + Y   G+    + EN         +I NL     Y FR+
Sbjct: 441 IRLTWRTPVSDPQGDNLTYSIFYTKEGINRERV-ENTSRPGETQVMIQNLMPETVYVFRV 499

Query: 66  AGQNHIGYGQET--VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
             QN  G+G+ +  ++  T PE    GP  NI  +  +P  V +TW+ PL    NG+I  
Sbjct: 500 VAQNKHGHGESSAPLKVATQPEVQLPGPAPNIRAYAGSPTSVTVTWETPLSG--NGEIQN 557

Query: 124 YNVKFHKK-IDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
           Y + + +K  D+   +  +        + L++  EYS  V A  K GPG  +  + + T 
Sbjct: 558 YKLYYMEKGQDSEQDV--DVAGLSYTITGLKKYTEYSFRVVAYNKHGPGVSTQDVVVRTL 615

Query: 183 RDM-VRAPLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTMTAVEDLDEWSQKSI 239
            D+   AP  +   A + +S+ + W+P PAG   G+I GY+I Y         + S+KS 
Sbjct: 616 SDVPSAAPQNLTLEARNSKSIMLHWQPPPAGTHSGQITGYKIRYR--------KVSRKSD 667

Query: 240 PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR 299
            +TES    ++F  +                        LE+ TEY   +AA TVNG G 
Sbjct: 668 -VTESVGGTQLFQLIEG----------------------LERGTEYNFRIAAMTVNGTGP 704

Query: 300 LSGKVTVKVKPED--------VPLSLRAHDVSTHSMTLSWSPPIKLN 338
            +  V+ +    D        VP SL    + T S+ +SW+PP   N
Sbjct: 705 ATDWVSAETFESDLDESRVPEVPSSLHVRPLVT-SIVVSWTPPENQN 750

May be involved as a regulatory protein in the transition of undifferentiated proliferating cells to their differentiated state. May also function as a cell adhesion molecule in a broad spectrum of embryonic and adult tissues.

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	427
242003488	2014	Receptor-type tyrosine-protein phosphata	0.751	0.159	0.605	1e-119
350427923	2025	PREDICTED: tyrosine-protein phosphatase	0.749	0.158	0.594	1e-114
340724097	1926	PREDICTED: tyrosine-protein phosphatase	0.749	0.166	0.592	1e-114
270004034	2156	hypothetical protein TcasGA2_TC003342 [T	0.751	0.148	0.613	1e-113
189235110	2016	PREDICTED: similar to receptor tyrosine	0.751	0.159	0.613	1e-113
383854788	2040	PREDICTED: tyrosine-protein phosphatase	0.749	0.156	0.594	1e-112
380021984	1774	PREDICTED: tyrosine-protein phosphatase	0.749	0.180	0.592	1e-112
157109352	2007	receptor tyrosine phosphatase type r2a [	0.751	0.159	0.585	1e-111
307201903	1374	Tyrosine-protein phosphatase Lar [Harpeg	0.749	0.232	0.577	1e-111
195385007	2025	GJ13567 [Drosophila virilis] gi|19414765	0.733	0.154	0.590	1e-111

>gi|242003488|ref|XP_002422752.1| Receptor-type tyrosine-protein phosphatase F precursor, putative [Pediculus humanus corporis] gi|212505585|gb|EEB10014.1| Receptor-type tyrosine-protein phosphatase F precursor, putative [Pediculus humanus corporis]

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/352 (60%), Positives = 268/352 (76%), Gaps = 31/352 (8%)

Query: 1    MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGV 59
            ++++EP V+IEL W++PTQTYGE++GY++K+G+++  LKE ++  S   S    +LERG+
Sbjct: 808  VMEKEPTVSIELEWTKPTQTYGELIGYKLKHGIKDQPLKEEIIKGSGKTSRSFVDLERGL 867

Query: 60   EYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG 119
            EYEFRIAGQN +GYGQETV+Y+ TPEGPP+GPP NIS+ FQTPDVVCITW PP R  RNG
Sbjct: 868  EYEFRIAGQNAVGYGQETVKYFLTPEGPPSGPPLNISYRFQTPDVVCITWVPPSRDQRNG 927

Query: 120  QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
            QI  Y+++F KK+D + V  RNTTQTKAVFSNLEE  EY  +++A T  GPGP+S K+S+
Sbjct: 928  QITHYDIQFFKKMDHSTVPERNTTQTKAVFSNLEENTEYVFQIRAFTSQGPGPFSEKISI 987

Query: 180  MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             T RDM+RAP+ V+A+ATS++SVEVWW+ VPA R K++GYQIFYTMTAVEDLDEW QKS 
Sbjct: 988  KTERDMMRAPMNVEAVATSEESVEVWWEAVPA-RSKVIGYQIFYTMTAVEDLDEWQQKS- 1045

Query: 240  PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR 299
                                        V LTESA+L +LEKF +YA+AVAART  GLGR
Sbjct: 1046 ----------------------------VSLTESADLLNLEKFAQYAIAVAARTKVGLGR 1077

Query: 300  LSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQE 351
            LS KVTVK+KPEDVPL+LRAHDVSTHSMTLSWSPPI+LNP+ YK   + ++E
Sbjct: 1078 LSEKVTVKIKPEDVPLNLRAHDVSTHSMTLSWSPPIRLNPINYKISFDAVKE 1129

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350427923|ref|XP_003494927.1| PREDICTED: tyrosine-protein phosphatase Lar-like, partial [Bombus impatiens]

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/353 (59%), Positives = 263/353 (74%), Gaps = 33/353 (9%)

Query: 1    MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLE-RG 58
            +L ++P+V +EL WSQPTQTYG++LGYR++YG++  TLKE  +  ++  ++ IT+LE RG
Sbjct: 818  LLSKDPDV-VELEWSQPTQTYGDVLGYRIRYGIKNQTLKEEYIPGNRQHTYKITDLEERG 876

Query: 59   VEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRN 118
            V+YEFR+AGQN IG+GQETVR++ +PEG PTGPP N+S+ FQTPD VC+TWDPPLR HRN
Sbjct: 877  VDYEFRVAGQNAIGFGQETVRFWYSPEGEPTGPPTNLSYFFQTPDTVCVTWDPPLRQHRN 936

Query: 119  GQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS 178
            GQI  Y+V+F+KK D +  I+RNTT+T+AVF+NLEE  EY   V+A T  G GP+S K++
Sbjct: 937  GQITGYDVQFNKKNDHSTTINRNTTKTRAVFTNLEENTEYVFHVRAHTSRGSGPYSEKIT 996

Query: 179  LMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKS 238
            ++T +D+ RAP+ VKA+ATSD SVEVWW+PVP  RGKILGYQIFYT TAVEDLDEW QK 
Sbjct: 997  IITEKDIGRAPMSVKAVATSDTSVEVWWEPVP-NRGKILGYQIFYTTTAVEDLDEWKQK- 1054

Query: 239  IPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
                                        +V LTESAEL +LEKFT+YA+ VAAR   GLG
Sbjct: 1055 ----------------------------TVGLTESAELVNLEKFTQYAITVAARYKTGLG 1086

Query: 299  RLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQE 351
            RLS KVTVKVKPEDVPL LR  D STHSMTLSW PPIKLNP+ YK   + ++E
Sbjct: 1087 RLSEKVTVKVKPEDVPLDLRGPDSSTHSMTLSWKPPIKLNPMNYKVSFDAVKE 1139

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724097|ref|XP_003400421.1| PREDICTED: tyrosine-protein phosphatase Lar-like, partial [Bombus terrestris]

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/353 (59%), Positives = 263/353 (74%), Gaps = 33/353 (9%)

Query: 1    MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLE-RG 58
            +L ++P+V +EL WSQPTQTYG++LGYR++YG++  TLKE  +  ++  ++ IT+LE RG
Sbjct: 719  LLSKDPDV-VELEWSQPTQTYGDVLGYRIRYGIKNQTLKEEYIPGNRQHTYKITDLEERG 777

Query: 59   VEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRN 118
            V+YEFR+AGQN IG+GQETVR++ +PEG PTGPP N+S+ FQTPD VC+TWDPPLR HRN
Sbjct: 778  VDYEFRVAGQNAIGFGQETVRFWYSPEGEPTGPPTNLSYFFQTPDTVCVTWDPPLRQHRN 837

Query: 119  GQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS 178
            GQI  Y+V+F+KK D +  I+RNTT+T+AVF+NLEE  EY   V+A T  G GP+S K++
Sbjct: 838  GQITGYDVQFNKKNDHSTTINRNTTKTRAVFTNLEENTEYVFHVRAHTSRGSGPYSEKIT 897

Query: 179  LMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKS 238
            ++T +D+ RAP+ VKA+ATSD SVEVWW+PVP  RGKILGYQIFYT TAVEDLDEW QK 
Sbjct: 898  IITEKDIGRAPMSVKAVATSDTSVEVWWEPVP-NRGKILGYQIFYTTTAVEDLDEWKQK- 955

Query: 239  IPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
                                        +V LTESAEL +LEKFT+YA+ VAAR   GLG
Sbjct: 956  ----------------------------TVGLTESAELVNLEKFTQYAITVAARYKTGLG 987

Query: 299  RLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQE 351
            RLS KVTVKVKPEDVPL LR  D STH+MTLSW PPIKLNP+ YK   + ++E
Sbjct: 988  RLSEKVTVKVKPEDVPLDLRGPDSSTHTMTLSWKPPIKLNPMNYKVSFDAVKE 1040

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270004034|gb|EFA00482.1| hypothetical protein TcasGA2_TC003342 [Tribolium castaneum]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/352 (61%), Positives = 267/352 (75%), Gaps = 31/352 (8%)

Query: 1    MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKE-NLVNSKNMSFLITNLERGV 59
            +++ EP VTIEL W++P+QTYGE+ GYR+++GV++  LK+ NL  +   S+ I+NLERGV
Sbjct: 947  IIEREPTVTIELEWTRPSQTYGELKGYRLRFGVKDQKLKDVNLKGTHTNSYRISNLERGV 1006

Query: 60   EYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG 119
            EYEFR+AGQNHIG GQE ++Y  TPEGPPTGPP+NI+H FQTPDVVC+TWDPP R HRNG
Sbjct: 1007 EYEFRVAGQNHIGIGQEAIKYMHTPEGPPTGPPSNITHRFQTPDVVCVTWDPPAREHRNG 1066

Query: 120  QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
            QI+ Y+++FHKK D +N+I RN + TKAVF+NLEE  EY   V+A T  G GP S K ++
Sbjct: 1067 QIIKYDIQFHKKSDHSNIITRNVSTTKAVFTNLEENTEYVFHVKAYTNQGAGPNSEKFTI 1126

Query: 180  MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             T RD+ RAPL VKA+ATSD SVEVWW+PVP+ R KI+GYQIFYTMTAVEDLDEW QKS 
Sbjct: 1127 QTDRDIGRAPLSVKAVATSDSSVEVWWEPVPS-RAKIIGYQIFYTMTAVEDLDEWQQKS- 1184

Query: 240  PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR 299
                                        V +TESA+L +LEK+ +YA+AVAAR  NGLGR
Sbjct: 1185 ----------------------------VDVTESADLVNLEKYAQYAIAVAARFKNGLGR 1216

Query: 300  LSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQE 351
            LS KVTVKVKPEDVPL+LRAH+VSTHSMTL+WSPPI+LNP+KYK   + I+E
Sbjct: 1217 LSEKVTVKVKPEDVPLNLRAHEVSTHSMTLTWSPPIRLNPIKYKISFDAIKE 1268

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235110|ref|XP_971078.2| PREDICTED: similar to receptor tyrosine phosphatase type r2a [Tribolium castaneum]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/352 (61%), Positives = 267/352 (75%), Gaps = 31/352 (8%)

Query: 1    MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKE-NLVNSKNMSFLITNLERGV 59
            +++ EP VTIEL W++P+QTYGE+ GYR+++GV++  LK+ NL  +   S+ I+NLERGV
Sbjct: 807  IIEREPTVTIELEWTRPSQTYGELKGYRLRFGVKDQKLKDVNLKGTHTNSYRISNLERGV 866

Query: 60   EYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG 119
            EYEFR+AGQNHIG GQE ++Y  TPEGPPTGPP+NI+H FQTPDVVC+TWDPP R HRNG
Sbjct: 867  EYEFRVAGQNHIGIGQEAIKYMHTPEGPPTGPPSNITHRFQTPDVVCVTWDPPAREHRNG 926

Query: 120  QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
            QI+ Y+++FHKK D +N+I RN + TKAVF+NLEE  EY   V+A T  G GP S K ++
Sbjct: 927  QIIKYDIQFHKKSDHSNIITRNVSTTKAVFTNLEENTEYVFHVKAYTNQGAGPNSEKFTI 986

Query: 180  MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             T RD+ RAPL VKA+ATSD SVEVWW+PVP+ R KI+GYQIFYTMTAVEDLDEW QKS 
Sbjct: 987  QTDRDIGRAPLSVKAVATSDSSVEVWWEPVPS-RAKIIGYQIFYTMTAVEDLDEWQQKS- 1044

Query: 240  PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR 299
                                        V +TESA+L +LEK+ +YA+AVAAR  NGLGR
Sbjct: 1045 ----------------------------VDVTESADLVNLEKYAQYAIAVAARFKNGLGR 1076

Query: 300  LSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQE 351
            LS KVTVKVKPEDVPL+LRAH+VSTHSMTL+WSPPI+LNP+KYK   + I+E
Sbjct: 1077 LSEKVTVKVKPEDVPLNLRAHEVSTHSMTLTWSPPIRLNPIKYKISFDAIKE 1128

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854788|ref|XP_003702902.1| PREDICTED: tyrosine-protein phosphatase Lar-like [Megachile rotundata]

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/353 (59%), Positives = 260/353 (73%), Gaps = 33/353 (9%)

Query: 1    MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNM-SFLITNLE-RG 58
            +L  EP V +EL W QPTQTYG++LGYR++YG++  TLKE  +    + ++ IT+LE RG
Sbjct: 832  VLSREP-VELELDWEQPTQTYGDLLGYRIRYGIKNQTLKEEFIEGTRVHTYKITDLEERG 890

Query: 59   VEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRN 118
            V+YEFR+AGQN IG+GQETVRY+ +PEG PTGPP N+S+ FQTPD VC+TWD PLR HRN
Sbjct: 891  VDYEFRVAGQNAIGFGQETVRYWFSPEGEPTGPPTNLSYTFQTPDTVCVTWDKPLRQHRN 950

Query: 119  GQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS 178
            GQI+ Y+V+F+KK D +  I RNTT+T+AVF+NLEE  EY   V+A T  G GP+S K++
Sbjct: 951  GQIIGYDVQFNKKNDHSTTIDRNTTKTRAVFTNLEENTEYVFHVRAHTSRGSGPYSEKIT 1010

Query: 179  LMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKS 238
            ++T +D+ RAPL VKA+ATS+ SVEVWW+PVP  RGKILGYQIFYT TAVEDLDEW QKS
Sbjct: 1011 IITEKDIGRAPLSVKAVATSETSVEVWWEPVP-NRGKILGYQIFYTTTAVEDLDEWKQKS 1069

Query: 239  IPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
                                         V LTESA+L +LEKFT+YA+ VAAR    LG
Sbjct: 1070 -----------------------------VGLTESADLVNLEKFTQYAITVAARYKTTLG 1100

Query: 299  RLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQE 351
            RLS KVTVKVKPEDVPL+LRA D STHSMTLSW+PPIKLNP+ YK   + ++E
Sbjct: 1101 RLSEKVTVKVKPEDVPLNLRAPDSSTHSMTLSWTPPIKLNPMNYKVSFDAVKE 1153

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021984|ref|XP_003694835.1| PREDICTED: tyrosine-protein phosphatase Lar-like [Apis florea]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/353 (59%), Positives = 259/353 (73%), Gaps = 33/353 (9%)

Query: 1   MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNM-SFLITNL-ERG 58
           +L  +PE+ +EL WSQPTQTYG++LGYR++YG++  TLKE  +   +  ++ IT+L ERG
Sbjct: 566 VLSRDPEM-LELDWSQPTQTYGDLLGYRIRYGIKNQTLKEEFIQDIHQHTYKITDLGERG 624

Query: 59  VEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRN 118
           V+YEFR+AGQN IG+GQETVRY+ +PEG PTG P N+S+ FQTPD VC+TWD PLR HRN
Sbjct: 625 VDYEFRVAGQNAIGFGQETVRYWFSPEGLPTGAPTNLSYFFQTPDTVCVTWDMPLREHRN 684

Query: 119 GQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS 178
           GQI+ Y+V+F+KK D +  I+RNTT+T+AVF+NLEE  EY   V A T  G GP S K++
Sbjct: 685 GQIIGYDVQFNKKNDHSTTINRNTTKTRAVFTNLEENTEYVFHVIARTSRGSGPISEKIT 744

Query: 179 LMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKS 238
           ++T +DM RAP+ VKA+ATSD SVEVWW+PVP  RGKILGYQIFYT TAVEDLDEW QK+
Sbjct: 745 IVTEKDMGRAPMSVKAVATSDTSVEVWWEPVP-NRGKILGYQIFYTTTAVEDLDEWKQKT 803

Query: 239 IPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
           I                              LTESA+L +LEKFT+YA+ VAAR   GLG
Sbjct: 804 I-----------------------------GLTESADLVNLEKFTQYAITVAARYKTGLG 834

Query: 299 RLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQE 351
           RLS KVTVKVKPEDVPL LRA D STHSMTLSW PPI+LNP+ YK   + ++E
Sbjct: 835 RLSEKVTVKVKPEDVPLDLRAPDSSTHSMTLSWKPPIRLNPMNYKVSFDAVKE 887

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157109352|ref|XP_001650632.1| receptor tyrosine phosphatase type r2a [Aedes aegypti] gi|108879038|gb|EAT43263.1| AAEL005284-PA [Aedes aegypti]

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/352 (58%), Positives = 254/352 (72%), Gaps = 31/352 (8%)

Query: 1    MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKEN-LVNSKNMSFLITNLERGV 59
            +L+ +P V+IEL W +P QTYGE+ G+RVK+GVREH L+E  ++N   ++  I +LERGV
Sbjct: 800  VLERDPTVSIELEWERPKQTYGELRGFRVKWGVREHPLQEEPILNENTLTKRINDLERGV 859

Query: 60   EYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG 119
            EYEFR+AG NHIG GQET++YY TPEG PTGPP +I   FQTPDVVCITW+PP R HRNG
Sbjct: 860  EYEFRVAGMNHIGIGQETIKYYQTPEGTPTGPPTDIVVRFQTPDVVCITWEPPTREHRNG 919

Query: 120  QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
            QI  Y+V+FHKKID      RNTT  KAVF+NLEE  EY   ++A TK G GP+S K  +
Sbjct: 920  QITRYDVQFHKKIDHGLGTDRNTTMRKAVFTNLEESTEYIVRIRAYTKQGAGPYSEKKII 979

Query: 180  MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             T RDM RAPL V+A+ATS+Q+VEVWW+PVP+ RGK++GY+IFYTMTAVEDLDEW     
Sbjct: 980  STERDMGRAPLSVQAVATSEQTVEVWWEPVPS-RGKLVGYKIFYTMTAVEDLDEW----- 1033

Query: 240  PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR 299
                                      K V +TESA+L +LEKF +YA+A+AA    G GR
Sbjct: 1034 ------------------------QTKVVGVTESADLLNLEKFAQYAIAIAALYKTGPGR 1069

Query: 300  LSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQE 351
            LS KVTVKVKPEDVPL+LRAHDVSTHSMTL+W+PPI+LNP  YK   + ++E
Sbjct: 1070 LSEKVTVKVKPEDVPLNLRAHDVSTHSMTLNWAPPIRLNPTNYKISFDAVKE 1121

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307201903|gb|EFN81532.1| Tyrosine-protein phosphatase Lar [Harpegnathos saltator]

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 204/353 (57%), Positives = 262/353 (74%), Gaps = 33/353 (9%)

Query: 1   MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNM-SFLITNL-ERG 58
           +L   P+V +EL W+ PTQTYG +LGYR++YG++  TLKE  +++ N  ++ IT+L E+G
Sbjct: 89  VLSRGPDV-LELEWAAPTQTYGNLLGYRIRYGIKNQTLKEEFIDNMNQHTYKITDLGEQG 147

Query: 59  VEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRN 118
           V+YEFR+AG+N+IGYGQETVRY+ +PEG PTGPP N+S+ FQTPD VC+TWD P R HRN
Sbjct: 148 VDYEFRVAGKNNIGYGQETVRYWFSPEGEPTGPPTNLSYFFQTPDTVCVTWDKPQRQHRN 207

Query: 119 GQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS 178
           GQI+ Y+V+F+KK D +  I RNTT+T+AVF++LEE  EY   V+A T  G GP+S K++
Sbjct: 208 GQIIGYDVQFNKKNDHSTTIDRNTTKTRAVFTDLEENTEYVFHVRAHTSQGSGPYSEKIT 267

Query: 179 LMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKS 238
           ++T +D+ RAP+ V+A+ATSD SVEVWW+PVP  RGKI+GYQIFYT TAVEDLDEW QKS
Sbjct: 268 IITEKDIGRAPMSVRAVATSDSSVEVWWEPVP-NRGKIVGYQIFYTTTAVEDLDEWKQKS 326

Query: 239 IPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
                                        V LTESA+L +LEKFT+YA+ VAAR   GLG
Sbjct: 327 -----------------------------VGLTESADLINLEKFTQYAITVAARYKTGLG 357

Query: 299 RLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQE 351
           RLS KVTVKVKPEDVPL+LRA D STHSMTLSW+PPI+L P+KYK   + ++E
Sbjct: 358 RLSEKVTVKVKPEDVPLNLRAPDSSTHSMTLSWTPPIRLTPIKYKVSFDAVKE 410

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195385007|ref|XP_002051200.1| GJ13567 [Drosophila virilis] gi|194147657|gb|EDW63355.1| GJ13567 [Drosophila virilis]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/344 (59%), Positives = 251/344 (72%), Gaps = 31/344 (9%)

Query: 1    MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSF-LITNLERGV 59
            +++ EP V+IEL W +P QTYGE+ GYR+++GV++  LKE +++   M+     +LERGV
Sbjct: 818  IMEREPIVSIELEWERPAQTYGELRGYRLRWGVKDQALKEEMLSGPQMTKKRFNDLERGV 877

Query: 60   EYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG 119
            EYEFR+AG NHIG GQETV+ + TPEG P GPP+NI+  FQTPDVVC+TWDPP R HRNG
Sbjct: 878  EYEFRVAGSNHIGIGQETVKIFQTPEGTPGGPPSNITVRFQTPDVVCVTWDPPTRDHRNG 937

Query: 120  QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
             I  Y+V+FHKKID      RN T  KAVF+NLEE  EY   V+A TK G GP+S KL +
Sbjct: 938  LITRYDVQFHKKIDHGLGSERNMTLRKAVFTNLEENTEYIFRVRAYTKQGAGPFSEKLII 997

Query: 180  MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             T RDM RAP+ V+A+ATS+Q+ E+WW+PVP+ RGK+LGY+IFYTMTAVEDLD+W  K+ 
Sbjct: 998  ETERDMGRAPMSVQAVATSEQTAEIWWEPVPS-RGKLLGYKIFYTMTAVEDLDDWQTKT- 1055

Query: 240  PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR 299
                                        V LTESA+L +LEKF +YAVA+AAR  NGLGR
Sbjct: 1056 ----------------------------VGLTESADLVNLEKFAQYAVAIAARFKNGLGR 1087

Query: 300  LSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYK 343
            LS KVTV++KPEDVPL+LRAHDVSTHSMTLSWSPPI+LNPV YK
Sbjct: 1088 LSEKVTVRIKPEDVPLNLRAHDVSTHSMTLSWSPPIRLNPVNYK 1131

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	427
FB|FBgn0000464	2029	Lar "Leukocyte-antigen-related	0.583	0.122	0.541	7.2e-70
UNIPROTKB|F2Z3B8	1266	PTPRF "Receptor-type tyrosine-	0.529	0.178	0.286	1.6e-17
UNIPROTKB|H0Y7Z9	1332	PTPRF "Receptor-type tyrosine-	0.529	0.169	0.286	1.7e-17
UNIPROTKB|H0Y6Z7	1553	PTPRF "Receptor-type tyrosine-	0.529	0.145	0.286	2.1e-17
ZFIN|ZDB-GENE-021031-1	1428	neo1 "neogenin 1" [Danio rerio	0.484	0.144	0.284	2.4e-17
UNIPROTKB|P10586	1907	PTPRF "Receptor-type tyrosine-	0.529	0.118	0.286	2.7e-17
UNIPROTKB|E2RE80	1897	PTPRF "Uncharacterized protein	0.529	0.119	0.290	3.5e-17
UNIPROTKB|E2RE81	1906	PTPRF "Uncharacterized protein	0.529	0.118	0.290	3.5e-17
UNIPROTKB|F1N897	1767	PTPRF "Uncharacterized protein	0.529	0.127	0.286	1.6e-16
UNIPROTKB|B7ZKN0	1450	NEO1 "NEO1 protein" [Homo sapi	0.601	0.177	0.270	5.4e-15

FB|FBgn0000464 Lar "Leukocyte-antigen-related-like" [Drosophila melanogaster (taxid:7227)]

 Score = 722 (259.2 bits), Expect = 7.2e-70, P = 7.2e-70
 Identities = 136/251 (54%), Positives = 181/251 (72%)

Query:     1 MLKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFL-ITNLERGV 59
             +++ EP V+IEL W +P QTYGE+ GYR+++GV++  LKE +++   M+     NLERGV
Sbjct:   821 IMEREPIVSIELEWERPAQTYGELRGYRLRWGVKDQALKEEMLSGPQMTKKRFDNLERGV 880

Query:    60 EYEFRIAGQNHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNG 119
             EYEFR+AG NHIG GQETV+ +           +NI+  FQTPDV+C+TWDPP R HRNG
Sbjct:   881 EYEFRVAGSNHIGIGQETVKIFQTPEGTPGGPPSNITIRFQTPDVLCVTWDPPTREHRNG 940

Query:   120 QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
              I  Y+V+FHKKID      RN T  KAVF+NLEE  EY   V+A TK G GP+S KL +
Sbjct:   941 IITRYDVQFHKKIDHGLGSERNMTLRKAVFTNLEENTEYIFRVRAYTKQGAGPFSDKLIV 1000

Query:   180 MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
              T RDM RAP+ ++A ATS+Q+ E+WW+PV + RGK+LGY+IFYTMTAVEDLD+W  K++
Sbjct:  1001 ETERDMGRAPMSLQAEATSEQTAEIWWEPVTS-RGKLLGYKIFYTMTAVEDLDDWQTKTV 1059

Query:   240 PLTESSNIARI 250
              LTES+++  +
Sbjct:  1060 GLTESADLVNL 1070

GO:0006470 "protein dephosphorylation" evidence=NAS;IDA

GO:0005001 "transmembrane receptor protein tyrosine phosphatase activity" evidence=ISS

GO:0004725 "protein tyrosine phosphatase activity" evidence=NAS;IDA

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0007411 "axon guidance" evidence=IMP;TAS

GO:0008045 "motor neuron axon guidance" evidence=IGI;NAS;IMP;TAS

GO:0016021 "integral to membrane" evidence=NAS

GO:0001700 "embryonic development via the syncytial blastoderm" evidence=NAS

GO:0048477 "oogenesis" evidence=IMP

GO:0007399 "nervous system development" evidence=IMP

GO:0007155 "cell adhesion" evidence=IMP

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0045467 "R7 cell development" evidence=IMP

GO:0008594 "photoreceptor cell morphogenesis" evidence=IMP

GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0030424 "axon" evidence=IDA

GO:0048841 "regulation of axon extension involved in axon guidance" evidence=IMP

GO:0048675 "axon extension" evidence=IMP

GO:0051124 "synaptic growth at neuromuscular junction" evidence=IMP

GO:0007412 "axon target recognition" evidence=IMP

GO:0032093 "SAM domain binding" evidence=IPI

GO:0005925 "focal adhesion" evidence=IDA

UNIPROTKB|F2Z3B8 PTPRF "Receptor-type tyrosine-protein phosphatase F" [Homo sapiens (taxid:9606)]

 Score = 245 (91.3 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 67/234 (28%), Positives = 107/234 (45%)

Query:     9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
             T  L W  P +  GE+LGYR++Y  R    + N ++    +  F +T L +G  Y FR+A
Sbjct:   183 TALLQWHPPKELPGELLGYRLQY-CRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLA 241

Query:    67 GQNHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
              +N  G G+E  +              N+     T     + WDPP+   RNG+I+ Y V
Sbjct:   242 AKNRAGLGEEFEKEIRTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTV 301

Query:   127 KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR-DM 185
              F + I++   +   TT T+   + L+    Y  +V+A T  G GP SP +   T   + 
Sbjct:   302 VF-RDINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMPVEQ 360

Query:   186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             V A    +  A    SV + W+ VP      + ++I Y   +VE +D  S + +
Sbjct:   361 VFAK-NFRVAAAMKTSVLLSWE-VPDSYKSAVPFKILYNGQSVE-VDGHSMRKL 411

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|H0Y7Z9 PTPRF "Receptor-type tyrosine-protein phosphatase F" [Homo sapiens (taxid:9606)]

 Score = 245 (91.3 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 67/234 (28%), Positives = 107/234 (45%)

Query:     9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
             T  L W  P +  GE+LGYR++Y  R    + N ++    +  F +T L +G  Y FR+A
Sbjct:   249 TALLQWHPPKELPGELLGYRLQY-CRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLA 307

Query:    67 GQNHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
              +N  G G+E  +              N+     T     + WDPP+   RNG+I+ Y V
Sbjct:   308 AKNRAGLGEEFEKEIRTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTV 367

Query:   127 KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR-DM 185
              F + I++   +   TT T+   + L+    Y  +V+A T  G GP SP +   T   + 
Sbjct:   368 VF-RDINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMPVEQ 426

Query:   186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             V A    +  A    SV + W+ VP      + ++I Y   +VE +D  S + +
Sbjct:   427 VFAK-NFRVAAAMKTSVLLSWE-VPDSYKSAVPFKILYNGQSVE-VDGHSMRKL 477

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|H0Y6Z7 PTPRF "Receptor-type tyrosine-protein phosphatase F" [Homo sapiens (taxid:9606)]

 Score = 245 (91.3 bits), Expect = 2.1e-17, P = 2.1e-17
 Identities = 67/234 (28%), Positives = 107/234 (45%)

Query:     9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
             T  L W  P +  GE+LGYR++Y  R    + N ++    +  F +T L +G  Y FR+A
Sbjct:   481 TALLQWHPPKELPGELLGYRLQY-CRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLA 539

Query:    67 GQNHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
              +N  G G+E  +              N+     T     + WDPP+   RNG+I+ Y V
Sbjct:   540 AKNRAGLGEEFEKEIRTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTV 599

Query:   127 KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR-DM 185
              F + I++   +   TT T+   + L+    Y  +V+A T  G GP SP +   T   + 
Sbjct:   600 VF-RDINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMPVEQ 658

Query:   186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             V A    +  A    SV + W+ VP      + ++I Y   +VE +D  S + +
Sbjct:   659 VFAK-NFRVAAAMKTSVLLSWE-VPDSYKSAVPFKILYNGQSVE-VDGHSMRKL 709

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

ZFIN|ZDB-GENE-021031-1 neo1 "neogenin 1" [Danio rerio (taxid:7955)]

 Score = 210 (79.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
 Identities = 64/225 (28%), Positives = 108/225 (48%)

Query:    10 IELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKN---MSFLITNLERGVEYEFRIA 66
             ++L W  P + +G+ + Y V Y + E T +E +VN+     M   I NL    +Y FR+ 
Sbjct:   436 LKLTWRLPAEPHGDDVTYSVYYSL-EGTNRERIVNTSRPGEMQVTIQNLMPDTKYAFRVV 494

Query:    67 GQNHIGYGQETV--RYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLY 124
               N  G G+ +V  +              N+     +P  V ++WD PL    NG+I  Y
Sbjct:   495 AHNKNGPGESSVPLKVETQPEVQVPGPAPNLHAVVMSPSTVSLSWDVPLIG--NGEIQNY 552

Query:   125 NVKFHKK-IDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
              + + +K +D+   +  NT       + L++  EYS  + A  K GPG  +  +S+ T  
Sbjct:   553 KIYYMEKGMDSEQDLDVNTLSY--TMTGLKKFTEYSFRLVAYNKHGPGVSTEDISVRTYS 610

Query:   184 DMVRAP---LGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFY 223
             D+  +P   + V+ L  + +S+ + W+P PA    G+I GY+I Y
Sbjct:   611 DVPSSPPQNMTVEVL--NSKSLMIRWQPPPADAQNGEITGYKIRY 653

GO:0005021 "vascular endothelial growth factor-activated receptor activity" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0048010 "vascular endothelial growth factor receptor signaling pathway" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0001841 "neural tube formation" evidence=IMP

GO:0001756 "somitogenesis" evidence=IMP

GO:0007399 "nervous system development" evidence=IMP

UNIPROTKB|P10586 PTPRF "Receptor-type tyrosine-protein phosphatase F" [Homo sapiens (taxid:9606)]

 Score = 245 (91.3 bits), Expect = 2.7e-17, P = 2.7e-17
 Identities = 67/234 (28%), Positives = 107/234 (45%)

Query:     9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
             T  L W  P +  GE+LGYR++Y  R    + N ++    +  F +T L +G  Y FR+A
Sbjct:   835 TALLQWHPPKELPGELLGYRLQY-CRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLA 893

Query:    67 GQNHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
              +N  G G+E  +              N+     T     + WDPP+   RNG+I+ Y V
Sbjct:   894 AKNRAGLGEEFEKEIRTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTV 953

Query:   127 KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR-DM 185
              F + I++   +   TT T+   + L+    Y  +V+A T  G GP SP +   T   + 
Sbjct:   954 VF-RDINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMPVEQ 1012

Query:   186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             V A    +  A    SV + W+ VP      + ++I Y   +VE +D  S + +
Sbjct:  1013 VFAK-NFRVAAAMKTSVLLSWE-VPDSYKSAVPFKILYNGQSVE-VDGHSMRKL 1063

GO:0007155 "cell adhesion" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IDA

GO:0005001 "transmembrane receptor protein tyrosine phosphatase activity" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007185 "transmembrane receptor protein tyrosine phosphatase signaling pathway" evidence=TAS

GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=IDA;TAS

UNIPROTKB|E2RE80 PTPRF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 244 (91.0 bits), Expect = 3.5e-17, P = 3.5e-17
 Identities = 68/234 (29%), Positives = 108/234 (46%)

Query:     9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
             T  L W  P +  GE+LGYR++Y  R    K N+++    +  F +T L +G  Y FR+A
Sbjct:   826 TALLQWHPPKELPGELLGYRLQYH-RADEAKPNILDFGKDDQHFTVTGLHKGATYIFRLA 884

Query:    67 GQNHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
              +N  G G+E  +              N+     T     +TWDPP+   RNG+I  Y+V
Sbjct:   885 AKNRAGPGEEFEKEITTPEDAPSGFPQNLRVIGLTTSTTELTWDPPVLAERNGRITNYSV 944

Query:   127 KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA-RDM 185
              + + I++   +   T  T  + S L+    Y  +V+A T  G GP SP +   T   + 
Sbjct:   945 VY-RDINSQQELQNVTADTHLMLSGLKPDTTYDIKVRARTSKGAGPLSPSIQSRTMPMEQ 1003

Query:   186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             V A    +  A    SV + W+ VP      + ++I Y   +VE +D  S + +
Sbjct:  1004 VFAK-NFRVAAAMKTSVLLSWE-VPDSYKSAVPFKILYNGQSVE-VDGHSMRKL 1054

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|E2RE81 PTPRF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 244 (91.0 bits), Expect = 3.5e-17, P = 3.5e-17
 Identities = 68/234 (29%), Positives = 108/234 (46%)

Query:     9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
             T  L W  P +  GE+LGYR++Y  R    K N+++    +  F +T L +G  Y FR+A
Sbjct:   835 TALLQWHPPKELPGELLGYRLQYH-RADEAKPNILDFGKDDQHFTVTGLHKGATYIFRLA 893

Query:    67 GQNHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
              +N  G G+E  +              N+     T     +TWDPP+   RNG+I  Y+V
Sbjct:   894 AKNRAGPGEEFEKEITTPEDAPSGFPQNLRVIGLTTSTTELTWDPPVLAERNGRITNYSV 953

Query:   127 KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA-RDM 185
              + + I++   +   T  T  + S L+    Y  +V+A T  G GP SP +   T   + 
Sbjct:   954 VY-RDINSQQELQNVTADTHLMLSGLKPDTTYDIKVRARTSKGAGPLSPSIQSRTMPMEQ 1012

Query:   186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             V A    +  A    SV + W+ VP      + ++I Y   +VE +D  S + +
Sbjct:  1013 VFAK-NFRVAAAMKTSVLLSWE-VPDSYKSAVPFKILYNGQSVE-VDGHSMRKL 1063

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|F1N897 PTPRF "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 238 (88.8 bits), Expect = 1.6e-16, P = 1.6e-16
 Identities = 67/234 (28%), Positives = 108/234 (46%)

Query:     9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
             T  + W  P +  GE+LGYR++Y  R    K N ++   ++  + +TNL +G  Y FR++
Sbjct:   698 TALIQWHPPKEMVGELLGYRLQYR-RLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFRLS 756

Query:    67 GQNHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
              +N  G G+E  +              N+     T     + WDPP+   RNG+IV Y V
Sbjct:   757 AKNRAGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTV 816

Query:   127 KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR-DM 185
              + + I++   +   T  T    +NL+    Y  +V+A T  G GP SP +   T   + 
Sbjct:   817 VY-RDINSQQDLVNITKDTSITLTNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMPVEQ 875

Query:   186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
             V A    +  A    SV + W+ VP      + ++I Y   +VE +D  S K +
Sbjct:   876 VFAK-NFRVNAVMKTSVLLSWE-VPDSYKSAVPFKILYNSQSVE-VDGHSMKKL 926

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|B7ZKN0 NEO1 "NEO1 protein" [Homo sapiens (taxid:9606)]

 Score = 215 (80.7 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
 Identities = 76/281 (27%), Positives = 121/281 (43%)

Query:     9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
             +I + W  P    GEI  Y++ Y + + T KE  V+  + S+ I  L++  EY FR+   
Sbjct:   554 SITVTWETPVSGNGEIQNYKLYY-MEKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAY 612

Query:    69 NHIGYGQETVRYYXXXXXXXXXXXA-NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVK 127
             N  G G  T                 N+S   +    + I W PP    +NGQI  Y ++
Sbjct:   613 NKHGPGVSTPDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIR 672

Query:   128 FHKKIDANNVIHR--NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR-- 183
             + K    ++V     + TQ   +   L+ G EY+  V A+T  G GP +  LS  T    
Sbjct:   673 YRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESD 732

Query:   184 -DMVRAP-----LGVKALATSDQSVEVWWKPVPAGRGKIL-GYQIFYTMTA--VEDLD-E 233
              D  R P     L V+ L TS   + V W P P  +  ++ GY I Y + +   + +  +
Sbjct:   733 LDETRVPEVPSSLHVRPLVTS---IVVSWTP-PENQNIVVRGYAIGYGIGSPHAQTIKVD 788

Query:   234 WSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESA 274
             + Q+   +      +    T+ A  ++ E     +PL ESA
Sbjct:   789 YKQRYYTIENLDPSSHYVITLKAFNNVGE----GIPLYESA 825

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P16621	LAR_DROME	3, ., 1, ., 3, ., 4, 8	0.5813	0.7330	0.1542	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	427
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	2e-11
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	2e-10
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	2e-09
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	4e-08
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	4e-08
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	3e-07
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	5e-07
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	8e-07
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	4e-04

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 59.2 bits (143), Expect = 2e-11
 Identities = 23/82 (28%), Positives = 39/82 (47%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
            PP+N+     T   V ++W+PP      G IV Y V++ ++      ++   + T    
Sbjct: 2   SPPSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEGSEWKEVNVTPSSTSYTL 61

Query: 150 SNLEEGIEYSAEVQAITKAGPG 171
           + L+ G EY   V+A+  AG G
Sbjct: 62  TGLKPGTEYEFRVRAVNGAGEG 83

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 4/94 (4%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRNTTQTKA 147
            PP N+     T   V ++W PP      G I  Y V++ +K   +   V     ++T  
Sbjct: 2   SPPTNLRVTDVTSTSVTLSWTPP--EDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSY 59

Query: 148 VFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
             + L+ G EY   V+A+   G  P S  +++ T
Sbjct: 60  TLTGLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT--TQTKA 147
             P N++    T   + ++W PP     NG I  Y V++                T T  
Sbjct: 1   SAPTNLTVTDVTSTSLTLSWSPP---PGNGPITGYEVEYRPVNGGEEWKEITVPGTTTSY 57

Query: 148 VFSNLEEGIEYSAEVQAITKAGPGPWS 174
             + L+ G EY   VQA+  AG GP S
Sbjct: 58  TLTGLKPGTEYEVRVQAVNGAGEGPPS 84

Length = 84

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 50.3 bits (120), Expect = 4e-08
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 9  TIELVWSQP--TQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          ++ L W  P      G I+GYRV+Y       KE  V   + S+ +T L+ G EYEFR+ 
Sbjct: 16 SVTLSWEPPPDDGITGYIVGYRVEYREEGSEWKEVNVTPSSTSYTLTGLKPGTEYEFRVR 75

Query: 67 GQNHIGYG 74
            N  G G
Sbjct: 76 AVNGAGEG 83

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 50.6 bits (121), Expect = 4e-08
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 9  TIELVWSQPTQTYGEILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          ++ L W+ P    G I GY V+Y         +  +      S+ +T L+ G EYEFR+ 
Sbjct: 16 SVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVR 75

Query: 67 GQNHIGYGQ--ETVRYYT 82
            N  G     E+V   T
Sbjct: 76 AVNGGGESPPSESVTVTT 93

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 47.9 bits (114), Expect = 3e-07
 Identities = 25/121 (20%), Positives = 35/121 (28%), Gaps = 30/121 (24%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  ++    +  SV + W P     G I GY + Y         +W +           
Sbjct: 3   PPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREK---GSGDWKE----------- 48

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                            + +     S  LT L+  TEY   V A    G    S  VTV 
Sbjct: 49  ----------------VEVTPGSETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTVT 92

Query: 308 V 308
            
Sbjct: 93  T 93

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 31/114 (27%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
           AP  +     +  S+ + W P P G G I GY++ Y    V   +EW + ++P T +   
Sbjct: 2   APTNLTVTDVTSTSLTLSWSP-PPGNGPITGYEVEYRP--VNGGEEWKEITVPGTTT--- 55

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
                                    S  LT L+  TEY V V A    G G  S
Sbjct: 56  -------------------------SYTLTGLKPGTEYEVRVQAVNGAGEGPPS 84

Length = 84

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 46.3 bits (110), Expect = 8e-07
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKN--MSFLITNLERGVEYEFRIA 66
          ++ L WS P    G I GY V+Y       +   +       S+ +T L+ G EYE R+ 
Sbjct: 15 SLTLSWSPPPGN-GPITGYEVEYRPVNGGEEWKEITVPGTTTSYTLTGLKPGTEYEVRVQ 73

Query: 67 GQNHIGYGQET 77
            N  G G  +
Sbjct: 74 AVNGAGEGPPS 84

Length = 84

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 38.7 bits (90), Expect = 4e-04
 Identities = 24/111 (21%), Positives = 35/111 (31%), Gaps = 30/111 (27%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  ++    +  SV + W+P P       GY + Y +   E+  EW +           
Sbjct: 3   PPSNLRVTDVTSTSVTLSWEPPPDDGI--TGYIVGYRVEYREEGSEWKE----------- 49

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
                                P + S  LT L+  TEY   V A    G G
Sbjct: 50  -----------------VNVTPSSTSYTLTGLKPGTEYEFRVRAVNGAGEG 83

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	427
KOG4221|consensus	1381		100.0
KOG4221|consensus	1381		100.0
KOG3513|consensus	1051		100.0
KOG3513|consensus	1051		99.95
KOG0196|consensus	996		99.79
KOG0196|consensus	996		99.71
KOG4222|consensus	1281		99.68
KOG4222|consensus	1281		99.56
KOG4258|consensus	1025		99.55
KOG4258|consensus	1025		99.41
PF00041	85	fn3: Fibronectin type III domain; InterPro: IPR003	99.29
PF00041	85	fn3: Fibronectin type III domain; InterPro: IPR003	99.2
KOG4802|consensus	516		98.85
cd00063	93	FN3 Fibronectin type 3 domain; One of three types	98.71
KOG4802|consensus	516		98.62
cd00063	93	FN3 Fibronectin type 3 domain; One of three types	98.55
COG3401	343	Fibronectin type 3 domain-containing protein [Gene	98.52
PF10179	300	DUF2369: Uncharacterised conserved protein (DUF236	98.5
smart00060	83	FN3 Fibronectin type 3 domain. One of three types	98.31
KOG3632|consensus	1335		98.23
KOG3632|consensus	1335		98.08
COG3401	343	Fibronectin type 3 domain-containing protein [Gene	98.0
smart00060	83	FN3 Fibronectin type 3 domain. One of three types	97.97
PF10179	300	DUF2369: Uncharacterised conserved protein (DUF236	97.89
KOG4367|consensus	699		97.56
KOG4152|consensus	830		97.46
KOG4152|consensus	830		97.38
PF09294	106	Interfer-bind: Interferon-alpha/beta receptor, fib	97.35
PF09294	106	Interfer-bind: Interferon-alpha/beta receptor, fib	97.21
KOG4367|consensus	699		97.12
KOG4806|consensus	454		96.85
KOG4228|consensus	1087		96.7
PF01108	107	Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH	96.67
PF01108	107	Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH	96.55
COG4733	952	Phage-related protein, tail component [Function un	96.09
COG4733	952	Phage-related protein, tail component [Function un	95.64
KOG0613|consensus	1205		95.36
KOG0613|consensus	1205		95.23
PF09067	104	EpoR_lig-bind: Erythropoietin receptor, ligand bin	94.9
PF09067	104	EpoR_lig-bind: Erythropoietin receptor, ligand bin	94.53
PLN02533	427	probable purple acid phosphatase	92.29
PLN02533	427	probable purple acid phosphatase	90.83
PF09240	99	IL6Ra-bind: Interleukin-6 receptor alpha chain, bi	90.3
KOG4806|consensus	454		90.19
TIGR00868	863	hCaCC calcium-activated chloride channel protein 1	89.89
PF07495	66	Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi	89.24
KOG1225|consensus	525		88.5
KOG4228|consensus	1087		87.34
KOG1225|consensus	525		86.9
PF09240	99	IL6Ra-bind: Interleukin-6 receptor alpha chain, bi	85.36
PF07495	66	Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi	84.46

>KOG4221|consensus

Probab=100.00  E-value=5.2e-36  Score=294.06  Aligned_cols=358  Identities=27%  Similarity=0.381  Sum_probs=282.7

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce-E
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR-Y   80 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~-~   80 (427)
                      .-+..+.+.++|.+|...++++..|.+.|........+... .......++.+|.|.+.|.|+|+|.|..|.+.++.. .
T Consensus       437 ~~~~srfi~~tw~~p~~~~g~i~~~~v~~~~~~~~rer~~~tss~g~~~tv~nl~p~t~Y~~rv~A~n~~g~g~sS~pLk  516 (1381)
T KOG4221|consen  437 NLVSSRFIQLTWRPPAQISGNISTYTVFYKVEGDVRERLQNTSSPGIQVTVQNLSPLTMYFFRVRAKNEAGSGESSAPLK  516 (1381)
T ss_pred             ccccceeEEEeecCccccCCCcceEEEEEecCCchhhhheeccCCceEEEeeecccceeEEEEEeccCcccCCccCCceE
Confidence            34567889999998888889999999999876654433333 222288999999999999999999999999986643 4


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEE
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~  160 (427)
                      +.+..+   +++. ++....+..++.+.|++|  .-.+++|.+|.+.|... +...+.....+..+++|++|.+.|.|.|
T Consensus       517 V~t~pE---gp~~-~~a~ats~~ti~v~WepP--~~~n~~I~~yk~~ys~~-~~~~~~~~~~n~~e~ti~gL~k~TeY~~  589 (1381)
T KOG4221|consen  517 VTTQPE---GPVQ-LQAYATSPTTILVTWEPP--PFGNGPITGYKLFYSED-DTGKELRVENNATEYTINGLEKYTEYSI  589 (1381)
T ss_pred             EecCCC---CCcc-ccccccCcceEEEEecCC--CCCCCCceEEEEEEEcC-CCCceEEEecCccEEEeecCCCccceEE
Confidence            444333   3344 888899999999999999  46788999999999987 4555666677899999999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEcccccCC-CCCceEEEeeeCcEEEEEeeeCCCC--CCceeEEEEEEEecccccccccccc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMTARDMVR-APLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTMTAVEDLDEWSQK  237 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t~~~~p~-~p~~l~~~~~~~~si~v~W~~p~~~--~g~i~~Y~I~~~~~~~~~~~~~~~~  237 (427)
                      +|.|+|.+|.|..|..+.+.|..+.|. ||.|+++...++++|.|+|.+|...  +|.+.+|+|+|+.........+   
T Consensus       590 ~vvA~N~~G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~---  666 (1381)
T KOG4221|consen  590 RVVAYNSAGSGVSSADITVRTLSDVPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNE---  666 (1381)
T ss_pred             EEEEecCCCCCCCCCceEEEeccCCCCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccce---
Confidence            999999999999999999999877775 5556999999999999999999863  6899999999997633222211   


Q ss_pred             cccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCC------
Q psy8774         238 SIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPE------  311 (427)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~------  311 (427)
                                                 ....++...+.+.+|+|++.|.|+|.|.+..|.|++|++..+.|.-.      
T Consensus       667 ---------------------------t~v~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~~d~~e~v  719 (1381)
T KOG4221|consen  667 ---------------------------TVVKGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPESDLDERV  719 (1381)
T ss_pred             ---------------------------eecccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccCccccccccC
Confidence                                       22334778899999999999999999999999999999999998522      


Q ss_pred             -CCCcceEEeecCCCeEEEEecCCCcCCCc--eEEEEEehe---e-ecceeeeeeEEEEeecccccccceEEEEEeeccc
Q psy8774         312 -DVPLSLRAHDVSTHSMTLSWSPPIKLNPV--KYKEVSEKI---Q-ERRLQKYGQYRYFETRDESYIGKRVERMEVRGRK  384 (427)
Q Consensus       312 -~~P~~l~~~~~~~~~v~l~W~~P~~~~g~--~Y~i~~~~~---~-~~~l~~~t~y~~~~~~~~~~~~~~~~~v~a~~~~  384 (427)
                       .+|..|.+. ....++.++|.||..++..  +|+|.|+..   . ....+-..+-+++....|.+...|.++++|.|..
T Consensus       720 p~~ps~l~~~-~g~~si~vsW~Pp~~~~~~vrgY~ig~r~g~~~p~~~tIrl~~~~s~y~l~~Le~~~~YvVkL~AfNn~  798 (1381)
T KOG4221|consen  720 PGKPSELHVH-PGSNSIVVSWTPPPHPNIVVRGYKIGYRPGSGIPDTGTIRLDEKVSYYNLEQLEPNRDYVVKLRAFNNH  798 (1381)
T ss_pred             CCCCceeeec-cCceeEEEEeCCCCChhhhhcceEEeeecccCCCCCccEEecceeeEEEEEecccCceEEEEEEEeccC
Confidence             233333333 5788999999999988653  999999421   1 1112222344556777799999999999999999


Q ss_pred             CCCCcchhhhHHHH
Q psy8774         385 GRGRPKKRWMDCVN  398 (427)
Q Consensus       385 g~g~p~~~~~~~~~  398 (427)
                      |.|.|..+...+.+
T Consensus       799 gdG~p~y~~~~tR~  812 (1381)
T KOG4221|consen  799 GDGNPIYESVKTRS  812 (1381)
T ss_pred             CCCcceeeeeeecc
Confidence            99999755555543

>KOG4221|consensus

Probab=100.00  E-value=3.6e-36  Score=295.18  Aligned_cols=382  Identities=23%  Similarity=0.322  Sum_probs=285.1

Q ss_pred             CccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCccc-ceEEe
Q psy8774           4 EEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET-VRYYT   82 (427)
Q Consensus         4 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~-~~~~~   82 (427)
                      ..+..++.+.|++|..++++|++|+|.|...+...|... ..+..+++|.+|.+.|+|.|+|+|+|..|.|..+ .+.+.
T Consensus       531 ats~~ti~v~WepP~~~n~~I~~yk~~ys~~~~~~~~~~-~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~  609 (1381)
T KOG4221|consen  531 ATSPTTILVTWEPPPFGNGPITGYKLFYSEDDTGKELRV-ENNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVR  609 (1381)
T ss_pred             ccCcceEEEEecCCCCCCCCceEEEEEEEcCCCCceEEE-ecCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEE
Confidence            356788999999999899999999999998755555544 6788999999999999999999999999999855 67899


Q ss_pred             CCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-E-EEeeeeeEEEEccCCCCcEEEE
Q psy8774          83 TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-I-HRNTTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        83 t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~-~~~~~~~~~~i~~L~p~t~Y~~  160 (427)
                      |..+.|..||.|+++...++++|.|+|.+|.....+|.+.+|.|+|+........ + ....+.+++.+.+|+|++.|.|
T Consensus       610 Tlsd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n~~~~l~~~Lep~T~Y~v  689 (1381)
T KOG4221|consen  610 TLSDVPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGNTTQYLFNGLEPNTQYRV  689 (1381)
T ss_pred             eccCCCCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccchhhhHhhcCCCCceEEE
Confidence            9999999999999999999999999999999889999999999999966433333 2 2234688899999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEcccc-----cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccc-cccc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMTARD-----MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVED-LDEW  234 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t~~~-----~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~-~~~~  234 (427)
                      +|.|++.+|.|++|+.+.+.|...     .|.+|..|.+. ...++|.|+|.||...+-.+.+|+|.|+...+.. ....
T Consensus       690 rIsa~t~nGtGpaS~w~~aeT~~~d~~e~vp~~ps~l~~~-~g~~si~vsW~Pp~~~~~~vrgY~ig~r~g~~~p~~~tI  768 (1381)
T KOG4221|consen  690 RISAMTVNGTGPASEWVSAETPESDLDERVPGKPSELHVH-PGSNSIVVSWTPPPHPNIVVRGYKIGYRPGSGIPDTGTI  768 (1381)
T ss_pred             EEEEeccCCCCCcccceeccCccccccccCCCCCceeeec-cCceeEEEEeCCCCChhhhhcceEEeeecccCCCCCccE
Confidence            999999999999999999999432     23455555553 3678999999999977778999999996432211 0000


Q ss_pred             ccc----cccccc------------------------------------------------------cccceeEEeeec-
Q psy8774         235 SQK----SIPLTE------------------------------------------------------SSNIARIFYTMT-  255 (427)
Q Consensus       235 ~~~----~~~~~~------------------------------------------------------~~~~~~~~~~~~-  255 (427)
                      ..+    .+.+..                                                      ++..++..|... 
T Consensus       769 rl~~~~s~y~l~~Le~~~~YvVkL~AfNn~gdG~p~y~~~~tR~~~~~~~~v~tp~~ppvgv~A~~~S~tsI~v~w~~~~  848 (1381)
T KOG4221|consen  769 RLDEKVSYYNLEQLEPNRDYVVKLRAFNNHGDGNPIYESVKTRSATDPTSPVDTPMLPPVGVRANALSSTSIRVTWADNK  848 (1381)
T ss_pred             EecceeeEEEEEecccCceEEEEEEEeccCCCCcceeeeeeeccCCCcCCcCCCCCCCcccccccccccceEEEEEecCC
Confidence            000    000000                                                      000111111110 


Q ss_pred             -cccc----ccccc----------ccccCCCCceeccCCCCCCeEEEEEEEEeccC-CCCCccceEEeec---CCCCCcc
Q psy8774         256 -AVED----LDEWS----------QKSVPLTESAELTSLEKFTEYAVAVAARTVNG-LGRLSGKVTVKVK---PEDVPLS  316 (427)
Q Consensus       256 -~~~~----~~~~~----------~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G-~g~~s~~~~~~t~---~~~~P~~  316 (427)
                       ...+    ...|.          ........++.+.+|+|++.|.|.|.+...++ .|.+|+.+..+|.   |..||.+
T Consensus       849 ~~t~~~~~yTVr~~~~gi~~~~~~~~~~~t~ls~~v~glkpnt~yEfav~~~~~~~r~stwsmsv~~~tle~~P~sPP~d  928 (1381)
T KOG4221|consen  849 DQTTDNRIYTVRWSLTGIRNGTLYRYDNSTDLSYLVGGLKPNTPYEFAVMVVKRNRRESTWSMSVENRTLELVPSSPPRD  928 (1381)
T ss_pred             CccccceEEEEEEeecccccceeEEEecccccceeccCcCcCChhhhhhhhhhccCcCCcccceeeeeecccCCCCCChh
Confidence             0000    11222          12234455788999999999999999987433 8889988888874   5678999


Q ss_pred             eEEeecC-CCeEEEEecCCCcCCCc--eEEEEEeheeecceeeeeeEEE------EeecccccccceEEEEEeecccCCC
Q psy8774         317 LRAHDVS-THSMTLSWSPPIKLNPV--KYKEVSEKIQERRLQKYGQYRY------FETRDESYIGKRVERMEVRGRKGRG  387 (427)
Q Consensus       317 l~~~~~~-~~~v~l~W~~P~~~~g~--~Y~i~~~~~~~~~l~~~t~y~~------~~~~~~~~~~~~~~~v~a~~~~g~g  387 (427)
                      +++.... ++++.+.|.||.++||.  .|.|.|..-........+...+      .....+++...|.|+|+|++.+|.|
T Consensus       929 ~tv~p~e~P~~v~v~WqPp~e~nG~I~~Yii~Ys~~~n~~~~dWt~~t~~g~~L~~~v~~l~p~t~yffkiQAr~~kG~g 1008 (1381)
T KOG4221|consen  929 LTVQPDEKPTTVIVHWQPPTEPNGEITEYIIYYSTDGNTPEHDWTIETTAGAELSHQVPNLDPDTGYFFKIQARNEKGPG 1008 (1381)
T ss_pred             ceecccCCCCccccccCCCcCCCCceeeEEEEEecCCCCchhhceeeecccchhhhccCCCCCCCceEEEEEeeccCCCC
Confidence            9988654 89999999999999993  8999876333222222222211      2456678899999999999999999

>KOG3513|consensus

Probab=100.00  E-value=2.2e-34  Score=284.25  Aligned_cols=357  Identities=25%  Similarity=0.275  Sum_probs=281.2

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe--ecCc---ceEEEcCCCCCceEEEEEEEEeccCcCcc
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--NSKN---MSFLITNLERGVEYEFRIAGQNHIGYGQE   76 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~---~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~   76 (427)
                      +.+++++++.|+|.+..+.+++|..|.|+++......|..+.  +...   .+.++.+|.|...|+|||.|.|..|.|.+
T Consensus       623 ~~~i~~t~~~lsW~~g~dn~SpI~~Y~iq~rt~~~~~W~~v~~vp~~~~~~~sa~vv~L~Pwv~YeFRV~AvN~iG~geP  702 (1051)
T KOG3513|consen  623 VDDISDTTARLSWSPGSDNNSPIEKYTIQFRTPFPGKWKAVTTVPGNITGDESATVVNLSPWVEYEFRVVAVNSIGIGEP  702 (1051)
T ss_pred             EeeeccceEEEEeecCCCCCCCceEEeEEecCCCCCcceEeeECCCcccCccceeEEccCCCcceEEEEEEEcccccCCC
Confidence            457889999999999999999999999999988777787765  2222   35778899999999999999999999986


Q ss_pred             c--ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeee---eeEEEEcc
Q psy8774          77 T--VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTT---QTKAVFSN  151 (427)
Q Consensus        77 ~--~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~i~~  151 (427)
                      +  +..+.|.+++|...|.++.......+.+.|+|+|.+.+..||+..+|.|.|+..+....|....+.   ...+.+.+
T Consensus       703 S~pS~~~rT~ea~P~~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~~W~~~~v~~~d~~~~V~~~  782 (1051)
T KOG3513|consen  703 SPPSEKVRTPEAAPSVNPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADKEWKEVIVSNQDQPRYVVSN  782 (1051)
T ss_pred             CCCccceecCCCCCccCCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCcccceeEecccCCceEEEcC
Confidence            5  567899999999999999999999999999999999888999999999999999655466555433   36666665


Q ss_pred             --CCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccc-cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccc
Q psy8774         152 --LEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD-MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAV  228 (427)
Q Consensus       152 --L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~-~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~  228 (427)
                        ..|++.|.+.|.|+|..|.|+.|..+.+.+.++ |+.+|+.+.+...+.+.+.|+|++|...+|.+.+|+|+|+..+.
T Consensus       783 ~st~~~tpyevKVqa~N~~GeGp~s~~~v~~S~Ed~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~  862 (1051)
T KOG3513|consen  783 ESTEPFTPYEVKVQAINDQGEGPESQVTVGYSGEDEPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINE  862 (1051)
T ss_pred             CCCCCcceeEEEEEEecCCCCCCCCceEEEEcCCCCCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCC
Confidence              567999999999999999999999999888554 56899999999999999999999999889999999999999854


Q ss_pred             ccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      ......                             .....++.++..|+||++.+.|.|.|+|+|.+|.|+.|......|
T Consensus       863 ~~~~~~-----------------------------~~~i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt  913 (1051)
T KOG3513|consen  863 KEGSLS-----------------------------RVQIAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTT  913 (1051)
T ss_pred             Cccccc-----------------------------ceeecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccc
Confidence            431111                             233447888999999999999999999999999999998888876


Q ss_pred             cCC--C-----CCcceEEeecCCCeEEEEecCCC----cCCCceEEEEEeheeec--ceeee--eeEEEEeecccccccc
Q psy8774         309 KPE--D-----VPLSLRAHDVSTHSMTLSWSPPI----KLNPVKYKEVSEKIQER--RLQKY--GQYRYFETRDESYIGK  373 (427)
Q Consensus       309 ~~~--~-----~P~~l~~~~~~~~~v~l~W~~P~----~~~g~~Y~i~~~~~~~~--~l~~~--t~y~~~~~~~~~~~~~  373 (427)
                      .+.  .     +|. -.+.......+.|.|..-.    +..+.+|.|.+..-...  .....  ..-.|-...++  ..+
T Consensus       914 ~k~pPs~~~~~p~g-~~~~~~~~~~~~l~w~~v~~~~nes~v~gYkV~~~~~~~~~~~~~~t~~~~~~~~~p~~~--~~~  990 (1051)
T KOG3513|consen  914 KKAPPSQVDIAPPG-NFIWKFSASILLLLWLLVSAFENESEVGGYKVLYREDLQNDIEIILTMKLDAEFPEPSDL--DGK  990 (1051)
T ss_pred             cCCCCcccccCCCc-ceEEeeeeeEEEEEEeeEEEEeecccCcceEEEEeecccCCceeEecccccccccCcccc--CCc
Confidence            422  1     333 3344477888999997432    23456898876521111  11110  00011122222  277


Q ss_pred             eEEEEEeecccCCCCcc
Q psy8774         374 RVERMEVRGRKGRGRPK  390 (427)
Q Consensus       374 ~~~~v~a~~~~g~g~p~  390 (427)
                      |.++|++.+..|.|...
T Consensus       991 y~i~v~~~~~ggdg~~s 1007 (1051)
T KOG3513|consen  991 YDIKVRGYSPGGDGTIS 1007 (1051)
T ss_pred             ceeEeccccCCCCCCcC
Confidence            89999999999999654

>KOG3513|consensus

Probab=99.95  E-value=2e-25  Score=221.16  Aligned_cols=306  Identities=23%  Similarity=0.281  Sum_probs=231.5

Q ss_pred             cCCCCCceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEcc
Q psy8774          53 TNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI  132 (427)
Q Consensus        53 ~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~  132 (427)
                      ..|...-.|...+.+.-.. .+..+...+..    |++||..+.+...+.+++.|+|.+.+  +.+++|..|.|+.+...
T Consensus       584 v~l~~~G~Y~C~aqT~~Ds-~s~~A~l~V~g----pPgpP~~v~~~~i~~t~~~lsW~~g~--dn~SpI~~Y~iq~rt~~  656 (1051)
T KOG3513|consen  584 VSLEDSGKYTCVAQTALDS-ASARADLLVRG----PPGPPPDVHVDDISDTTARLSWSPGS--DNNSPIEKYTIQFRTPF  656 (1051)
T ss_pred             eccccCceEEEEEEEeecc-hhcccceEEec----CCCCCCceeEeeeccceEEEEeecCC--CCCCCceEEeEEecCCC
Confidence            3578888999888874322 12233344544    55667799999999999999999994  66688999999998772


Q ss_pred             CCCceEEEe---eee---eEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE-EEcccccC-CCCCceEEEeeeCcEEEE
Q psy8774         133 DANNVIHRN---TTQ---TKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS-LMTARDMV-RAPLGVKALATSDQSVEV  204 (427)
Q Consensus       133 ~~~~~~~~~---~~~---~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~-~~t~~~~p-~~p~~l~~~~~~~~si~v  204 (427)
                       ...|....   ...   .+..+.+|.|+..|+|||.|.|..|.|.+|.+.. .+|.++.| ..|.++.......+.+.|
T Consensus       657 -~~~W~~v~~vp~~~~~~~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~pS~~~rT~ea~P~~~P~nv~g~g~~~~eLvI  735 (1051)
T KOG3513|consen  657 -PGKWKAVTTVPGNITGDESATVVNLSPWVEYEFRVVAVNSIGIGEPSPPSEKVRTPEAAPSVNPSNVKGGGGSPTELVI  735 (1051)
T ss_pred             -CCcceEeeECCCcccCccceeEEccCCCcceEEEEEEEcccccCCCCCCccceecCCCCCccCCccccccCCCCceEEE
Confidence             33343332   111   3577899999999999999999999998776654 67766666 789999998888999999


Q ss_pred             EeeeCCC--CCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceecc--CCC
Q psy8774         205 WWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELT--SLE  280 (427)
Q Consensus       205 ~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~L~  280 (427)
                      +|++.+.  .||.-.+|+|.|+..+..  ..|...                           .........+.+.  ...
T Consensus       736 tW~Pl~~~~qNG~gfgY~Vswr~~g~~--~~W~~~---------------------------~v~~~d~~~~V~~~~st~  786 (1051)
T KOG3513|consen  736 TWEPLPEEEQNGPGFGYRVSWRPQGAD--KEWKEV---------------------------IVSNQDQPRYVVSNESTE  786 (1051)
T ss_pred             EeccCCHHHccCCCceEEEEEEeCCCC--ccccee---------------------------EecccCCceEEEcCCCCC
Confidence            9999875  478999999999998432  145211                           1111223444444  456


Q ss_pred             CCCeEEEEEEEEeccCCCCCccceEEeec---CCCCCcceEEeecCCCeEEEEecCCCcCCCc--eEEEEEeheeecc--
Q psy8774         281 KFTEYAVAVAARTVNGLGRLSGKVTVKVK---PEDVPLSLRAHDVSTHSMTLSWSPPIKLNPV--KYKEVSEKIQERR--  353 (427)
Q Consensus       281 p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~---~~~~P~~l~~~~~~~~~v~l~W~~P~~~~g~--~Y~i~~~~~~~~~--  353 (427)
                      |++.|.+.|+|+|..|+|+.|..+.+-+.   |..+|..+.+...+.+.+.|+|++|...||.  +|.|.|.......  
T Consensus       787 ~~tpyevKVqa~N~~GeGp~s~~~v~~S~Ed~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~~  866 (1051)
T KOG3513|consen  787 PFTPYEVKVQAINDQGEGPESQVTVGYSGEDEPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEGS  866 (1051)
T ss_pred             CcceeEEEEEEecCCCCCCCCceEEEEcCCCCCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCCCccc
Confidence            79999999999999999999987777653   6667888889999999999999999999995  9999987555442  


Q ss_pred             ---eeeeeeEEEEeecccccccceEEEEEeecccCCCCcchhhhH
Q psy8774         354 ---LQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKKRWMD  395 (427)
Q Consensus       354 ---l~~~t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~~~~~  395 (427)
                         .+-.+.-.+.....|++...|.|.|+|.|.+|.|++..+...
T Consensus       867 ~~~~~i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~  911 (1051)
T KOG3513|consen  867 LSRVQIAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENV  911 (1051)
T ss_pred             ccceeecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceec
Confidence               111234466688899999999999999999998887654433

>KOG0196|consensus

Probab=99.79  E-value=1.3e-17  Score=159.62  Aligned_cols=193  Identities=23%  Similarity=0.323  Sum_probs=150.6

Q ss_pred             CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE-------E-----eeeeeEEEEccCC
Q psy8774          86 GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH-------R-----NTTQTKAVFSNLE  153 (427)
Q Consensus        86 ~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~-------~-----~~~~~~~~i~~L~  153 (427)
                      ..||.+|.++... ++.+++.|.|.+|.......++ .|.|.++.-........       .     .-+.++..+.+|.
T Consensus       329 T~PPSaP~nlis~-vn~Ts~~L~W~~P~d~GGR~Di-~y~v~Ck~c~~~~~~C~~Cg~~V~f~P~q~gLt~~~V~v~~L~  406 (996)
T KOG0196|consen  329 TRPPSAPRNLISN-VNGTSLILEWSPPADTGGREDI-TYNVICKKCGGGRGACEPCGDNVRFTPRQRGLTETSVTVSDLL  406 (996)
T ss_pred             CCCCCccceeeee-cccceEEEEecCCcccCCCcce-EEEEEeeccCCCCCccccCCCCceECCCCCCcccceEEEeccc
Confidence            3466788888755 8999999999999754444445 68888765532221111       0     1337889999999


Q ss_pred             CCcEEEEEEEEeeCCCC-C---CCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccc
Q psy8774         154 EGIEYSAEVQAITKAGP-G---PWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVE  229 (427)
Q Consensus       154 p~t~Y~~~V~a~~~~g~-~---~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~  229 (427)
                      |.+.|.|.|.|+|+... +   .....+.++|....|++..+++......+++.|+|..|..++|.+..|+|.|.+.+..
T Consensus       407 ah~~YTFeV~AvNgVS~lsp~~~~~a~vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~  486 (996)
T KOG0196|consen  407 AHTNYTFEVEAVNGVSDLSPFPRQFASVNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDED  486 (996)
T ss_pred             cccccEEEEEEeecccccCCCCCcceeEEeeccccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccc
Confidence            99999999999986332 2   2345677888777888889999999999999999999999999999999999987321


Q ss_pred             cccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         230 DLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                      +..                               ........+..+|.+|+|++.|.|+|+|.+..|.|.+|....++|.
T Consensus       487 e~~-------------------------------~~~~~t~~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~  535 (996)
T KOG0196|consen  487 ERS-------------------------------YSTLKTKTTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTL  535 (996)
T ss_pred             ccc-------------------------------eeEEecccceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeec
Confidence            111                               2234456778999999999999999999999999999999999997


Q ss_pred             CC
Q psy8774         310 PE  311 (427)
Q Consensus       310 ~~  311 (427)
                      ++
T Consensus       536 ~~  537 (996)
T KOG0196|consen  536 PS  537 (996)
T ss_pred             Cc
Confidence            65

>KOG0196|consensus

Probab=99.71  E-value=9.7e-16  Score=146.89  Aligned_cols=179  Identities=25%  Similarity=0.348  Sum_probs=142.2

Q ss_pred             CCCccceEEEEEeeCCCCCCC-cceEeEEEEEEecCccce-------eEe-----ecCcceEEEcCCCCCceEEEEEEEE
Q psy8774           2 LKEEPEVTIELVWSQPTQTYG-EILGYRVKYGVREHTLKE-------NLV-----NSKNMSFLITNLERGVEYEFRIAGQ   68 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~-------~~~-----~~~~~~~~~~~L~p~t~Y~~~V~a~   68 (427)
                      +.++..+++.|+|.+|.+.+| ....|.|.++......-.       +..     ...+++..+.+|.|.+.|+|.|.|+
T Consensus       339 is~vn~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg~~V~f~P~q~gLt~~~V~v~~L~ah~~YTFeV~Av  418 (996)
T KOG0196|consen  339 ISNVNGTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCGDNVRFTPRQRGLTETSVTVSDLLAHTNYTFEVEAV  418 (996)
T ss_pred             eeecccceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCCCCceECCCCCCcccceEEEeccccccccEEEEEEe
Confidence            567889999999999997666 446899999876533211       111     4567889999999999999999999


Q ss_pred             eccC-cCc----ccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-EEEee
Q psy8774          69 NHIG-YGQ----ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-IHRNT  142 (427)
Q Consensus        69 ~~~g-~~~----~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~  142 (427)
                      |+.. .++    ...+.+.|...+|+. ...++....+.++++|+|..|  +..+|.+..|+|.|.+.+..... .....
T Consensus       419 NgVS~lsp~~~~~a~vnItt~qa~ps~-V~~~r~~~~~~~sitlsW~~p--~~png~ildYEvky~ek~~~e~~~~~~~t  495 (996)
T KOG0196|consen  419 NGVSDLSPFPRQFASVNITTNQAAPSP-VSVLRQVSRTSDSITLSWSEP--DQPNGVILDYEVKYYEKDEDERSYSTLKT  495 (996)
T ss_pred             ecccccCCCCCcceeEEeeccccCCCc-cceEEEeeeccCceEEecCCC--CCCCCcceeEEEEEeeccccccceeEEec
Confidence            9764 222    235667777777754 558899999999999999999  57788899999999987533333 33445


Q ss_pred             eeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEccc
Q psy8774         143 TQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR  183 (427)
Q Consensus       143 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~  183 (427)
                      ..+..+|.+|+|++.|.|+|+|...+|.|++|....+.|..
T Consensus       496 ~~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~  536 (996)
T KOG0196|consen  496 KTTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLP  536 (996)
T ss_pred             ccceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecC
Confidence            57899999999999999999999999999999999999843

>KOG4222|consensus

Probab=99.68  E-value=6.6e-16  Score=152.84  Aligned_cols=276  Identities=19%  Similarity=0.241  Sum_probs=197.3

Q ss_pred             CCCccceEEEEEeeCCCC-CCCcceEeEEEEEEe-cCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCccc-
Q psy8774           2 LKEEPEVTIELVWSQPTQ-TYGEILGYRVKYGVR-EHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET-   77 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~-~~~~i~~Y~v~~~~~-~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~-   77 (427)
                      +.+++.+++.|+|.+... +..++.+|++++-.. -+..|.... ....+.+.|.+|.|++.|.|.|++.|..|.+.++ 
T Consensus       535 v~~v~~~~v~LsW~~~s~sg~vP~s~yiieafs~~~~etw~~ta~~v~~t~~~I~gL~P~~sylf~vRa~n~~Gis~Ps~  614 (1281)
T KOG4222|consen  535 VVNVSRTSVTLSWQPTSPSGAVPASGYIIEAFSPDLGETWQTTAGRVKTTTYAIRGLKPNLSYLFLVRAENEQGISDPST  614 (1281)
T ss_pred             cccCCCceEEecccCCCCCCccccchhHHHHhhhhhcccccccccccccceeeecCcCccceeeeeeeccccccccCCcc
Confidence            456788999999999874 456889999997543 344576665 6788999999999999999999999999977644 


Q ss_pred             -ceEEeCCCCCCCCCC------------eeeE---EEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCC-CceEEE
Q psy8774          78 -VRYYTTPEGPPTGPP------------ANIS---HHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDA-NNVIHR  140 (427)
Q Consensus        78 -~~~~~t~~~~p~~~p------------~~~~---~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~-~~~~~~  140 (427)
                       +..++|.+..+..+-            ..++   ....++.++.+.|..+.. .....+.+|.|.|+..... ..+...
T Consensus       615 ~S~~vrta~a~~~~a~ad~~k~~~~ls~~l~~l~~~~~L~asslr~~w~~~kq-~~~~~i~g~~I~~r~~~~~~a~~s~~  693 (1281)
T KOG4222|consen  615 SSDPVRTAPADAAAAGADHQKVQRELSNELLRLSNPNVLNASSLRLGWTKDKQ-HGSQYIQGYRISYRSLGSQLAQWSNA  693 (1281)
T ss_pred             cCCccccCCCChhhhhhhHHHHHHhhcccceeeccccccchhheeeeeeeecc-cCcccccceEEEeccCcccccccccc
Confidence             223444332221100            0112   224578899999998852 3345788999999987441 122222


Q ss_pred             ---eeeeeEEEEccCCCCcEEEEEEEEeeCCCC---CCCCCCeEEEcccccC-CCCCce---EEEeeeCcEEEEEeeeCC
Q psy8774         141 ---NTTQTKAVFSNLEEGIEYSAEVQAITKAGP---GPWSPKLSLMTARDMV-RAPLGV---KALATSDQSVEVWWKPVP  210 (427)
Q Consensus       141 ---~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~---~~~s~~~~~~t~~~~p-~~p~~l---~~~~~~~~si~v~W~~p~  210 (427)
                         .....++.+.+|.|++.|+|.++-+..+|.   |..+....+.|.+.+| .+|.++   ..-..+.+++.|+|.+|+
T Consensus       694 ~v~~~t~~s~v~~nl~p~t~ye~f~~Pf~~~~~s~~g~pS~sk~alt~e~~PSapp~~~~~~s~~~~n~Ta~~Vsw~~pp  773 (1281)
T KOG4222|consen  694 GVTVPTPESVVVPNLKPGTNYEFFVRPFFPHGYSIQGAPSNSKTALTLEEPPSAPPQGVQHVSKGSYNGTAGSVSWAPPP  773 (1281)
T ss_pred             ceeccCCcceeccccCCCccceeeccCccCCCcceecCCcccccccccccCCCCCCCCccccccccCCCceeeEEecCCc
Confidence               234788899999999999999999887554   4567777777766666 556664   444456789999999996


Q ss_pred             CC--CCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEE
Q psy8774         211 AG--RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVA  288 (427)
Q Consensus       211 ~~--~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~  288 (427)
                      ..  +|.+.+|.|.......  ....    .                        ...+.....+.+|.+|.++..|.|+
T Consensus       774 ~d~~ng~~qg~ki~~~~~e~--tr~h----~------------------------n~t~~a~~~sv~i~~l~~g~ay~vt  823 (1281)
T KOG4222|consen  774 ADVQNGILQGYKIECSGGEK--TRIH----I------------------------NKTTNARTGSVTIGNLVTGIAYSVT  823 (1281)
T ss_pred             ccccCCcccceeEEeecCcc--cccc----c------------------------cccccCCCCceEeccccccceEEEE
Confidence            43  6899999998765421  1111    0                        1123356678999999999999999


Q ss_pred             EEEEeccCCCCCccceEEee
Q psy8774         289 VAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       289 V~a~~~~G~g~~s~~~~~~t  308 (427)
                      |.+.+.+|.|..+.+..+.+
T Consensus       824 v~a~T~aGvG~~s~p~~~~~  843 (1281)
T KOG4222|consen  824 VAARTGAGVGVKSPPQPIVF  843 (1281)
T ss_pred             EeeecCCccCCCCCCeeeec
Confidence            99999999999887766553

>KOG4222|consensus

Probab=99.56  E-value=1e-13  Score=137.63  Aligned_cols=312  Identities=18%  Similarity=0.169  Sum_probs=204.0

Q ss_pred             ceEEEcCCCCCceEEEEEEEEeccCcCcccce------------EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCC
Q psy8774          48 MSFLITNLERGVEYEFRIAGQNHIGYGQETVR------------YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRT  115 (427)
Q Consensus        48 ~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~------------~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~  115 (427)
                      .+..+.+|.-...|.+...+.+..|++..+..            ........-+.+|....+..++.++++|+|.+... 
T Consensus       474 ~~l~i~dl~~~DtG~YTc~as~~~ges~wSatl~v~~~~~s~q~~r~~D~S~~pS~p~~p~v~~v~~~~v~LsW~~~s~-  552 (1281)
T KOG4222|consen  474 GSLRIRDLKGPDTGRYTCIASDESGESTWSATLTVEKAGSSQQFCRCEDPSALPSPPGTPGVVNVSRTSVTLSWQPTSP-  552 (1281)
T ss_pred             ceeeeeeeecCCCcceeeeccCcccccccceeeEhhhcCcccccccCCChhhCCCCCCCCccccCCCceEEecccCCCC-
Confidence            45566677777778888888888887654321            11111112223455567778899999999999863 


Q ss_pred             CCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE-EEccc-ccC-----
Q psy8774         116 HRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS-LMTAR-DMV-----  186 (427)
Q Consensus       116 ~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~-~~t~~-~~p-----  186 (427)
                      ....++.+|.+++-.......|....  +..+.+.|.+|.|.+.|.|.|+|.|..|.+..+.... +++.. +..     
T Consensus       553 sg~vP~s~yiieafs~~~~etw~~ta~~v~~t~~~I~gL~P~~sylf~vRa~n~~Gis~Ps~~S~~vrta~a~~~~a~ad  632 (1281)
T KOG4222|consen  553 SGAVPASGYIIEAFSPDLGETWQTTAGRVKTTTYAIRGLKPNLSYLFLVRAENEQGISDPSTSSDPVRTAPADAAAAGAD  632 (1281)
T ss_pred             CCccccchhHHHHhhhhhcccccccccccccceeeecCcCccceeeeeeeccccccccCCcccCCccccCCCChhhhhhh
Confidence            34568899999876654455555443  5688999999999999999999999999875543322 23311 110     


Q ss_pred             --------C--CCCceEEEeeeCcEEEEEeeeCCCC-CCceeEEEEEEEecccccccccccccccccccccceeEEeeec
Q psy8774         187 --------R--APLGVKALATSDQSVEVWWKPVPAG-RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMT  255 (427)
Q Consensus       187 --------~--~p~~l~~~~~~~~si~v~W~~p~~~-~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (427)
                              .  .........++.+++.+.|.....+ .+.|.+|+|.|+.... ....|..                   
T Consensus       633 ~~k~~~~ls~~l~~l~~~~~L~asslr~~w~~~kq~~~~~i~g~~I~~r~~~~-~~a~~s~-------------------  692 (1281)
T KOG4222|consen  633 HQKVQRELSNELLRLSNPNVLNASSLRLGWTKDKQHGSQYIQGYRISYRSLGS-QLAQWSN-------------------  692 (1281)
T ss_pred             HHHHHHhhcccceeeccccccchhheeeeeeeecccCcccccceEEEeccCcc-ccccccc-------------------
Confidence                    0  0011123345678999999988854 3689999999998744 2333310                   


Q ss_pred             cccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC---CCCCccceEEee---cCCCCCcceE---EeecCCCe
Q psy8774         256 AVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG---LGRLSGKVTVKV---KPEDVPLSLR---AHDVSTHS  326 (427)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G---~g~~s~~~~~~t---~~~~~P~~l~---~~~~~~~~  326 (427)
                              .........++.+.+|.|++.|.|.++-+...|   .|..|....+.|   .|..+|.+++   .-..+.++
T Consensus       693 --------~~v~~~t~~s~v~~nl~p~t~ye~f~~Pf~~~~~s~~g~pS~sk~alt~e~~PSapp~~~~~~s~~~~n~Ta  764 (1281)
T KOG4222|consen  693 --------AGVTVPTPESVVVPNLKPGTNYEFFVRPFFPHGYSIQGAPSNSKTALTLEEPPSAPPQGVQHVSKGSYNGTA  764 (1281)
T ss_pred             --------cceeccCCcceeccccCCCccceeeccCccCCCcceecCCcccccccccccCCCCCCCCccccccccCCCce
Confidence                    122344566888999999999999999998865   455555555544   3556677743   33457899


Q ss_pred             EEEEecCCCc--CCCc--eEEEEEeheeecceee-eeeE---EEEeecccccccceEEEEEeecccCCCC
Q psy8774         327 MTLSWSPPIK--LNPV--KYKEVSEKIQERRLQK-YGQY---RYFETRDESYIGKRVERMEVRGRKGRGR  388 (427)
Q Consensus       327 v~l~W~~P~~--~~g~--~Y~i~~~~~~~~~l~~-~t~y---~~~~~~~~~~~~~~~~~v~a~~~~g~g~  388 (427)
                      ..|+|.+|..  -||+  +|.|..-..+...... .+.-   .=..+..+-....|.|++.+.|.+|.|.
T Consensus       765 ~~Vsw~~pp~d~~ng~~qg~ki~~~~~e~tr~h~n~t~~a~~~sv~i~~l~~g~ay~vtv~a~T~aGvG~  834 (1281)
T KOG4222|consen  765 GSVSWAPPPADVQNGILQGYKIECSGGEKTRIHINKTTNARTGSVTIGNLVTGIAYSVTVAARTGAGVGV  834 (1281)
T ss_pred             eeEEecCCcccccCCcccceeEEeecCccccccccccccCCCCceEeccccccceEEEEEeeecCCccCC
Confidence            9999998854  3443  8998754333111110 0000   0012344566777899999999999997

>KOG4258|consensus

Probab=99.55  E-value=1.9e-13  Score=131.82  Aligned_cols=290  Identities=16%  Similarity=0.220  Sum_probs=181.5

Q ss_pred             eeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccC-------------CCceEEEee----------eeeEEEEc
Q psy8774          94 NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID-------------ANNVIHRNT----------TQTKAVFS  150 (427)
Q Consensus        94 ~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~-------------~~~~~~~~~----------~~~~~~i~  150 (427)
                      ++.....+.+++.++|......+.. ...+|.+.|++...             ...|....+          ...-+.+.
T Consensus       493 ~~~~~~~~~dsi~lrW~~~~~~d~r-~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~~~~~l~  571 (1025)
T KOG4258|consen  493 QFSSTVTSADSILLRWERYQPPDMR-DLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTHPGFLLD  571 (1025)
T ss_pred             eeeeEEeecceeEEEecccCCcchh-hhheeeEeeccCCccccceecCccccccCcceEEeccCCcCCCccccccceehh
Confidence            4455567889999999977544333 56799999987531             111222211          12356889


Q ss_pred             cCCCCcEEEEEEEEeeC--CCCC--CCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEec
Q psy8774         151 NLEEGIEYSAEVQAITK--AGPG--PWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMT  226 (427)
Q Consensus       151 ~L~p~t~Y~~~V~a~~~--~g~~--~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~  226 (427)
                      +|+|+|+|.+.|++..-  .+..  ..|+...++|..+.|.+|..+-.....++.|.|+|.+|..+||.++.|.|.|...
T Consensus       572 ~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~PspPl~~ls~snsSsqi~l~W~pP~~pNG~lt~Ylv~wer~  651 (1025)
T KOG4258|consen  572 GLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSPPLDVLSKSNSSSQILLKWKPPSQPNGNLTHYLVVWERQ  651 (1025)
T ss_pred             cCCccceeEEEEeeeehhhhccccccccceEEEEecCCCCCCcchhhhccCcchheeEEecCCCCCCCceeEEEEEEEec
Confidence            99999999999999732  2221  4688899999999999999888877777899999999999999999999998876


Q ss_pred             ccccccccccccccccc-----------------------------------------------------cccceeEEee
Q psy8774         227 AVEDLDEWSQKSIPLTE-----------------------------------------------------SSNIARIFYT  253 (427)
Q Consensus       227 ~~~~~~~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~  253 (427)
                      ........  ++.+..+                                                     +..+.+.++.
T Consensus       652 ~~~~yl~~--~nYC~~~~k~p~~~~~p~~~~ed~d~~~e~e~~~~~Cc~c~~~~~~~~~e~eea~~~~~FEd~L~n~i~v  729 (1025)
T KOG4258|consen  652 AEDGYLEQ--RNYCHKGLKLPIRADLPSFDSEDMDPLLEMEGHTGPCCSCPPTESYPQYEDEEASEQKTFEDFLHNAIFV  729 (1025)
T ss_pred             cCCchHHH--hccccccccccccccCCCCchhhcchhhhhccCCCCCCCCCcccccCchhhHHHHHHHHHhhhccceeee
Confidence            42111100  0000000                                                     0000011111


Q ss_pred             e-------ccc--------------------------ccccccc-ccccCCCCceeccCCCCCCeEEEEEEEEeccCC--
Q psy8774         254 M-------TAV--------------------------EDLDEWS-QKSVPLTESAELTSLEKFTEYAVAVAARTVNGL--  297 (427)
Q Consensus       254 ~-------~~~--------------------------~~~~~~~-~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~--  297 (427)
                      .       ..+                          .+...-. .....+..++.+++|++++.|.+.+.|+|..+.  
T Consensus       730 pr~~~~krk~l~~~~n~t~~~~~~~~~~p~t~~~t~p~ei~e~~p~~~n~n~~~~vi~~Lrh~tlY~i~l~aCnh~~~~~  809 (1025)
T KOG4258|consen  730 PRRPDRKRKSLDDVENCTRLAPTRKAEEPTTPPTTAPTEIEEPKPRLENGNKESYVISGLRHFTLYRIDLQACNHATPKC  809 (1025)
T ss_pred             cccCcccccccccccceeeccccccccCCCCCCCCCCccccccCcccccccchhhhhhccccchhhhhhHhhhccccccc
Confidence            0       000                          0000000 000245567889999999999999999998764  


Q ss_pred             --CCCccceEEeec----CCCCCcceEEeec-CCCeEEEEecCCCcCCCc--eEEEEEeheee-ccee-----eeeeEEE
Q psy8774         298 --GRLSGKVTVKVK----PEDVPLSLRAHDV-STHSMTLSWSPPIKLNPV--KYKEVSEKIQE-RRLQ-----KYGQYRY  362 (427)
Q Consensus       298 --g~~s~~~~~~t~----~~~~P~~l~~~~~-~~~~v~l~W~~P~~~~g~--~Y~i~~~~~~~-~~l~-----~~t~y~~  362 (427)
                        |..+. +..+|.    ..+.|..+..... +.+++.|+|.+|.++||+  .|.|.++.... ....     .+.++..
T Consensus       810 ~cS~a~~-v~~RT~~~~~aD~i~g~v~we~~~~~~~v~l~w~EP~~pNGli~~Y~Vk~r~~~~et~v~cvsR~~~~k~~g  888 (1025)
T KOG4258|consen  810 GCSHAAF-VFARTMPTMGADDIPGPVTWECHIEMNSVILRWLEPKEPNGLILNYEVKYRRNGDETHVECVSRMDYAKAGG  888 (1025)
T ss_pred             ccchhhh-hhhccccccccccCCCceeEecccCcceEEEecCCCCCCCccEEEEEEEEeeccCcchhhhhhhhhhhhcCc
Confidence              22222 333332    2344555555544 789999999999999995  99998873221 1111     1122211


Q ss_pred             EeecccccccceEEEEEeecccCCCC
Q psy8774         363 FETRDESYIGKRVERMEVRGRKGRGR  388 (427)
Q Consensus       363 ~~~~~~~~~~~~~~~v~a~~~~g~g~  388 (427)
                      -... ...-+.|..+|||.+-+|.|+
T Consensus       889 v~l~-~l~~G~y~~~vratSlaGng~  913 (1025)
T KOG4258|consen  889 VYLK-RLNPGNYSVRVRATSLAGNGS  913 (1025)
T ss_pred             eEEE-ecCCCcEEEEEEEEeeccCCC
Confidence            1111 123456789999999999997

>KOG4258|consensus

Probab=99.41  E-value=6.8e-12  Score=121.29  Aligned_cols=271  Identities=20%  Similarity=0.272  Sum_probs=175.7

Q ss_pred             CccceEEEEEeeCCCCC-CCcceEeEEEEEEec--------------CccceeEe---e------cCcceEEEcCCCCCc
Q psy8774           4 EEPEVTIELVWSQPTQT-YGEILGYRVKYGVRE--------------HTLKENLV---N------SKNMSFLITNLERGV   59 (427)
Q Consensus         4 ~~~~~sv~l~W~~p~~~-~~~i~~Y~v~~~~~~--------------~~~~~~~~---~------~~~~~~~~~~L~p~t   59 (427)
                      ..+.++|.|+|..-... .-...+|.++|+..-              ...|....   +      ....-+.+.+|.|.|
T Consensus       498 ~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~~~~~l~~LkP~T  577 (1025)
T KOG4258|consen  498 VTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTHPGFLLDGLKPWT  577 (1025)
T ss_pred             EeecceeEEEecccCCcchhhhheeeEeeccCCccccceecCccccccCcceEEeccCCcCCCccccccceehhcCCccc
Confidence            35678999999875422 224678999987521              22465554   2      123467899999999


Q ss_pred             eEEEEEEEEec--cCcCc---ccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCC
Q psy8774          60 EYEFRIAGQNH--IGYGQ---ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDA  134 (427)
Q Consensus        60 ~Y~~~V~a~~~--~g~~~---~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~  134 (427)
                      +|.+.|++...  .+...   +....++|....|. +|..+-..+.++..|.|.|++|  ..+||.+..|.|.|......
T Consensus       578 qYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~Ps-pPl~~ls~snsSsqi~l~W~pP--~~pNG~lt~Ylv~wer~~~~  654 (1025)
T KOG4258|consen  578 QYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPS-PPLDVLSKSNSSSQILLKWKPP--SQPNGNLTHYLVVWERQAED  654 (1025)
T ss_pred             eeEEEEeeeehhhhccccccccceEEEEecCCCCC-CcchhhhccCcchheeEEecCC--CCCCCceeEEEEEEEeccCC
Confidence            99999999843  22222   23456788887774 5655555566677999999999  58889999999977542100


Q ss_pred             --------------------------CceE-------------------------------------------EEe----
Q psy8774         135 --------------------------NNVI-------------------------------------------HRN----  141 (427)
Q Consensus       135 --------------------------~~~~-------------------------------------------~~~----  141 (427)
                                                +...                                           ...    
T Consensus       655 ~yl~~~nYC~~~~k~p~~~~~p~~~~ed~d~~~e~e~~~~~Cc~c~~~~~~~~~e~eea~~~~~FEd~L~n~i~vpr~~~  734 (1025)
T KOG4258|consen  655 GYLEQRNYCHKGLKLPIRADLPSFDSEDMDPLLEMEGHTGPCCSCPPTESYPQYEDEEASEQKTFEDFLHNAIFVPRRPD  734 (1025)
T ss_pred             chHHHhccccccccccccccCCCCchhhcchhhhhccCCCCCCCCCcccccCchhhHHHHHHHHHhhhccceeeecccCc
Confidence                                      0000                                           000    


Q ss_pred             --------------------------------------------eeeeEEEEccCCCCcEEEEEEEEeeCCCC----CCC
Q psy8774         142 --------------------------------------------TTQTKAVFSNLEEGIEYSAEVQAITKAGP----GPW  173 (427)
Q Consensus       142 --------------------------------------------~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~----~~~  173 (427)
                                                                  ...+++.|.+|..++.|.+.+.|.|..+.    + .
T Consensus       735 ~krk~l~~~~n~t~~~~~~~~~~p~t~~~t~p~ei~e~~p~~~n~n~~~~vi~~Lrh~tlY~i~l~aCnh~~~~~~cS-~  813 (1025)
T KOG4258|consen  735 RKRKSLDDVENCTRLAPTRKAEEPTTPPTTAPTEIEEPKPRLENGNKESYVISGLRHFTLYRIDLQACNHATPKCGCS-H  813 (1025)
T ss_pred             ccccccccccceeeccccccccCCCCCCCCCCccccccCcccccccchhhhhhccccchhhhhhHhhhcccccccccc-h
Confidence                                                        00124567789999999999999988665    3 1


Q ss_pred             CCCeEEEcc-c-ccCCCCCceEEEee-eCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeE
Q psy8774         174 SPKLSLMTA-R-DMVRAPLGVKALAT-SDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI  250 (427)
Q Consensus       174 s~~~~~~t~-~-~~p~~p~~l~~~~~-~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (427)
                      ...+..+|. . +.-.-|..+.-... ..+++.|+|.+|+.+||.+..|.|.|+...........               
T Consensus       814 a~~v~~RT~~~~~aD~i~g~v~we~~~~~~~v~l~w~EP~~pNGli~~Y~Vk~r~~~~et~v~cv---------------  878 (1025)
T KOG4258|consen  814 AAFVFARTMPTMGADDIPGPVTWECHIEMNSVILRWLEPKEPNGLILNYEVKYRRNGDETHVECV---------------  878 (1025)
T ss_pred             hhhhhhccccccccccCCCceeEecccCcceEEEecCCCCCCCccEEEEEEEEeeccCcchhhhh---------------
Confidence            222223331 1 11011222222222 67899999999999999999999999977433222210               


Q ss_pred             EeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEe
Q psy8774         251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK  307 (427)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~  307 (427)
                                   ..........+.|..|.|| .|.++|+|...+|.|++.+...+-
T Consensus       879 -------------sR~~~~k~~gv~l~~l~~G-~y~~~vratSlaGng~~t~~~~~~  921 (1025)
T KOG4258|consen  879 -------------SRMDYAKAGGVYLKRLNPG-NYSVRVRATSLAGNGSWTESVIFY  921 (1025)
T ss_pred             -------------hhhhhhhcCceEEEecCCC-cEEEEEEEEeeccCCCCcCCcceE
Confidence                         1111223446678889887 699999999999999988754443

>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []

Probab=99.29  E-value=1.9e-11  Score=89.55  Aligned_cols=85  Identities=29%  Similarity=0.344  Sum_probs=69.1

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      ++|.++++...+.+++.|+|+++...++.+.+|.|+|..........                              ...
T Consensus         1 s~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~------------------------------~~~   50 (85)
T PF00041_consen    1 SAPENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDWQ------------------------------EVT   50 (85)
T ss_dssp             SSSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSSEEE------------------------------EEE
T ss_pred             CcCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccceeee------------------------------eee
Confidence            37899999999999999999999756689999999998874332111                              123


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCc
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS  301 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s  301 (427)
                      .......++|.+|.|++.|.|+|+|.+..|.|++|
T Consensus        51 ~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~g~g~~S   85 (85)
T PF00041_consen   51 VPGNETSYTITGLQPGTTYEFRVRAVNSDGEGPPS   85 (85)
T ss_dssp             EETTSSEEEEESCCTTSEEEEEEEEEETTEEEEEE
T ss_pred             eeeeeeeeeeccCCCCCEEEEEEEEEeCCcCcCCC
Confidence            34456689999999999999999999999988765

They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....

>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []

Probab=99.20  E-value=1.5e-10  Score=84.68  Aligned_cols=81  Identities=27%  Similarity=0.502  Sum_probs=67.3

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      +|.++++...+.+++.|+|+++.  ..++.+.+|.|+|+............  ...+.+.|.+|.|++.|.|+|+|.+..
T Consensus         2 ~P~~l~v~~~~~~sv~v~W~~~~--~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~   79 (85)
T PF00041_consen    2 APENLSVSNISPTSVTVSWKPPS--SGNGPITGYRVEYRSVNSTSDWQEVTVPGNETSYTITGLQPGTTYEFRVRAVNSD   79 (85)
T ss_dssp             SSEEEEEEEECSSEEEEEEEESS--STSSSESEEEEEEEETTSSSEEEEEEEETTSSEEEEESCCTTSEEEEEEEEEETT
T ss_pred             cCcCeEEEECCCCEEEEEEECCC--CCCCCeeEEEEEEEecccceeeeeeeeeeeeeeeeeccCCCCCEEEEEEEEEeCC
Confidence            58899999999999999999995  56679999999999885554233332  346689999999999999999999999


Q ss_pred             CCCCC
Q psy8774         169 GPGPW  173 (427)
Q Consensus       169 g~~~~  173 (427)
                      |.|++
T Consensus        80 g~g~~   84 (85)
T PF00041_consen   80 GEGPP   84 (85)
T ss_dssp             EEEEE
T ss_pred             cCcCC
Confidence            87754

They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....

>KOG4802|consensus

Probab=98.85  E-value=5.9e-08  Score=86.89  Aligned_cols=129  Identities=19%  Similarity=0.230  Sum_probs=90.4

Q ss_pred             eeEEEEccCCCCcEEEEEEEEeeCCCCCCC---CCCeEEEcccccCCCCCceEEEeeeCc---EEEEEeeeCCCCCCcee
Q psy8774         144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPW---SPKLSLMTARDMVRAPLGVKALATSDQ---SVEVWWKPVPAGRGKIL  217 (427)
Q Consensus       144 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~---s~~~~~~t~~~~p~~p~~l~~~~~~~~---si~v~W~~p~~~~g~i~  217 (427)
                      .+.+.+.++.||.-|.|+|.|+|..|.-.+   |.+....-...+|.+|.++++..+..+   ...|-|.|++ .+-++.
T Consensus       208 e~~~~~t~~rPgRwyefrvaavn~~G~rGFs~PSkpf~ssk~pkaPp~P~dl~l~~v~~dG~~~~~v~w~P~~-sdlPv~  286 (516)
T KOG4802|consen  208 ENTYIFTDMRPGRWYEFRVAAVNAYGFRGFSEPSKPFPSSKNPKAPPSPNDLKLIGVQFDGRYMLKVVWCPSK-SDLPVE  286 (516)
T ss_pred             CceeeeeecCcceeEEEEEeeeecccccccCCCCCCCCCCCCCCCCcCcccceeeeeeecceEEEEEEeCCCC-CCCcce
Confidence            568899999999999999999998876444   444444445566789999988776543   4567777665 667899


Q ss_pred             EEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC
Q psy8774         218 GYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL  297 (427)
Q Consensus       218 ~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~  297 (427)
                      .|+|.|.............+                           ....-.+..+.|++|.|+..|.|.|.|....|.
T Consensus       287 ~Yki~Ws~~v~s~k~~m~tk---------------------------s~~~k~thq~si~~L~Pns~Y~VevqAi~y~g~  339 (516)
T KOG4802|consen  287 KYKITWSLYVNSAKASMITK---------------------------SSYVKDTHQFSIKELLPNSSYYVEVQAISYLGS  339 (516)
T ss_pred             eeEEEeehhhhhhhhhcccc---------------------------cceeeccchhhhhhcCCCCeEEEEEEEEEeccC
Confidence            99999987642211111110                           011112234459999999999999999998886


Q ss_pred             CCC
Q psy8774         298 GRL  300 (427)
Q Consensus       298 g~~  300 (427)
                      +..
T Consensus       340 ~rL  342 (516)
T KOG4802|consen  340 RRL  342 (516)
T ss_pred             ccc
Confidence            553

>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

Probab=98.71  E-value=1.6e-07  Score=69.06  Aligned_cols=88  Identities=30%  Similarity=0.411  Sum_probs=66.6

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.++.+.....+++.|+|+++...++.+.+|.|.+....   ...+                             ...
T Consensus         2 ~~p~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~---~~~~-----------------------------~~~   49 (93)
T cd00063           2 SPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKG---SGDW-----------------------------KEV   49 (93)
T ss_pred             cCCCCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCC---CCCC-----------------------------EEe
Confidence            46777888887889999999999755567889999998763   1122                             111


Q ss_pred             cc--CCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEE
Q psy8774         267 SV--PLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV  306 (427)
Q Consensus       267 ~~--~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~  306 (427)
                      ..  .....+.+.+|.|++.|.|+|+|.+..|.|.++....+
T Consensus        50 ~~~~~~~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~   91 (93)
T cd00063          50 EVTPGSETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTV   91 (93)
T ss_pred             eccCCcccEEEEccccCCCEEEEEEEEECCCccCCCcccccc
Confidence            22  35678899999999999999999998888877664433

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.

>KOG4802|consensus

Probab=98.62  E-value=6e-07  Score=80.61  Aligned_cols=160  Identities=16%  Similarity=0.262  Sum_probs=101.1

Q ss_pred             ccceEEEEEeeCCCCCCCcceEeEEEE------------EEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEecc
Q psy8774           5 EPEVTIELVWSQPTQTYGEILGYRVKY------------GVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHI   71 (427)
Q Consensus         5 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~------------~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~   71 (427)
                      ...+++.+.|..-.    ....|.+.+            +..+...|+.+. ......+.++++.||.-|+|+|.|+|..
T Consensus       157 ~~~g~~av~w~~~~----~~~v~~~~~~vr~~w~~g~hase~~~thwQtv~~t~~e~~~~~t~~rPgRwyefrvaavn~~  232 (516)
T KOG4802|consen  157 RSRGSHAVDWKIES----SLLVYYVHVEVRSHWGRGFHASELGPTHWQTVEKTMEENTYIFTDMRPGRWYEFRVAAVNAY  232 (516)
T ss_pred             hccCceeeeeeecc----ccceeeeehhhhhhhcccccccccccccceeeeecCCCceeeeeecCcceeEEEEEeeeecc
Confidence            44566788888643    122222222            122233576665 5555689999999999999999999988


Q ss_pred             Cc---CcccceEEeCCCCCCCCCCeeeEEEeecC---CEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-----
Q psy8774          72 GY---GQETVRYYTTPEGPPTGPPANISHHFQTP---DVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-----  140 (427)
Q Consensus        72 g~---~~~~~~~~~t~~~~p~~~p~~~~~~~~~~---~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----  140 (427)
                      |.   +.++...-.+....++.+|.++++..+..   -...|-|.|+.   .+-++.+|.|.|..........+.     
T Consensus       233 G~rGFs~PSkpf~ssk~pkaPp~P~dl~l~~v~~dG~~~~~v~w~P~~---sdlPv~~Yki~Ws~~v~s~k~~m~tks~~  309 (516)
T KOG4802|consen  233 GFRGFSEPSKPFPSSKNPKAPPSPNDLKLIGVQFDGRYMLKVVWCPSK---SDLPVEKYKITWSLYVNSAKASMITKSSY  309 (516)
T ss_pred             cccccCCCCCCCCCCCCCCCCcCcccceeeeeeecceEEEEEEeCCCC---CCCcceeeEEEeehhhhhhhhhcccccce
Confidence            74   33333333333333334688888775432   23567777763   335899999999765322111111     


Q ss_pred             eeeeeEEEEccCCCCcEEEEEEEEeeCCCCC
Q psy8774         141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPG  171 (427)
Q Consensus       141 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~  171 (427)
                      ..+...+.|.+|.|+..|.|.|.|....|.+
T Consensus       310 ~k~thq~si~~L~Pns~Y~VevqAi~y~g~~  340 (516)
T KOG4802|consen  310 VKDTHQFSIKELLPNSSYYVEVQAISYLGSR  340 (516)
T ss_pred             eeccchhhhhhcCCCCeEEEEEEEEEeccCc
Confidence            1223345599999999999999999887776

>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

Probab=98.55  E-value=1.5e-06  Score=63.87  Aligned_cols=84  Identities=27%  Similarity=0.474  Sum_probs=63.1

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      +|.++.+......++.|+|+++..  .++.+.+|.|.+.... ...+....   .....+.+.+|.|++.|.|+|+|.+.
T Consensus         3 ~p~~~~~~~~~~~~~~v~W~~~~~--~~~~~~~y~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~p~~~Y~~~v~a~~~   79 (93)
T cd00063           3 PPTNLRVTDVTSTSVTLSWTPPED--DGGPITGYVVEYREKG-SGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG   79 (93)
T ss_pred             CCCCcEEEEecCCEEEEEECCCCC--CCCcceeEEEEEeeCC-CCCCEEeeccCCcccEEEEccccCCCEEEEEEEEECC
Confidence            466777777788999999999852  2256779999998763 22333332   26788999999999999999999988


Q ss_pred             CCCCCCCCCe
Q psy8774         168 AGPGPWSPKL  177 (427)
Q Consensus       168 ~g~~~~s~~~  177 (427)
                      .|.|.++...
T Consensus        80 ~~~~~~s~~~   89 (93)
T cd00063          80 GGESPPSESV   89 (93)
T ss_pred             CccCCCcccc
Confidence            7777665533

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.

>COG3401 Fibronectin type 3 domain-containing protein [General function prediction only]

Probab=98.52  E-value=1.3e-05  Score=70.97  Aligned_cols=322  Identities=11%  Similarity=0.013  Sum_probs=173.8

Q ss_pred             cceEeEEEEEEecCccceeEe---ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce-EEeCC-CCCCCCCCeeeEE
Q psy8774          23 EILGYRVKYGVREHTLKENLV---NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR-YYTTP-EGPPTGPPANISH   97 (427)
Q Consensus        23 ~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~-~~~t~-~~~p~~~p~~~~~   97 (427)
                      .+.+|.+.....+.. .....   ....+++....|.+++.|.+.....+..-.+..+.. ...+. ...    .+.+..
T Consensus         4 ~~~~~~~~~t~~~~~-~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~i~~----~~~~~~   78 (343)
T COG3401           4 DIDGFVLYRTKKDLK-LKRIGTIKNKYQTHYYDEGLEGEESYPYQEGTTKVDKISYDSERILVKTSFIER----VRSVFA   78 (343)
T ss_pred             cceeEEEEEEcccch-hhhhhccccchhhhhhhccccccCcceeeecccccceeeecCcceEEEeeeccc----cccccc
Confidence            456676655444433 22221   556788889999999999988877765532222221 12221 111    112222


Q ss_pred             EeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-eee--eeEEEEccCCCCcEEEEEEEEeeCCCCCCCC
Q psy8774          98 HFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-NTT--QTKAVFSNLEEGIEYSAEVQAITKAGPGPWS  174 (427)
Q Consensus        98 ~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~--~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s  174 (427)
                      .-..+..+.+.|.+.+.    -....|.|+....+.. ....- ..+  ...+.-.+|.++..|...|.+.+..+.-..|
T Consensus        79 ~~~~~~~~~~~w~~~~d----~~~~~Y~i~~~~gD~~-f~r~~~~~n~l~~~~i~s~~~~~~~~~~~Iia~~f~~~~sfs  153 (343)
T COG3401          79 SLERPKSVKVFWSPHPD----VSVGKYIIQRQNGDGK-FLRTGLVKNRLFVEFIDSDLGHNEKYMELIIAADFQMGKSFS  153 (343)
T ss_pred             hhcCcceeeecccccCC----CCCCeEEEEEecCchh-hhhhhHHHhccchhheecccccccceeeeEEeecccccceee
Confidence            22345679999998752    3566899987765322 11111 111  3334556899999999999999776553333


Q ss_pred             CCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeee
Q psy8774         175 PKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTM  254 (427)
Q Consensus       175 ~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (427)
                      -...-.++...|..-.++.+.....+.+.|+|+.++.    +..|.|+-....... ...                    
T Consensus       154 f~gVE~~~~~~P~ei~~~~~~~d~~~~i~ls~dg~~~----~~yy~IY~~~~g~e~-~~~--------------------  208 (343)
T COG3401         154 FTGVEATPKAEPKEITNVRVSFDLGNNIELSEDGSEA----EDYYRIYASDSGNEE-YGF--------------------  208 (343)
T ss_pred             eeeeecccccCCceeeeeeeecCCCCcceeeccCccc----cceEEEeccCCcccc-ccc--------------------
Confidence            1111122333444455556666678899999998873    338888665542211 111                    


Q ss_pred             ccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC-CCCCccceEEeecCCCCCcceEEee-cCCCeEEEEec
Q psy8774         255 TAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG-LGRLSGKVTVKVKPEDVPLSLRAHD-VSTHSMTLSWS  332 (427)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G-~g~~s~~~~~~t~~~~~P~~l~~~~-~~~~~v~l~W~  332 (427)
                               ......+.......+|  |..|...|.++...| ++..+....+......++....... .....+-|.|+
T Consensus       209 ---------ia~t~~n~y~d~~egl--ga~~~y~VTtVd~~~~es~lp~~~t~~~~~g~~e~pt~~g~t~~~s~i~V~~E  277 (343)
T COG3401         209 ---------IAQTTENSYYDVKEGL--GAVEYYKVTTVDNTGFESDLPNEPTVGETGGRYEVPTIPGETTEASFIGVAAE  277 (343)
T ss_pred             ---------eeeccccchhhhhhcc--CceeEEEEEEEcCCcceeccCCccccccccCCcccccCCCceeeeeeeeEEec
Confidence                     1111122222334455  778888899988655 6666664444422222211111111 22334457777


Q ss_pred             CCCcCCCceEEEEEeheeecceeee-eeEEEEeecccccccceEEEEEeecccCCCCcch
Q psy8774         333 PPIKLNPVKYKEVSEKIQERRLQKY-GQYRYFETRDESYIGKRVERMEVRGRKGRGRPKK  391 (427)
Q Consensus       333 ~P~~~~g~~Y~i~~~~~~~~~l~~~-t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~  391 (427)
                      .-....++.|.+..-+- .....-+ ..+.-....+......+.+.|.+...+|...+..
T Consensus       278 ~~~~~~av~ytvyr~~~-g~~~~~f~it~~d~~d~~~ltg~~~~y~v~~v~~~gls~~~~  336 (343)
T COG3401         278 QNQLRQAVTYTVYRVED-GTPTKFFTITETDGQDNDMLTGVEYRYEVVAVDKAGLSSHPS  336 (343)
T ss_pred             ccccceeeEEeeeeccC-CCcceeeeeeeccccchhhccccceeEEEEEecccccccCCc
Confidence            66545555555432111 0011111 1222223445567778888999999999887643

>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi

Probab=98.50  E-value=0.00029  Score=62.74  Aligned_cols=245  Identities=13%  Similarity=0.154  Sum_probs=123.1

Q ss_pred             ecCcceEEEcCCCCCceEEEEEEEEecc-CcCc-ccceEEeCCCCCCCCCCeee-----EEEee-cCCE-EEEEeeCCCC
Q psy8774          44 NSKNMSFLITNLERGVEYEFRIAGQNHI-GYGQ-ETVRYYTTPEGPPTGPPANI-----SHHFQ-TPDV-VCITWDPPLR  114 (427)
Q Consensus        44 ~~~~~~~~~~~L~p~t~Y~~~V~a~~~~-g~~~-~~~~~~~t~~~~p~~~p~~~-----~~~~~-~~~~-v~v~W~~p~~  114 (427)
                      ....+.++|.+|.|++.|.|.|.++|.. |.+. .......+.+...+ .|..|     ..... .... -..+...|..
T Consensus        11 vg~~t~~t~~~L~p~t~YyfdVF~vn~~~n~ssay~gt~~~t~~~~r~-~~~~Lkdg~l~~~~l~~~~g~~~f~f~vP~~   89 (300)
T PF10179_consen   11 VGQKTNQTLSGLKPDTTYYFDVFVVNQLTNNSSAYLGTFARTREENRS-KPTRLKDGKLTQVKLKGKGGFKFFSFKVPKR   89 (300)
T ss_pred             cCCCceEEeccCCCCCeEEEEEEEEECCCCceeeeeEEEEEEccccCC-CcEEcccCcEEEEEECCcCceeEEEEcCCcC
Confidence            5567899999999999999999999874 3332 22223333222111 12222     11111 1222 2334443311


Q ss_pred             CCCCcceeEEEEEEEEc-------cCCCceEEE-e-eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE-EEc---
Q psy8774         115 THRNGQIVLYNVKFHKK-------IDANNVIHR-N-TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS-LMT---  181 (427)
Q Consensus       115 ~~~~~~i~~Y~v~~~~~-------~~~~~~~~~-~-~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~-~~t---  181 (427)
                      ...+..+ .+.|.-+..       ..+...... . ..-..+.+.++.||..|.+++.+.+... +.....+. ..+   
T Consensus        90 ~~~~~~~-~l~v~~C~G~V~v~i~r~gk~l~~~~~v~~~~~f~l~~~~~g~~Yliri~~~~~~e-~~~~~kV~aast~~~  167 (300)
T PF10179_consen   90 SSTHQSL-WLFVQSCSGSVRVEISRNGKILLSQKNVEGLRHFRLSGVKPGERYLIRIQISNSDE-GPSTFKVQAASTNPS  167 (300)
T ss_pred             CCCCccE-EEEEEeCCCeEEEEEEECCeEEeeeecccceEEEEECCCCCCCeEEEEEEccCCCC-CceEEEEEEecCCcc
Confidence            1111112 122221111       002111111 1 2357789999999999999998776432 22232333 233   


Q ss_pred             ccccCCCCCceEEEeee----CcEEEEEeeeCCCCCCceeEEEEEEEecccc-cc-ccccccccccccccccee--EEee
Q psy8774         182 ARDMVRAPLGVKALATS----DQSVEVWWKPVPAGRGKILGYQIFYTMTAVE-DL-DEWSQKSIPLTESSNIAR--IFYT  253 (427)
Q Consensus       182 ~~~~p~~p~~l~~~~~~----~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~--~~~~  253 (427)
                      ...-|.-|.+..+...+    -++++|.|.+..+.  . ..|=|+.+..... .. ......+.|.+.++....  ....
T Consensus       168 ~~~~P~LP~d~~Ik~f~~lrtC~SvTIAW~~s~d~--~-~kYCvy~~~~~~~~~~~~~~~~~n~C~~~~sr~k~e~v~Ck  244 (300)
T PF10179_consen  168 KQPYPQLPDDTSIKEFNKLRTCNSVTIAWLGSPDR--S-IKYCVYRREEHSNYQERSVSRMPNQCLGPESRKKSEKVLCK  244 (300)
T ss_pred             cCCCCCCCCCCceeEEcCCcccceEEEEEecCCCC--C-ceEEEEEEEecCchhhhhhcccCccCCCCCccccceEEEEE
Confidence            23456788888886654    47999999987631  2 5788877765332 01 111111223222111110  0000


Q ss_pred             -eccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCC
Q psy8774         254 -MTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG  298 (427)
Q Consensus       254 -~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g  298 (427)
                       ....+.    .......-...+|.+|+||+.|.|.|.+.-..|.+
T Consensus       245 ~~~~~n~----~~~~~~~v~tetI~~L~PG~~Yl~dV~~~~~~G~s  286 (300)
T PF10179_consen  245 YFHSPNS----SEDPQRAVTTETIKGLKPGTTYLFDVYVNGPSGQS  286 (300)
T ss_pred             EEcCCcc----ccccccccceeecccCCCCcEEEEEEEEecCCCce
Confidence             000000    00011122355799999999999999998766543

The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.

>smart00060 FN3 Fibronectin type 3 domain

Probab=98.31  E-value=6.4e-06  Score=58.68  Aligned_cols=80  Identities=28%  Similarity=0.419  Sum_probs=54.2

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.++.+.....+++.|+|+++....+  .+|.+.|..........+                             ...
T Consensus         2 ~~p~~~~~~~~~~~~~~v~W~~~~~~~~--~~y~~~~~~~~~~~~~~~-----------------------------~~~   50 (83)
T smart00060        2 SPPSNLRVTDVTSTSVTLSWEPPPDDGI--TGYIVGYRVEYREEGSSW-----------------------------KEV   50 (83)
T ss_pred             CCCCcEEEEEEeCCEEEEEECCCCCCCC--CccEEEEEEEEecCCCcc-----------------------------EEE
Confidence            3455678877778899999997763322  778888776532211111                             111


Q ss_pred             c-cCCCCceeccCCCCCCeEEEEEEEEeccCC
Q psy8774         267 S-VPLTESAELTSLEKFTEYAVAVAARTVNGL  297 (427)
Q Consensus       267 ~-~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~  297 (427)
                      . ......+.+.+|.|++.|.|+|+|.+..|.
T Consensus        51 ~~~~~~~~~~i~~L~~~~~Y~v~v~a~~~~g~   82 (83)
T smart00060       51 NVTPSSTSYTLTGLKPGTEYEFRVRAVNGAGE   82 (83)
T ss_pred             EecCCccEEEEeCcCCCCEEEEEEEEEcccCC
Confidence            1 122568899999999999999999987553

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

>KOG3632|consensus

Probab=98.23  E-value=3.9e-06  Score=83.24  Aligned_cols=206  Identities=17%  Similarity=0.216  Sum_probs=134.5

Q ss_pred             ccceEEEEEeeCCC--CCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCC-CCceEEEEEEEEeccCcCcccceEE
Q psy8774           5 EPEVTIELVWSQPT--QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLE-RGVEYEFRIAGQNHIGYGQETVRYY   81 (427)
Q Consensus         5 ~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~-p~t~Y~~~V~a~~~~g~~~~~~~~~   81 (427)
                      ....++.|-|++|.  ...+++..|.+..-..   ........+.+...+..|. .+..|.+.|.+..+.|.+.......
T Consensus       589 qla~sv~vawepps~pP~~~~~~~~~~~v~~e---lrq~l~~gs~tka~~E~ld~~a~s~~isvq~ltSrGsqd~lrc~L  665 (1335)
T KOG3632|consen  589 QLAGSVHVAWEPPSSPPFTAPARMIGATVLME---LRQTLYAGSLTKAMQESLDNSAHSGYISVQRLTSRGSQDQLRCIL  665 (1335)
T ss_pred             hhccceeeeccCCCCCCccccceeeeeecchh---hhhhcccccchHHHHhhccccCCceeeehhhhhccCCCCcceeeE
Confidence            35678999999976  2344566677653221   1111112333333333432 2445778888888888877665555


Q ss_pred             eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEE
Q psy8774          82 TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAE  161 (427)
Q Consensus        82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~  161 (427)
                      -+...++ ..|.++++...+.++..++|-+...     ..  -.+.|...   ............+.|.+|.|++.|.++
T Consensus       666 lvgg~a~-vvpsqlrv~n~tqtSa~itwvp~ns-----n~--~Hviyln~---eE~~ps~a~~y~ytf~~lrpgt~y~a~  734 (1335)
T KOG3632|consen  666 LVGGAAP-VVPSQLRVWNATQTSAMITWVPFNS-----NF--LHVIYLNA---EEPRPSVAEMYNYTFMRLRPGTDYWAS  734 (1335)
T ss_pred             ecccccc-ccchhhhhhhhhchhhheeeeecCC-----Cc--ceeeecCC---ccCCCchhhhhHHHHhccCCCCcccee
Confidence            5555555 5689999999999999999987731     11  12233322   112222233556788899999999999


Q ss_pred             EEEeeCC-C--------CCCCCCCeEEEc-ccccCCCCCceEEEee-eCcEEEEEeeeCCCC-----CC-ceeEEEEEEE
Q psy8774         162 VQAITKA-G--------PGPWSPKLSLMT-ARDMVRAPLGVKALAT-SDQSVEVWWKPVPAG-----RG-KILGYQIFYT  224 (427)
Q Consensus       162 V~a~~~~-g--------~~~~s~~~~~~t-~~~~p~~p~~l~~~~~-~~~si~v~W~~p~~~-----~g-~i~~Y~I~~~  224 (427)
                      |-+.-.. +        .+.....+.|+| .+++|.+|.++++..- ....+.++|.+|...     || .+++|.|+..
T Consensus       735 vea~~p~q~pwdl~~v~~etr~atv~f~tLpAGppappldV~vE~g~spg~l~vswrPptldsag~sngv~vtgYavyad  814 (1335)
T KOG3632|consen  735 VEAALPRQEPWDLRMVPMETRQATVLFRTLPAGPPAPPLDVKVETGGSPGRLEVSWRPPTLDSAGCSNGVAVTGYAVYAD  814 (1335)
T ss_pred             cccccCcCCCcccccchhhhhccceeeecccCCCCCCchheeeecCCCCceeeeeccCceeccccccCceeeeeeeeeeC
Confidence            9887541 1        122355677877 7788999999998774 467899999998753     33 7899999765

>KOG3632|consensus

Probab=98.08  E-value=1.7e-05  Score=78.85  Aligned_cols=219  Identities=18%  Similarity=0.227  Sum_probs=138.6

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCC-CCcEEEEEEEEeeCCCC
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLE-EGIEYSAEVQAITKAGP  170 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~-p~t~Y~~~V~a~~~~g~  170 (427)
                      |+.+.+......++.|.|++|...-..+....|.+.....   -.......+.+...+..|. ....|.+.|.+..+.|.
T Consensus       581 pr~~~~vkqla~sv~vawepps~pP~~~~~~~~~~~v~~e---lrq~l~~gs~tka~~E~ld~~a~s~~isvq~ltSrGs  657 (1335)
T KOG3632|consen  581 PRTGAAVKQLAGSVHVAWEPPSSPPFTAPARMIGATVLME---LRQTLYAGSLTKAMQESLDNSAHSGYISVQRLTSRGS  657 (1335)
T ss_pred             ccchhhhhhhccceeeeccCCCCCCccccceeeeeecchh---hhhhcccccchHHHHhhccccCCceeeehhhhhccCC
Confidence            4455555667789999999986433344566666543211   1111122334444455553 45668889999988888


Q ss_pred             CCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeE
Q psy8774         171 GPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI  250 (427)
Q Consensus       171 ~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (427)
                      +.....+.. .....+..|.++++-+.+.++..++|-+-..   . .-..|+....      +                 
T Consensus       658 qd~lrc~Ll-vgg~a~vvpsqlrv~n~tqtSa~itwvp~ns---n-~~Hviyln~e------E-----------------  709 (1335)
T KOG3632|consen  658 QDQLRCILL-VGGAAPVVPSQLRVWNATQTSAMITWVPFNS---N-FLHVIYLNAE------E-----------------  709 (1335)
T ss_pred             CCcceeeEe-ccccccccchhhhhhhhhchhhheeeeecCC---C-cceeeecCCc------c-----------------
Confidence            755543333 3455668999999999999999999976651   1 2222322211      1                 


Q ss_pred             EeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEecc---------CCCCCccceEEeecCC---CCCcceE
Q psy8774         251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN---------GLGRLSGKVTVKVKPE---DVPLSLR  318 (427)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~---------G~g~~s~~~~~~t~~~---~~P~~l~  318 (427)
                                   ..........++|.+|.|++.|.++|-|.-..         -.+..+..+.|+|.+.   .||.+++
T Consensus       710 -------------~~ps~a~~y~ytf~~lrpgt~y~a~vea~~p~q~pwdl~~v~~etr~atv~f~tLpAGppappldV~  776 (1335)
T KOG3632|consen  710 -------------PRPSVAEMYNYTFMRLRPGTDYWASVEAALPRQEPWDLRMVPMETRQATVLFRTLPAGPPAPPLDVK  776 (1335)
T ss_pred             -------------CCCchhhhhHHHHhccCCCCccceecccccCcCCCcccccchhhhhccceeeecccCCCCCCchhee
Confidence                         11233445578899999999999999987651         1234456678887644   4566777


Q ss_pred             Eee-cCCCeEEEEecCCCc-----CCCc---eEEEEEeheeecce
Q psy8774         319 AHD-VSTHSMTLSWSPPIK-----LNPV---KYKEVSEKIQERRL  354 (427)
Q Consensus       319 ~~~-~~~~~v~l~W~~P~~-----~~g~---~Y~i~~~~~~~~~l  354 (427)
                      +.. .+.+.+.++|.||.-     .||+   +|.|+....+...+
T Consensus       777 vE~g~spg~l~vswrPptldsag~sngv~vtgYavyadgqkv~Ev  821 (1335)
T KOG3632|consen  777 VETGGSPGRLEVSWRPPTLDSAGCSNGVAVTGYAVYADGQKVEEV  821 (1335)
T ss_pred             eecCCCCceeeeeccCceeccccccCceeeeeeeeeeCCceeeee
Confidence            765 468899999999852     4553   89988664444333

>COG3401 Fibronectin type 3 domain-containing protein [General function prediction only]

Probab=98.00  E-value=0.00077  Score=59.96  Aligned_cols=244  Identities=12%  Similarity=0.060  Sum_probs=137.8

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe---ecCcceEEEcCCCCCceEEEEEEEEeccCcCccc-ceEEe
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV---NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET-VRYYT   82 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~-~~~~~   82 (427)
                      +.++.+-|.+..+  -++..|.|+....++. +....   ..-.-.+.-.+|.++..|...|.+.+..+.-..+ ...-.
T Consensus        83 ~~~~~~~w~~~~d--~~~~~Y~i~~~~gD~~-f~r~~~~~n~l~~~~i~s~~~~~~~~~~~Iia~~f~~~~sfsf~gVE~  159 (343)
T COG3401          83 PKSVKVFWSPHPD--VSVGKYIIQRQNGDGK-FLRTGLVKNRLFVEFIDSDLGHNEKYMELIIAADFQMGKSFSFTGVEA  159 (343)
T ss_pred             cceeeecccccCC--CCCCeEEEEEecCchh-hhhhhHHHhccchhheecccccccceeeeEEeecccccceeeeeeeec
Confidence            4568899999763  3677899998766655 32222   2223344556899999999999999877654433 22223


Q ss_pred             CCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEE
Q psy8774          83 TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        83 t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      +....|+. -.++++.....+.+.|+|+.+.      ....|.|+-................+.+.-.--.-|..|...|
T Consensus       160 ~~~~~P~e-i~~~~~~~d~~~~i~ls~dg~~------~~~yy~IY~~~~g~e~~~~ia~t~~n~y~d~~eglga~~~y~V  232 (343)
T COG3401         160 TPKAEPKE-ITNVRVSFDLGNNIELSEDGSE------AEDYYRIYASDSGNEEYGFIAQTTENSYYDVKEGLGAVEYYKV  232 (343)
T ss_pred             ccccCCce-eeeeeeecCCCCcceeeccCcc------ccceEEEeccCCccccccceeeccccchhhhhhccCceeEEEE
Confidence            32233321 2344455567788999999874      2227888766553333333333334444333333377888888


Q ss_pred             EEeeCCC-CCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccc
Q psy8774         163 QAITKAG-PGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPL  241 (427)
Q Consensus       163 ~a~~~~g-~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~  241 (427)
                      .++...| .+..+.........+.+..|.-..-. ...+.+.|.|+....  .....|.++-... +...          
T Consensus       233 TtVd~~~~es~lp~~~t~~~~~g~~e~pt~~g~t-~~~s~i~V~~E~~~~--~~av~ytvyr~~~-g~~~----------  298 (343)
T COG3401         233 TTVDNTGFESDLPNEPTVGETGGRYEVPTIPGET-TEASFIGVAAEQNQL--RQAVTYTVYRVED-GTPT----------  298 (343)
T ss_pred             EEEcCCcceeccCCccccccccCCcccccCCCce-eeeeeeeEEeccccc--ceeeEEeeeeccC-CCcc----------
Confidence            8887544 34445444433322222222221111 123455677776641  2345555543332 1010          


Q ss_pred             cccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC
Q psy8774         242 TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL  297 (427)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~  297 (427)
                                             .......+...+..+..+..|.+.|.+.+..|-
T Consensus       299 -----------------------~~f~it~~d~~d~~~ltg~~~~y~v~~v~~~gl  331 (343)
T COG3401         299 -----------------------KFFTITETDGQDNDMLTGVEYRYEVVAVDKAGL  331 (343)
T ss_pred             -----------------------eeeeeeeccccchhhccccceeEEEEEeccccc
Confidence                                   011122345567778889999999999998874

>smart00060 FN3 Fibronectin type 3 domain

Probab=97.97  E-value=0.00018  Score=50.89  Aligned_cols=75  Identities=25%  Similarity=0.422  Sum_probs=51.1

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEEEe--eeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      |..+.+......++.|+|+++..  .. . .+|.+.|.......  .+....  .....+.+.+|.|++.|.|+|+|.+.
T Consensus         4 p~~~~~~~~~~~~~~v~W~~~~~--~~-~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~v~v~a~~~   79 (83)
T smart00060        4 PSNLRVTDVTSTSVTLSWEPPPD--DG-I-TGYIVGYRVEYREEGSSWKEVNVTPSSTSYTLTGLKPGTEYEFRVRAVNG   79 (83)
T ss_pred             CCcEEEEEEeCCEEEEEECCCCC--CC-C-CccEEEEEEEEecCCCccEEEEecCCccEEEEeCcCCCCEEEEEEEEEcc
Confidence            44577777777799999997742  21 1 57777776543221  122222  22578999999999999999999986


Q ss_pred             CCC
Q psy8774         168 AGP  170 (427)
Q Consensus       168 ~g~  170 (427)
                      .|.
T Consensus        80 ~g~   82 (83)
T smart00060       80 AGE   82 (83)
T ss_pred             cCC
Confidence            543

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi

Probab=97.89  E-value=0.0033  Score=56.15  Aligned_cols=118  Identities=15%  Similarity=0.196  Sum_probs=73.0

Q ss_pred             CCCceeccCCCCCCeEEEEEEEEeccCCCCCccceE-EeecC-----CCCCcceEEeecC----CCeEEEEecCCCcCCC
Q psy8774         270 LTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT-VKVKP-----EDVPLSLRAHDVS----THSMTLSWSPPIKLNP  339 (427)
Q Consensus       270 ~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~-~~t~~-----~~~P~~l~~~~~~----~~~v~l~W~~P~~~~g  339 (427)
                      .-..+.+.++.||..|.+++.+.+.. ++.....+. .+|.+     +..|.++.+...+    =++++|.|.+-.+.. 
T Consensus       126 ~~~~f~l~~~~~g~~Yliri~~~~~~-e~~~~~kV~aast~~~~~~~P~LP~d~~Ik~f~~lrtC~SvTIAW~~s~d~~-  203 (300)
T PF10179_consen  126 GLRHFRLSGVKPGERYLIRIQISNSD-EGPSTFKVQAASTNPSKQPYPQLPDDTSIKEFNKLRTCNSVTIAWLGSPDRS-  203 (300)
T ss_pred             ceEEEEECCCCCCCeEEEEEEccCCC-CCceEEEEEEecCCcccCCCCCCCCCCceeEEcCCcccceEEEEEecCCCCC-
Confidence            34578899999999999999887654 444444444 33322     2346677765443    389999999866655 


Q ss_pred             ceEEEEEeheeec--------------------ceeeee-eE--------------EEEeecccccccceEEEEEeeccc
Q psy8774         340 VKYKEVSEKIQER--------------------RLQKYG-QY--------------RYFETRDESYIGKRVERMEVRGRK  384 (427)
Q Consensus       340 ~~Y~i~~~~~~~~--------------------~l~~~t-~y--------------~~~~~~~~~~~~~~~~~v~a~~~~  384 (427)
                      +.|=|...+....                    ..+... +|              ....+..|++...|.|-|.+.-..
T Consensus       204 ~kYCvy~~~~~~~~~~~~~~~~~n~C~~~~sr~k~e~v~Ck~~~~~n~~~~~~~~v~tetI~~L~PG~~Yl~dV~~~~~~  283 (300)
T PF10179_consen  204 IKYCVYRREEHSNYQERSVSRMPNQCLGPESRKKSEKVLCKYFHSPNSSEDPQRAVTTETIKGLKPGTTYLFDVYVNGPS  283 (300)
T ss_pred             ceEEEEEEEecCchhhhhhcccCccCCCCCccccceEEEEEEEcCCccccccccccceeecccCCCCcEEEEEEEEecCC
Confidence            6666654321111                    000000 11              122456688999999999888766


Q ss_pred             CCCCc
Q psy8774         385 GRGRP  389 (427)
Q Consensus       385 g~g~p  389 (427)
                      |..-|
T Consensus       284 G~sl~  288 (300)
T PF10179_consen  284 GQSLP  288 (300)
T ss_pred             Cceee
Confidence            65544

The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.

>KOG4367|consensus

Probab=97.56  E-value=0.0001  Score=66.86  Aligned_cols=83  Identities=19%  Similarity=0.239  Sum_probs=69.3

Q ss_pred             eecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE
Q psy8774          99 FQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS  178 (427)
Q Consensus        99 ~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~  178 (427)
                      ...+++++|+|..|+  ....+.+||.++.....++.......+..+-+++.+|.-++.|..+|.++|+.|.+++|+.+.
T Consensus       449 ~t~nns~t~~wkqp~--~~~~~~dg~~leld~g~~g~frevy~g~etmctvdglhfns~y~arvka~n~tg~s~ys~tl~  526 (699)
T KOG4367|consen  449 CTHNNSATLSWKQPP--LSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLV  526 (699)
T ss_pred             hccCCceEEEeecCC--CCCCCCcceEEEeecCCCCceeEEEecCceeEEecceecchhHHHHHHHhhccCCCcccceeE
Confidence            356789999999774  333578899999988755555556667799999999999999999999999999999999998


Q ss_pred             EEccc
Q psy8774         179 LMTAR  183 (427)
Q Consensus       179 ~~t~~  183 (427)
                      ..|.+
T Consensus       527 lqts~  531 (699)
T KOG4367|consen  527 LQTSE  531 (699)
T ss_pred             eeecc
Confidence            88844

>KOG4152|consensus

Probab=97.46  E-value=0.0005  Score=64.25  Aligned_cols=77  Identities=30%  Similarity=0.493  Sum_probs=61.6

Q ss_pred             EccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCC-CCceeEEEEEEEec
Q psy8774         149 FSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAG-RGKILGYQIFYTMT  226 (427)
Q Consensus       149 i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~-~g~i~~Y~I~~~~~  226 (427)
                      -..|.+|+.|+|+|.|.|..|.|++|....+.| ..+-|..|..++... +-..+.+.|++|..+ .|.|..|..+....
T Consensus       651 k~~lv~Gq~yrfrV~aIng~G~gp~s~i~~~kTc~pG~P~apS~~ri~k-~~eGi~l~weppt~p~sg~Iieys~ylAi~  729 (830)
T KOG4152|consen  651 KTSLVTGQAYRFRVTAINGKGPGPASTILKLKTCAPGKPTAPSGARIKK-TIEGISLVWEPPTKPGSGTIIEYSPYLAII  729 (830)
T ss_pred             ccccccccceeeeeeeeeccCCCchhhheeeeeccCCCCCCcccccccc-cccceeecccCCCCCCCcceEEeehhhHhh
Confidence            346899999999999999999999999999988 555667777776654 456799999999876 36777787765443

>KOG4152|consensus

Probab=97.38  E-value=0.0012  Score=61.71  Aligned_cols=118  Identities=24%  Similarity=0.319  Sum_probs=75.6

Q ss_pred             cCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCC---CCcceEEeecCCCeEEEEecCCCcCCC---ceEEEEEe---
Q psy8774         277 TSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED---VPLSLRAHDVSTHSMTLSWSPPIKLNP---VKYKEVSE---  347 (427)
Q Consensus       277 ~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~---~P~~l~~~~~~~~~v~l~W~~P~~~~g---~~Y~i~~~---  347 (427)
                      ..|.+|+.|.|+|.|.|..|.|++|....+.|-.++   +|..+++. -+-.-+.|.|.+|..++.   +.|..+..   
T Consensus       652 ~~lv~Gq~yrfrV~aIng~G~gp~s~i~~~kTc~pG~P~apS~~ri~-k~~eGi~l~weppt~p~sg~Iieys~ylAi~t  730 (830)
T KOG4152|consen  652 TSLVTGQAYRFRVTAINGKGPGPASTILKLKTCAPGKPTAPSGARIK-KTIEGISLVWEPPTKPGSGTIIEYSPYLAIIT  730 (830)
T ss_pred             cccccccceeeeeeeeeccCCCchhhheeeeeccCCCCCCccccccc-ccccceeecccCCCCCCCcceEEeehhhHhhh
Confidence            478999999999999999999999999999885443   44455544 345578999999987642   35655422   


Q ss_pred             ---heeecceeeeeeEE-------------EEeecccccccceEEEEEeecccCCCCcc-hhhhH
Q psy8774         348 ---KIQERRLQKYGQYR-------------YFETRDESYIGKRVERMEVRGRKGRGRPK-KRWMD  395 (427)
Q Consensus       348 ---~~~~~~l~~~t~y~-------------~~~~~~~~~~~~~~~~v~a~~~~g~g~p~-~~~~~  395 (427)
                         .-...+|--...|+             .....+.......+|||.|.|..|.|+-- ..|++
T Consensus       731 q~~~~~~sql~fmr~ycg~~t~c~vt~g~l~tA~~d~t~~paivfri~aknekGyGpatqvrwlq  795 (830)
T KOG4152|consen  731 QAGATGVSQLPFMRSYCGIITTCVVTSGKLITAVPDITTGPAIVFRIVAKNEKGYGPATQVRWLQ  795 (830)
T ss_pred             hhhccCccccceeeeecccceeeEEecccceeeccccccCcceEEEEEecCCCCCCcceEEEecc
Confidence               01111221111221             00111222333459999999999999753 55665

>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology

Probab=97.35  E-value=0.0017  Score=49.23  Aligned_cols=90  Identities=23%  Similarity=0.367  Sum_probs=55.9

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCC----CCCCc------ceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEE
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLR----THRNG------QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYS  159 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~----~~~~~------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~  159 (427)
                      +||. +.+ ....+.+.|.+.+|..    ...+.      .-..|.|.++.................+.|.+|.|++.|.
T Consensus         4 gPP~-v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~YC   81 (106)
T PF09294_consen    4 GPPS-VNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSNEKKKEIETKNSSVTLSDLKPGTNYC   81 (106)
T ss_dssp             -SSE-EEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTSCEEEEEESSSEEEEEES--TTSEEE
T ss_pred             cCCE-EEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCccceEEEeecCCEEEEeCCCCCCCEE
Confidence            3564 776 5577899999998840    01110      1246999999884442344444557778999999999999


Q ss_pred             EEEEEeeC--CCCCCCCCCeEEEc
Q psy8774         160 AEVQAITK--AGPGPWSPKLSLMT  181 (427)
Q Consensus       160 ~~V~a~~~--~g~~~~s~~~~~~t  181 (427)
                      |+|.+...  ...|.+|....+.|
T Consensus        82 v~V~~~~~~~~~~s~~S~~~C~~t  105 (106)
T PF09294_consen   82 VSVQAFSPSQNKNSQPSEPQCITT  105 (106)
T ss_dssp             EEEEEEECSSTEEEEEBSEEEEE-
T ss_pred             EEEEEEeccCCCcCCCCCCEeEeC
Confidence            99999332  22345666655543

They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....

>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology

Probab=97.21  E-value=0.0018  Score=49.15  Aligned_cols=87  Identities=23%  Similarity=0.263  Sum_probs=55.4

Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCC-----CCC-------ceeEEEEEEEecccccccccccccccccccccceeEEeeec
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPA-----GRG-------KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMT  255 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~-----~~g-------~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (427)
                      ||. +.+ ...+++|.|.+.+|..     ...       ....|.|.|+.....   ..                     
T Consensus         5 PP~-v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~---~~---------------------   58 (106)
T PF09294_consen    5 PPS-VNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSN---EK---------------------   58 (106)
T ss_dssp             SSE-EEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTS---CE---------------------
T ss_pred             CCE-EEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCc---cc---------------------
Confidence            444 777 5578999999999971     110       125699999987433   11                     


Q ss_pred             cccccccccccccCCCCceeccCCCCCCeEEEEEEEEecc--CCCCCccceEEee
Q psy8774         256 AVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN--GLGRLSGKVTVKV  308 (427)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~--G~g~~s~~~~~~t  308 (427)
                              ..........++|.+|.|++.|+|+|+|....  ..|.+|.+..+.|
T Consensus        59 --------~~~~~~~~~~~~l~~L~p~t~YCv~V~~~~~~~~~~s~~S~~~C~~t  105 (106)
T PF09294_consen   59 --------KKEIETKNSSVTLSDLKPGTNYCVSVQAFSPSQNKNSQPSEPQCITT  105 (106)
T ss_dssp             --------EEEEESSSEEEEEES--TTSEEEEEEEEEECSSTEEEEEBSEEEEE-
T ss_pred             --------eEEEeecCCEEEEeCCCCCCCEEEEEEEEeccCCCcCCCCCCEeEeC
Confidence                    11233445567899999999999999994332  2667777666655

They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....

>KOG4367|consensus

Probab=97.12  E-value=0.00041  Score=63.10  Aligned_cols=72  Identities=17%  Similarity=0.204  Sum_probs=63.1

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccc
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETV   78 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~   78 (427)
                      .++++|+|..|.....++++|.++....++..+..+....++.+++.+|.-++.|..||.+.|..|.++.+.
T Consensus       452 nns~t~~wkqp~~~~~~~dg~~leld~g~~g~frevy~g~etmctvdglhfns~y~arvka~n~tg~s~ys~  523 (699)
T KOG4367|consen  452 NNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSK  523 (699)
T ss_pred             CCceEEEeecCCCCCCCCcceEEEeecCCCCceeEEEecCceeEEecceecchhHHHHHHHhhccCCCcccc
Confidence            578999999766567789999999988877777777688899999999999999999999999999998664

>KOG4806|consensus

Probab=96.85  E-value=0.24  Score=44.60  Aligned_cols=244  Identities=14%  Similarity=0.096  Sum_probs=118.3

Q ss_pred             ecCcceEEEcCCCCCceEEEEEEEEeccCc-Cc-ccceEEeCCCCCCCCCCeeeE------EEeecCCEE-EEEeeCCCC
Q psy8774          44 NSKNMSFLITNLERGVEYEFRIAGQNHIGY-GQ-ETVRYYTTPEGPPTGPPANIS------HHFQTPDVV-CITWDPPLR  114 (427)
Q Consensus        44 ~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~-~~-~~~~~~~t~~~~p~~~p~~~~------~~~~~~~~v-~v~W~~p~~  114 (427)
                      ......+++.+|.|.+.|.|.|..++..-. +. .......|.+.+. .+|..|.      +........ -++...|..
T Consensus       166 ig~~n~~~v~~L~pdt~Y~~dvFvv~~~r~~sTay~~t~~~t~e~~k-Qk~~~Lk~g~l~qv~v~~~kG~kf~~f~~pq~  244 (454)
T KOG4806|consen  166 IGNKNIFTVSDLKPDTQYYFDVFVVNINRNMSTAYVGTFARTKEEAK-QKTVELKDGKLTQVFVKGRKGAKFLSFKVPQT  244 (454)
T ss_pred             cCCccEEEhhhcCCCceEEEEEEEEecCCCcceeeeeeehhhhhhhc-CCceeeccCcEEEEEecccccceEEEecCcch
Confidence            456669999999999999999999875432 21 1111222222221 1111111      111111112 234444433


Q ss_pred             CCCCcceeEEEEEEEEcc-------CCCceE-EEeeee-eEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEc---c
Q psy8774         115 THRNGQIVLYNVKFHKKI-------DANNVI-HRNTTQ-TKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT---A  182 (427)
Q Consensus       115 ~~~~~~i~~Y~v~~~~~~-------~~~~~~-~~~~~~-~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t---~  182 (427)
                      ...++...-..|.-+...       .+.... ...-.. +.+.=..+.++..|.+++...|..- +..--.+...|   .
T Consensus       245 ~~~l~qp~mhllh~C~g~vrinl~R~rkel~kS~af~g~~~~~Qfvv~~~~~~~~rf~~~ndde-~~~~v~V~aSt~~t~  323 (454)
T KOG4806|consen  245 TRSLGQPFMHLLHSCLGEVRINLLRQRKELGKSEAFYGPTYIRQFVVLPGERYLMRFEPSNDDE-ALQKVMVAASTEATF  323 (454)
T ss_pred             hhhcCCceeeeeecccccceeehhhchhhhcccccccCceeeeEEEecCCCceEEEEEecCCch-hhheeEeeeeccccc
Confidence            233332222222211110       000000 000111 2122234678889999998887532 22222222333   3


Q ss_pred             cccCCCCCceEEEeee--CcEEEEEeeeCCCCCCceeEEEEEEEeccccccccccccccccccccc--ceeEEe-eeccc
Q psy8774         183 RDMVRAPLGVKALATS--DQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSN--IARIFY-TMTAV  257 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~--~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~  257 (427)
                      .+.|.-|.+-.+..+.  -++.+|.|....   ..-..|=|+.......+.......+.+.++-..  ..-.+. .+++.
T Consensus       324 ~~~P~LP~dTtVk~v~r~CSsAtIaW~gs~---d~~~kyCIy~~~~~~~e~~v~~~~N~C~g~~~~~~s~~v~c~y~hs~  400 (454)
T KOG4806|consen  324 RDLPELPQDTTVKNVRRRCSSATIAWNGSP---DEELKYCIYVFNLPQRERSVVDFTNYCMGFVPKRVSQYVYCEYMHSR  400 (454)
T ss_pred             CcCCCCCCCceEeeeccccchheeeeccCc---chheeEEEEEecccchhhhhhhhhccccCccccceeEEEeEEEecCh
Confidence            3567888888887765  468999998776   335677777766533111111112333332110  000111 12221


Q ss_pred             cccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC
Q psy8774         258 EDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL  297 (427)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~  297 (427)
                      .     ......+..+-+|.||.||+.|.+-|.|.-..|.
T Consensus       401 ~-----~q~~~~~i~teTI~gL~PgssYlldv~a~~~~g~  435 (454)
T KOG4806|consen  401 E-----RQQSPDNIETETILGLMPGSSYLLDVTANLSMGK  435 (454)
T ss_pred             h-----hhcchhhhhhhhhcccccCceEEEEEEEcccCCc
Confidence            0     1112223345678999999999999999876653

>KOG4228|consensus

Probab=96.70  E-value=0.0081  Score=61.95  Aligned_cols=168  Identities=13%  Similarity=0.058  Sum_probs=93.2

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccc-eEE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETV-RYY   81 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~-~~~   81 (427)
                      +..+..++.+.|..+.  . ....|.|.++..... ...........+....+.+-..|.+  .+.|..|.+.... ..-
T Consensus        34 t~~~~~~~~~~~~~~~--t-~~~~y~v~~~~~~s~-~~~~~~~~~~~~s~~~~~~~~~~~~--~evnt~~~a~~~~~~~~  107 (1087)
T KOG4228|consen   34 TGSTATSWVQAELLGS--T-WPNYYQVIFKALSSG-YGYIDVDLTTRLSYPCLSPPSFLEL--VEVNTIGRAPFQCPVAP  107 (1087)
T ss_pred             ccccccceeehhhccC--C-ChhhhheeeeEeccC-cceeeccceeecccCCCCCcchhhh--hhcccccccccccccCC
Confidence            3445566666776664  2 556677777765544 3222222333355555666666665  5555555554321 122


Q ss_pred             eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEE
Q psy8774          82 TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAE  161 (427)
Q Consensus        82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~  161 (427)
                      ++....+...+............+.++|..+..  ..+                                          
T Consensus       108 rt~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--~~~------------------------------------------  143 (1087)
T KOG4228|consen  108 RTGEQATLSLQRDVQALMLSAATAHVNWRRFSA--TVG------------------------------------------  143 (1087)
T ss_pred             ccccccccccccchhhhhhhhhhhccCcccccc--ccc------------------------------------------
Confidence            222233333343444344444455555555420  000                                          


Q ss_pred             EEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEec
Q psy8774         162 VQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMT  226 (427)
Q Consensus       162 V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~  226 (427)
                      +.+....|.++.+..+.+.+....|..|.    .....++++++|.++.  ...+..|++.+...
T Consensus       144 ~~~~~~~~~~~~~t~i~i~~~~~~p~~~~----~~~~~~~it~~w~~~~--~~~~~~ykl~~~~~  202 (1087)
T KOG4228|consen  144 PLAIASPGLGPPSTYIQITTNANSPIQPG----EEEEYTTITGSWSPPH--AVSLDTYKLLHLDP  202 (1087)
T ss_pred             ccccCCcccCCCCceEEEeccCCCCCCCC----cceEEEEEEecCCCCC--cccchhhhhhhcCC
Confidence            55666667776666777777665554444    5556789999998886  35788888877665

>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R

Probab=96.67  E-value=0.018  Score=43.69  Aligned_cols=78  Identities=21%  Similarity=0.238  Sum_probs=55.5

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccCC--CCcEEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNLE--EGIEYSAE  161 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L~--p~t~Y~~~  161 (427)
                      ...+|.++++.+. .-...|.|+++.  . ...-..|.|+|+.. ....+...    ....+.+.|++..  +...|.++
T Consensus        21 ~lp~P~nv~~~s~-nf~~iL~W~~~~--~-~~~~~~ytVq~~~~-~~~~W~~v~~C~~i~~~~Cdlt~~~~~~~~~Y~~r   95 (107)
T PF01108_consen   21 SLPAPQNVTVDSV-NFKHILRWDPGP--G-SPPNVTYTVQYKKY-GSSSWKDVPGCQNITETSCDLTDETSDPSESYYAR   95 (107)
T ss_dssp             SGSSCEEEEEEEE-TTEEEEEEEEST--T-SSSTEEEEEEEEES-STSCEEEECCEEEESSSEEECTTCCTTTTSEEEEE
T ss_pred             cCCCCCeeEEEEE-CCceEEEeCCCC--C-CCCCeEEEEEEEec-CCcceeeccceecccccceeCcchhhcCcCCEEEE
Confidence            3347899998876 456899999963  2 23556899999943 24444443    3557899998844  79999999


Q ss_pred             EEEeeCCCC
Q psy8774         162 VQAITKAGP  170 (427)
Q Consensus       162 V~a~~~~g~  170 (427)
                      |+|..+...
T Consensus        96 V~A~~~~~~  104 (107)
T PF01108_consen   96 VRAEVGNQT  104 (107)
T ss_dssp             EEEEETTEE
T ss_pred             EEEEeCCcc
Confidence            999965433

...

>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R

Probab=96.55  E-value=0.025  Score=42.94  Aligned_cols=84  Identities=19%  Similarity=0.230  Sum_probs=54.5

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      +..++|.++++... +-...|+|+++.. ...-..|.|+|...   ....|....                         
T Consensus        20 ~~lp~P~nv~~~s~-nf~~iL~W~~~~~-~~~~~~ytVq~~~~---~~~~W~~v~-------------------------   69 (107)
T PF01108_consen   20 ASLPAPQNVTVDSV-NFKHILRWDPGPG-SPPNVTYTVQYKKY---GSSSWKDVP-------------------------   69 (107)
T ss_dssp             SSGSSCEEEEEEEE-TTEEEEEEEESTT-SSSTEEEEEEEEES---STSCEEEEC-------------------------
T ss_pred             ccCCCCCeeEEEEE-CCceEEEeCCCCC-CCCCeEEEEEEEec---CCcceeecc-------------------------
Confidence            34478999999886 4568899999652 24668899999933   333442110                         


Q ss_pred             cccccCCCCceeccCCC--CCCeEEEEEEEEeccCCC
Q psy8774         264 SQKSVPLTESAELTSLE--KFTEYAVAVAARTVNGLG  298 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~--p~t~Y~~~V~a~~~~G~g  298 (427)
                       .......++..|++..  +...|.++|+|..+...|
T Consensus        70 -~C~~i~~~~Cdlt~~~~~~~~~Y~~rV~A~~~~~~S  105 (107)
T PF01108_consen   70 -GCQNITETSCDLTDETSDPSESYYARVRAEVGNQTS  105 (107)
T ss_dssp             -CEEEESSSEEECTTCCTTTTSEEEEEEEEEETTEEE
T ss_pred             -ceecccccceeCcchhhcCcCCEEEEEEEEeCCccC
Confidence             0122234566666533  678999999999776443

...

>COG4733 Phage-related protein, tail component [Function unknown]

Probab=96.09  E-value=0.13  Score=51.67  Aligned_cols=142  Identities=12%  Similarity=0.041  Sum_probs=78.1

Q ss_pred             EEEEEEEccCCCceEEEe-eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCC-CeEEEc--ccccCCCCCceEEEeeeC
Q psy8774         124 YNVKFHKKIDANNVIHRN-TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP-KLSLMT--ARDMVRAPLGVKALATSD  199 (427)
Q Consensus       124 Y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~-~~~~~t--~~~~p~~p~~l~~~~~~~  199 (427)
                      +.+.|....++ .+.... .....+.+.+|.+ .+|.++|+|.|..|....-. ...+..  ...||..+.-+..... .
T Consensus       639 ~~~a~~a~~~~-~~vta~rt~~~~~~~~gi~~-GqY~i~VrAiN~~g~~~~~a~s~~f~i~g~~~Ppp~~~t~~a~~i-t  715 (952)
T COG4733         639 AAWAYEAGWDG-NWITAPRTSAAGFDVEGIPA-GQYAIRVRAINVFEPNSPDATAYEFALNGKKVPPPKAMIYDAVII-T  715 (952)
T ss_pred             HHHHhhcccCC-ceEecccccccceeecCcCc-cceEEEEEEeeccCCCCCCcceeEEEecCCCCCCCcccccceEEE-E
Confidence            44555544333 333332 5588899999998 68999999999988653322 344444  3344433333333332 2


Q ss_pred             cEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceec--c
Q psy8774         200 QSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAEL--T  277 (427)
Q Consensus       200 ~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~  277 (427)
                      -.+.+.|-.|. ..-.+..-.|++......+.                                .....+....-.+  .
T Consensus       716 ~~~~l~v~dPt-~~~d~~~sei~~s~~~d~~~--------------------------------~Ar~LG~~~~~~~~~~  762 (952)
T COG4733         716 LVIRLVVGDPT-GAVDITSTEIRSAVIADGNF--------------------------------QARSLGNLNYPGLFSV  762 (952)
T ss_pred             eeeeEEEecCC-cceEEeeeeeeeeccccchh--------------------------------HHhhhhcccccccccc
Confidence            35678887776 11123333333333211111                                0011111111111  5


Q ss_pred             CCCCCCeEEEEEEEEeccCCCCCc
Q psy8774         278 SLEKFTEYAVAVAARTVNGLGRLS  301 (427)
Q Consensus       278 ~L~p~t~Y~~~V~a~~~~G~g~~s  301 (427)
                      +|+++..|.|+++++|..|...+-
T Consensus       763 ~i~~g~~~~F~~R~Vn~vG~~~~~  786 (952)
T COG4733         763 GIQAGLTFWFRNRNVDLVGNNDKW  786 (952)
T ss_pred             CcCCCceEEEEeeecccccccccc
Confidence            899999999999999998854433

>COG4733 Phage-related protein, tail component [Function unknown]

Probab=95.64  E-value=0.07  Score=53.53  Aligned_cols=140  Identities=10%  Similarity=0.064  Sum_probs=78.2

Q ss_pred             eEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcc-c-ceEE-eCCCCCCCCCCeeeEEEeecCC
Q psy8774          27 YRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQE-T-VRYY-TTPEGPPTGPPANISHHFQTPD  103 (427)
Q Consensus        27 Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~-~-~~~~-~t~~~~p~~~p~~~~~~~~~~~  103 (427)
                      +.+.|....+..|..........|.+.+|.+| +|.++|+|.|..|.... . +..+ ......|+..+..+.... ..-
T Consensus       639 ~~~a~~a~~~~~~vta~rt~~~~~~~~gi~~G-qY~i~VrAiN~~g~~~~~a~s~~f~i~g~~~Ppp~~~t~~a~~-it~  716 (952)
T COG4733         639 AAWAYEAGWDGNWITAPRTSAAGFDVEGIPAG-QYAIRVRAINVFEPNSPDATAYEFALNGKKVPPPKAMIYDAVI-ITL  716 (952)
T ss_pred             HHHHhhcccCCceEecccccccceeecCcCcc-ceEEEEEEeeccCCCCCCcceeEEEecCCCCCCCcccccceEE-EEe
Confidence            44455444444444443667889999999995 79999999999986652 2 2222 223334432222222222 223


Q ss_pred             EEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeee--eeEEEEccCCCCcEEEEEEEEeeCCCCC
Q psy8774         104 VVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTT--QTKAVFSNLEEGIEYSAEVQAITKAGPG  171 (427)
Q Consensus       104 ~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~i~~L~p~t~Y~~~V~a~~~~g~~  171 (427)
                      .+.+.|-.|.   ..-.+..-.+++....+..........  .....-.+|.++..|.|+++++|..|..
T Consensus       717 ~~~l~v~dPt---~~~d~~~sei~~s~~~d~~~~Ar~LG~~~~~~~~~~~i~~g~~~~F~~R~Vn~vG~~  783 (952)
T COG4733         717 VIRLVVGDPT---GAVDITSTEIRSAVIADGNFQARSLGNLNYPGLFSVGIQAGLTFWFRNRNVDLVGNN  783 (952)
T ss_pred             eeeEEEecCC---cceEEeeeeeeeeccccchhHHhhhhccccccccccCcCCCceEEEEeeeccccccc
Confidence            6778888772   112333333333333222221111111  1112226899999999999999998875

>KOG0613|consensus

Probab=95.36  E-value=0.45  Score=50.42  Aligned_cols=343  Identities=11%  Similarity=0.050  Sum_probs=170.2

Q ss_pred             EEEeeCCC-CCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccc-----------
Q psy8774          11 ELVWSQPT-QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETV-----------   78 (427)
Q Consensus        11 ~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~-----------   78 (427)
                      .++|..+. +.......|.+.........|.........-....++.+...|.++|.+.+..+....++           
T Consensus         9 ~lr~~r~~~~~~~~~t~~~~~~~s~l~~~r~~~s~~~~~~v~~~~e~~~a~~~~rv~~~~r~~~~~~s~~~~~~~~~pa~   88 (1205)
T KOG0613|consen    9 CLRPDRPGKLVFEAKTTYTVDKLSILPDVRDSGSFIPDYGVLQVKEGETALLTGRVDGEPRPELIWGSSGIEIDMMVPAT   88 (1205)
T ss_pred             ccCcccCCCcccccCCCCCccccccChhhccCCCccccCcceeccCCcceeeeeeeccccccCCCCcccccchhhccccc
Confidence            57888776 333455778887665544444333323333455567888889999998887655322111           


Q ss_pred             ----e--------------------------------E-----EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCC
Q psy8774          79 ----R--------------------------------Y-----YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHR  117 (427)
Q Consensus        79 ----~--------------------------------~-----~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~  117 (427)
                          .                                -     .......|..+|.+-.........+...|..+.+ +.
T Consensus        89 ~~~~~~~~~~~l~~t~~v~~~~ad~~~~~~~e~~~~i~~~~~~~v~~~e~pd~~~~~~~sv~~~~~~v~~~~~~~~~-d~  167 (1205)
T KOG0613|consen   89 EYSLVTHMNTELGSTWAVGDEYADDRPIHLVERKALIDVVPSPEVCQQEKPDPPPSNRESVLVHRARVLPAWRPPRE-DG  167 (1205)
T ss_pred             ccccccccccccccccccccccccccccccccccccCCccccchhhhhcCCCCCCCCccceeecCceecccccCCcc-Cc
Confidence                0                                0     0000011222333333344566778889998863 44


Q ss_pred             CcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEee
Q psy8774         118 NGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALAT  197 (427)
Q Consensus       118 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~  197 (427)
                      .....+|.|..+..+..............-.+....    |.+.|+++-..|....-... +. ...++.+...+.....
T Consensus       168 ~~k~~~~iie~~~~g~s~~~~~l~~~~~~s~~~~a~----~e~~v~~v~s~gqp~~~~~~-~~-~g~~i~~~~~~~~s~t  241 (1205)
T KOG0613|consen  168 GRKREEYIIERRQAGRSPWLKRLTQPTDDSTDTDAH----YESRVRAVVSAGQPEPLERW-EI-LGELIAPGSAPSMSVT  241 (1205)
T ss_pred             cceeecceEEEEeccCCCcccccccccCCcceeccc----cceeEEEEEecCCCccchhh-hh-cccccCCCCccccccc
Confidence            447788999988774333322222222222233232    56666666555554211111 11 1122233333344333


Q ss_pred             e---CcEEEEEeeeCCCCC-CceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCc
Q psy8774         198 S---DQSVEVWWKPVPAGR-GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTES  273 (427)
Q Consensus       198 ~---~~si~v~W~~p~~~~-g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (427)
                      .   ...+.+.|..+..+. -.+.+|.+......+  ...+..                           .........+
T Consensus       242 ~e~s~~~i~~~l~~~~G~~~~~~~~~l~e~~~~~~--~~t~~i---------------------------~~~~~~~~~s  292 (1205)
T KOG0613|consen  242 LEASDRKIQLTLRAPRGPYSAHILGYLIEQRKHKG--GNTKTI---------------------------QNDGPEPELS  292 (1205)
T ss_pred             cchhheeeeEEeecCCCchHHHHhcchhhhcccCC--Cccccc---------------------------cccCCccccc
Confidence            3   345666676665221 145556555444211  111100                           1122233445


Q ss_pred             eeccCCCCCCeEEEEEEEEeccCCCCCccce---EEeec---CCCCCcceEEeecCCCeEEEEecCCCc--CCCc-eEEE
Q psy8774         274 AELTSLEKFTEYAVAVAARTVNGLGRLSGKV---TVKVK---PEDVPLSLRAHDVSTHSMTLSWSPPIK--LNPV-KYKE  344 (427)
Q Consensus       274 ~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~---~~~t~---~~~~P~~l~~~~~~~~~v~l~W~~P~~--~~g~-~Y~i  344 (427)
                      ++.-.-..+..|.+.|...-..|.+.+-...   .+.+.   +...+.++.+.....+.+.+.|.-+..  +++. .|++
T Consensus       293 ~t~~~~~~~~q~~~~v~~~~~i~~~~~~p~~~~~aaa~~~~~~v~~~~~~~v~a~d~~~v~m~~~~~~~~~p~~~~~~~~  372 (1205)
T KOG0613|consen  293 WTVADKRQGCQDRFKVTEEAPIGKGKPGPESLQAAAARPPEVPVGLVRNLSVTARDNTLVEMPTALSGTQKPDEAQGYHG  372 (1205)
T ss_pred             eeeecccCCcccceeeeEEeeccccccCchhhhhhccCCccccccccccceeccccCcceeecccccCCcCCchheeecc
Confidence            5555556777888888888777755544322   22221   223345666666788999999976654  3322 5554


Q ss_pred             EEeheeeccee--ee-eeEEEE-eecccccccceEEEEEeecccCCCCc
Q psy8774         345 VSEKIQERRLQ--KY-GQYRYF-ETRDESYIGKRVERMEVRGRKGRGRP  389 (427)
Q Consensus       345 ~~~~~~~~~l~--~~-t~y~~~-~~~~~~~~~~~~~~v~a~~~~g~g~p  389 (427)
                      .-......+..  +. +.+... ...+......+..++.|.|..|.-.+
T Consensus       373 ~~~~~~~~~~~~~~~~~~ts~~~~~~~~~~~e~~~~~~~a~n~~g~~~~  421 (1205)
T KOG0613|consen  373 EEVSSESLGALPCPVGTVTSHTYTIKDAGPGEGYFTRVPAVNKGGTEQT  421 (1205)
T ss_pred             cccccccccccccccccccCcchhhhhcCcccccccccceeccCCcccc
Confidence            42211111111  11 111111 22333444556677788877776654

>KOG0613|consensus

Probab=95.23  E-value=0.32  Score=51.46  Aligned_cols=261  Identities=13%  Similarity=0.059  Sum_probs=145.3

Q ss_pred             ceEEEEEeeCCC-CCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCC-
Q psy8774           7 EVTIELVWSQPT-QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTP-   84 (427)
Q Consensus         7 ~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~-   84 (427)
                      ...+...|..+. +....+.+|.|+.+..++..|..........-.+..+.    |.++|+.+...|...+........ 
T Consensus       153 ~~~v~~~~~~~~~d~~~k~~~~iie~~~~g~s~~~~~l~~~~~~s~~~~a~----~e~~v~~v~s~gqp~~~~~~~~~g~  228 (1205)
T KOG0613|consen  153 RARVLPAWRPPREDGGRKREEYIIERRQAGRSPWLKRLTQPTDDSTDTDAH----YESRVRAVVSAGQPEPLERWEILGE  228 (1205)
T ss_pred             CceecccccCCccCccceeecceEEEEeccCCCcccccccccCCcceeccc----cceeEEEEEecCCCccchhhhhccc
Confidence            345667898887 44556789999999888888877763333333333443    667777776666554332211111 


Q ss_pred             CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEE
Q psy8774          85 EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAE  161 (427)
Q Consensus        85 ~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~  161 (427)
                      ...|...|.--.........+.+.|..+.. .....+.+|.++.....++..+....   ....+.+...-.++.+|.++
T Consensus       229 ~i~~~~~~~~s~t~e~s~~~i~~~l~~~~G-~~~~~~~~~l~e~~~~~~~~t~~i~~~~~~~~~s~t~~~~~~~~q~~~~  307 (1205)
T KOG0613|consen  229 LIAPGSAPSMSVTLEASDRKIQLTLRAPRG-PYSAHILGYLIEQRKHKGGNTKTIQNDGPEPELSWTVADKRQGCQDRFK  307 (1205)
T ss_pred             ccCCCCccccccccchhheeeeEEeecCCC-chHHHHhcchhhhcccCCCccccccccCCccccceeeecccCCccccee
Confidence            112223332222223344567778876641 11124556666554421122221111   22445555555788899999


Q ss_pred             EEEeeCCCCCCCCCCe---EEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEeccccccccccc
Q psy8774         162 VQAITKAGPGPWSPKL---SLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQ  236 (427)
Q Consensus       162 V~a~~~~g~~~~s~~~---~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~  236 (427)
                      |...-..|.+.+-...   .+.+ ...+..-+.++.+.....+.+.+.|......-. ...+|.+.-...   ....+. 
T Consensus       308 v~~~~~i~~~~~~p~~~~~aaa~~~~~~v~~~~~~~v~a~d~~~v~m~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~-  383 (1205)
T KOG0613|consen  308 VTEEAPIGKGKPGPESLQAAAARPPEVPVGLVRNLSVTARDNTLVEMPTALSGTQKPDEAQGYHGEEVSS---ESLGAL-  383 (1205)
T ss_pred             eeEEeeccccccCchhhhhhccCCccccccccccceeccccCcceeecccccCCcCCchheeeccccccc---cccccc-
Confidence            9888777766432222   2222 333445666777777778889999976653222 244444433222   111110 


Q ss_pred             ccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         237 KSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                       .                         ........+.+.+.++.++..|..++.|.|..|......
T Consensus       384 -~-------------------------~~~~~~ts~~~~~~~~~~~e~~~~~~~a~n~~g~~~~~~  423 (1205)
T KOG0613|consen  384 -P-------------------------CPVGTVTSHTYTIKDAGPGEGYFTRVPAVNKGGTEQTIA  423 (1205)
T ss_pred             -c-------------------------cccccccCcchhhhhcCcccccccccceeccCCcccccc
Confidence             0                         112233455677889999999999999999988655443

>PF09067 EpoR_lig-bind: Erythropoietin receptor, ligand binding; InterPro: IPR015152 Members of this entry include the growth hormone and erythropoietin receptors

Probab=94.90  E-value=0.37  Score=36.11  Aligned_cols=78  Identities=17%  Similarity=0.270  Sum_probs=54.8

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe----eeeeE-----EEEc--cCCCCc
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN----TTQTK-----AVFS--NLEEGI  156 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----~~~~~-----~~i~--~L~p~t  156 (427)
                      |++.|.++.+...+...+++.|++..  ..+ ....|.+.|....  ..+..-.    ...++     +.+.  +..-.+
T Consensus         7 ~p~~P~~~~C~S~~~etftC~W~~g~--~~~-l~~~y~L~Y~~~~--~~~~eCp~~~~~~~ns~~~~~C~F~~~~t~lf~   81 (104)
T PF09067_consen    7 PPEKPENLKCFSREMETFTCFWEPGS--EGN-LPTNYTLFYKKEG--EEWKECPDYSTSGPNSTVRHICYFPKSDTSLFV   81 (104)
T ss_dssp             HCCCCEEEEEEBSSSS-EEEEEEEES--SST-STCEEEEEEEETT--SEEEEESESSTTETTEEEEEEEEE-CCGCSSSS
T ss_pred             CCCCCccCccCCCCCCcEEEEeeCCC--CCC-CCCcEEEEEEeCC--CCCccCCCeEecCCCCceeEEEEcCCCCeEEEE
Confidence            45679999999999999999999884  332 2334999999873  2222211    12334     5565  788999


Q ss_pred             EEEEEEEEeeCCCC
Q psy8774         157 EYSAEVQAITKAGP  170 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~  170 (427)
                      .|.|+|.|.+..|.
T Consensus        82 ~y~i~V~a~~~~~~   95 (104)
T PF09067_consen   82 PYCIQVEATNALGS   95 (104)
T ss_dssp             EEEEEEEEEETTEE
T ss_pred             EEEEEEEeccCCCc
Confidence            99999999988765

The latter interacts with erythropoietin (EPO), with subsequent initiation of the downstream chain of events associated with binding of EPO to the receptor, including EPO-induced erythroblast proliferation and differentiation through induction of the JAK2/STAT5 signalling cascade. The domain adopts a secondary structure composed of a short amino-terminal helix, followed by two beta-sandwich regions []. ; PDB: 3NCB_B 3NCF_B 3NCE_B 3N0P_B 3NCC_B 1BP3_B 3N06_B 3MZG_B 3D48_R 1F6F_C ....

>PF09067 EpoR_lig-bind: Erythropoietin receptor, ligand binding; InterPro: IPR015152 Members of this entry include the growth hormone and erythropoietin receptors

Probab=94.53  E-value=0.32  Score=36.44  Aligned_cols=85  Identities=20%  Similarity=0.345  Sum_probs=55.8

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      .+|..|.++.+...+...++.-|++....+.. ..|.+.|....    ..+..+...                       
T Consensus         6 ~~p~~P~~~~C~S~~~etftC~W~~g~~~~l~-~~y~L~Y~~~~----~~~~eCp~~-----------------------   57 (104)
T PF09067_consen    6 LPPEKPENLKCFSREMETFTCFWEPGSEGNLP-TNYTLFYKKEG----EEWKECPDY-----------------------   57 (104)
T ss_dssp             HHCCCCEEEEEEBSSSS-EEEEEEEESSSTST-CEEEEEEEETT----SEEEEESES-----------------------
T ss_pred             cCCCCCccCccCCCCCCcEEEEeeCCCCCCCC-CcEEEEEEeCC----CCCccCCCe-----------------------
Confidence            46788999999999999999999999855433 44999999873    222222111                       


Q ss_pred             cccccCCC-----CceeccCCCCCCeEEEEEEEEeccCC
Q psy8774         264 SQKSVPLT-----ESAELTSLEKFTEYAVAVAARTVNGL  297 (427)
Q Consensus       264 ~~~~~~~~-----~~~~l~~L~p~t~Y~~~V~a~~~~G~  297 (427)
                       .....+.     ..|--.+..-.+.|.|+|.|.+..|.
T Consensus        58 -~~~~~ns~~~~~C~F~~~~t~lf~~y~i~V~a~~~~~~   95 (104)
T PF09067_consen   58 -STSGPNSTVRHICYFPKSDTSLFVPYCIQVEATNALGS   95 (104)
T ss_dssp             -STTETTEEEEEEEEE-CCGCSSSSEEEEEEEEEETTEE
T ss_pred             -EecCCCCceeEEEEcCCCCeEEEEEEEEEEEeccCCCc
Confidence             0111112     23333467778999999999998753

The latter interacts with erythropoietin (EPO), with subsequent initiation of the downstream chain of events associated with binding of EPO to the receptor, including EPO-induced erythroblast proliferation and differentiation through induction of the JAK2/STAT5 signalling cascade. The domain adopts a secondary structure composed of a short amino-terminal helix, followed by two beta-sandwich regions []. ; PDB: 3NCB_B 3NCF_B 3NCE_B 3N0P_B 3NCC_B 1BP3_B 3N06_B 3MZG_B 3D48_R 1F6F_C ....

>PLN02533 probable purple acid phosphatase

Probab=92.29  E-value=0.94  Score=43.70  Aligned_cols=99  Identities=11%  Similarity=0.083  Sum_probs=55.5

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ..+..|..+++.-.+.+++.|+|.-.... .    -.|.|...... .... ....        ... |.     ..   
T Consensus        39 ~~~~~P~qvhls~~~~~~m~V~W~T~~~~-~----~~V~yG~~~~~-l~~~-a~g~--------~~~-~~-----~~---   94 (427)
T PLN02533         39 DDPTHPDQVHISLVGPDKMRISWITQDSI-P----PSVVYGTVSGK-YEGS-ANGT--------SSS-YH-----YL---   94 (427)
T ss_pred             CCCCCCceEEEEEcCCCeEEEEEECCCCC-C----CEEEEecCCCC-Ccce-EEEE--------EEE-Ee-----cc---
Confidence            34578889999888889999999877532 1    22555443110 0000 0000        000 00     00   


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCC
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED  312 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~  312 (427)
                      .....+-...+.|++|+|++.|.++|-      ....+....|+|.|..
T Consensus        95 ~~~~~g~iH~v~l~~L~p~T~Y~Yrvg------~~~~s~~~~F~T~p~~  137 (427)
T PLN02533         95 LIYRSGQINDVVIGPLKPNTVYYYKCG------GPSSTQEFSFRTPPSK  137 (427)
T ss_pred             ccccCCeEEEEEeCCCCCCCEEEEEEC------CCCCccceEEECCCCC
Confidence            001123345678999999999999983      1233666788886543

>PLN02533 probable purple acid phosphatase

Probab=90.83  E-value=7.5  Score=37.60  Aligned_cols=82  Identities=13%  Similarity=0.131  Sum_probs=51.0

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe-------------eeeeEEEEccCCC
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-------------TTQTKAVFSNLEE  154 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~~i~~L~p  154 (427)
                      .+..|..+++...+.+++.|+|.....  . ..    .|+|....+.-......             .-...+.|++|+|
T Consensus        40 ~~~~P~qvhls~~~~~~m~V~W~T~~~--~-~~----~V~yG~~~~~l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p  112 (427)
T PLN02533         40 DPTHPDQVHISLVGPDKMRISWITQDS--I-PP----SVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKP  112 (427)
T ss_pred             CCCCCceEEEEEcCCCeEEEEEECCCC--C-CC----EEEEecCCCCCcceEEEEEEEEeccccccCCeEEEEEeCCCCC
Confidence            445688999888789999999998742  1 12    24554432111111000             1134578999999


Q ss_pred             CcEEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         155 GIEYSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       155 ~t~Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      +|.|.++|-      ....|....|+|.
T Consensus       113 ~T~Y~Yrvg------~~~~s~~~~F~T~  134 (427)
T PLN02533        113 NTVYYYKCG------GPSSTQEFSFRTP  134 (427)
T ss_pred             CCEEEEEEC------CCCCccceEEECC
Confidence            999999983      1224666778874

>PF09240 IL6Ra-bind: Interleukin-6 receptor alpha chain, binding; InterPro: IPR015321 Members of this entry adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology

Probab=90.30  E-value=5.9  Score=29.31  Aligned_cols=77  Identities=18%  Similarity=0.203  Sum_probs=52.3

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe-----eeeeEEEEccCCC----CcEEEEE
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-----TTQTKAVFSNLEE----GIEYSAE  161 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~~i~~L~p----~t~Y~~~  161 (427)
                      +|++|.+...+...+.++|.+..  .. ..-..|.+.|+............     .....+.+.....    ...|.|.
T Consensus         1 ~~~nlsC~~~~~~~m~CtW~~g~--~~-~~~t~y~L~~~~~~~~~~~eC~~y~~~~~~~~gC~~~~~~~~~~~~~~~~v~   77 (99)
T PF09240_consen    1 KPQNLSCFIYNLEYMNCTWEPGK--EA-PPDTQYTLYYWYSPLEEEKECPHYSKDSGTRIGCQFPVSEIDSSEFSQYNVC   77 (99)
T ss_dssp             S-EEEEEEEETTTEEEEEEECCT--TC-STTEEEEEEEEETTSSSEEEESEEEESTSSEEEEEEESCTT-TTTTSEEEEE
T ss_pred             CCeeCEEEEECCEEEEEEECCCC--CC-CCcccEEEEEEcCCCCccccCCCccccCCceeEEEecCCCccccccceEEEE
Confidence            36799999889999999999763  21 24458999999874333333222     1245667766555    3589999


Q ss_pred             EEEeeCCCC
Q psy8774         162 VQAITKAGP  170 (427)
Q Consensus       162 V~a~~~~g~  170 (427)
                      |.+.+..|.
T Consensus        78 V~~ss~~~~   86 (99)
T PF09240_consen   78 VNGSSSAGS   86 (99)
T ss_dssp             EEEEETTEE
T ss_pred             EEeccCCCc
Confidence            999887665

They are required for binding to the cytokine Interleukin-6 []. ; PDB: 1N26_A 1P9M_C 3LB6_C 1PVH_A 3L5H_A 1BQU_A 1I1R_A 3QT2_B 3BPN_C 3BPO_C ....

>KOG4806|consensus

Probab=90.19  E-value=15  Score=33.66  Aligned_cols=111  Identities=14%  Similarity=0.122  Sum_probs=63.6

Q ss_pred             CCCCCCeEEEEEEEEeccCCCCCccceEEeec-----CCCCCcceEEeec--CCCeEEEEecCCCcCCCceEEEEEehee
Q psy8774         278 SLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK-----PEDVPLSLRAHDV--STHSMTLSWSPPIKLNPVKYKEVSEKIQ  350 (427)
Q Consensus       278 ~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~-----~~~~P~~l~~~~~--~~~~v~l~W~~P~~~~g~~Y~i~~~~~~  350 (427)
                      .+.++..|.+++...|.. ++.....+-.+|.     -+..|.+-++..+  .=.+.++.|....+. -+.|=|+..+..
T Consensus       290 vv~~~~~~~~rf~~~ndd-e~~~~v~V~aSt~~t~~~~P~LP~dTtVk~v~r~CSsAtIaW~gs~d~-~~kyCIy~~~~~  367 (454)
T KOG4806|consen  290 VVLPGERYLMRFEPSNDD-EALQKVMVAASTEATFRDLPELPQDTTVKNVRRRCSSATIAWNGSPDE-ELKYCIYVFNLP  367 (454)
T ss_pred             EecCCCceEEEEEecCCc-hhhheeEeeeecccccCcCCCCCCCceEeeeccccchheeeeccCcch-heeEEEEEeccc
Confidence            567888999999998876 4443222333331     2345666666655  446889999865543 346666543211


Q ss_pred             ec------------c--eeeeeeEEEE------------------eecccccccceEEEEEeecccCCCCcc
Q psy8774         351 ER------------R--LQKYGQYRYF------------------ETRDESYIGKRVERMEVRGRKGRGRPK  390 (427)
Q Consensus       351 ~~------------~--l~~~t~y~~~------------------~~~~~~~~~~~~~~v~a~~~~g~g~p~  390 (427)
                      ..            +  ......|.++                  .+-.|++..+|..-|.|.-..|..-|.
T Consensus       368 ~~e~~v~~~~N~C~g~~~~~~s~~v~c~y~hs~~~q~~~~~i~teTI~gL~PgssYlldv~a~~~~g~~lpy  439 (454)
T KOG4806|consen  368 QRERSVVDFTNYCMGFVPKRVSQYVYCEYMHSRERQQSPDNIETETILGLMPGSSYLLDVTANLSMGKPLPY  439 (454)
T ss_pred             chhhhhhhhhccccCccccceeEEEeEEEecChhhhcchhhhhhhhhcccccCceEEEEEEEcccCCccccc
Confidence            10            0  0011233222                  122367888899888888777666554

>TIGR00868 hCaCC calcium-activated chloride channel protein 1

Probab=89.89  E-value=29  Score=36.65  Aligned_cols=41  Identities=12%  Similarity=0.119  Sum_probs=31.0

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEec
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMT  226 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~  226 (427)
                      ||...++|++.. ....|.|+|+.|-.  +.|....|.|.+...
T Consensus       755 PP~rItDL~~~~-~~~~v~LsWTAPG~d~D~G~a~~y~ir~s~~  797 (863)
T TIGR00868       755 PPSKITDLEAGF-QGDNIILTWTAPGDVLDHGRADRYIIRISTS  797 (863)
T ss_pred             CCccceeeEEee-cCCEEEEEeeCCCccCCCCccceEEEEecCC
Confidence            455566777644 45569999999986  468899999999765

distributions. found a row in 1A13.INFO that was not parsed out

>PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators

Probab=89.24  E-value=1.6  Score=29.35  Aligned_cols=44  Identities=20%  Similarity=0.303  Sum_probs=26.1

Q ss_pred             EEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCC
Q psy8774         127 KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPG  171 (427)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~  171 (427)
                      .|+-.+....|.........+.+.+|.|| .|.|.|+|.+..|..
T Consensus        11 ~Y~l~g~d~~W~~~~~~~~~~~~~~L~~G-~Y~l~V~a~~~~~~~   54 (66)
T PF07495_consen   11 RYRLEGFDDEWITLGSYSNSISYTNLPPG-KYTLEVRAKDNNGKW   54 (66)
T ss_dssp             EEEEETTESSEEEESSTS-EEEEES--SE-EEEEEEEEEETTS-B
T ss_pred             EEEEECCCCeEEECCCCcEEEEEEeCCCE-EEEEEEEEECCCCCc
Confidence            34333223444443333339999999887 599999999987764

However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.

>KOG1225|consensus

Probab=88.50  E-value=2.1  Score=41.84  Aligned_cols=153  Identities=17%  Similarity=0.138  Sum_probs=94.1

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCC-
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA-  168 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~-  168 (427)
                      |.-+....-+..++.+.|...      .....|...+.....+.  ...........+.+..|.|+..|.++++++-.. 
T Consensus       369 ~~~~~~~~cs~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~  442 (525)
T KOG1225|consen  369 PSLLLITECSPPSLCIAGVGR------RRVTHCAGTYCPLGESGGDLQGRVPGDANSVDIQGLEPGDEYNCSVNTVAANI  442 (525)
T ss_pred             chhhcccccCCCceeeccccc------cccccccccccccccCCCccceeeccceeeeeeeeecCCcceeeehhhhhhhh
Confidence            334444455677788888722      23344555444422111  122333557888999999999999999987432 


Q ss_pred             CCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccce
Q psy8774         169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA  248 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (427)
                      |..+........     -..+..+.+.....+++.+.|..|.   ....++.+.+....  .....              
T Consensus       443 ~~~~~~~~~~~~-----~~~~g~~~v~~~~~~s~e~~g~~~s---~~~~~~~~~~~~~~--~~~~~--------------  498 (525)
T KOG1225|consen  443 GSLPKDKSETTV-----LCWNGGLCVDGETESSLEVGGPCPS---SGTCGWEVRCGPCG--NDGGV--------------  498 (525)
T ss_pred             ccCCcccccceE-----eecCCceeeeeeeeccccccCCCCC---ccccceEEEeeecC--ccccc--------------
Confidence            222222222221     2466778888889999999999998   55677888773321  11111              


Q ss_pred             eEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEE
Q psy8774         249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAV  289 (427)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V  289 (427)
                                     ........+.+...+|.|++.|.+.+
T Consensus       499 ---------------~~~~~~~~~~~~~~~l~~c~~~~~~~  524 (525)
T KOG1225|consen  499 ---------------NAEPPPECTSYDRTGLGPCTEYEVSV  524 (525)
T ss_pred             ---------------ccCCCCCCCCCCccCcccccceeccc
Confidence                           11222356678889999999998865

>KOG4228|consensus

Probab=87.34  E-value=1.5  Score=46.13  Aligned_cols=80  Identities=11%  Similarity=-0.044  Sum_probs=50.1

Q ss_pred             eeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCC
Q psy8774          94 NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPW  173 (427)
Q Consensus        94 ~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~  173 (427)
                      ...++.....++...|.....     ...-|.+.++....+ ................+.+...|.+  .+.|..|.+.+
T Consensus        30 ~~~vt~~~~~~~~~~~~~~~t-----~~~~y~v~~~~~~s~-~~~~~~~~~~~~s~~~~~~~~~~~~--~evnt~~~a~~  101 (1087)
T KOG4228|consen   30 TPNVTGSTATSWVQAELLGST-----WPNYYQVIFKALSSG-YGYIDVDLTTRLSYPCLSPPSFLEL--VEVNTIGRAPF  101 (1087)
T ss_pred             CcccccccccceeehhhccCC-----ChhhhheeeeEeccC-cceeeccceeecccCCCCCcchhhh--hhccccccccc
Confidence            445566677788888887742     344677777665333 2222222244456666777777777  77777777777


Q ss_pred             CCCeEEEc
Q psy8774         174 SPKLSLMT  181 (427)
Q Consensus       174 s~~~~~~t  181 (427)
                      +.++.-++
T Consensus       102 ~~~~~~rt  109 (1087)
T KOG4228|consen  102 QCPVAPRT  109 (1087)
T ss_pred             ccccCCcc
Confidence            76666555

>KOG1225|consensus

Probab=86.90  E-value=1.2  Score=43.39  Aligned_cols=145  Identities=14%  Similarity=-0.010  Sum_probs=89.4

Q ss_pred             CccceEEEEEeeCCCCCCCcceEeEEEEEEecCcc--ceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEE
Q psy8774           4 EEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTL--KENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYY   81 (427)
Q Consensus         4 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~   81 (427)
                      ..++.++.+.|..    ......|...|.......  -....+.....+.+..|.|++.|..+++++-..-.+.......
T Consensus       376 ~cs~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~  451 (525)
T KOG1225|consen  376 ECSPPSLCIAGVG----RRRVTHCAGTYCPLGESGGDLQGRVPGDANSVDIQGLEPGDEYNCSVNTVAANIGSLPKDKSE  451 (525)
T ss_pred             ccCCCceeecccc----ccccccccccccccccCCCccceeeccceeeeeeeeecCCcceeeehhhhhhhhccCCccccc
Confidence            4455666777772    223344555554422221  1222277788899999999999999999985433332222222


Q ss_pred             eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEccCCCCcEEE
Q psy8774          82 TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSNLEEGIEYS  159 (427)
Q Consensus        82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~t~Y~  159 (427)
                      .+..    ..+..+.+......++.+.|..|.     ....++.+.+... ...-..  ......+.+...+|.|++.|.
T Consensus       452 ~~~~----~~~g~~~v~~~~~~s~e~~g~~~s-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~c~~~~  521 (525)
T KOG1225|consen  452 TTVL----CWNGGLCVDGETESSLEVGGPCPS-----SGTCGWEVRCGPC-GNDGGVNAEPPPECTSYDRTGLGPCTEYE  521 (525)
T ss_pred             ceEe----ecCCceeeeeeeeccccccCCCCC-----ccccceEEEeeec-CcccccccCCCCCCCCCCccCccccccee
Confidence            2221    235677888889999999999985     3455677777332 111111  112356778888999999998


Q ss_pred             EEE
Q psy8774         160 AEV  162 (427)
Q Consensus       160 ~~V  162 (427)
                      +.+
T Consensus       522 ~~~  524 (525)
T KOG1225|consen  522 VSV  524 (525)
T ss_pred             ccc
Confidence            765

>PF09240 IL6Ra-bind: Interleukin-6 receptor alpha chain, binding; InterPro: IPR015321 Members of this entry adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology

Probab=85.36  E-value=9.9  Score=28.08  Aligned_cols=39  Identities=13%  Similarity=0.312  Sum_probs=29.8

Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecc
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTA  227 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~  227 (427)
                      .|++|.+...+...+..+|.+-... -.-..|.++|+...
T Consensus         1 ~~~nlsC~~~~~~~m~CtW~~g~~~-~~~t~y~L~~~~~~   39 (99)
T PF09240_consen    1 KPQNLSCFIYNLEYMNCTWEPGKEA-PPDTQYTLYYWYSP   39 (99)
T ss_dssp             S-EEEEEEEETTTEEEEEEECCTTC-STTEEEEEEEEETT
T ss_pred             CCeeCEEEEECCEEEEEEECCCCCC-CCcccEEEEEEcCC
Confidence            3678999888899999999875532 24478999999874

They are required for binding to the cytokine Interleukin-6 []. ; PDB: 1N26_A 1P9M_C 3LB6_C 1PVH_A 3L5H_A 1BQU_A 1I1R_A 3QT2_B 3BPN_C 3BPO_C ....

>PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators

Probab=84.46  E-value=9.2  Score=25.53  Aligned_cols=37  Identities=24%  Similarity=0.218  Sum_probs=24.7

Q ss_pred             ccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCc
Q psy8774          37 TLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQ   75 (427)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~   75 (427)
                      ..|.... .....+.+++|.|| .|.|.|+|.+..|...
T Consensus        19 ~~W~~~~-~~~~~~~~~~L~~G-~Y~l~V~a~~~~~~~~   55 (66)
T PF07495_consen   19 DEWITLG-SYSNSISYTNLPPG-KYTLEVRAKDNNGKWS   55 (66)
T ss_dssp             SSEEEES-STS-EEEEES--SE-EEEEEEEEEETTS-B-
T ss_pred             CeEEECC-CCcEEEEEEeCCCE-EEEEEEEEECCCCCcC
Confidence            4576653 22229999999999 6999999999887554

However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	427
2edy_A	103	Solution Structures Of The Fn3 Domain Of Human Rece		8e-07
3f7r_A	249	First Pair Of Fibronectin Type Iii Domains And Part		1e-05
3f7p_C	248	Crystal Structure Of A Complex Between Integrin Bet		1e-05
3f7q_A	234	First Pair Of Fibronectin Type Iii Domains And Part		1e-05
2dn7_A	107	Solution Structures Of The 6th Fn3 Domain Of Human		1e-05
1qg3_A	195	Crystal Structure Of A Tandem Pair Of Fibronectin T		1e-05
1x5h_A	132	The Solution Structure Of The Third Fibronectin Typ		1e-05
1x5h_A	132	The Solution Structure Of The Third Fibronectin Typ		2e-05
1fnf_A	368	Fragment Of Human Fibronectin Encompassing Type-Iii		5e-04

>pdb|2EDY|A Chain A, Solution Structures Of The Fn3 Domain Of Human Receptor- Type Tyrosine-Protein Phosphatase F Length = 103

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 107 ITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAIT 166
           + WDPP+   RNG+I+ Y V F + I++   +   TT T+   + L+    Y  +V+A T
Sbjct: 27  LAWDPPVLAERNGRIISYTVVF-RDINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWT 85
Query: 167 KAGPGPWSPKL 177
             G GP SP +
Sbjct: 86  SKGSGPLSPSI 96

>pdb|3F7R|A Chain A, First Pair Of Fibronectin Type Iii Domains And Part Of The Connecting Segment Of The Integrin Beta4 Length = 249

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 13/171 (7%)
Query: 10  IELVWSQPTQTYGEILGYRVKYGVREHTLKE-NLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           I   W  P+   G+ +GYRVKY ++  +  E +L++SK  S  +TNL    +YE ++   
Sbjct: 22  IHFNWLPPS---GKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAY 78
Query: 69  NHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKF 128
              G G  +                 ++ +  +  V  ++W  P  T  NG+I  Y V +
Sbjct: 79  GAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAET--NGEITAYEVCY 136
Query: 129 HKKIDAN-------NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGP 172
               D N        V+  N      +  NL E   Y   V+A   AG GP
Sbjct: 137 GLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGP 187

>pdb|3F7P|C Chain C, Crystal Structure Of A Complex Between Integrin Beta4 And Plectin Length = 248

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 13/171 (7%)
Query: 10  IELVWSQPTQTYGEILGYRVKYGVREHTLKE-NLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           I   W  P+   G+ +GYRVKY ++  +  E +L++SK  S  +TNL    +YE ++   
Sbjct: 21  IHFNWLPPS---GKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAY 77
Query: 69  NHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKF 128
              G G  +                 ++ +  +  V  ++W  P  T  NG+I  Y V +
Sbjct: 78  GAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAET--NGEITAYEVCY 135
Query: 129 HKKIDAN-------NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGP 172
               D N        V+  N      +  NL E   Y   V+A   AG GP
Sbjct: 136 GLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGP 186

>pdb|3F7Q|A Chain A, First Pair Of Fibronectin Type Iii Domains And Part Of The Connecting Segment Of The Integrin Beta4 Length = 234

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 13/171 (7%)
Query: 10  IELVWSQPTQTYGEILGYRVKYGVREHTLKE-NLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           I   W  P+   G+ +GYRVKY ++  +  E +L++SK  S  +TNL    +YE ++   
Sbjct: 22  IHFNWLPPS---GKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAY 78
Query: 69  NHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKF 128
              G G  +                 ++ +  +  V  ++W  P  T  NG+I  Y V +
Sbjct: 79  GAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAET--NGEITAYEVCY 136
Query: 129 HKKIDAN-------NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGP 172
               D N        V+  N      +  NL E   Y   V+A   AG GP
Sbjct: 137 GLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGP 187

>pdb|2DN7|A Chain A, Solution Structures Of The 6th Fn3 Domain Of Human Receptor- Type Tyrosine-Protein Phosphatase F Length = 107

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
          T  L W  P +  GE+LGYR++Y  R    + N ++    +  F +T L +G  Y FR+A
Sbjct: 22 TALLQWHPPKELPGELLGYRLQY-CRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLA 80
Query: 67 GQNHIGYGQE 76
           +N  G G+E
Sbjct: 81 AKNRAGLGEE 90

>pdb|1QG3|A Chain A, Crystal Structure Of A Tandem Pair Of Fibronectin Type Iii Domains From The Cytoplasmic Tail Of Integrin Alpha6 Beta4 Length = 195

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 13/171 (7%)
Query: 10  IELVWSQPTQTYGEILGYRVKYGVREHTLKE-NLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           I   W  P+   G+ +GYRVKY ++  +  E +L++SK  S  +TNL    +YE ++   
Sbjct: 18  IHFNWLPPS---GKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAY 74
Query: 69  NHIGYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKF 128
              G G  +                 ++ +  +  V  ++W  P  T  NG+I  Y V +
Sbjct: 75  GAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAET--NGEITAYEVCY 132
Query: 129 HKKIDAN-------NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGP 172
               D N        V+  N      +  NL E   Y   V+A   AG GP
Sbjct: 133 GLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGP 183

>pdb|1X5H|A Chain A, The Solution Structure Of The Third Fibronectin Type Iii Domain Of Human Neogenin Length = 132

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 17  PTQTYGEILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYG 74
           P    G+I GY+++Y    R+  + E LV+   +S LI  L+RG EY FR+A     G G
Sbjct: 44  PATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTG 103
Query: 75  QET 77
             T
Sbjct: 104 PAT 106

>pdb|1X5H|A Chain A, The Solution Structure Of The Third Fibronectin Type Iii Domain Of Human Neogenin Length = 132

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 94  NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--NTTQTKAVFSN 151
           N+S   +    + I W PP    +NGQI  Y +++ K    ++V     + TQ   +   
Sbjct: 24  NLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEG 83
Query: 152 LEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
           L+ G EY+  V A+T  G GP +  LS  T
Sbjct: 84  LDRGTEYNFRVAALTINGTGPATDWLSAET 113

>pdb|1FNF|A Chain A, Fragment Of Human Fibronectin Encompassing Type-Iii Repeats 7 Through 10 Length = 368

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 14  WSQPTQTYGEILGYRVKYGVREHT--LKENLVNSKNMSFLITNLERGVEYEFRIAGQNHI 71
           W  P  T   I GYR+++     +   +E+ V     S  +TNL  G EY   I   N  
Sbjct: 206 WIAPRAT---ITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALN-- 260
Query: 72  GYGQETVRYYXXXXXXXXXXXANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK 131
             G+E                 ++     TP  + I+WD P  T R  +I       + +
Sbjct: 261 --GREESPLLIGQQSTVSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRIT------YGE 312
Query: 132 IDANNVIHRNT---TQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPK 176
              N+ +   T   +++ A  S L+ G++Y+  V A+T  G  P S K
Sbjct: 313 TGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASSK 360

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	427
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	7e-46
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	8e-36
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	2e-12
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	5e-44
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	8e-35
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	1e-26
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	7e-43
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	2e-33
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	1e-26
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	2e-10
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	4e-38
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	8e-31
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	1e-30
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	3e-30
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	8e-22
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	2e-37
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	1e-32
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	1e-27
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	3e-09
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	5e-36
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	9e-32
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	2e-18
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	8e-16
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	7e-35
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	2e-27
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	1e-20
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	8e-09
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	2e-34
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	4e-19
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	1e-09
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	2e-34
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	4e-30
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	3e-16
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	1e-07
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	3e-33
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	1e-32
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	3e-26
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	2e-15
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	9e-31
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	5e-30
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	9e-22
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	8e-12
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	8e-11
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	1e-30
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	1e-29
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	6e-16
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	2e-29
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	6e-21
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	1e-11
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	1e-27
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	2e-12
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	4e-11
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	5e-27
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	1e-16
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	5e-11
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	2e-26
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	5e-19
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	1e-10
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	3e-09
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	2e-25
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	1e-13
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	2e-09
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	3e-25
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	6e-21
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	3e-10
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	1e-06
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	8e-24
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	1e-20
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	5e-12
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	1e-23
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	1e-21
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	8e-14
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	3e-23
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	4e-18
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	7e-13
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	1e-07
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	8e-23
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	6e-22
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	5e-13
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	3e-07
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	1e-22
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	3e-19
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	1e-11
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	7e-22
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	4e-17
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	1e-09
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	1e-21
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	3e-15
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	3e-13
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	8e-05
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	5e-21
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	6e-18
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	3e-11
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	6e-21
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	2e-13
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	3e-07
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	1e-20
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	4e-14
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	1e-13
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	2e-20
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	5e-17
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	5e-11
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	4e-20
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	2e-14
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	2e-12
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	7e-20
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	1e-14
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	2e-12
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	7e-20
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	2e-14
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	3e-13
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	1e-19
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	2e-16
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	7e-15
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	1e-06
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	4e-19
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	2e-10
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	3e-09
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	5e-19
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	9e-18
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	2e-13
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	3e-05
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	9e-19
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	6e-16
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	1e-10
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	3e-18
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	2e-10
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	1e-07
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	7e-07
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	3e-18
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	7e-10
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	5e-07
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	1e-17
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	4e-12
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	2e-10
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	2e-17
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	4e-15
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	9e-09
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	3e-17
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	2e-14
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	5e-17
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	4e-16
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	2e-08
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	4e-05
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	2e-16
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	2e-16
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	2e-14
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	7e-04
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	3e-16
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	8e-16
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	5e-09
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	5e-16
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	1e-13
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	2e-13
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	9e-16
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	1e-12
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	2e-10
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	1e-15
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	2e-08
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	2e-08
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	1e-15
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	3e-13
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	1e-15
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	6e-13
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	1e-12
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	2e-15
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	2e-10
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	5e-15
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	1e-12
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	1e-11
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	6e-15
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	1e-14
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	4e-13
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	8e-15
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	2e-14
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	3e-09
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	2e-14
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	1e-13
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	1e-12
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	2e-14
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	6e-12
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	3e-14
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	2e-11
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	3e-14
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	7e-13
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	2e-11
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	2e-13
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	2e-05
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	2e-13
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	2e-12
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	6e-08
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	5e-13
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	4e-08
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	1e-05
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	6e-13
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	2e-08
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	1e-07
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	1e-12
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	3e-12
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	4e-04
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	1e-12
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	7e-11
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	2e-12
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	4e-12
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	6e-12
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	2e-12
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	1e-07
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	1e-05
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	8e-12
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	5e-11
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	4e-07
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	1e-11
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	1e-06
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	1e-11
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	8e-06
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	3e-05
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	1e-11
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	7e-09
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	2e-05
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	2e-11
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	7e-08
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	3e-11
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	2e-09
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	3e-11
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	5e-06
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	3e-11
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	5e-04
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	5e-11
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	1e-06
2crz_A	110	Fibronectin type-III domain containing protein 3A;	6e-11
2crz_A	110	Fibronectin type-III domain containing protein 3A;	5e-10
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	2e-10
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	2e-10
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	2e-09
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	2e-10
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	1e-07
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	5e-07
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	3e-10
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	3e-07
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	2e-06
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	4e-10
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	4e-08
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	2e-06
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	4e-10
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	4e-07
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	5e-10
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	9e-10
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	6e-06
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	5e-10
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	3e-09
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	5e-06
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	6e-10
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	6e-05
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	7e-10
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	1e-08
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	7e-10
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	2e-09
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	3e-04
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	9e-10
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	4e-08
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	1e-09
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	8e-09
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	1e-09
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	2e-07
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	4e-07
1iar_B	207	Protein (interleukin-4 receptor alpha chain); cyto	1e-09
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	3e-09
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	3e-09
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	5e-06
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	3e-09
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	1e-07
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	3e-04
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	4e-09
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	6e-06
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	8e-06
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	4e-09
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	2e-04
2erj_C	247	Cytokine receptor common gamma chain; immune syste	9e-09
2erj_C	247	Cytokine receptor common gamma chain; immune syste	4e-08
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	1e-08
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	3e-08
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	3e-07
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	1e-08
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	1e-08
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	4e-05
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	6e-04
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	2e-08
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	4e-06
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	2e-05
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	2e-08
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	2e-05
2crm_A	120	Fibronectin type-III domain containing protein 3A;	2e-08
2crm_A	120	Fibronectin type-III domain containing protein 3A;	9e-08
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	4e-08
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	2e-06
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	4e-08
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	4e-08
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	7e-08
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	1e-05
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	7e-04
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	2e-07
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	9e-05
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	2e-04
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	3e-07
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	2e-05
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	3e-07
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	4e-07
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	2e-06
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	5e-07
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	5e-06
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	1e-04
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	5e-07
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	7e-07
2csp_A	130	RIM-BP2, RIM binding protein 2; FN3 domain, struct	1e-06
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	1e-06
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	4e-06
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	1e-06
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	2e-06
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	1e-06
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	2e-06
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	2e-06
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	2e-06
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	8e-04
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	2e-06
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	4e-06
1y6k_R	214	Interleukin-10 receptor alpha chain; helix bundle,	3e-06
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	3e-06
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	3e-05
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	3e-06
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	8e-06
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	6e-05
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	4e-06
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	4e-04
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	5e-06
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	6e-06
3up1_A	223	Interleukin-7 receptor subunit alpha; cytokine rec	6e-06
3up1_A	223	Interleukin-7 receptor subunit alpha; cytokine rec	1e-04
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
3dlq_R	211	Interleukin-22 receptor subunit alpha-1; cytokine-	2e-04
1uc6_A	109	CNTF receptor, ciliary neurotrophic factor recepto	2e-04

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score =  168 bits (425), Expect = 7e-46
 Identities = 50/384 (13%), Positives = 105/384 (27%), Gaps = 47/384 (12%)

Query: 9   TIELVWSQPTQT-YGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
            + +  +  +    G I+   V+Y         +     + S+ I +L+   EYE  +  
Sbjct: 277 YLWIQLNANSINGDGPIVAREVEYC-TASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLL 335

Query: 68  QNHIGYGQ----ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
                 G       +R  T    P    P  +         + I W+P            
Sbjct: 336 TRPGEGGTGSPGPALRTRTKCADPM-RGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYN 394

Query: 124 YNVKFHKKIDANN------VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKL 177
             V +  ++                +  +   +NL      S ++  +   G    S +L
Sbjct: 395 LTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQEL 453

Query: 178 SLMTARDM-VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQ 236
            + T  D+    P      +T ++ + + W+      G I  Y+I Y   +  D +    
Sbjct: 454 IVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLS 513

Query: 237 KSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG 296
                                          +          L   T Y+  + A T  G
Sbjct: 514 NQ-----------------------SGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKG 550

Query: 297 LGRLSGK--VTVKVKPEDVPLSLRAH-DVSTHSMTLSWSPPIKLNP------VKYKEVSE 347
            G  +     T    P      L    + + +++T+   P            +  +E   
Sbjct: 551 FGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERP 610

Query: 348 KIQERRLQKYGQYRYFETRDESYI 371
           +  ++  +    Y        + +
Sbjct: 611 RRTKKTTEILKCYPVPIHFQNASL 634

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score =  138 bits (349), Expect = 8e-36
 Identities = 58/336 (17%), Positives = 93/336 (27%), Gaps = 33/336 (9%)

Query: 9   TIELVWSQPTQ--TYGEILGYRVKYGVR------EHTLKENLVNSKNMSFLITNLERGVE 60
            I + W       T        V Y  +                + +    ITNL     
Sbjct: 375 QITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTN 434

Query: 61  YEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ 120
              ++   N  G  +       T E  P   P          + + + W  P  T   G 
Sbjct: 435 VSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREP--TQTYGV 492

Query: 121 IVLYNVKF---------HKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPG 171
           I LY + +             + +  + +   +T  +F  L  G  YS  ++A T  G G
Sbjct: 493 ITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFG 552

Query: 172 PWSPKLSLMTARDMVRAP--LGVKALATSDQSVEVWWKPVPAGRGKILGYQIFY----TM 225
           P +      T       P       L  +D +V V  KP  +    +  YQI        
Sbjct: 553 PPATN-QFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPR 611

Query: 226 TAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTS------- 278
              +  +      +P+   +          A E   +  Q + P T     T        
Sbjct: 612 RTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTP 671

Query: 279 LEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP 314
           L  +  Y +   A +          V V  K    P
Sbjct: 672 LLPYKSYRIYFQAASRANGETKIDCVQVATKGAATP 707

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score = 67.9 bits (165), Expect = 2e-12
 Identities = 37/284 (13%), Positives = 73/284 (25%), Gaps = 47/284 (16%)

Query: 61  YEFRIAGQNHIGY---GQETVRYYTTPEGPPTGPPANIS-HHFQTPDVVCITWDPPLRTH 116
             F +    H GY    +  V  +     P      N+  +  Q     C      +   
Sbjct: 137 VIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGD 196

Query: 117 RNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPK 176
           R    +         +    V             N  +           T+ G G  +  
Sbjct: 197 RL--WLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYA 254

Query: 177 LSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPA-GRGKILGYQIFYTMTAVEDLDEWS 235
             ++    +  AP  + +       + +        G G I+  ++ Y   +        
Sbjct: 255 ELVVKEPPVPIAPPQLAS--VGATYLWIQLNANSINGDGPIVAREVEYCTAS-------- 304

Query: 236 QKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN 295
                                      W+ +    + S ++  L+  TEY ++V      
Sbjct: 305 -------------------------GSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPG 339

Query: 296 GLGR--LSGKVTVKVKPEDV---PLSLRAHDVSTHSMTLSWSPP 334
             G       +  + K  D    P  L   +V +  +T+ W P 
Sbjct: 340 EGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPF 383

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score =  156 bits (396), Expect = 5e-44
 Identities = 62/329 (18%), Positives = 107/329 (32%), Gaps = 50/329 (15%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
            + + W + T    +I GYR+       ++    E +V++   S    NL  G+EY   +
Sbjct: 18  VLTVSWERSTT--PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSV 75

Query: 66  AGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYN 125
                           T     P  PP ++      PD + +TW PP        +V Y+
Sbjct: 76  YTVKDDKESVPIS--DTIIPAVP--PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYS 131

Query: 126 VKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDM 185
               K  +    +  + +    V +NL  G EY   V ++ +               +  
Sbjct: 132 P--VKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR----GRQKTG 185

Query: 186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS 245
           + +P G+     +  S  V W         I GY+I +            +  +P + + 
Sbjct: 186 LDSPTGIDFSDITANSFTVHWIAPR---ATITGYRIRH--HPEHFSGRPREDRVPHSRN- 239

Query: 246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT 305
                                      S  LT+L   TEY V++ A        L   + 
Sbjct: 240 ---------------------------SITLTNLTPGTEYVVSIVALNGREESPLL--IG 270

Query: 306 VKVKPEDVPLSLRAHDVSTHSMTLSWSPP 334
            +    DVP  L     +  S+ +SW  P
Sbjct: 271 QQSTVSDVPRDLEVVAATPTSLLISWDAP 299

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score =  131 bits (332), Expect = 8e-35
 Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 53/306 (17%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           T+ + W+ P     ++  + V+Y     E  + E  ++  + + ++TNL  G EY   ++
Sbjct: 110 TMRVTWAPPPS--IDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVS 167

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
                           T    PT     I     T +   + W  P        I  Y +
Sbjct: 168 SVYEQHESTPLRGRQKTGLDSPT----GIDFSDITANSFTVHWIAP-----RATITGYRI 218

Query: 127 KFHKK--IDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
           + H +             ++     +NL  G EY   + A+      P            
Sbjct: 219 RHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIG----QQST 274

Query: 185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTES 244
           +   P  ++ +A +  S+ + W         +  Y+I Y        +   Q+       
Sbjct: 275 VSDVPRDLEVVAATPTSLLISWDAPA---VTVRYYRITYG---ETGGNSPVQEFTVPGSK 328

Query: 245 SNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK- 303
           S                           +A ++ L+   +Y + V A T  G    S K 
Sbjct: 329 S---------------------------TATISGLKPGVDYTITVYAVTGRGDSPASSKP 361

Query: 304 VTVKVK 309
           +++  +
Sbjct: 362 ISINYR 367

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score =  109 bits (273), Expect = 1e-26
 Identities = 43/251 (17%), Positives = 82/251 (32%), Gaps = 46/251 (18%)

Query: 88  PTGPPANIS-HHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR---NTT 143
           P  PP N+         V+ ++W+          I  Y +                 +  
Sbjct: 1   PLSPPTNLHLEANPDTGVLTVSWERS----TTPDITGYRITTTPTNGQQGNSLEEVVHAD 56

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVE 203
           Q+   F NL  G+EY+  V  +               T    V  P  ++       ++ 
Sbjct: 57  QSSCTFDNLSPGLEYNVSVYTVKDDKESVPIS----DTIIPAVPPPTDLRFTNIGPDTMR 112

Query: 204 VWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW 263
           V W P P+    +  + + Y+    E  ++ ++ SI  +++                   
Sbjct: 113 VTWAPPPS--IDLTNFLVRYSPVKNE--EDVAELSISPSDN------------------- 149

Query: 264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVS 323
                    +  LT+L   TEY V+V++  V      +     +    D P  +   D++
Sbjct: 150 ---------AVVLTNLLPGTEYVVSVSS--VYEQHESTPLRGRQKTGLDSPTGIDFSDIT 198

Query: 324 THSMTLSWSPP 334
            +S T+ W  P
Sbjct: 199 ANSFTVHWIAP 209

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score =  153 bits (389), Expect = 7e-43
 Identities = 55/331 (16%), Positives = 105/331 (31%), Gaps = 53/331 (16%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
            + + W + T    +I GYR+       ++    E +V++   S    NL  G+EY   +
Sbjct: 19  VLTVSWERSTT--PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSV 76

Query: 66  AGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYN 125
                           T     P     ++S    T   + + W P      +  I+ Y 
Sbjct: 77  YTVKDDKESVPI--SDTIIPEVP--QLTDLSFVDITDSSIGLRWTPL----NSSTIIGYR 128

Query: 126 VKFHKKIDANNVIHR--NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
           +      +   +     +++      + LE GI+Y   V  +   G    +      T +
Sbjct: 129 ITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTL----TQQ 184

Query: 184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTE 243
             V  P  ++       ++ V W P P+    +  + + Y+    E+       S     
Sbjct: 185 TAVPPPTDLRFTNIGPDTMRVTWAPPPS--IDLTNFLVRYSPVKNEEDVAELSISPSDN- 241

Query: 244 SSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK 303
                                        +  LT+L   TEY V+V++           +
Sbjct: 242 -----------------------------AVVLTNLLPGTEYVVSVSSVYEQHESTPL-R 271

Query: 304 VTVKVKPEDVPLSLRAHDVSTHSMTLSWSPP 334
              K    D P  +   D++ +S T+ W  P
Sbjct: 272 GRQKTGL-DSPTGIDFSDITANSFTVHWIAP 301

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score =  128 bits (323), Expect = 2e-33
 Identities = 61/298 (20%), Positives = 104/298 (34%), Gaps = 53/298 (17%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT--LKENLVNSKNMSFLITNLERGVEYEFRIA 66
           +I L W+        I+GYR+          + E+ V+S    + +T LE G++Y+  + 
Sbjct: 111 SIGLRWTPLNS--STIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVI 168

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
              + G    T     T   PPT    ++      PD + +TW PP     +  +  + V
Sbjct: 169 TLINGGESAPTTLTQQTAVPPPT----DLRFTNIGPDTMRVTWAPP----PSIDLTNFLV 220

Query: 127 KFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
           ++    +  +V   +   +    V +NL  G EY   V ++ +        +    T  D
Sbjct: 221 RYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL-RGRQKTGLD 279

Query: 185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTES 244
              +P G+     +  S  V W      R  I GY+I +     E      +        
Sbjct: 280 ---SPTGIDFSDITANSFTVHWIAP---RATITGYRIRHH---PEHFSGRPR-------- 322

Query: 245 SNIARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGRLS 301
                               +  VP +  S  LT+L   TEY V++ A        L 
Sbjct: 323 --------------------EDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLL 360

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score =  109 bits (273), Expect = 1e-26
 Identities = 41/252 (16%), Positives = 76/252 (30%), Gaps = 48/252 (19%)

Query: 88  PTGPPANIS-HHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN---VIHRNTT 143
           P  PP N+         V+ ++W+          I  Y +                 +  
Sbjct: 2   PLSPPTNLHLEANPDTGVLTVSWERS----TTPDITGYRITTTPTNGQQGNSLEEVVHAD 57

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVE 203
           Q+   F NL  G+EY+  V  +               T    V     +  +  +D S+ 
Sbjct: 58  QSSCTFDNLSPGLEYNVSVYTVKDDKESVP----ISDTIIPEVPQLTDLSFVDITDSSIG 113

Query: 204 VWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW 263
           + W P+ +    I+GY+I                                  A  +    
Sbjct: 114 LRWTPLNSST--IIGYRITV-------------------------------VAAGEGIPI 140

Query: 264 SQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDV 322
            +  V  +     +T LE   +Y ++V      G    +     +      P  LR  ++
Sbjct: 141 FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPT--TLTQQTAVPPPTDLRFTNI 198

Query: 323 STHSMTLSWSPP 334
              +M ++W+PP
Sbjct: 199 GPDTMRVTWAPP 210

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 61.4 bits (149), Expect = 2e-10
 Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 5/83 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT--LKENLVNSKNMSFLITNLERGVEYEFRIA 66
           +  + W  P      I GYR+++     +   +E+ V     S  +TNL  G EY   I 
Sbjct: 293 SFTVHWIAPR---ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIV 349

Query: 67  GQNHIGYGQETVRYYTTPEGPPT 89
             N        +   +T      
Sbjct: 350 ALNGREESPLLIGQQSTVSAHHH 372

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score =  144 bits (365), Expect = 4e-38
 Identities = 57/342 (16%), Positives = 100/342 (29%), Gaps = 54/342 (15%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY----GVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
            ++L W+ P+     IL Y ++Y          +      S   SF + +L+   EY FR
Sbjct: 216 ILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFR 275

Query: 65  IAGQNHIGYGQET----VRYYTTPEGPPTGPPANI----SHHFQTPDVVCITWDPPLRTH 116
           I      G G  +         T E  P+  P+        H Q    V + W       
Sbjct: 276 IRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFE 335

Query: 117 RNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPK 176
            NG+I+ Y V   +          N T+     +       Y A +      G    +  
Sbjct: 336 ANGKILDYEVTLTRWKSHLQNYTVNATK----LTVNLTNDRYLATLTVRNLVGKSDAAV- 390

Query: 177 LSLMTARDMVRAPLGVKALATSDQSVEV-WWKPVPAGRGKILGYQIFYTMTAVEDLDEWS 235
           L++         P+        D  + V W  P  + +  IL + +              
Sbjct: 391 LTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLS----------DK 440

Query: 236 QKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN 295
              I                      +W Q+   +  +    +L +   Y + V     +
Sbjct: 441 APCIT---------------------DWQQEDGTVHRTYLRGNLAESKCYLITVTPVYAD 479

Query: 296 GLGRLSGKVTVKVKPEDVPL---SLRAHDVSTHSMTLSWSPP 334
           G G     +   +  +  P    ++R   V  +   L W   
Sbjct: 480 GPGSPE-SIKAYL-KQAPPSKGPTVRTKKVGKNEAVLEWDQL 519

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score =  123 bits (310), Expect = 8e-31
 Identities = 49/345 (14%), Positives = 106/345 (30%), Gaps = 58/345 (16%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
            +   W    +T+ E   + +K      +    +   ++     +  +    V  E  + 
Sbjct: 118 KMRCEWDGGRETHLET-NFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVE 176

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHF--QTPDVVCITWDPPLRTHRNGQIVLY 124
            +N +G        +         PP N+S     +   ++ +TW  P  + ++  I+ Y
Sbjct: 177 AENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNP--SIKSVIILKY 234

Query: 125 NVKFHKKIDAN----NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLM 180
           N+++  K  +           +T++     +L+   EY   ++ + + G G WS      
Sbjct: 235 NIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEA 294

Query: 181 TARDMVRAPLG--------VKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVED 230
           +       P            +     ++V++ WK +P     GKIL Y++  T      
Sbjct: 295 SGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLT------ 348

Query: 231 LDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVA 290
              W                                +V  T   +LT       Y   + 
Sbjct: 349 --RWKS-------------------------HLQNYTVNAT---KLTVNLTNDRYLATLT 378

Query: 291 ARTVNGLGRLSG-KVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPP 334
            R + G    +   +         P+         + + + W+ P
Sbjct: 379 VRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTP 423

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score =  123 bits (309), Expect = 1e-30
 Identities = 30/177 (16%), Positives = 61/177 (34%), Gaps = 4/177 (2%)

Query: 9   TIELVWSQPTQTY-GEILGYRVKYGVREHTLKENLVN-SKNMSFLITNLERGVEYEFRIA 66
            + + W+ P ++    IL + V              + + + ++L  NL     Y   + 
Sbjct: 415 MLWVEWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVT 474

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
                G G          + PP+  P  +       +   + WD      +NG I  Y +
Sbjct: 475 PVYADGPGSPESIKAYLKQAPPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTI 533

Query: 127 KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
            +   I     ++ +++ T+   S+L     Y   + A T  G     P+ +  T +
Sbjct: 534 FYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKD-GPEFTFTTPK 589

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score =  122 bits (306), Expect = 3e-30
 Identities = 55/295 (18%), Positives = 90/295 (30%), Gaps = 44/295 (14%)

Query: 9   TIELVWSQ--PTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           T++LVW    P +  G+IL Y V     +  L+   VN+  ++  +TN      Y   + 
Sbjct: 323 TVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLTVNLTN----DRYLATLT 378

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
            +N +G     V      +   T P  ++       +++ + W  P  + +   I+ + V
Sbjct: 379 VRNLVGKSDAAVLTIPACDFQATHPVMDLKAFP-KDNMLWVEWTTPRESVK-KYILEWCV 436

Query: 127 KFHKKIDANN-VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDM 185
              K     +      T     +  NL E   Y   V  +   GPG           +  
Sbjct: 437 LSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESI-KAYLKQAP 495

Query: 186 VRAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTE 243
                 V+          + W  +P     G I  Y IFY                    
Sbjct: 496 PSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYR------------------- 536

Query: 244 SSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
                            +E +           L+SL   T Y V +AA T  G  
Sbjct: 537 -------------TIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGK 578

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score = 97.0 bits (241), Expect = 8e-22
 Identities = 52/343 (15%), Positives = 93/343 (27%), Gaps = 48/343 (13%)

Query: 8   VTIELVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERG-VEYEF 63
            T   V  +    Y  +    + +          +  ++N    S   T++    ++   
Sbjct: 21  FTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTC 80

Query: 64  RIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
            I     +    + V   T   G P   P N+S        +   WD    TH      L
Sbjct: 81  NILTFGQLE---QNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTL 137

Query: 124 YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
              ++     A+    R+T  +  V  +    +     V+A    G             +
Sbjct: 138 K-SEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYK 196

Query: 184 DMVRAPLGVKALATSDQSVEVW--WKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPL 241
                P  +  + + + S  +   W         IL Y I Y     +D   WSQ     
Sbjct: 197 VKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRT---KDASTWSQIPPED 253

Query: 242 TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
           T S+                           S  +  L+ FTEY   +     +G G  S
Sbjct: 254 TAST-------------------------RSSFTVQDLKPFTEYVFRIRCMKEDGKGYWS 288

Query: 302 ---GKVTVKVKPE-------DVPLSLRAHDVSTHSMTLSWSPP 334
               + +     +              +H     ++ L W   
Sbjct: 289 DWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTL 331

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score =  136 bits (344), Expect = 2e-37
 Identities = 56/295 (18%), Positives = 91/295 (30%), Gaps = 44/295 (14%)

Query: 9   TIELVWS--QPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           T++LVW    P +  G+IL Y V     +  L+   VN+  ++  +TN      Y   + 
Sbjct: 24  TVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLTVNLTNDR----YLATLT 79

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
            +N +G     V      +   T P  ++   F   +++ + W  P  +     I+ + V
Sbjct: 80  VRNLVGKSDAAVLTIPACDFQATHPVMDL-KAFPKDNMLWVEWTTPRESV-KKYILEWCV 137

Query: 127 KFHKKIDANNVIHRNTTQTKAVF-SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDM 185
              K     +    + T  +     NL E   Y   V  +   GPG           +  
Sbjct: 138 LSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESI-KAYLKQAP 196

Query: 186 VRAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTE 243
                 V+          + W  +P     G I  Y IFY                 +  
Sbjct: 197 PSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYR--------TIIGNETAVNV 248

Query: 244 SSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
            S+                             L+SL   T Y V +AA T  G  
Sbjct: 249 DSS------------------------HTEYTLSSLTSDTLYMVRMAAYTDEGGK 279

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score =  123 bits (311), Expect = 1e-32
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 10/178 (5%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTL-----KENLVNSKNMSFLITNLERGVEYEF 63
            + + W+ P      +  Y +++ V           +    + + ++L  NL     Y  
Sbjct: 116 MLWVEWTTPR---ESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLI 172

Query: 64  RIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
            +      G G          + PP+  P  +       +   + WD      +NG I  
Sbjct: 173 TVTPVYADGPGSPESIKAYLKQAPPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRN 231

Query: 124 YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
           Y + +   I     ++ +++ T+   S+L     Y   + A T  G     P+ +  T
Sbjct: 232 YTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKD-GPEFTFTT 288

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score =  110 bits (276), Expect = 1e-27
 Identities = 34/254 (13%), Positives = 68/254 (26%), Gaps = 40/254 (15%)

Query: 84  PEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTT 143
           P   P+        H Q    V + W        NG+I+ Y V   +          N T
Sbjct: 4   PSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNAT 63

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVE 203
           +     +N      Y A +      G    +               + +KA    +  + 
Sbjct: 64  KLTVNLTND----RYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDN-MLW 118

Query: 204 VWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW 263
           V W         +  Y + + + + +                              + +W
Sbjct: 119 VEWTTPR---ESVKKYILEWCVLSDKA---------------------------PCITDW 148

Query: 264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPL---SLRAH 320
            Q+   +  +    +L +   Y + V     +G G     +   +  +  P    ++R  
Sbjct: 149 QQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SIKAYL-KQAPPSKGPTVRTK 206

Query: 321 DVSTHSMTLSWSPP 334
            V  +   L W   
Sbjct: 207 KVGKNEAVLEWDQL 220

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 9   TIELVWSQP--TQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
              L W Q       G I  Y + Y           V+S +  + +++L     Y  R+A
Sbjct: 212 EAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMA 271

Query: 67  GQNHIGYGQETVRYYTTPE 85
                G        +TTP+
Sbjct: 272 AYTDEGGKDGPEFTFTTPK 290

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score =  131 bits (331), Expect = 5e-36
 Identities = 43/261 (16%), Positives = 82/261 (31%), Gaps = 40/261 (15%)

Query: 85  EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-NTT 143
                G P N +        +   W PP     +G+ + Y VK+  + D+ +  H  ++ 
Sbjct: 2   SHMDLGAPQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDSK 56

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVE 203
                 +NL    +Y  +V A    G GP+S  +S  T +++   P  +     S    +
Sbjct: 57  VPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQ 116

Query: 204 VWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW 263
           + W       G+I  Y++ Y +   ++      K + +                      
Sbjct: 117 LSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPK------------------ 158

Query: 264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLS------L 317
                       + +L +   Y   V AR   G G     +         P+S      +
Sbjct: 159 -------NRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIPDI 211

Query: 318 RAHDVSTHSMTLS---WSPPI 335
              D  +     S   +S  +
Sbjct: 212 PIVDAQSGEDYDSFLMYSDDV 232

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score =  119 bits (301), Expect = 9e-32
 Identities = 51/218 (23%), Positives = 85/218 (38%), Gaps = 23/218 (10%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT-LKENLVNSKNMSFLITNLERGVEYEFRIAG 67
            I   W  P+   G+ +GYRVKY ++  +  + +L++SK  S  +TNL    +YE ++  
Sbjct: 21  KIHFNWLPPS---GKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCA 77

Query: 68  QNHIGYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
               G G  + +    T +  P   P  ++ +  +  V  ++W  P     NG+I  Y V
Sbjct: 78  YGAQGEGPYSSLVSCRTHQEVP-SEPGRLAFNVVSSTVTQLSWAEPA--ETNGEITAYEV 134

Query: 127 KFHKKIDANN-------VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
            +    D N        V+  N      +  NL E   Y   V+A   AG GP    +  
Sbjct: 135 CYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIIN 194

Query: 180 MTARDMV--RAPLGVKALATSDQSVE------VWWKPV 209
           +  +       P+         QS E      ++   V
Sbjct: 195 LATQPKRPMSIPIIPDIPIVDAQSGEDYDSFLMYSDDV 232

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score = 82.9 bits (205), Expect = 2e-18
 Identities = 39/171 (22%), Positives = 59/171 (34%), Gaps = 46/171 (26%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
           AP    A A   + +   W P     GK +GY++ Y          W Q           
Sbjct: 8   APQNPNAKAAGSRKIHFNWLPPS---GKPMGYRVKY----------WIQGD--------- 45

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV 306
                         E     +     S ELT+L  + +Y + V A    G G  S  V+ 
Sbjct: 46  -------------SESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSC 92

Query: 307 KVKPEDVP---LSLRAHDVSTHSMTLSWSPPIKLN------PVKYKEVSEK 348
           +   ++VP     L  + VS+    LSW+ P + N       V Y  V++ 
Sbjct: 93  RT-HQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDD 142

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score = 75.6 bits (186), Expect = 8e-16
 Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 15/121 (12%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT-------LKENLVNSKNMSFLITNLERGVEY 61
             +L W++P +T GEI  Y V YG+            K  + N KN   LI NL     Y
Sbjct: 114 VTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPY 173

Query: 62  EFRIAGQNHIGYGQ--ETVRYYTTPEGPPTGPPA-----NISHHFQTPDVVCITW-DPPL 113
            + +  +N  G+G   E +    T    P   P       +           + + D  L
Sbjct: 174 RYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPIVDAQSGEDYDSFLMYSDDVL 233

Query: 114 R 114
           R
Sbjct: 234 R 234

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score =  129 bits (327), Expect = 7e-35
 Identities = 49/296 (16%), Positives = 87/296 (29%), Gaps = 57/296 (19%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
              + W+ P     ++    +KYG+   E       +      + +  L  G  YE  I+
Sbjct: 30  VAFVEWTPPR---AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSIS 86

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
                     +   +TT    P     N+    +T   + + WD         +   Y V
Sbjct: 87  AVRGTNESDASSTQFTTEIDAPK----NLRVGSRTATSLDLEWDNS-----EAEAQEYKV 137

Query: 127 KF----HKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
            +     ++     V       TK   ++L  G EY   + A+  +     +     M A
Sbjct: 138 VYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPAT----MNA 193

Query: 183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLT 242
           R  + +P  +   A+S+ S+ + W       G I  Y+I +T                  
Sbjct: 194 RTELDSPRDLMVTASSETSISLIWTKAS---GPIDHYRITFT------------------ 232

Query: 243 ESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
                                         S  LT LE   EY +++ A       
Sbjct: 233 --------------PSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQS 274

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score =  109 bits (274), Expect = 2e-27
 Identities = 41/256 (16%), Positives = 72/256 (28%), Gaps = 46/256 (17%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN--VIH 139
                P    P  I     +  V  + W PP       ++    +K+             
Sbjct: 8   GGGGIPVIDGPTQILVRDVSDTVAFVEWTPP-----RAKVDFILLKYGLVGGEGGKTTFR 62

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSD 199
                ++     L  G  Y   + A+        S           + AP  ++  + + 
Sbjct: 63  LQPPLSQYSVQALRPGSRYEVSISAVRGTNESDASST----QFTTEIDAPKNLRVGSRTA 118

Query: 200 QSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVED 259
            S+++ W        +   Y++ Y+  A E   E                          
Sbjct: 119 TSLDLEWDNSE---AEAQEYKVVYSTLAGEQYHE-------------------------- 149

Query: 260 LDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK-PEDVPLSLR 318
                 K +  T    LT L   TEY V ++A   +     S   T+  +   D P  L 
Sbjct: 150 --VLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSK---QSIPATMNARTELDSPRDLM 204

Query: 319 AHDVSTHSMTLSWSPP 334
               S  S++L W+  
Sbjct: 205 VTASSETSISLIWTKA 220

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 90.3 bits (224), Expect = 1e-20
 Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 18/171 (10%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY----GVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
           +++L W        E   Y+V Y    G + H +             +T+L  G EY   
Sbjct: 120 SLDLEWDNSE---AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVG 176

Query: 65  IAGQNHIGYGQ-ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
           I+   +       T+   T         P ++     +   + + W        +G I  
Sbjct: 177 ISAVMNSKQSIPATMNARTEL-----DSPRDLMVTASSETSISLIWTKA-----SGPIDH 226

Query: 124 YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
           Y + F      ++ +     +T    ++LE G EY   + A         S
Sbjct: 227 YRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLES 277

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 55.2 bits (133), Expect = 8e-09
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           +I L+W++ +   G I  YR+ +        E  V     S+ +T+LE G EY   I  +
Sbjct: 212 SISLIWTKAS---GPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAE 268

Query: 69  NHIGYGQETVRYYTT 83
                  E+     T
Sbjct: 269 RGRQQSLESTVDAFT 283

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score =  126 bits (318), Expect = 2e-34
 Identities = 35/176 (19%), Positives = 56/176 (31%), Gaps = 8/176 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
             E+ W Q       IL Y +++                    S  +  +     Y FR+
Sbjct: 20  KAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRV 79

Query: 66  AGQNHIGYGQ--ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
              N IG           TT    P   P N+      P+ + I+W P      N     
Sbjct: 80  IAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFH 139

Query: 124 YNVKFHKKIDAN---NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPK 176
           Y V + + I A    N    +  Q   V ++    ++Y  +V AI   G    + +
Sbjct: 140 YYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAE 195

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 84.4 bits (209), Expect = 4e-19
 Identities = 35/234 (14%), Positives = 61/234 (26%), Gaps = 43/234 (18%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN---VIHRNT 142
             P              D   I W+          I+ Y ++F+      +      +  
Sbjct: 7   NAPKLTGITC-----QADKAEIHWEQQ--GDNRSPILHYTIQFNTSFTPASWDAAYEKVP 59

Query: 143 TQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMV--RAPLGVKALATSDQ 200
               +    +     Y+  V A  K G  P S      T +  V  + P  V    T   
Sbjct: 60  NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPN 119

Query: 201 SVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVE 258
           ++ + W P+P          Y + +          W   +I     +NI           
Sbjct: 120 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPA--AAWENNNIFDWRQNNI----------- 166

Query: 259 DLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED 312
                            +     F +Y + V A    G   ++ +  V    ED
Sbjct: 167 ----------------VIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGED 204

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 34/151 (22%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
           AP        +D   E+ W+     R  IL Y I +  T+      W             
Sbjct: 8   APKLTGITCQAD-KAEIHWEQQGDNRSPILHYTIQF-NTSFTP-ASWDA----------- 53

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                           + + VP T+S+ +  +  +  Y   V A    G    S      
Sbjct: 54  ----------------AYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSC 97

Query: 308 VKPEDVPLS----LRAHDVSTHSMTLSWSPP 334
               DVP      +       +++ +SW+P 
Sbjct: 98  TTQPDVPFKNPDNVVGQGTEPNNLVISWTPM 128

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score =  128 bits (324), Expect = 2e-34
 Identities = 57/302 (18%), Positives = 93/302 (30%), Gaps = 53/302 (17%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           ++   W+ P     ++ GYRV+     +   +KE  +   + S +++ L    +YE  + 
Sbjct: 36  SLSAQWTPPN---VQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVY 92

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
                   +      TT E     PP        T   + I+W           I  + V
Sbjct: 93  ALKDTLTSRPAQGVVTTLENV--SPPRRARVTDATETTITISWRTK-----TETITGFQV 145

Query: 127 KFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
                 +    I R           + L+ G +Y   +  +                A  
Sbjct: 146 DAVPA-NGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVI----DAST 200

Query: 185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTES 244
            + AP  ++ LAT+  S+ V W+P    R +I GY I Y                     
Sbjct: 201 AIDAPSNLRFLATTPNSLLVSWQPP---RARITGYIIKYE---KPGSPPR---------- 244

Query: 245 SNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR-LSGK 303
                            E   +  P    A +T LE  TEY + V A   N     L G+
Sbjct: 245 -----------------EVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIGR 287

Query: 304 VT 305
             
Sbjct: 288 KK 289

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score =  117 bits (294), Expect = 4e-30
 Identities = 47/265 (17%), Positives = 86/265 (32%), Gaps = 47/265 (17%)

Query: 73  YGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI 132
           +   +       +GP    P ++     TP  +   W PP     N Q+  Y V+   K 
Sbjct: 5   HHHHSSGLEVLFQGPAIPAPTDLKFTQVTPTSLSAQWTPP-----NVQLTGYRVRVTPKE 59

Query: 133 DANN--VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPL 190
                  I+     +  V S L    +Y   V A+        +    ++T  + V  P 
Sbjct: 60  KTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQ--GVVTTLENVSPPR 117

Query: 191 GVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI 250
             +    ++ ++ + W+        I G+Q+        +     Q++I           
Sbjct: 118 RARVTDATETTITISWRTKT---ETITGFQVDAVPA---NGQTPIQRTIK---------- 161

Query: 251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK- 309
                             P   S  +T L+  T+Y + +     N     S  V +    
Sbjct: 162 ------------------PDVRSYTITGLQPGTDYKIYLYTLNDNA---RSSPVVIDAST 200

Query: 310 PEDVPLSLRAHDVSTHSMTLSWSPP 334
             D P +LR    + +S+ +SW PP
Sbjct: 201 AIDAPSNLRFLATTPNSLLVSWQPP 225

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 77.9 bits (192), Expect = 3e-16
 Identities = 28/182 (15%), Positives = 55/182 (30%), Gaps = 48/182 (26%)

Query: 153 EEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAG 212
                +S+ ++ + +    P               AP  +K    +  S+   W P    
Sbjct: 3   HHHHHHSSGLEVLFQGPAIP---------------APTDLKFTQVTPTSLSAQWTPPN-- 45

Query: 213 RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTE 272
             ++ GY++  T    E      + ++    SS                           
Sbjct: 46  -VQLTGYRVRVTPK--EKTGPMKEINLAPDSSS--------------------------- 75

Query: 273 SAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWS 332
              ++ L   T+Y V+V A       R +  V   ++    P   R  D +  ++T+SW 
Sbjct: 76  -VVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITISWR 134

Query: 333 PP 334
             
Sbjct: 135 TK 136

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 5/77 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKE--NLVNSKNMSFLITNLERGVEYEFRIA 66
           ++ + W  P      I GY +KY       +E             IT LE G EY   + 
Sbjct: 217 SLLVSWQPPR---ARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVI 273

Query: 67  GQNHIGYGQETVRYYTT 83
              +    +  +    T
Sbjct: 274 ALKNNQKSEPLIGRKKT 290

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score =  131 bits (331), Expect = 3e-33
 Identities = 44/385 (11%), Positives = 105/385 (27%), Gaps = 79/385 (20%)

Query: 10  IELVWSQPTQT-YGEILGYRVKY-------------------------GVREHTLKENLV 43
           I L W       + ++LG+ + Y                          +       +  
Sbjct: 485 ILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPK 544

Query: 44  NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET------VRYYTTPEGPPTGPPANISH 97
           +  +  +L+  L+   +Y   +         + T      + Y  T    P   P +   
Sbjct: 545 SQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNP-SVPLDPIS 603

Query: 98  HFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIE 157
              +   + + W PP  +  NG I  Y V + ++ + + +   +         +      
Sbjct: 604 VSNSSSQIILKWKPP--SDPNGNITHYLVFWERQAEDSELFELDYCLKGLKLPSRT---- 657

Query: 158 YSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKIL 217
           +S   ++           + S        +    +      + S    ++          
Sbjct: 658 WSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILK-ELEESSFRKTFED--------- 707

Query: 218 GYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTE-SAEL 276
                           +    + +   S   R    +    + +E       + + S  +
Sbjct: 708 ----------------YLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVI 751

Query: 277 TSLEKFTEYAVAVAARTVNGLGRLSGK---VTVKVKPE----DVPLSLRAHDVSTHSMTL 329
           + L  FT Y + + A   +           V+ +  PE    D+   +       + + L
Sbjct: 752 SGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHL 811

Query: 330 SWSPPIKLN------PVKYKEVSEK 348
            W  P + N       V Y+   ++
Sbjct: 812 MWQEPKEPNGLIVLYEVSYRRYGDE 836

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score =  130 bits (326), Expect = 1e-32
 Identities = 50/321 (15%), Positives = 89/321 (27%), Gaps = 46/321 (14%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
            I L W  P+   G I  Y V +        E+    +    L         +      +
Sbjct: 610 QIILKWKPPSDPNGNITHYLVFW----ERQAEDSELFELDYCLKGLKLPSRTWSPPFESE 665

Query: 69  NHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPL------RTHRNGQIV 122
           +   + Q                 + I    +       T++  L            +  
Sbjct: 666 DSQKHNQSEYEDSAGECCSCPKTDSQILKELE-ESSFRKTFEDYLHNVVFVPRPSRKRRS 724

Query: 123 LYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
           L +V      + +    +   +   V S L     Y  E+QA  +  P       + ++A
Sbjct: 725 LGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSA 784

Query: 183 RDMVRA-----PLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQK 237
           R M  A        V      +  V + W+      G I+ Y++ Y     E+L      
Sbjct: 785 RTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCD-- 842

Query: 238 SIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL 297
                                     ++K   L     L  L     Y+V + A ++ G 
Sbjct: 843 --------------------------TRKHFALERGCRLRGLSP-GNYSVRIRATSLAGN 875

Query: 298 GRLSGKVTVKVKP-EDVPLSL 317
           G  +      V    DVP ++
Sbjct: 876 GSWTEPTYFYVTDYLDVPSNI 896

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score =  110 bits (276), Expect = 3e-26
 Identities = 41/199 (20%), Positives = 61/199 (30%), Gaps = 22/199 (11%)

Query: 1   MLKEEPEVTIELVWSQPT---------QTYGEILGYRVKYGVREHTLKENLVNSKNMSFL 51
           +LKE  E +    +                   LG     G  E       V +K  S +
Sbjct: 692 ILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKE-SLV 750

Query: 52  ITNLERGVEYEFRIAGQNHIGYGQ-----ETVRYYTTPEGPPTGPPANISHHFQTPDVVC 106
           I+ L     Y   +   N     +       V   T PE         ++H     +VV 
Sbjct: 751 ISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVH 810

Query: 107 ITWDPPLRTHRNGQIVLYNVKFHKKIDAN----NVIHRNTTQTKAVFSNLEEGIEYSAEV 162
           + W  P     NG IVLY V + +  D      +       +       L  G  YS  +
Sbjct: 811 LMWQEP--KEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVRI 867

Query: 163 QAITKAGPGPWSPKLSLMT 181
           +A + AG G W+       
Sbjct: 868 RATSLAGNGSWTEPTYFYV 886

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score = 77.3 bits (189), Expect = 2e-15
 Identities = 35/333 (10%), Positives = 91/333 (27%), Gaps = 40/333 (12%)

Query: 59  VEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRN 118
           +     ++G        +        +          S+   + D + + W+P       
Sbjct: 439 IHKMEEVSGTKGRQERNDIALKTNGDQASCENELLKFSYIRTSFDKILLRWEPY-WPPDF 497

Query: 119 GQIVLYNVKFHKKIDAN-------------------------NVIHRNTTQTKAVFSNLE 153
             ++ + + + +    N                         +   ++      +   L+
Sbjct: 498 RDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLK 557

Query: 154 EGIEYSAEVQAITKAG-----PGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKP 208
              +Y+  V+ +          G  S  + + T       PL   +++ S   + + WKP
Sbjct: 558 PWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKP 617

Query: 209 VPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSV 268
                G I  Y +F+      +  E  +    L      +R +      ED  + +Q   
Sbjct: 618 PSDPNGNITHYLVFWERQ--AEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEY 675

Query: 269 PLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMT 328
             +     +  +  ++    +   +         K         V +   +    +    
Sbjct: 676 EDSAGECCSCPKTDSQILKELEESSF-------RKTFEDYLHNVVFVPRPSRKRRSLGDV 728

Query: 329 LSWSPPIKLNPVKYKEVSEKIQERRLQKYGQYR 361
            +     +  P +     E +    L+ +  YR
Sbjct: 729 GNAGNNEEHRPFEKVVNKESLVISGLRHFTGYR 761

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score =  123 bits (310), Expect = 9e-31
 Identities = 58/381 (15%), Positives = 108/381 (28%), Gaps = 60/381 (15%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLK--------ENLVNSKNMSFLITNLERGVE 60
            +E+ WS       E + Y V+                 + +  + +    +T++     
Sbjct: 176 QLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRW 235

Query: 61  YEFRIAGQNHIGYGQ--ETVRYYTTPEGPPTGPP------ANISHHFQTPDVVCITWDPP 112
           Y+FR+A  N  G        +++ + + P   P       AN + +      V I WD P
Sbjct: 236 YQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLP 295

Query: 113 LRTHRNGQIVLYNVKFHKKIDANNVI-----HRNTT---QTKAVFSNLEEGIEYSAEVQA 164
                +  +  Y V +   + + +++      R TT   Q   +   L+   +Y  E+QA
Sbjct: 296 --EEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQA 353

Query: 165 ITKAGPGPWSP---KLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQI 221
           IT  G          L   +          VK      Q+   + +  P    ++     
Sbjct: 354 ITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFY 413

Query: 222 FYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEK 281
                 V+    W +   P     ++                +   +       L  L  
Sbjct: 414 QDGQLQVKVY--WKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSF 471

Query: 282 FTEYAVAVAARTVNGLGRLSGKV----------------------------TVKVKPEDV 313
             +Y V V         +                                  V  KPE++
Sbjct: 472 SCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENL 531

Query: 314 PLSLRAHDVSTHSMTLSWSPP 334
             S    DV+  +   SW   
Sbjct: 532 SASFIVQDVNI-TGHFSWKMA 551

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score =  121 bits (304), Expect = 5e-30
 Identities = 52/397 (13%), Positives = 97/397 (24%), Gaps = 89/397 (22%)

Query: 7   EVTIELVWSQPTQTYGEILGYRVKYGVR--------EHTLKENLVNSKNMSFLITNLERG 58
            VT+ +VW  P +    +  Y+V +               +    +    S ++  L+  
Sbjct: 285 SVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPD 344

Query: 59  VEYEFRIAGQNHIGYGQ---ETVRYYTTPEGPPTGPPANISHHFQTPDV----------- 104
            +Y   +    + G  +     V  + T           +                    
Sbjct: 345 CDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTR 404

Query: 105 ---------------VCITWDPPLRTHRNGQIVLY--NVKFHKKIDANNVIHRNTTQTKA 147
                          V + W        N   V +      H +   +      T +   
Sbjct: 405 PLEVGAPFYQDGQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYI 464

Query: 148 VFSNLEEGIEYSAEVQAITKAGPGPWSPKL----------------------SLMTARDM 185
           +  +L    +Y   VQ I                                  +      +
Sbjct: 465 ILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKV 524

Query: 186 VRAPLGVKAL---ATSDQSVEVWWKPVPA-GRGKILGYQIFYTMTAVEDLDEWSQKSIPL 241
           +  P  + A       + +    WK   A     + G+Q+ +     E   E  Q S+P 
Sbjct: 525 LAKPENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVTWA----EVTTESRQNSLPN 580

Query: 242 TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
           +  S                  SQ          + +L   T Y + V   T  G G  +
Sbjct: 581 SIISQ-----------------SQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPAT 623

Query: 302 GKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLN 338
              T +  PE  P S     +        + P  +  
Sbjct: 624 -IKTFRT-PELPPSSAHRSHLKHRHPH-HYKPSPERY 657

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 97.0 bits (240), Expect = 9e-22
 Identities = 39/291 (13%), Positives = 79/291 (27%), Gaps = 48/291 (16%)

Query: 72  GYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV----- 126
           G G       T  +G P  P   +         + + W      + + + V+Y V     
Sbjct: 144 GCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSK--FNISIEPVIYVVQRRWN 201

Query: 127 ---KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
                 +    +      TT  +   +++     Y   V A+   G   ++       + 
Sbjct: 202 YGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSS 261

Query: 184 DMVRAP--------LGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWS 235
               AP              +    +V + W         +  Y++F++          +
Sbjct: 262 KDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPT 321

Query: 236 QKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTV 294
           +K                           +K+    + S  L  L+   +Y V + A T 
Sbjct: 322 KK-------------------------KRRKTTDGFQNSVILEKLQPDCDYVVELQAITY 356

Query: 295 NGLGRLSG-KVTVKVKPEDVPLS---LRAHDVSTHSMTLSWSPPIKLNPVK 341
            G  RL   KV++         +   L           L +       P++
Sbjct: 357 WGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLE 407

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 66.1 bits (160), Expect = 8e-12
 Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 17/116 (14%)

Query: 4   EEPEVTIELVWSQPTQT-YGEILGYRVKYGVREHTLKEN-----------LVNSKNMSFL 51
           ++  +T    W       Y  + G++V +       ++N           ++ S +    
Sbjct: 538 QDVNITGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLT 597

Query: 52  ITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPA-----NISHHFQTP 102
           + NL     Y   +      G G  T++ + TPE PP+            HH++  
Sbjct: 598 VPNLRPSTLYRLEVQVLTPGGEGPATIKTFRTPELPPSSAHRSHLKHRHPHHYKPS 653

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 63.1 bits (152), Expect = 8e-11
 Identities = 23/184 (12%), Positives = 46/184 (25%), Gaps = 36/184 (19%)

Query: 162 VQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQI 221
           V+     G G        +     ++    ++        +EV W        + + Y +
Sbjct: 137 VKKCCSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVV 196

Query: 222 FYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEK 281
                      E                         D   W   +    E  +LT +  
Sbjct: 197 QRRWNYGIHPSED------------------------DATHWQTVAQTTDERVQLTDIRP 232

Query: 282 FTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP-----------LSLRAHDVSTHSMTLS 330
              Y   VAA  V+G    +   +   +    P            +   +   + ++T+ 
Sbjct: 233 SRWYQFRVAAVNVHGTRGFT-APSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIV 291

Query: 331 WSPP 334
           W  P
Sbjct: 292 WDLP 295

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score =  116 bits (292), Expect = 1e-30
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 34/226 (15%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPL--RTHRNGQIVLYNVKFHKKIDAN-NVIHRNTTQ 144
           P  PP  +     + D + ITW      +  +      Y V++   I AN    + N T 
Sbjct: 4   PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 63

Query: 145 TKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD---MVRAPLGVKALATSDQS 201
              + + L+    Y   V          WS      T           + V +     ++
Sbjct: 64  LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKT 123

Query: 202 VEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD 261
           + V W+P     GKI GY I+Y+     ++ +W  + +                      
Sbjct: 124 IIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVV--------------------- 162

Query: 262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                      + ++  L   T Y   + AR   G+G +S  V  +
Sbjct: 163 -------GNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFR 201

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score =  113 bits (284), Expect = 1e-29
 Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 14/185 (7%)

Query: 9   TIELVWSQPT----QTYGEILGYRVKYGVR-EHTLKENLVNSKNMSFLITNLERGVEYEF 63
           TI + W+  +    Q   +   Y V++        K    N+  +S+L+T L+    YEF
Sbjct: 20  TIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEF 79

Query: 64  RIAGQNHIGYGQET-VRYYTTPEGPPTGPPANISHHFQ--TPDVVCITWDPPLRTHRNGQ 120
            +           +   + TT E  PT PP +++   +   P  + + W PP  +  NG+
Sbjct: 80  SVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPP--SEANGK 137

Query: 121 IVLYNVKFHKKIDAN----NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPK 176
           I  Y + +   ++A      +      +       L     Y  ++QA    G GP S  
Sbjct: 138 ITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEA 197

Query: 177 LSLMT 181
           +   T
Sbjct: 198 VQFRT 202

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score = 75.2 bits (185), Expect = 6e-16
 Identities = 24/161 (14%), Positives = 45/161 (27%), Gaps = 42/161 (26%)

Query: 188 APLGVKALATSDQSVEVWWKPVPA----GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTE 243
            P+GV+A   S  ++ + W                Y + +             K+   T 
Sbjct: 7   PPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWK---TNIPANTKYKNANAT- 62

Query: 244 SSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK 303
                                      T S  +T L+  T Y  +V           S  
Sbjct: 63  ---------------------------TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMT 95

Query: 304 VTVKVKPEDVP------LSLRAHDVSTHSMTLSWSPPIKLN 338
                  E VP      +++ + +    ++ ++W PP + N
Sbjct: 96  AHGTT-FELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEAN 135

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score =  112 bits (282), Expect = 2e-29
 Identities = 44/181 (24%), Positives = 68/181 (37%), Gaps = 9/181 (4%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
           ++ L W  P    G +I  Y V+     R+        N    S+ +  L+ G  Y FR+
Sbjct: 21  SVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA-TNCHKTSWKVDQLQEGCSYYFRV 79

Query: 66  AGQNHIGYGQ--ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
             +N  G G   ET          P  PP  I+    T + V ++W+ P       +I+ 
Sbjct: 80  LAENEYGIGLPAETAE-SVKASERP-LPPGKITLMDVTRNSVSLSWEKPEHDG-GSRILG 136

Query: 124 YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
           Y V+   K             T+A  + L +G EYS  V A  + G          + A+
Sbjct: 137 YIVEMQTKGSDKWATCATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVIAK 196

Query: 184 D 184
           D
Sbjct: 197 D 197

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score = 89.3 bits (222), Expect = 6e-21
 Identities = 49/228 (21%), Positives = 80/228 (35%), Gaps = 42/228 (18%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL-YNVKFHKKIDANNVIHR---NTTQT 145
           GPP ++     T   V +TWDPP      G  +  Y V   K+            N  +T
Sbjct: 7   GPPQDLKVKEVTKTSVTLTWDPP--LLDGGSKIKNYIV--EKRESTRKAYSTVATNCHKT 62

Query: 146 KAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEV- 204
                 L+EG  Y   V A  + G G  +     + A +    P  +  +  +  SV + 
Sbjct: 63  SWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLS 122

Query: 205 WWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS 264
           W KP   G  +ILGY +                                    +  D+W+
Sbjct: 123 WEKPEHDGGSRILGYIVEMQT--------------------------------KGSDKWA 150

Query: 265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED 312
             +      A +T L +  EY+  V+A+   G+     +++V V  +D
Sbjct: 151 TCATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPR-QLSVPVIAKD 197

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 29/152 (19%), Positives = 49/152 (32%), Gaps = 38/152 (25%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRG--KILGYQIFYTMTAVEDLDEWSQKSIPLTESS 245
            P  +K    +  SV + W P P   G  KI  Y +           E  + +       
Sbjct: 8   PPQDLKVKEVTKTSVTLTWDP-PLLDGGSKIKNYIV-----------EKREST------- 48

Query: 246 NIARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGRLSGKV 304
                            +S  +    + S ++  L++   Y   V A    G+G  +   
Sbjct: 49  --------------RKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAENEYGIGLPAETA 94

Query: 305 TVKVKPE--DVPLSLRAHDVSTHSMTLSWSPP 334
                 E    P  +   DV+ +S++LSW  P
Sbjct: 95  ESVKASERPLPPGKITLMDVTRNSVSLSWEKP 126

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score =  113 bits (284), Expect = 1e-27
 Identities = 49/312 (15%), Positives = 84/312 (26%), Gaps = 47/312 (15%)

Query: 14  WSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGV-EYEFRIAGQNHIG 72
           W  P        GY       +           + S  +   E  +   E   + +   G
Sbjct: 258 WLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEG 317

Query: 73  YGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK- 131
           + +      + P   P   P  ++        V + W PP  +    + ++Y+V   +  
Sbjct: 318 FFRAPQDPASMPCTRPPSAPHYLTAVG-MGAKVELRWTPPQDSG-GREDIVYSVTCEQCW 375

Query: 132 -----------IDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLM 180
                          +      T+T    S+LE  + Y+  V+A         S      
Sbjct: 376 PESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTA 435

Query: 181 TARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIP 240
           +       P  V+    S  S+ V W   P  + ++  Y++ Y     +  D  S     
Sbjct: 436 SVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYR----KKGDSNSYNVRR 491

Query: 241 LTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRL 300
                                           S  L  L   T Y V V A T  G G  
Sbjct: 492 TEGF----------------------------SVTLDDLAPDTTYLVQVQALTQEGQGAG 523

Query: 301 SGKVTVKVKPED 312
           S     +    +
Sbjct: 524 SKVHEFQTLSPE 535

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score = 67.9 bits (165), Expect = 2e-12
 Identities = 39/219 (17%), Positives = 59/219 (26%), Gaps = 35/219 (15%)

Query: 159 SAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWK-PVPAGRGKIL 217
                   + G        + M       AP  + A+      VE+ W  P  +G  + +
Sbjct: 307 EGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLTAVGMGA-KVELRWTPPQDSGGREDI 365

Query: 218 GYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTE-SAEL 276
            Y +       E                            E    +S+    LT  S  +
Sbjct: 366 VYSVTCEQCWPES---------------------GECGPCEASVRYSEPPHGLTRTSVTV 404

Query: 277 TSLEKFTEYAVAVAARTVNGLGRLSGKVTVK--VKPEDVPLSLRAHDVSTHSMTLSWSPP 334
           + LE    Y   V AR        S           +  P  +R    ST S+++SWS P
Sbjct: 405 SDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIP 464

Query: 335 IKLNPV--KYK-EVSEKIQERRLQKYGQYRYFETRDESY 370
                   KY+    +K           Y    T   S 
Sbjct: 465 PPQQSRVWKYEVTYRKKGDSN------SYNVRRTEGFSV 497

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score = 63.6 bits (154), Expect = 4e-11
 Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           ++ + WS P      +  Y V Y  +  +   N+  ++  S  + +L     Y  ++   
Sbjct: 456 SLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQAL 515

Query: 69  NHIGYGQ--ETVRYYT-TPEG 86
              G G   +   + T +PEG
Sbjct: 516 TQEGQGAGSKVHEFQTLSPEG 536

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score =  106 bits (266), Expect = 5e-27
 Identities = 30/197 (15%), Positives = 53/197 (26%), Gaps = 23/197 (11%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY--------------GVREHTLKENLVNSKNMSFLITN 54
           ++ L W  P      I+ ++V+Y               +     K N    K+ +  +T+
Sbjct: 17  SVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTD 76

Query: 55  LERGVEYEFRIAGQNHIGYGQ-----ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITW 109
           L+    Y FRI         +                 P   P  +     +   V + W
Sbjct: 77  LKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHW 136

Query: 110 DPPLRTHRNGQIVLYNVKFHKKIDANN---VIHRNTTQTKAVFSNLEEGIEYSAEVQAIT 166
                      I  Y   +     A                  + LE    Y  ++Q+ +
Sbjct: 137 SLASDAD-EHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFS 195

Query: 167 KAGPGPWSPKLSLMTAR 183
            A    +S      T R
Sbjct: 196 AASASEFSALKQGRTQR 212

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score = 77.2 bits (190), Expect = 1e-16
 Identities = 31/241 (12%), Positives = 64/241 (26%), Gaps = 51/241 (21%)

Query: 89  TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK--------------IDA 134
           T PP   +    + + V + W  P   +    IV++ V++                    
Sbjct: 2   TYPPTPPNVTRLSDESVMLRWMVP--RNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK 59

Query: 135 NNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP--KLSLMTARDMVR---AP 189
                       A  ++L+    Y   + A+        S       +     +     P
Sbjct: 60  PKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVP 119

Query: 190 LGVKALATSDQSVEVWWK-PVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA 248
             ++    S+ +V + W     A    I GY  +Y  +      E+ + +I         
Sbjct: 120 ELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPS--SSAGEYFKATIEGAH----- 172

Query: 249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV 308
                                   S ++  LE  T Y   + + +       S     + 
Sbjct: 173 ----------------------ARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRT 210

Query: 309 K 309
           +
Sbjct: 211 Q 211

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score = 61.0 bits (148), Expect = 5e-11
 Identities = 25/157 (15%), Positives = 46/157 (29%), Gaps = 25/157 (15%)

Query: 189 PLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA 248
           P        SD+SV + W         I+ +++ Y M        W   +          
Sbjct: 5   PTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVG--KRKNWQTTN---------- 52

Query: 249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG------ 302
                   +          +  + +A +T L+    Y   + A   N   + S       
Sbjct: 53  ------DNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFY 106

Query: 303 -KVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLN 338
            +    + P  VP  L   + S  ++ L WS     +
Sbjct: 107 LQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDAD 143

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score =  104 bits (261), Expect = 2e-26
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 12/184 (6%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKY-----GVREHTLKENLVNSKNMSFLITNLERGVEYE 62
           T ++ + +P  T G  IL Y+ ++      V      +    S      I  L+    Y 
Sbjct: 23  TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYA 82

Query: 63  FRIAGQNHIGYGQ--ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ 120
            R+A  N  G G+      + T P   P   P       +  + + +             
Sbjct: 83  VRLAALNGKGLGEISAASEFKTQPVREP-SAPKLEGQMGEDGNSIKVNLIKQ--DDGGSP 139

Query: 121 IVLYNVKFHKKIDANN-VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
           I  Y V++          I   +     +  +L+   EY   V A  + G    +  +  
Sbjct: 140 IRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFR 199

Query: 180 MTAR 183
             A 
Sbjct: 200 TAAA 203

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score = 84.1 bits (208), Expect = 5e-19
 Identities = 32/225 (14%), Positives = 55/225 (24%), Gaps = 40/225 (17%)

Query: 83  TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK-----IDANNV 137
                P+ P  +            + +D P        I+ Y  ++              
Sbjct: 4   AQADTPSSPSIDQVE--PYSSTAQVQFDEP-EATGGVPILKYKAEWRAVGEEVWHSKWYD 60

Query: 138 IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALA 196
               + +       L+    Y+  + A+   G G  S      T       AP     + 
Sbjct: 61  AKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMG 120

Query: 197 TSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTA 256
               S++V       G   I  Y + Y         EW                      
Sbjct: 121 EDGNSIKVNLIKQDDGGSPIRHYLVRYR----ALSSEWKP-------------------- 156

Query: 257 VEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
                    +    ++   L SL+   EY V V A    G  + +
Sbjct: 157 -------EIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAA 194

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score = 59.8 bits (145), Expect = 1e-10
 Identities = 27/150 (18%), Positives = 44/150 (29%), Gaps = 30/150 (20%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
           +P   +    S  +   + +P   G   IL Y+  +     E    W  K     E+S  
Sbjct: 11  SPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEV---WHSKWYDAKEASM- 66

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                       +  L+  T YAV +AA    GLG +S     K
Sbjct: 67  -----------------------EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 103

Query: 308 VKPEDV---PLSLRAHDVSTHSMTLSWSPP 334
            +P      P          +S+ ++    
Sbjct: 104 TQPVREPSAPKLEGQMGEDGNSIKVNLIKQ 133

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score = 56.0 bits (135), Expect = 3e-09
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 1/81 (1%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT-LKENLVNSKNMSFLITNLERGVEYEFRIAG 67
           +I++   +       I  Y V+Y         E  + S +   ++ +L+   EYE  +  
Sbjct: 125 SIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVA 184

Query: 68  QNHIGYGQETVRYYTTPEGPP 88
           +N  G  +     + T     
Sbjct: 185 ENQQGKSKAAHFVFRTAAAHH 205

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 98.9 bits (247), Expect = 2e-25
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
           ++    P+G P N+     T     + WDPP+   RNG+I+ Y V F + I++   +   
Sbjct: 2   SSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVF-RDINSQQELQNI 60

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
           TT T+   + L+    Y  +V+A T  G GP SP +   T
Sbjct: 61  TTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRT 100

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 65.8 bits (161), Expect = 1e-13
 Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 35/125 (28%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGR--GKILGYQIFYTMTAVEDLDEWSQKSIPLTESS 245
            P  +     +  + E+ W P       G+I+ Y + +                      
Sbjct: 11  FPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFR--------------------- 49

Query: 246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT 305
                       +   +   +++       LT L+  T Y + V A T  G G LS  + 
Sbjct: 50  ------------DINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQ 97

Query: 306 VKVKP 310
            +  P
Sbjct: 98  SRTMP 102

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 53.5 bits (129), Expect = 2e-09
 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 9   TIELVWSQPTQTY--GEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           T EL W  P      G I+ Y V +    ++ +E    + +  F +T L+    Y+ ++ 
Sbjct: 24  TTELAWDPPVLAERNGRIISYTVVF-RDINSQQELQNITTDTRFTLTGLKPDTTYDIKVR 82

Query: 67  GQNHIGYGQ--ETVRYYTTP 84
                G G    +++  T P
Sbjct: 83  AWTSKGSGPLSPSIQSRTMP 102

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 98.5 bits (246), Expect = 3e-25
 Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 1/121 (0%)

Query: 65  IAGQNHIGYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
            +  N  G G  T      T    P+ PP N+S        + ++W PP    +NG I  
Sbjct: 4   GSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITG 63

Query: 124 YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
           Y ++  K      +          +F+ LE+G +YS +V A+T  G GP S   +  T  
Sbjct: 64  YKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123

Query: 184 D 184
           +
Sbjct: 124 N 124

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 87.0 bits (216), Expect = 6e-21
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 36/154 (23%)

Query: 162 VQAITKAGPGPWSPKLSLMTARDM-VRAPLGVKALATSDQSVEVWWKPVPAG--RGKILG 218
             +  + GPG  +  ++++T  D+    P  V     + +S++V W P P+G   G I G
Sbjct: 4   GSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITG 63

Query: 219 YQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTS 278
           Y+I +  T        +++    T   N                              T 
Sbjct: 64  YKIRHRKT--------TRRGEMETLEPN------------------------NLWYLFTG 91

Query: 279 LEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED 312
           LEK ++Y+  V+A TVNG G  S   T +  PE+
Sbjct: 92  LEKGSQYSFQVSAMTVNGTGPPSNWYTAET-PEN 124

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)

Query: 9   TIELVWSQPTQTY--GEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           +I++ W  P      G I GY++++       +   +   N+ +L T LE+G +Y F+++
Sbjct: 44  SIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVS 103

Query: 67  GQNHIGYGQETVRYY-TTPE 85
                G G  +  Y   TPE
Sbjct: 104 AMTVNGTGPPSNWYTAETPE 123

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 25/100 (25%)

Query: 286 AVAVAARTVNGLGRLSGKVTVKVKPEDVP----LSLRAHDVSTHSMTLSWSPPIKLNP-- 339
             + ++    G G  +  +TV     DVP     ++    V++ S+ +SW PP       
Sbjct: 1   GSSGSSGNRYGPGVSTDDITVVT-LSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNG 59

Query: 340 ------VKYKEVSEKIQERR------------LQKYGQYR 361
                 +++++ + + +               L+K  QY 
Sbjct: 60  FITGYKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYS 99

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score = 95.1 bits (237), Expect = 8e-24
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 3/130 (2%)

Query: 72  GYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHK 130
           G    +      T    P+  P N+S   +    + I W PP    +NGQI  Y +++ K
Sbjct: 1   GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRK 60

Query: 131 KIDANNVIHR--NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRA 188
               ++V     + TQ   +   L+ G EY+  V A+T  G GP +  LS  T    +  
Sbjct: 61  ASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDE 120

Query: 189 PLGVKALATS 198
               +    S
Sbjct: 121 TRVPEVSGPS 130

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score = 86.6 bits (215), Expect = 1e-20
 Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 36/159 (22%)

Query: 169 GPGPWSPKLSLMTARDM-VRAPLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTM 225
           G    S  +++ T  D+   AP  +     + +S+ + W+P       G+I GY+I Y  
Sbjct: 1   GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRK 60

Query: 226 TAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTE 284
                                               + ++  V  T+ S  +  L++ TE
Sbjct: 61  A-------------------------------SRKSDVTETLVSGTQLSQLIEGLDRGTE 89

Query: 285 YAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVS 323
           Y   VAA T+NG G  +  ++ +   E      R  +VS
Sbjct: 90  YNFRVAALTINGTGPATDWLSAET-FESDLDETRVPEVS 127

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 132

 Score = 62.0 bits (151), Expect = 5e-12
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 9   TIELVWSQPTQTY--GEILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
           +I + W  P      G+I GY+++Y    R+  + E LV+   +S LI  L+RG EY FR
Sbjct: 34  SIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFR 93

Query: 65  IAGQNHIGYGQETVRYY-TTPEGPPTGPPA 93
           +A     G G  T      T E        
Sbjct: 94  VAALTINGTGPATDWLSAETFESDLDETRV 123

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score = 94.7 bits (236), Expect = 1e-23
 Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 6/133 (4%)

Query: 72  GYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHK 130
           G    +      T +  P+ PP  +         V ++W PP    RNG I  Y+V +  
Sbjct: 1   GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEA 60

Query: 131 KIDANNVIHR----NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDM- 185
               +   H     +   +      LE+  EY   V+A T  GPGP S  + + T  D+ 
Sbjct: 61  VDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVP 120

Query: 186 VRAPLGVKALATS 198
              P  V++  +S
Sbjct: 121 SGPPRKVESGPSS 133

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score = 89.0 bits (221), Expect = 1e-21
 Identities = 40/149 (26%), Positives = 49/149 (32%), Gaps = 32/149 (21%)

Query: 169 GPGPWSPKLSLMTARDM-VRAPLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTM 225
           G    S  +   TA+      P  V  ++    +V V W P PA    G I  Y + Y  
Sbjct: 1   GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEA 60

Query: 226 TAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEY 285
              ED        I                                 S +L  LEK+TEY
Sbjct: 61  VDGEDRGRHVVDGISRE----------------------------HSSWDLVGLEKWTEY 92

Query: 286 AVAVAARTVNGLGRLSGKVTVKVKPEDVP 314
            V V A T  G G  S  V V+   EDVP
Sbjct: 93  RVWVRAHTDVGPGPESSPVLVRT-DEDVP 120

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 134

 Score = 67.0 bits (164), Expect = 8e-14
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 9   TIELVWSQPTQTY--GEILGYRVKY----GVREHTLKENLVNSKNMSFLITNLERGVEYE 62
           T+ + W  P      G I  Y V Y    G        + ++ ++ S+ +  LE+  EY 
Sbjct: 34  TVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYR 93

Query: 63  FRIAGQNHIGYGQETVRYY-TTPEGPPTGPPANIS 96
             +     +G G E+      T E  P+GPP  + 
Sbjct: 94  VWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVE 128

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 95.2 bits (237), Expect = 3e-23
 Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 13/167 (7%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           T+ L W +P     +   YR+ Y        E  +   + SF++  L+ G EY   +  +
Sbjct: 22  TLSLRWRRPV---AKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAE 78

Query: 69  NHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKF 128
                 + T    +T  G P      IS    T +   ++W PP       ++  Y V +
Sbjct: 79  KGRHKSKPTTIKGSTVVGSPK----GISFSDITENSATVSWTPP-----RSRVDSYRVSY 129

Query: 129 HKKIDAN-NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
                   NV+  + ++T+     L  G++Y+  + ++         
Sbjct: 130 VPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPI 176

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 80.9 bits (200), Expect = 4e-18
 Identities = 28/218 (12%), Positives = 61/218 (27%), Gaps = 46/218 (21%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
             P ++     T   + + W  P       +   Y + +       N +      T  + 
Sbjct: 8   DNPKDLEVSDPTETTLSLRWRRP-----VAKFDRYRLTYVSPSGKKNEMEIPVDSTSFIL 62

Query: 150 SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPV 209
             L+ G EY+  + A             + +    +V +P G+     ++ S  V W P 
Sbjct: 63  RGLDAGTEYTISLVAEKGRHKSKP----TTIKGSTVVGSPKGISFSDITENSATVSWTPP 118

Query: 210 PAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVP 269
                ++  Y++ Y                                        +  +V 
Sbjct: 119 R---SRVDSYRVSYV--------------------------------PITGGTPNVVTVD 143

Query: 270 LTE-SAELTSLEKFTEYAVAVAARTVNGLGR-LSGKVT 305
            ++   +L  L    +Y V + +         +SG + 
Sbjct: 144 GSKTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILK 181

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 65.9 bits (161), Expect = 7e-13
 Identities = 27/156 (17%), Positives = 56/156 (35%), Gaps = 39/156 (25%)

Query: 180 MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
           + A   +  P  ++    ++ ++ + W+       K   Y++ Y         + ++  I
Sbjct: 1   INAGTDLDNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYV----SPSGKKNEMEI 53

Query: 240 PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR 299
           P+  +                            S  L  L+  TEY +++ A    G  +
Sbjct: 54  PVDST----------------------------SFILRGLDAGTEYTISLVA--EKGRHK 83

Query: 300 LSGKVTVKVK-PEDVPLSLRAHDVSTHSMTLSWSPP 334
            S   T+K       P  +   D++ +S T+SW+PP
Sbjct: 84  -SKPTTIKGSTVVGSPKGISFSDITENSATVSWTPP 118

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 4/76 (5%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYG-VREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
           +  + W+ P      +  YRV Y  +   T     V+       +  L  GV+Y   I  
Sbjct: 110 SATVSWTPPR---SRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIIS 166

Query: 68  QNHIGYGQETVRYYTT 83
                  +       T
Sbjct: 167 VKGFEESEPISGILKT 182

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 94.5 bits (235), Expect = 8e-23
 Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 14/170 (8%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT--LKENLVNSKNMSFLITNLERGVEYEFRIA 66
           +I L W+        I+GYR+          + E+ V+S    + +T LE G++Y+  + 
Sbjct: 38  SIGLRWTPLNS--STIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVY 95

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
              + G    T     T   PPT    ++      PD + +TW PP     +  +  + V
Sbjct: 96  TVKNGGESTPTTLTQQTAVPPPT----DLRFTNIGPDTMRVTWAPP----PSIDLTNFLV 147

Query: 127 KFHKKIDANNV--IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
           ++    +  +V  +  + +    V +NL  G EY   V ++ +       
Sbjct: 148 RYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL 197

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 92.2 bits (229), Expect = 6e-22
 Identities = 38/243 (15%), Positives = 83/243 (34%), Gaps = 46/243 (18%)

Query: 67  GQNHIGYGQ-ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYN 125
           G +H  +     +    +    P   P ++S    T   + + W P      +  I+ Y 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMEVP--QPTDLSFVDITDSSIGLRWTPL----NSSTIIGYR 55

Query: 126 VKFHKKIDAN--NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
           +      +         +++      + LE GI+Y   V  +   G    +     +T +
Sbjct: 56  ITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTT----LTQQ 111

Query: 184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTE 243
             V  P  ++       ++ V W P P+    +  + + Y  + V++ ++ ++ SI  ++
Sbjct: 112 TAVPPPTDLRFTNIGPDTMRVTWAPPPS--IDLTNFLVRY--SPVKNEEDVAELSISPSD 167

Query: 244 SSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR-LSG 302
           +                            +  LT+L   TEY V+V++         L G
Sbjct: 168 N----------------------------AVVLTNLLPGTEYVVSVSSVYEQHESTPLRG 199

Query: 303 KVT 305
           +  
Sbjct: 200 RQK 202

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 66.8 bits (163), Expect = 5e-13
 Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 34/161 (21%)

Query: 174 SPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDE 233
           S  L    +   V  P  +  +  +D S+ + W P+ +    I+GY+I     A  +   
Sbjct: 11  SSGLVPRGSHMEVPQPTDLSFVDITDSSIGLRWTPLNSST--IIGYRITVV--AAGEGIP 66

Query: 234 WSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAART 293
             +  +  +                                 +T LE   +Y ++V    
Sbjct: 67  IFEDFVDSSVGY----------------------------YTVTGLEPGIDYDISVYTVK 98

Query: 294 VNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPP 334
             G    +  +T +      P  LR  ++   +M ++W+PP
Sbjct: 99  NGGESTPT-TLTQQTAV-PPPTDLRFTNIGPDTMRVTWAPP 137

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 4/77 (5%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVR--EHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           T+ + W+ P     ++  + V+Y     E  + E  ++  + + ++TNL  G EY   ++
Sbjct: 129 TMRVTWAPPPS--IDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVS 186

Query: 67  GQNHIGYGQETVRYYTT 83
                           T
Sbjct: 187 SVYEQHESTPLRGRQKT 203

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 91.7 bits (228), Expect = 1e-22
 Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 30/147 (20%)

Query: 169 GPGPWSPKLSLMTARDM-VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTA 227
           G    S  +   T+      AP  V+A   S  ++ V WK      G+I GY        
Sbjct: 1   GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGY-------- 52

Query: 228 VEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAV 287
                                R++YTM   + ++ W + +V  ++   + +L     Y+V
Sbjct: 53  ---------------------RVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSV 91

Query: 288 AVAARTVNGLGRLSGKVTVKVKPEDVP 314
            V A T  G G LS  + V  +    P
Sbjct: 92  KVLAFTSIGDGPLSSDIQVITQTGSGP 118

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 82.1 bits (203), Expect = 3e-19
 Identities = 27/117 (23%), Positives = 40/117 (34%), Gaps = 6/117 (5%)

Query: 72  GYGQE-TVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHK 130
           G           T E  P+  P ++     +   + + W  P     NGQI  Y V +  
Sbjct: 1   GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPE--EPNGQIQGYRVYYTM 58

Query: 131 ---KIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
              +   N + H           NL     YS +V A T  G GP S  + ++T   
Sbjct: 59  DPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 60.5 bits (147), Expect = 1e-11
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 6/89 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
           TI + W +P +  G+I GYRV Y     +          + +    I NL     Y  ++
Sbjct: 34  TILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKV 93

Query: 66  AGQNHIGYGQE-TVRYYTTPEGPPTGPPA 93
                IG G   +     T  G    P +
Sbjct: 94  LAFTSIGDGPLSSDIQVITQTGSG--PSS 120

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 89.5 bits (222), Expect = 7e-22
 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 82  TTPEGPPTGPPANIS-HHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK---IDANNV 137
           +T EG P+  P N++    ++ D V I W  P    ++G++V Y +    +   I    +
Sbjct: 12  STTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELL 71

Query: 138 IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
                  ++A  S        +  + A+T+ G GP+S  + +  
Sbjct: 72  EEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFI 115

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 76.0 bits (187), Expect = 4e-17
 Identities = 28/152 (18%), Positives = 44/152 (28%), Gaps = 33/152 (21%)

Query: 169 GPGPWSPKLSLMTARDM-VRAPLGVKALAT-SDQSVEVWWKPVPAG--RGKILGYQIFYT 224
           G    S  +   T       APL V      S  +V++ W   P     G+++GY+I + 
Sbjct: 1   GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHV 60

Query: 225 MTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTE 284
                       K +      N                           A ++       
Sbjct: 61  WQ-----SAGISKELLEEVGQN------------------------GSRARISVQVHNAT 91

Query: 285 YAVAVAARTVNGLGRLSGKVTVKVKPEDVPLS 316
             V +AA T  G+G  S  V + +     P S
Sbjct: 92  CTVRIAAVTRGGVGPFSDPVKIFIPAHSGPSS 123

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 9   TIELVWSQPTQTY--GEILGYRVKYGVREHTLKENL---VNSKNMSFLITNLERGVEYEF 63
            +++ W +P      GE++GYR+ +  +   + + L   V        I+          
Sbjct: 35  NVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSRARISVQVHNATCTV 94

Query: 64  RIAGQNHIGYGQ--ETVRYYTTPEGPPT 89
           RIA     G G   + V+ +      P+
Sbjct: 95  RIAAVTRGGVGPFSDPVKIFIPAHSGPS 122

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 88.5 bits (220), Expect = 1e-21
 Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 34/146 (23%)

Query: 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAV 228
           G    S  + ++T   +   PL  KA   S+ S+ + W P       I  Y++ Y     
Sbjct: 1   GSSGSSGDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPR--SDTIANYELVYK---- 54

Query: 229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVA 288
                                         +  E  + ++    S  L  L+  + Y   
Sbjct: 55  ----------------------------DGEHGEEQRITIEPGTSYRLQGLKPNSLYYFR 86

Query: 289 VAARTVNGLGRLSGKVTVKVKPEDVP 314
           +AAR+  GLG  + +++ +      P
Sbjct: 87  LAARSPQGLGASTAEISARTMQSSGP 112

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 70.4 bits (173), Expect = 3e-15
 Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 5/101 (4%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
            T  G P G P N     ++   + ++W PP    R+  I  Y + +             
Sbjct: 12  ITQTGVP-GQPLNFKAEPESETSILLSWTPP----RSDTIANYELVYKDGEHGEEQRITI 66

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
              T      L+    Y   + A +  G G  + ++S  T 
Sbjct: 67  EPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTM 107

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 65.1 bits (159), Expect = 3e-13
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           +I L W+ P      I  Y + Y   EH  ++ +      S+ +  L+    Y FR+A +
Sbjct: 33  SILLSWTPPRS--DTIANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAAR 90

Query: 69  NHIGYGQ--ETVRYYTTPEGPPT 89
           +  G G     +   T     P+
Sbjct: 91  SPQGLGASTAEISARTMQSSGPS 113

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 40.8 bits (96), Expect = 8e-05
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 296 GLGRLSGKVTVKVKPEDVP---LSLRAHDVSTHSMTLSWSPPIKLNPVKYK 343
           G    SG + V      VP   L+ +A   S  S+ LSW+PP       Y+
Sbjct: 1   GSSGSSGDIQVIT-QTGVPGQPLNFKAEPESETSILLSWTPPRSDTIANYE 50

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score = 87.0 bits (216), Expect = 5e-21
 Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 6/117 (5%)

Query: 74  GQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID 133
           G       +T E  P GPP +++    T   + +TW  P +  +NG I  Y + + +   
Sbjct: 1   GSSGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSP 60

Query: 134 ANN------VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
            +N       +            NL++  +Y   VQA  +AG GP S +++  T   
Sbjct: 61  GSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score = 78.6 bits (194), Expect = 6e-18
 Identities = 33/147 (22%), Positives = 48/147 (32%), Gaps = 31/147 (21%)

Query: 171 GPWSPKLSLMTARDM-VRAPLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTMTA 227
           G  S    + T        P+ V     + QS++V WK        G I GYQI Y   +
Sbjct: 1   GS-SGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENS 59

Query: 228 VEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAV 287
                ++S   +  T                            +E   L +L+KF +Y V
Sbjct: 60  PGSNGQYSIVEMKATGD--------------------------SEVYTLDNLKKFAQYGV 93

Query: 288 AVAARTVNGLGRLSGKVTVKVKPEDVP 314
            V A    G G  S ++      E  P
Sbjct: 94  VVQAFNRAGTGPSSSEINATT-LESGP 119

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122

 Score = 59.3 bits (144), Expect = 3e-11
 Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 9/90 (10%)

Query: 9   TIELVWSQPTQTY--GEILGYRVKY------GVREHTLKENLVNSKNMSFLITNLERGVE 60
           +I++ W  P +    G I GY++ Y         ++++ E      +  + + NL++  +
Sbjct: 31  SIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQ 90

Query: 61  YEFRIAGQNHIGYGQETVRYY-TTPEGPPT 89
           Y   +   N  G G  +     TT E  P+
Sbjct: 91  YGVVVQAFNRAGTGPSSSEINATTLESGPS 120

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 86.3 bits (214), Expect = 6e-21
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT-LKENLVNSKNMSFLITNLERGVEYEFRIAG 67
           T  L W  P +  GE+LGYR++Y   +            +  F +T L +G  Y FR+A 
Sbjct: 22  TALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAA 81

Query: 68  QNHIGYGQETVRYYTTPEGPPTGPPA 93
           +N  G G+E  +   TPE    GP +
Sbjct: 82  KNRAGLGEEFEKEIRTPEDLS-GPSS 106

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 6/111 (5%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK-IDANNVIHR 140
           ++    P  P   IS      +   + W PP      G+++ Y +++ +      N I  
Sbjct: 2   SSGSSGPGRPTMMIST--TAMNTALLQWHPPKEL--PGELLGYRLQYCRADEARPNTIDF 57

Query: 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLG 191
                    + L +G  Y   + A  +AG G    K  + T  D+     G
Sbjct: 58  GKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEK-EIRTPEDLSGPSSG 107

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 47.4 bits (113), Expect = 3e-07
 Identities = 23/123 (18%), Positives = 38/123 (30%), Gaps = 33/123 (26%)

Query: 192 VKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIF 251
           +    T+  +  + W P     G++LGY++ Y      D    +       +        
Sbjct: 13  MMISTTAMNTALLQWHPPKELPGELLGYRLQYC---RADEARPNTIDFGKDDQH------ 63

Query: 252 YTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPE 311
           +T                      +T L K T Y   +AA+   GLG           PE
Sbjct: 64  FT----------------------VTGLHKGTTYIFRLAAKNRAGLGEEF--EKEIRTPE 99

Query: 312 DVP 314
           D+ 
Sbjct: 100 DLS 102

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 85.6 bits (212), Expect = 1e-20
 Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIH 139
           ++    P    ++I     +P  + + W  P     +G ++ Y VK+H+K      +V  
Sbjct: 2   SSGSSGP-PAVSDIRVTRSSPSSLSLAWAVP--RAPSGAVLDYEVKYHEKGAEGPSSVRF 58

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
             T++ +A    L+ G  Y  +V+A ++AG GP+  +    T  D
Sbjct: 59  LKTSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLD 103

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 67.1 bits (164), Expect = 4e-14
 Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 30/129 (23%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
           A   ++   +S  S+ + W    A  G +L Y++ Y     E                  
Sbjct: 10  AVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKTSEN----- 64

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                     AEL  L++   Y V V AR+  G G    +   +
Sbjct: 65  -------------------------RAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQ 99

Query: 308 VKPEDVPLS 316
            + +  P S
Sbjct: 100 TQLDSGPSS 108

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 66.0 bits (161), Expect = 1e-13
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 4/86 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVR--EHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           ++ L W+ P    G +L Y VKY  +  E       + +      +  L+RG  Y  ++ 
Sbjct: 23  SLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKTSENRAELRGLKRGASYLVQVR 82

Query: 67  GQNHIGYGQ--ETVRYYTTPEGPPTG 90
            ++  GYG   +     T  +  P+ 
Sbjct: 83  ARSEAGYGPFGQEHHSQTQLDSGPSS 108

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 85.5 bits (212), Expect = 2e-20
 Identities = 29/147 (19%), Positives = 41/147 (27%), Gaps = 32/147 (21%)

Query: 169 GPGPWSPKLSLMTARDM-VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTA 227
           G    S    + +A+D    AP  V     S   + V W+ V      +  YQI Y    
Sbjct: 1   GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVL--EKIVESYQIRY---- 54

Query: 228 VEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAV 287
                 W+                              +      SA L +L   T+Y +
Sbjct: 55  ------WAAHDKEEAA-------------------NRVQVTSQEYSARLENLLPDTQYFI 89

Query: 288 AVAARTVNGLGRLSGKVTVKVKPEDVP 314
            V A    G G  S  +    K    P
Sbjct: 90  EVGACNSAGCGPPSDMIEAFTKKASGP 116

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 75.9 bits (187), Expect = 5e-17
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 7/103 (6%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKF---HKKIDANNVI 138
            + +  P+  P  +     +   + + W+          +  Y +++   H K +A N +
Sbjct: 12  NSAQDAPSEAPTEVGVKVLSSSEISVHWEHV----LEKIVESYQIRYWAAHDKEEAANRV 67

Query: 139 HRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
              + +  A   NL    +Y  EV A   AG GP S  +   T
Sbjct: 68  QVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFT 110

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 58.9 bits (143), Expect = 5e-11
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 8/89 (8%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
            I + W    +    +  Y+++Y     +E       V S+  S  + NL    +Y   +
Sbjct: 34  EISVHWEHVLE--KIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEV 91

Query: 66  AGQNHIGYGQETVRYY-TTPEGPPTGPPA 93
              N  G G  +      T +     P +
Sbjct: 92  GACNSAGCGPPSDMIEAFTKKASG--PSS 118

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 84.3 bits (209), Expect = 4e-20
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 4/102 (3%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK-IDANNVIHR 140
           ++ +  P      I         V + W  P     NG I+ Y +K+++K  +  +    
Sbjct: 5   SSGQAAP-SQVVVIRQERAGQTSVSLLWQEPE--QPNGIILEYEIKYYEKDKEMQSYSTL 61

Query: 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
               T+A  S L+ G  Y  +V+A T AG G +S  + + T 
Sbjct: 62  KAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 103

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 68.5 bits (168), Expect = 2e-14
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY-GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
           ++ L+W +P Q  G IL Y +KY    +     + + +      ++ L+ G  Y F++  
Sbjct: 26  SVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRA 85

Query: 68  QNHIGYGQ--ETVRYYTT-PEGPPTG 90
           +   G G+  + +   T  P GP +G
Sbjct: 86  RTSAGCGRFSQAMEVETGKPSGPSSG 111

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 62.4 bits (152), Expect = 2e-12
 Identities = 26/130 (20%), Positives = 40/130 (30%), Gaps = 33/130 (25%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
             + ++       SV + W+      G IL Y+I Y                        
Sbjct: 13  QVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEK--------------------- 51

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV 306
                      D +  S  ++      A ++ L+  T Y   V ART  G GR S  + V
Sbjct: 52  -----------DKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEV 100

Query: 307 KVKPEDVPLS 316
           +      P S
Sbjct: 101 ETGKPSGPSS 110

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 83.3 bits (206), Expect = 7e-20
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR- 140
           ++    P+  P  +     T   + ++W  P     NG I+ Y +++++K          
Sbjct: 2   SSGSSGPSTVP-IMHQVSATMRSITLSWPQP--EQPNGIILDYEIRYYEKEHNEFNSSMA 58

Query: 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
            +    A    L  G+ Y  +V+A T AG G +S K+   T  D
Sbjct: 59  RSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD 102

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 68.6 bits (168), Expect = 1e-14
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY-GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
           +I L W QP Q  G IL Y ++Y     +    ++  S+  +  I  L  G+ Y  ++  
Sbjct: 23  SITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRA 82

Query: 68  QNHIGYGQ--ETVRYYTTPEGPPT 89
           +   GYG+    + + T  +  P+
Sbjct: 83  RTVAGYGKFSGKMCFQTLTDSGPS 106

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 62.5 bits (152), Expect = 2e-12
 Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 33/128 (25%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
               +  ++ + +S+ + W       G IL Y+I Y                        
Sbjct: 10  TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEK--------------------- 48

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV 306
                      + +E++         +A +  L     Y V V ARTV G G+ SGK+  
Sbjct: 49  -----------EHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCF 97

Query: 307 KVKPEDVP 314
           +   +  P
Sbjct: 98  QTLTDSGP 105

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 83.5 bits (207), Expect = 7e-20
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 4/103 (3%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
           ++    P GP  N+     +P  + ITW+PP   + NG +  Y + F  ++      +  
Sbjct: 2   SSGSSGP-GPVENLQAVSTSPTSILITWEPPA--YANGPVQGYRL-FCTEVSTGKEQNIE 57

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
                     L++  EYS    A  + GPG  +  ++++T  D
Sbjct: 58  VDGLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 33/127 (25%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
               ++A++TS  S+ + W+P     G + GY++F T                       
Sbjct: 10  PVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCT----------------------- 46

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                         +     V    S +L  L+KFTEY++   A    G G  +  +TV 
Sbjct: 47  ---------EVSTGKEQNIEVDGL-SYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVV 96

Query: 308 VKPEDVP 314
              +  P
Sbjct: 97  TLSDSGP 103

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           +I + W  P    G + GYR+         ++N +    +S+ +  L++  EY  R    
Sbjct: 23  SILITWEPPAYANGPVQGYRLFCTEVSTGKEQN-IEVDGLSYKLEGLKKFTEYSLRFLAY 81

Query: 69  NHIGYGQ--ETVRYYTTPE-GPPTG 90
           N  G G   + +   T  + GP +G
Sbjct: 82  NRYGPGVSTDDITVVTLSDSGPSSG 106

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 83.2 bits (206), Expect = 1e-19
 Identities = 27/118 (22%), Positives = 39/118 (33%), Gaps = 8/118 (6%)

Query: 69  NHIGYGQ--ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
             IG G          T +  P GPP  I         V + W PP     NG I+ Y +
Sbjct: 7   GRIGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQPPA--APNGIILAYQI 63

Query: 127 KFHKKIDANN---VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
                    N   V     +  +   + L+    Y   + A T+ G G  +  L + T
Sbjct: 64  THRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 121

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 74.7 bits (184), Expect = 2e-16
 Identities = 30/156 (19%), Positives = 48/156 (30%), Gaps = 30/156 (19%)

Query: 162 VQAITKAGPG-PWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQ 220
             +  + G G P  P +   T  D+   P+G+        SV + W+P  A  G IL YQ
Sbjct: 3   SGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQ 62

Query: 221 IFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLE 280
           I + +                                       +   P       T L+
Sbjct: 63  ITHRL--NTTTANT---------------------------ATVEVLAPSARQYTATGLK 93

Query: 281 KFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLS 316
             + Y   + A+T  G G  +  + V  +    P S
Sbjct: 94  PESVYLFRITAQTRKGWGEAAEALVVTTEKRSGPSS 129

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 70.1 bits (172), Expect = 7e-15
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
           ++ L+W  P    G IL Y++ +       +T    ++      +  T L+    Y FRI
Sbjct: 43  SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRI 102

Query: 66  AGQNHIGYGQETVRYYTTPEGPPTGPPA 93
             Q   G+G+       T E   +GP +
Sbjct: 103 TAQTRKGWGEAAEALVVTTE-KRSGPSS 129

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 9/78 (11%)

Query: 288 AVAARTVNGLGRLSGKVTVKVKPEDVP---LSLRAHDVSTHSMTLSWSPPIKLN------ 338
           +  +    G G  S    ++   +DVP   + +   +V T S+ L W PP   N      
Sbjct: 2   SSGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAY 61

Query: 339 PVKYKEVSEKIQERRLQK 356
            + ++  +       ++ 
Sbjct: 62  QITHRLNTTTANTATVEV 79

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 87.6 bits (217), Expect = 4e-19
 Identities = 47/278 (16%), Positives = 79/278 (28%), Gaps = 42/278 (15%)

Query: 40  ENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHF 99
           +     + M   I          +     NH   G     Y       P   P  +    
Sbjct: 150 KTYSTGRKMILEIAPTSDNDFGRYNCTATNH--IGTRFQEYILALADVP-SSPYGVKIIE 206

Query: 100 QTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN---VIHRNTTQTKAVFSNLEEGI 156
            +     ++++ P  +H    I  Y V    K  A+    ++  +  QT  V +NLE   
Sbjct: 207 LSQTTAKVSFNKP-DSHGGVPIHHYQV--DVKEVASEIWKIVRSHGVQTMVVLNNLEPNT 263

Query: 157 EYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKI 216
            Y   V A+   G G +S      T      +P  +    +S +S ++       G   I
Sbjct: 264 TYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPI 323

Query: 217 LGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAEL 276
           L Y + Y     E  D+W +K +                                +   L
Sbjct: 324 LEYIVKYRSKDKE--DQWLEKKVQ----------------------------GNKDHIIL 353

Query: 277 TSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP 314
             L+    Y V + A    G    +     +      P
Sbjct: 354 EHLQWTMGYEVQITAANRLGYSEPT---VYEFSMPPKP 388

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 61.4 bits (149), Expect = 2e-10
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREH----TLKENLVNSKNMSFLITNLERGVEYEFR 64
           + +L  ++       IL Y VKY  R         E  V       ++ +L+  + YE +
Sbjct: 308 SFKLSITKQDDGGAPILEYIVKY--RSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQ 365

Query: 65  IAGQNHIGYGQETVRYYTTPEGP 87
           I   N +GY + TV  ++ P  P
Sbjct: 366 ITAANRLGYSEPTVYEFSMPPKP 388

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389

 Score = 57.5 bits (139), Expect = 3e-09
 Identities = 35/169 (20%), Positives = 51/169 (30%), Gaps = 42/169 (24%)

Query: 188 APLGVKALATSDQSVEV-WWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSN 246
           +P GVK +  S  + +V + KP   G   I  YQ+                     E ++
Sbjct: 198 SPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVK------------------EVAS 239

Query: 247 IARIFYTMTAVEDLDEWSQKSV-PLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT 305
                         + W       +     L +LE  T Y + VAA    G G  S    
Sbjct: 240 --------------EIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEI 285

Query: 306 VKVKPEDVP--LSLRAHDVSTHSMTLSWSPPIKLN------PVKYKEVS 346
            +  P   P   S+     S  S  LS +             VKY+   
Sbjct: 286 FQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKD 334

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 81.2 bits (201), Expect = 5e-19
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 4/103 (3%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
                 P GP  N+  +  +P  + +TW+ P+    NG+I  Y + + +K   +     +
Sbjct: 12  QPEVQLP-GPAPNLRAYAASPTSITVTWETPV--SGNGEIQNYKLYYMEK-GTDKEQDVD 67

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
            +      + L++  EYS  V A  K GPG  +P +++ T  D
Sbjct: 68  VSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 77.8 bits (192), Expect = 9e-18
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 33/146 (22%)

Query: 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAV 228
           G    S ++       +      ++A A S  S+ V W+   +G G+I  Y+++Y     
Sbjct: 1   GSSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYME--- 57

Query: 229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVA 288
                                        +  D+     V  + S  +  L+K+TEY+  
Sbjct: 58  -----------------------------KGTDKEQDVDVS-SHSYTINGLKKYTEYSFR 87

Query: 289 VAARTVNGLGRLSGKVTVKVKPEDVP 314
           V A   +G G  +  V V+   +  P
Sbjct: 88  VVAYNKHGPGVSTPDVAVRTLSDSGP 113

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           +I + W  P    GEI  Y++ Y  +    KE  V+  + S+ I  L++  EY FR+   
Sbjct: 33  SITVTWETPVSGNGEIQNYKLYYMEKGTD-KEQDVDVSSHSYTINGLKKYTEYSFRVVAY 91

Query: 69  NHIGYGQ--ETVRYYTTPE-GPPTG 90
           N  G G     V   T  + GP +G
Sbjct: 92  NKHGPGVSTPDVAVRTLSDSGPSSG 116

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 21/86 (24%)

Query: 296 GLGRLSGKVTVKVKPEDVP---LSLRAHDVSTHSMTLSWSPPIKLNP------VKYKEVS 346
           G    SG+V  +     +P    +LRA+  S  S+T++W  P+  N       + Y E  
Sbjct: 1   GSSGSSGRVETQP-EVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKG 59

Query: 347 EKIQERR-----------LQKYGQYR 361
              ++             L+KY +Y 
Sbjct: 60  TDKEQDVDVSSHSYTINGLKKYTEYS 85

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score = 80.9 bits (200), Expect = 9e-19
 Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 9/112 (8%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKF---------HKKI 132
            + E  P   P N+  +     +  + WDP       G +  Y + +         +++ 
Sbjct: 8   HSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRH 67

Query: 133 DANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
               ++    ++T  +   LE    Y+  V+ +   G GP SP     T   
Sbjct: 68  IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score = 72.8 bits (179), Expect = 6e-16
 Identities = 30/130 (23%), Positives = 41/130 (31%), Gaps = 26/130 (20%)

Query: 187 RAPLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTMTAVEDLDEWSQKSIPLTES 244
            AP  V+    +    EV W PVP    RG + GY+I+Y          W  +S      
Sbjct: 16  VAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYY----------WKTQSSSKRNR 65

Query: 245 SNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV 304
            +I +   T    +                 L  LE F+ Y + V      G G  S   
Sbjct: 66  RHIEKKILTFQGSK-------------THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDR 112

Query: 305 TVKVKPEDVP 314
                PE   
Sbjct: 113 VFN-TPEGSG 121

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 21/97 (21%), Positives = 29/97 (29%), Gaps = 14/97 (14%)

Query: 9   TIELVWSQPTQTY--GEILGYRVKY---------GVREHTLKENLVNSKNMSFLITNLER 57
             E+ W         G + GYR+ Y           R    K           ++  LE 
Sbjct: 30  LAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEP 89

Query: 58  GVEYEFRIAGQNHIGYGQE-TVRYYTTPEGPPTGPPA 93
              Y   +   N  G G     R + TPEG    P +
Sbjct: 90  FSHYTLNVRVVNGKGEGPASPDRVFNTPEGSG--PSS 124

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 81.6 bits (201), Expect = 3e-18
 Identities = 29/183 (15%), Positives = 60/183 (32%), Gaps = 26/183 (14%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           +  + W+ P      I  Y +++         KE  +     S+ I  L+ GV YE ++ 
Sbjct: 17  SHPIQWNAPQP--SHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLI 74

Query: 67  GQNHIGYGQETVRYYTT---------------PEGPPTGPPANISHHFQTPDVVCITWDP 111
                G+ + T   +TT                         + S    T     ++W  
Sbjct: 75  SIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVS 134

Query: 112 PLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKAG 169
                 +  +  + V++    + +   + +  +T T     +L  G +Y   V  I++ G
Sbjct: 135 A-----SDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDG 189

Query: 170 PGP 172
              
Sbjct: 190 EQS 192

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 58.9 bits (142), Expect = 2e-10
 Identities = 32/228 (14%), Positives = 63/228 (27%), Gaps = 58/228 (25%)

Query: 91  PPANISHHFQ--TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN--VIHRNTTQTK 146
            P  +        P+   I W+ P    +   I  Y +++  K                 
Sbjct: 2   GPVEVFITETPSQPNSHPIQWNAP----QPSHISKYILRWRPKNSVGRWKEATIPGHLNS 57

Query: 147 AVFSNLEEGIEYSAEVQAITKAGPGPWSPK------------LSLMTARDMVRAPLGVKA 194
                L+ G+ Y  ++ +I + G    +               + +T      +PL   +
Sbjct: 58  YTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATS 117

Query: 195 L---ATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIF 251
                 +  S  V W         + G+++ Y ++                         
Sbjct: 118 ESVTEITASSFVVSWVSAS---DTVSGFRVEYELS------------------------- 149

Query: 252 YTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLG 298
                 E+ DE     +P T  S  +  L    +Y V V   + +G  
Sbjct: 150 ------EEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQ 191

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 50.8 bits (121), Expect = 1e-07
 Identities = 17/164 (10%), Positives = 37/164 (22%), Gaps = 49/164 (29%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
             + +    +   S  + W   P     I  Y + +       +  W + +IP   +S  
Sbjct: 4   VEVFITETPSQPNSHPIQWNA-PQP-SHISKYILRWR--PKNSVGRWKEATIPGHLNS-- 57

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                       +  L+    Y   + +    G   ++      
Sbjct: 58  --------------------------YTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 91

Query: 308 VKPED-----------------VPLSLRAHDVSTHSMTLSWSPP 334
                                 V  S    +++  S  +SW   
Sbjct: 92  TSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA 135

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 48.5 bits (115), Expect = 7e-07
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 5/77 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT--LKENLVNSKNMSFLITNLERGVEYEFRIA 66
           +  + W   +     + G+RV+Y + E     +   + S   S  I +L  G +Y   + 
Sbjct: 127 SFVVSWVSAS---DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVY 183

Query: 67  GQNHIGYGQETVRYYTT 83
             +  G     +    T
Sbjct: 184 QISEDGEQSLILSTSQT 200

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 78.7 bits (194), Expect = 3e-18
 Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 4/103 (3%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
           +   G  +    ++    + P  + +TW      +  G  + Y +    +   +   H+ 
Sbjct: 3   SGSSGAESLSGLSLKLVKKEPRQLELTWAGSRPRNPGG-NLSYELHVLNQ---DEEWHQM 58

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
             + + + + L+    Y   V+ +T  GPGP+SP     T+  
Sbjct: 59  VLEPRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 101

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 55.2 bits (133), Expect = 7e-10
 Identities = 25/130 (19%), Positives = 37/130 (28%), Gaps = 36/130 (27%)

Query: 188 APLGVKALATSDQSVEV-WWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSN 246
           + L +K +    + +E+ W    P   G  L Y++          +EW Q  +       
Sbjct: 12  SGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVL----NQDEEWHQMVL------- 60

Query: 247 IARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV 306
                                        LT L+  T Y V V   T  G G  S     
Sbjct: 61  ------------------------EPRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEF 96

Query: 307 KVKPEDVPLS 316
           +  P   P S
Sbjct: 97  RTSPPSGPSS 106

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 47.1 bits (112), Expect = 5e-07
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 6/85 (7%)

Query: 7   EVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           ++ +    S+P    G  L Y +    ++    E          L+T L+    Y  R+ 
Sbjct: 25  QLELTWAGSRPRNPGG-NLSYELHVLNQDE---EWHQMVLEPRVLLTKLQPDTTYIVRVR 80

Query: 67  GQNHIGYGQ--ETVRYYTTPEGPPT 89
               +G G       + T+P   P+
Sbjct: 81  TLTPLGPGPFSPDHEFRTSPPSGPS 105

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score = 77.1 bits (190), Expect = 1e-17
 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 82  TTPEGPPTGPPA-NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR 140
           ++    P  P    +S   +   V+   W PP+  H +G I  Y V++ +   +     +
Sbjct: 2   SSGSSGPDAPRNLQLSLPREAEGVIVGHWAPPI--HTHGLIREYIVEYSRS-GSKMWASQ 58

Query: 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
                     NL     Y+  V A+T  G G WS   S+ T
Sbjct: 59  RAASNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITT 99

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score = 61.7 bits (150), Expect = 4e-12
 Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 4/85 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
            I   W+ P  T+G I  Y V+Y      +  +   + N    I NL     Y  R+A  
Sbjct: 25  VIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRAASN-FTEIKNLLVNTLYTVRVAAV 83

Query: 69  NHIGYGQ--ETVRYYTT-PEGPPTG 90
              G G   ++    T    GP +G
Sbjct: 84  TSRGIGNWSDSKSITTIKGSGPSSG 108

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 24/131 (18%), Positives = 38/131 (29%), Gaps = 35/131 (26%)

Query: 188 AP--LGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS 245
           AP  L +     ++  +   W P     G I  Y + Y+                     
Sbjct: 10  APRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSR-------------------- 49

Query: 246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT 305
                            W+ +    +   E+ +L   T Y V VAA T  G+G  S   +
Sbjct: 50  ------------SGSKMWASQRAA-SNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKS 96

Query: 306 VKVKPEDVPLS 316
           +       P S
Sbjct: 97  ITTIKGSGPSS 107

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 76.8 bits (189), Expect = 2e-17
 Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 4/105 (3%)

Query: 72  GYGQETVRYY-TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHK 130
           G    +     TT + PP+ PP N+  +  T   V + W+         ++  Y V +  
Sbjct: 1   GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRT 59

Query: 131 KIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
              + N +    T   +    L    +Y  EV+A T  G G  S 
Sbjct: 60  --SSQNNVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSE 102

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 70.6 bits (173), Expect = 4e-15
 Identities = 24/150 (16%), Positives = 48/150 (32%), Gaps = 36/150 (24%)

Query: 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTMT 226
           G    S  +++ T +     P G      +D  V + W+ V A     ++ GY++FY  +
Sbjct: 1   GSSGSSGTVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTS 60

Query: 227 AVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYA 286
                                              + + + +   +++    L    +Y 
Sbjct: 61  ----------------------------------SQNNVQVLNTNKTSAELVLPIKEDYI 86

Query: 287 VAVAARTVNGLGRLSGKVTVKVKPEDVPLS 316
           + V A T  G G  S ++ +       P S
Sbjct: 87  IEVKATTDGGDGTSSEQIRIPRITSSGPSS 116

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 52.1 bits (125), Expect = 9e-09
 Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 6/85 (7%)

Query: 9   TIELVWSQP--TQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
            + L W Q    +   E+ GY+V Y  R  +     V + N +     L    +Y   + 
Sbjct: 33  KVLLNWEQVKAMENESEVTGYKVFY--RTSSQNNVQVLNTNKTSAELVLPIKEDYIIEVK 90

Query: 67  GQNHIGYGQ--ETVRYYTTPEGPPT 89
                G G   E +R        P+
Sbjct: 91  ATTDGGDGTSSEQIRIPRITSSGPS 115

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* Length = 314

 Score = 81.1 bits (199), Expect = 3e-17
 Identities = 40/301 (13%), Positives = 87/301 (28%), Gaps = 29/301 (9%)

Query: 9   TIELVWSQPTQTYGE-ILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
           T+   W+ P        L Y   +G ++          +    +   L   +  +     
Sbjct: 19  TVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAP----ETRRSIEVPLNERICLQVGSQC 74

Query: 68  QNHIGYGQ--ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL-Y 124
             +          +  + PEG P      +   +     +  +W P   T  +    L Y
Sbjct: 75  STNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYY 134

Query: 125 NVKFHKKIDANNVIHRNTTQTKAVF--SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
             +  +KI     I R        F  + +++       VQ + K   G   P  +++  
Sbjct: 135 WHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVPL 194

Query: 183 RDMVR-APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPL 241
              V+  P  +K L+  +  + V W+       + L Y++          +  +   +  
Sbjct: 195 TSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNN---SQTETHNVFYVQE 251

Query: 242 TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
            +  N                  +++V  T    +  +   T   V +  +T        
Sbjct: 252 AKCEN---------------PEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDD 296

Query: 302 G 302
            
Sbjct: 297 K 297

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* Length = 314

 Score = 72.6 bits (177), Expect = 2e-14
 Identities = 40/271 (14%), Positives = 72/271 (26%), Gaps = 43/271 (15%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKA 147
              P  N+S   +    V  TW+PP     N  +  Y   F  K    +      T+   
Sbjct: 3   TQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLW-YFSHFGDK---QDKKIAPETRRSI 58

Query: 148 VFSNLEEGIEYSAEVQAITKAG--PGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVW 205
               L E I      Q  T     P     K       D   A   ++ +  +   ++  
Sbjct: 59  EV-PLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCS 117

Query: 206 WKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ 265
           W P          Y ++Y   ++E + +         E       F              
Sbjct: 118 WLPGRNT-SPDTNYTLYYWHRSLEKIHQCENIF---REGQYFGCSF-------------- 159

Query: 266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR---LSGKVTVKVKPEDVPLSLRAHDV 322
                           F +++V +  +   G  +       +T +VKP+  P  ++    
Sbjct: 160 -------DLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPD--PPHIKNLSF 210

Query: 323 STHSMTLSWSPPIKLNP------VKYKEVSE 347
               + + W  P           V+      
Sbjct: 211 HNDDLYVQWENPQNFISRCLFYEVEVNNSQT 241

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score = 81.8 bits (201), Expect = 5e-17
 Identities = 28/186 (15%), Positives = 50/186 (26%), Gaps = 16/186 (8%)

Query: 9   TIELVWSQPTQTY---GEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERGVEYE 62
            I   W+    T         Y +     G      +     +++   L   L     Y 
Sbjct: 297 EIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYN 356

Query: 63  FRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIV 122
           F +   N +G  Q T+    T +  P   P +          V ++W  P   +      
Sbjct: 357 FTLNAHNPLGRSQSTILVNITEKVYP-HTPTSFKVKDINSTAVKLSWHLP--GNFAKINF 413

Query: 123 LYNVKFHKKIDAN-----NVIHRNTTQTKAVFSNLEEGIEYSAEVQAIT--KAGPGPWSP 175
           L  ++  K           +     +        L     Y+  ++  T        WS 
Sbjct: 414 LCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSN 473

Query: 176 KLSLMT 181
           K   +T
Sbjct: 474 KKQHLT 479

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score = 79.1 bits (194), Expect = 4e-16
 Identities = 34/259 (13%), Positives = 71/259 (27%), Gaps = 37/259 (14%)

Query: 44  NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPD 103
           + +N++  I N+           G N +   ++ +       G P   P  ++       
Sbjct: 242 DGENVAIKIRNISVSASS-----GTNVVFTTEDNIFGTVIFAGYPPDTPQQLNCETHDLK 296

Query: 104 VVCITWDPPLRTHRNG-QIVLYNVKF---HKKIDANNVIHRNTTQTKAVFSNLEEGIEYS 159
            +  +W+P   T   G +   Y +      K +             + +F  L     Y+
Sbjct: 297 EIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYN 356

Query: 160 AEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGY 219
             + A    G    +  +++ T +     P   K    +  +V++ W             
Sbjct: 357 FTLNAHNPLGRSQSTILVNI-TEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLC 415

Query: 220 QIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSL 279
           +I         + E    +I   E+S                         +    L  L
Sbjct: 416 EIEI--KKSNSVQEQRNVTIQGVENS-------------------------SYLVALDKL 448

Query: 280 EKFTEYAVAVAARTVNGLG 298
             +T Y   +   T     
Sbjct: 449 NPYTLYTFRIRCSTETFWK 467

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score = 55.2 bits (132), Expect = 2e-08
 Identities = 40/352 (11%), Positives = 83/352 (23%), Gaps = 55/352 (15%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           T+ L W+     +        +  V     KE++   K ++   T   +   + +  A  
Sbjct: 101 TLYLKWNDRGSVFPHRSNVIWEIKVLR---KESMELVKLVTHQTTLNGKDTLHHWSWASD 157

Query: 69  NHIGYGQETVRYYTTPEGPPTGPPANISHH-----FQTPDVVCITWDPPLRTHRNG---- 119
             +      V      +          S                   P  +    G    
Sbjct: 158 MPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDSQTKVFPQDKVILVGSDIT 217

Query: 120 ---QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPK 176
                    +          +IH +         N+         V   T+         
Sbjct: 218 FCCVSQEKVLSALIGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTTEDNIFG---- 273

Query: 177 LSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGR---GKILGYQIFYTMTAVEDLDE 233
            +++ A      P  +       + +   W P         +   Y +  +         
Sbjct: 274 -TVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVES---FSGKYV 329

Query: 234 WSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAART 293
             +++   T  S                                 L     Y   + A  
Sbjct: 330 RLKRAEAPTNESY--------------------------QLLFQMLPNQEIYNFTLNAHN 363

Query: 294 VNGLGRLSGKVTV--KVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYK 343
             G  + +  V +  KV P   P S +  D+++ ++ LSW  P     + + 
Sbjct: 364 PLGRSQSTILVNITEKVYP-HTPTSFKVKDINSTAVKLSWHLPGNFAKINFL 414

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483

 Score = 44.4 bits (104), Expect = 4e-05
 Identities = 42/322 (13%), Positives = 77/322 (23%), Gaps = 33/322 (10%)

Query: 14  WSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGY 73
           W  P+ T     G    Y V       +    +  S  I  L  G +YE  I   +  G 
Sbjct: 16  WKAPSGT-----GRGTDYEVCIEQRSRSCYQLEKTSIKIPALSHG-DYEITINSLHDFGS 69

Query: 74  GQETVRYYTTPEGPPTGPPANISHHFQTP-DVVCITWDPPLRTHRNGQIVLYNVKFHKKI 132
                             P  +          + + W+       +   V++ +K  +K 
Sbjct: 70  STSKFTLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVLRK- 128

Query: 133 DANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGV 192
           ++  ++   T               +   +          W+  + L  A   V     +
Sbjct: 129 ESMELVKLVT---------------HQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYI 173

Query: 193 KALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFY 252
             L  S       W PV             +             K I +        +  
Sbjct: 174 DNLHFSGLEEWSDWSPVKQISWIPDSQTKVF----------PQDKVILVGSDITFCCVSQ 223

Query: 253 TMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED 312
                  +   +   + L        +   +  A +           + G V     P D
Sbjct: 224 EKVLSALIGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTTEDNIFGTVIFAGYPPD 283

Query: 313 VPLSLRAHDVSTHSMTLSWSPP 334
            P  L         +  SW+P 
Sbjct: 284 TPQQLNCETHDLKEIICSWNPG 305

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 74.4 bits (183), Expect = 2e-16
 Identities = 28/148 (18%), Positives = 44/148 (29%), Gaps = 30/148 (20%)

Query: 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAV 228
           G    S    + T  D+      +      D S++V W+      G + GY+I +     
Sbjct: 1   GSSGSSGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISW--EEY 58

Query: 229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVA 288
              +      +P                             +T    +T L   T Y + 
Sbjct: 59  NRTNTRVTHYLP----------------------------NVTLEYRVTGLTALTTYTIE 90

Query: 289 VAARTVNGLGRLSGKVTVKVKPEDVPLS 316
           VAA T  G G++S        P   P S
Sbjct: 91  VAAMTSKGQGQVSASTISSGVPPSGPSS 118

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 74.0 bits (182), Expect = 2e-16
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK--IDANNVIH 139
            T E  P GP  ++S        + ++W  P    +NG +  Y + + +    +     +
Sbjct: 12  RTHEDVP-GPVGHLSFSEILDTSLKVSWQEPG--EKNGILTGYRISWEEYNRTNTRVTHY 68

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
                 +   + L     Y+ EV A+T  G G  S 
Sbjct: 69  LPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSA 104

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 68.2 bits (167), Expect = 2e-14
 Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           ++++ W +P +  G + GYR+ +    R +T   + + +  + + +T L     Y   +A
Sbjct: 33  SLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVA 92

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPAN 94
                G GQ +    T   G P   P++
Sbjct: 93  AMTSKGQGQVSAS--TISSGVPPSGPSS 118

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 10/62 (16%)

Query: 296 GLGRLSGKVTVKVKPEDVP---LSLRAHDVSTHSMTLSWSPPIKLN------PVKYKEVS 346
           G    SG   V+   EDVP     L   ++   S+ +SW  P + N       + ++E +
Sbjct: 1   GSSGSSGPQLVRT-HEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYN 59

Query: 347 EK 348
             
Sbjct: 60  RT 61

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score = 73.3 bits (180), Expect = 3e-16
 Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 30/131 (22%)

Query: 188 APLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS 245
            P      A ++ ++ + W  +PA      I G+ I+Y  T  ++  ++ +  +      
Sbjct: 11  GPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRY- 69

Query: 246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT 305
                                         ++ L+  T Y + +      G    S  + 
Sbjct: 70  ---------------------------WHSISHLQPETSYDIKMQCFNEGGESEFSNVMI 102

Query: 306 VKVKPEDVPLS 316
            + K    P S
Sbjct: 103 CETKARSGPSS 113

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score = 72.1 bits (177), Expect = 8e-16
 Identities = 13/104 (12%), Positives = 31/104 (29%), Gaps = 4/104 (3%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN----V 137
           ++    P   P            + + W     ++ N  I  + + +      N+     
Sbjct: 2   SSGSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKK 61

Query: 138 IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
                 +     S+L+    Y  ++Q   + G   +S  +   T
Sbjct: 62  DMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICET 105

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 114

 Score = 52.9 bits (127), Expect = 5e-09
 Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 8/89 (8%)

Query: 9   TIELVWSQPTQTY--GEILGYRVKY----GVREHTLKENLVNSKNMSFLITNLERGVEYE 62
           TI L W     +     I G+ + Y       +   K+++V        I++L+    Y+
Sbjct: 24  TIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYD 83

Query: 63  FRIAGQNHIGYGQ--ETVRYYTTPEGPPT 89
            ++   N  G  +    +   T     P+
Sbjct: 84  IKMQCFNEGGESEFSNVMICETKARSGPS 112

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 72.8 bits (179), Expect = 5e-16
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 8/109 (7%)

Query: 82  TTPEGPPTGPPANISHHFQ--TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN---- 135
           ++    PT  P +++   +   P  V ++W PPL    NG+I  Y + +    +      
Sbjct: 2   SSGSSGPTSAPKDLTVITREGKPRAVIVSWQPPL--EANGKITAYILFYTLDKNIPIDDW 59

Query: 136 NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
            +   +  +      +L     Y   +QA    G GP S  +   T + 
Sbjct: 60  IMETISGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKV 108

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 66.3 bits (162), Expect = 1e-13
 Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 30/131 (22%)

Query: 188 AP--LGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS 245
           AP  L V       ++V V W+P     GKI  Y +FYT+     +D+W  ++I      
Sbjct: 11  APKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGD--- 67

Query: 246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT 305
                                      + ++  L   T Y   + AR   G+G LS  + 
Sbjct: 68  -------------------------RLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPIL 102

Query: 306 VKVKPEDVPLS 316
            +      P S
Sbjct: 103 FRTLKVSGPSS 113

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114

 Score = 65.5 bits (160), Expect = 2e-13
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY----GVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
            + + W  P +  G+I  Y + Y     +         ++   ++  I +L     Y FR
Sbjct: 26  AVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFR 85

Query: 65  IAGQNHIGYGQ--ETVRYYTTPEGPPTG 90
           I  +N  G G   + + + T     P+ 
Sbjct: 86  IQARNSKGVGPLSDPILFRTLKVSGPSS 113

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215

 Score = 75.0 bits (184), Expect = 9e-16
 Identities = 26/175 (14%), Positives = 62/175 (35%), Gaps = 11/175 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
            +   W    +T      + +K      +    +   ++     +  +    V  E  + 
Sbjct: 23  KMRCEWDGGRET-HLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVE 81

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHF--QTPDVVCITWDPPLRTHRNGQIVLY 124
            +N +G        +         PP N+S     +   ++ +TW  P  + ++  I+ Y
Sbjct: 82  AENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNP--SIKSVIILKY 139

Query: 125 NVKFHKKIDAN----NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
           N+++  K  +           +T++     +L+   EY   ++ + + G G WS 
Sbjct: 140 NIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSD 194

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215

 Score = 66.2 bits (161), Expect = 1e-12
 Identities = 42/237 (17%), Positives = 68/237 (28%), Gaps = 35/237 (14%)

Query: 83  TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT 142
              G P   P N+S        +   WD    TH      L   ++     A+    R+T
Sbjct: 2   GSSGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLK-SEWATHKFADCKAKRDT 60

Query: 143 TQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQ-- 200
             +  V  +    +     V+A    G             +     P  +  + + +   
Sbjct: 61  PTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSS 120

Query: 201 SVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL 260
            +++ W         IL Y I Y     +D   WSQ     T S+               
Sbjct: 121 ILKLTWTNPSIKSVIILKYNIQYR---TKDASTWSQIPPEDTAST--------------- 162

Query: 261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS---GKVTVKVKPEDVP 314
                       S  +  L+ FTEY   +     +G G  S    + +     ED P
Sbjct: 163 ----------RSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGIT-YEDRP 208

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215

 Score = 59.2 bits (143), Expect = 2e-10
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 3   KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREH----TLKENLVNSKNMSFLITNLERG 58
            EE    ++L W+ P+     IL Y ++Y  ++      +      S   SF + +L+  
Sbjct: 115 SEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPF 174

Query: 59  VEYEFRIAGQNHIGYGQ-----ETVRYYTTPEGPPTGPP 92
            EY FRI      G G      E      T E  P+  P
Sbjct: 175 TEYVFRIRCMKEDGKGYWSDWSEEA-SGITYEDRPSKEP 212

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 71.8 bits (176), Expect = 1e-15
 Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 3/103 (2%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPL--RTHRNGQIVLYNVKFHKKIDAN-NVI 138
           ++    P  PP  +     + D + ITW      +  +      Y V++   I AN    
Sbjct: 2   SSGSSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYK 61

Query: 139 HRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
           + N T    + + L+    Y   V          WS      T
Sbjct: 62  NANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTT 104

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 18/128 (14%), Positives = 33/128 (25%), Gaps = 30/128 (23%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P+GV+A   S  ++ + W      + + +    +YT                       
Sbjct: 11  PPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYT----------------------- 47

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV 306
             + +             K+   T  S  +T L+  T Y  +V           S     
Sbjct: 48  --VRWKT---NIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHG 102

Query: 307 KVKPEDVP 314
               E   
Sbjct: 103 TT-FELSG 109

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 7/88 (7%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVR-----EHTLKENLVNSKNMSFLITNLERGVEYEF 63
           TI + W+  +    + +     Y VR         K    N+  +S+L+T L+    YEF
Sbjct: 24  TIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEF 83

Query: 64  RIAGQNHIGYGQ--ETVRYYTTPEGPPT 89
            +             T    T     P+
Sbjct: 84  SVMVTKGRRSSTWSMTAHGTTFELSGPS 111

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303

 Score = 76.0 bits (186), Expect = 1e-15
 Identities = 28/175 (16%), Positives = 64/175 (36%), Gaps = 11/175 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKE--NLVNSKNMSFLITNLERGVEYEFRIA 66
            +   W    +T+ E   + +K     H   +     ++     +  +    V  E  + 
Sbjct: 119 KMRCEWDGGRETHLET-NFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVE 177

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHF--QTPDVVCITWDPPLRTHRNGQIVLY 124
            +N +G        +         PP N+S     +   ++ +TW  P  + ++  I+ Y
Sbjct: 178 AENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNP--SIKSVIILKY 235

Query: 125 NVKFHKKIDAN----NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
           N+++  K  +           +T++     +L+   EY   ++ + + G G WS 
Sbjct: 236 NIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSD 290

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303

 Score = 69.1 bits (168), Expect = 3e-13
 Identities = 46/300 (15%), Positives = 83/300 (27%), Gaps = 38/300 (12%)

Query: 8   VTIELVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERG-VEYEF 63
            T   V  +    Y  +    + +          +  ++N    S   T++    ++   
Sbjct: 22  FTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTC 81

Query: 64  RIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
            I     +      +       G P   P N+S        +   WD    TH      L
Sbjct: 82  NILTFGQLEQNVYGITII---SGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTL 138

Query: 124 YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
              ++     A+    R+T  +  V  +    +     V+A    G             +
Sbjct: 139 K-SEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYK 197

Query: 184 DMVRAPLGVKALATSDQ--SVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPL 241
                P  +  + + +    +++ W         IL Y I Y     +D   WSQ     
Sbjct: 198 VKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRT---KDASTWSQIPPED 254

Query: 242 TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
           T S+                           S  +  L+ FTEY   +     +G G  S
Sbjct: 255 TAST-------------------------RSSFTVQDLKPFTEYVFRIRCMKEDGKGYWS 289

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 72.1 bits (177), Expect = 1e-15
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           +I + W+ P      + GY + YG+     +   V+ K   + I NL+    Y   +   
Sbjct: 42  SIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAF 101

Query: 69  NHIGYGQ---ETVRYYTTPEGPPTG 90
           N++G G    E+        GP +G
Sbjct: 102 NNVGEGIPLYESAVTRPHTSGPSSG 126

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 64.4 bits (157), Expect = 6e-13
 Identities = 22/156 (14%), Positives = 37/156 (23%), Gaps = 41/156 (26%)

Query: 166 TKAGPGPWSPKLSLMTARDMVR------APLGVKALATSDQSVEVWWKPVPAGRGKILGY 219
           +    GP +  LS  T    +        P  +        S+ V W P       + GY
Sbjct: 2   SSGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVT-SIVVSWTPPENQNIVVRGY 60

Query: 220 QIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSL 279
            I Y                                 +      + K         + +L
Sbjct: 61  AIGYG--------------------------------IGSPHAQTIKVDYKQRYYTIENL 88

Query: 280 EKFTEYAVAVAARTVNGLGR-LSGKVTVKVKPEDVP 314
           +  + Y + + A    G G  L      +      P
Sbjct: 89  DPSSHYVITLKAFNNVGEGIPLYESAVTRPH-TSGP 123

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 63.6 bits (155), Expect = 1e-12
 Identities = 19/123 (15%), Positives = 35/123 (28%), Gaps = 10/123 (8%)

Query: 69  NHIGYGQET-VRYYTTPEGPPT-----GPPANISHHFQTPDVVCITWDPPLRTHRNGQIV 122
           +    G  T      T E           P+++         + ++W PP   ++N  + 
Sbjct: 2   SSGSSGPATDWLSAETFESDLDETRVPEVPSSLHVR-PLVTSIVVSWTPP--ENQNIVVR 58

Query: 123 LYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPG-PWSPKLSLMT 181
            Y + +         I  +  Q      NL+    Y   ++A    G G P         
Sbjct: 59  GYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRP 118

Query: 182 ARD 184
              
Sbjct: 119 HTS 121

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* Length = 414

 Score = 76.2 bits (186), Expect = 2e-15
 Identities = 54/314 (17%), Positives = 86/314 (27%), Gaps = 51/314 (16%)

Query: 14  WSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGY 73
            S      G    Y +        ++E  + +      I  L     Y  ++       +
Sbjct: 130 DSVMWALDGLSFTYSLVIWKNSSGVEER-IENIYSRHKIYKLSPETTYCLKVKAALLTSW 188

Query: 74  GQ---ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHK 130
                  V    T       PP NI    Q  + V + WD           V +   F K
Sbjct: 189 KIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYV-LKWDYT--YANMTFQVQWLHAFLK 245

Query: 131 KIDANNVIH-------RNTTQTKAVFS-NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
           +   N++          N   T+ VF  N+ +   Y   VQA        WS ++   T 
Sbjct: 246 RNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTE 305

Query: 183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKIL--GYQIFYTMTAVEDLDEWSQKSIP 240
                 P      + SD S  ++           +   Y + Y                 
Sbjct: 306 IQAFLLPPVFNIRSLSD-SFHIYIGAPKQSGNTPVIQDYPLIY----------------- 347

Query: 241 LTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAART----VNG 296
                    I +     E+     +K +       + +L+  T Y V   A T    +N 
Sbjct: 348 --------EIIFW----ENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNK 395

Query: 297 LGRLSGKVTVKVKP 310
               S  V  K KP
Sbjct: 396 SSVFSDAVCEKTKP 409

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* Length = 414

 Score = 61.6 bits (148), Expect = 2e-10
 Identities = 42/335 (12%), Positives = 91/335 (27%), Gaps = 40/335 (11%)

Query: 12  LVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLIT--NLERGVEYEFRIA 66
           L W++  ++ G +  +   Y   G+          N  +     +   L    E + RI 
Sbjct: 25  LRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR 83

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV 126
            +         V  +T       GPP    H       + I   P  +      +   + 
Sbjct: 84  AEKENTSSWYEVDSFTPFRKAQIGPPE--VHLEAEDKAIVIHISPGTKDSVMWALDGLSF 141

Query: 127 KFH---KKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAG--PGPWSPKLSLMT 181
            +     K  +          ++     L     Y  +V+A        G +SP   + T
Sbjct: 142 TYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKT 201

Query: 182 ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPL 241
             +    P     ++  +Q+  + W    A     + +   +      +      K   +
Sbjct: 202 TVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFL---KRNPGNHLYKWKQI 258

Query: 242 TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
            +  N+                       T+     ++ +   Y + V A   N     S
Sbjct: 259 PDCENVKT---------------------TQCVFPQNVFQKGIYLLRVQASDGNNTSFWS 297

Query: 302 GKVTVKVKPEDVPLSLRAHDVS--THSMTLSWSPP 334
            ++    +     L     ++   + S  +    P
Sbjct: 298 EEIKFDTE-IQAFLLPPVFNIRSLSDSFHIYIGAP 331

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 70.2 bits (172), Expect = 5e-15
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 2/86 (2%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
            I + W+ P      + GY + YGV     +   V+SK   + I  LE    Y   +   
Sbjct: 32  CIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIERLESSSHYVISLKAF 91

Query: 69  NHIGYGQETVRYYTTPEGPPTGPPAN 94
           N+ G G       TT     T  P++
Sbjct: 92  NNAGEGVPLYESATT--RSITSGPSS 115

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 6/108 (5%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
                 P   P+++       + + ++W PP   + N  +  Y + +         +  +
Sbjct: 12  LDESQVP-DQPSSLHVR-PQTNCIIMSWTPP--LNPNIVVRGYIIGYGVGSPYAETVRVD 67

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
           + Q       LE    Y   ++A   AG G   P     T R +   P
Sbjct: 68  SKQRYYSIERLESSSHYVISLKAFNNAGEGV--PLYESATTRSITSGP 113

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 60.5 bits (147), Expect = 1e-11
 Identities = 18/143 (12%), Positives = 35/143 (24%), Gaps = 34/143 (23%)

Query: 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAV 228
           G    S   + +    +   P  +     ++  + + W P       + GY I Y     
Sbjct: 1   GSSGSSGPENDLDESQVPDQPSSLHVRPQTN-CIIMSWTPPLNPNIVVRGYIIGYG---- 55

Query: 229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVA 288
                                       V      + +         +  LE  + Y ++
Sbjct: 56  ----------------------------VGSPYAETVRVDSKQRYYSIERLESSSHYVIS 87

Query: 289 VAARTVNGLGR-LSGKVTVKVKP 310
           + A    G G  L    T +   
Sbjct: 88  LKAFNNAGEGVPLYESATTRSIT 110

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 70.1 bits (172), Expect = 6e-15
 Identities = 27/148 (18%), Positives = 49/148 (33%), Gaps = 30/148 (20%)

Query: 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAV 228
           G    S K ++ ++  +  AP  V  +  S + V + W+P    +G I  + +F++    
Sbjct: 1   GSSGSSGKPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSR--- 57

Query: 229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVA 288
           E  +                                  + P +    + +L+    Y   
Sbjct: 58  EGDNRER---------------------------ALNTTQPGSLQLTVGNLKPEAMYTFR 90

Query: 289 VAARTVNGLGRLSGKVTVKVKPEDVPLS 316
           V A    G G  S  + V  +PE  P S
Sbjct: 91  VVAYNEWGPGESSQPIKVATQPESGPSS 118

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 69.0 bits (169), Expect = 1e-14
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 5/102 (4%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN--VIH 139
            +    P   P ++     +   V ++W PP      G I  + V F ++ D     +  
Sbjct: 12  PSSSVLP-SAPRDVVPVLVSSRFVRLSWRPP--AEAKGNIQTFTVFFSREGDNRERALNT 68

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
                 +    NL+    Y+  V A  + GPG  S  + + T
Sbjct: 69  TQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVAT 110

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 64.7 bits (158), Expect = 4e-13
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY----GVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
            + L W  P +  G I  + V +      RE  L  N     ++   + NL+    Y FR
Sbjct: 33  FVRLSWRPPAEAKGNIQTFTVFFSREGDNRERAL--NTTQPGSLQLTVGNLKPEAMYTFR 90

Query: 65  IAGQNHIGYGQ--ETVRYYTTPEGPPT 89
           +   N  G G+  + ++  T PE  P+
Sbjct: 91  VVAYNEWGPGESSQPIKVATQPESGPS 117

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score = 68.9 bits (169), Expect = 8e-15
 Identities = 17/124 (13%), Positives = 36/124 (29%), Gaps = 30/124 (24%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS 245
            P      A SD  + + W  +P+      I G+ I+Y  T  ++  ++ +  +      
Sbjct: 7   GPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVE----- 61

Query: 246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT 305
                                     +   +  L+  T Y + +      G    S  + 
Sbjct: 62  -----------------------GSKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMI 98

Query: 306 VKVK 309
            + K
Sbjct: 99  CETK 102

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score = 67.8 bits (166), Expect = 2e-14
 Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 4/98 (4%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTT---- 143
           P   P        +   + + W     ++ N  I  + + +      N+  ++       
Sbjct: 4   PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGS 63

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
           +   +  +L+    Y  ++Q   + G   +S  +   T
Sbjct: 64  KQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C Length = 102

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 6/72 (8%)

Query: 9  TIELVWSQP--TQTYGEILGYRVKY----GVREHTLKENLVNSKNMSFLITNLERGVEYE 62
           I L W+    +     I G+ + Y       +   K ++V       +I +L+    Y+
Sbjct: 20 QIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYD 79

Query: 63 FRIAGQNHIGYG 74
           ++   N  G  
Sbjct: 80 IKMQCFNEGGES 91

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 68.6 bits (168), Expect = 2e-14
 Identities = 31/147 (21%), Positives = 48/147 (32%), Gaps = 31/147 (21%)

Query: 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWK-PVPAGRGKILGYQIFYTMTA 227
           G    S + +  T   +  AP  V A   S + +++ W+ P     G  L Y +FYT   
Sbjct: 1   GSSGSSGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTK-- 58

Query: 228 VEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAV 287
            E +                                   S P      + +L   T Y  
Sbjct: 59  -EGIARER---------------------------VENTSHPGEMQVTIQNLMPATVYIF 90

Query: 288 AVAARTVNGLGRLSGKVTVKVKPEDVP 314
            V A+  +G G  S  + V+ +PE  P
Sbjct: 91  RVMAQNKHGSGESSAPLRVETQPESGP 117

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 66.3 bits (162), Expect = 1e-13
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 3/120 (2%)

Query: 72  GYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK 131
           G    +  +     GP    P ++     +   + +TW  P  +  +G  + Y+V + K+
Sbjct: 1   GSSGSSGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPA-SDPHGDNLTYSVFYTKE 59

Query: 132 IDAN--NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
             A        +  + +    NL     Y   V A  K G G  S  L + T  +   + 
Sbjct: 60  GIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESGPSS 119

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 9/88 (10%)

Query: 9   TIELVWSQP-TQTYGEILGYRVKY----GVREHTLKENLVNSKNMSFLITNLERGVEYEF 63
            I+L W  P +  +G+ L Y V Y      RE     N  +   M   I NL     Y F
Sbjct: 33  FIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVE--NTSHPGEMQVTIQNLMPATVYIF 90

Query: 64  RIAGQNHIGYGQ--ETVRYYTTPEGPPT 89
           R+  QN  G G+    +R  T PE  P+
Sbjct: 91  RVMAQNKHGSGESSAPLRVETQPESGPS 118

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A Length = 419

 Score = 73.5 bits (179), Expect = 2e-14
 Identities = 50/389 (12%), Positives = 109/389 (28%), Gaps = 61/389 (15%)

Query: 9   TIELVWSQPTQTYGEI---LGYRVKYGVREHT---LKENLVNSKNMSFLITNLERGVEYE 62
            I   W+        +   L  RV   + E     L +++  S             +  +
Sbjct: 18  HITCRWADTQDAQRLVNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQ 77

Query: 63  FRIAGQNHIGYGQETV-----RYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPL---- 113
             +         Q           T  +      P ++       D   +TW   L    
Sbjct: 78  SFVVTDVDYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQIST-DQDHFLLTWSVALGSPQ 136

Query: 114 RTHRNGQIVLYNVKFHKKIDANN---VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAG- 169
               +   + + V + +  D+     ++  NT+Q      +L     Y A V+     G 
Sbjct: 137 SHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGS 196

Query: 170 -----PGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYT 224
                P  WSP++   +       P  ++        +   W+         + + +FY 
Sbjct: 197 RLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEV-RKEVASSVSFGLFYK 255

Query: 225 MTA---VEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEK 281
            +       L    + S  L E        +               +P+ + A       
Sbjct: 256 PSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQ------------IPVPDPAT------ 297

Query: 282 FTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNP-- 339
             +Y V+V  R      + S  V +++ P  + ++         S +L W          
Sbjct: 298 HGQYIVSVQPRRAEKHIKSS--VNIQMAPPSLQVT-----KDGDSYSLRWETMKMRYEHI 350

Query: 340 -----VKYKEVSEKIQERRLQKYGQYRYF 363
                ++Y++ +   ++ + +        
Sbjct: 351 DHTFEIQYRKDTATWKDSKTETLQNAHSM 379

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A Length = 419

 Score = 65.8 bits (159), Expect = 6e-12
 Identities = 37/310 (11%), Positives = 74/310 (23%), Gaps = 53/310 (17%)

Query: 9   TIELVWSQPTQT------YGEILGYRVKYGVREH---TLKENLVNSKNMSFLITNLERGV 59
              L WS    +          L + V Y   +         L N+   +    +L    
Sbjct: 123 HFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSS 182

Query: 60  EYEFRIAGQNHIGYG------QETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPL 113
            Y  R+  +   G        + +       +      P N+   F    V+  +W+   
Sbjct: 183 TYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRK 242

Query: 114 RTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPW 173
               +    L+  K      +  ++                   +  ++     A  G +
Sbjct: 243 EVASSVSFGLF-YKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQY 301

Query: 174 SPKLSLMTARDMVRAPLGVK-------ALATSDQSVEVWWKPVPAGRGKILGYQIFYTMT 226
              +    A   +++ + ++            D     W             ++I Y   
Sbjct: 302 IVSVQPRRAEKHIKSSVNIQMAPPSLQVTKDGDSYSLRWETMKMRYEHIDHTFEIQYR-- 359

Query: 227 AVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYA 286
             +D   W        ++                            S  L +LE  T Y 
Sbjct: 360 --KDTATWKDSKTETLQN--------------------------AHSMALPALEPSTRYW 391

Query: 287 VAVAARTVNG 296
             V  RT   
Sbjct: 392 ARVRVRTSRT 401

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} Length = 306

 Score = 72.3 bits (176), Expect = 3e-14
 Identities = 38/301 (12%), Positives = 78/301 (25%), Gaps = 39/301 (12%)

Query: 12  LVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMS--FLITNLERGVEYEFRIA 66
           L W++  ++ G +  +   Y   G+          N  +    F    L    E + RI 
Sbjct: 21  LRWNRSDESVGNV-TFSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR 79

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHR----NGQIV 122
            +              TP       P  +         + I   P  +       +G   
Sbjct: 80  AEKE-NTSSWYEVDSFTPFRKAQIGPPEVHLE-AEDKAIVIHISPGTKDSVMWALDGLSF 137

Query: 123 LYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGP--GPWSPKLSLM 180
            Y++   K   +          ++     L     Y  +V+A        G +SP   + 
Sbjct: 138 TYSLVIWKN-SSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIK 196

Query: 181 TARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIP 240
           T  +    P     ++  +Q+  + W    A     + +   +      +      K   
Sbjct: 197 TTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFL---KRNPGNHLYKWKQ 253

Query: 241 LTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRL 300
           + +  N+                              ++ +   Y + V A   N     
Sbjct: 254 IPDCENVKTTQCVFP---------------------QNVFQKGIYLLRVQASDGNNTSFW 292

Query: 301 S 301
           S
Sbjct: 293 S 293

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} Length = 306

 Score = 63.8 bits (154), Expect = 2e-11
 Identities = 29/182 (15%), Positives = 47/182 (25%), Gaps = 19/182 (10%)

Query: 9   TIELVWSQPT------QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYE 62
            I +  S  T         G    Y +        ++E  + +      I  L     Y 
Sbjct: 115 AIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEER-IENIYSRHKIYKLSPETTYC 173

Query: 63  FRIAGQNHIG--YGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ 120
            ++          G  +  +          PP              + WD          
Sbjct: 174 LKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYAN--MTF 231

Query: 121 IVLYNVKFHKKIDANNVIH-------RNTTQTKAVFS-NLEEGIEYSAEVQAITKAGPGP 172
            V +   F K+   N++          N   T+ VF  N+ +   Y   VQA        
Sbjct: 232 QVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSF 291

Query: 173 WS 174
           WS
Sbjct: 292 WS 293

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* Length = 380

 Score = 72.9 bits (178), Expect = 3e-14
 Identities = 33/299 (11%), Positives = 77/299 (25%), Gaps = 48/299 (16%)

Query: 9   TIELVWSQPTQT---YGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
            + L W  P          + Y +KY        + ++          +L +G+E     
Sbjct: 48  YLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTIITKNLHYKDGFDLNKGIEAXIHT 107

Query: 66  AGQNHIGYGQE------TVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG 119
                   G E         Y+ +P+G P     ++   +     +  +W P +    + 
Sbjct: 108 LLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGVLLDT 167

Query: 120 QIVLY--NVKFHKKIDANNVIHRNTTQTKAVF--SNLEEGIEYSAEVQAITKAGPGPWSP 175
              L+         +   + I  +       F      +  ++   V   ++  P   S 
Sbjct: 168 NYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSSY 227

Query: 176 KLSLMTARDMVRAPLGVKALATSDQSVEVWWK-PVPAGRGKILGYQIFYTMTAVEDLDEW 234
               +        P+ +     S   +++ W  P+     +   Y+I             
Sbjct: 228 FTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIRED-------- 279

Query: 235 SQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAART 293
                                     D     +    E+  L +  +  +    V ++ 
Sbjct: 280 --------------------------DTTLVTATVENETYTLKTTNETRQLCFVVRSKV 312

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* Length = 380

 Score = 68.7 bits (167), Expect = 7e-13
 Identities = 41/287 (14%), Positives = 76/287 (26%), Gaps = 43/287 (14%)

Query: 82  TTPEGPPTGPPANIS-HHFQTPDVVCITWDPPLRT-HRNGQIVLYNVKFHKKIDANNVIH 139
           ++       PP +           + + W PPL   H     V Y +K+           
Sbjct: 25  SSDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTI 84

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPG-----PWSPKLSLMTARDMVRA-PLGVK 193
                      +L +GIE         +   G      W+     ++ + +       + 
Sbjct: 85  ITKNLHYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMD 144

Query: 194 ALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYT 253
            +  + Q +   WKP          Y +FY     E LD   Q    +        I   
Sbjct: 145 CVYYNWQYLLCSWKPGIGV-LLDTNYNLFYWY---EGLDHALQCVDYIKADGQ--NIGCR 198

Query: 254 MTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV--TVKVKPE 311
                                       + ++ + V   + N   R S        +   
Sbjct: 199 FP--------------------YLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVKP 238

Query: 312 DVPLSLRAHDVSTHSMTLSWSPPIKLNP-------VKYKEVSEKIQE 351
             P+ L     S+  + L WS P+   P       ++ +E    +  
Sbjct: 239 LPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVT 285

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* Length = 380

 Score = 64.1 bits (155), Expect = 2e-11
 Identities = 16/175 (9%), Positives = 41/175 (23%), Gaps = 12/175 (6%)

Query: 9   TIELVWSQPTQTYGEI---LGYRVKYGVREHTLKENLVNSKNM---SFLITNLERGVEYE 62
            +   W        +    L Y  +         + +          F         ++ 
Sbjct: 152 YLLCSWKPGIGVLLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFY 211

Query: 63  FRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIV 122
             + G +     + +   +         PP  ++   ++   + + W  PL         
Sbjct: 212 ICVNGSSENKPIRSSYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFD 271

Query: 123 LYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK---AGPGPWS 174
            Y ++  +                       E  +    V++      +  G WS
Sbjct: 272 -YEIEIREDDTTLVTATVENETYT--LKTTNETRQLCFVVRSKVNIYCSDDGIWS 323

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} Length = 114

 Score = 65.2 bits (159), Expect = 2e-13
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 2/92 (2%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVR--EHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           + +L  ++       IL Y VKY  +  E    E  V       ++ +L+  + YE +I 
Sbjct: 23  SFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQIT 82

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHH 98
             N +GY + TV  ++ P  P      +  HH
Sbjct: 83  AANRLGYSEPTVYEFSMPPKPNIIKDHHHHHH 114

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} Length = 114

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 6/96 (6%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIH 139
                 P  PP+       +     ++            I+ Y VK+  K   +      
Sbjct: 3   EASMREP-SPPSIHGQP-SSGKSFKLSITKQ--DDGGAPILEYIVKYRSKDKEDQWLEKK 58

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
               +   +  +L+  + Y  ++ A  + G    + 
Sbjct: 59  VQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTV 94

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
             ++ W  P     ++  YR+++G       +       +S+ I  L     Y  R+   
Sbjct: 23  CAQVNWEVPLSNGTDVTEYRLEWG-GVEGSMQICYCGPGLSYEIKGLSPATTYYCRVQAL 81

Query: 69  NHIGYGQ--ETVRYYTTPEGPPT 89
           + +G G   E V   T P   P+
Sbjct: 82  SVVGAGPFSEVVACVTPPSSGPS 104

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 4/100 (4%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
           ++    P           ++     + W+ P        +  Y ++    ++ +  I   
Sbjct: 2   SSGSSGP-DQCKPPQVTCRSATCAQVNWEVP--LSNGTDVTEYRLE-WGGVEGSMQICYC 57

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
                     L     Y   VQA++  G GP+S  ++ +T
Sbjct: 58  GPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVT 97

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 49.6 bits (119), Expect = 6e-08
 Identities = 18/127 (14%), Positives = 28/127 (22%), Gaps = 33/127 (25%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
                +    S    +V W+   +    +  Y++ +                        
Sbjct: 10  QCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWG----------------------- 46

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                    S E+  L   T Y   V A +V G G  S  V   
Sbjct: 47  ----------GVEGSMQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACV 96

Query: 308 VKPEDVP 314
             P   P
Sbjct: 97  TPPSSGP 103

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 68.7 bits (167), Expect = 5e-13
 Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 3/143 (2%)

Query: 35  EHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPAN 94
           +   + +  + K    L         Y   +   + +G      + +         PPAN
Sbjct: 143 QEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPAN 202

Query: 95  ISHHF--QTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN-NVIHRNTTQTKAVFSN 151
           I+     + P  + +TW  P   + +   + + +++  +             Q   V  +
Sbjct: 203 ITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHD 262

Query: 152 LEEGIEYSAEVQAITKAGPGPWS 174
              G+ +  +++A  + G G WS
Sbjct: 263 AWSGLRHVVQLRAQEEFGQGEWS 285

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 53.7 bits (128), Expect = 4e-08
 Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 6/109 (5%)

Query: 9   TIELVWSQPT--QTYGEILGYRVKY-GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
            + + W  P    +    L + ++Y   R  T    +V       +I +   G+ +  ++
Sbjct: 214 WLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQL 273

Query: 66  AGQNHIGYG---QETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDP 111
             Q   G G   + +     TP      PPA          +     D 
Sbjct: 274 RAQEEFGQGEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDD 322

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325

 Score = 46.0 bits (108), Expect = 1e-05
 Identities = 29/225 (12%), Positives = 52/225 (23%), Gaps = 40/225 (17%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQT 145
             P   P            V   W P        + VL   KF      +       +Q 
Sbjct: 92  DVPPEEPQLSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQE 151

Query: 146 KAVFS-----NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP--LGVKALATS 198
              FS        +   Y   +   +  G      +            P  + V A+A +
Sbjct: 152 SQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARN 211

Query: 199 DQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTA 256
            + + V W+   +       L +++ Y     E    ++                     
Sbjct: 212 PRWLSVTWQDPHSWNSSFYRLRFELRYR---AERSKTFTT-------------------- 248

Query: 257 VEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
                        L     +        + V + A+   G G  S
Sbjct: 249 --------WMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS 285

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 64.5 bits (157), Expect = 6e-13
 Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 3/103 (2%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPL--RTHRNGQIVLYNVKFHKKIDANN-VI 138
                 P  PP  +     T D V ++W      +  +  ++ LY V++     A+    
Sbjct: 12  VPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYK 71

Query: 139 HRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
             +TT      + L+    Y   V          WS      T
Sbjct: 72  SEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATT 114

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 51.4 bits (123), Expect = 2e-08
 Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 6/89 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTL-----KENLVNSKNMSFLITNLERGVEYEF 63
            + + W+  +    +       Y VR  T      K    ++ ++S+  T L+    YEF
Sbjct: 34  AVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTTSLSYTATGLKPNTMYEF 93

Query: 64  RIAGQNHIGYGQE-TVRYYTTPEGPPTGP 91
            +    +          + TT E      
Sbjct: 94  SVMVTKNRRSSTWSMTAHATTYEASGPSS 122

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 20/129 (15%), Positives = 33/129 (25%), Gaps = 28/129 (21%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P+GV+A+A +  +V V W      + +       YT+         ++     T     
Sbjct: 21  PPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTT---- 76

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                  + S   T L+  T Y  +V           S      
Sbjct: 77  -----------------------SLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHAT 113

Query: 308 VKPEDVPLS 316
              E    S
Sbjct: 114 T-YEASGPS 121

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           +  L W QP  +     GY ++           +   K     +  L     Y  R+   
Sbjct: 26  SATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAF 85

Query: 69  NHIGYGQ--ETVRYYTTPEGPPT 89
           N  G     +T+   T+    P+
Sbjct: 86  NKTGVSPYSKTLVLQTSEGSGPS 108

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 62.1 bits (151), Expect = 3e-12
 Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 2/103 (1%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
            +    P  P   +       +   ++W  P  +        Y ++              
Sbjct: 4   GSSGPVPATPILQLEECCTHNNSATLSWKQPPLS--TVPADGYILELDDGNGGQFREVYV 61

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
             +T      L     Y+A V+A  K G  P+S  L L T+  
Sbjct: 62  GKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEG 104

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 18/128 (14%), Positives = 33/128 (25%), Gaps = 32/128 (25%)

Query: 189 PLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA 248
            L ++   T + S  + WK  P       GY +           E               
Sbjct: 14  ILQLEECCTHNNSATLSWKQPPLSTVPADGYIL-----------ELDDG----------- 51

Query: 249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV 308
                     +  ++ +  V       +  L   + Y   V A    G+   S  + ++ 
Sbjct: 52  ----------NGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQT 101

Query: 309 KPEDVPLS 316
                P S
Sbjct: 102 SEGSGPSS 109

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} Length = 201

 Score = 65.5 bits (159), Expect = 1e-12
 Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 15/183 (8%)

Query: 12  LVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHI 71
           L W  P    G++  +  +Y       ++  + +       ++L +  ++  R+  +   
Sbjct: 19  LQWESPAFAKGQL-TFTAQYL-SYRIFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFAD 76

Query: 72  GYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL-------- 123
            +       ++  +    GPP          D + + +  P   +      +        
Sbjct: 77  EHSDWVQITFSPVDDTIIGPPGM--QVEVLADCLHMRFLAPKIENEYETWTMKNVYNSWT 134

Query: 124 YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA--GPGPWSPKLSLMT 181
           YNV++ K+   +            V  NLE    Y  +V+         G WS  +   T
Sbjct: 135 YNVQYWKQ-GTDEKFQITPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQT 193

Query: 182 ARD 184
             D
Sbjct: 194 THD 196

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} Length = 201

 Score = 60.5 bits (146), Expect = 7e-11
 Identities = 36/227 (15%), Positives = 69/227 (30%), Gaps = 33/227 (14%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
           PP N+  +      +   W+ P         + +  ++             TT T+  FS
Sbjct: 4   PPENVRMNSVNFKNIL-QWESPAFAKGQ---LTFTAQY-LSYRIFQDKCMQTTLTECDFS 58

Query: 151 NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVP 210
           +L +  +++  V+A        W  +++     D +  P G++    +D     +  P  
Sbjct: 59  SLSKYGDHTLRVRAEFADEHSDWV-QITFSPVDDTIIGPPGMQVEVLADCLHMRFLAPKI 117

Query: 211 AGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPL 270
               +    +  Y                            Y +   +   +   +  P 
Sbjct: 118 ENEYETWTMKNVYN------------------------SWTYNVQYWKQGTDEKFQITPQ 153

Query: 271 TESAELTSLEKFTEYAVAVAART--VNGLGRLSGKVTVKVKP-EDVP 314
            +   L +LE +T Y V V       N  G  S  V  +    E VP
Sbjct: 154 YDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHDETVP 200

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT--LKENLVNSKNMSFLITNLERGVEYEFRIA 66
           ++ + W +P      + GY V+Y +       + N+ N    S ++ +L     Y FR+ 
Sbjct: 33  SLRVSWQEPRCE-RPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYVFRVR 91

Query: 67  GQNHIGYGQET---VRYYTTPEGPPTG 90
            Q+  G+G+E    +   +   GP +G
Sbjct: 92  AQSQEGWGREREGVITIESQVSGPSSG 118

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 62.0 bits (151), Expect = 4e-12
 Identities = 26/148 (17%), Positives = 39/148 (26%), Gaps = 31/148 (20%)

Query: 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAV 228
           G    S          +   P  +   A    S+ V W+  P     + GY + Y    +
Sbjct: 1   GSSGSSGSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQE-PRCERPLQGYSVEYQ---L 56

Query: 229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVA 288
            +  E  + +IP                            P   S  +  L     Y   
Sbjct: 57  LNGGELHRLNIP---------------------------NPAQTSVVVEDLLPNHSYVFR 89

Query: 289 VAARTVNGLGRLSGKVTVKVKPEDVPLS 316
           V A++  G GR    V         P S
Sbjct: 90  VRAQSQEGWGREREGVITIESQVSGPSS 117

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 61.3 bits (149), Expect = 6e-12
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 8/109 (7%)

Query: 83  TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHR 140
              G P   P  +      P  + ++W  P        +  Y+V++          +   
Sbjct: 13  LTAGVP-DTPTRLVFSALGPTSLRVSWQEP---RCERPLQGYSVEYQLLNGGELHRLNIP 68

Query: 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
           N  QT  V  +L     Y   V+A ++ G G       ++T    V  P
Sbjct: 69  NPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGRERE--GVITIESQVSGP 115

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 62.8 bits (153), Expect = 2e-12
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY-GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
           ++ L W  P+    +I  + +++   + +             F IT L   +  +FR++ 
Sbjct: 33  SLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSA 92

Query: 68  QNHIGYGQ--ETVRYYTTPEGPPT 89
           +N  G     E V YYT+    P+
Sbjct: 93  RNDYGTSGFSEEVLYYTSGCSGPS 116

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 15/110 (13%), Positives = 36/110 (32%), Gaps = 4/110 (3%)

Query: 74  GQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID 133
           G      +TT    P   P       +T + + + W  P  +    +I  + +++ +   
Sbjct: 4   GSSGAEIFTTLSCEP-DIPNPPRIANRTKNSLTLQWKAP--SDNGSKIQNFVLEWDEGKG 60

Query: 134 AN-NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
                     +Q +   + L   +     + A    G   +S ++   T+
Sbjct: 61  NGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 110

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 22/148 (14%), Positives = 37/148 (25%), Gaps = 31/148 (20%)

Query: 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAV 228
           G    S      T       P   +    +  S+ + WK       KI  + +       
Sbjct: 1   GSSGSSGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVL------- 53

Query: 229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVA 288
               EW +                         E+ Q  +   +  ++T L         
Sbjct: 54  ----EWDEGK--------------------GNGEFCQCYMGSQKQFKITKLSPAMGCKFR 89

Query: 289 VAARTVNGLGRLSGKVTVKVKPEDVPLS 316
           ++AR   G    S +V         P S
Sbjct: 90  LSARNDYGTSGFSEEVLYYTSGCSGPSS 117

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 61.3 bits (149), Expect = 8e-12
 Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 8/96 (8%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKY-----GVREHTLKENLVNSKNMSFLITNLERGVEYE 62
           T ++ + +P  T G  IL Y+ ++      V      +    S      I  L+    Y 
Sbjct: 22  TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYA 81

Query: 63  FRIAGQNHIGYGQ--ETVRYYTTPEGPPTGPPANIS 96
            R+A  N  G G+      + T P   P+ P    S
Sbjct: 82  VRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGS 117

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 59.0 bits (143), Expect = 5e-11
 Identities = 13/105 (12%), Positives = 27/105 (25%), Gaps = 8/105 (7%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK-----IDANN 136
           ++    P   P+             + +D P        I+ Y  ++             
Sbjct: 2   SSGSSGP-SSPSIDQVEP-YSSTAQVQFDEP-EATGGVPILKYKAEWRAVGEEVWHSKWY 58

Query: 137 VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
                + +       L+    Y+  + A+   G G  S      T
Sbjct: 59  DAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 103

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 47.5 bits (113), Expect = 4e-07
 Identities = 25/127 (19%), Positives = 39/127 (30%), Gaps = 27/127 (21%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
           +P   +    S  +   + +P   G   IL Y+  +        + W  K     E+S  
Sbjct: 10  SPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAV---GEEVWHSKWYDAKEASM- 65

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                       +  L+  T YAV +AA    GLG +S     K
Sbjct: 66  -----------------------EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 102

Query: 308 VKPEDVP 314
            +P   P
Sbjct: 103 TQPVREP 109

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens} Length = 211

 Score = 63.3 bits (153), Expect = 1e-11
 Identities = 26/180 (14%), Positives = 47/180 (26%), Gaps = 16/180 (8%)

Query: 12  LVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITN--LERGVEYEFRIA 66
           L W       G    Y V+Y   G R+   KE+   ++ +S  +T+   +    Y  R+ 
Sbjct: 25  LQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVR 84

Query: 67  GQNHIGYG-----QETVRYYTTPEGPP----TGPPANISHHFQTPDVVCITWDPPLRTHR 117
             +   Y           ++ T   PP    T    ++      P++          +  
Sbjct: 85  AASAGSYSEWSMTPRFTPWWETKIDPPVMNITQVNGSLLVILHAPNLPYRYQKEKNVSIE 144

Query: 118 NGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA--GPGPWSP 175
           +   +LY V                         L     Y    +            S 
Sbjct: 145 DYYELLYRVFIINNSLEKEQKVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSE 204

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens} Length = 211

 Score = 48.2 bits (114), Expect = 1e-06
 Identities = 27/217 (12%), Positives = 58/217 (26%), Gaps = 31/217 (14%)

Query: 83  TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV---KFHKKIDANNVIH 139
           T     +  P  +    +    + + W P       G   +Y V    + ++   N    
Sbjct: 2   TQSTHESLKPQRVQFQSRNFHNI-LQWQPG--RALTGNSSVYFVQYKIYGQRQWKNKEDC 58

Query: 140 RNTTQTKAVFSN--LEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALAT 197
             T +     ++   +    Y   V+A +      WS         +    P  +     
Sbjct: 59  WGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDPPVMNITQV 118

Query: 198 SDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAV 257
           +   + +   P    R +                 +    SI      +   + Y +  +
Sbjct: 119 NGSLLVILHAPNLPYRYQ-----------------KEKNVSIE-----DYYELLYRVFII 156

Query: 258 EDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAART 293
            +  E  QK       + E+ +L   + Y V      
Sbjct: 157 NNSLEKEQKVYEGAHRAVEIEALTPHSSYCVVAEIYQ 193

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 60.1 bits (146), Expect = 1e-11
 Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 7/92 (7%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           T  + W  P+     + G+ + YG+           +      + I NL+   EYE  + 
Sbjct: 18  TALITWMPPS---QPVDGFELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLI 74

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHH 98
            +            +TT             HH
Sbjct: 75  SRRGDMSSNPAKETFTTGLAAALEHH--HHHH 104

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 43.5 bits (103), Expect = 8e-06
 Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 37/134 (27%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
           AP  ++    +D +  + W P       + G+++ Y +  V       + +I LTE  N 
Sbjct: 5   APSQIEVKDVTDTTALITWMP---PSQPVDGFELTYGIKDVPG----DRTTIDLTEDEN- 56

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR-LSGKVTV 306
                                       + +L+  TEY V++ +R  +          T 
Sbjct: 57  -------------------------QYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTT 91

Query: 307 KVKPEDVPLSLRAH 320
            +      L    H
Sbjct: 92  GL---AAALEHHHH 102

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 8/101 (7%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN--VIHRNTTQTKAV 148
            P+ I     T     ITW PP     +  +  + + +  K    +   I     + +  
Sbjct: 5   APSQIEVKDVTDTTALITWMPP-----SQPVDGFELTYGIKDVPGDRTTIDLTEDENQYS 59

Query: 149 FSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
             NL+   EY   + +         + K +  T        
Sbjct: 60  IGNLKPDTEYEVSLISRRGDMSSNPA-KETFTTGLAAALEH 99

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210

 Score = 62.8 bits (152), Expect = 1e-11
 Identities = 34/188 (18%), Positives = 52/188 (27%), Gaps = 11/188 (5%)

Query: 9   TIELVWSQPTQTYGE---ILGYRVKYGVREHTLKENLVNSKNM-SFLITNLERGVEYEFR 64
           T    W   T         L Y  +     H   + +    N   F          Y   
Sbjct: 19  TFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMM 78

Query: 65  IAGQNHIGYGQETVRYYTTPE----GPPTGPPANISHHFQTPDVVCITWDPP--LRTHRN 118
           +   N +G       Y          PP      +         + I W PP  +     
Sbjct: 79  VNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTG 138

Query: 119 GQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGP-GPWSPKL 177
              +LY ++   +  A   IH    QT+    +L  G +Y  +V+     G    WSP  
Sbjct: 139 WFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPAT 198

Query: 178 SLMTARDM 185
            +    D 
Sbjct: 199 FIQIPSDF 206

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210

 Score = 54.7 bits (131), Expect = 7e-09
 Identities = 32/236 (13%), Positives = 55/236 (23%), Gaps = 37/236 (15%)

Query: 87  PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTK 146
           PP G P          +     W P           L   +  + +      +       
Sbjct: 3   PP-GKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITGGPNS 61

Query: 147 AVFSNLEEGIEYSAE--VQAITKAGPGPWSPKLSLMTARDMVRAP----LGVKALATSDQ 200
             F      +  +    V A  + G          +T       P    + VK       
Sbjct: 62  CHFGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKP 121

Query: 201 SVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL 260
            + + W P      K   + + Y                          I       E  
Sbjct: 122 YLWIKWSPPTLIDLKTGWFTLLY-------------------------EIRLK---PEKA 153

Query: 261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL-GRLSGKVTVKVKPEDVPL 315
            EW           ++ SL    +Y V V  +  +G     S    +++ P D  +
Sbjct: 154 AEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQI-PSDFTM 208

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 6/92 (6%)

Query: 4   EEPEVTIELVWSQPT----QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGV 59
           E+ +  + + WS PT    +T    L Y ++    +    E     +   F I +L  G 
Sbjct: 117 EDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQ 176

Query: 60  EYEFRIAGQNHIGYGQE--TVRYYTTPEGPPT 89
           +Y  ++  +   GY        +   P     
Sbjct: 177 KYLVQVRCKPDHGYWSAWSPATFIQIPSDFTM 208

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A Length = 215

 Score = 62.5 bits (151), Expect = 2e-11
 Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 14/146 (9%)

Query: 49  SFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHF------QTP 102
           S    NL         +  +N +G  +         +     PP   +           P
Sbjct: 69  SIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQP 128

Query: 103 DVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN---VIHRNTTQTKAVFSNLEEGIEYS 159
             + ++W P   +          +++  ++   N   V H  +++ +     L +   Y+
Sbjct: 129 GCLWLSWKPWKPS--EYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYT 186

Query: 160 AEVQAITKAGPG---PWSPKLSLMTA 182
            +++ I  + PG   PWSP L L   
Sbjct: 187 LQMRCIRSSLPGFWSPWSPGLQLRPT 212

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A Length = 215

 Score = 51.7 bits (123), Expect = 7e-08
 Identities = 35/230 (15%), Positives = 57/230 (24%), Gaps = 44/230 (19%)

Query: 86  GPPTGPPANIS--HHFQTPDVVCITWDPPLRTHRNGQIVLY------NVKFHKKIDANNV 137
           G P   P+N+S   H  T  +VC  W+P   TH     +L       + ++      + V
Sbjct: 2   GYPPASPSNLSCLMHLTTNSLVC-QWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCV 60

Query: 138 IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALAT 197
             +          NL      +  VQA    G                +  P+       
Sbjct: 61  AKKRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESPKLCLDPMDVVKLEPPMLQALDIG 120

Query: 198 SD------QSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIF 251
            D        + + WKP           ++ Y                 L  S +     
Sbjct: 121 PDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKG---ANWTLVFHLPSSKD----- 172

Query: 252 YTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
                                  EL  L +   Y + +     +  G  S
Sbjct: 173 ---------------------QFELCGLHQAPVYTLQMRCIRSSLPGFWS 201

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 59.3 bits (144), Expect = 3e-11
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 6/89 (6%)

Query: 9   TIELVWSQPTQTYG-EILGYRV-KYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
            + L WS+P+ T   E + Y +           +   + +++++ + NL R  +Y+F++ 
Sbjct: 23  WLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVI 82

Query: 67  GQNHIGYGQ--ETVRYYTTPEGPPTGPPA 93
             N  G     E V + T P+  P     
Sbjct: 83  AYNSEGKSNPSEVVEFTTCPDSGP--SSG 109

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 5/110 (4%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN--VIH 139
           ++    P   PA+          + + W  P  T  + + + Y +   ++  +       
Sbjct: 2   SSGSSGP-SMPASPVLTKAGITWLSLQWSKPSGTP-SDEGISYIL-EMEEETSGYGFKPK 58

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
            +         NL    +Y  +V A    G    S  +   T  D   + 
Sbjct: 59  YDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGPSS 108

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 121

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
            I L W++P      ++ Y ++        T+    V+ K  S  +  L     Y+FR+ 
Sbjct: 35  AINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLC 94

Query: 67  GQNHIGYGQ--ETVRYYTTPEGPPT 89
             N +G GQ  +     + PE  P+
Sbjct: 95  AVNDVGKGQFSKDTERVSLPESGPS 119

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 121

 Score = 44.3 bits (105), Expect = 5e-06
 Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 6/101 (5%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT--T 143
             P  P A +S        + +TW  P     N  ++ Y ++  +      V+  +    
Sbjct: 19  HAPEHPVATLST--VERRAINLTWTKP--FDGNSPLIRYILEMSENNAPWTVLLASVDPK 74

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
            T      L     Y   + A+   G G +S     ++  +
Sbjct: 75  ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 115

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 127

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 7/94 (7%)

Query: 9   TIELVWSQPTQTYGEILGYRV----KYGVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
           +++L W+        I  + +              +  V S   +    NL   V Y FR
Sbjct: 32  SVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV-SGTQTTAQLNLSPYVNYSFR 90

Query: 65  IAGQNHIGYGQ--ETVRYYTTPEGPPTGPPANIS 96
           +   N IG     E    Y T    P   P +  
Sbjct: 91  VMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGP 124

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 127

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 10/98 (10%)

Query: 83  TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ-----IVLYNVKFHKKIDANNV 137
                P  PP ++    Q    V ++W P      N       I+ Y    HK    ++ 
Sbjct: 12  PVYDVP-NPPFDLELTDQLDKSVQLSWTPG---DDNNSPITKFIIEYEDAMHKPGLWHHQ 67

Query: 138 IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
              + TQT A   NL   + YS  V A+   G    S 
Sbjct: 68  TEVSGTQTTAQ-LNLSPYVNYSFRVMAVNSIGKSLPSE 104

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} Length = 206

 Score = 60.9 bits (147), Expect = 5e-11
 Identities = 21/178 (11%), Positives = 47/178 (26%), Gaps = 20/178 (11%)

Query: 14  WSQPTQTYGEILGYRVKYGVREHTLKEN-------------LVNSKNMSFLITNLERGVE 60
           WS  T         +++Y        +              L +      +   +     
Sbjct: 22  WSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLLSG 81

Query: 61  YEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQT-PDVVCITWDPPLRTHRNG 119
           Y   I   + +G                  PP+++         ++ I+W+ P+    N 
Sbjct: 82  YTMWIRINHSLGSLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPENNL 141

Query: 120 QIVLYNVKFHKKIDANN---VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
           Q   + +++               +           +    Y+ +V+     G G WS
Sbjct: 142 Q---FQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWS 196

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} Length = 206

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 35/227 (15%), Positives = 65/227 (28%), Gaps = 49/227 (21%)

Query: 91  PPANIS--HHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI-----------DANNV 137
              NIS         + C  W            +                     +  + 
Sbjct: 3   VNINISCETDGYLTKMTC-RWSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDC 61

Query: 138 IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVR--APLGVKAL 195
             ++    + +F  +     Y+  ++     G    SP   +     +V+   P  VKA 
Sbjct: 62  YLQSDGFYECIFQPIFLLSGYTMWIRINHSLGSL-DSPPTCV-LPDSVVKPLPPSSVKAE 119

Query: 196 ATSDQS-VEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTM 254
            T +   +++ W+  P      L +QI Y ++  E   +W    +   +S          
Sbjct: 120 ITINIGLLKISWEK-PVFPENNLQFQIRYGLSGKEV--QWKMYEVYDAKSK--------- 167

Query: 255 TAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
                             S  L   +    YAV V  + ++GLG  S
Sbjct: 168 ------------------SVSLPVPDLCAVYAVQVRCKRLDGLGYWS 196

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 110

 Score = 58.1 bits (141), Expect = 6e-11
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 5/103 (4%)

Query: 82  TTPEGPPTGPPANIS-HHFQTPDVVCITWDPPLRTHRNGQIVL-YNVKFHKKIDANNVIH 139
           +   GPP GP              + + W PPL     G  +  Y+V+            
Sbjct: 3   SGSSGPP-GPCLPPRLQGRPKAKEIQLRWGPPLVD--GGSPISCYSVEMSPIEKDEPREV 59

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
              ++ +   S+L  G  YS  ++A  K G GP+S K  + TA
Sbjct: 60  YQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTA 102

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 110

 Score = 55.8 bits (135), Expect = 5e-10
 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
            I+L W  P    G  I  Y V+    E      +     +   +++L  G  Y FR+  
Sbjct: 25  EIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRA 84

Query: 68  QNHIGYGQ--ETVRYYTTPEGPPT 89
            N +G+G   E     T P   P+
Sbjct: 85  ANKMGFGPFSEKCDITTAPGSGPS 108

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 4/98 (4%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT--TQT 145
            +  P  +     TP  + I+WD          +  Y + + +    + V         +
Sbjct: 7   VSSVPTKLEVVDATPTSLKISWDAY--YSSWQNVKYYRITYGETGGDSPVQEFTVPGYYS 64

Query: 146 KAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
            A  S L+ G++Y+  V A     PG        +  R
Sbjct: 65  TATISGLKPGVDYTITVYAYDTFFPGYEPNSPISINYR 102

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 56.3 bits (136), Expect = 2e-10
 Identities = 15/123 (12%), Positives = 39/123 (31%), Gaps = 31/123 (25%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  ++ +  +  S+++ W    +    +  Y+I Y  T  +      + ++P   S   
Sbjct: 10  VPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGD--SPVQEFTVPGYYS--- 64

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK-VTV 306
                                    +A ++ L+   +Y + V A      G      +++
Sbjct: 65  -------------------------TATISGLKPGVDYTITVYAYDTFFPGYEPNSPISI 99

Query: 307 KVK 309
             +
Sbjct: 100 NYR 102

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          ++++ W     ++  +  YR+ YG    +  ++E  V     +  I+ L+ GV+Y   + 
Sbjct: 23 SLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVY 82

Query: 67 GQNHIGYG 74
            +    G
Sbjct: 83 AYDTFFPG 90

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 7/98 (7%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--IHRNTTQT 145
            +  P  +     TP  + I+WD       +  +  Y + + +    + V       + +
Sbjct: 4   VSSVPTKLEVVAATPTSLLISWDAS-----SSSVSYYRITYGETGGNSPVQEFTVPGSSS 58

Query: 146 KAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
            A  S L  G++Y+  V A        +S   S +  R
Sbjct: 59  TATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYR 96

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 16/123 (13%), Positives = 35/123 (28%), Gaps = 34/123 (27%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  ++ +A +  S+ + W         +  Y+I Y  T          +   +  SS+ 
Sbjct: 7   VPTKLEVVAATPTSLLISWDASS---SSVSYYRITYGETG----GNSPVQEFTVPGSSS- 58

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK-VTV 306
                                    +A ++ L    +Y + V A         S    ++
Sbjct: 59  -------------------------TATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSI 93

Query: 307 KVK 309
             +
Sbjct: 94  NYR 96

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 46.6 bits (111), Expect = 5e-07
 Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 5/71 (7%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          ++ + W   +     +  YR+ YG       ++E  V   + +  I+ L  GV+Y   + 
Sbjct: 20 SLLISWDASS---SSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVY 76

Query: 67 GQNHIGYGQET 77
                    +
Sbjct: 77 AYYSYYDLYYS 87

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 Length = 313

 Score = 60.3 bits (145), Expect = 3e-10
 Identities = 22/184 (11%), Positives = 46/184 (25%), Gaps = 19/184 (10%)

Query: 9   TIELVWSQPTQTYGEI---LGYRVKYGVREHTLKENLVNSK-----NMSFLITNLERGVE 60
           ++   W    +T+      L      G  +      L         + S    +L     
Sbjct: 115 SLICQWEPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQN 174

Query: 61  YEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANIS------HHFQTPDVVCITWDPPLR 114
               +  +N +G            +     PP   +              + ++W+P   
Sbjct: 175 MGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP 234

Query: 115 THRNGQIVLYNVKFHKKIDA---NNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPG 171
                Q     ++   +        V        +     L     Y+ +++ I    PG
Sbjct: 235 GLHINQK--CELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPG 292

Query: 172 PWSP 175
            WS 
Sbjct: 293 HWSD 296

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 Length = 313

 Score = 51.1 bits (121), Expect = 3e-07
 Identities = 8/90 (8%), Positives = 21/90 (23%), Gaps = 9/90 (10%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
            ++L W              +++              +  + + + +  L     Y  +I
Sbjct: 224 CLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQI 283

Query: 66  AGQNHIGYGQ-----ETVRYYTTPEGPPTG 90
                   G       ++    T E     
Sbjct: 284 RCIRWPLPGHWSDWSPSL-ELRTTERAAAP 312

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 Length = 313

 Score = 48.4 bits (114), Expect = 2e-06
 Identities = 32/259 (12%), Positives = 58/259 (22%), Gaps = 46/259 (17%)

Query: 72  GYGQETVRYYTTPEGPPTGPPANISHHF-QTPDVVCITWDPPLRTHRNGQIVL-YNVKFH 129
           G   + +       G P   P N+S     T   +   W+P   TH      L       
Sbjct: 82  GNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRG 141

Query: 130 KKIDANNVIHRNTTQTKAV-----FSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
                 + I     +           +L         VQA    G               
Sbjct: 142 NCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVV 201

Query: 185 MVRAPLGVKALATSDQ------SVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKS 238
            +  P+      + +        +++ W+P   G       ++ +          W+   
Sbjct: 202 KLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQ--RGEASWALVG 259

Query: 239 IPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
               E+                              EL  L   T Y + +        G
Sbjct: 260 PLPLEAL---------------------------QYELCGLLPATAYTLQIRCIRWPLPG 292

Query: 299 RL---SGKVTVKVKPEDVP 314
                S  + ++   E   
Sbjct: 293 HWSDWSPSLELRT-TERAA 310

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 56.3 bits (136), Expect = 4e-10
 Identities = 10/81 (12%), Positives = 20/81 (24%), Gaps = 3/81 (3%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
              L W  P      +  Y ++         +       + + + +L     Y   + G 
Sbjct: 23  FAVLHWKPPQ---NPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGL 79

Query: 69  NHIGYGQETVRYYTTPEGPPT 89
                       +TT    P 
Sbjct: 80  RGPNLTSPASITFTTGLEAPR 100

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 50.5 bits (121), Expect = 4e-08
 Identities = 20/141 (14%), Positives = 33/141 (23%), Gaps = 37/141 (26%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  ++AL  ++    + WKP       +  Y I  T                       
Sbjct: 10  GPTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVT----------------------- 43

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                             ++        L  L   T Y   V    + G    S      
Sbjct: 44  ---------APGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRG--LRGPNLTSPASITF 92

Query: 308 VKPEDVPLSLRAHDVSTHSMT 328
               + P  L A +V+    +
Sbjct: 93  TTGLEAPRDLEAKEVTPSGPS 113

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 14/112 (12%), Positives = 30/112 (26%), Gaps = 9/112 (8%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
            P  +     T     + W PP        +  Y+++               +       
Sbjct: 10  GPTQLRALNLTEGFAVLHWKPP-----QNPVDTYDIQVTAPGAPPLQAETPGSAVDYPLH 64

Query: 151 NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSV 202
           +L     Y+A V+ +        +      T    + AP  ++A   +    
Sbjct: 65  DLVLHTNYTATVRGLRGPNLTSPASI----TFTTGLEAPRDLEAKEVTPSGP 112

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 55.9 bits (135), Expect = 4e-10
 Identities = 16/84 (19%), Positives = 26/84 (30%), Gaps = 3/84 (3%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           T  L W++P        GY + +       +E L+     S  +  L     Y  R+   
Sbjct: 23  TALLTWTEPP---VRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAM 79

Query: 69  NHIGYGQETVRYYTTPEGPPTGPP 92
                       +TT     +GP 
Sbjct: 80  WGQSLLPPVSTSFTTGGLRISGPS 103

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 47.1 bits (112), Expect = 4e-07
 Identities = 17/82 (20%), Positives = 25/82 (30%), Gaps = 5/82 (6%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
            P ++     TP    +TW  P       +   Y + FH        I      T     
Sbjct: 10  APRDLEAKEVTPRTALLTWTEP-----PVRPAGYLLSFHTPGGQTQEILLPGGITSHQLL 64

Query: 151 NLEEGIEYSAEVQAITKAGPGP 172
            L     Y+A +QA+      P
Sbjct: 65  GLFPSTSYNARLQAMWGQSLLP 86

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 56.0 bits (135), Expect = 5e-10
 Identities = 23/120 (19%), Positives = 35/120 (29%), Gaps = 29/120 (24%)

Query: 196 ATSDQSVEVWWKPVPAGRGKILGYQIFY-TMTAVEDLDEWSQKSIPLTESSNIARIFYTM 254
             +  +V+V W         I GY++ Y   + ++    W                    
Sbjct: 26  VLTPTTVQVTWTV-DRQPQFIQGYRVMYRQTSGLQATSSWQNLDAK-------------- 70

Query: 255 TAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP 314
                        VP   SA L +L+K   Y + V        G  S   TV+   E  P
Sbjct: 71  -------------VPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESGP 117

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 55.3 bits (133), Expect = 9e-10
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY------GVREHTLKENLVNSKNMSFLITNLERGVEYE 62
           T+++ W+   Q    I GYRV Y               +       S ++ NL++GV YE
Sbjct: 31  TVQVTWTVDRQP-QFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYE 89

Query: 63  FRIAGQNHIGYGQE-TVRYYTTPE--GPPTG 90
            ++    +   G +   +   T E  GP +G
Sbjct: 90  IKVRPYFNEFQGMDSESKTVRTTEESGPSSG 120

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 44.5 bits (105), Expect = 6e-06
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 101 TPDVVCITWDPPLRTHR-NGQIVLYNVKFHKKIDANNVIH--RNTTQTKAVFSNLEEGIE 157
           TP  V +TW    +     G  V+Y      +  ++      +  T+  AV  NL++G+ 
Sbjct: 28  TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVT 87

Query: 158 YSAEVQAITKAGPGPWSPKLSLMTARD 184
           Y  +V+       G  S   ++ T  +
Sbjct: 88  YEIKVRPYFNEFQGMDSESKTVRTTEE 114

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 55.5 bits (134), Expect = 5e-10
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKY-----GVREHTLKENLVNSKNMSFLITNLERGVEYE 62
           T ++ + +P  T G  IL Y+ ++      V      +    S      I  L+    Y 
Sbjct: 21  TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYA 80

Query: 63  FRIAGQNHIGYGQ--ETVRYYTTP 84
            R+A  N  G G+      + T P
Sbjct: 81  VRLAALNGKGLGEISAASEFKTQP 104

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 53.2 bits (128), Expect = 3e-09
 Identities = 12/101 (11%), Positives = 25/101 (24%), Gaps = 11/101 (10%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID-----ANNVIHR 140
             P+                 + +D P        I+ Y  ++    +            
Sbjct: 8   SSPSIDQVEP-----YSSTAQVQFDEP-EATGGVPILKYKAEWRAVGEEVWHSKWYDAKE 61

Query: 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
            + +       L+    Y+  + A+   G G  S      T
Sbjct: 62  ASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 102

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 44.3 bits (105), Expect = 5e-06
 Identities = 24/123 (19%), Positives = 38/123 (30%), Gaps = 27/123 (21%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
           +P   +    S  +   + +P   G   IL Y+  +        + W  K     E+S  
Sbjct: 9   SPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAV---GEEVWHSKWYDAKEASM- 64

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                       +  L+  T YAV +AA    GLG +S     K
Sbjct: 65  -----------------------EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 101

Query: 308 VKP 310
            +P
Sbjct: 102 TQP 104

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} Length = 488

 Score = 60.0 bits (144), Expect = 6e-10
 Identities = 34/242 (14%), Positives = 58/242 (23%), Gaps = 33/242 (13%)

Query: 64  RIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
             +G N I    + V       G P   P  +S        +  +W+P   T   G    
Sbjct: 262 ENSGTNIIFITDDDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNT 321

Query: 124 -YNVKF---HKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
            Y +      K    + +        +           ++  +      G    +  ++ 
Sbjct: 322 EYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVIN- 380

Query: 180 MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
           +T R     P  +K    +   V   W          L  QI           E    +I
Sbjct: 381 VTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEI--CKANSKKEVRNATI 438

Query: 240 PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR 299
              E S                         T    +  L  +T Y   V   +     +
Sbjct: 439 RGAEDS-------------------------TYHVAVDKLNPYTAYTFRVRCSS-KTFWK 472

Query: 300 LS 301
            S
Sbjct: 473 WS 474

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} Length = 488

 Score = 44.2 bits (103), Expect = 6e-05
 Identities = 9/85 (10%), Positives = 18/85 (21%), Gaps = 8/85 (9%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN-----SKNMSFLITNLERGVEYEF 63
            +   W  P       L  +++        +                 +  L     Y F
Sbjct: 402 VVTFSWYLPGNFTKINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTF 461

Query: 64  RI-AGQNHIGYGQE--TVRYYTTPE 85
           R+                + + T E
Sbjct: 462 RVRCSSKTFWKWSRWSDEKRHLTTE 486

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 221

 Score = 57.9 bits (139), Expect = 7e-10
 Identities = 32/190 (16%), Positives = 56/190 (29%), Gaps = 18/190 (9%)

Query: 12  LVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMS-----FLITNLERGVEYEFRIA 66
           L W+ P    G  + Y V+Y +       N    +N++           +   +Y  R+ 
Sbjct: 26  LQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVR 85

Query: 67  GQNHIGYG--QETVRYYTTPEGPPTGPPANISHH-------FQTPDVVCITWDPPLRTHR 117
                      E+ R+Y   E     P   ++            P+      +    + +
Sbjct: 86  AIWGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLTAPEKWKRNPEDLPVSMQ 145

Query: 118 NGQIVL-YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA--GPGPWS 174
                L YNV       +N    +  T    V + LE    Y   V++           S
Sbjct: 146 QIYSNLKYNVSVLNT-KSNRTWSQCVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPS 204

Query: 175 PKLSLMTARD 184
            K    T +D
Sbjct: 205 EKQCARTLKD 214

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 221

 Score = 54.1 bits (129), Expect = 1e-08
 Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 31/228 (13%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV---IHRNTTQTKA 147
            PANI+        V + W PP      G  V Y V++        +     RN  +T  
Sbjct: 11  KPANITFLSINMKNV-LQWTPP--EGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYC 67

Query: 148 VFSN--LEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVW 205
             S    +   +Y A V+AI       W+         +    P  V  L T ++S+ V 
Sbjct: 68  DLSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYPFLETQIGPPEVA-LTTDEKSISVV 126

Query: 206 WKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ 265
                                      + + + +P++     + + Y ++ +      + 
Sbjct: 127 LTAPEK--------------------WKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTW 166

Query: 266 KSVPLTESAELTSLEKFTEYAVAVAART--VNGLGRLSGKVTVKVKPE 311
                  +  LT LE  T Y V V +         + S K   +   +
Sbjct: 167 SQCVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 55.3 bits (133), Expect = 7e-10
 Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 7/87 (8%)

Query: 9   TIELVWSQPTQTYGE-ILGYRVKYGVREHTLKEN----LVNSKNMSFLITNLERGVEYEF 63
           +IEL W    +   +      +++ + E   K +    +        ++  LE    Y+F
Sbjct: 31  SIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKF 90

Query: 64  RIAGQNHIGYGQ--ETVRYYTTPEGPP 88
           R+   +  G  +    V   TT E  P
Sbjct: 91  RLKVTSPSGEYEYSPVVSVATTRESGP 117

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 54.2 bits (130), Expect = 2e-09
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 9/115 (7%)

Query: 74  GQETVRYYTTPEGPPTGPPA-NISHHFQTPDVVCITWDPPLRTHRNG---QIVLYNVKFH 129
                 +   P   P  P    ++HH      + + WD   +  R G   Q + ++++  
Sbjct: 5   SSGMEPHKVVPLSKPHPPVVGKVTHHS-----IELYWDLEQKEKRQGPQEQWLRFSIEEE 59

Query: 130 KKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
                +  +      T+ V   LE    Y   ++  + +G   +SP +S+ T R+
Sbjct: 60  DPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 18/130 (13%), Positives = 32/130 (24%), Gaps = 29/130 (22%)

Query: 188 APLGVKALATSDQSVEV-WWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSN 246
            P        +  S+E+ W       R       + ++   +E+ D              
Sbjct: 18  KPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFS---IEEEDPKMH---------- 64

Query: 247 IARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV 306
                           +            +  LE  T Y   +   + +G    S  V+V
Sbjct: 65  ---------------SYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSV 109

Query: 307 KVKPEDVPLS 316
               E  P S
Sbjct: 110 ATTRESGPSS 119

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 Length = 111

 Score = 55.1 bits (133), Expect = 9e-10
 Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 4/110 (3%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIH 139
           +   GP    P +++    T     + W PP R    G I  Y V++  +          
Sbjct: 3   SGSSGPT-SAPQHLTVEDVTDTTTTLKWRPPDRIG-AGGIDGYLVEYCLEGSEEWVPANK 60

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
               +      +L  G      V  +  AG    +  L  +T R+   + 
Sbjct: 61  EPVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRESGPSS 110

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 Length = 111

 Score = 50.1 bits (120), Expect = 4e-08
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKYGVREHTLKE----NLVNSKNMSFLITNLERGVEYEF 63
           T  L W  P +     I GY V+Y       +E    N    +   F + +L  G    F
Sbjct: 24  TTTLKWRPPDRIGAGGIDGYLVEY--CLEGSEEWVPANKEPVERCGFTVKDLPTGARILF 81

Query: 64  RIAGQNHIGYGQ--ETVRYYTTPE-GPPTG 90
           R+ G N  G  +    ++  T  E GP +G
Sbjct: 82  RVVGVNIAGRSEPATLLQPVTIRESGPSSG 111

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 54.6 bits (131), Expect = 1e-09
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 4/85 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
            + L W  P      + GY ++   G +   + +  V       L+  L + V YEFR+ 
Sbjct: 22  GVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLV 81

Query: 67  GQNHIGYGQ--ETVRYYTTPEGPPT 89
                       T    T+    P+
Sbjct: 82  AFAGSFVSDPSNTANVSTSGLSGPS 106

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 52.2 bits (125), Expect = 8e-09
 Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT--T 143
                PP  +    +TP  V + WDPP       ++  Y ++  +      V+      T
Sbjct: 5   SSGLSPPRGLVAV-RTPRGVLLHWDPP--ELVPKRLDGYVLEGRQGSQGWEVLDPAVAGT 61

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
           +T+ +   L + + Y   + A   +     S   ++ T+
Sbjct: 62  ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTS 100

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 54.3 bits (131), Expect = 1e-09
 Identities = 15/88 (17%), Positives = 25/88 (28%), Gaps = 5/88 (5%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT-LKENLVNSKNMSFLITNLERGVEYEFRIAG 67
              + W         +   RV Y   E     +        S ++  L     Y  R+  
Sbjct: 23  AARVFWEGAP---RPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTC 79

Query: 68  QNHIGYGQETVRYYTTPEGP-PTGPPAN 94
               G         TT + P P+  P++
Sbjct: 80  LYPGGGSSTLTGRVTTKKAPSPSSGPSS 107

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 13/100 (13%), Positives = 26/100 (26%), Gaps = 14/100 (14%)

Query: 74  GQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID 133
           G       ++   PP     ++     + D   + W+          + L  V +     
Sbjct: 1   GSSG----SSGLAPPR----HLGFSDVSHDAARVFWEGA-----PRPVRLVRVTYVSSEG 47

Query: 134 AN-NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGP 172
            +          T A+   L     Y+  V  +   G   
Sbjct: 48  GHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYPGGGSS 87

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 47.4 bits (113), Expect = 4e-07
 Identities = 24/134 (17%), Positives = 35/134 (26%), Gaps = 39/134 (29%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  +     S  +  V+W+  P     +   ++ Y                        
Sbjct: 10  PPRHLGFSDVSHDAARVFWEGAP---RPVRLVRVTYV----------------------- 43

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGR-LSGKVT 305
                      +     Q   P    SA L  L   T Y V V      G    L+G+VT
Sbjct: 44  ---------SSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVT 94

Query: 306 VKVKPEDVPLSLRA 319
              K    P S  +
Sbjct: 95  --TKKAPSPSSGPS 106

>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* Length = 207

 Score = 56.6 bits (136), Expect = 1e-09
 Identities = 32/172 (18%), Positives = 57/172 (33%), Gaps = 15/172 (8%)

Query: 14  WSQPTQTYGE---ILGYRVKYGVREHT--LKENLVNSKNM-SFLITNLERGVEYEFRIAG 67
           W     T       L Y++ + + E    + EN   +  +   L+ ++     Y   +  
Sbjct: 21  WKMNGPTNCSTELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWA 80

Query: 68  QNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL-YNV 126
              + +       +   E      P N++ H    D + +TW  P          L Y V
Sbjct: 81  GQQLLWKGS----FKPSEHVKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAV 136

Query: 127 KFHKKIDANNV----IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
               + D  +     +       +   S L+ GI Y A V+A  +A    WS
Sbjct: 137 NIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYNTTWS 188

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 53.2 bits (128), Expect = 3e-09
 Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 7/86 (8%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           ++++ W+ P    G +L Y + Y         K   V        + +L+   +Y   ++
Sbjct: 23  SLQVSWTPPL---GRVLHYWLTYAPASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVS 79

Query: 67  GQNHIGYGQETVRYYTT--PEGPPTG 90
                G  +       T  P GP +G
Sbjct: 80  AIYAAGRSEAVSATGQTACPSGPSSG 105

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 53.2 bits (128), Expect = 3e-09
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 8/93 (8%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
           ++       PP+N++   +TPD + ++W PP      G+++ Y + +            +
Sbjct: 2   SSGSSGR-SPPSNLALASETPDSLQVSWTPP-----LGRVLHYWLTYAPASGLGPEKSVS 55

Query: 142 T--TQTKAVFSNLEEGIEYSAEVQAITKAGPGP 172
               ++     +L+   +Y   V AI  AG   
Sbjct: 56  VPGARSHVTLPDLQAATKYRVLVSAIYAAGRSE 88

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 44.0 bits (104), Expect = 5e-06
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 34/127 (26%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  +   + +  S++V W P     G++L Y + Y   +        +KS+ +  + + 
Sbjct: 10  PPSNLALASETPDSLQVSWTPPL---GRVLHYWLTYAPAS----GLGPEKSVSVPGARS- 61

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                       L  L+  T+Y V V+A    G        T +
Sbjct: 62  -------------------------HVTLPDLQAATKYRVLVSAIYAAGRSEAV-SATGQ 95

Query: 308 VKPEDVP 314
                 P
Sbjct: 96  TACPSGP 102

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 5/84 (5%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY-GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
           ++ L W         +  Y ++Y         + +       + I  L    EY FR+  
Sbjct: 23  SVTLTWDSGNS--EPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLA 80

Query: 68  QNHIGYGQ--ETVRYYTTPEGPPT 89
            N IG G   E VR  T  +  P+
Sbjct: 81  VNSIGRGPPSEAVRARTGEQSGPS 104

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 6/102 (5%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-IHR 140
           ++    P  PP ++     T   V +TWD       +  +  Y +++             
Sbjct: 2   SSGSSGP-KPPIDLVVTETTATSVTLTWDSG----NSEPVTYYGIQYRAAGTEGPFQEVD 56

Query: 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
               T+     L    EY+  V A+   G GP S  +   T 
Sbjct: 57  GVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTG 98

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 22/127 (17%), Positives = 33/127 (25%), Gaps = 33/127 (25%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P+ +    T+  SV + W         +  Y I Y     E                  
Sbjct: 10  PPIDLVVTETTATSVTLTWDS--GNSEPVTYYGIQYRAAGTEG----------------- 50

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                          + +     T    +  L  F+EYA  V A    G G  S  V  +
Sbjct: 51  --------------PFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRAR 96

Query: 308 VKPEDVP 314
              +  P
Sbjct: 97  TGEQSGP 103

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 52.8 bits (127), Expect = 4e-09
 Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 10/92 (10%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
           T  + W  P      I G  V +G +     E  V+  S   S  +TNLE    YE RI 
Sbjct: 17  TAVVTWQPPI---LPIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLEPNTTYEIRIV 73

Query: 67  GQNHIGYGQETVRYYTTPEGPPTGPPANISHH 98
            +N   Y       +TT          +  HH
Sbjct: 74  ARNGQQYSPPVSTTFTT-----GSLEHHHHHH 100

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 43.9 bits (104), Expect = 6e-06
 Identities = 21/86 (24%), Positives = 29/86 (33%), Gaps = 7/86 (8%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRNTTQTKAV 148
           PP NI     T     +TW PP        I    V F +K D +    +   ++ T   
Sbjct: 4   PPFNIKVTNITLTTAVVTWQPP-----ILPIEGILVTFGRKNDPSDETTVDLTSSITSLT 58

Query: 149 FSNLEEGIEYSAEVQAITKAGPGPWS 174
            +NLE    Y   + A       P  
Sbjct: 59  LTNLEPNTTYEIRIVARNGQQYSPPV 84

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 43.5 bits (103), Expect = 8e-06
 Identities = 21/122 (17%), Positives = 34/122 (27%), Gaps = 34/122 (27%)

Query: 185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTES 244
           M++ P  +K    +  +  V W+P       I G  + +                     
Sbjct: 1   MLQPPFNIKVTNITLTTAVVTWQPPIL---PIEGILVTFGRKNDPS-------------- 43

Query: 245 SNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR-LSGK 303
                           DE +        S  LT+LE  T Y + + AR        +S  
Sbjct: 44  ----------------DETTVDLTSSITSLTLTNLEPNTTYEIRIVARNGQQYSPPVSTT 87

Query: 304 VT 305
            T
Sbjct: 88  FT 89

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 56.7 bits (137), Expect = 4e-09
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKYGVREHTLKE--NLVNSKNMSFLITNLERGVEYEFRI 65
           ++ L W++P    G +I  Y V+      T +    +  ++   + + NL     Y+FR+
Sbjct: 214 SVNLTWTEPASDGGSKITNYIVEK--CATTAERWLRVGQARETRYTVINLFGKTSYQFRV 271

Query: 66  AGQNHIGYGQ--ETVRYYTTPEGPPTGPPAN 94
             +N  G  +  E      T E        +
Sbjct: 272 IAENKFGLSKPSEPSEPTITKEDKTRAMNYD 302

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} Length = 305

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 24/143 (16%), Positives = 41/143 (28%), Gaps = 4/143 (2%)

Query: 50  FLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITW 109
                +ER     + +  +N   +G +           P  PP  +     + D V +TW
Sbjct: 163 VFPNGVERKDAGFYVVCAKN--RFGIDQKTVELDVADVP-DPPRGVKVSDVSRDSVNLTW 219

Query: 110 DPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAG 169
             P       +I  Y V+         +      +T+    NL     Y   V A  K G
Sbjct: 220 TEPASDG-GSKITNYIVEKCATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFG 278

Query: 170 PGPWSPKLSLMTARDMVRAPLGV 192
               S        ++     +  
Sbjct: 279 LSKPSEPSEPTITKEDKTRAMNY 301

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 Length = 247

 Score = 54.8 bits (131), Expect = 9e-09
 Identities = 29/239 (12%), Positives = 57/239 (23%), Gaps = 37/239 (15%)

Query: 63  FRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIV 122
               G              T      T P   +       + +  TW            +
Sbjct: 11  LTPNGNEDTTADFFLTTMPTDSLSVSTLPLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTL 70

Query: 123 LYNVKF---HKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL 179
            Y  K     K    ++ +      +       E  +  +  VQ      P   + ++  
Sbjct: 71  HYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQDPREPRRQATQMLK 130

Query: 180 MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI 239
           +    +  AP  +     S+  +E+ W          L + + Y                
Sbjct: 131 LQNLVIPWAPENLTLHKLSESQLELNWNNRF--LNHCLEHLVQYR--------------- 173

Query: 240 PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298
                             +    W+++SV       L S++    Y   V +R     G
Sbjct: 174 -----------------TDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCG 215

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 Length = 247

 Score = 52.9 bits (126), Expect = 4e-08
 Identities = 18/174 (10%), Positives = 49/174 (28%), Gaps = 12/174 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKE-----NLVNSKNMSFLITNLERGVEYEF 63
            +   W   ++     L     Y   ++   +                +   E  +   F
Sbjct: 52  YMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTF 111

Query: 64  RIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
            +  Q+     ++  +            P N++ H  +   + + W+     H     + 
Sbjct: 112 VVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFLNH----CLE 167

Query: 124 YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK---AGPGPWS 174
           + V++    D +        + K    +++    Y+  V++           WS
Sbjct: 168 HLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWS 221

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 51.3 bits (123), Expect = 1e-08
 Identities = 17/122 (13%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  ++ +A +  S+ + W   P     +  Y+I Y  T          +   +  SS+ 
Sbjct: 7   VPTKLEVVAATPTSLLISWDA-PMSSSSVYYYRITYGETG----GNSPVQEFTVPYSSS- 60

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                    +A ++ L    +Y + V A   +  G +     + 
Sbjct: 61  -------------------------TATISGLSPGVDYTITVYAWGEDSAGYMFMYSPIS 95

Query: 308 VK 309
           + 
Sbjct: 96  IN 97

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 5/90 (5%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--IHRNTTQT 145
            +  P  +     TP  + I+WD P+    +  +  Y + + +    + V       + +
Sbjct: 4   VSSVPTKLEVVAATPTSLLISWDAPMS---SSSVYYYRITYGETGGNSPVQEFTVPYSSS 60

Query: 146 KAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
            A  S L  G++Y+  V A  +   G    
Sbjct: 61  TATISGLSPGVDYTITVYAWGEDSAGYMFM 90

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 47.5 bits (113), Expect = 3e-07
 Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          ++ + W  P  +   +  YR+ YG       ++E  V   + +  I+ L  GV+Y   + 
Sbjct: 20 SLLISWDAPMSS-SSVYYYRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVY 78

Query: 67 GQNHIGYGQET 77
                 G   
Sbjct: 79 AWGEDSAGYMF 89

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A Length = 227

 Score = 54.3 bits (130), Expect = 1e-08
 Identities = 33/194 (17%), Positives = 53/194 (27%), Gaps = 21/194 (10%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY-----GVREHTLKENLVNSKNM----SFLITNLERGV 59
            +   W +          Y   Y       +   L +       +    S    +    V
Sbjct: 36  DLVCFWEEAASAGVGPGQYSFSYQLEDEPWKLCRLHQAPTARGAVRFWCSLPTADTSSFV 95

Query: 60  EYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQ-TPDVVCITWDPPLRTHRN 118
             E R+   +        +             P  +          V + W PP  T   
Sbjct: 96  PLELRVTAASGAPRYHRVIHINEVV---LLDAPVGLVARLADESGHVVLRWLPPPETPMT 152

Query: 119 GQIVLYNVKFHKKIDANNV--IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGP-----G 171
             I  Y V       A +V  +     +T+ V SNL     Y+  V+A            
Sbjct: 153 SHI-RYEVDVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWS 211

Query: 172 PWSPKLSLMTARDM 185
            WS  +SL+T  D+
Sbjct: 212 EWSEPVSLLTPSDL 225

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKY-----GVREHTLKENLVNSKNMSFLITNLERGVEYE 62
           T ++ + +P  T G  IL Y+ ++      V      +    S      I  L+    Y 
Sbjct: 128 TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYA 187

Query: 63  FRIAGQNHIGYGQ--ETVRYYTTP 84
            R+A  N  G G+      + T P
Sbjct: 188 VRLAALNGKGLGEISAASEFKTQP 211

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 19/145 (13%), Positives = 36/145 (24%), Gaps = 13/145 (8%)

Query: 44  NSKNMSFL-ITNLERGVEYEFRIAGQNHIGYGQETVR-YYTTPEGPPTGPPANISHHFQT 101
           N+ + S+L +T         +     N IG                P+            
Sbjct: 71  NTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDQVEPYSST-- 128

Query: 102 PDVVCITWDPPLRTHRNGQIVLYNVKFHKK-----IDANNVIHRNTTQTKAVFSNLEEGI 156
                + +D P        I+ Y  ++                  + +       L+   
Sbjct: 129 ---AQVQFDEP-EATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPET 184

Query: 157 EYSAEVQAITKAGPGPWSPKLSLMT 181
            Y+  + A+   G G  S      T
Sbjct: 185 TYAVRLAALNGKGLGEISAASEFKT 209

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 23/123 (18%), Positives = 36/123 (29%), Gaps = 27/123 (21%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
           +P   +    S  +   + +P   G   IL Y+  +        + W  K     E    
Sbjct: 116 SPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWR---AVGEEVWHSKWYDAKE---- 168

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                 +  +  L                      T YAV +AA    GLG +S     K
Sbjct: 169 -ASMEGIVTIVGLKPE-------------------TTYAVRLAALNGKGLGEISAASEFK 208

Query: 308 VKP 310
            +P
Sbjct: 209 TQP 211

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 50.9 bits (122), Expect = 2e-08
 Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 12/92 (13%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          +I + W+ P+     I GYR+ Y         KE  V   + S  IT L  GVEY   + 
Sbjct: 17 SITVSWTPPS---ATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVY 73

Query: 67 GQNHIGYGQETVRYYTTPEGPPTGPPANISHH 98
                     V   TT  G          HH
Sbjct: 74 ALKDNQESPPLVGTQTT--GGHHHH-----HH 98

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 44.3 bits (105), Expect = 4e-06
 Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 7/85 (8%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRNTTQTKA 147
             P ++     T   + ++W PP     +  I  Y + +           +    + T  
Sbjct: 3   DAPTDLQVTNVTDTSITVSWTPP-----SATITGYRITYTPSNGPGEPKELTVPPSSTSV 57

Query: 148 VFSNLEEGIEYSAEVQAITKAGPGP 172
             + L  G+EY   V A+      P
Sbjct: 58  TITGLTPGVEYVVSVYALKDNQESP 82

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 29/123 (23%), Positives = 41/123 (33%), Gaps = 36/123 (29%)

Query: 185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTES 244
           M+ AP  ++    +D S+ V W P       I GY+I YT +                  
Sbjct: 1   MLDAPTDLQVTNVTDTSITVSWTPPS---ATITGYRITYTPSNGP--------------- 42

Query: 245 SNIARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGR-LSG 302
                            E  + +VP +  S  +T L    EY V+V A   N     L G
Sbjct: 43  ----------------GEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKDNQESPPLVG 86

Query: 303 KVT 305
             T
Sbjct: 87  TQT 89

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 124

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 9/90 (10%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY-------GVREHTLKENLVNSKNMSFLITNLERGVEY 61
           ++ L +         I  + V+        G     + +        S  + +L     Y
Sbjct: 33  SVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCY 92

Query: 62  EFRIAGQNHIGYGQ--ETVRYYTTPEGPPT 89
            FR+   N +G     +  R   T +  P+
Sbjct: 93  SFRMRQVNIVGTSPPSQPSRKIQTLQSGPS 122

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 124

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 27/131 (20%)

Query: 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAV 228
           G    S  +S     ++   P  +       +SV + ++P   G+  I  + +   +  V
Sbjct: 1   GSSGSSGTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVV 60

Query: 229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVA 288
            + +EW                      +  L        P   S E+  L  FT Y+  
Sbjct: 61  GEGEEW--------------------LLIHQLSN-----EPDARSMEVPDLNPFTCYSFR 95

Query: 289 VAARTVNGLGR 299
           +    VN +G 
Sbjct: 96  MRQ--VNIVGT 104

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 9/89 (10%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKYGVREHTLKEN---LVNSKNMSFLITNLERGVEYEFR 64
           + ++ W  P    G  I  Y V+    E +       + +      L   L  G  Y  R
Sbjct: 34  SFKITWDPPKDNGGATINKYVVEM--AEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLR 91

Query: 65  IAGQNHIGYGQ--ETVRYYTTPE-GPPTG 90
           +   +  G     E++   T    GP +G
Sbjct: 92  VYCISDGGQSAVSESLLVQTPAVSGPSSG 120

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 49.4 bits (118), Expect = 9e-08
 Identities = 25/109 (22%), Positives = 36/109 (33%), Gaps = 7/109 (6%)

Query: 76  ETVRYYTTPE--GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID 133
             V + T P+  G P  P               ITWDPP        I  Y V+  +  +
Sbjct: 7   GVVEFTTCPDKPGIPVKPSVKGK---IHSHSFKITWDPPKDNG-GATINKYVVEMAEGSN 62

Query: 134 ANN-VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
            N   +  +    + +   L  G  Y   V  I+  G    S  L + T
Sbjct: 63  GNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 111

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* Length = 199

 Score = 52.4 bits (125), Expect = 4e-08
 Identities = 18/174 (10%), Positives = 49/174 (28%), Gaps = 12/174 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKE-----NLVNSKNMSFLITNLERGVEYEF 63
            +   W   ++     L     Y   ++   +                +   E  +   F
Sbjct: 14  YMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTF 73

Query: 64  RIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL 123
            +  Q+     ++  +            P N++ H  +   + + W+     H     + 
Sbjct: 74  VVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFLNH----CLE 129

Query: 124 YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK---AGPGPWS 174
           + V++    D +        + K    +++    Y+  V++           WS
Sbjct: 130 HLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWS 183

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* Length = 199

 Score = 47.4 bits (112), Expect = 2e-06
 Identities = 28/209 (13%), Positives = 54/209 (25%), Gaps = 46/209 (22%)

Query: 102 PDVVCI---------TWDPPLRTHRNGQIVLYNVKF---HKKIDANNVIHRNTTQTKAVF 149
           P+V C          TW            + Y  K     K    ++ +      +    
Sbjct: 3   PEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQL 62

Query: 150 SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPV 209
              E  +  +  VQ      P   + ++  +    +  AP  +     S+  +E+ W   
Sbjct: 63  QKKEIHLYQTFVVQLQDPREPRRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWN-- 120

Query: 210 PAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVP 269
                  L + + Y                                  +    W+++SV 
Sbjct: 121 NRFLNHCLEHLVQYR--------------------------------TDWDHSWTEQSVD 148

Query: 270 LTESAELTSLEKFTEYAVAVAARTVNGLG 298
                 L S++    Y   V +R     G
Sbjct: 149 YRHKFSLPSVDGQKRYTFRVRSRFNPLCG 177

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 50.4 bits (121), Expect = 4e-08
 Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
           T+ + W  P       + GY ++Y     E  +  N        F IT L    +   R+
Sbjct: 23  TVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRV 82

Query: 66  AGQNHIGYGQ--ETVRYYTTPE-GPPTG 90
              N  G  +     +     E GP +G
Sbjct: 83  KAVNAAGASEPKYYSQPILVKESGPSSG 110

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 15/110 (13%), Positives = 35/110 (31%), Gaps = 4/110 (3%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIH 139
           ++       PP  ++    T   V + W PP        +  Y +++  +   +      
Sbjct: 2   SSGSSGT-SPPTLLTVDSVTDTTVTMRWRPPDHIG-AAGLDGYVLEYCFEGTEDWIVANK 59

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
               +TK   + L    +    V+A+  AG          +  ++   + 
Sbjct: 60  DLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKESGPSS 109

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 48.9 bits (117), Expect = 7e-08
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 5/77 (6%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVRE--HTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          +I++ W  P    G++  YRV Y   E          + +  +  +  L  G EY   + 
Sbjct: 17 SIKIAWESPQ---GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVV 73

Query: 67 GQNHIGYGQETVRYYTT 83
            +     Q  +   +T
Sbjct: 74 ALHDDMESQPLIGTQST 90

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 7/84 (8%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN--VIHRNTTQTKAV 148
            P  ++      D + I W+ P      GQ+  Y V +    D  +      +  +  A 
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESP-----QGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAE 58

Query: 149 FSNLEEGIEYSAEVQAITKAGPGP 172
              L  G EY+  V A+       
Sbjct: 59  LQGLRPGSEYTVSVVALHDDMESQ 82

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 36/121 (29%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P G+        S+++ W+      G++  Y++ Y+                       
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYS----------------------- 37

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                  +  + + E         ++AEL  L   +EY V+V A  ++     S  +   
Sbjct: 38  -------SPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVA--LHDDME-SQPLIGT 87

Query: 308 V 308
            
Sbjct: 88  Q 88

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 5/82 (6%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          ++ L W+ P         + ++Y    +        V     S+ +T L+ G EY   I 
Sbjct: 17 SLRLSWTAPD---AAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIY 73

Query: 67 GQNHIGYGQETVRYYTTPEGPP 88
          G             +TT     
Sbjct: 74 GVKGGHRSNPLSAEFTTGGHHH 95

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 36/130 (27%)

Query: 185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTES 244
           M+ AP  +     ++ S+ + W            + I Y  +  E + E    ++P +E 
Sbjct: 1   MLPAPKNLVVSEVTEDSLRLSWTAPD---AAFDSFMIQYQES--EKVGEAINLTVPGSER 55

Query: 245 SNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV 304
           S                             +LT L+  TEY V++    V G  R S  +
Sbjct: 56  S----------------------------YDLTGLKPGTEYTVSIYG--VKGGHR-SNPL 84

Query: 305 TVKVKPEDVP 314
           + +       
Sbjct: 85  SAEFTTGGHH 94

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 11/86 (12%), Positives = 29/86 (33%), Gaps = 7/86 (8%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT--TQTKAV 148
            P N+     T D + ++W  P     +     + +++ +       I+     ++    
Sbjct: 4   APKNLVVSEVTEDSLRLSWTAP-----DAAFDSFMIQYQESEKVGEAINLTVPGSERSYD 58

Query: 149 FSNLEEGIEYSAEVQAITKAGPGPWS 174
            + L+ G EY+  +  +         
Sbjct: 59  LTGLKPGTEYTVSIYGVKGGHRSNPL 84

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 Length = 115

 Score = 48.0 bits (114), Expect = 3e-07
 Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 16/94 (17%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY--------------GVREHTLKENLVNSKNMSFLITN 54
           ++ L W  P      I+ ++V+Y               +     K N    K+ +  +T+
Sbjct: 18  SVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTD 77

Query: 55  LERGVEYEFRIAGQNHIGYGQ--ETVRYYTTPEG 86
           L+    Y FRI         +   T   +    G
Sbjct: 78  LKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPG 111

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 Length = 115

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 17/114 (14%), Positives = 32/114 (28%), Gaps = 18/114 (15%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P        SD+SV + W         I+ +++ Y M        W   +         
Sbjct: 5   PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVG--KRKNWQTTN--------- 53

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301
                    +          +  + +A +T L+    Y   + A   N   + S
Sbjct: 54  -------DNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKES 100

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 121

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY----GVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
           ++ + W         I  +RV+Y     V +  L  + +    +S  IT LE+G+ Y+FR
Sbjct: 33  SVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFR 92

Query: 65  IAGQNHIGYGQ---ETVRYYTTPEGPPTG 90
           +   N +G  +    +  Y  +  GP +G
Sbjct: 93  VRALNMLGESEPSAPSRPYVVSGSGPSSG 121

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 47.8 bits (114), Expect = 4e-07
 Identities = 12/85 (14%), Positives = 25/85 (29%), Gaps = 4/85 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           ++ L W   T        Y ++       ++ +    + K   + +  L     Y F + 
Sbjct: 31  SVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVR 90

Query: 67  GQNHIGYGQ--ETVRYYTTPEGPPT 89
             N  G            T +  P+
Sbjct: 91  AINPQGLSDPSPMSDPVRTQDSGPS 115

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 117

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 83  TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN--VIHR 140
                P GPP+       T + V ++W P   T        Y ++   +  +N+   +  
Sbjct: 11  DLSDLP-GPPSKPQVTDVTKNSVTLSWQPG--TPGTLPASAYIIEAFSQSVSNSWQTVAN 67

Query: 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
           +   T      L     Y   V+AI   G    SP    +  +D
Sbjct: 68  HVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQD 111

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 47.6 bits (113), Expect = 5e-07
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 11/126 (8%)

Query: 60  EYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG 119
            +    +         E + +  +    PT     +     TP  + I+WD P       
Sbjct: 4   HHHHHSSDYKDDDDKGENLYFQGSVSDVPT----KLEVVAATPTSLLISWDAP-----AV 54

Query: 120 QIVLYNVKFHKKIDANNV--IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKL 177
            +  Y + + +    + V       +++ A  S L+ G++Y+  V A+T         K 
Sbjct: 55  TVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAGSKP 114

Query: 178 SLMTAR 183
             +  R
Sbjct: 115 ISINYR 120

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 44.5 bits (105), Expect = 5e-06
 Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 5/70 (7%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           ++ + W  P      +  YR+ YG       ++E  V     +  I+ L+ GV+Y   + 
Sbjct: 44  SLLISWDAPA---VTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVY 100

Query: 67  GQNHIGYGQE 76
               +     
Sbjct: 101 AVTGLRLMLA 110

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 18/120 (15%), Positives = 40/120 (33%), Gaps = 34/120 (28%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  ++ +A +  S+ + W         +  Y+I Y  T         + ++P ++S   
Sbjct: 31  VPTKLEVVAATPTSLLISWDAPA---VTVRYYRITYGETG--GNSPVQEFTVPGSKS--- 82

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG-RLSGKVTV 306
                                    +A ++ L+   +Y + V A T   L    S  +++
Sbjct: 83  -------------------------TATISGLKPGVDYTITVYAVTGLRLMLAGSKPISI 117

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 46.9 bits (112), Expect = 5e-07
 Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 81  YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVI 138
           +++P  PP G P  ++    T   V + W  P  T    +I  Y V+     +       
Sbjct: 7   HSSPIDPP-GKPVPLNI---TRHTVTLKWAKPEYTG-GFKITSYIVEKRDLPNGRWLKAN 61

Query: 139 HRNTTQTKAVFSNLEEGIEYSAEVQAITKAGP-GPWSPKLSLMTARDMVRA 188
             N  + +   S L E   Y   V A   AG   P S     +T RD V A
Sbjct: 62  FSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVEA 112

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 46.6 bits (111), Expect = 7e-07
 Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 18/100 (18%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
           T+ L W++P  T G +I  Y V+         LK N  N     F ++ L     YEFR+
Sbjct: 26  TVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRV 85

Query: 66  AGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVV 105
             +N  G                  PP+  S      D V
Sbjct: 86  IAKNAAG---------------AISPPSEPSDAITCRDDV 110

>2csp_A RIM-BP2, RIM binding protein 2; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 7/119 (5%)

Query: 76  ETVRYYTTPEGPPTGPPANIS-HHFQTPDVVCITWDPPLR----THRNGQIVLYNVKFHK 130
             V + T P GPP  PP +++     TP  + ++W PP+           +  Y V + K
Sbjct: 6   SGVEFSTLPAGPP-APPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGV-YAK 63

Query: 131 KIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
                 VI      T      L         V+ ++  G    S   ++     +   P
Sbjct: 64  GQRVAEVIFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPPTP 122

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 127

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 11/107 (10%)

Query: 76  ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLY-------NVKF 128
           E + Y T P  PP+      +    + D + + W        +   + Y       N   
Sbjct: 8   EGLDYLTAP-NPPSIREELCT---ASHDTITVHWISDDEFSISSYELQYTIFTGQANFIS 63

Query: 129 HKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
                 + +I  N  Q       L+ G  Y   V+AI +AG     P
Sbjct: 64  LYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEP 110

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 127

 Score = 44.9 bits (106), Expect = 4e-06
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 14/97 (14%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNS-----------KNMSFLITNLER 57
           TI + W    +    I  Y ++Y +         + +           K   + +  L+ 
Sbjct: 32  TITVHWISDDE--FSISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQS 89

Query: 58  GVEYEFRIAGQNHIGYGQ-ETVRYYTTPEGPPTGPPA 93
           G  Y F +   N  G    E  R  T  +   +GP +
Sbjct: 90  GTRYIFIVKAINQAGSRNSEPTRLKTNSQPFKSGPSS 126

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} Length = 317

 Score = 48.7 bits (115), Expect = 1e-06
 Identities = 40/261 (15%), Positives = 77/261 (29%), Gaps = 26/261 (9%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKA 147
              PP N +        V + W P     +    + Y VK +   + +       T++KA
Sbjct: 11  SLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETR--ITESKA 68

Query: 148 VFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWK 207
           V   L  G   S  V+ I +      +   +       + AP G     TS  ++     
Sbjct: 69  VT-ILHMGFSAS--VRTILQNDHSLLASSWASAE----LHAPPGS--PGTSIVNLTCTTN 119

Query: 208 PVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE-WSQK 266
                  ++  YQ+    T       W   +    ++       Y     E  +      
Sbjct: 120 TTEDNYSRLRSYQVSLHCT-------WMVGTDAPEDTQYFLYYRYGSWTEECQEYSMDTL 172

Query: 267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG-----KVTVKVKPEDVPLSLRAHD 321
              +      T +       +AV     +    +        +    +  + PL++ A  
Sbjct: 173 GRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQI-NPPLNVTAEI 231

Query: 322 VSTHSMTLSWSPPIKLNPVKY 342
             T  M++ W  P+   P+  
Sbjct: 232 EGTR-MSIQWEKPVSAFPIHC 251

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} Length = 317

 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 7/117 (5%)

Query: 61  YEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ 120
               + G +     +   + +         PP N++        + I W+ P  +     
Sbjct: 193 LAVLVNGSSKHSAIRPFDQLFALHAIDQINPPLNVTAEI-EGTRMSIQWEKP-VSAFPIH 250

Query: 121 IVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK---AGPGPWS 174
              Y VK H   +    I +    T A  S +++  +Y  +V+A         G WS
Sbjct: 251 CFDYEVKIHNTRNGYLQIEKL--MTNAFISIIDDLSKYDVQVRAAVSSMCREAGLWS 305

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A Length = 236

 Score = 48.3 bits (114), Expect = 1e-06
 Identities = 18/131 (13%), Positives = 41/131 (31%), Gaps = 7/131 (5%)

Query: 49  SFLITNLERGVEYEFRIAGQNHIGYGQE---TVRYYTTPEGPPTGPPANISHHFQTPDVV 105
            F  +     + Y  ++         +           P         N+S      D+ 
Sbjct: 95  YFNSSFTSIAIPYCIKLTSNGGTVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQ 154

Query: 106 CITWDPPLRTH-RNGQIVL-YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQ 163
            + W+ P     + G +VL Y +++ +  +    +      T     +L+   EY   V+
Sbjct: 155 -VRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYEVRVR 213

Query: 164 AITKAGPGPWS 174
           +  +   G + 
Sbjct: 214 SKQRNS-GNYG 223

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} Length = 206

 Score = 47.8 bits (113), Expect = 2e-06
 Identities = 28/232 (12%), Positives = 64/232 (27%), Gaps = 50/232 (21%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--------NT 142
            P  +S        +   W P       G+ V Y+V++  + ++    H          T
Sbjct: 9   APQQLSVLSTNMKHLL-MWSPV---IAPGETVYYSVEYQGEYESLYTSHIWIPSSWCSLT 64

Query: 143 TQTKAVFS-NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQS 201
              +   + ++   + Y+  V+A   +    WS        +  +    G++        
Sbjct: 65  EGPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRQSTILTRPGMEITKDGF-H 123

Query: 202 VEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD 261
           + +  + +    G    + + Y          W ++                       +
Sbjct: 124 LVIELEDL----GPQFEFLVAY----------WRREP--------------------GAE 149

Query: 262 EWSQKSVPLTESAELTSLEKFTEYAVAVAART--VNGLGRLSGKVTVKVKPE 311
           E  +          L ++E    Y V        +      S    V+V+ E
Sbjct: 150 EHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQGE 201

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 6/83 (7%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           T+ L W            Y V+      +   +E  V       L+  LE G +YE  + 
Sbjct: 24  TVHLTWQPS----AGATHYLVRCSPASPKGEEEEREVQVGRPEVLLDGLEPGRDYEVSVQ 79

Query: 67  GQNHIGYGQETVRYYTTPEGPPT 89
                   +       TP   P+
Sbjct: 80  SLRGPEGSEARGIRARTPTSGPS 102

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 4/93 (4%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
           ++    P  PP  ++    TP  V +TW P         +V  +    K  +    +   
Sbjct: 2   SSGSSGPLPPPRALTLAAVTPRTVHLTWQPSAGA--THYLVRCSPASPKGEEEEREV--Q 57

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
             + + +   LE G +Y   VQ++         
Sbjct: 58  VGRPEVLLDGLEPGRDYEVSVQSLRGPEGSEAR 90

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 37.9 bits (88), Expect = 8e-04
 Identities = 18/129 (13%), Positives = 38/129 (29%), Gaps = 40/129 (31%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  +   A + ++V + W+P          Y +  +  + +                  
Sbjct: 11  PPRALTLAAVTPRTVHLTWQPSAG----ATHYLVRCSPASPK------------------ 48

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV 306
                         E  ++ V +      L  LE   +Y V+V +  + G    S    +
Sbjct: 49  -------------GEEEEREVQVGRPEVLLDGLEPGRDYEVSVQS--LRGPEG-SEARGI 92

Query: 307 KVK-PEDVP 314
           + + P   P
Sbjct: 93  RARTPTSGP 101

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 22/104 (21%), Positives = 33/104 (31%), Gaps = 3/104 (2%)

Query: 73  YGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI 132
            G             P GPP  +       + V +TW PP     N  I  Y ++   K 
Sbjct: 3   SGSSGASIDIQIIDRP-GPPQIVKIEDVWGENVALTWTPPKDDG-NAAITGYTIQKADKK 60

Query: 133 DAN-NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
                 +  +  +T A  + L  G EY   V +    G    + 
Sbjct: 61  SMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDAT 104

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} Length = 120

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 9   TIELVWSQPTQTYG-EILGYRV-KYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
            + L W+ P       I GY + K   +       + +    S  IT L  G EY FR+ 
Sbjct: 33  NVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITELVIGNEYYFRVF 92

Query: 67  GQNHIGYGQ 75
            +N  G  +
Sbjct: 93  SENMCGLSE 101

>1y6k_R Interleukin-10 receptor alpha chain; helix bundle, receptor complex, immune system; 2.52A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1j7v_R* 1lqs_R 1y6m_R 1y6n_R Length = 214

 Score = 47.0 bits (111), Expect = 3e-06
 Identities = 28/188 (14%), Positives = 53/188 (28%), Gaps = 16/188 (8%)

Query: 12  LVWSQPTQTYGEILGYRV---KYGVREHTLKENLVN--SKNMSFLITNLERGVEYEFRIA 66
           L W  P     E   Y V   +YG+             S +++ +  +L     Y  R+ 
Sbjct: 22  LHW-TPIPQQSESTCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVR 80

Query: 67  GQNHIGY--GQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRN------ 118
             +   +     T   ++  E   T    N+  H            P +   ++      
Sbjct: 81  AVDGSRHSQWTVTNTRFSVDEVTLTVGSVNLEIHNGFILGKIQLPRPKMAPAQDTYESIF 140

Query: 119 GQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGP--GPWSPK 176
                Y +   K        H+     +       E  E+  +V+    +    G WS +
Sbjct: 141 SHFREYEIAIRKVPGQFTFTHKKVKHEQFSLLTSGEVGEFCVQVKPSVASRSNKGMWSKE 200

Query: 177 LSLMTARD 184
             +   R 
Sbjct: 201 ECISLTRQ 208

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* Length = 214

 Score = 47.1 bits (111), Expect = 3e-06
 Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 7/98 (7%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDA---NNVIHRNTTQTKA 147
            P ++           I+W+    +H   + + +  +            ++     Q   
Sbjct: 108 APISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWI 167

Query: 148 VFSNLEEGIEYSAEVQAITKAGPG----PWSPKLSLMT 181
               L    +Y  +V+     G      PWS  L+  T
Sbjct: 168 CLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRT 205

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* Length = 214

 Score = 43.6 bits (102), Expect = 3e-05
 Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 9/94 (9%)

Query: 3   KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKEN---LVNSKNMSFLITNLERGV 59
            E     I    SQ +  +   L +  +     HT +E     +  K     +  L    
Sbjct: 117 VETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDT 176

Query: 60  EYEFRIAGQNHIGYGQ------ETVRYYTTPEGP 87
           +YEF++  +   G         + + + T P   
Sbjct: 177 QYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAAL 210

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 44.9 bits (106), Expect = 3e-06
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT---TQTK 146
             P ++     TP  + I+WD        G    Y + +  +   N+ +   T       
Sbjct: 5   DVPRDLEVVAATPTSLLISWDSG-----RGSYQYYRITY-GETGGNSPVQEFTVPGPVHT 58

Query: 147 AVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
           A  S L+ G++Y+  V A+T   P    P
Sbjct: 59  ATISGLKPGVDYTITVYAVTDHKPHADGP 87

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 43.7 bits (103), Expect = 8e-06
 Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 12/99 (12%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRI- 65
           ++ + W       G    YR+ YG       ++E  V     +  I+ L+ GV+Y   + 
Sbjct: 19  SLLISWDSGR---GSYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVY 75

Query: 66  AGQNHIGYGQETVRYYTTPEGP-----PTGPPAN-ISHH 98
           A  +H  +      Y+ +P           P  +   HH
Sbjct: 76  AVTDHKPHADGPHTYHESPISINYRTEIDKPSQHHHHHH 114

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 41.4 bits (97), Expect = 6e-05
 Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 40/141 (28%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            P  ++ +A +  S+ + W       G    Y+I Y  T         + ++P    +  
Sbjct: 6   VPRDLEVVAATPTSLLISWDSGR---GSYQYYRITYGETGGNS--PVQEFTVPGPVHT-- 58

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK---- 303
                                     A ++ L+   +Y + V A T +            
Sbjct: 59  --------------------------ATISGLKPGVDYTITVYAVTDHKPHADGPHTYHE 92

Query: 304 --VTVKVKPE-DVPLSLRAHD 321
             +++  + E D P     H 
Sbjct: 93  SPISINYRTEIDKPSQHHHHH 113

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 137

 Score = 45.4 bits (107), Expect = 4e-06
 Identities = 18/108 (16%), Positives = 38/108 (35%), Gaps = 19/108 (17%)

Query: 4   EEPEVT------IELVWSQPTQTYG---------EILGYRVKYGVREHTLK-ENLVNSKN 47
            +P  +      + L WS P+             E+ GY V         K +++   + 
Sbjct: 22  VKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEE 81

Query: 48  MSFLITNLERGVEYEFRIAGQNHIGYGQ--ETVRYYTTPEGPPTGPPA 93
            +  + +L+  ++Y  ++  + +   G   E    +TT    P  P  
Sbjct: 82  TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEI-FTTLSCEPDIPNP 128

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 137

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 20/114 (17%), Positives = 33/114 (28%), Gaps = 13/114 (11%)

Query: 76  ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ-------IVLYNVKF 128
           ET  +            ++I         V +TW PP               +  Y V  
Sbjct: 10  ETKAFEALLSNIVKPVASDI-----QARTVVLTWSPPSSLINGETDESSVPELYGYEVLI 64

Query: 129 HKKIDANNVIH-RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
                           +T    ++L+  ++Y A+VQA   +  G  S      T
Sbjct: 65  SSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTT 118

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 44.6 bits (105), Expect = 5e-06
 Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 13/92 (14%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV----------REHTLKENLVNSKNMSFLITNLERG 58
           ++ L W  P    G    + +++GV          R    +E +V     S ++ +L  G
Sbjct: 24  SLRLNWEAPP---GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSG 80

Query: 59  VEYEFRIAGQNHIGYGQETVRYYTTPEGPPTG 90
             Y   + G               T  GP +G
Sbjct: 81  TLYSLTLYGLRGPHKADSIQGTARTLSGPSSG 112

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95

 Score = 43.7 bits (103), Expect = 6e-06
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 5/77 (6%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVRE--HTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          +  + W   +     + G+RV+Y + E     +   + S   S  I +L  G +Y   + 
Sbjct: 21 SFVVSWVSAS---DTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVY 77

Query: 67 GQNHIGYGQETVRYYTT 83
            +  G     +    T
Sbjct: 78 QISEDGEQSLILSTSQT 94

>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* Length = 223

 Score = 46.3 bits (109), Expect = 6e-06
 Identities = 17/89 (19%), Positives = 40/89 (44%), Gaps = 4/89 (4%)

Query: 91  PPANISHHFQ-TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
            P ++S  ++   +   +T++      +  ++++++V + ++ D N   H N + TK   
Sbjct: 115 APFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNLSSTKLTL 174

Query: 150 --SNLEEGIEYSAEVQAITKAG-PGPWSP 175
               L+    Y  +V++I      G WS 
Sbjct: 175 LQRKLQPAAMYEIKVRSIPDHYFKGFWSE 203

>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* Length = 223

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 7/95 (7%)

Query: 3   KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVN--SKNMSFLITNLERGVE 60
           +   +  +    S   + Y ++L + V Y   +   K   VN  S  ++ L   L+    
Sbjct: 125 EGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNLSSTKLTLLQRKLQPAAM 184

Query: 61  YEFRIAGQNHIGYGQE-----TVRYYTTPEGPPTG 90
           YE ++       +           Y+ TPE   + 
Sbjct: 185 YEIKVRSIPDHYFKGFWSEWSPSYYFRTPEINNSS 219

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} Length = 238

 Score = 44.9 bits (105), Expect = 2e-05
 Identities = 27/144 (18%), Positives = 40/144 (27%), Gaps = 12/144 (8%)

Query: 40  ENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHF 99
           E      N+S   +++  G      IAG        E              P  +     
Sbjct: 107 EAKTEGSNLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEIVV-----NPVRDFKASE 161

Query: 100 QTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYS 159
                V +TW  P        +  Y +      D   V      +T   F  L     Y+
Sbjct: 162 INKKNVTVTWTEPET---TEGLEGYILY----KDGKKVAEIGKDETSYTFKKLNRHTIYN 214

Query: 160 AEVQAITKAGPGPWSPKLSLMTAR 183
            ++ A    G       L+L TAR
Sbjct: 215 FKIAAKYSNGEVSSKESLTLRTAR 238

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 4e-05
 Identities = 67/468 (14%), Positives = 135/468 (28%), Gaps = 144/468 (30%)

Query: 5   EPEVTIELVWSQPTQTYGEILGYRVKYGV-RE---HTLKENLVNSKNMSFLI-------- 52
           +P +   +   Q  + Y +   +  KY V R      L++ L+  +    ++        
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFA-KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG 162

Query: 53  -TNLERGV--EYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHF-----QTPDV 104
            T +   V   Y+ +      I +    ++   +PE         + +          D 
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFW--LNLKNCNSPETVLE-MLQKLLYQIDPNWTSRSD- 218

Query: 105 VCITWDPPLRT---------------HRNGQIVLYNVKFHKKIDANNV-----IHRNTTQ 144
              + +  LR                + N  +VL NV+  K  +A N+     +   TT+
Sbjct: 219 --HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL---TTR 273

Query: 145 TKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEV 204
            K V   L                        +SL    D     L      T D+   +
Sbjct: 274 FKQVTDFLSAATTT-----------------HISL----DHHSMTL------TPDEVKSL 306

Query: 205 WWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTES-------SNIARI-FYTMTA 256
                     K L           +DL      + P   S         +A    +    
Sbjct: 307 L--------LKYLD-------CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVN 351

Query: 257 VEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV-------- 308
            + L    + S+ + E AE   +  F   +V             S  +   +        
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKM--FDRLSVF----------PPSAHIPTILLSLIWFDV 399

Query: 309 KPEDVPLSLRAHDVSTHSMTLSWSPPIKLN-PVKYKEVSEKIQERR------LQKYGQYR 361
              DV + +  + +  +S+         ++ P  Y E+  K++         +  Y   +
Sbjct: 400 IKSDVMVVV--NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 362 YFETRDE----------SYIGKRVERMEVRGRKGRGRPKK----RWMD 395
            F++ D           S+IG  ++ +E    +           R+++
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIE-HPERMTLFRMVFLDFRFLE 504

>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R* Length = 211

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 26/217 (11%), Positives = 60/217 (27%), Gaps = 38/217 (17%)

Query: 84  PEGPPTGPPANI---SHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVI 138
           PE P      ++   S +F+      +TWD            +Y++++    + +     
Sbjct: 1   PEDPS-DLLQHVKFQSSNFEN----ILTWDSG---PEGTPDTVYSIEYKTYGERDWVAKK 52

Query: 139 H-RNTTQTKAVFSN--LEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKAL 195
             +  T+     +         Y A V A++  G           + +     P  V   
Sbjct: 53  GCQRITRKSCNLTVETGNLTELYYARVTAVSAGGRSATKMTDRFSSLQHTTLKPPDVT-C 111

Query: 196 ATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMT 255
            +  +S+++   P P       G+++                        +I    +   
Sbjct: 112 ISKVRSIQMIVHPTPTPIRAGDGHRLTL---------------------EDIFHDLFYHL 150

Query: 256 AVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAAR 292
            ++    +           E   L   TE+   +   
Sbjct: 151 ELQVNRTYQMHLGGKQREYEFFGLTPDTEFLGTIMIL 187

>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 4/87 (4%)

Query: 91  PPANISHHF--QTPDVVCITWDPPLRTHRNGQIVL-YNVKFHKKIDANNVIHRNTTQTKA 147
           PP N+        P  + +TW  P          L + +++   I         +  T  
Sbjct: 10  PPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNGTAH 69

Query: 148 VFSNLEEGIEYSAEVQAITKAGPGPWS 174
             ++   G EY  +V A      G WS
Sbjct: 70  TITDAYAGKEYIIQVAAKDN-EIGTWS 95

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	427
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	100.0
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	100.0
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	100.0
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	100.0
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	100.0
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	100.0
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	100.0
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	100.0
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	100.0
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	100.0
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	100.0
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	99.98
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	99.98
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	99.97
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	99.97
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	99.97
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	99.97
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	99.96
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	99.95
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	99.95
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	99.95
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	99.94
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	99.94
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	99.94
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	99.93
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	99.93
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	99.93
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	99.93
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	99.92
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	99.92
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	99.92
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	99.92
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	99.91
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	99.9
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	99.9
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	99.9
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	99.9
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	99.9
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	99.9
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	99.9
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	99.89
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	99.89
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	99.89
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	99.88
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	99.88
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	99.88
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	99.87
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	99.87
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	99.87
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	99.86
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	99.86
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	99.85
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	99.84
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	99.84
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	99.84
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	99.83
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	99.82
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	99.82
4go6_B	232	HCF C-terminal chain 1; tandem fibronectin repeat,	99.81
4go6_B	232	HCF C-terminal chain 1; tandem fibronectin repeat,	99.79
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	99.78
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	99.77
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	99.77
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	99.76
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	99.73
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	99.73
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	99.73
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	99.73
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	99.71
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	99.71
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	99.7
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	99.7
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	99.7
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	99.69
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	99.69
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	99.68
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	99.68
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	99.68
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	99.66
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	99.65
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	99.65
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	99.64
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	99.64
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	99.63
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	99.63
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	99.63
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	99.62
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	99.62
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	99.62
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	99.61
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	99.61
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	99.61
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	99.61
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	99.6
2crm_A	120	Fibronectin type-III domain containing protein 3A;	99.6
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	99.6
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	99.6
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	99.6
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	99.59
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	99.59
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	99.59
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	99.58
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	99.58
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	99.57
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	99.57
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	99.57
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	99.57
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	99.57
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	99.57
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	99.57
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	99.56
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	99.56
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	99.56
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	99.56
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	99.56
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	99.56
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	99.55
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	99.55
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	99.54
2crz_A	110	Fibronectin type-III domain containing protein 3A;	99.54
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	99.54
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	99.54
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	99.53
3qt2_A	317	Interleukin-5 receptor subunit alpha; cytokine typ	99.53
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	99.53
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	99.53
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	99.53
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	99.53
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	99.53
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	99.53
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	99.52
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	99.52
2crm_A	120	Fibronectin type-III domain containing protein 3A;	99.52
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	99.52
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	99.52
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	99.52
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	99.52
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	99.51
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	99.5
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	99.5
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	99.5
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	99.5
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	99.49
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	99.49
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	99.49
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	99.49
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	99.49
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	99.49
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	99.49
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	99.48
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	99.48
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	99.48
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	99.47
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	99.47
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	99.47
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	99.47
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	99.47
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	99.46
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	99.46
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	99.46
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	99.46
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	99.46
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	99.45
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	99.45
2crz_A	110	Fibronectin type-III domain containing protein 3A;	99.44
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	99.44
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	99.44
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	99.44
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	99.43
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	99.43
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	99.43
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	99.43
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	99.43
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	99.42
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	99.42
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	99.42
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	99.42
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	99.41
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	99.41
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	99.41
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	99.41
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	99.4
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	99.4
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	99.4
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	99.39
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	99.38
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	99.38
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	99.37
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	99.37
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	99.37
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	99.37
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	99.36
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	99.36
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	99.36
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	99.36
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	99.35
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	99.35
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	99.35
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	99.35
2erj_C	247	Cytokine receptor common gamma chain; immune syste	99.35
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	99.34
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	99.34
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	99.34
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	99.33
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	99.32
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	99.32
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	99.31
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	99.3
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	99.3
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	99.29
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	99.28
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	99.28
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	99.28
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	99.28
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	99.27
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	99.26
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	99.26
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	99.26
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	99.26
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	99.25
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	99.25
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	99.25
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	99.24
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	99.23
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	99.23
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	99.2
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	99.19
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	99.19
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	99.19
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	99.18
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	99.18
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	99.18
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	99.17
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	99.17
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	99.17
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	99.17
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	99.15
3up1_A	223	Interleukin-7 receptor subunit alpha; cytokine rec	99.15
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	99.14
1uc6_A	109	CNTF receptor, ciliary neurotrophic factor recepto	99.14
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	99.12
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	99.1
1uc6_A	109	CNTF receptor, ciliary neurotrophic factor recepto	99.1
2erj_C	247	Cytokine receptor common gamma chain; immune syste	99.09
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	99.09
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	99.09
3d85_D	306	IL-12B, interleukin-12 subunit P40, cytotoxic lymp	99.07
3up1_A	223	Interleukin-7 receptor subunit alpha; cytokine rec	99.06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.01
3og6_B	226	Interleukin 28 receptor, alpha (interferon, lambd	99.0
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	99.0
1iar_B	207	Protein (interleukin-4 receptor alpha chain); cyto	99.0
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	99.0
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	98.99
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	98.98
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	98.98
3tgx_A	219	Interleukin-21 receptor; class I cytokine, class I	98.95
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	98.95
3d85_D	306	IL-12B, interleukin-12 subunit P40, cytotoxic lymp	98.92
3mpc_A	103	FN3-like protein; fibronectin, FN(III), unknown fu	98.9
1iar_B	207	Protein (interleukin-4 receptor alpha chain); cyto	98.89
3mpc_A	103	FN3-like protein; fibronectin, FN(III), unknown fu	98.88
1fyh_B	229	Interferon-gamma receptor alpha chain; cytokine-re	98.81
3dlq_R	211	Interleukin-22 receptor subunit alpha-1; cytokine-	98.79
3og6_B	226	Interleukin 28 receptor, alpha (interferon, lambd	98.77
3dlq_R	211	Interleukin-22 receptor subunit alpha-1; cytokine-	98.76
1q38_A	89	Fibronectin; amyloid fibril, anastellin, extracell	98.73
1fyh_B	229	Interferon-gamma receptor alpha chain; cytokine-re	98.68
3tgx_A	219	Interleukin-21 receptor; class I cytokine, class I	98.68
1y6k_R	214	Interleukin-10 receptor alpha chain; helix bundle,	98.57
3csg_A	461	MBP, maltose-binding protein monobody YS1 fusion,	98.56
3s9d_B	199	Interferon alpha/beta receptor 2; human, type I in	98.55
2hft_A	218	Human tissue factor; coagulation factor; 1.69A {Ho	98.54
3csg_A	461	MBP, maltose-binding protein monobody YS1 fusion,	98.52
1y6k_R	214	Interleukin-10 receptor alpha chain; helix bundle,	98.51
1oww_A	98	FN, fibronectin first type III module, CIG; fibron	98.47
3s9d_B	199	Interferon alpha/beta receptor 2; human, type I in	98.44
1wft_A	123	1700129L13RIK protein; FN3 domain, similar to HOST	98.38
1wft_A	123	1700129L13RIK protein; FN3 domain, similar to HOST	98.38
1oww_A	98	FN, fibronectin first type III module, CIG; fibron	98.21
1q38_A	89	Fibronectin; amyloid fibril, anastellin, extracell	98.18
2hft_A	218	Human tissue factor; coagulation factor; 1.69A {Ho	98.13
3bes_R	250	Interferon-gamma binding protein C4R; orthopoxviru	97.59
2csp_A	130	RIM-BP2, RIM binding protein 2; FN3 domain, struct	97.22
3b4n_A	344	Endo-pectate lyase; pectin, galacturonic acid, rig	97.21
2csp_A	130	RIM-BP2, RIM binding protein 2; FN3 domain, struct	97.21
3bes_R	250	Interferon-gamma binding protein C4R; orthopoxviru	97.13
3cxe_C	120	Granulocyte-macrophage colony-stimulating factor s	96.9
3pdd_A	190	Glycoside hydrolase, family 9; CBHA, beta-sandwich	96.79
3pdd_A	190	Glycoside hydrolase, family 9; CBHA, beta-sandwich	96.62
3b4n_A	344	Endo-pectate lyase; pectin, galacturonic acid, rig	96.34
2uvf_A	608	Exopolygalacturonase; GH28, pectin, cell WALL, hyd	96.15
4go6_A	45	HCF N-terminal chain 1; tandem fibronectin repeat,	95.46
2uvf_A	608	Exopolygalacturonase; GH28, pectin, cell WALL, hyd	94.82
3cxe_C	120	Granulocyte-macrophage colony-stimulating factor s	94.36
4go6_A	45	HCF N-terminal chain 1; tandem fibronectin repeat,	93.34
3arx_A	584	Chitinase A; TIM barrel, inhibitor complex, glycos	92.55
3arx_A	584	Chitinase A; TIM barrel, inhibitor complex, glycos	91.34
1e07_A	642	Carcinoembryonic antigen; glycoprotein, CEA, tumou	89.22
1xzw_A	426	Purple acid phosphatase; hydrolase; HET: NAG FUC M	88.07
4gns_A	290	Chitin biosynthesis protein CHS5; FN3, BRCT, tetra	87.46
2qfp_A	424	Purple acid phosphatase; binuclear, Fe-Zn, hydrola	86.93
2w91_A	653	Endo-beta-N-acetylglucosaminidase D; hydrolase, N-	86.79
4gns_A	290	Chitin biosynthesis protein CHS5; FN3, BRCT, tetra	86.77
2qfp_A	424	Purple acid phosphatase; binuclear, Fe-Zn, hydrola	86.67
2w91_A	653	Endo-beta-N-acetylglucosaminidase D; hydrolase, N-	85.65
1edq_A	540	Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1	84.32
1xzw_A	426	Purple acid phosphatase; hydrolase; HET: NAG FUC M	83.19
1edq_A	540	Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1	82.11
3dmk_A	816	DOWN syndrome cell adhesion molecule (dscam) ISOF	81.02
3gdb_A	937	Endo-D, putative uncharacterized protein SPR0440;	80.11

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B

Probab=100.00  E-value=1.6e-37  Score=294.08  Aligned_cols=340  Identities=17%  Similarity=0.220  Sum_probs=260.7

Q ss_pred             Cccce-EEEEEeeCCCCCCCcceEeEEEEEEecCc---cceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce
Q psy8774           4 EEPEV-TIELVWSQPTQTYGEILGYRVKYGVREHT---LKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         4 ~~~~~-sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      ..+++ +|.|+|+++.  .+.+.+|+|+|+..++.   .+........+++.+.+|.|++.|.|+|+|.+..|.+.....
T Consensus        13 ~~~~~~sv~l~W~~~~--~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~   90 (375)
T 3t1w_A           13 ANPDTGVLTVSWERST--TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISD   90 (375)
T ss_dssp             EETTTTEEEEEEECCS--CSSCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEEEETTEECCCEEE
T ss_pred             ecCCCeEEEEEEeCCC--CCCeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEe
Confidence            45667 9999999986  35789999999986543   233333677899999999999999999999998887765443


Q ss_pred             EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--EeeeeeEEEEccCCCCcE
Q psy8774          80 YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTTQTKAVFSNLEEGIE  157 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~  157 (427)
                      .  +....|  +|.++.+...+.+++.|+|+++.    ++.+.+|.|+|+..+.......  .....+++.|.+|.|++.
T Consensus        91 ~--~~~~~p--~p~~l~~~~~~~~si~l~W~~~~----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~  162 (375)
T 3t1w_A           91 T--IIPEVP--QLTDLSFVDITDSSIGLRWTPLN----SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGID  162 (375)
T ss_dssp             E--ECCCCC--CCSCCEEECCCSSEEEEECCCCC----CTTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCE
T ss_pred             e--EcCCCC--CCceEEEEecCCCeEEEEEECCC----CCCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCE
Confidence            3  333444  37899999999999999999873    3689999999998744333332  334588999999999999


Q ss_pred             EEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccc
Q psy8774         158 YSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQK  237 (427)
Q Consensus       158 Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~  237 (427)
                      |.|+|+|.|..|.|..+. ..+.+   .+.+|.++.+...+.+++.|+|++|.  ++.+.+|.|+|+..+...  .+.  
T Consensus       163 Y~~~V~a~~~~g~s~~s~-~~~~t---~~~~p~~l~~~~~~~~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~--~~~--  232 (375)
T 3t1w_A          163 YDISVITLINGGESAPTT-LTQQT---AVPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEE--DVA--  232 (375)
T ss_dssp             EEEEEEEEETTEECCCEE-EEEEC---CCCCCEEEEEESCCSSCEEEEEECCS--SCCCCEEEEEEEEGGGTT--CCE--
T ss_pred             EEEEEEEEeCCcccCCee-eeeec---CCCCCceeEEEecccCEEEEEEcCCC--CCCccEEEEEEEeCCCCC--CcE--
Confidence            999999999999886554 34444   34588999999999999999999975  467999999999863221  110  


Q ss_pred             cccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCcce
Q psy8774         238 SIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSL  317 (427)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~~l  317 (427)
                                                ........++++|.+|.|++.|.|+|+|++..|.|..+. ..+.| ++.+|.++
T Consensus       233 --------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~-~~~~t-~p~~P~~l  284 (375)
T 3t1w_A          233 --------------------------ELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR-GRQKT-GLDSPTGI  284 (375)
T ss_dssp             --------------------------EEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC-CCCCCEEE
T ss_pred             --------------------------EEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCcee-eEEec-CCCCCCcc
Confidence                                      122334568999999999999999999999998887664 44555 55688899


Q ss_pred             EEeecCCCeEEEEecCCCcCCCceEEEEEeheee-c---ceeeeeeEEEEeecccccccceEEEEEeecccCCCCcchh
Q psy8774         318 RAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQE-R---RLQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKKR  392 (427)
Q Consensus       318 ~~~~~~~~~v~l~W~~P~~~~g~~Y~i~~~~~~~-~---~l~~~t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~~  392 (427)
                      ++...+.+++.|+|++|. ....+|.|.+..... .   .......-..+....|.+...|.|+|+|.+..|.|+|...
T Consensus       285 ~~~~~~~~sv~l~W~~p~-~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~  362 (375)
T 3t1w_A          285 DFSDITANSFTVHWIAPR-ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIG  362 (375)
T ss_dssp             EEESCCSSCEEEEEECCS-SCCSEEEEEEEETTCCSSCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred             EeeeccCCEEEEEECCCC-cceeeEEEEEEECCCCCcceeEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCCCceee
Confidence            998889999999999985 344599998864332 1   1111111223467889999999999999999999999763

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A

Probab=100.00  E-value=3.3e-37  Score=291.20  Aligned_cols=337  Identities=19%  Similarity=0.251  Sum_probs=257.1

Q ss_pred             ccce-EEEEEeeCCCCCCCcceEeEEEEEEecCcc---ceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceE
Q psy8774           5 EPEV-TIELVWSQPTQTYGEILGYRVKYGVREHTL---KENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRY   80 (427)
Q Consensus         5 ~~~~-sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~   80 (427)
                      .+.+ +|.|+|+++.  ++.+.+|+|+|+..++..   +........+++.+.+|.|++.|.|+|+|.+..|.+.+....
T Consensus        13 ~~~~~sv~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~   90 (368)
T 1fnf_A           13 NPDTGVLTVSWERST--TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDT   90 (368)
T ss_dssp             CSSSSCEEEEEECCS--CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEEETTEECCCEEEE
T ss_pred             cCCCcEEEEEEeCCC--CCCceEEEEEEEECCCCCCceeEEEecCCcCEEEECCCCCCCEEEEEEEEEcCCCccCceeee
Confidence            4454 5999999986  568999999999866542   334346678999999999999999999999999987655443


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE--eeeeeEEEEccCCCCcEE
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--NTTQTKAVFSNLEEGIEY  158 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y  158 (427)
                      ..+  ..  .+|.++.+...+.+++.|+|+++.    ++.+.+|.|+|+.......+...  ....+++.+.+|.|++.|
T Consensus        91 ~~~--~~--~~p~~l~~~~~~~~si~l~W~~p~----~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y  162 (368)
T 1fnf_A           91 IIP--AV--PPPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEY  162 (368)
T ss_dssp             ECC--CC--CCCEEEEEESCCSSCEEEEEECCT----TCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEE
T ss_pred             ecC--CC--cCCceeEEEEcCCCeEEEEeeCCC----CCCCcEEEEEEEECCCCCccEEEEcCCCcceEEecCCCCCCEE
Confidence            332  22  268899999889999999999984    25788999999987544333332  345789999999999999


Q ss_pred             EEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccccccccc
Q psy8774         159 SAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKS  238 (427)
Q Consensus       159 ~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~  238 (427)
                      .|+|+|.+..|.+..   ..... ..+|.+|.++.+...+.+++.|+|++|.   +.+.+|.|+|+.........     
T Consensus       163 ~~~V~a~~~~g~s~~---~~~~~-~~~~~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~-----  230 (368)
T 1fnf_A          163 VVSVSSVYEQHESTP---LRGRQ-KTGLDSPTGIDFSDITANSFTVHWIAPR---ATITGYRIRHHPEHFSGRPR-----  230 (368)
T ss_dssp             EEEEEEEETTEECCC---EEEEE-ECCCCCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECSCCSSCCE-----
T ss_pred             EEEEEEEeCCCCCCC---eEeee-cCCCCCCCccEEEEccCCEEEEEEeCCC---CCcCEEEEEEecCCCCCCcc-----
Confidence            999999999887632   33332 2345788999999999999999999986   78999999998763211111     


Q ss_pred             ccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCcceE
Q psy8774         239 IPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLR  318 (427)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~~l~  318 (427)
                                               ........++++|.+|.|++.|.|+|+|.|..|.|..+. ....+ ++.+|.+|+
T Consensus       231 -------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~-~~~~t-~p~~P~~l~  283 (368)
T 1fnf_A          231 -------------------------EDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI-GQQST-VSDVPRDLE  283 (368)
T ss_dssp             -------------------------EEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEE-EEEEC-CCCSCEEEE
T ss_pred             -------------------------EEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCccc-ccccC-CCCCCCeeE
Confidence                                     122345677899999999999999999999999887765 33344 667888999


Q ss_pred             EeecCCCeEEEEecCCCcCCCceEEEEEeheeecc----eeeeeeEEEEeecccccccceEEEEEeecccCCCCcch
Q psy8774         319 AHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQERR----LQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKK  391 (427)
Q Consensus       319 ~~~~~~~~v~l~W~~P~~~~g~~Y~i~~~~~~~~~----l~~~t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~  391 (427)
                      +...+.+++.|+|++|.. ...+|+|.+.......    ..-.+.-..+....|.+...|.|+|+|.+.+|.|++..
T Consensus       284 ~~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~  359 (368)
T 1fnf_A          284 VVAATPTSLLISWDAPAV-TVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASS  359 (368)
T ss_dssp             EEEEETTEEEEEEECCSS-CCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCCBC
T ss_pred             EEecCCCEEEEEeeCCCC-ccceEEEEEEECCCCCccEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcccC
Confidence            998899999999999875 3459999976432211    11111123346778999999999999999999998653

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=100.00  E-value=2.4e-36  Score=306.55  Aligned_cols=396  Identities=14%  Similarity=0.172  Sum_probs=270.2

Q ss_pred             CCCccceEEEEEeeCCCC-CCCcceEeEEEEEEecC--------ccceeEeecCcceEEEcCCCCCceEEEEEEEEeccC
Q psy8774           2 LKEEPEVTIELVWSQPTQ-TYGEILGYRVKYGVREH--------TLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIG   72 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~-~~~~i~~Y~v~~~~~~~--------~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g   72 (427)
                      +.++++++|.|+|+++.+ +..++. |.|+|+...+        ..|........+.+.|.+|.|++.|.|+|+|.|..|
T Consensus       169 v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~~~~~w~~v~~~~~~~~~i~~L~P~t~Y~frV~A~n~~G  247 (680)
T 1zlg_A          169 FTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHG  247 (680)
T ss_pred             EEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCccccCceEEEEecCCCeEEeCCCCCCCEEEEEEEEEeCCC
Confidence            456788999999999853 345666 9999997643        457666555678899999999999999999999998


Q ss_pred             -cCccc-ceEEeCCCC-CCCCCCeeeEEEee--cCC---EEEEEeeCCCCCCCCcceeEEEEEEEEccC------CCceE
Q psy8774          73 -YGQET-VRYYTTPEG-PPTGPPANISHHFQ--TPD---VVCITWDPPLRTHRNGQIVLYNVKFHKKID------ANNVI  138 (427)
Q Consensus        73 -~~~~~-~~~~~t~~~-~p~~~p~~~~~~~~--~~~---~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~------~~~~~  138 (427)
                       .+..+ ...+.+... .|+.+|.++++...  +.+   +|.|+|++|.  +.++.+.+|.|+|+....      ...+.
T Consensus       248 ~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~--~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~  325 (680)
T 1zlg_A          248 TRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPE--EPDIPVHHYKVFWSWMVSSKSLVPTKKKR  325 (680)
T ss_pred             CCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEEEecCCC--CCCCceeEEEEEEEecccccccCCccceE
Confidence             33332 344555443 57788999999887  778   9999999884  466899999999983211      11222


Q ss_pred             EEe--eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCC---eEEEcccccCCCCCceEEEeeeCcEEEE---------
Q psy8774         139 HRN--TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPK---LSLMTARDMVRAPLGVKALATSDQSVEV---------  204 (427)
Q Consensus       139 ~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~---~~~~t~~~~p~~p~~l~~~~~~~~si~v---------  204 (427)
                      ...  ...+++.|.+|.|++.|.|+|+|.|..|.|+.|..   +.+.|...+|. |.++.+...+.+++.|         
T Consensus       326 ~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~P~-p~~l~~~~~s~tsi~lp~~~~~~~~  404 (680)
T 1zlg_A          326 RKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNN-KEQLVKTRKGGIQTQLPFQRRRPTR  404 (680)
T ss_pred             EEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCCCC-ccccccccccCccccccccccCCCc
Confidence            222  34688999999999999999999999999988777   78888777776 8899998888888877         


Q ss_pred             --EeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeee-ccccccccc--cccccCCCCceeccCC
Q psy8774         205 --WWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTM-TAVEDLDEW--SQKSVPLTESAELTSL  279 (427)
Q Consensus       205 --~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~l~~L  279 (427)
                        +|.+|... +.+.+|+|+|.............              .|.. ........|  ........++++|.+|
T Consensus       405 ~l~W~~P~~~-~~~~~y~v~w~~~~~~~v~~Y~V--------------~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L  469 (680)
T 1zlg_A          405 PLEVGAPFYQ-DGQLQVKVYWKKTEDPTVNRYHV--------------RWFPEACAHNRTTGSEASSGMTHENYIILQDL  469 (680)
T ss_pred             cccccCCccc-CCcceEEEEEeCCCCCccceEEE--------------EEeeeecccCCCCcceeeeeeccCceEEecCC
Confidence              99999633 45678999998763221111100              0000 000000000  0112345678999999


Q ss_pred             CCCCeEEEEEEEEeccCCCCCccceEEeec--------------------C-----CCCCcc----eEEeecCCCeEEEE
Q psy8774         280 EKFTEYAVAVAARTVNGLGRLSGKVTVKVK--------------------P-----EDVPLS----LRAHDVSTHSMTLS  330 (427)
Q Consensus       280 ~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~--------------------~-----~~~P~~----l~~~~~~~~~v~l~  330 (427)
                      .|++.|.|+|+|.|..|.|.... ..|.|.                    |     ..+|.+    +.+...+.+ +.|+
T Consensus       470 ~p~t~Y~~~V~A~n~~G~s~~~~-~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v~~~P~~l~~~v~v~~~~~t-i~ls  547 (680)
T 1zlg_A          470 SFSCKYKVTVQPIRPKSHSKAEA-VFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNIT-GHFS  547 (680)
T ss_pred             CCCCeEEEEEEEecCCCCCCccc-cceeCCCccccccCCccccccCCCCccccccccCCccccceeEEEeccCce-EEEE
Confidence            99999999999999999654211 111110                    1     156777    555555666 9999


Q ss_pred             ecCCCc-CCC--ceEEEEEeheeecc----eeee---------eeEEEEeecccccccceEEEEEeecccCCCCcchhhh
Q psy8774         331 WSPPIK-LNP--VKYKEVSEKIQERR----LQKY---------GQYRYFETRDESYIGKRVERMEVRGRKGRGRPKKRWM  394 (427)
Q Consensus       331 W~~P~~-~~g--~~Y~i~~~~~~~~~----l~~~---------t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~~~~  394 (427)
                      |++|.. .||  .+|+|.+.......    +...         ..-..+.+..|.+...|.|+|+|.|.+|.|++..  .
T Consensus       548 W~pP~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~~~--~  625 (680)
T 1zlg_A          548 WKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPATI--K  625 (680)
T ss_pred             ecCCCCCCCCCceeEEEEEEEccCCCccccccceeeecccccCCcccEEEecCCCCCceEEEEEEEEcCCCcCCCcc--e
Confidence            999973 455  39999986432111    1100         1123347788999999999999999999998732  2


Q ss_pred             HHHHHhh---ccCCCCcccccchHHHHHHh
Q psy8774         395 DCVNQDL---GEKNLTGHEAHNRAAWKRLT  421 (427)
Q Consensus       395 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~  421 (427)
                      ...+...   +|..+...... .++|+...
T Consensus       626 ~~~T~~~~P~~P~~l~v~~~~-~l~W~pP~  654 (680)
T 1zlg_A          626 TFRTPELPPSSAHRSHLKHRH-PHHYKPSP  654 (680)
T ss_pred             EEECCCCCCCCCCCCeEEecc-ceeECCCC
Confidence            2222222   23334333333 67887653

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=100.00  E-value=4.8e-36  Score=308.02  Aligned_cols=372  Identities=15%  Similarity=0.153  Sum_probs=217.9

Q ss_pred             ccceEEEEEeeCCC-CCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEE--eccCcCccc-ceE
Q psy8774           5 EPEVTIELVWSQPT-QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ--NHIGYGQET-VRY   80 (427)
Q Consensus         5 ~~~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~--~~~g~~~~~-~~~   80 (427)
                      ++.+++.|+|.++. ++++++.+|.|+|+..+ ..|.........++.+.+|.|++.|.|+|.|.  |..|.+..+ ...
T Consensus       273 ~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~  351 (731)
T 2v5y_A          273 VGATYLWIQLNANSINGDGPIVAREVEYCTAS-GSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALR  351 (731)
T ss_dssp             ECSSCEEEECCCSSBSSCSCCCEEEEEEEESS-SSCEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEE
T ss_pred             cCCceEEEEeCCcccCCCCccEEEEEEEEECC-CCceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEE
Confidence            46788999999876 44578999999998754 45665555567899999999999999999999  999998755 467


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE------EeeeeeEEEEccCCC
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH------RNTTQTKAVFSNLEE  154 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~------~~~~~~~~~i~~L~p  154 (427)
                      +.|....|+.+|.++.+...+.+++.|+|++|.....++.+.+|.|+|+....+.....      .....+.+.|.+|.|
T Consensus       352 ~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p  431 (731)
T 2v5y_A          352 TRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSP  431 (731)
T ss_dssp             EECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCS
T ss_pred             eeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCC
Confidence            78888888889999999999999999999998533334577899999988743222111      114478899999999


Q ss_pred             CcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCC--ceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccc
Q psy8774         155 GIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPL--GVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLD  232 (427)
Q Consensus       155 ~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~--~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~  232 (427)
                      ++.|.|+|+|.|..|.| .|..+.++|..++|.+|.  ++.... ..+++.|+|++|...+|.+.+|+|+|+....... 
T Consensus       432 ~t~Y~~~V~A~n~~G~s-~S~~~~~~T~~~~P~~p~~~~~~~~~-~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~~-  508 (731)
T 2v5y_A          432 YTNVSVKLILMNPEGRK-ESQELIVQTDEDLPGAVPTESIQGST-FEEKIFLQWREPTQTYGVITLYEITYKAVSSFDP-  508 (731)
T ss_dssp             SCEEEEEEEEECSSCEE-ECCCEEEECCCCCCCCCCTTTCEEEE-ETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC--
T ss_pred             CCEEEEEEEEEcCCCCC-CCceEEEEccCCCCCCCCcceEEeee-cCCeEEEEEcCCCCCCCCccceEEEEEECcCCCc-
Confidence            99999999999999998 588999999887776654  555544 4789999999998778999999999998642210 


Q ss_pred             ccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCC-
Q psy8774         233 EWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPE-  311 (427)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~-  311 (427)
                      .+....                      ..+........++++|.+|.|++.|.|+|+|+|..|.|+.+. +.++|.+. 
T Consensus       509 ~~~~~~----------------------~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~~~  565 (731)
T 2v5y_A          509 EIDLSN----------------------QSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPAT-NQFTTKISA  565 (731)
T ss_dssp             --CCCC----------------------CEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEEE-EEEECCCCC
T ss_pred             cccccC----------------------cceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCcc-cEEEcCCCC
Confidence            000000                      000123345677999999999999999999999999999885 67777432 


Q ss_pred             -CCCcceE--EeecCCCeEEEEecCCCcCCC--ceEEEEEeheeecce----e---------------------------
Q psy8774         312 -DVPLSLR--AHDVSTHSMTLSWSPPIKLNP--VKYKEVSEKIQERRL----Q---------------------------  355 (427)
Q Consensus       312 -~~P~~l~--~~~~~~~~v~l~W~~P~~~~g--~~Y~i~~~~~~~~~l----~---------------------------  355 (427)
                       .+|..+.  ....+.+++.|+|++|...+|  .+|+|.+........    .                           
T Consensus       566 P~~p~~~~~~~~~~~~~si~l~W~pp~~~~g~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aa~~  645 (731)
T 2v5y_A          566 PSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEF  645 (731)
T ss_dssp             CCC-----------------------------------------------------------------------------
T ss_pred             CCCCCcccccccccCCceEEEEEeCCCCCCCceEEEEEEEEecCCCCCccccccccCcccccCHHHHhhcCCcceEEEEc
Confidence             2222222  234678899999999987776  399997663221100    0                           


Q ss_pred             --------------eeeeEEEEeecccccccceEEEEEeecccCCCCcchhhhHHHHHhhccC
Q psy8774         356 --------------KYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKKRWMDCVNQDLGEK  404 (427)
Q Consensus       356 --------------~~t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~~~~~~~~~~~~~~  404 (427)
                                    ....|.-+....|.+...|.|+|+|.+.+|.|. ...++...+.+++.+
T Consensus       646 ~p~~~~~~~~~~vg~~~~~~~~~n~~L~p~~~Y~i~v~A~s~~g~~~-~~~~v~~~t~~~~~~  707 (731)
T 2v5y_A          646 PADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGET-KIDCVQVATKGAATP  707 (731)
T ss_dssp             ---------------------------------------------------------------
T ss_pred             ChhhCcccCCEEECCCCeECCEECCCCCCCCceEEEEEEEEecCCCc-EeeeEEEeccccCCC
Confidence                          000111122234788889999999999999994 444666555544333

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}

Probab=100.00  E-value=4.2e-36  Score=301.28  Aligned_cols=350  Identities=18%  Similarity=0.217  Sum_probs=257.6

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe----ecCcceEEEcCCCCCceEEEEEEEEeccCcCccc-
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV----NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET-   77 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~-   77 (427)
                      .+.++++|.|+|++|...++.+.+|+|+|+..++..|....    ....+++.+.+|.|++.|.|+|+|.+..|.|..+ 
T Consensus       210 ~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~  289 (589)
T 3l5h_A          210 SEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSD  289 (589)
T ss_dssp             TTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCC
T ss_pred             cCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCC
Confidence            35678899999999986677889999999988877777653    3456899999999999999999999999887642 


Q ss_pred             ---ceEEeCCCCCCCCCCeeeEEE----eecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEc
Q psy8774          78 ---VRYYTTPEGPPTGPPANISHH----FQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS  150 (427)
Q Consensus        78 ---~~~~~t~~~~p~~~p~~~~~~----~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~  150 (427)
                         ...+.|.+.+|..+|..+...    ..+.+++.|+|+++...+.+|.+.+|.|.|+....  .........+.+.+ 
T Consensus       290 ~S~~~~~~T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~--~~~~~~~~~~~~~~-  366 (589)
T 3l5h_A          290 WSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKS--HLQNYTVNATKLTV-  366 (589)
T ss_dssp             CCCCBCCCCCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTS--CCCBCCCSSSCCEE-
T ss_pred             CCCccccccCccCCCCCCcEEEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCC--CceeeccCCceEEE-
Confidence               344677777787788766544    45678999999987667788999999999976632  22222333444444 


Q ss_pred             cCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccc
Q psy8774         151 NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVED  230 (427)
Q Consensus       151 ~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~  230 (427)
                       |.+++.|.|+|.|.|..|.|+.+..........+|.+|.++.+... ++++.|+|++|.   ..+.+|.|+|+......
T Consensus       367 -l~~~~~Y~~~V~A~n~~G~~~~s~~~~~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~---~~i~~Y~v~~~~~~~~~  441 (589)
T 3l5h_A          367 -NLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPK-DNMLWVEWTTPR---ESVKKYILEWCVLSDKA  441 (589)
T ss_dssp             -CCCSSCCCEEEEEEBTTBCCCCCCCCCCCTTCCCCSCCCSCEEEEC-SSSEEEECCCCS---SCCSCBCCEEEEECSSS
T ss_pred             -EeCCCCEEEEEEEEeCCccCCCeEEEeecccccCCCCcceEEEEEC-CCeEEEEEECCC---CCccEEEEEEEECCCCC
Confidence             8899999999999999999977754332222334567778888765 689999999987   47999999999874321


Q ss_pred             ccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec-
Q psy8774         231 LDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK-  309 (427)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~-  309 (427)
                      ...                           ..|..........+++.+|.|++.|.|+|+|++..|.|..+. +.+.|. 
T Consensus       442 ~~~---------------------------~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~~-~~~~t~~  493 (589)
T 3l5h_A          442 PCI---------------------------TDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPES-IKAYLKQ  493 (589)
T ss_dssp             CCC---------------------------EEECCBCSSCCEEECCSCCCSSSEEEEEECBEETTEECCCEE-EEEESSC
T ss_pred             CCc---------------------------cCcEEeeCCcceEEehhccccCcEEEEEEEEEeCCcccCCEE-EEEEecc
Confidence            110                           011223333455677899999999999999999999888764 455553 


Q ss_pred             -CCCCCcceEEeecCCCeEEEEecCC--CcCCCc--eEEEEEeheeecce--eeeeeEEEEeecccccccceEEEEEeec
Q psy8774         310 -PEDVPLSLRAHDVSTHSMTLSWSPP--IKLNPV--KYKEVSEKIQERRL--QKYGQYRYFETRDESYIGKRVERMEVRG  382 (427)
Q Consensus       310 -~~~~P~~l~~~~~~~~~v~l~W~~P--~~~~g~--~Y~i~~~~~~~~~l--~~~t~y~~~~~~~~~~~~~~~~~v~a~~  382 (427)
                       .+.+|.++.+...+.+++.|+|++|  ...+|.  +|+|.+........  .....-..+....|.+...|.|+|+|.|
T Consensus       494 ~~P~~pp~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n  573 (589)
T 3l5h_A          494 APPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYT  573 (589)
T ss_dssp             CCCSSCCCCCEECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCSSCCCCCEEECTTCCBCCBCSCCSSCCEECCEEEEE
T ss_pred             CCCCCCCeEEEeecccceEEEEecCCCHHHcCccceeEEEEEEeCCCCeEEEEeCCcccEEEecCCCCCCEEEEEEEEEe
Confidence             2233457888888999999999985  345664  99999764322211  1111222336778999999999999999


Q ss_pred             ccCCCCc
Q psy8774         383 RKGRGRP  389 (427)
Q Consensus       383 ~~g~g~p  389 (427)
                      .+| |.+
T Consensus       574 ~~G-~~~  579 (589)
T 3l5h_A          574 DEG-GKD  579 (589)
T ss_dssp             TTE-EEE
T ss_pred             CCC-CCC
Confidence            999 643

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=100.00  E-value=1.6e-31  Score=271.29  Aligned_cols=309  Identities=14%  Similarity=0.132  Sum_probs=218.3

Q ss_pred             cce---EEEEEeeCCCCCCCcceEeEEEEEEe-c------CccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcC
Q psy8774           6 PEV---TIELVWSQPTQTYGEILGYRVKYGVR-E------HTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYG   74 (427)
Q Consensus         6 ~~~---sv~l~W~~p~~~~~~i~~Y~v~~~~~-~------~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~   74 (427)
                      +++   +|.|+|++|.+.++++.+|.|+|+.. +      ...|.... ....++++|.+|.|++.|.|+|+|.|..|.|
T Consensus       281 ~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g  360 (680)
T 1zlg_A          281 NSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQT  360 (680)
T ss_pred             cCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcC
Confidence            556   99999999887789999999999832 1      11344433 4556899999999999999999999999988


Q ss_pred             cccc----eEEeCCCCCCCCCCeeeEEEeecCCEEEE-----------EeeCCCCCCCCcceeEEEEEEEEccCCC----
Q psy8774          75 QETV----RYYTTPEGPPTGPPANISHHFQTPDVVCI-----------TWDPPLRTHRNGQIVLYNVKFHKKIDAN----  135 (427)
Q Consensus        75 ~~~~----~~~~t~~~~p~~~p~~~~~~~~~~~~v~v-----------~W~~p~~~~~~~~i~~Y~v~~~~~~~~~----  135 (427)
                      +.+.    +.+.|...+|.  |.++.+...+.+++.|           +|.+|.  . ++.+.+|.|.|.......    
T Consensus       361 ~~S~~~~~v~~~T~~~~P~--p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~--~-~~~~~~y~v~w~~~~~~~v~~Y  435 (680)
T 1zlg_A          361 RLKSAKVSLHFTSTHATNN--KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPF--Y-QDGQLQVKVYWKKTEDPTVNRY  435 (680)
T ss_pred             CCCCCceeEEEECCCCCCC--ccccccccccCccccccccccCCCccccccCCc--c-cCCcceEEEEEeCCCCCccceE
Confidence            7543    56677766664  7788888888888877           999984  2 234568888887653221    


Q ss_pred             -----------------ceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcc----------------
Q psy8774         136 -----------------NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA----------------  182 (427)
Q Consensus       136 -----------------~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~----------------  182 (427)
                                       .........+++.|.+|.|++.|.|+|+|.|..|.+. +....+.+.                
T Consensus       436 ~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~-~~~~~f~T~~~~~~~~~~~~~v~~~  514 (680)
T 1zlg_A          436 HVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSK-AEAVFFTTPPCSALKGKSHKPIGCL  514 (680)
T ss_pred             EEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCC-ccccceeCCCccccccCCccccccC
Confidence                             1111234467899999999999999999999998653 112112211                


Q ss_pred             --c-----ccCCCCCc----eEEEeeeCcEEEEEeeeCCC-CCCceeEEEEEEEecccccccccccccccccccccceeE
Q psy8774         183 --R-----DMVRAPLG----VKALATSDQSVEVWWKPVPA-GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI  250 (427)
Q Consensus       183 --~-----~~p~~p~~----l~~~~~~~~si~v~W~~p~~-~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (427)
                        .     ..+.+|.+    +.+...+.+ +.|+|++|.. .+|.|.+|+|+|........... .....+..       
T Consensus       515 ~~~~P~~~~v~~~P~~l~~~v~v~~~~~t-i~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~~~~-~~~~~~~~-------  585 (680)
T 1zlg_A          515 GEAGHVLSKVLAKPENLSASFIVQDVNIT-GHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNS-LPNSIISQ-------  585 (680)
T ss_pred             CCCccccccccCCccccceeEEEeccCce-EEEEecCCCCCCCCCceeEEEEEEEccCCCcccc-ccceeeec-------
Confidence              0     11267788    666666666 9999999973 47899999999987532211000 00000000       


Q ss_pred             EeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec--CCCCCcceEEeecCCCeEE
Q psy8774         251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK--PEDVPLSLRAHDVSTHSMT  328 (427)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~--~~~~P~~l~~~~~~~~~v~  328 (427)
                                   .....+..++++|.+|.|++.|.|+|+|+|..|.|+. ..+.++|.  ++.+|..+++...+    .
T Consensus       586 -------------~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~~~T~~~~P~~P~~l~v~~~~----~  647 (680)
T 1zlg_A          586 -------------SQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKTFRTPELPPSSAHRSHLKHRH----P  647 (680)
T ss_pred             -------------ccccCCcccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceEEECCCCCCCCCCCCeEEecc----c
Confidence                         0112345789999999999999999999999999998 76788874  34456667776544    8


Q ss_pred             EEecCCCcCCCc---eEEEEEe
Q psy8774         329 LSWSPPIKLNPV---KYKEVSE  347 (427)
Q Consensus       329 l~W~~P~~~~g~---~Y~i~~~  347 (427)
                      |+|++|...+|.   +|.+.+.
T Consensus       648 l~W~pP~~~~G~~I~~~~~~~~  669 (680)
T 1zlg_A          648 HHYKPSPERYGKPIPNPLLGLD  669 (680)
T ss_pred             eeECCCCCCCCCccceeeEEEe
Confidence            999999998883   5665543

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A

Probab=100.00  E-value=3.2e-32  Score=248.36  Aligned_cols=262  Identities=20%  Similarity=0.262  Sum_probs=204.2

Q ss_pred             CccceEEEEEeeCCC--CCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEE
Q psy8774           4 EEPEVTIELVWSQPT--QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYY   81 (427)
Q Consensus         4 ~~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~   81 (427)
                      ..+.++|.|+|+++.  +.++.+.+|.|+|+..+.... .. ..  ..+.+++|.|++.|.|+|.|.|..|.+..+....
T Consensus        19 ~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~-~~-~~--~~~~~~~l~p~t~Y~~~V~A~n~~G~s~~s~~~~   94 (290)
T 3l5i_A           19 TQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ-NY-TV--NATKLTVNLTNDRYLATLTVRNLVGKSDAAVLTI   94 (290)
T ss_dssp             STTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCE-EE-EE--SSSEEEEEECSSCEEEEEEEEESSCBCCCEEEEE
T ss_pred             cCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcCce-eE-ec--CCcEEEEEcCCceEEEEEEEEcCCCCCCCceEEe
Confidence            456799999999854  668899999999997665432 11 22  3345688999999999999999999998776555


Q ss_pred             eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc----eEEEe-eeeeEEEEccCCCCc
Q psy8774          82 TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN----VIHRN-TTQTKAVFSNLEEGI  156 (427)
Q Consensus        82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~----~~~~~-~~~~~~~i~~L~p~t  156 (427)
                      .+....++.+|.++.+...+ +++.|+|+++.     +.+.+|.|+|+.......    +.... .....+.+.+|.|++
T Consensus        95 ~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~-----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t  168 (290)
T 3l5i_A           95 PACDFQATHPVMDLKAFPKD-NMLWVEWTTPR-----ESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESK  168 (290)
T ss_dssp             CCTTCCCCCCCEEEEEEEET-TEEEEEEECCS-----SCCCEEEEEEEEECSSSCCCCEEEEEETTCSEEECCSCCCTTC
T ss_pred             ecccccCCCccceeEEEeCC-CeEEEEEeCCC-----CCCCcEEEEEEECCCCCCCCcCeEEccCCCcceEEecCcCCcc
Confidence            55433566778888887765 69999999984     278899999998744321    22222 346778889999999


Q ss_pred             EEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCC--CCCCceeEEEEEEEeccccccccc
Q psy8774         157 EYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVP--AGRGKILGYQIFYTMTAVEDLDEW  234 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~--~~~g~i~~Y~I~~~~~~~~~~~~~  234 (427)
                      .|.|+|+|.|..|.|. +..+.+.+...+|..|.++.+...+.+++.|+|+++.  ..+|.+.+|.|+|+..+..   ..
T Consensus       169 ~Y~~~V~A~n~~g~g~-~~~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~---~~  244 (290)
T 3l5i_A          169 CYLITVTPVYADGPGS-PESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN---ET  244 (290)
T ss_dssp             EEEEEEEEEETTEECC-CEEEEEESSCCCCSSCCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSC---CE
T ss_pred             EEEEEEEEEeCCcccc-cEEEEeEccccCCCCCCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCC---eE
Confidence            9999999999999986 5566677777777666688898899999999999553  3468999999999986321   11


Q ss_pred             ccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         235 SQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                                                   ........++++|.+|.+++.|.|+|+|.|..| |+.|..+.++|.
T Consensus       245 -----------------------------~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~  289 (290)
T 3l5i_A          245 -----------------------------AVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTP  289 (290)
T ss_dssp             -----------------------------EEEEETTCSEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEECC
T ss_pred             -----------------------------EEEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeecC
Confidence                                         122356678999999999999999999999999 889998999884

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A

Probab=100.00  E-value=4.9e-31  Score=240.50  Aligned_cols=252  Identities=20%  Similarity=0.276  Sum_probs=200.2

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecC-ccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREH-TLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRY   80 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~   80 (427)
                      ..+++++|.|+|+++   ++.+.+|.|+|+..+. ..|.... ....+++.+.+|.|++.|.|+|+|.+..|.+..+...
T Consensus        30 ~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~  106 (290)
T 3r8q_A           30 TQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGV  106 (290)
T ss_dssp             EEECSSCEEEEEECC---SSCCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEE
T ss_pred             EECCCCEEEEEEeCC---CCCeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCCCCCCccee
Confidence            356789999999998   5688999999998763 3454443 6678899999999999999999999999999877766


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE-EEeeeeeEEEEccCCCCcEEE
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI-HRNTTQTKAVFSNLEEGIEYS  159 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~  159 (427)
                      +.+...+  .+|.++.+...+.+++.|+|+++.     +.+.+|.|+|+......... ......+++.|.+|.|++.|.
T Consensus       107 ~~t~~~~--~~P~~l~~~~~~~~sv~l~W~~p~-----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~  179 (290)
T 3r8q_A          107 VTTLENV--SPPRRARVTDATETTITISWRTKT-----ETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYK  179 (290)
T ss_dssp             EECCCCC--CCCEEEEEEEECSSCEEEEEECCS-----CCCCEEEEEEEESSSCCCEEEEECTTCSEEEECSCCTTCEEE
T ss_pred             EecCCCC--CCCceeEEEEcCCCeEEEEEeCCC-----CcccEEEEEEEECCCCcceEEecCCCccEEEECCCCCCCEEE
Confidence            7765543  478999999999999999999873     57899999999874333222 233457899999999999999


Q ss_pred             EEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccc
Q psy8774         160 AEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI  239 (427)
Q Consensus       160 ~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~  239 (427)
                      |+|+|.|..|.|... .+.+.+   .|.+|.++.+...+.+++.|+|++|.   +.+.+|.|+|+..+.... ..     
T Consensus       180 ~~V~A~n~~g~s~~~-~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~~-~~-----  246 (290)
T 3r8q_A          180 IYLYTLNDNARSSPV-VIDAST---AIDAPSNLRFLATTPNSLLVSWQPPR---ARITGYIIKYEKPGSPPR-EV-----  246 (290)
T ss_dssp             EEEEEEETTEECCCE-EEEEEC---CCCCCEEEEEEEEETTEEEEEEECCS---SCCCEEEEEEECTTSCCE-EC-----
T ss_pred             EEEEEEeCCcccCCE-EEEecC---CCCCCCccEEEeeCCCEEEEEEeCCC---CcccEEEEEEEeCCCCcc-ee-----
Confidence            999999988876432 223333   36788999999999999999999987   689999999987632111 11     


Q ss_pred             cccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCc
Q psy8774         240 PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS  301 (427)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s  301 (427)
                                              ........++++|.+|.|++.|.|+|+|++..|.|...
T Consensus       247 ------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~  284 (290)
T 3r8q_A          247 ------------------------VPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPL  284 (290)
T ss_dssp             ------------------------SSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred             ------------------------EeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCcc
Confidence                                    11233567799999999999999999999999887654

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*

Probab=100.00  E-value=2.1e-32  Score=261.97  Aligned_cols=345  Identities=13%  Similarity=0.129  Sum_probs=177.9

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe---ecCcceEEE--cCCCCCceEEEEEEEEeccCcCcccc-eE
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV---NSKNMSFLI--TNLERGVEYEFRIAGQNHIGYGQETV-RY   80 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~--~~L~p~t~Y~~~V~a~~~~g~~~~~~-~~   80 (427)
                      ..++.|+|+++.+.++++. |.|+|+..+...|....   ....+.+.+  .+|.+++.|.|+|+|.| .+.+..+. ..
T Consensus        20 ~~~~~L~W~p~~~~~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~A~n-~~~S~~s~~~~   97 (414)
T 3se4_A           20 DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDS   97 (414)
T ss_dssp             TTEEEEC----------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEEEEE-TTEEEEEECCC
T ss_pred             CCceEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEEEee-CCcCCCEecCc
Confidence            3568899999987667777 99999987666786431   333444444  56899999999999999 55554322 11


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCC-----CCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCC
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTH-----RNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEG  155 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~-----~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~  155 (427)
                      +.+....+.+||. +.+... .++|.|+|. |....     .++.+.+|.|.|+..+.... ........++.|.+|.|+
T Consensus        98 ~~~~~~~~~~pP~-v~~~~~-~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~-~~~~~~~~~~~i~~L~p~  173 (414)
T 3se4_A           98 FTPFRKAQIGPPE-VHLEAE-DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVE-ERIENIYSRHKIYKLSPE  173 (414)
T ss_dssp             BCHHHHCCCCCCE-EEEEEC-SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCE-EEEEEECSEEEECCCCTT
T ss_pred             eeecccceeCCCe-EEEEEc-CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCce-EEEecCCcEEEEcCCCCC
Confidence            2121223445664 776654 468999999 64221     13567899999998744332 334456788999999999


Q ss_pred             cEEEEEEEEeeC--CCCCCCCCCeEEEcccc-cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecc-----
Q psy8774         156 IEYSAEVQAITK--AGPGPWSPKLSLMTARD-MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTA-----  227 (427)
Q Consensus       156 t~Y~~~V~a~~~--~g~~~~s~~~~~~t~~~-~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~-----  227 (427)
                      +.|.|+|+|.|.  .|.|..|....+.+..+ ++.+|.++.+...+ +++.|+|++|.   + ..+|.|+|+...     
T Consensus       174 t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~~-~~~~l~W~pp~---~-~~~Y~v~y~~~~~~~~~  248 (414)
T 3se4_A          174 TTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN-QNYVLKWDYTY---A-NMTFQVQWLHAFLKRNP  248 (414)
T ss_dssp             CEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEECSS---S-SCEEEEEEEESGGGSCC
T ss_pred             CeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEec-CCeEEEECCCC---C-CeEEEEEEEehhccccc
Confidence            999999999994  67788888888888654 44789999988764 67999999975   2 349999998730     


Q ss_pred             cccccccccccccccccccceeEEeeeccccccccccccccCCCCceecc-CCCCCCeEEEEEEEEeccCCCCCccceEE
Q psy8774         228 VEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELT-SLEKFTEYAVAVAARTVNGLGRLSGKVTV  306 (427)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~  306 (427)
                      ......|...                          ........+++.|. +|.+++.|.|+|+|.|..|.|++|....+
T Consensus       249 ~~~~~~w~~~--------------------------~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~  302 (414)
T 3se4_A          249 GNHLYKWKQI--------------------------PDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKF  302 (414)
T ss_dssp             CC--CCCCBC--------------------------STTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEE
T ss_pred             cccccCceEC--------------------------CCccCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccccc
Confidence            0011223100                          00111234555665 69999999999999999999999988888


Q ss_pred             eec---CCCCCcceEEeecCCCeEEEEecCCCcCCC--------ceEEEEEeheeec-ceeeeeeEEEEeecccccccce
Q psy8774         307 KVK---PEDVPLSLRAHDVSTHSMTLSWSPPIKLNP--------VKYKEVSEKIQER-RLQKYGQYRYFETRDESYIGKR  374 (427)
Q Consensus       307 ~t~---~~~~P~~l~~~~~~~~~v~l~W~~P~~~~g--------~~Y~i~~~~~~~~-~l~~~t~y~~~~~~~~~~~~~~  374 (427)
                      .|.   +.+||. |++.. ..+++.|+|++|..+++        ++|+|.+.+-... ..........+....|++...|
T Consensus       303 ~t~~~~~~~pP~-l~~~~-~~~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y  380 (414)
T 3se4_A          303 DTEIQAFLLPPV-FNIRS-LSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVY  380 (414)
T ss_dssp             ETTCC---------------------------------------------------------------------------
T ss_pred             cchhccccCCCe-EEEEE-CCCeEEEEEECCCCccccchhhcCCeEEEEEEEECCCCceEEEEecCCeEEeCCCCCCCeE
Confidence            764   345666 77774 45899999999987653        3787765322111 1111123344577889999999


Q ss_pred             EEEEEeecc----cCCCCcc
Q psy8774         375 VERMEVRGR----KGRGRPK  390 (427)
Q Consensus       375 ~~~v~a~~~----~g~g~p~  390 (427)
                      .|+|+|.+.    +|.|+..
T Consensus       381 ~~~V~A~~~~~~~~g~g~~S  400 (414)
T 3se4_A          381 CVKARAHTMDEKLNKSSVFS  400 (414)
T ss_dssp             --------------------
T ss_pred             EEEEEEEecccccCCCCCCC
Confidence            999999983    5777643

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}

Probab=100.00  E-value=1.7e-32  Score=275.01  Aligned_cols=342  Identities=17%  Similarity=0.217  Sum_probs=247.6

Q ss_pred             cceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEc-CCCCCceEEEEEEEEeccCcCcccceEEeC
Q psy8774           6 PEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLIT-NLERGVEYEFRIAGQNHIGYGQETVRYYTT   83 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~-~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t   83 (427)
                      ...++.++|+++.+. +.+..|.|+|+..++....... .....++.+. +|.+++.|.|+|.|.|..|.+......+.+
T Consensus       115 ~~~~~~~~W~~~~~~-~~~~~y~l~~~~~~~~~~~c~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~  193 (589)
T 3l5h_A          115 EGKKMRCEWDGGRET-HLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDP  193 (589)
T ss_dssp             TTSCEEEEEECCSCC-SSCEEEEECCBCSSSBCCCEECBTTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECG
T ss_pred             CCceEEEEECCCCcC-CcCceEEEEEEEcCCCcccCCCCCCCcEEEEECCCCchheeEEEEEEEEeCCCCcccccEEEcc
Confidence            457899999998643 4678999998765543333332 3345677777 799999999999999999987555555555


Q ss_pred             CCCCCCCCCeeeEEE--eecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-----eeeeeEEEEccCCCCc
Q psy8774          84 PEGPPTGPPANISHH--FQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-----NTTQTKAVFSNLEEGI  156 (427)
Q Consensus        84 ~~~~p~~~p~~~~~~--~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~~~~~~~~i~~L~p~t  156 (427)
                      ....++.+|.++.+.  ..+.+++.|+|++|.  ..++.+.+|.|+|+..+. ..+...     ....+++.+.+|.|++
T Consensus       194 ~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~--~~~~~~~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~i~~L~p~t  270 (589)
T 3l5h_A          194 VYKVKPNPPHNLSVINSEELSSILKLTWTNPS--IKSVIILKYNIQYRTKDA-STWSQIPPEDTASTRSSFTVQDLKPFT  270 (589)
T ss_dssp             GGSEECCCCCSCEEECTTTCTTCEEEECCCCG--GGGTSCEEEEEEEEETTC-SCCBCCCTTSSCSCCSEEEECSCCSSC
T ss_pred             ccEEEcCCCceEEEEecCCCCCeEEEEeCCCC--CCCeeeEEEEEEECCCCC-CCcEEEccccCcCceeEEEECCCCCCC
Confidence            555566788899884  467889999999984  445688999999998742 233322     1346889999999999


Q ss_pred             EEEEEEEEeeCCCCCCC---CCCeEEEcccccC-CCCCceEEE----eeeCcEEEEEeeeCC--CCCCceeEEEEEEEec
Q psy8774         157 EYSAEVQAITKAGPGPW---SPKLSLMTARDMV-RAPLGVKAL----ATSDQSVEVWWKPVP--AGRGKILGYQIFYTMT  226 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~---s~~~~~~t~~~~p-~~p~~l~~~----~~~~~si~v~W~~p~--~~~g~i~~Y~I~~~~~  226 (427)
                      .|.|+|+|.+..|.|.+   |..+.+.|..+.| .+|..+...    ..+.+++.|.|+++.  ..+|.+.+|+|.|+..
T Consensus       271 ~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~  350 (589)
T 3l5h_A          271 EYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRW  350 (589)
T ss_dssp             CEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCT
T ss_pred             EEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecC
Confidence            99999999999888655   6777778877666 567655543    346789999999743  3578999999998765


Q ss_pred             ccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEE
Q psy8774         227 AVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV  306 (427)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~  306 (427)
                      ..    .+                             . ......+.++  .|.+++.|.|+|+|.|..|.|+.+.. .+
T Consensus       351 ~~----~~-----------------------------~-~~~~~~~~~~--~l~~~~~Y~~~V~A~n~~G~~~~s~~-~~  393 (589)
T 3l5h_A          351 KS----HL-----------------------------Q-NYTVNATKLT--VNLTNDRYLATLTVRNLVGKSDAAVL-TI  393 (589)
T ss_dssp             TS----CC-----------------------------C-BCCCSSSCCE--ECCCSSCCCEEEEEEBTTBCCCCCCC-CC
T ss_pred             CC----Cc-----------------------------e-eeccCCceEE--EEeCCCCEEEEEEEEeCCccCCCeEE-Ee
Confidence            22    11                             1 0112223333  48899999999999999999998864 33


Q ss_pred             eec---CCCCCcceEEeecCCCeEEEEecCCCcCCCceEEEEEeheeecc---e----eeeeeEEEEeecccccccceEE
Q psy8774         307 KVK---PEDVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSEKIQERR---L----QKYGQYRYFETRDESYIGKRVE  376 (427)
Q Consensus       307 ~t~---~~~~P~~l~~~~~~~~~v~l~W~~P~~~~g~~Y~i~~~~~~~~~---l----~~~t~y~~~~~~~~~~~~~~~~  376 (427)
                      .+.   ++.||.++.+... ++++.|+|++|.. ...+|.|++.......   .    .....-..+....|.+...|.|
T Consensus       394 ~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~  471 (589)
T 3l5h_A          394 PACDFQATHPVMDLKAFPK-DNMLWVEWTTPRE-SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLI  471 (589)
T ss_dssp             CCTTCCCCSCCCSCEEEEC-SSSEEEECCCCSS-CCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSCCCSSSEEEE
T ss_pred             ecccccCCCCcceEEEEEC-CCeEEEEEECCCC-CccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhccccCcEEEE
Confidence            332   3445567887754 6899999999975 4458998877443211   1    1111122335678999999999


Q ss_pred             EEEeecccCCCCcc
Q psy8774         377 RMEVRGRKGRGRPK  390 (427)
Q Consensus       377 ~v~a~~~~g~g~p~  390 (427)
                      +|+|.+..|.|.+.
T Consensus       472 ~V~A~~~~g~g~~~  485 (589)
T 3l5h_A          472 TVTPVYADGPGSPE  485 (589)
T ss_dssp             EECBEETTEECCCE
T ss_pred             EEEEEeCCcccCCE
Confidence            99999999999985

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1

Probab=100.00  E-value=1.5e-30  Score=236.38  Aligned_cols=249  Identities=18%  Similarity=0.262  Sum_probs=195.9

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecC-ccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREH-TLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRY   80 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~   80 (427)
                      ..+++++|.|+|+++.   +.+.+|.|+|+.... ..|.... ....+++.+.+|.|++.|.|+|+|.+..|.+......
T Consensus        24 ~~~~~~sv~l~W~~~~---~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~  100 (283)
T 1tdq_A           24 RDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESDASSTQ  100 (283)
T ss_dssp             EEECSSCEEEEEECCS---SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEE
T ss_pred             EecCCCeEEEEEECCC---CceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEE
Confidence            3467789999999985   678999999976543 2343333 6778999999999999999999999998888765555


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc-eEEEeee---eeEEEEccCCCCc
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN-VIHRNTT---QTKAVFSNLEEGI  156 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~-~~~~~~~---~~~~~i~~L~p~t  156 (427)
                      +.+    ++.+|.++++...+.+++.|+|+++.     +.+.+|.|+|+..++... .......   .+++.|.+|.|++
T Consensus       101 ~~t----~p~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t  171 (283)
T 1tdq_A          101 FTT----EIDAPKNLRVGSRTATSLDLEWDNSE-----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGT  171 (283)
T ss_dssp             EEC----CCCCCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTC
T ss_pred             EEC----CCCCCCceEEEecCCCeEEEEecCCC-----CCccEEEEEEEeCCCCcceEEECCCCCcccceEEEecCCCCC
Confidence            555    34568899999999999999999984     578999999988743332 2223344   7899999999999


Q ss_pred             EEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccccccc
Q psy8774         157 EYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQ  236 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~  236 (427)
                      .|.|+|+|.|..|.|.   ...+.+.. .|.+|.++.+...+.+++.|+|++|.   +.+.+|.|+|...++.   ..  
T Consensus       172 ~Y~~~V~A~n~~g~s~---~~~~~~~t-~~~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~---~~--  239 (283)
T 1tdq_A          172 EYGVGISAVMNSKQSI---PATMNART-ELDSPRDLMVTASSETSISLIWTKAS---GPIDHYRITFTPSSGI---SS--  239 (283)
T ss_dssp             EEEEEEEEEETTEECC---CEEEEEEC-CCCCCEEEEEEEECSSCEEEEEECCC---SCCSEEEEEEECSSSC---CE--
T ss_pred             EEEEEEEEEeCCCCCc---ceEEEecC-CCCCCCccEEeEecCCEEEEEEeCCC---CcccEEEEEEEcCCCC---ee--
Confidence            9999999999887653   33333332 34578899999999999999999875   7899999999876321   11  


Q ss_pred             ccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         237 KSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                                                 ........++++|.+|.|++.|.|+|+|.+..|.|..+.
T Consensus       240 ---------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~  278 (283)
T 1tdq_A          240 ---------------------------EVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLEST  278 (283)
T ss_dssp             ---------------------------EEEEESSCSEEEECCCCTTCCEEEEEEEEETTEECCCEE
T ss_pred             ---------------------------EEEeCCCccEEEECCCCCCCEEEEEEEEEcCCCCCccee
Confidence                                       122345677899999999999999999999998887665

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A

Probab=99.98  E-value=4.3e-30  Score=234.25  Aligned_cols=263  Identities=17%  Similarity=0.213  Sum_probs=203.2

Q ss_pred             CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEE
Q psy8774          85 EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        85 ~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      ...++.+|.++.+...+.+++.|+|+++.     +.+.+|.|+|+.......+....  ...+++.|.+|.|++.|.|+|
T Consensus        17 ~~~~p~~P~~l~~~~~~~~sv~l~W~~p~-----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   91 (290)
T 3r8q_A           17 QGPAIPAPTDLKFTQVTPTSLSAQWTPPN-----VQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSV   91 (290)
T ss_dssp             ---CCCCCEEEEEEEECSSCEEEEEECCS-----SCCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEE
T ss_pred             eCCCCCCCCceEEEECCCCEEEEEEeCCC-----CCeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEE
Confidence            34466789999999999999999999983     67899999999875444443333  447899999999999999999


Q ss_pred             EEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccccccccccccc
Q psy8774         163 QAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLT  242 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~  242 (427)
                      +|.+..|.|..+ ...+.+...+ .+|.++.+...+.+++.|+|++|.   +.+.+|.|+|+..+...  ..        
T Consensus        92 ~a~~~~g~s~~s-~~~~~t~~~~-~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~--~~--------  156 (290)
T 3r8q_A           92 YALKDTLTSRPA-QGVVTTLENV-SPPRRARVTDATETTITISWRTKT---ETITGFQVDAVPANGQT--PI--------  156 (290)
T ss_dssp             EEEETTEECCCE-EEEEECCCCC-CCCEEEEEEEECSSCEEEEEECCS---CCCCEEEEEEEESSSCC--CE--------
T ss_pred             EEEeCCCCCCCc-ceeEecCCCC-CCCceeEEEEcCCCeEEEEEeCCC---CcccEEEEEEEECCCCc--ce--------
Confidence            999999988666 4455554444 789999999999999999999985   78999999998763211  11        


Q ss_pred             ccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCcceEEeec
Q psy8774         243 ESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDV  322 (427)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~~l~~~~~  322 (427)
                                           ........++++|.+|.|++.|.|+|+|++..|.|.... +.+.| .+.+|.+|++...
T Consensus       157 ---------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~-~~~~t-~p~~P~~l~~~~~  213 (290)
T 3r8q_A          157 ---------------------QRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVV-IDAST-AIDAPSNLRFLAT  213 (290)
T ss_dssp             ---------------------EEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC-CCCCCEEEEEEEE
T ss_pred             ---------------------EEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCEE-EEecC-CCCCCCccEEEee
Confidence                                 122345677899999999999999999999998876543 44455 4567889999989


Q ss_pred             CCCeEEEEecCCCcCCCceEEEEEeheeeccee----eeeeEEEEeecccccccceEEEEEeecccCCCCcch
Q psy8774         323 STHSMTLSWSPPIKLNPVKYKEVSEKIQERRLQ----KYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKK  391 (427)
Q Consensus       323 ~~~~v~l~W~~P~~~~g~~Y~i~~~~~~~~~l~----~~t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~  391 (427)
                      +.+++.|+|++|. ....+|.|.+.........    ..+.-..+....|.+...|.|+|+|.+..|.|+|..
T Consensus       214 ~~~sv~l~W~~p~-~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~  285 (290)
T 3r8q_A          214 TPNSLLVSWQPPR-ARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLI  285 (290)
T ss_dssp             ETTEEEEEEECCS-SCCCEEEEEEECTTSCCEECSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             CCCEEEEEEeCCC-CcccEEEEEEEeCCCCcceeEeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCccc
Confidence            9999999999987 2345999998743222111    011122346788999999999999999999999965

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A

Probab=99.98  E-value=1e-29  Score=239.82  Aligned_cols=252  Identities=17%  Similarity=0.239  Sum_probs=199.2

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCc-cceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHT-LKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRY   80 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~   80 (427)
                      ...++++|.|+|+++.  ++.+.+|.|+|+..++. .|.... ....+++.+.+|.|++.|.|+|+|.+..|.+......
T Consensus       104 ~~~~~~si~l~W~~p~--~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~  181 (368)
T 1fnf_A          104 TNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR  181 (368)
T ss_dssp             ESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEE
T ss_pred             EEcCCCeEEEEeeCCC--CCCCcEEEEEEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeEee
Confidence            4567899999999985  46889999999976654 344433 5678899999999999999999999999988665444


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEccCCCCcEE
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSNLEEGIEY  158 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~t~Y  158 (427)
                      ..+    ++.+|.++.+...+.+++.|+|+++.     +.+.+|.|+|+.........  ......+++.+.+|.|++.|
T Consensus       182 ~~~----~~~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y  252 (368)
T 1fnf_A          182 QKT----GLDSPTGIDFSDITANSFTVHWIAPR-----ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEY  252 (368)
T ss_dssp             EEC----CCCCCEEEEEESCCSSEEEEEEECCS-----SCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEE
T ss_pred             ecC----CCCCCCccEEEEccCCEEEEEEeCCC-----CCcCEEEEEEecCCCCCCccEEEeCCCcCEEEECCCCCCCEE
Confidence            444    33468899999889999999999873     57899999998764322222  23345789999999999999


Q ss_pred             EEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccccccccc
Q psy8774         159 SAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKS  238 (427)
Q Consensus       159 ~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~  238 (427)
                      .|+|+|.|..|.|..+.    .+...+|.+|.++.+...+.+++.|+|++|.   +.+.+|.|+|+..+......     
T Consensus       253 ~~~V~A~n~~g~~~~~~----~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~-----  320 (368)
T 1fnf_A          253 VVSIVALNGREESPLLI----GQQSTVSDVPRDLEVVAATPTSLLISWDAPA---VTVRYYRITYGETGGNSPVQ-----  320 (368)
T ss_dssp             EEEEEEEETTEECCCEE----EEEECCCCSCEEEEEEEEETTEEEEEEECCS---SCCSEEEEEEEETTCCSCCE-----
T ss_pred             EEEEEEEeCCccCCccc----ccccCCCCCCCeeEEEecCCCEEEEEeeCCC---CccceEEEEEEECCCCCccE-----
Confidence            99999999998875432    2234467888999999999999999999987   46899999998763221111     


Q ss_pred             ccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         239 IPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                                               ........+++++.+|.|++.|.|+|+|++..|.|+++.
T Consensus       321 -------------------------~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~s~  359 (368)
T 1fnf_A          321 -------------------------EFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPASS  359 (368)
T ss_dssp             -------------------------EEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCCBC
T ss_pred             -------------------------EEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcccC
Confidence                                     112345677999999999999999999999999998875

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B

Probab=99.97  E-value=2.4e-29  Score=237.87  Aligned_cols=253  Identities=21%  Similarity=0.304  Sum_probs=201.8

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccc-ee-EeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLK-EN-LVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRY   80 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~-~~-~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~   80 (427)
                      ...++++|.|+|+++.  ++.+.+|+|+|+..+.... .. ......+++.+.+|.|++.|.|+|+|.+..|.|..+...
T Consensus       105 ~~~~~~si~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~  182 (375)
T 3t1w_A          105 VDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLT  182 (375)
T ss_dssp             ECCCSSEEEEECCCCC--CTTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEE
T ss_pred             EecCCCeEEEEEECCC--CCCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeee
Confidence            3567899999999985  5689999999997665432 22 226678899999999999999999999999999877776


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEE
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEY  158 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y  158 (427)
                      ..+   .+ .+|.++.+...+.+++.|+|+++.    ++.+.+|.|+|+..+....+....  ...+++.+.+|.|++.|
T Consensus       183 ~~t---~~-~~p~~l~~~~~~~~si~l~W~~p~----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y  254 (375)
T 3t1w_A          183 QQT---AV-PPPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEY  254 (375)
T ss_dssp             EEC---CC-CCCEEEEEESCCSSCEEEEEECCS----SCCCCEEEEEEEEGGGTTCCEEEEECTTCCEEEECSCCTTCEE
T ss_pred             eec---CC-CCCceeEEEecccCEEEEEEcCCC----CCCccEEEEEEEeCCCCCCcEEEEcCCCcCEEEeCCCCCCCEE
Confidence            666   22 268899999889999999999973    267889999999875444443333  44689999999999999


Q ss_pred             EEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccccccccc
Q psy8774         159 SAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKS  238 (427)
Q Consensus       159 ~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~  238 (427)
                      .|+|+|.+..|.|..+ ...+.+   +|.+|.++.+...+.+++.|+|++|.   +.+.+|.|+|+..+.... ..    
T Consensus       255 ~~~V~A~~~~g~s~~~-~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~~-~~----  322 (375)
T 3t1w_A          255 VVSVSSVYEQHESTPL-RGRQKT---GLDSPTGIDFSDITANSFTVHWIAPR---ATITGYRIRHHPEHFSGR-PR----  322 (375)
T ss_dssp             EEEEEEEETTEECCCE-EEEEEC---CCCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEETTCCSS-CE----
T ss_pred             EEEEEEEcCCCcCCce-eeEEec---CCCCCCccEeeeccCCEEEEEECCCC---cceeeEEEEEEECCCCCc-ce----
Confidence            9999999998887433 233333   56789999999899999999999986   789999999998743111 11    


Q ss_pred             ccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         239 IPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                                               ........++++|.+|.|++.|.|+|+|.+..|.|+...
T Consensus       323 -------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s  361 (375)
T 3t1w_A          323 -------------------------EDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI  361 (375)
T ss_dssp             -------------------------EEEEETTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             -------------------------eEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCCCcee
Confidence                                     123345677999999999999999999999999988765

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1

Probab=99.97  E-value=2.6e-28  Score=221.54  Aligned_cols=258  Identities=15%  Similarity=0.182  Sum_probs=194.9

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--EeeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      ++.+|.++.+...+.+++.|+|+++.     +.+.+|.|+|+.......+..  .....+++.|.+|.|++.|.|+|+|.
T Consensus        14 ~p~~P~~l~~~~~~~~sv~l~W~~~~-----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~   88 (283)
T 1tdq_A           14 VIDGPTQILVRDVSDTVAFVEWTPPR-----AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAV   88 (283)
T ss_dssp             SSCCCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCCCcEEEEEecCCCeEEEEEECCC-----CceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEEEEEEE
Confidence            55679999999999999999999984     578899999976533333322  23458899999999999999999999


Q ss_pred             eCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccc
Q psy8774         166 TKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS  245 (427)
Q Consensus       166 ~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~  245 (427)
                      |..|.+. +....+.+   +|.+|.++++...+.+++.|+|++|.   +.+.+|.|+|+..++.....            
T Consensus        89 ~~~g~s~-~~~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~------------  149 (283)
T 1tdq_A           89 RGTNESD-ASSTQFTT---EIDAPKNLRVGSRTATSLDLEWDNSE---AEAQEYKVVYSTLAGEQYHE------------  149 (283)
T ss_dssp             ETTEECC-CEEEEEEC---CCCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEETTCCCCEE------------
T ss_pred             CCCCCCC-CeeEEEEC---CCCCCCceEEEecCCCeEEEEecCCC---CCccEEEEEEEeCCCCcceE------------
Confidence            9887763 22333333   56789999999999999999999987   78999999998763321100            


Q ss_pred             cceeEEeeeccccccccccccccCC---CCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCcceEEeec
Q psy8774         246 NIARIFYTMTAVEDLDEWSQKSVPL---TESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDV  322 (427)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~~l~~~~~  322 (427)
                                         ......   .++++|.+|.|++.|.|+|+|+|..|.|.... +.+.+ .+.+|.+|++...
T Consensus       150 -------------------~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~-~~~~t-~~~~P~~l~~~~~  208 (283)
T 1tdq_A          150 -------------------VLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPAT-MNART-ELDSPRDLMVTAS  208 (283)
T ss_dssp             -------------------EEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC-CCCCCEEEEEEEE
T ss_pred             -------------------EECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcceE-EEecC-CCCCCCccEEeEe
Confidence                               112222   67899999999999999999999988765543 44445 4457889999988


Q ss_pred             CCCeEEEEecCCCcCCCceEEEEEeheeecc--eeeeeeEEEEeecccccccceEEEEEeecccCCCCcch
Q psy8774         323 STHSMTLSWSPPIKLNPVKYKEVSEKIQERR--LQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKK  391 (427)
Q Consensus       323 ~~~~v~l~W~~P~~~~g~~Y~i~~~~~~~~~--l~~~t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~  391 (427)
                      +.+++.|+|++|. ....+|+|.+.......  ......-..+....|.+...|.|+|+|.+..|.|+|..
T Consensus       209 ~~~sv~l~W~~p~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~  278 (283)
T 1tdq_A          209 SETSISLIWTKAS-GPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLEST  278 (283)
T ss_dssp             CSSCEEEEEECCC-SCCSEEEEEEECSSSCCEEEEEESSCSEEEECCCCTTCCEEEEEEEEETTEECCCEE
T ss_pred             cCCEEEEEEeCCC-CcccEEEEEEEcCCCCeeEEEeCCCccEEEECCCCCCCEEEEEEEEEcCCCCCccee
Confidence            9999999999974 33359999886432211  11111112336677999999999999999999999864

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=99.97  E-value=6.6e-31  Score=273.80  Aligned_cols=278  Identities=18%  Similarity=0.249  Sum_probs=214.5

Q ss_pred             CCccceEEEEEeeCCCC-CCCcceEeEEEEEEe--------------cCccceeEe---ec--------CcceEEEcCCC
Q psy8774           3 KEEPEVTIELVWSQPTQ-TYGEILGYRVKYGVR--------------EHTLKENLV---NS--------KNMSFLITNLE   56 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~-~~~~i~~Y~v~~~~~--------------~~~~~~~~~---~~--------~~~~~~~~~L~   56 (427)
                      ..+++++|.|+|++|.. .++++.+|.|+|+..              +...|....   ..        ..+++.+.+|.
T Consensus       478 ~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~L~  557 (897)
T 2dtg_E          478 IRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLK  557 (897)
T ss_dssp             EEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEECSCC
T ss_pred             EEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccceEeCCCC
Confidence            45688999999999873 456899999999865              223565432   11        25889999999


Q ss_pred             CCceEEEEEEE-EeccCc----Cccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEE
Q psy8774          57 RGVEYEFRIAG-QNHIGY----GQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHK  130 (427)
Q Consensus        57 p~t~Y~~~V~a-~~~~g~----~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~  130 (427)
                      |++.|.|+|+| .+..|.    +..+ ...+.|...+| .+|.++.+...++++|.|+|++|  ...+|.+.+|.|+|+.
T Consensus       558 P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~P-s~P~~l~~~~~s~tsI~LsW~pP--~~~nG~I~~Y~V~~~~  634 (897)
T 2dtg_E          558 PWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNP-SVPLDPISVSNSSSQIILKWKPP--SDPNGNITHYLVFWER  634 (897)
T ss_dssp             SSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCC-CCCEEEEEEECSSSCEEEEEECC--CCSSSSCSEEECCEEE
T ss_pred             CCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCC-cCCcceEEEeCCCCEEEEEEeCC--CCCCCCeeEEEEEEEE
Confidence            99999999999 898887    4544 44567766666 57999999999999999999999  5677889999999876


Q ss_pred             ccCCCc----------------------------------------------------------------eE--------
Q psy8774         131 KIDANN----------------------------------------------------------------VI--------  138 (427)
Q Consensus       131 ~~~~~~----------------------------------------------------------------~~--------  138 (427)
                      ......                                                                |.        
T Consensus       635 ~~~~~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~~~~n~v~  714 (897)
T 2dtg_E          635 QAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVF  714 (897)
T ss_dssp             ECCCCSCTTCSSSCSCCCCCC-----------------------------------------------------------
T ss_pred             CCCCccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEEccCceEE
Confidence            432100                                                                00        


Q ss_pred             --------------------------EEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCC---CCCeEEEccc--ccCC
Q psy8774         139 --------------------------HRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPW---SPKLSLMTAR--DMVR  187 (427)
Q Consensus       139 --------------------------~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~---s~~~~~~t~~--~~p~  187 (427)
                                                ......+++.|.+|.|++.|.|+|+|.|..|.+..   +..+.++|..  .+|.
T Consensus       715 ~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~~~~p~  794 (897)
T 2dtg_E          715 VPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADD  794 (897)
T ss_dssp             ---------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCCCCCCC
T ss_pred             ccCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCccCCCC
Confidence                                      00012478999999999999999999999998754   5667787754  5678


Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccc
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKS  267 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (427)
                      +|.++.+...+.+++.|+|++|..++|.+.+|.|+|+..+.......    .                        ....
T Consensus       795 ~P~~l~~~~~~~~sv~LsW~~P~~~nG~I~~Y~V~y~~~~~~~~~~~----~------------------------~~~~  846 (897)
T 2dtg_E          795 IVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLC----D------------------------TRKH  846 (897)
T ss_dssp             CCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCC----C------------------------CSSS
T ss_pred             CCcceEEEeCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCcceEEE----E------------------------eeee
Confidence            89999998888999999999998888999999999987632110000    0                        0111


Q ss_pred             cCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCC
Q psy8774         268 VPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED  312 (427)
Q Consensus       268 ~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~  312 (427)
                      ....++++|.+|.|+ .|.|+|+|.+..|.|++|.++.+.|.+..
T Consensus       847 ~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p  890 (897)
T 2dtg_E          847 FALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYL  890 (897)
T ss_dssp             CCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC
T ss_pred             ecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCC
Confidence            345678999999999 69999999999999999999999986543

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=99.97  E-value=3.6e-28  Score=249.49  Aligned_cols=310  Identities=18%  Similarity=0.207  Sum_probs=229.9

Q ss_pred             cceEEEcCCCCCceEEEEEEEEeccCcCccc--ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEE
Q psy8774          47 NMSFLITNLERGVEYEFRIAGQNHIGYGQET--VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLY  124 (427)
Q Consensus        47 ~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~--~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y  124 (427)
                      ..++.|.+|.+...|.|++.|.|..|.+...  ...+...+    .+|..+.+...+.+.+.|+|.++. ...++++.+|
T Consensus       222 ~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P----~~~~~p~~~~~~~~~v~l~w~~~~-~~g~~~i~~Y  296 (731)
T 2v5y_A          222 IASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPP----VPIAPPQLASVGATYLWIQLNANS-INGDGPIVAR  296 (731)
T ss_dssp             EEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCC----CBSSCCEEEEECSSCEEEECCCSS-BSSCSCCCEE
T ss_pred             eEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCC----CCCCCcceeccCCceEEEEeCCcc-cCCCCccEEE
Confidence            3589999999999999999999999974332  33344332    334444555668889999999874 2344689999


Q ss_pred             EEEEEEccCCCceEE-EeeeeeEEEEccCCCCcEEEEEEEEe--eCCCCCCCCCCeEEEccc-ccCCCCCceEEEeeeCc
Q psy8774         125 NVKFHKKIDANNVIH-RNTTQTKAVFSNLEEGIEYSAEVQAI--TKAGPGPWSPKLSLMTAR-DMVRAPLGVKALATSDQ  200 (427)
Q Consensus       125 ~v~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~a~--~~~g~~~~s~~~~~~t~~-~~p~~p~~l~~~~~~~~  200 (427)
                      .|+|+..  +..+.. ......++.|.+|.|++.|.|+|+|.  |..|.+.+|..+.+.+.. .+|.+|.++++...+.+
T Consensus       297 ~v~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~  374 (731)
T 2v5y_A          297 EVEYCTA--SGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSR  374 (731)
T ss_dssp             EEEEEES--SSSCEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSS
T ss_pred             EEEEEEC--CCCceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCC
Confidence            9999886  333332 33457899999999999999999999  999999889888888855 45588999999999999


Q ss_pred             EEEEEeeeCCCC--CCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccC
Q psy8774         201 SVEVWWKPVPAG--RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTS  278 (427)
Q Consensus       201 si~v~W~~p~~~--~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  278 (427)
                      ++.|+|++|...  ++.+.+|.|+|+.........+.                          .|........++++|.+
T Consensus       375 sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~i~~  428 (731)
T 2v5y_A          375 QITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVRE--------------------------EVSWDTENSHPQHTITN  428 (731)
T ss_dssp             CEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEE--------------------------EEECCSSCSSCEEEECS
T ss_pred             eEEEEEECCCcccccceeeeEEEEEEEccCCCCccce--------------------------eEEEEecCCcceEEECC
Confidence            999999998642  35678999999876321111110                          00112335567899999


Q ss_pred             CCCCCeEEEEEEEEeccCCCCCccceEEeecC---CCCC-cceEEeecCCCeEEEEecCCCcCCCc--eEEEEEeheeec
Q psy8774         279 LEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP---EDVP-LSLRAHDVSTHSMTLSWSPPIKLNPV--KYKEVSEKIQER  352 (427)
Q Consensus       279 L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~---~~~P-~~l~~~~~~~~~v~l~W~~P~~~~g~--~Y~i~~~~~~~~  352 (427)
                      |.|++.|.|+|+|+|..|.|. |..+.++|..   ..+| ..+.... ..+++.|+|++|...+|.  +|+|.+......
T Consensus       429 L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~~~~~~~~-~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~  506 (731)
T 2v5y_A          429 LSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPTESIQGST-FEEKIFLQWREPTQTYGVITLYEITYKAVSSF  506 (731)
T ss_dssp             CCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCCCCCTTTCEEEE-ETTEEEEECCCCSCCSSCCCEEEEEEEEEEEC
T ss_pred             CCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCCCCCcceEEeee-cCCeEEEEEcCCCCCCCCccceEEEEEECcCC
Confidence            999999999999999999985 7878888742   2223 3555543 478999999999887773  999998754321


Q ss_pred             c-----------eeeeeeEEEEeecccccccceEEEEEeecccCCCCcch
Q psy8774         353 R-----------LQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKK  391 (427)
Q Consensus       353 ~-----------l~~~t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~  391 (427)
                      .           ....+.-..+....|.+...|.|+|+|.|.+|.|++..
T Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~  556 (731)
T 2v5y_A          507 DPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPAT  556 (731)
T ss_dssp             C---CCCCCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEEE
T ss_pred             CccccccCcceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCcc
Confidence            1           01111112346788999999999999999999998763

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A

Probab=99.96  E-value=1.4e-27  Score=217.60  Aligned_cols=263  Identities=15%  Similarity=0.191  Sum_probs=182.8

Q ss_pred             CCCCCCCeeeEEEe-----ecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEE
Q psy8774          86 GPPTGPPANISHHF-----QTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        86 ~~p~~~p~~~~~~~-----~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~  160 (427)
                      ++|..+| ++....     .+.++|.|+|+++...+.++.+.+|.|+|+.....  ....  ..+...+.+|.|++.|.|
T Consensus         2 ~~Ps~p~-~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~--~~~~--~~~~~~~~~l~p~t~Y~~   76 (290)
T 3l5i_A            2 DRPSKAP-SFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSH--LQNY--TVNATKLTVNLTNDRYLA   76 (290)
T ss_dssp             CCCSSCC-CEEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSC--CEEE--EESSSEEEEEECSSCEEE
T ss_pred             CCCCCCC-ceeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcC--ceeE--ecCCcEEEEEcCCceEEE
Confidence            4455545 444332     24689999999865456778999999999987332  2222  233446788999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI  239 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~  239 (427)
                      +|+|.|..|.|..+. +.+.+ ...+|.+|.++.+...+ +++.|+|++|.   +.+.+|.|+|+.........      
T Consensus        77 ~V~A~n~~G~s~~s~-~~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~------  145 (290)
T 3l5i_A           77 TLTVRNLVGKSDAAV-LTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPR---ESVKKYILEWCVLSDKAPCI------  145 (290)
T ss_dssp             EEEEEESSCBCCCEE-EEECCTTCCCCCCCEEEEEEEET-TEEEEEEECCS---SCCCEEEEEEEEECSSSCCC------
T ss_pred             EEEEEcCCCCCCCce-EEeecccccCCCccceeEEEeCC-CeEEEEEeCCC---CCCCcEEEEEEECCCCCCCC------
Confidence            999999999885542 22222 11356777888887764 79999999997   37999999999864321110      


Q ss_pred             cccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec---CCCCCcc
Q psy8774         240 PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK---PEDVPLS  316 (427)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~---~~~~P~~  316 (427)
                                           ..|..........+++.+|.|++.|.|+|+|+|..|.|.. ..+.+.|.   |..+ .+
T Consensus       146 ---------------------~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~-~~~~~~t~~~~P~~~-p~  202 (290)
T 3l5i_A          146 ---------------------TDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSP-ESIKAYLKQAPPSKG-PT  202 (290)
T ss_dssp             ---------------------CEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEECCC-EEEEEESSCCCCSSC-CC
T ss_pred             ---------------------cCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCccccc-EEEEeEccccCCCCC-Ce
Confidence                                 0123333445667889999999999999999999998884 34555553   3333 47


Q ss_pred             eEEeecCCCeEEEEecCC--CcCCC--ceEEEEEeheeecc--eeeeeeEEEEeecccccccceEEEEEeecccCCCC
Q psy8774         317 LRAHDVSTHSMTLSWSPP--IKLNP--VKYKEVSEKIQERR--LQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGR  388 (427)
Q Consensus       317 l~~~~~~~~~v~l~W~~P--~~~~g--~~Y~i~~~~~~~~~--l~~~t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~  388 (427)
                      +.+...+.+++.|+|++|  ...+|  .+|+|.+.......  ......-..+.+..|.+...|.|+|+|.|.+| |.
T Consensus       203 ~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~  279 (290)
T 3l5i_A          203 VRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GK  279 (290)
T ss_dssp             EEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE-EE
T ss_pred             eeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCeEEEEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CC
Confidence            888888999999999944  44555  39999986432111  11111112346788999999999999999999 63

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}

Probab=99.95  E-value=3.8e-26  Score=209.12  Aligned_cols=263  Identities=16%  Similarity=0.205  Sum_probs=179.5

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe---ecCcceEEEcC--CCCCceEEEEEEEEeccCcCccc-ceE
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV---NSKNMSFLITN--LERGVEYEFRIAGQNHIGYGQET-VRY   80 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~~--L~p~t~Y~~~V~a~~~~g~~~~~-~~~   80 (427)
                      ..++.|+|++|.+.++++. |.|+|+..+...|....   ....+.+.++.  |.+++.|.|+|+|.+ .|.|+.+ ...
T Consensus        16 n~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A~n-~~~S~~s~~~~   93 (306)
T 3s98_A           16 DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDS   93 (306)
T ss_dssp             TTEEEEECC--------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEEEC-SSCEEEEECCC
T ss_pred             CCeEEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEEEe-CCcCCCEeeee
Confidence            4567899999987666776 99999987766786542   44556666654  689999999999999 7776644 233


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCC----CCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCc
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTH----RNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGI  156 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~----~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t  156 (427)
                      +.+....+.+||. +.+.... ++|.|+|.|+....    .++.+.+|.|.|+..+....+. .....+.+.|.+|.|++
T Consensus        94 f~~~~~~~~~pP~-v~~~~~~-~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~-~~~~~~~~~l~~L~p~t  170 (306)
T 3s98_A           94 FTPFRKAQIGPPE-VHLEAED-KAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEER-IENIYSRHKIYKLSPET  170 (306)
T ss_dssp             BCHHHHCBCCCCE-EEEEECS-SCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEE-EEEECTEEEECSCCTTC
T ss_pred             EechhhCccCCCe-EEEEEcC-CEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEE-EecccceEEEccCCCCC
Confidence            3333344556675 7766544 68999999653211    1468899999999875443333 34557889999999999


Q ss_pred             EEEEEEEEee--CCCCCCCCCCeEEEccccc-CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEec-----cc
Q psy8774         157 EYSAEVQAIT--KAGPGPWSPKLSLMTARDM-VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMT-----AV  228 (427)
Q Consensus       157 ~Y~~~V~a~~--~~g~~~~s~~~~~~t~~~~-p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~-----~~  228 (427)
                      .|.|+|+|.+  ..|.|++|..+.+.|..+. +.+|.++.+... ++++.|+|+++..    ..+|.+.+...     ..
T Consensus       171 ~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~~~~-~~s~~l~W~~p~~----~~~~~v~~~~gy~~~~~~  245 (306)
T 3s98_A          171 TYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ-NQNYVLKWDYTYA----NMTFQVQWLHAFLKRNPG  245 (306)
T ss_dssp             EEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEEEEE-TTEEEEEEECSSS----SCEEEEEEEEGGGGSCC-
T ss_pred             eEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEEEEe-cCEEEEEeCCCCC----cEEEEEEEehhhhhcccc
Confidence            9999999999  6788999999999985554 478899998665 5789999998762    23566665532     01


Q ss_pred             ccccccccccccccccccceeEEeeecccccccccc---ccccCCCCceeccC-CCCCCeEEEEEEEEeccCCCCCccce
Q psy8774         229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS---QKSVPLTESAELTS-LEKFTEYAVAVAARTVNGLGRLSGKV  304 (427)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~-L~p~t~Y~~~V~a~~~~G~g~~s~~~  304 (427)
                      .....|                             .   .......+.+.+.+ |.+...|.|||+|.|..|.|.+|...
T Consensus       246 ~~~~~W-----------------------------~~~~~c~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s~~~  296 (306)
T 3s98_A          246 NHLYKW-----------------------------KQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEI  296 (306)
T ss_dssp             ---CCC-----------------------------EECGGGTTBSSSEEEEEGGGSCSSEEEEEEEEECSSCBCCCCCCE
T ss_pred             ccccCc-----------------------------eECCCceeCCCccccCchhhcccCCEEEEEEEccCCCcccccccc
Confidence            112223                             3   11233456677776 45555999999999999999999999


Q ss_pred             EEee
Q psy8774         305 TVKV  308 (427)
Q Consensus       305 ~~~t  308 (427)
                      .|.|
T Consensus       297 ~~~~  300 (306)
T 3s98_A          297 KFDT  300 (306)
T ss_dssp             EEEC
T ss_pred             ccCc
Confidence            9887

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A

Probab=99.95  E-value=2.7e-26  Score=198.94  Aligned_cols=196  Identities=22%  Similarity=0.378  Sum_probs=159.9

Q ss_pred             CCCCCCCeeeEEEeecCCEEEEEeeCCCC--CCCCcceeEEEEEEEEccCCC-ceEEEeeeeeEEEEccCCCCcEEEEEE
Q psy8774          86 GPPTGPPANISHHFQTPDVVCITWDPPLR--THRNGQIVLYNVKFHKKIDAN-NVIHRNTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        86 ~~p~~~p~~~~~~~~~~~~v~v~W~~p~~--~~~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      ++|+.+|.++++...+.+++.|+|++|..  .+.++.+.+|.|+|+..+... .........+++.|.+|.|++.|.|+|
T Consensus         2 d~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   81 (211)
T 3p4l_A            2 DLPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSV   81 (211)
T ss_dssp             -CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEESSSEEEECSCCTTCEEEEEE
T ss_pred             CCCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCCceEEEecCcCCCCEEEEEE
Confidence            46778999999999999999999999742  233578899999998764332 233444567899999999999999999


Q ss_pred             EEeeCCCCCCCCCCeEEEcccccCC-CCCceEEEee--eCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccc
Q psy8774         163 QAITKAGPGPWSPKLSLMTARDMVR-APLGVKALAT--SDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI  239 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~~~~t~~~~p~-~p~~l~~~~~--~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~  239 (427)
                      +|.|..|.|.+|..+.+.|....|. +|.++++...  +.+++.|+|++|...+|.+.+|.|+|+.........+.    
T Consensus        82 ~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~----  157 (211)
T 3p4l_A           82 MVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV----  157 (211)
T ss_dssp             EEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSE----
T ss_pred             EEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceE----
Confidence            9999999999999999999777776 9999999887  47899999999987788999999999976433222220    


Q ss_pred             cccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         240 PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                                              ........++++|.+|.|++.|.|+|+|+|..|.|++|..+.+.+.
T Consensus       158 ------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~  203 (211)
T 3p4l_A          158 ------------------------IEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTP  203 (211)
T ss_dssp             ------------------------EEEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC
T ss_pred             ------------------------EEEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCc
Confidence                                    1223456789999999999999999999999999999999999874

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=99.95  E-value=4.4e-28  Score=252.54  Aligned_cols=296  Identities=16%  Similarity=0.193  Sum_probs=206.9

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEcc-------------CCCceEEEee------------eee
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI-------------DANNVIHRNT------------TQT  145 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~-------------~~~~~~~~~~------------~~~  145 (427)
                      .|.++++...+++++.|+|++|.. ...+.+.+|.|+|+...             +...|.....            ..+
T Consensus       471 ~~~~l~v~~~s~~sv~LsW~~p~~-~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~  549 (897)
T 2dtg_E          471 ELLKFSYIRTSFDKILLRWEPYWP-PDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP  549 (897)
T ss_dssp             CBCCCSEEEECSSCEEEECCCCCS-SSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred             ceeEEEEEEEecCeEEEEecCCCC-CCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCcccccccccccc
Confidence            456888899999999999999852 33458999999997652             0112222111            247


Q ss_pred             EEEEccCCCCcEEEEEEEE-eeCCCC----CCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEE
Q psy8774         146 KAVFSNLEEGIEYSAEVQA-ITKAGP----GPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQ  220 (427)
Q Consensus       146 ~~~i~~L~p~t~Y~~~V~a-~~~~g~----~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~  220 (427)
                      ++.+.+|.|++.|.|+|+| .|..|.    |+.|..+.++|..++|.+|.++.+...+.++|.|+|++|...+|.+.+|.
T Consensus       550 ~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~Y~  629 (897)
T 2dtg_E          550 GWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYL  629 (897)
T ss_dssp             EEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSEEE
T ss_pred             ceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCCCeeEEE
Confidence            8999999999999999999 898887    67899999999888999999999999999999999999987889999999


Q ss_pred             EEEEeccccccccccccccccccccccee-EEeee----------------------------------cccccccccc-
Q psy8774         221 IFYTMTAVEDLDEWSQKSIPLTESSNIAR-IFYTM----------------------------------TAVEDLDEWS-  264 (427)
Q Consensus       221 I~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------------------------------~~~~~~~~~~-  264 (427)
                      |+|+.......  .............+.. +.+.+                                  ....-...|. 
T Consensus       630 V~~~~~~~~~~--~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~  707 (897)
T 2dtg_E          630 VFWERQAEDSE--LFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFED  707 (897)
T ss_dssp             CCEEEECCCCS--CTTCSSSCSCCCCCC----------------------------------------------------
T ss_pred             EEEEECCCCcc--ceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEE
Confidence            99987532110  0000000000000000 00000                                  0000001111 


Q ss_pred             --------------------------------ccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCC---ccceEEeec
Q psy8774         265 --------------------------------QKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRL---SGKVTVKVK  309 (427)
Q Consensus       265 --------------------------------~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~---s~~~~~~t~  309 (427)
                                                      ....+..++++|.+|.|++.|.|+|+|.|..|.|..   +..+.++|.
T Consensus       708 ~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~  787 (897)
T 2dtg_E          708 YLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTM  787 (897)
T ss_dssp             ----------------------------CCSCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECC
T ss_pred             ccCceEEccCCCcccccccccccccCccccceEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEecc
Confidence                                            112235579999999999999999999999998764   556777775


Q ss_pred             C----CCCCcceEEeecCCCeEEEEecCCCcCCCc--eEEEEEeheeecceee------eeeEEEEeecccccccceEEE
Q psy8774         310 P----EDVPLSLRAHDVSTHSMTLSWSPPIKLNPV--KYKEVSEKIQERRLQK------YGQYRYFETRDESYIGKRVER  377 (427)
Q Consensus       310 ~----~~~P~~l~~~~~~~~~v~l~W~~P~~~~g~--~Y~i~~~~~~~~~l~~------~t~y~~~~~~~~~~~~~~~~~  377 (427)
                      +    +.+|.++++...+.+++.|+|++|..++|.  +|.|.+..........      .+.-..+....|.+. .|.|+
T Consensus       788 ~~~~~p~~P~~l~~~~~~~~sv~LsW~~P~~~nG~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~r  866 (897)
T 2dtg_E          788 PEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVR  866 (897)
T ss_dssp             CCCCCCCCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EECCC
T ss_pred             CccCCCCCCcceEEEeCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCcceEEEEeeeeecccCcEEECCCCCC-cEEEE
Confidence            4    467788888888899999999999988884  9999876443211000      011112356778888 69999


Q ss_pred             EEeecccCCCCcc
Q psy8774         378 MEVRGRKGRGRPK  390 (427)
Q Consensus       378 v~a~~~~g~g~p~  390 (427)
                      |+|.|.+|.|++.
T Consensus       867 V~A~n~~G~G~~S  879 (897)
T 2dtg_E          867 IRATSLAGNGSWT  879 (897)
T ss_dssp             CCEEETTBCCCCC
T ss_pred             EEEEeCCcccCCC
Confidence            9999999999864

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*

Probab=99.94  E-value=1.9e-26  Score=220.67  Aligned_cols=261  Identities=19%  Similarity=0.231  Sum_probs=127.8

Q ss_pred             ceEEEEEeeCCCCCC-------CcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEec--cCcCccc
Q psy8774           7 EVTIELVWSQPTQTY-------GEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNH--IGYGQET   77 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~-------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~--~g~~~~~   77 (427)
                      .++|.|+|. |...+       +.+.+|.|.|+..+....... .....++.|.+|.|++.|.|+|+|.+.  .|.|..+
T Consensus       117 ~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S  194 (414)
T 3se4_A          117 DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERI-ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYS  194 (414)
T ss_dssp             SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEE-EEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEEC
T ss_pred             CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEE-ecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccC
Confidence            468999999 64222       467899999998776543222 345678999999999999999999994  5667655


Q ss_pred             -ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEc-------cCCCceEEE----eeeee
Q psy8774          78 -VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK-------IDANNVIHR----NTTQT  145 (427)
Q Consensus        78 -~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~-------~~~~~~~~~----~~~~~  145 (427)
                       ...+.|....|..+|.++.+...+ .++.|+|+++.      ...+|.|+|+..       +....+...    ....+
T Consensus       195 ~~~~~~t~~~~~~~~P~~v~~~~~~-~~~~l~W~pp~------~~~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~  267 (414)
T 3se4_A          195 PVHCIKTTVENELPPPENIEVSVQN-QNYVLKWDYTY------ANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTT  267 (414)
T ss_dssp             CCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEECSS------SSCEEEEEEEESGGGSCCCC--CCCCBCSTTTTBSSS
T ss_pred             cccccccccccccCCCCccEEEEec-CCeEEEECCCC------CCeEEEEEEEehhccccccccccCceECCCccCCCCC
Confidence             345677666777889999988765 67999999973      334999999973       112222221    23467


Q ss_pred             EEEEc-cCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccc-cCCCCCceEEEeeeCcEEEEEeeeCCCCC------Ccee
Q psy8774         146 KAVFS-NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD-MVRAPLGVKALATSDQSVEVWWKPVPAGR------GKIL  217 (427)
Q Consensus       146 ~~~i~-~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~-~p~~p~~l~~~~~~~~si~v~W~~p~~~~------g~i~  217 (427)
                      .+.+. +|.+++.|.|+|+|.|..|.|++|....+.+..+ ++.+|. +++.. ..+++.|.|++|...+      +.+.
T Consensus       268 ~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~~~~~~pP~-l~~~~-~~~si~v~W~~P~~~~~~~~~~~~~~  345 (414)
T 3se4_A          268 QCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPV-FNIRS-LSDSFHIYIGAPKQSGNTPVIQDYPL  345 (414)
T ss_dssp             EEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEETTCC----------------------------------------
T ss_pred             EEcCCcccccCccEEEEEEEecCCCcccccccccccchhccccCCCe-EEEEE-CCCeEEEEEECCCCccccchhhcCCe
Confidence            78886 5999999999999999999999999999998666 456666 88875 4579999999998654      3678


Q ss_pred             EEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEec---
Q psy8774         218 GYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTV---  294 (427)
Q Consensus       218 ~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~---  294 (427)
                      +|.|.|+..+..  ...                             .  .....++++|.+|.|++.|.|+|+|.+.   
T Consensus       346 ~Y~v~y~~~~~~--~~~-----------------------------~--~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~  392 (414)
T 3se4_A          346 IYEIIFWENTSN--AER-----------------------------K--IIEKKTDVTVPNLKPLTVYCVKARAHTMDEK  392 (414)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             EEEEEEEECCCC--ceE-----------------------------E--EEecCCeEEeCCCCCCCeEEEEEEEEecccc
Confidence            899988775321  111                             1  1234568899999999999999999983   


Q ss_pred             -cCCCCCccceEEeecCC
Q psy8774         295 -NGLGRLSGKVTVKVKPE  311 (427)
Q Consensus       295 -~G~g~~s~~~~~~t~~~  311 (427)
                       .|.|.+|..+.++|.+.
T Consensus       393 ~~g~g~~S~~~~~~T~~~  410 (414)
T 3se4_A          393 LNKSSVFSDAVCEKTKPG  410 (414)
T ss_dssp             ------------------
T ss_pred             cCCCCCCCCCEeEEeCCC
Confidence             58999999999888554

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=99.94  E-value=1.9e-25  Score=196.75  Aligned_cols=192  Identities=20%  Similarity=0.311  Sum_probs=156.9

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc-eEEEeeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN-VIHRNTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      .|+.+|.++++...+.+++.|+|+++     ++.+.+|.|+|+....... ........+++.|.+|.|++.|.|+|+|.
T Consensus         4 ~p~~~P~~l~~~~~~~~si~l~W~~p-----~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~   78 (234)
T 3f7q_A            4 MDLGAPQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAY   78 (234)
T ss_dssp             -CCCCCEEEEEEECSSSCEEEEEECC-----SSCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCCCCcceEEEEcCCCEEEEEEECC-----CCccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEE
Confidence            46788999999999999999999998     2688999999997643332 23344668899999999999999999999


Q ss_pred             eCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccc--ccccccccccc
Q psy8774         166 TKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLD--EWSQKSIPLTE  243 (427)
Q Consensus       166 ~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~--~~~~~~~~~~~  243 (427)
                      |..|.|++|..+.++|...+|.+|.++++...+.+++.|+|++|...+|.+.+|.|+|+..+.....  .+.  .     
T Consensus        79 n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~--~-----  151 (234)
T 3f7q_A           79 GAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMK--K-----  151 (234)
T ss_dssp             ETTEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCE--E-----
T ss_pred             eCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcce--E-----
Confidence            9999999999999999888888999999999999999999999987788999999999986432111  010  0     


Q ss_pred             cccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc-eEEeecC
Q psy8774         244 SSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK-VTVKVKP  310 (427)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~-~~~~t~~  310 (427)
                                          ........++++|.+|.|++.|.|+|+|+|..|.|++|.. +.++|.+
T Consensus       152 --------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~  199 (234)
T 3f7q_A          152 --------------------VLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQP  199 (234)
T ss_dssp             --------------------CCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSC
T ss_pred             --------------------EEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCC
Confidence                                1122334568999999999999999999999999999874 6666643

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=99.94  E-value=9.5e-25  Score=188.25  Aligned_cols=189  Identities=17%  Similarity=0.254  Sum_probs=149.9

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccCCCCcEEEEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNLEEGIEYSAEVQ  163 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V~  163 (427)
                      ++.+|.++.+.. +.+++.|+|+++  .+.++.+.+|.|+|+.......+...    ....+.+.+ +|.|++.|.|+|+
T Consensus         5 ~P~~P~~~~~~~-~~~sv~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V~   80 (205)
T 1cfb_A            5 VPNAPKLTGITC-QADKAEIHWEQQ--GDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRVI   80 (205)
T ss_dssp             CCCCCEEEEEEE-CSSEEEEEEECC--CCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEEE
T ss_pred             CCCCCCCcEEEe-cCCEEEEEEECc--ccCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEEE
Confidence            446899999999 999999999998  45667899999999876433333221    134567777 9999999999999


Q ss_pred             EeeCCCCCCCC-CCeEEEcccccC-CCCCceEEEeeeCcEEEEEeeeCC--CCCCceeEEEEEEEecccccccccccccc
Q psy8774         164 AITKAGPGPWS-PKLSLMTARDMV-RAPLGVKALATSDQSVEVWWKPVP--AGRGKILGYQIFYTMTAVEDLDEWSQKSI  239 (427)
Q Consensus       164 a~~~~g~~~~s-~~~~~~t~~~~p-~~p~~l~~~~~~~~si~v~W~~p~--~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~  239 (427)
                      |.|..|.|.+| ....++|....| .+|.++.+...+.+++.|+|++|.  ..+|.+.+|.|+|+..+..  ..+..   
T Consensus        81 A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~--~~~~~---  155 (205)
T 1cfb_A           81 AFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPA--AAWEN---  155 (205)
T ss_dssp             EEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTT--CCCEE---
T ss_pred             EEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCC--CCcEE---
Confidence            99999999888 567888866555 689999999999999999999998  5678999999999887432  11200   


Q ss_pred             cccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCC-ccceEEeec
Q psy8774         240 PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRL-SGKVTVKVK  309 (427)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~-s~~~~~~t~  309 (427)
                                              ........++++|.+|.|++.|.|+|+|+|..|.|++ |..+.+.|.
T Consensus       156 ------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~  202 (205)
T 1cfb_A          156 ------------------------NNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG  202 (205)
T ss_dssp             ------------------------EEECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred             ------------------------EEecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence                                    1112235679999999999999999999999999995 677777774

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=99.93  E-value=2.8e-24  Score=185.89  Aligned_cols=186  Identities=18%  Similarity=0.196  Sum_probs=148.7

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCc-ceeEEEEEEEEccCCCceEEEe------eeeeEEEEccCCCCcEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNG-QIVLYNVKFHKKIDANNVIHRN------TTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~-~i~~Y~v~~~~~~~~~~~~~~~------~~~~~~~i~~L~p~t~Y~~  160 (427)
                      +|.+|.++++...+. ++.|+|++|.  ..+| .+.+|.|+|+..+.. .+....      ...+++.+.+|.|++.|.|
T Consensus         8 ~P~~P~~~~~~~~~~-s~~l~W~~p~--~~~g~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~   83 (209)
T 2vkw_A            8 TPSSPSIDQVEPYSS-TAQVQFDEPE--ATGGVPILKYKAEWRAVGEE-VWHSKWYDAKEASMEGIVTIVGLKPETTYAV   83 (209)
T ss_dssp             CCCCCEEEEEEECSS-CEEEEEECCS--CCCSSCCCEEEEEEEESSCC-CCEEEEEEHHHHHHHSEEEECCCCTTCEEEE
T ss_pred             CCcCCcccEeeeccC-eEEEEEcCCC--cCCCcceeEEEEEEeeCCCC-CceEeEeeccCCCccceEEeCCCCCCCeEEE
Confidence            446689999988777 6899999983  4445 499999999987432 332222      1256899999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEcccc-cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMTARD-MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI  239 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t~~~-~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~  239 (427)
                      +|+|.|..|.|.+|..+.+.|... +|.+|.++.+...+.+++.|+|.+|...++.+.+|.|+|+.. .   ..+..   
T Consensus        84 ~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~-~---~~~~~---  156 (209)
T 2vkw_A           84 RLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRAL-S---SEWKP---  156 (209)
T ss_dssp             EEEEEETTEECCCCCCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEET-T---SCCCC---
T ss_pred             EEEEEcCCcccCCcccccccccCCCCCCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEECC-C---CCCce---
Confidence            999999999999999998888655 788999999888899999999999966678999999999983 1   11200   


Q ss_pred             cccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         240 PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                                              ........++++|.+|.|++.|.|+|+|.|..|.|++|....+++
T Consensus       157 ------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~  201 (209)
T 2vkw_A          157 ------------------------EIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA  201 (209)
T ss_dssp             ------------------------CEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred             ------------------------eeecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhh
Confidence                                    112334567899999999999999999999999999998776664

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=99.93  E-value=2.1e-24  Score=186.03  Aligned_cols=178  Identities=21%  Similarity=0.327  Sum_probs=148.4

Q ss_pred             cceEEEEEeeCCCCCCCcceEeEEEEEEecC-ccceeEe---ecCcceEEEcCCCCCceEEEEEEEEeccCcCccc--ce
Q psy8774           6 PEVTIELVWSQPTQTYGEILGYRVKYGVREH-TLKENLV---NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET--VR   79 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~--~~   79 (427)
                      ++++|.|+|++|.+.++++.+|.|+|+.... ..|....   ....+.+.+ +|.|++.|.|+|+|.|..|.|..+  ..
T Consensus        17 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~   95 (205)
T 1cfb_A           17 QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSD   95 (205)
T ss_dssp             CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCC
T ss_pred             cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEEEEEECCccCCCCCCce
Confidence            7889999999998778899999999987643 4564332   456677887 999999999999999999998866  36


Q ss_pred             EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEee---eeeEEEEccCCCCc
Q psy8774          80 YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT---TQTKAVFSNLEEGI  156 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t  156 (427)
                      .+.|.+.+|+.+|.++.+...+.+++.|+|++|...+.+|.+.+|.|+|+..+....+.....   ..+++.|.+|.|++
T Consensus        96 ~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t  175 (205)
T 1cfb_A           96 SCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFV  175 (205)
T ss_dssp             CEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSC
T ss_pred             eEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEEecCCCccEEEEcCCCCCc
Confidence            788888888888999999999999999999999654678899999999998855443443332   47899999999999


Q ss_pred             EEEEEEEEeeCCCCCCC-CCCeEEEcccc
Q psy8774         157 EYSAEVQAITKAGPGPW-SPKLSLMTARD  184 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~-s~~~~~~t~~~  184 (427)
                      .|.|+|+|.|..|.|++ |..+.++|.++
T Consensus       176 ~Y~~~V~A~n~~G~g~~ss~~v~~~T~e~  204 (205)
T 1cfb_A          176 KYLIKVVAINDRGESNVAAEEVVGYSGED  204 (205)
T ss_dssp             EEEEEEEEEETTEECSSCCCCEEEESSSC
T ss_pred             EEEEEEEEEcCCCcCCCCCCcEEEecCCC
Confidence            99999999999999984 78888888654

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*

Probab=99.93  E-value=3.9e-24  Score=196.97  Aligned_cols=274  Identities=12%  Similarity=0.105  Sum_probs=177.0

Q ss_pred             ccceEEEEEeeCCCCC-CCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEe-ccCcCcccce---
Q psy8774           5 EPEVTIELVWSQPTQT-YGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQN-HIGYGQETVR---   79 (427)
Q Consensus         5 ~~~~sv~l~W~~p~~~-~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~-~~g~~~~~~~---   79 (427)
                      .+.++|.|+|++|... ++.+.+|.|.+...    |.....  ...+.+.+|.++..|.|+|+|.. ..|.|..+..   
T Consensus        15 ~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~----~~~~~~--~~~~~~~~~~~~~~y~~~V~a~~~~~~~g~~s~~~~~   88 (314)
T 3bpo_C           15 ENLCTVIWTWNPPEGASSNCSLWYFSHFGDK----QDKKIA--PETRRSIEVPLNERICLQVGSQCSTNESEKPSILVEK   88 (314)
T ss_dssp             ETTTEEEEEEECCSSCCCSSCCCEEECCC------CCCEEE--SSSEEEEECCCSSCEEEEEEECC---------CCEEE
T ss_pred             CCceEEEEEEcCCCCCCCCceEEEEEEeccc----CceEec--cccEEEEEEcCCCcEEEEEEEEecCCCCCCCCcCeee
Confidence            4567999999998743 56778999987542    222212  33456678999999999999964 4555443322   


Q ss_pred             EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE----EeeeeeEEEEccCC--
Q psy8774          80 YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH----RNTTQTKAVFSNLE--  153 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~----~~~~~~~~~i~~L~--  153 (427)
                      .+.+....|+.+|.++.+...+.+.+.|+|+++.  +. +.+.+|.|.|+..+......+    .......+.+..+.  
T Consensus        89 ~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~--~~-~~~~~Y~l~y~~~~~~~~~~C~~~~~~~~~~~c~~~~~~~~  165 (314)
T 3bpo_C           89 CISPPEGDPESAVTELQCIWHNLSYMKCSWLPGR--NT-SPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVK  165 (314)
T ss_dssp             EECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC------CCCCEEEEEEESSCSSCEECCCEEEETTEEEEEEECCC--
T ss_pred             eeecCCCCCCCCCEeceEEECCCCeEEEEECCCC--CC-CCCccEEEEEEeCCCCccccCcCeecCCCeEEEEECCCCcc
Confidence            2335667788889999999989999999999984  22 457899999987632221111    11224677887776  


Q ss_pred             --CCcEEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccc
Q psy8774         154 --EGIEYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVED  230 (427)
Q Consensus       154 --p~t~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~  230 (427)
                        ..+.|.|+|.|.|..|.+. +....+.. ....|.+|.++++. ...+++.|+|++|...++.+.+|+|+|+..+.  
T Consensus       166 ~~~~~~y~~~V~a~n~~G~~~-~~~~~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~--  241 (314)
T 3bpo_C          166 DSSFEQHSVQIMVKDNAGKIK-PSFNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQT--  241 (314)
T ss_dssp             ------CCEEEEEEETTSCSC-CEEEEECSSSSEECCCCEEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--C--
T ss_pred             ccceeEEEEEEEEEcCCCcee-cccEEEehhheEeeCCCCEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCC--
Confidence              4789999999999988874 33455544 33568999999997 77899999999997545567899999987632  


Q ss_pred             cccccccccc-ccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEec------cC-CCCCcc
Q psy8774         231 LDEWSQKSIP-LTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTV------NG-LGRLSG  302 (427)
Q Consensus       231 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~------~G-~g~~s~  302 (427)
                       ..|....+. ..+. +        .   .    ........+++.|.+|+|++.|.|+|+|.+.      .| .|.+|.
T Consensus       242 -~~w~~~~~~~~~c~-~--------~---~----~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~  304 (314)
T 3bpo_C          242 -ETHNVFYVQEAKCE-N--------P---E----FERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQ  304 (314)
T ss_dssp             -CCEEEEEESCCCCC-C--------T---T----SSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCC
T ss_pred             -CcceEEeccccccc-c--------c---c----cccccCCceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCC
Confidence             222100000 0000 0        0   0    0001234568899999999999999999984      45 577888


Q ss_pred             ceEEee
Q psy8774         303 KVTVKV  308 (427)
Q Consensus       303 ~~~~~t  308 (427)
                      .+.+.+
T Consensus       305 ~~~~~~  310 (314)
T 3bpo_C          305 EMSIGK  310 (314)
T ss_dssp             CEEESC
T ss_pred             CeEecc
Confidence            777765

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=99.93  E-value=3.4e-24  Score=186.01  Aligned_cols=189  Identities=17%  Similarity=0.225  Sum_probs=146.2

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--------------eeeeEEEEccCCCCc
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--------------TTQTKAVFSNLEEGI  156 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--------------~~~~~~~i~~L~p~t  156 (427)
                      +|.++++...+.+++.|+|+++.  ..++.+.+|.|+|+..+....+....              ....++.+.+|.|++
T Consensus         4 pP~~~~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t   81 (214)
T 2ibg_A            4 PPTPPNVTRLSDESVMLRWMVPR--NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQH   81 (214)
T ss_dssp             CCCCCEEEEEETTEEEEEEEEEC--CSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTC
T ss_pred             CCCCCEeeEecCCEEEEEEECCC--CCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCC
Confidence            56677778889999999999984  45578999999999864334443322              356788999999999


Q ss_pred             EEEEEEEEeeCCCCCCCCC-CeEEEccc----ccCCCCCceEEEeeeCcEEEEEeeeCC-CCCCceeEEEEEEEeccccc
Q psy8774         157 EYSAEVQAITKAGPGPWSP-KLSLMTAR----DMVRAPLGVKALATSDQSVEVWWKPVP-AGRGKILGYQIFYTMTAVED  230 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~-~~~~~t~~----~~p~~p~~l~~~~~~~~si~v~W~~p~-~~~g~i~~Y~I~~~~~~~~~  230 (427)
                      .|.|+|+|.|..|.|..+. ...+.+..    .+|.+|.++.+...+.+++.|+|++|. ..++.+.+|.|+|+..+.. 
T Consensus        82 ~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~-  160 (214)
T 2ibg_A           82 TYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSA-  160 (214)
T ss_dssp             EEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCC-
T ss_pred             EEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCC-
Confidence            9999999999999876655 33344422    245678999998889999999999996 3567999999999976321 


Q ss_pred             ccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         231 LDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                       ..+..                           ........++++|.+|.|++.|.|+|+|+|..|.|++|..+.++|..
T Consensus       161 -~~~~~---------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  212 (214)
T 2ibg_A          161 -GEYFK---------------------------ATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR  212 (214)
T ss_dssp             -SCCEE---------------------------EEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred             -cceEE---------------------------eeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence             22200                           11122335789999999999999999999999999999999998853

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*

Probab=99.92  E-value=1e-23  Score=198.71  Aligned_cols=262  Identities=12%  Similarity=0.119  Sum_probs=156.2

Q ss_pred             ceEEEEEeeCCCC---CCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEec----cCcCccc--
Q psy8774           7 EVTIELVWSQPTQ---TYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNH----IGYGQET--   77 (427)
Q Consensus         7 ~~sv~l~W~~p~~---~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~----~g~~~~~--   77 (427)
                      .+++.|+|+++.+   .++.+..|.|+|+..+...|.........  ...++..+..|.|+|+|++.    .|.|.++  
T Consensus        46 ~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~~~~~~~~~--~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~  123 (380)
T 3lb6_C           46 LGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTIITKNLH--YKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSW  123 (380)
T ss_dssp             SSEEEEEEECCCC------CCCEEEEEEEETTCSSCEEEEESSSE--EEEECCTTSCEEEEEEEECCHHHHSSSCCBCCC
T ss_pred             CceEEEEECCCCCccccccceEEEEEEECCCCCCcceEEEeccEE--EEEeecCCCceEEEEEeecCCcccCCccCcccc
Confidence            5889999999975   23568999999998776678777643333  33455669999999999954    5555433  


Q ss_pred             -ceEE-eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--E--e-eeeeEEEEc
Q psy8774          78 -VRYY-TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--R--N-TTQTKAVFS  150 (427)
Q Consensus        78 -~~~~-~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~--~-~~~~~~~i~  150 (427)
                       .... .+.++.|+.+|.++.+...+.+.+.++|+++..   .+...+|.|.|+..+......+  .  . .....+.+.
T Consensus       124 s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~p~~~---~~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~  200 (380)
T 3lb6_C          124 AETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIG---VLLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFP  200 (380)
T ss_dssp             EEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEECC---------CCEEEEEECTTCSSCEECSEEEEC--CEEEEECC
T ss_pred             chhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEcCCCC---CCCCccEEEEEEECCCCccccCCCccccCCceEEEEeC
Confidence             2333 345578888999999999999999999998742   2456789999987633221111  1  1 123356666


Q ss_pred             --cCCCCcEEEEEEEEeeCCCCCCCCCCeEEEccc-ccCCCCCceEEEeeeCcEEEEEeeeCCCCC-CceeEEEEEEEec
Q psy8774         151 --NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR-DMVRAPLGVKALATSDQSVEVWWKPVPAGR-GKILGYQIFYTMT  226 (427)
Q Consensus       151 --~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~-~~p~~p~~l~~~~~~~~si~v~W~~p~~~~-g~i~~Y~I~~~~~  226 (427)
                        ++.+++.|.|+|.|.|..|.+ .+..+.+.+.. .+|.+|.++.+...+.+++.|+|++|.... +.+.+|+|+|+..
T Consensus       201 ~~~~~~~~~Y~i~V~a~n~~G~~-~s~~~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~  279 (380)
T 3lb6_C          201 YLEASDYKDFYICVNGSSENKPI-RSSYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIRED  279 (380)
T ss_dssp             CCTTCSSSCEEEEEEEC-----C-CCEEEEECGGGSCCCCCCEEEEEC-------CEEEECCSSSCCSTTEEEEECC---
T ss_pred             CCcccceeEEEEEEEEEcCCeee-ccccEEEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCCCCCcceEEEEEEEEeC
Confidence              467899999999999887775 34445666644 468899999998877889999999987543 4778999999874


Q ss_pred             ccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccC-CCCCCeEEEEEEEEec-----cC-CCC
Q psy8774         227 AVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTS-LEKFTEYAVAVAARTV-----NG-LGR  299 (427)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-L~p~t~Y~~~V~a~~~-----~G-~g~  299 (427)
                      +    ..|                             .....  .+++.|.+ |+|++.|.|+|+|...     .| .|.
T Consensus       280 ~----~~w-----------------------------~~~~~--~~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSe  324 (380)
T 3lb6_C          280 D----TTL-----------------------------VTATV--ENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSE  324 (380)
T ss_dssp             --------------------------------------CCEE--SSSCC------------CCEEEEECTTTCSSCCCCC
T ss_pred             C----CCc-----------------------------eEecc--cceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCC
Confidence            2    123                             11111  13577888 9999999999999943     33 577


Q ss_pred             CccceEEeec
Q psy8774         300 LSGKVTVKVK  309 (427)
Q Consensus       300 ~s~~~~~~t~  309 (427)
                      +|.++.+.|.
T Consensus       325 WS~~~~~~t~  334 (380)
T 3lb6_C          325 WSDKQCWEGE  334 (380)
T ss_dssp             CCCC------
T ss_pred             CCCCEEEeCC
Confidence            7888888874

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}

Probab=99.92  E-value=1.5e-23  Score=191.89  Aligned_cols=256  Identities=16%  Similarity=0.183  Sum_probs=165.8

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEcc--CCCCcEEEEEEE
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSN--LEEGIEYSAEVQ  163 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~--L~p~t~Y~~~V~  163 (427)
                      .+|+++++...+ ..+.|+|+++.  +.++.+. |.|+|+..+ ...|...    ....+.+.+.+  |.+++.|.|+|+
T Consensus         5 ~~P~nv~~~~~n-~~~iL~W~pp~--~~~~~v~-Y~V~y~~~~-~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~   79 (306)
T 3s98_A            5 KSPQKVEVDIID-DNFILRWNRSD--ESVGNVT-FSFDYQKTG-MDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR   79 (306)
T ss_dssp             ---CCCEEEEET-TEEEEECC----------CE-EEEEEEESS-CSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEE
T ss_pred             CCCcEeEEEEEC-CeEEEEEcCCC--CCCCCeE-EEEEEEECC-CCCcEECCCccCCCCCEEEccccccCCCCcEEEEEE
Confidence            468999988764 56789999985  4445665 999999862 2334322    23456666654  689999999999


Q ss_pred             EeeCCCCCCCCCCeEEEcccc-cCCCCCceEEEeeeCcEEEEEeeeCCCC------CCceeEEEEEEEeccccccccccc
Q psy8774         164 AITKAGPGPWSPKLSLMTARD-MVRAPLGVKALATSDQSVEVWWKPVPAG------RGKILGYQIFYTMTAVEDLDEWSQ  236 (427)
Q Consensus       164 a~~~~g~~~~s~~~~~~t~~~-~p~~p~~l~~~~~~~~si~v~W~~p~~~------~g~i~~Y~I~~~~~~~~~~~~~~~  236 (427)
                      |.| .|.|+++....+.+... ++.+|. +.+... .++|.|+|+++...      +|.+.+|+|.|+..+...  .+  
T Consensus        80 A~n-~~~S~~s~~~~f~~~~~~~~~pP~-v~~~~~-~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~--~~--  152 (306)
T 3s98_A           80 AEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEAE-DKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGV--EE--  152 (306)
T ss_dssp             EEC-SSCEEEEECCCBCHHHHCBCCCCE-EEEEEC-SSCEEEEEECC---CCCC-----CCEEEEEEEETTTCC--CE--
T ss_pred             EEe-CCcCCCEeeeeEechhhCccCCCe-EEEEEc-CCEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCC--eE--
Confidence            999 77777766666666443 345554 787764 46899999965532      467899999999873321  12  


Q ss_pred             ccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEe--ccCCCCCccceEEeec---CC
Q psy8774         237 KSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAART--VNGLGRLSGKVTVKVK---PE  311 (427)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~--~~G~g~~s~~~~~~t~---~~  311 (427)
                                                 .  .....+.++|.+|.|++.|.|+|+|++  ..|.|++|..+.+.|.   |.
T Consensus       153 ---------------------------~--~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~  203 (306)
T 3s98_A          153 ---------------------------R--IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENEL  203 (306)
T ss_dssp             ---------------------------E--EEEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSS
T ss_pred             ---------------------------E--EecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcC
Confidence                                       1  122356899999999999999999999  6789999999998874   44


Q ss_pred             CCCcceEEeecCCCeEEEEecCCCcCCCceEEEEEe-he----e---ecceee------eeeEEEEeecccccccceEEE
Q psy8774         312 DVPLSLRAHDVSTHSMTLSWSPPIKLNPVKYKEVSE-KI----Q---ERRLQK------YGQYRYFETRDESYIGKRVER  377 (427)
Q Consensus       312 ~~P~~l~~~~~~~~~v~l~W~~P~~~~g~~Y~i~~~-~~----~---~~~l~~------~t~y~~~~~~~~~~~~~~~~~  377 (427)
                      .+|.++++... ++++.|+|++|. .+ .+|.+.+. .+    .   ...+.+      .....+.....+...+.|.||
T Consensus       204 ~~P~~v~~~~~-~~s~~l~W~~p~-~~-~~~~v~~~~gy~~~~~~~~~~~W~~~~~c~~~~~~~c~~~~~~~~~~~Y~~R  280 (306)
T 3s98_A          204 PPPENIEVSVQ-NQNYVLKWDYTY-AN-MTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLR  280 (306)
T ss_dssp             CCCEEEEEEEE-TTEEEEEEECSS-SS-CEEEEEEEEGGGGSCC----CCCEECGGGTTBSSSEEEEEGGGSCSSEEEEE
T ss_pred             CCCceEEEEEe-cCEEEEEeCCCC-Cc-EEEEEEEehhhhhccccccccCceECCCceeCCCccccCchhhcccCCEEEE
Confidence            67889998654 578999999986 33 35555433 11    1   111221      111122233334555689999


Q ss_pred             EEeecccCCCCc
Q psy8774         378 MEVRGRKGRGRP  389 (427)
Q Consensus       378 v~a~~~~g~g~p  389 (427)
                      |+|.|..|.|.-
T Consensus       281 V~A~n~~~~s~~  292 (306)
T 3s98_A          281 VQASDGNNTSFW  292 (306)
T ss_dssp             EEEECSSCBCCC
T ss_pred             EEEccCCCcccc
Confidence            999998887764

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A

Probab=99.92  E-value=2e-23  Score=180.83  Aligned_cols=179  Identities=21%  Similarity=0.333  Sum_probs=145.0

Q ss_pred             CCccceEEEEEeeCCCCC----CCcceEeEEEEEEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCccc
Q psy8774           3 KEEPEVTIELVWSQPTQT----YGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET   77 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~----~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~   77 (427)
                      ..+++++|.|+|++|...    ++.+.+|+|+|+..+...+.... ....+++.+.+|.|++.|.|+|+|.|..|.+..+
T Consensus        14 ~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S   93 (211)
T 3p4l_A           14 SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWS   93 (211)
T ss_dssp             EECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEESSSEEEECSCCTTCEEEEEEEEEETTEECCCC
T ss_pred             EecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCCceEEEecCcCCCCEEEEEEEEEcCCCCCccc
Confidence            456788999999997632    57889999999987655443333 6678899999999999999999999999988855


Q ss_pred             -ceEEeCCCCCCCCCCeeeEEEee--cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc--eE--EEeeeeeEEEEc
Q psy8774          78 -VRYYTTPEGPPTGPPANISHHFQ--TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN--VI--HRNTTQTKAVFS  150 (427)
Q Consensus        78 -~~~~~t~~~~p~~~p~~~~~~~~--~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~--~~--~~~~~~~~~~i~  150 (427)
                       ...+.|....|..+|.++.+...  +.+++.|+|++|  .+.+|.+.+|.|+|+.......  +.  ......+++.|.
T Consensus        94 ~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~  171 (211)
T 3p4l_A           94 MTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPP--SEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQ  171 (211)
T ss_dssp             CCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECC--TTCCSCCCEEEEEEESCTTSCGGGSEEEEEESSCSEEEEC
T ss_pred             eeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCC--CCCCCCEEEEEEEEEECCCCCCCceEEEEecCCeeEEEEc
Confidence             46778888888778999998887  478999999998  4577899999999997643322  12  233558899999


Q ss_pred             cCCCCcEEEEEEEEeeCCCCCCCCCCeEEEccc
Q psy8774         151 NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR  183 (427)
Q Consensus       151 ~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~  183 (427)
                      +|.|++.|.|+|+|.|..|.|++|..+.+.+..
T Consensus       172 ~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~  204 (211)
T 3p4l_A          172 ELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK  204 (211)
T ss_dssp             CCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred             CCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence            999999999999999999999999999998843

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=99.92  E-value=1.6e-23  Score=179.08  Aligned_cols=185  Identities=24%  Similarity=0.344  Sum_probs=148.3

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE-EEeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI-HRNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      +|.+|.++++...+.+++.|+|+++. ...+..+.+|.|+|+..+...... ......+++.+.+|.|++.|.|+|+|.|
T Consensus         5 ~P~~P~~l~~~~~~~~sv~l~W~~p~-~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~   83 (197)
T 3lpw_A            5 TPGPPQDLKVKEVTKTSVTLTWDPPL-LDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAEN   83 (197)
T ss_dssp             SCCCCEEEEEEEECSSCEEEEEECCS-CCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEEEE
T ss_pred             CCCCCCCcEEEEecCCEEEEEEcCCc-cCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEEEc
Confidence            45679999999999999999999984 122235889999999874322222 2235688999999999999999999999


Q ss_pred             CCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccc
Q psy8774         167 KAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESS  245 (427)
Q Consensus       167 ~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~  245 (427)
                      ..|.+.++....+.+...+|.+|.++.+...+.+++.|+|.+|...++ .+.+|.|+|+..+.   ..+           
T Consensus        84 ~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~---~~~-----------  149 (197)
T 3lpw_A           84 EYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGS---DKW-----------  149 (197)
T ss_dssp             TTEECCCEECSSCEESCCCCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTC---SCC-----------
T ss_pred             CccccCCCCCccceecCCCCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCC---Cce-----------
Confidence            999987777767777777889999999999999999999999876654 89999999987632   222           


Q ss_pred             cceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceE
Q psy8774         246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT  305 (427)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~  305 (427)
                                        ........+++++.+|.|++.|.|+|+|.|..|.|++|....
T Consensus       150 ------------------~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s~  191 (197)
T 3lpw_A          150 ------------------ATCATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSV  191 (197)
T ss_dssp             ------------------EEEEEESSSEEEECCCCTTCEEEEEEEEEETTEECCCEECSS
T ss_pred             ------------------EEeecccccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCcc
Confidence                              222334577899999999999999999999999988876543

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=99.91  E-value=1e-23  Score=185.69  Aligned_cols=207  Identities=24%  Similarity=0.351  Sum_probs=145.7

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCcccee-EeecCcceEEEcCCCCCceEEEEEEEEeccCcCccc-ceE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKEN-LVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET-VRY   80 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~-~~~   80 (427)
                      ..+++++|.|+|++|   ++.+.+|.|+|+..+...+.. ......+++.+.+|.|++.|.|+|+|.|..|.|..+ ...
T Consensus        15 ~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~   91 (234)
T 3f7q_A           15 KAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVS   91 (234)
T ss_dssp             EECSSSCEEEEEECC---SSCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEE
T ss_pred             EEcCCCEEEEEEECC---CCccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEE
Confidence            456788999999998   568999999999766544332 226778899999999999999999999999988766 566


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc----eEEEe---eeeeEEEEccCC
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN----VIHRN---TTQTKAVFSNLE  153 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~----~~~~~---~~~~~~~i~~L~  153 (427)
                      +.|....|. +|.++++...+.+++.|+|++|  ...+|.+.+|.|+|+.......    +....   ...+++.|.+|.
T Consensus        92 ~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~  168 (234)
T 3f7q_A           92 CRTHQEVPS-EPGRLAFNVVSSTVTQLSWAEP--AETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLR  168 (234)
T ss_dssp             EECCCCCCC-CCCCCEEEECSSSCEEEECCCC--SCCSSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECCC
T ss_pred             EEcCCCCCC-CCCccEEEEecCCEEEEEEcCC--CCCCCceeEEEEEEEECCCCCCccCcceEEEecCCcceEEEeCCCC
Confidence            777776664 5788999999999999999998  4567899999999998643321    11111   235789999999


Q ss_pred             CCcEEEEEEEEeeCCCCCCCCCC-eEEEcccccCC-CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEec
Q psy8774         154 EGIEYSAEVQAITKAGPGPWSPK-LSLMTARDMVR-APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMT  226 (427)
Q Consensus       154 p~t~Y~~~V~a~~~~g~~~~s~~-~~~~t~~~~p~-~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~  226 (427)
                      |++.|.|+|+|.|..|.|++|.. +.+.|...+|. +|....+..+..           ..+..+++|.+++++.
T Consensus       169 p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~~~P~~~~~~i~~~-----------~~g~~~~~~~~~~~~~  232 (234)
T 3f7q_A          169 ESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPIVDA-----------QSGEDYDSFLMYSDDV  232 (234)
T ss_dssp             TTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCCCCCCCTTCCEEET-----------TC--------------
T ss_pred             CCCeEEEEEEEECCCccCCCcCceeEeecCCCCCCCCccccceeeEEc-----------ccCcchheeeeehhhh
Confidence            99999999999999999988764 66777555443 333222211111           1234788898877653

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1

Probab=99.90  E-value=1.5e-22  Score=171.65  Aligned_cols=179  Identities=15%  Similarity=0.208  Sum_probs=134.0

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      ++.+|.++++...+.+++.|+|++|.     +.+.+|.|+|+..++...........+++.|.+|.|++.|.|+|+|.+.
T Consensus         6 ~p~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   80 (186)
T 1qr4_A            6 DLDNPKDLEVSDPTETTLSLRWRRPV-----AKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKG   80 (186)
T ss_dssp             --CCCEEEEEESCCSSEEEEEEECCS-----SCCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESS
T ss_pred             CCcCCCceEEEecCCCEEEEEEeCCC-----CCccEEEEEEEeCCCCeeEEECCCCCCEEEECCCCCCCEEEEEEEEEcC
Confidence            45679999999999999999999883     5788999999955221112222344789999999999999999999986


Q ss_pred             CCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccc
Q psy8774         168 AGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI  247 (427)
Q Consensus       168 ~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (427)
                      .|.+. ...+.+.+   .|.+|.++++...+.+++.|+|.+|.   +.+.+|.|.|+..+....  .             
T Consensus        81 ~~~s~-~~~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~--~-------------  138 (186)
T 1qr4_A           81 RHKSK-PTTIKGST---VVGSPKGISFSDITENSATVSWTPPR---SRVDSYRVSYVPITGGTP--N-------------  138 (186)
T ss_dssp             SCBCC-CEEEEEEC---CCCCCSCEEEESCCSSCEEEEECCCS---SCCSEEEEEEEETTCCCC--E-------------
T ss_pred             CccCC-CEEEEEEC---CCCCCCccEEEEeCCCEEEEEEECCC---CcccEEEEEEEeCCCCCc--e-------------
Confidence            55442 22333333   36788999999999999999999886   679999999988633111  1             


Q ss_pred             eeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                                      ........++++|.+|.|++.|.|+|+|.+..|.|.... ..+.|.|
T Consensus       139 ----------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~-~~~~T~p  184 (186)
T 1qr4_A          139 ----------------VVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPIS-GILKTAL  184 (186)
T ss_dssp             ----------------EEEEETTCCEEEECSCCSSCEEEEEEEEEETTEECCCEE-EEEEC--
T ss_pred             ----------------EEEcCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEE-EEEEecC
Confidence                            122345678999999999999999999999988776544 5555643

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A

Probab=99.90  E-value=1.6e-21  Score=186.84  Aligned_cols=356  Identities=13%  Similarity=0.144  Sum_probs=214.9

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecCc--cceeEe--e----------cCcceEEE--cCCCCCceEEEEEEEEec
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREHT--LKENLV--N----------SKNMSFLI--TNLERGVEYEFRIAGQNH   70 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~~~~~--~----------~~~~~~~~--~~L~p~t~Y~~~V~a~~~   70 (427)
                      ...|...|++..+... ...|.+.|+.....  ......  .          .....|.+  ..+.-...|.|+|.+.+.
T Consensus        16 ~~~~~C~W~~~~~~~~-~~~~~l~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~v~~~~~   94 (419)
T 2gys_A           16 TSHITCRWADTQDAQR-LVNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRP   94 (419)
T ss_dssp             SSEEEEEEEEEHHHHT-TCCEEEEEEEETTEEEECCEEECSCCTTSCCCSSSEEEEEEEEECSCCCTTCEEEEEEEESSC
T ss_pred             CEEEEEEeeCCcCCCC-cccEEEEeecCCcCCccceeccccCcccccCCCCCccccEeEeCCcceeeecccEEEEeCCcc
Confidence            3579999998753222 24588888753221  000000  0          00124444  566678899999999655


Q ss_pred             cCcCcccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCC----CcceeEEEEEEEEccCCCceE---EEeee
Q psy8774          71 IGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHR----NGQIVLYNVKFHKKIDANNVI---HRNTT  143 (427)
Q Consensus        71 ~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~----~~~i~~Y~v~~~~~~~~~~~~---~~~~~  143 (427)
                      .|.    ...+.....+.+.||.+|.+...+ +.+.|+|++|.....    .+....|.|+|+..+  ..+.   .....
T Consensus        95 ~~~----~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~--~~w~~~~~~~~~  167 (419)
T 2gys_A           95 LGT----RLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ--DSWEDAAILLSN  167 (419)
T ss_dssp             CCE----EEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT--SCSTTCEEEEES
T ss_pred             ccc----cceEcHHHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC--CChhheeeeccc
Confidence            443    234444455667789999988766 699999999964322    135678999999874  2221   21223


Q ss_pred             eeEEEEc--cCCCCcEEEEEEEEeeCCC---CC---CCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCc
Q psy8774         144 QTKAVFS--NLEEGIEYSAEVQAITKAG---PG---PWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGK  215 (427)
Q Consensus       144 ~~~~~i~--~L~p~t~Y~~~V~a~~~~g---~~---~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~  215 (427)
                      ...+.+.  +|.|++.|.|+|+|.+..|   .|   .+|..+.+.+..+.|.+|.++.+...+.+.+.+.|+++....+ 
T Consensus       168 ~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~~~~~l~c~W~~~~~~~~-  246 (419)
T 2gys_A          168 TSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVAS-  246 (419)
T ss_dssp             SSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEEECSSSEEEEEEEEEHHHHT-
T ss_pred             ceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEEECCceEEEeEEECCCCCCC-
Confidence            4556666  8999999999999998643   23   4578888999777788999999999888999999998742112 


Q ss_pred             eeEEEEEEEecccccc--cc-cccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEE
Q psy8774         216 ILGYQIFYTMTAVEDL--DE-WSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAAR  292 (427)
Q Consensus       216 i~~Y~I~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~  292 (427)
                      ..+|.|+|+.......  .. ...+........                  ..........+.+.+|.+.+.|.|+|.|.
T Consensus       247 ~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~------------------~~~~~~~~c~~~~~~l~~~~~y~i~V~a~  308 (419)
T 2gys_A          247 SVSFGLFYKPSPDAGSAVLLREEECSPVLREGL------------------GSLHTRHHCQIPVPDPATHGQYIVSVQPR  308 (419)
T ss_dssp             TCCEEEEEECC-----CCCCCCEECCCEEEECC------------------TTTEEEEEEEEECSCTTTCCEEEEEEEEC
T ss_pred             ceeEEEEEEecCccccccCcccccCCCcccccC------------------CCcceeEEeEEECccCCccCEEEEEEEEc
Confidence            2569999987632110  01 101100000000                  00000112356688899999999999997


Q ss_pred             eccCCCCCccceEEeecCCCCCcceEEeecCCCeEEEEecCCCc--CC-CceEEEEEeheeec-c---eeeeeeEEEEee
Q psy8774         293 TVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIK--LN-PVKYKEVSEKIQER-R---LQKYGQYRYFET  365 (427)
Q Consensus       293 ~~~G~g~~s~~~~~~t~~~~~P~~l~~~~~~~~~v~l~W~~P~~--~~-g~~Y~i~~~~~~~~-~---l~~~t~y~~~~~  365 (427)
                      +..|.-.....+     .+.|| .+.+.. ..+.+.|+|++|..  ++ .++|+|.+...... .   .........+.+
T Consensus       309 ~~~~~~~~~~~v-----~p~PP-~l~v~~-~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~w~~~~~~~~~~~~~~~l  381 (419)
T 2gys_A          309 RAEKHIKSSVNI-----QMAPP-SLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMAL  381 (419)
T ss_dssp             CCCEEEEGGGSB-----CCCCC-EEEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEEEESCSEEEC
T ss_pred             cCCccccceEEE-----EECCC-CeEEEE-eCCeEEEEECCCcccccccceEEEEEEEcCCCCcceeeccccccccEEEe
Confidence            544311111111     34455 466664 47899999999954  33 34999998643211 0   000011233467


Q ss_pred             cccccccceEEEEEeecccCCC-CcchhhhHH
Q psy8774         366 RDESYIGKRVERMEVRGRKGRG-RPKKRWMDC  396 (427)
Q Consensus       366 ~~~~~~~~~~~~v~a~~~~g~g-~p~~~~~~~  396 (427)
                      ..|++...|.|+|||.+.+|.+ -+.++|++.
T Consensus       382 ~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~  413 (419)
T 2gys_A          382 PALEPSTRYWARVRVRTSRTGYNGIWSEWSEA  413 (419)
T ss_dssp             CCCCSSCCCEEEEEEEECCTTCCBCCCCCCCC
T ss_pred             ccCCCCCeEEEEEEEEEcCCCCCCccCCCCCC
Confidence            8899999999999999988522 256777754

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*

Probab=99.90  E-value=1e-22  Score=191.83  Aligned_cols=300  Identities=14%  Similarity=0.106  Sum_probs=159.7

Q ss_pred             CceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEeec-CCEEEEEeeCCCC-CCCCcceeEEEEEEEEccCCC
Q psy8774          58 GVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQT-PDVVCITWDPPLR-THRNGQIVLYNVKFHKKIDAN  135 (427)
Q Consensus        58 ~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~-~~~v~v~W~~p~~-~~~~~~i~~Y~v~~~~~~~~~  135 (427)
                      ...|.+.+.+.+..|.+.....      .+++.||.++.+...+ .+++.|+|+++.. ...++.+..|.|.|+..+ ..
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~------~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~-~~   79 (380)
T 3lb6_C            7 AVGCLYTFLISTTFGCTSSSDT------EIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIG-SE   79 (380)
T ss_dssp             ------------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETT-CS
T ss_pred             ehhhhhhheeecccccccCCcc------cccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCC-CC
Confidence            3456667777777665532222      2345679999998766 6899999999964 224467889999999874 23


Q ss_pred             ceEEEeeeeeEEEEccCCCCcEEEEEEEEeeC----CCCCCCCCCeEEEc---c-cccCCCCCceEEEeeeCcEEEEEee
Q psy8774         136 NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK----AGPGPWSPKLSLMT---A-RDMVRAPLGVKALATSDQSVEVWWK  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~----~g~~~~s~~~~~~t---~-~~~p~~p~~l~~~~~~~~si~v~W~  207 (427)
                      .|.......+ ....++..+..|.|+|+|.+.    .|.|.+|......+   . ..||.+|.++.+...+.+.+.++|+
T Consensus        80 ~w~~~~~~~~-~~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~  158 (380)
T 3lb6_C           80 TWKTIITKNL-HYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWK  158 (380)
T ss_dssp             SCEEEEESSS-EEEEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEE
T ss_pred             cceEEEeccE-EEEEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEc
Confidence            3444333222 233455669999999999975    67776666555444   3 4567899999999999999999999


Q ss_pred             eCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceec--cCCCCCCeE
Q psy8774         208 PVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAEL--TSLEKFTEY  285 (427)
Q Consensus       208 ~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~L~p~t~Y  285 (427)
                      ++.. .+...+|.|+|+..+......+   ..                        .....+...++.+  .++.+++.|
T Consensus       159 p~~~-~~~~~~Y~l~y~~~~~~~~~~C---~~------------------------~~~~~g~~~~C~~~~~~~~~~~~Y  210 (380)
T 3lb6_C          159 PGIG-VLLDTNYNLFYWYEGLDHALQC---VD------------------------YIKADGQNIGCRFPYLEASDYKDF  210 (380)
T ss_dssp             CC-------CCEEEEEECTTCSSCEEC---SE------------------------EEEC--CEEEEECCCCTTCSSSCE
T ss_pred             CCCC-CCCCccEEEEEEECCCCccccC---CC------------------------ccccCCceEEEEeCCCcccceeEE
Confidence            8873 3567889999987632211111   00                        0001112223344  467889999


Q ss_pred             EEEEEEEeccCCCCCccceEEee---cCCCCCcceEEeecCCCeEEEEecCCCcCCC---ceEEEEEeheeecce---ee
Q psy8774         286 AVAVAARTVNGLGRLSGKVTVKV---KPEDVPLSLRAHDVSTHSMTLSWSPPIKLNP---VKYKEVSEKIQERRL---QK  356 (427)
Q Consensus       286 ~~~V~a~~~~G~g~~s~~~~~~t---~~~~~P~~l~~~~~~~~~v~l~W~~P~~~~g---~~Y~i~~~~~~~~~l---~~  356 (427)
                      .|+|.|.|..|.+..+. +.+.+   .++.||.++++...+.+++.|+|++|...++   ++|+|.+..- ....   ..
T Consensus       211 ~i~V~a~n~~G~~~s~~-~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~-~~~w~~~~~  288 (380)
T 3lb6_C          211 YICVNGSSENKPIRSSY-FTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIRED-DTTLVTATV  288 (380)
T ss_dssp             EEEEEEC-----CCCEE-EEECGGGSCCCCCCEEEEEC-------CEEEECCSSSCCSTTEEEEECC---------CCEE
T ss_pred             EEEEEEEcCCeeecccc-EEEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCCCCCcceEEEEEEEEeC-CCCceEecc
Confidence            99999999887665433 55553   2567888999987788899999999986543   4999987652 1111   11


Q ss_pred             eeeEEEEeecc-cccccceEEEEEeecccC--CCCcchhhhHHHH
Q psy8774         357 YGQYRYFETRD-ESYIGKRVERMEVRGRKG--RGRPKKRWMDCVN  398 (427)
Q Consensus       357 ~t~y~~~~~~~-~~~~~~~~~~v~a~~~~g--~g~p~~~~~~~~~  398 (427)
                      .+.  + .... |++...|.|+|||....+  .+...++|++...
T Consensus       289 ~~~--~-~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~  330 (380)
T 3lb6_C          289 ENE--T-YTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQC  330 (380)
T ss_dssp             SSS--C-C------------CCEEEEECTTTCSSCCCCCCCCC--
T ss_pred             cce--E-EEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEE
Confidence            112  2 2445 889999999999996643  2234677776543

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=99.90  E-value=1.5e-22  Score=175.54  Aligned_cols=179  Identities=16%  Similarity=0.192  Sum_probs=142.0

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecC-ccceeEee-------------cCcceEEEcCCCCCceEEEEEEEE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREH-TLKENLVN-------------SKNMSFLITNLERGVEYEFRIAGQ   68 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~~~-------------~~~~~~~~~~L~p~t~Y~~~V~a~   68 (427)
                      ..+++++|.|+|++|.+.++.+.+|.|+|+..+. ..|.....             ....++.+.+|.|++.|.|+|+|.
T Consensus        11 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~   90 (214)
T 2ibg_A           11 TRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAV   90 (214)
T ss_dssp             EEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEEEEEEEEE
T ss_pred             eEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEEEEEEEEE
Confidence            3467899999999998767899999999998654 45654321             356789999999999999999999


Q ss_pred             eccCcCcccc--eEEeCC---CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEee-
Q psy8774          69 NHIGYGQETV--RYYTTP---EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT-  142 (427)
Q Consensus        69 ~~~g~~~~~~--~~~~t~---~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-  142 (427)
                      |..|.+..+.  ..+.+.   ...++.+|.++.+...+.+++.|+|+++. .+.++.+.+|.|+|+..+....+..... 
T Consensus        91 n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~  169 (214)
T 2ibg_A           91 YSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLAS-DADEHLITGYYAYYRPSSSAGEYFKATIE  169 (214)
T ss_dssp             ETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCT-TCCGGGCCEEEEEEEETTCCSCCEEEEEE
T ss_pred             ecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCC-ccCCCCcceEEEEEEECCCCcceEEeecc
Confidence            9999776443  223332   23345578899888889999999999996 4677899999999998754233433322 


Q ss_pred             --eeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         143 --TQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       143 --~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                        ..+++.|.+|.|++.|.|+|+|.|..|.|++|..+.++|.
T Consensus       170 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~  211 (214)
T 2ibg_A          170 GAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQ  211 (214)
T ss_dssp             CTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred             CCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEec
Confidence              2689999999999999999999999999999999999884

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=99.90  E-value=1.7e-22  Score=175.50  Aligned_cols=192  Identities=17%  Similarity=0.189  Sum_probs=144.7

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE-EeeeeeEEEEccC-CCCcEEEEEEEE
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH-RNTTQTKAVFSNL-EEGIEYSAEVQA  164 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~i~~L-~p~t~Y~~~V~a  164 (427)
                      .|+.+|.+|.+...+.+++.|+|+++.  +. +...+|.|+|+.......... .....+++.|.+| .+++.|.|+|.|
T Consensus         6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~--~~-~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A   82 (215)
T 1bqu_A            6 LPPEKPKNLSCIVNEGKKMRCEWDGGR--ET-HLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEA   82 (215)
T ss_dssp             CCCCCCEEEEEEEETTSCCEEEEECCS--CC-SSCCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEE
T ss_pred             CCCCCCEeeEeEECCCCcEEEEcCCCC--CC-CCCceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEEE
Confidence            466789999999988899999999995  22 234799999987632211111 1234689999999 999999999999


Q ss_pred             eeCCCCCCCCCCeEEEc-ccccCCCCCceEEEee--eCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccc
Q psy8774         165 ITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALAT--SDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPL  241 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~--~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~  241 (427)
                      .|..|.+. +....+.+ ...+|.+|.++.+...  +.+++.|+|++|...++.+.+|+|+|+..+   ...|....   
T Consensus        83 ~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~---~~~~~~~~---  155 (215)
T 1bqu_A           83 ENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKD---ASTWSQIP---  155 (215)
T ss_dssp             EETTEEEE-CCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETT---CSSCEECC---
T ss_pred             EecccCcc-CCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCC---CCCceEec---
Confidence            99999874 55666655 3356789999998775  678999999999876778999999999873   22231000   


Q ss_pred             cccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCC---CccceEEeecC
Q psy8774         242 TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR---LSGKVTVKVKP  310 (427)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~---~s~~~~~~t~~  310 (427)
                                            ........++++|.+|.|++.|.|+|+|.|..|.|.   +|..+.++|.+
T Consensus       156 ----------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~  205 (215)
T 1bqu_A          156 ----------------------PEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE  205 (215)
T ss_dssp             ----------------------GGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred             ----------------------cccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccc
Confidence                                  001245567899999999999999999999988766   56677777743

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A

Probab=99.90  E-value=1.7e-21  Score=167.55  Aligned_cols=172  Identities=18%  Similarity=0.286  Sum_probs=136.4

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--EeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      +|.++.+...+.+++.|+|+++.    ++.+.+|.|+|+..+.......  .....+++.|.+|.|++.|.|+|+|.+..
T Consensus        25 ~P~~l~~~~~~~~sv~lsW~~p~----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  100 (203)
T 2gee_A           25 QPTDLSFVDITDSSIGLRWTPLN----SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNG  100 (203)
T ss_dssp             CCEEEEEECCTTTCEEEEEECCS----SSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEESSS
T ss_pred             CCCccEEEecCCCEEEEEecCCC----CCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEEeCC
Confidence            68899999999999999999984    2578899999998744333222  23558899999999999999999999977


Q ss_pred             CCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccce
Q psy8774         169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA  248 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (427)
                      |.+   ....+.+...+| +|.++++...+.+++.|+|++|.  ++.+.+|.|+|+......  .+.             
T Consensus       101 g~s---~~~~~~t~~~~p-~P~~l~~~~~~~~sv~l~W~~p~--~~~i~~Y~v~~~~~~~~~--~~~-------------  159 (203)
T 2gee_A          101 GES---TPTTLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEE--DVA-------------  159 (203)
T ss_dssp             CBC---CCEEEEEECCCC-CCEEEEEEEEETTEEEEEEECCS--SCCCSEEEEEEEETTCGG--GCE-------------
T ss_pred             Ccc---ccEeeeecCCCc-CCCceEEEEcCCCEEEEEEcCCC--CCCccEEEEEEEECCCCC--ccE-------------
Confidence            665   445566655555 89999999999999999999996  468999999999853221  110             


Q ss_pred             eEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                                     ........++++|.+|.|++.|.|+|+|.+..|.|..+.
T Consensus       160 ---------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~  198 (203)
T 2gee_A          160 ---------------ELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR  198 (203)
T ss_dssp             ---------------EEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             ---------------EEEcCCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCee
Confidence                           112345678999999999999999999999998887654

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=99.90  E-value=2.7e-22  Score=171.37  Aligned_cols=174  Identities=23%  Similarity=0.331  Sum_probs=137.7

Q ss_pred             CCccceEEEEEeeCCCCCCC-cceEeEEEEEEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce-
Q psy8774           3 KEEPEVTIELVWSQPTQTYG-EILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR-   79 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~-   79 (427)
                      ...+.++|.|+|++|...++ ++.+|.|+|+..+...|.... ....+++.+.+|.|++.|.|+|+|.+..|.+..+.. 
T Consensus        15 ~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~   94 (197)
T 3lpw_A           15 KEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAENEYGIGLPAETA   94 (197)
T ss_dssp             EEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEEEETTEECCCEECS
T ss_pred             EEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEEEcCccccCCCCCc
Confidence            34678899999999864344 589999999988777776655 668899999999999999999999999998875532 


Q ss_pred             EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEE
Q psy8774          80 YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYS  159 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~  159 (427)
                      ...+... ++.+|.++.+...+.+++.|+|.+|. ...++.+.+|.|+|+..+............+++.+.+|.|++.|.
T Consensus        95 ~~~t~~~-~p~~p~~~~~~~~~~~~v~l~W~~p~-~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~  172 (197)
T 3lpw_A           95 ESVKASE-RPLPPGKITLMDVTRNSVSLSWEKPE-HDGGSRILGYIVEMQTKGSDKWATCATVKVTEATITGLIQGEEYS  172 (197)
T ss_dssp             SCEESCC-CCCCCSCEEEEEECSSCEEEEECCCS-CCTTSCCCEEEEEEEETTCSCCEEEEEESSSEEEECCCCTTCEEE
T ss_pred             cceecCC-CCCCCcccEEEeccCCeEEEEecCCC-cCCCCcccEEEEEEEeCCCCceEEeecccccEEEeCCcCCCCEEE
Confidence            3334334 44578899999899999999999984 223348999999999874433333345668899999999999999


Q ss_pred             EEEEEeeCCCCCCCCCCeE
Q psy8774         160 AEVQAITKAGPGPWSPKLS  178 (427)
Q Consensus       160 ~~V~a~~~~g~~~~s~~~~  178 (427)
                      |+|+|.|..|.|++|....
T Consensus       173 ~~V~A~n~~G~s~~S~~s~  191 (197)
T 3lpw_A          173 FRVSAQNEKGISDPRQLSV  191 (197)
T ss_dssp             EEEEEEETTEECCCEECSS
T ss_pred             EEEEEEeCCccCCCccCcc
Confidence            9999999999987665443

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=99.89  E-value=7.1e-21  Score=180.43  Aligned_cols=227  Identities=18%  Similarity=0.174  Sum_probs=171.8

Q ss_pred             CcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEE
Q psy8774          46 KNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYN  125 (427)
Q Consensus        46 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~  125 (427)
                      ....+.|.++.....+.|++.|.|..|..........   ..++.+|..+.+...+.+.+.|+|.++. ...+.++.+|.
T Consensus       156 ~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v---~~~P~~P~~~~~~~~~~~~~~l~w~~p~-~~~g~pi~~y~  231 (389)
T 2jll_A          156 RKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILAL---ADVPSSPYGVKIIELSQTTAKVSFNKPD-SHGGVPIHHYQ  231 (389)
T ss_dssp             SCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEE---CCCCCCCEEEEEEEECSSCEEEEEECCS-CCTTSCEEEEE
T ss_pred             CEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEe---cCCCCCCcceEEeeccCCEEEEEEeCCC-CCCCcceEEEE
Confidence            3457899999999999999999999887543322222   2234568788888888899999999874 23334788999


Q ss_pred             EEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccc-cCCCCCceEEEeeeCcEE
Q psy8774         126 VKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD-MVRAPLGVKALATSDQSV  202 (427)
Q Consensus       126 v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~-~p~~p~~l~~~~~~~~si  202 (427)
                      |+|+..+. ..+....  .....+.|.+|.+++.|.|+|.|.|..|.+.+|....+.+... +|.+| .+.....+.+++
T Consensus       232 v~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p-~~~~~~~~~~~v  309 (389)
T 2jll_A          232 VDVKEVAS-EIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPP-SIHGQPSSGKSF  309 (389)
T ss_dssp             EEEEETTC-SCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCC-CEEEEEETTTEE
T ss_pred             EEEEECCC-cccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCC-ccccccCcCCEE
Confidence            99998733 2333222  2357899999999999999999999999998898888888544 56666 467777789999


Q ss_pred             EEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCC
Q psy8774         203 EVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKF  282 (427)
Q Consensus       203 ~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~  282 (427)
                      .|+|.+|...++.+.+|.|+|+..+.   ..|..                           ........++++|.+|.|+
T Consensus       310 ~l~W~~p~~~~~~i~~Y~v~~~~~~~---~~~~~---------------------------~~~~~~~~~~~~i~~L~~~  359 (389)
T 2jll_A          310 KLSITKQDDGGAPILEYIVKYRSKDK---EDQWL---------------------------EKKVQGNKDHIILEHLQWT  359 (389)
T ss_dssp             EEEECCCCCCSSCCCEEEEEEEC--------CCB---------------------------CCEECTTCCEEEECSCCTT
T ss_pred             EEEEECCCCCCCcccEEEEEEEeCCC---Cccee---------------------------EeeccCCcceEEeCCcCCC
Confidence            99999988777899999999987522   22200                           1123355678999999999


Q ss_pred             CeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         283 TEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       283 t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                      +.|.|+|+|.|..|.|.+|. +.++|.
T Consensus       360 t~Y~~~V~A~n~~G~s~~s~-~~~~T~  385 (389)
T 2jll_A          360 MGYEVQITAANRLGYSEPTV-YEFSMP  385 (389)
T ss_dssp             CEEEEEEEEEC-CCBCCCEE-EEEECC
T ss_pred             CEEEEEEEEEcCCcCCCcee-eEecCC
Confidence            99999999999999999987 477774

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A

Probab=99.89  E-value=6.9e-22  Score=181.00  Aligned_cols=228  Identities=17%  Similarity=0.169  Sum_probs=160.0

Q ss_pred             cceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEE
Q psy8774          47 NMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNV  126 (427)
Q Consensus        47 ~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v  126 (427)
                      ..++.|.++... .-.+.+.|.+. |...............|+.+|.++.+...+.+++.|+|+++.  +. +.+.+|.|
T Consensus        64 ~~~L~i~~~~~~-~g~Y~C~a~~~-g~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~--~~-~~~~~Y~v  138 (303)
T 1i1r_A           64 ASSVTFTDIASL-NIQLTCNILTF-GQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGR--ET-HLETNFTL  138 (303)
T ss_dssp             EEEEEECSCCCS-EEEEEEEEEET-TTEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCS--CC-SSCCEEEE
T ss_pred             EEEEEEcCcCCC-ceEEEEecccC-CCcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCC--CC-CCCcCEEE
Confidence            456888888764 34556666553 322111111112223466789999998888899999999984  32 34579999


Q ss_pred             EEEEccCCCceEEE--eeeeeEEEEccC-CCCcEEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEee--eCc
Q psy8774         127 KFHKKIDANNVIHR--NTTQTKAVFSNL-EEGIEYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALAT--SDQ  200 (427)
Q Consensus       127 ~~~~~~~~~~~~~~--~~~~~~~~i~~L-~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~--~~~  200 (427)
                      +|+..... .+...  ....+++.|.+| .|++.|.|+|.|.|..|.+. +....+.+ ...+|.+|.++.+...  +.+
T Consensus       139 ~~~~~~~~-~~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~-s~~~~~~~~~~~~p~pP~~~~v~~~~~~~~  216 (303)
T 1i1r_A          139 KSEWATHK-FADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSS  216 (303)
T ss_dssp             EEEETTEE-CCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEE-CCCEEECGGGGEECCCCEEEEEECCSSSSS
T ss_pred             EEEecCCC-CccCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCCcc-cCCEEECHHHeEecCCCcceEEEEecCCCC
Confidence            99876221 11121  234688999999 99999999999999999874 44555544 3357789999988765  668


Q ss_pred             EEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCC
Q psy8774         201 SVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLE  280 (427)
Q Consensus       201 si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~  280 (427)
                      ++.|+|++|...++.+.+|+|+|+..+   ...|....                         ........++++|.+|.
T Consensus       217 sv~l~W~~p~~~~~~i~~Y~v~y~~~~---~~~w~~~~-------------------------~~~~~~~~~~~~l~~L~  268 (303)
T 1i1r_A          217 ILKLTWTNPSIKSVIILKYNIQYRTKD---ASTWSQIP-------------------------PEDTASTRSSFTVQDLK  268 (303)
T ss_dssp             CEEEEEECCGGGGTSCEEEEEEEEETT---CSSCEECC-------------------------GGGGCSCCSEEEECSCC
T ss_pred             EEEEEECCCCCCCcccEEEEEEEEeCC---CCCceEEc-------------------------cccCCCceeEEEeCCCC
Confidence            999999999876788999999999873   23331000                         00013456789999999


Q ss_pred             CCCeEEEEEEEEeccCCCCCc---cceEEeec
Q psy8774         281 KFTEYAVAVAARTVNGLGRLS---GKVTVKVK  309 (427)
Q Consensus       281 p~t~Y~~~V~a~~~~G~g~~s---~~~~~~t~  309 (427)
                      |++.|.|+|+|.|..|.|.+|   ..+.++|.
T Consensus       269 p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~  300 (303)
T 1i1r_A          269 PFTEYVFRIRCMKEDGKGYWSDWSEEASGITY  300 (303)
T ss_dssp             TTCEEEEEEEEEETTSCSCCCCCCCCEEEECC
T ss_pred             CCCEEEEEEEeccCCCCCCcCCCCCccceeCC
Confidence            999999999999999877665   56667763

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=99.89  E-value=6.4e-22  Score=170.98  Aligned_cols=171  Identities=16%  Similarity=0.179  Sum_probs=136.9

Q ss_pred             EEEEEeeCCCCCCC-cceEeEEEEEEecCccceeEee-----cCcceEEEcCCCCCceEEEEEEEEeccCcCcccc-eEE
Q psy8774           9 TIELVWSQPTQTYG-EILGYRVKYGVREHTLKENLVN-----SKNMSFLITNLERGVEYEFRIAGQNHIGYGQETV-RYY   81 (427)
Q Consensus         9 sv~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~-~~~   81 (427)
                      ++.|+|++|.+.++ ++.+|.|+|+..+...|.....     ...+++.+.+|.|++.|.|+|+|.|..|.|..+. ..+
T Consensus        23 s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~  102 (209)
T 2vkw_A           23 TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEF  102 (209)
T ss_dssp             CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEE
T ss_pred             eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccc
Confidence            68999999975555 4999999999887777765541     2357999999999999999999999999988664 346


Q ss_pred             eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-EEEeeeeeEEEEccCCCCcEEEE
Q psy8774          82 TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-IHRNTTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~  160 (427)
                      .|....++.+|..+.+...+.+++.|+|.+|  .+.++.+.+|.|+|+........ .......+++.|.+|.|++.|.|
T Consensus       103 ~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~  180 (209)
T 2vkw_A          103 KTQPVREPSAPKLEGQMGEDGNSIKVNLIKQ--DDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEV  180 (209)
T ss_dssp             ECCCSCSCCCCEEEEEECTTSSCEEEEEECC--CCTTSCCCEEEEEEEETTSCCCCCEEECTTCCEEEECSCCTTCEEEE
T ss_pred             cccCCCCCCCCcccccccccCCeEEEEEECc--ccCCCCCceEEEEEECCCCCCceeeecCCCccEEEecCCCCCCEEEE
Confidence            6665534567888888888999999999998  56778999999999983211111 22234468899999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t  181 (427)
                      +|+|.|..|.|.+|....+.+
T Consensus       181 ~V~A~n~~G~s~~S~~~~~~~  201 (209)
T 2vkw_A          181 YVVAENQQGKSKAAHFVFRTA  201 (209)
T ss_dssp             EEEEEETTEECCCEEEEEECC
T ss_pred             EEEEEeCCccCCcchhhhhhh
Confidence            999999999998887777665

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*

Probab=99.88  E-value=8.3e-21  Score=174.69  Aligned_cols=270  Identities=13%  Similarity=0.105  Sum_probs=174.5

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEee-CC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAIT-KA  168 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~-~~  168 (427)
                      .||.+|++.....+.+.|+|++|.. ..++.+.+|.|.+...  ... .   .....+.+.+|.++..|.|+|+|.. ..
T Consensus         5 ~pP~nl~~~~~~~~~v~l~W~pP~~-~~~~~~~~Y~v~~~~~--~~~-~---~~~~~~~~~~~~~~~~y~~~V~a~~~~~   77 (314)
T 3bpo_C            5 PPVTNLSVSVENLCTVIWTWNPPEG-ASSNCSLWYFSHFGDK--QDK-K---IAPETRRSIEVPLNERICLQVGSQCSTN   77 (314)
T ss_dssp             CCCEEEEEEEETTTEEEEEEECCSS-CCCSSCCCEEECCC----CCC-E---EESSSEEEEECCCSSCEEEEEEECC---
T ss_pred             CCCcceEEEeCCceEEEEEEcCCCC-CCCCceEEEEEEeccc--Cce-E---eccccEEEEEEcCCCcEEEEEEEEecCC
Confidence            5789999998889999999999753 3356677999987542  111 1   1233456678999999999999964 56


Q ss_pred             CCCCCCCCeEEEc---ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccc
Q psy8774         169 GPGPWSPKLSLMT---ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS  245 (427)
Q Consensus       169 g~~~~s~~~~~~t---~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~  245 (427)
                      |.|..+..+....   ...+|.+|.++.+...+.+++.++|+++... +.+.+|.|+|+..+.   ..+..+.       
T Consensus        78 ~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~-~~~~~Y~l~y~~~~~---~~~~~C~-------  146 (314)
T 3bpo_C           78 ESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNT-SPDTNYTLYYWHRSL---EKIHQCE-------  146 (314)
T ss_dssp             ------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC----CCCCEEEEEEESSC---SSCEECC-------
T ss_pred             CCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCC-CCCccEEEEEEeCCC---CccccCc-------
Confidence            6666677665332   3356678999999998899999999998743 568899999987521   1111110       


Q ss_pred             cceeEEeeeccccccccccccccCCCCceeccCCC----CCCeEEEEEEEEeccCCCCCccceEEee---cCCCCCcceE
Q psy8774         246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLE----KFTEYAVAVAARTVNGLGRLSGKVTVKV---KPEDVPLSLR  318 (427)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~----p~t~Y~~~V~a~~~~G~g~~s~~~~~~t---~~~~~P~~l~  318 (427)
                                        .....+....+.+..+.    ..+.|.|+|.|.|..|.+..+. +.+.+   ..+.||.+|+
T Consensus       147 ------------------~~~~~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~~-~~~~~~~~v~P~pP~~l~  207 (314)
T 3bpo_C          147 ------------------NIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSF-NIVPLTSRVKPDPPHIKN  207 (314)
T ss_dssp             ------------------CEEEETTEEEEEEECCC--------CCEEEEEEETTSCSCCEE-EEECSSSSEECCCCEEEE
T ss_pred             ------------------CeecCCCeEEEEECCCCccccceeEEEEEEEEEcCCCceeccc-EEEehhheEeeCCCCEEE
Confidence                              00111223455566554    4789999999999998876553 55542   2357899999


Q ss_pred             EeecCCCeEEEEecCCCcCCC--ceEEEEEeheeecceee----------------eeeEEEEeecccccccceEEEEEe
Q psy8774         319 AHDVSTHSMTLSWSPPIKLNP--VKYKEVSEKIQERRLQK----------------YGQYRYFETRDESYIGKRVERMEV  380 (427)
Q Consensus       319 ~~~~~~~~v~l~W~~P~~~~g--~~Y~i~~~~~~~~~l~~----------------~t~y~~~~~~~~~~~~~~~~~v~a  380 (427)
                      +. ...+++.|+|++|...++  ++|+|.+........+.                ...-..+.+.+|.+...|.|+|||
T Consensus       208 ~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra  286 (314)
T 3bpo_C          208 LS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRV  286 (314)
T ss_dssp             EE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEE
T ss_pred             EE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEEe
Confidence            97 778899999999985443  59999987543322211                012223366889999999999999


Q ss_pred             ecccCCC---CcchhhhHHH
Q psy8774         381 RGRKGRG---RPKKRWMDCV  397 (427)
Q Consensus       381 ~~~~g~g---~p~~~~~~~~  397 (427)
                      .+..+.|   ...++|++.+
T Consensus       287 ~~~~~~~~~~g~WS~WS~~~  306 (314)
T 3bpo_C          287 KTNKLCYEDDKLWSNWSQEM  306 (314)
T ss_dssp             EECTTTSCCCCCCCCCCCCE
T ss_pred             eecccccCCCCeeCCCCCCe
Confidence            9976533   2356677643

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}

Probab=99.88  E-value=1.1e-21  Score=168.41  Aligned_cols=175  Identities=15%  Similarity=0.227  Sum_probs=131.0

Q ss_pred             CCeeeEEEeec--CCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE--eeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          91 PPANISHHFQT--PDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--NTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        91 ~p~~~~~~~~~--~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      +|.+|++...+  .+++.|+|++|.    ++.+.+|.|+|+.......+...  ....+++.|.+|.|++.|.|+|+|.|
T Consensus         2 ~P~~l~v~~v~~~~~si~l~W~~p~----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n   77 (201)
T 2ha1_A            2 GPVEVFITETPSQPNSHPIQWNAPQ----PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQ   77 (201)
T ss_dssp             CCCEEECCSCSCCSSCEEEEEECCS----STTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEEC
T ss_pred             CceeEEEEecCCCCCEEEEEEeCCC----CCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEe
Confidence            47899888877  999999999982    46899999999976433333332  24478999999999999999999999


Q ss_pred             CCCCCCCCCCeEEEcccc------------cCCCC----CceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccc
Q psy8774         167 KAGPGPWSPKLSLMTARD------------MVRAP----LGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVED  230 (427)
Q Consensus       167 ~~g~~~~s~~~~~~t~~~------------~p~~p----~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~  230 (427)
                      ..|.|..+ .+.+.+...            +..+|    .++++...+.+++.|+|.+|.   +.+.+|.|+|+......
T Consensus        78 ~~G~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~  153 (201)
T 2ha1_A           78 QYGHQEVT-RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSAS---DTVSGFRVEYELSEEGD  153 (201)
T ss_dssp             TTSCEEEE-EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCSC---TTEEEEEEEEEETTTCC
T ss_pred             cccccCce-eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCCC---CCccEEEEEEEECCCCC
Confidence            98887543 334433211            11222    567888888999999999985   68999999998652211


Q ss_pred             ccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc
Q psy8774         231 LDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK  303 (427)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~  303 (427)
                      ...                              ........++++|.+|.|++.|.|+|+|+|..|.|.....
T Consensus       154 ~~~------------------------------~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~s~  196 (201)
T 2ha1_A          154 EPQ------------------------------YLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLILS  196 (201)
T ss_dssp             CCE------------------------------EEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEEEE
T ss_pred             cee------------------------------EEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccEee
Confidence            111                              1223456789999999999999999999999998876653

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=99.88  E-value=4.9e-22  Score=172.49  Aligned_cols=180  Identities=18%  Similarity=0.234  Sum_probs=138.4

Q ss_pred             ccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcCC-CCCceEEEEEEEEeccCcCcccceEEe
Q psy8774           5 EPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNL-ERGVEYEFRIAGQNHIGYGQETVRYYT   82 (427)
Q Consensus         5 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L-~p~t~Y~~~V~a~~~~g~~~~~~~~~~   82 (427)
                      .+.++|.|+|+++.+.++ ..+|.|+|+..++..+.... ....+++.+.+| .+++.|.|+|.|.|..|.+......+.
T Consensus        19 ~~~~sv~l~W~~p~~~~~-~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~s~~~~~~   97 (215)
T 1bqu_A           19 NEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFD   97 (215)
T ss_dssp             ETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEEC
T ss_pred             CCCCcEEEEcCCCCCCCC-CceEEEEEEEcCCCccccccccCCcceEEEcCCccccccEEEEEEEEecccCccCCcEEec
Confidence            345789999999986543 47999999876543333332 456789999999 999999999999999998864445555


Q ss_pred             CCCCCCCCCCeeeEEEee--cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-----eeeeeEEEEccCCCC
Q psy8774          83 TPEGPPTGPPANISHHFQ--TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-----NTTQTKAVFSNLEEG  155 (427)
Q Consensus        83 t~~~~p~~~p~~~~~~~~--~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~~~~~~~~i~~L~p~  155 (427)
                      +....++.+|.++.+...  +.+++.|+|++|.  ..++.+.+|.|+|+... ...+...     ....+++.|.+|.|+
T Consensus        98 ~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~y~~~~-~~~~~~~~~~~~~~~~~~~~i~~L~p~  174 (215)
T 1bqu_A           98 PVYKVKPNPPHNLSVINSEELSSILKLTWTNPS--IKSVIILKYNIQYRTKD-ASTWSQIPPEDTASTRSSFTVQDLKPF  174 (215)
T ss_dssp             GGGSEECCCCEEEEEECC--CCSCEEEEEECCG--GGGTSCEEEEEEEEETT-CSSCEECCGGGGCSCCSEEEECSCCSS
T ss_pred             ccccCcCCCCCceEEEEecCCCceEEEEEeCCC--CCCcceEEEEEEEccCC-CCCceEeccccccCccceEEeCCCCCC
Confidence            544456678999988765  7789999999984  45577999999999874 2334333     345789999999999


Q ss_pred             cEEEEEEEEeeCCCCCC---CCCCeEEEcccccCCC
Q psy8774         156 IEYSAEVQAITKAGPGP---WSPKLSLMTARDMVRA  188 (427)
Q Consensus       156 t~Y~~~V~a~~~~g~~~---~s~~~~~~t~~~~p~~  188 (427)
                      +.|.|+|+|.|..|.|.   +|..+.++|.+++|..
T Consensus       175 t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~P~~  210 (215)
T 1bqu_A          175 TEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSK  210 (215)
T ss_dssp             EEEEEEEEEEETTSCSCCCCCCCCEEEEECCCHHHH
T ss_pred             CEEEEEEEEccCCCCCccCCCCCcccccccccCCcC
Confidence            99999999999988865   6677888887665543

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1

Probab=99.87  E-value=9.1e-21  Score=160.53  Aligned_cols=167  Identities=20%  Similarity=0.353  Sum_probs=129.4

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEE
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYY   81 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~   81 (427)
                      +..+++++|.|+|.+|   .+.+.+|.|+|+..++...........+++.+.+|.|++.|.|+|+|.+..|.+.+....+
T Consensus        15 ~~~~~~~sv~l~W~~p---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~   91 (186)
T 1qr4_A           15 VSDPTETTLSLRWRRP---VAKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKG   91 (186)
T ss_dssp             EESCCSSEEEEEEECC---SSCCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEE
T ss_pred             EEecCCCEEEEEEeCC---CCCccEEEEEEEeCCCCeeEEECCCCCCEEEECCCCCCCEEEEEEEEEcCCccCCCEEEEE
Confidence            3467889999999998   4578999999985543322223366788999999999999999999999877776666666


Q ss_pred             eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-EEEeeeeeEEEEccCCCCcEEEE
Q psy8774          82 TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-IHRNTTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~  160 (427)
                      .+.    +.+|.++++...+.+++.|+|.+|.     +.+.+|.|+|+..+.+... .......+++.|.+|.|++.|.|
T Consensus        92 ~t~----p~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~  162 (186)
T 1qr4_A           92 STV----VGSPKGISFSDITENSATVSWTPPR-----SRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNV  162 (186)
T ss_dssp             ECC----CCCCSCEEEESCCSSCEEEEECCCS-----SCCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEE
T ss_pred             ECC----CCCCCccEEEEeCCCEEEEEEECCC-----CcccEEEEEEEeCCCCCceEEEcCCCcCEEEEcCCCCCCEEEE
Confidence            664    3567899999889999999999884     5789999999987432222 23335589999999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t  181 (427)
                      +|+|.+..|.|. .....+.|
T Consensus       163 ~V~A~~~~g~s~-p~~~~~~T  182 (186)
T 1qr4_A          163 NIISVKGFEESE-PISGILKT  182 (186)
T ss_dssp             EEEEEETTEECC-CEEEEEEC
T ss_pred             EEEEEcCCCcCc-CEEEEEEe
Confidence            999999887763 23334444

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=99.87  E-value=7.9e-21  Score=184.14  Aligned_cols=185  Identities=22%  Similarity=0.268  Sum_probs=138.8

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCc-ceeEEEEEEEEccCCCc--------eEE----EeeeeeEEEEccCCC
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNG-QIVLYNVKFHKKIDANN--------VIH----RNTTQTKAVFSNLEE  154 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~-~i~~Y~v~~~~~~~~~~--------~~~----~~~~~~~~~i~~L~p  154 (427)
                      |+.+|.++. ...+.+++.|+|++|.  +.+| .+.+|.|+|+.......        ...    .....+++.|.+|.|
T Consensus       333 pPsaP~nl~-~~vs~tSv~LsW~pP~--~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P  409 (536)
T 3fl7_A          333 PPSAPHYLT-AVGMGAKVELRWTPPQ--DSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEP  409 (536)
T ss_dssp             CCCCBSCEE-EECCTTSEEEEECCBS--CCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSCSSSBCSSEEEEECCCT
T ss_pred             CCCcccceE-EEecCCEEEEEEeCCc--CCCCCceeEEEEEEEeccCCCCcccccCCCceEEEeecCCccceeEeCCCCC
Confidence            567788885 4688899999999984  4444 68999999987421111        111    113478999999999


Q ss_pred             CcEEEEEEEEeeCCCC---CCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccc
Q psy8774         155 GIEYSAEVQAITKAGP---GPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDL  231 (427)
Q Consensus       155 ~t~Y~~~V~a~~~~g~---~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~  231 (427)
                      ++.|.|+|+|.|..|.   ++.+..+.+.|..   .+|..+.+...+.+++.|+|++|...+|.+.+|+|+|+..+..  
T Consensus       410 ~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~---~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~--  484 (536)
T 3fl7_A          410 HMNYTFTVEARNGVSGLVTSRSFRTASVSINQ---TEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDS--  484 (536)
T ss_dssp             TCEEEEEEEEECTTGGGCSCCCEEEEEEECCS---CCCCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--C--
T ss_pred             CCEEEEEEEEEecCCCCCCCCccceeEEeecc---cCCCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCC--
Confidence            9999999999999887   3345556666643   4566666678889999999999987789999999999986332  


Q ss_pred             cccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         232 DEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                       ..                             ........++++|.+|+|++.|.|+|+|.|..|.|++|..+.++|.+
T Consensus       485 -~~-----------------------------~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~  533 (536)
T 3fl7_A          485 -NS-----------------------------YNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS  533 (536)
T ss_dssp             -CC-----------------------------CEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred             -ce-----------------------------EEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence             11                             12334567899999999999999999999999999999999999854

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}

Probab=99.87  E-value=6.6e-21  Score=163.54  Aligned_cols=165  Identities=18%  Similarity=0.253  Sum_probs=125.5

Q ss_pred             CCCcc--ceEEEEEeeCCCCCCCcceEeEEEEEEecC-ccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCccc
Q psy8774           2 LKEEP--EVTIELVWSQPTQTYGEILGYRVKYGVREH-TLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET   77 (427)
Q Consensus         2 ~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~   77 (427)
                      +.+++  +++|.|+|.+|.  ++.+.+|.|+|+..+. ..|.... ....+++.|.+|.|++.|.|+|+|.+..|.+..+
T Consensus         8 v~~v~~~~~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~   85 (201)
T 2ha1_A            8 ITETPSQPNSHPIQWNAPQ--PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVT   85 (201)
T ss_dssp             CCSCSCCSSCEEEEEECCS--STTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECTTSCEEEE
T ss_pred             EEecCCCCCEEEEEEeCCC--CCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEecccccCce
Confidence            34556  899999999983  6789999999997654 3455443 6668899999999999999999999999988654


Q ss_pred             ceEEeCCCC-----------CCCCCC----eeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EE
Q psy8774          78 VRYYTTPEG-----------PPTGPP----ANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HR  140 (427)
Q Consensus        78 ~~~~~t~~~-----------~p~~~p----~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~  140 (427)
                      ...+.|...           .|..+|    .++++...+.+++.|+|.+|.     +.+.+|.|.|+....+....  ..
T Consensus        86 ~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~~~~~~~v  160 (201)
T 2ha1_A           86 RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSAS-----DTVSGFRVEYELSEEGDEPQYLDL  160 (201)
T ss_dssp             EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCSC-----TTEEEEEEEEEETTTCCCCEEEEE
T ss_pred             eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCCC-----CCccEEEEEEEECCCCCceeEEEc
Confidence            333333211           122223    466778888999999999883     58999999999753232222  23


Q ss_pred             eeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCC
Q psy8774         141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPW  173 (427)
Q Consensus       141 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~  173 (427)
                      ....+++.|.+|.|++.|.|+|+|.|..|.|..
T Consensus       161 ~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~  193 (201)
T 2ha1_A          161 PSTATSVNIPDLLPGRKYIVNVYQISEDGEQSL  193 (201)
T ss_dssp             ETTCCEEEECSCCTTCEEEEEEEEEETTSCEEE
T ss_pred             CCceeEEEeCCCCCCCEEEEEEEEEcCCCCccc
Confidence            345789999999999999999999999988743

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A

Probab=99.86  E-value=6.5e-20  Score=157.54  Aligned_cols=161  Identities=20%  Similarity=0.368  Sum_probs=128.0

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeE-e-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENL-V-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRY   80 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~   80 (427)
                      ..+++++|.|+|++|.  ++.+.+|.|+|+..+...+... . ....+++.+.+|.|++.|.|+|+|.+..|.+......
T Consensus        32 ~~~~~~sv~lsW~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~  109 (203)
T 2gee_A           32 VDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTTLT  109 (203)
T ss_dssp             ECCTTTCEEEEEECCS--SSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEESSSCBCCCEEEE
T ss_pred             EecCCCEEEEEecCCC--CCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCCccccEeee
Confidence            4567899999999986  4578999999998766543222 2 6778999999999999999999999988887655433


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--EeeeeeEEEEccCCCCcEE
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTTQTKAVFSNLEEGIEY  158 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y  158 (427)
                      ..  ...|  +|.++++...+.+++.|+|++|.    ++.+.+|.|+|+..........  .....+++.|.+|.|++.|
T Consensus       110 t~--~~~p--~P~~l~~~~~~~~sv~l~W~~p~----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y  181 (203)
T 2gee_A          110 QQ--TAVP--PPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEY  181 (203)
T ss_dssp             EE--CCCC--CCEEEEEEEEETTEEEEEEECCS----SCCCSEEEEEEEETTCGGGCEEEEECTTCCEEEECSCCTTCEE
T ss_pred             ec--CCCc--CCCceEEEEcCCCEEEEEEcCCC----CCCccEEEEEEEECCCCCccEEEEcCCCcCEEEECCCCCCCEE
Confidence            33  3333  68999999999999999999984    2578999999998633332332  2345899999999999999


Q ss_pred             EEEEEEeeCCCCCCC
Q psy8774         159 SAEVQAITKAGPGPW  173 (427)
Q Consensus       159 ~~~V~a~~~~g~~~~  173 (427)
                      .|+|+|.+..|.|..
T Consensus       182 ~~~V~A~~~~g~s~p  196 (203)
T 2gee_A          182 VVSVSSVYEQHESTP  196 (203)
T ss_dssp             EEEEEEEETTEECCC
T ss_pred             EEEEEEecCCCcCCC
Confidence            999999999888743

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A

Probab=99.86  E-value=6e-20  Score=158.68  Aligned_cols=185  Identities=17%  Similarity=0.220  Sum_probs=140.7

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe----eeeeEEEE--ccCCCCcEEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN----TTQTKAVF--SNLEEGIEYSAE  161 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----~~~~~~~i--~~L~p~t~Y~~~  161 (427)
                      ||++|.++++...+...+.|+|+++.  +.+ ...+|.|.|+.... ..+....    .....+.+  .+|.+++.|.|+
T Consensus         3 pP~~P~nl~c~~~~~~~~~c~W~p~~--~~~-~~~~Y~l~y~~~~~-~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~   78 (210)
T 3n06_B            3 PPGKPEIFKCRSPNKETFTCWWRPGT--DGG-LPTNYSLTYHREGE-TLMHECPDYITGGPNSCHFGKQYTSMWRTYIMM   78 (210)
T ss_dssp             CCCCCEEEEEEBSSSSCEEEEEECCS--SSC-CCSEEEEEEEETTC-CCCEECSCSSTTCTTEEEECGGGCCSSSCEEEE
T ss_pred             CCCCCeEeEEEeCCCCeEEEEECCCC--CCC-CCceEEEEEEECCC-CccccCCCCCCCCCeEEEeCCCCcccceeEEEE
Confidence            66889999999999999999999984  333 34699999997632 2222211    12345555  569999999999


Q ss_pred             EEEeeCCCCCCCCCCeEEEccc-ccCCCCCceEEEeee----CcEEEEEeeeCCCCC---C-ceeEEEEEEEeccccccc
Q psy8774         162 VQAITKAGPGPWSPKLSLMTAR-DMVRAPLGVKALATS----DQSVEVWWKPVPAGR---G-KILGYQIFYTMTAVEDLD  232 (427)
Q Consensus       162 V~a~~~~g~~~~s~~~~~~t~~-~~p~~p~~l~~~~~~----~~si~v~W~~p~~~~---g-~i~~Y~I~~~~~~~~~~~  232 (427)
                      |.|.|..|.+ .+..+.+.+.. .+|.+|.++.+...+    .+++.|+|++|...+   | .+.+|+|.|+..+.   .
T Consensus        79 V~A~N~~G~~-~s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~---~  154 (210)
T 3n06_B           79 VNATNQMGSS-FSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKA---A  154 (210)
T ss_dssp             EEEEETTEEE-ECCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTC---S
T ss_pred             EEEEcCCCCe-eCCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCC---C
Confidence            9999999987 55666666533 467899999988764    589999999987543   3 46899999998632   2


Q ss_pred             ccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC-CCCccceEEeec
Q psy8774         233 EWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL-GRLSGKVTVKVK  309 (427)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~-g~~s~~~~~~t~  309 (427)
                      .|                             ........+++.|.+|.|++.|.|+|+|.+..|. |.+|..+.++|+
T Consensus       155 ~~-----------------------------~~~~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp  203 (210)
T 3n06_B          155 EW-----------------------------EIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP  203 (210)
T ss_dssp             SC-----------------------------EEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred             CC-----------------------------EEEeccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECc
Confidence            33                             2222345678999999999999999999999885 999999999983

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A

Probab=99.85  E-value=2.3e-19  Score=171.77  Aligned_cols=256  Identities=16%  Similarity=0.197  Sum_probs=164.4

Q ss_pred             eEEEEEeeCCCCCC------CcceEeEEEEEEecCccceeEe--ecCcceEEEc--CCCCCceEEEEEEEEeccC---cC
Q psy8774           8 VTIELVWSQPTQTY------GEILGYRVKYGVREHTLKENLV--NSKNMSFLIT--NLERGVEYEFRIAGQNHIG---YG   74 (427)
Q Consensus         8 ~sv~l~W~~p~~~~------~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~--~L~p~t~Y~~~V~a~~~~g---~~   74 (427)
                      +.+.|+|++|....      +..+.|.|+|+..+ ..|....  ......+.+.  +|.|++.|.|+|+|.+..|   .|
T Consensus       122 ~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G  200 (419)
T 2gys_A          122 DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSG  200 (419)
T ss_dssp             TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEEEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCB
T ss_pred             CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeeecccceEEEechhhcCCCCeEEEEEEEecCCCCCCCc
Confidence            58999999987321      35689999999876 5565443  2345666776  8999999999999999643   34


Q ss_pred             cc---c-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccC-C---CceEEE----ee
Q psy8774          75 QE---T-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID-A---NNVIHR----NT  142 (427)
Q Consensus        75 ~~---~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~-~---~~~~~~----~~  142 (427)
                      ..   + ...+.+.++. +.+|.++.+...+.+.+.+.|+++.  ...+ ..+|.|.|+.... +   ..+...    ..
T Consensus       201 ~wS~WS~~~~~~t~~~~-~~~p~~l~c~~~~~~~l~c~W~~~~--~~~~-~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~  276 (419)
T 2gys_A          201 RPSKWSPEVCWDSQPGD-EAQPQNLECFFDGAAVLSCSWEVRK--EVAS-SVSFGLFYKPSPDAGSAVLLREEECSPVLR  276 (419)
T ss_dssp             CCCCCCCCEEEECCCCC-TTSCEEEEEEECSSSEEEEEEEEEH--HHHT-TCCEEEEEECC-----CCCCCCEECCCEEE
T ss_pred             ccCCCCCceeeeccccc-cCCCceEEEEECCceEEEeEEECCC--CCCC-ceeEEEEEEecCccccccCcccccCCCccc
Confidence            43   2 3456676665 4679999999989999999999862  1112 2469999986532 1   011111    01


Q ss_pred             ---------eeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEccc-ccCCCCCceEEEeeeCcEEEEEeeeCCCC
Q psy8774         143 ---------TQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR-DMVRAPLGVKALATSDQSVEVWWKPVPAG  212 (427)
Q Consensus       143 ---------~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~-~~p~~p~~l~~~~~~~~si~v~W~~p~~~  212 (427)
                               ....+.+.+|.+.+.|.|+|.|.++.+        .+.... ..|.|| .+.+.. ..+++.|+|++|...
T Consensus       277 ~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~~~--------~~~~~~~v~p~PP-~l~v~~-~~~~l~l~W~~P~~~  346 (419)
T 2gys_A          277 EGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEK--------HIKSSVNIQMAPP-SLQVTK-DGDSYSLRWETMKMR  346 (419)
T ss_dssp             ECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCCCE--------EEEGGGSBCCCCC-EEEEC----CCCEEEEEC----
T ss_pred             ccCCCcceeEEeEEECccCCccCEEEEEEEEccCCc--------cccceEEEEECCC-CeEEEE-eCCeEEEEECCCccc
Confidence                     123556778899999999999874432        122111 134555 466555 478999999999632


Q ss_pred             C-CceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEE
Q psy8774         213 R-GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAA  291 (427)
Q Consensus       213 ~-g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a  291 (427)
                      . ..+.+|+|.|+..+.    .|...                          ........+++.|.+|.|++.|.|+|+|
T Consensus       347 ~~~~~l~Yev~y~~~~~----~w~~~--------------------------~~~~~~~~~~~~l~~L~p~t~Y~~qVRa  396 (419)
T 2gys_A          347 YEHIDHTFEIQYRKDTA----TWKDS--------------------------KTETLQNAHSMALPALEPSTRYWARVRV  396 (419)
T ss_dssp             ----CEEEEEEEECSSS----CSTTS--------------------------CEEEEESCSEEECCCCCSSCCCEEEEEE
T ss_pred             ccccceEEEEEEEcCCC----Cccee--------------------------eccccccccEEEeccCCCCCeEEEEEEE
Confidence            1 257799999997632    12000                          0111125678999999999999999999


Q ss_pred             EeccC-----CCCCccceEEee
Q psy8774         292 RTVNG-----LGRLSGKVTVKV  308 (427)
Q Consensus       292 ~~~~G-----~g~~s~~~~~~t  308 (427)
                      .+..|     .|.+|.++.+.|
T Consensus       397 ~~~~g~~~G~wS~WS~~~~~~t  418 (419)
T 2gys_A          397 RTSRTGYNGIWSEWSEARSWDT  418 (419)
T ss_dssp             EECCTTCCBCCCCCCCCEECCC
T ss_pred             EEcCCCCCCccCCCCCCeEeeC
Confidence            99763     446676666654

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A

Probab=99.84  E-value=5e-20  Score=168.60  Aligned_cols=174  Identities=18%  Similarity=0.243  Sum_probs=134.8

Q ss_pred             cceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcCC-CCCceEEEEEEEEeccCcCcccceEEeC
Q psy8774           6 PEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNL-ERGVEYEFRIAGQNHIGYGQETVRYYTT   83 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L-~p~t~Y~~~V~a~~~~g~~~~~~~~~~t   83 (427)
                      +.++|.|+|+++.+.+ .+.+|.|+|+..++..+.... ....+++.+.+| .|++.|.|+|.|.|..|.+.+....+.+
T Consensus       116 ~~~~v~l~W~~~~~~~-~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~  194 (303)
T 1i1r_A          116 EGKKMRCEWDGGRETH-LETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDP  194 (303)
T ss_dssp             TTSCCEEEEECCSCCS-SCCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECG
T ss_pred             CCCcEEEEccCCCCCC-CCcCEEEEEEecCCCCccCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCCcccCCEEECH
Confidence            4478999999997654 467999999876544444333 556789999999 9999999999999999988654455554


Q ss_pred             CCCCCCCCCeeeEEEee--cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-----eeeeeEEEEccCCCCc
Q psy8774          84 PEGPPTGPPANISHHFQ--TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-----NTTQTKAVFSNLEEGI  156 (427)
Q Consensus        84 ~~~~p~~~p~~~~~~~~--~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~~~~~~~~i~~L~p~t  156 (427)
                      ....++.+|.++.+...  +.+++.|+|++|.  ..++.+.+|.|+|+..+ ...+...     ....+++.|.+|.|++
T Consensus       195 ~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~y~~~~-~~~w~~~~~~~~~~~~~~~~l~~L~p~t  271 (303)
T 1i1r_A          195 VYKVKPNPPHNLSVINSEELSSILKLTWTNPS--IKSVIILKYNIQYRTKD-ASTWSQIPPEDTASTRSSFTVQDLKPFT  271 (303)
T ss_dssp             GGGEECCCCEEEEEECCSSSSSCEEEEEECCG--GGGTSCEEEEEEEEETT-CSSCEECCGGGGCSCCSEEEECSCCTTC
T ss_pred             HHeEecCCCcceEEEEecCCCCEEEEEECCCC--CCCcccEEEEEEEEeCC-CCCceEEccccCCCceeEEEeCCCCCCC
Confidence            44456778999888754  6789999999985  45678999999999874 3334443     2346889999999999


Q ss_pred             EEEEEEEEeeCCCCCCC---CCCeEEEccc
Q psy8774         157 EYSAEVQAITKAGPGPW---SPKLSLMTAR  183 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~---s~~~~~~t~~  183 (427)
                      .|.|+|+|.|..|.|.+   |..+.++|.+
T Consensus       272 ~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e  301 (303)
T 1i1r_A          272 EYVFRIRCMKEDGKGYWSDWSEEASGITYE  301 (303)
T ss_dssp             EEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred             EEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence            99999999999988765   5677777754

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=99.84  E-value=5.8e-20  Score=178.08  Aligned_cols=173  Identities=20%  Similarity=0.297  Sum_probs=131.3

Q ss_pred             CccceEEEEEeeCCCCCCC-cceEeEEEEEEecCc-----------cceeEe-ecCcceEEEcCCCCCceEEEEEEEEec
Q psy8774           4 EEPEVTIELVWSQPTQTYG-EILGYRVKYGVREHT-----------LKENLV-NSKNMSFLITNLERGVEYEFRIAGQNH   70 (427)
Q Consensus         4 ~~~~~sv~l~W~~p~~~~~-~i~~Y~v~~~~~~~~-----------~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~   70 (427)
                      .+++++|.|+|++|.+.++ ++.+|.|+|+..+..           .|.... ....+++++.+|.|++.|.|+|.|.|.
T Consensus       343 ~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~  422 (536)
T 3fl7_A          343 VGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNG  422 (536)
T ss_dssp             ECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECT
T ss_pred             EecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEec
Confidence            4678899999999986665 789999999974321           111111 346789999999999999999999999


Q ss_pred             cCcCc---c-cceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeE
Q psy8774          71 IGYGQ---E-TVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTK  146 (427)
Q Consensus        71 ~g~~~---~-~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~  146 (427)
                      .|.+.   . ....+.|.+.    +|..+.+...+.+++.|+|++|  ...++.+.+|.|+|+..+............++
T Consensus       423 ~G~~sps~~s~~v~v~T~~~----~Ps~~~~~~~s~tSV~LsW~pP--~~~ng~I~~Y~V~y~~~~~~~~~~~v~~~~ts  496 (536)
T 3fl7_A          423 VSGLVTSRSFRTASVSINQT----EPPKVRLEGRSTTSLSVSWSIP--PPQQSRVWKYEVTYRKKGDSNSYNVRRTEGFS  496 (536)
T ss_dssp             TGGGCSCCCEEEEEEECCSC----CCCEEEEEECCC-CCEEEEECC--TTTTTTCSEEEEEEEEC--CCCCEEEEESSSE
T ss_pred             CCCCCCCCccceeEEeeccc----CCCCCceeeccCCeEEEEEECC--cCCCCcccEEEEEEEECCCCceEEEEcCCCCE
Confidence            88732   2 2345566443    3555666778899999999998  46778999999999987544233444566889


Q ss_pred             EEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         147 AVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       147 ~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      +.|.+|.|++.|.|+|+|.|..|.|++|..+.++|.
T Consensus       497 ~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~  532 (536)
T 3fl7_A          497 VTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTL  532 (536)
T ss_dssp             EECCSCCSSCEEEEEEEEECC---CEECCCEEEECC
T ss_pred             EEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeC
Confidence            999999999999999999999999999999999984

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=99.84  E-value=1.6e-18  Score=164.17  Aligned_cols=301  Identities=16%  Similarity=0.123  Sum_probs=193.4

Q ss_pred             CcceEEEcCCCCCceEEEEEEEEeccCcCccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEE
Q psy8774          46 KNMSFLITNLERGVEYEFRIAGQNHIGYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLY  124 (427)
Q Consensus        46 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y  124 (427)
                      ....+.|.++.......+++.|.|..|..... ...+...+... .++..+  .......+.|.....      |.. ..
T Consensus        61 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~-~~~~~~--~~~~g~~~~l~C~~~------g~p-~~  130 (389)
T 2jll_A           61 GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFI-SNQTIY--YSWEGNPINISCDVK------SNP-PA  130 (389)
T ss_dssp             SEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEC-CSCCEE--EECTTCCEEEEECEE------EES-CC
T ss_pred             CcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEeCCEEe-cCcceE--EeccCCEEEEEEEEE------ecC-CC
Confidence            45678899999988889999999988764321 11121111100 111111  111222333333211      000 12


Q ss_pred             EEEEEEccC----CC--ceEE-EeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEee
Q psy8774         125 NVKFHKKID----AN--NVIH-RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALAT  197 (427)
Q Consensus       125 ~v~~~~~~~----~~--~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~  197 (427)
                      .|.|...+.    ..  .... .......+.|.++.+...+.+++.|.|..|....  ...+. ...+|.+|.++.+...
T Consensus       131 ~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~--~~~l~-v~~~P~~P~~~~~~~~  207 (389)
T 2jll_A          131 SIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQ--EYILA-LADVPSSPYGVKIIEL  207 (389)
T ss_dssp             EEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEE--EEEEE-ECCCCCCCEEEEEEEE
T ss_pred             eEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEE--EEEEE-ecCCCCCCcceEEeec
Confidence            333433210    00  1111 1123567889999999999999999999887422  12222 3456788888999888


Q ss_pred             eCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceec
Q psy8774         198 SDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAEL  276 (427)
Q Consensus       198 ~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  276 (427)
                      +.+++.|+|.+|...+| .+.+|.|+|...+.   ..|.                            ..........+.|
T Consensus       208 ~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~---~~~~----------------------------~~~~~~~~~~~~i  256 (389)
T 2jll_A          208 SQTTAKVSFNKPDSHGGVPIHHYQVDVKEVAS---EIWK----------------------------IVRSHGVQTMVVL  256 (389)
T ss_dssp             CSSCEEEEEECCSCCTTSCEEEEEEEEEETTC---SCCE----------------------------EEECSTTCSEEEE
T ss_pred             cCCEEEEEEeCCCCCCCcceEEEEEEEEECCC---cccE----------------------------EeeccCCcceEEE
Confidence            89999999998765544 78899999988632   2220                            0112234567899


Q ss_pred             cCCCCCCeEEEEEEEEeccCCCCCccceEEeecC---CCCCcceEEeecCCCeEEEEecCCCcCCC--ceEEEEEeheee
Q psy8774         277 TSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP---EDVPLSLRAHDVSTHSMTLSWSPPIKLNP--VKYKEVSEKIQE  351 (427)
Q Consensus       277 ~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~---~~~P~~l~~~~~~~~~v~l~W~~P~~~~g--~~Y~i~~~~~~~  351 (427)
                      .+|.+++.|.|+|+|.|..|.|..|..+.+.|.+   +.+| .+.....+.+++.|+|++|...++  .+|.|++.....
T Consensus       257 ~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p-~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~  335 (389)
T 2jll_A          257 NNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPP-SIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDK  335 (389)
T ss_dssp             CSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCC-CEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC---
T ss_pred             CCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCC-ccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCC
Confidence            9999999999999999999999999888888743   3445 466666799999999999887665  499999875322


Q ss_pred             cceee----eeeEEEEeecccccccceEEEEEeecccCCCCcch
Q psy8774         352 RRLQK----YGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKK  391 (427)
Q Consensus       352 ~~l~~----~t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~  391 (427)
                      .....    ...-..+....|.+...|.|+|+|.|..|.|+|..
T Consensus       336 ~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~  379 (389)
T 2jll_A          336 EDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTV  379 (389)
T ss_dssp             --CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEE
T ss_pred             CcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCcee
Confidence            21110    11112346688999999999999999999999864

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=99.83  E-value=5.2e-19  Score=162.57  Aligned_cols=228  Identities=15%  Similarity=0.131  Sum_probs=153.2

Q ss_pred             ceEEEcCCCCCceEEEEEEEEeccCcCc-ccceEEeCCCCCCCCCCeeeEEEeec-CCEEEEEeeCCCCCCCCcceeEEE
Q psy8774          48 MSFLITNLERGVEYEFRIAGQNHIGYGQ-ETVRYYTTPEGPPTGPPANISHHFQT-PDVVCITWDPPLRTHRNGQIVLYN  125 (427)
Q Consensus        48 ~~~~~~~L~p~t~Y~~~V~a~~~~g~~~-~~~~~~~t~~~~p~~~p~~~~~~~~~-~~~v~v~W~~p~~~~~~~~i~~Y~  125 (427)
                      ..+.|.++.......+.+.+.+  |.+. .....+..  ..|+.+|.++.+...+ .+++.|+|+++.  +.+ ....|.
T Consensus        61 ~~L~i~~~~~~d~g~y~c~~~~--~~~~~~~~~~l~v--~~~P~~P~~l~c~~~~~~~~~~~~W~~~~--~~~-~~~~Y~  133 (313)
T 2d9q_B           61 SIITLPHLNHTQAFLSCSLNWG--NSLQILDQVELRA--GYPPAIPHNLSCLMNLTTSSLICQWEPGP--ETH-LPTSFT  133 (313)
T ss_dssp             EEEEESCCCSSEEEEEEEEESS--SSEEEEEEEEEEE--CCCCCCCEEEEEEEETTTTEEEEEEECCS--CCS-SCCEEE
T ss_pred             EEEEEeccCCCccceEEeeecC--CCceeEEEEEEcc--CCCCCCCccceeeECCCCccEEEEecCCC--CCC-CceeEE
Confidence            5789999998877666666643  2221 11112221  2466789999988874 689999999984  333 345799


Q ss_pred             EEEEEccCC-----CceEEEe--eeeeEEEEc--cCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcc-cccCCCCCceEEE
Q psy8774         126 VKFHKKIDA-----NNVIHRN--TTQTKAVFS--NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA-RDMVRAPLGVKAL  195 (427)
Q Consensus       126 v~~~~~~~~-----~~~~~~~--~~~~~~~i~--~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~-~~~p~~p~~l~~~  195 (427)
                      |+|+.....     ..+....  .....+.+.  +|.+++.|.|+|.|.|..|.+ .+..+.+.+. ..+|.+|.++.+.
T Consensus       134 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~-~s~~~~~~~~~~~~p~pP~~~~~~  212 (313)
T 2d9q_B          134 LKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTS-MSPQLCLDPMDVVKLEPPMLRTMD  212 (313)
T ss_dssp             EEEEECCTTSCSCCCCEEEECCCTTCSEEEEEGGGCCSSSCEEEEEEEEETTEEE-ECCCEEECGGGGEECCCCEEEECC
T ss_pred             EEEEecCCCcccCCcccccCCCCCCCcEEEECccccccceeEEEEEEEECCCCCc-cCccEEEehhheeccCcCceeEEE
Confidence            999876321     1111111  224556664  599999999999999999986 4556666663 3467899998887


Q ss_pred             ee------eCcEEEEEeeeCCCCCCceeEEEEEEE-ecccccccccccccccccccccceeEEeeecccccccccccccc
Q psy8774         196 AT------SDQSVEVWWKPVPAGRGKILGYQIFYT-MTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSV  268 (427)
Q Consensus       196 ~~------~~~si~v~W~~p~~~~g~i~~Y~I~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (427)
                      ..      ..+++.|+|++|...++.+.+|+|+|+ ..   ....|..                           .....
T Consensus       213 ~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~---~~~~w~~---------------------------~~~~~  262 (313)
T 2d9q_B          213 PSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQR---GEASWAL---------------------------VGPLP  262 (313)
T ss_dssp             C-------CCSCEEEEEECCGGGTTSCEEEEEEEEESS---SCCCCEE---------------------------EEEEC
T ss_pred             EecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCC---CCCCcEE---------------------------ccccc
Confidence            65      468999999998743344579999999 44   2223310                           01122


Q ss_pred             CCCCceeccCCCCCCeEEEEEEEEeccCCCC---CccceEEeecCCCCC
Q psy8774         269 PLTESAELTSLEKFTEYAVAVAARTVNGLGR---LSGKVTVKVKPEDVP  314 (427)
Q Consensus       269 ~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~---~s~~~~~~t~~~~~P  314 (427)
                      ...+++.|.+|.|++.|.|+|+|.+..|.|.   +|..+.++| +..+|
T Consensus       263 ~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T-~~~~P  310 (313)
T 2d9q_B          263 LEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRT-TERAA  310 (313)
T ss_dssp             SCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECC-CC---
T ss_pred             CcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeC-CccCC
Confidence            3456789999999999999999999977665   667777777 44444

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A

Probab=99.82  E-value=7e-19  Score=152.53  Aligned_cols=190  Identities=16%  Similarity=0.148  Sum_probs=136.0

Q ss_pred             CCCCCCCeeeEEEee-cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCC----Cc-eEEEe----eeeeEEEEccCCCC
Q psy8774          86 GPPTGPPANISHHFQ-TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDA----NN-VIHRN----TTQTKAVFSNLEEG  155 (427)
Q Consensus        86 ~~p~~~p~~~~~~~~-~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~----~~-~~~~~----~~~~~~~i~~L~p~  155 (427)
                      +.|+++|.++.+... ..+.+.|+|+++.  +. +...+|.|.|+.....    .. .....    .....+.+.+|.++
T Consensus         2 G~pP~~P~~l~c~~~~~~~~~~~~W~p~~--~~-~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~   78 (215)
T 1cd9_B            2 GYPPASPSNLSCLMHLTTNSLVCQWEPGP--ET-HLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLY   78 (215)
T ss_dssp             CCCCCCCEEEEEEEETTTTEEEEEEECCS--CC-SSCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTT
T ss_pred             CCCCCCCeeeeeecCCCcccEEEEecCCC--CC-CCceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccc
Confidence            357788999998877 6889999999884  33 3345799999875211    11 11111    12456677799999


Q ss_pred             cEEEEEEEEeeCCCCCCCCCCeEEEccc-ccCCCCCceEEEee------eCcEEEEEeeeCCCCCCceeEEEEEEE-ecc
Q psy8774         156 IEYSAEVQAITKAGPGPWSPKLSLMTAR-DMVRAPLGVKALAT------SDQSVEVWWKPVPAGRGKILGYQIFYT-MTA  227 (427)
Q Consensus       156 t~Y~~~V~a~~~~g~~~~s~~~~~~t~~-~~p~~p~~l~~~~~------~~~si~v~W~~p~~~~g~i~~Y~I~~~-~~~  227 (427)
                      +.|.|+|.|.|..|.+ .|..+.+.+.. .+|.+|.++.+...      ..+++.|+|++|...+..+.+|+|.|+ ..+
T Consensus        79 ~~Y~~~V~A~N~~G~~-~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~  157 (215)
T 1cd9_B           79 QYMAIWVQAENMLGSS-ESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLK  157 (215)
T ss_dssp             SCEEEEEEEEETTEEE-ECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESST
T ss_pred             eEEEEEEEEECCCCCc-cCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCC
Confidence            9999999999999876 56667776633 46789999988776      578899999998753334489999998 442


Q ss_pred             cccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC---CCCccce
Q psy8774         228 VEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL---GRLSGKV  304 (427)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~---g~~s~~~  304 (427)
                         ...|..                           ........+++.|.+|.|++.|.|+|+|.+..|.   |.+|..+
T Consensus       158 ---~~~w~~---------------------------~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~  207 (215)
T 1cd9_B          158 ---GANWTL---------------------------VFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGL  207 (215)
T ss_dssp             ---TCCCEE---------------------------EEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCE
T ss_pred             ---CCCcEE---------------------------EecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCcc
Confidence               223310                           0011234568899999999999999999998665   4577778


Q ss_pred             EEeec
Q psy8774         305 TVKVK  309 (427)
Q Consensus       305 ~~~t~  309 (427)
                      .++|.
T Consensus       208 ~~~T~  212 (215)
T 1cd9_B          208 QLRPT  212 (215)
T ss_dssp             EECCC
T ss_pred             ceecC
Confidence            88874

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A

Probab=99.82  E-value=2.9e-18  Score=148.07  Aligned_cols=178  Identities=18%  Similarity=0.247  Sum_probs=134.6

Q ss_pred             ccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe---ecCcceEEE--cCCCCCceEEEEEEEEeccCcCcccce
Q psy8774           5 EPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV---NSKNMSFLI--TNLERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         5 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~--~~L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      ....+|.++|+++.+.+. ...|.|.|+..+...|....   .....++.+  .+|.+++.|.|+|.|.|..|.+.+...
T Consensus        15 ~~~~~~~c~W~p~~~~~~-~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V~A~N~~G~~~s~~~   93 (210)
T 3n06_B           15 PNKETFTCWWRPGTDGGL-PTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQMGSSFSDEL   93 (210)
T ss_dssp             SSSSCEEEEEECCSSSCC-CSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEEEEEETTEEEECCCE
T ss_pred             CCCCeEEEEECCCCCCCC-CceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEEEEEcCCCCeeCCcE
Confidence            456789999999886544 46899999976655565442   122345555  569999999999999999998765555


Q ss_pred             EEeCCCCCCCCCCeeeEEEeec----CCEEEEEeeCCCCCCC-Cc-ceeEEEEEEEEccCCCceEEE-eeeeeEEEEccC
Q psy8774          80 YYTTPEGPPTGPPANISHHFQT----PDVVCITWDPPLRTHR-NG-QIVLYNVKFHKKIDANNVIHR-NTTQTKAVFSNL  152 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~----~~~v~v~W~~p~~~~~-~~-~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L  152 (427)
                      .+.+...+++.||.++.+....    .+++.|+|++|..... +| .+.+|.|+|+.... ..+... ....+.+.|.+|
T Consensus        94 ~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~-~~~~~~~~~~~~~~~l~~L  172 (210)
T 3n06_B           94 YVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKA-AEWEIHFAGQQTEFKILSL  172 (210)
T ss_dssp             EECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTC-SSCEEEEEETCSEEEECCC
T ss_pred             EEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCC-CCCEEEeccCceEEEEecc
Confidence            5665555677889999888653    5899999999864332 23 46899999998743 233322 234789999999


Q ss_pred             CCCcEEEEEEEEeeCCCC-CCCCCCeEEEcccc
Q psy8774         153 EEGIEYSAEVQAITKAGP-GPWSPKLSLMTARD  184 (427)
Q Consensus       153 ~p~t~Y~~~V~a~~~~g~-~~~s~~~~~~t~~~  184 (427)
                      .|++.|.|+|+|.+..|. |.+|..+.++|..+
T Consensus       173 ~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~~  205 (210)
T 3n06_B          173 HPGQKYLVQVRCKPDHGYWSAWSPATFIQIPSD  205 (210)
T ss_dssp             CTTCEEEEEEEEEESSSCCCCCCCCEEEECCTT
T ss_pred             CCCCEEEEEEEEecCCCcccCCCCceeEECcCC
Confidence            999999999999999887 88999999998554

>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=99.81  E-value=9e-20  Score=159.84  Aligned_cols=174  Identities=15%  Similarity=0.202  Sum_probs=109.2

Q ss_pred             CCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEE
Q psy8774         116 HRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKAL  195 (427)
Q Consensus       116 ~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~  195 (427)
                      +.++.|.+|.|++................+++.+.+|.|++.|.|+|+|.|..|.|.+|....+.+....|..|..+...
T Consensus        17 ~~~~~Vt~Y~~~~~~~~~~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~~~   96 (232)
T 4go6_B           17 GTNVMVTHYFLPPDDAVPSDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKI   96 (232)
T ss_dssp             SSEEEECEEECCCC------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEEEE
T ss_pred             CCCEEEEEEEEEeeCCCCCcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCeeeEE
Confidence            34456788988876542222222223457789999999999999999999999999889888888754433334444555


Q ss_pred             eeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc---------c
Q psy8774         196 ATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ---------K  266 (427)
Q Consensus       196 ~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~  266 (427)
                      ..+.+++.|+|.+|...+|.|.+|.|+|+..............                   .....|..         .
T Consensus        97 ~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~  157 (232)
T 4go6_B           97 SKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSST-------------------PAQLAFMRVYCGPSPSCL  157 (232)
T ss_dssp             EEETTEEEEEEECCSCCSSCCCEEEEEEEEC--------------------------------CCEEEEEEEEESSSEEE
T ss_pred             ecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceeeecc-------------------CCceeeEEEEeccCceEE
Confidence            6788999999999998889999999999876432211110000                   00000011         1


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      .......+.+.+|.+++.|.|+|+|.|..|.|++|....+.+
T Consensus       158 ~~~~~l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~  199 (232)
T 4go6_B          158 VQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQE  199 (232)
T ss_dssp             EEHHHHTTBCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC
T ss_pred             EEccccEEeeecCccCCceEEEEEEECCCcCCCCcccEEecc
Confidence            111222445678999999999999999999999998655555

>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=99.79  E-value=1.1e-19  Score=159.29  Aligned_cols=167  Identities=19%  Similarity=0.232  Sum_probs=106.0

Q ss_pred             EEeeCC---CCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccc-eEEeCCCCC
Q psy8774          12 LVWSQP---TQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETV-RYYTTPEGP   87 (427)
Q Consensus        12 l~W~~p---~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~-~~~~t~~~~   87 (427)
                      ..|...   ...++.|.+|.|+++......+........+++.+.+|.|++.|.|+|+|+|..|.|+.+. ..+.+....
T Consensus         7 ~qW~dvgv~~~~~~~Vt~Y~~~~~~~~~~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~   86 (232)
T 4go6_B            7 NQWFDVGVIKGTNVMVTHYFLPPDDAVPSDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPG   86 (232)
T ss_dssp             -CCEEEEEESSSEEEECEEECCCC------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTT
T ss_pred             CEeecCCEecCCCEEEEEEEEEeeCCCCCcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCC
Confidence            467543   2445577899998765444333333355678899999999999999999999999988554 445555555


Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce------------EEE-eeeeeE--------
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV------------IHR-NTTQTK--------  146 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~------------~~~-~~~~~~--------  146 (427)
                      |+.+|..+ ....+.+++.|+|.+|  .+.+|.|.+|.|+|+........            ... ......        
T Consensus        87 ~~~~~~~~-~~~~~~~sv~l~W~~P--~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  163 (232)
T 4go6_B           87 FPGAPCAI-KISKSPDGAHLTWEPP--SVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSL  163 (232)
T ss_dssp             SCCCCEEE-EEEEETTEEEEEEECC--SCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHH
T ss_pred             CCCCCeee-EEecCCCEEEEEEeCC--CCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEcccc
Confidence            66666544 4556788999999998  46678999999999875322111            001 011122        


Q ss_pred             -EEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEc
Q psy8774         147 -AVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       147 -~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t  181 (427)
                       +.+.+|.+++.|.|+|+|.|..|.|++|+...+.+
T Consensus       164 ~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~  199 (232)
T 4go6_B          164 SNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQE  199 (232)
T ss_dssp             TTBCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC
T ss_pred             EEeeecCccCCceEEEEEEECCCcCCCCcccEEecc
Confidence             23457999999999999999999998887555544

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A

Probab=99.78  E-value=1.4e-17  Score=144.20  Aligned_cols=174  Identities=16%  Similarity=0.207  Sum_probs=126.5

Q ss_pred             cceEEEEEeeCCCCCCCcceEeEEEEEEecCc------cceeEe---ecCcceEEEcCCCCCceEEEEEEEEeccCcCcc
Q psy8774           6 PEVTIELVWSQPTQTYGEILGYRVKYGVREHT------LKENLV---NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQE   76 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~------~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~   76 (427)
                      ..++|.++|+++.+.+. ...|.|.|+.....      .+....   ....+.+.+.+|.+++.|.|+|.|.|..|.+.+
T Consensus        18 ~~~~~~~~W~p~~~~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~~~V~A~N~~G~~~s   96 (215)
T 1cd9_B           18 TTNSLVCQWEPGPETHL-PTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSES   96 (215)
T ss_dssp             TTTEEEEEEECCSCCSS-CCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEEEEEEEEETTEEEEC
T ss_pred             CcccEEEEecCCCCCCC-ceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceEEEEEEEEECCCCCccC
Confidence            45789999999876443 46799999875432      122221   223456777899999999999999999997754


Q ss_pred             cceEEeCCCCCCCCCCeeeEEEee------cCCEEEEEeeCCCCCCCCcceeEEEEEEE-EccCCCceEEE---eeeeeE
Q psy8774          77 TVRYYTTPEGPPTGPPANISHHFQ------TPDVVCITWDPPLRTHRNGQIVLYNVKFH-KKIDANNVIHR---NTTQTK  146 (427)
Q Consensus        77 ~~~~~~t~~~~p~~~p~~~~~~~~------~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~-~~~~~~~~~~~---~~~~~~  146 (427)
                      ....+.+...+++.+|.++.+...      +.+.+.|+|++|..  .+..+.+|.|+|+ .. ....+...   ....+.
T Consensus        97 ~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~--~~~~~l~Y~v~y~~~~-~~~~w~~~~~~~~~~~~  173 (215)
T 1cd9_B           97 PKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP--SEYMEQECELRYQPQL-KGANWTLVFHLPSSKDQ  173 (215)
T ss_dssp             CCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG--GTTSCEEEEEEEEESS-TTCCCEEEEEEESCEEE
T ss_pred             ccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC--CCeEEEEEEEEEccCC-CCCCcEEEecccCcceE
Confidence            455566555567788999987765      67889999999852  2233479999999 44 23333322   234678


Q ss_pred             EEEccCCCCcEEEEEEEEeeCCCCC---CCCCCeEEEccc
Q psy8774         147 AVFSNLEEGIEYSAEVQAITKAGPG---PWSPKLSLMTAR  183 (427)
Q Consensus       147 ~~i~~L~p~t~Y~~~V~a~~~~g~~---~~s~~~~~~t~~  183 (427)
                      +.|.+|.|++.|.|+|+|.+..|.|   .+|..+.++|.+
T Consensus       174 ~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e  213 (215)
T 1cd9_B          174 FELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM  213 (215)
T ss_dssp             EEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred             EEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence            9999999999999999999987765   578888887754

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}

Probab=99.77  E-value=1.7e-16  Score=152.68  Aligned_cols=343  Identities=14%  Similarity=0.132  Sum_probs=211.3

Q ss_pred             EEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCCCC-C
Q psy8774           9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEG-P   87 (427)
Q Consensus         9 sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~-~   87 (427)
                      ....+|+.|.. .+....|.+.+....    ........+.+.|..|.++. +.|.+......    .+...+.+..- .
T Consensus        19 ~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~   88 (488)
T 2q7n_A           19 VWDCTWPAPLG-VSPGTVKDICIKDRF----HSCHPLETTNVKIPALSPGD-HEVTINYLNGF----QSKFTLNEKDVSL   88 (488)
T ss_dssp             EEEEECCCCSS-SCCSCEEEEEEESSS----EEEEECSSSEEEEECCCSSC-EEEEEEESSSC----EEEEEECSTTCEE
T ss_pred             EEEEeeeCcCc-cCCCceEEEEEecCC----ceeEEeccceeEcccCCCCc-ceEEEeeccCc----eeEEEEecCcccc
Confidence            45689999963 345567888764322    12224577889999999998 57776633322    12222222222 2


Q ss_pred             CCCCCeeeEEEee-cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--e--e-e---eEEEEc-cC-CCCc
Q psy8774          88 PTGPPANISHHFQ-TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--T--T-Q---TKAVFS-NL-EEGI  156 (427)
Q Consensus        88 p~~~p~~~~~~~~-~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~--~-~---~~~~i~-~L-~p~t  156 (427)
                      -+.+|.+|.+... ....+.|+|..+...........|.|++.............  .  . .   ....-. +| ..++
T Consensus        89 ~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~w~s~~pl~c~  168 (488)
T 2q7n_A           89 IPETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATWEIKVLQNPRTEPVALVLLNTMLSGKDTVQHWNWTSDLPLQCA  168 (488)
T ss_dssp             CCCCCCEEECCEETTTTEEEEEECBCGGGSCSSEEEEEEEECCCSSSSCSCCCEECCEECSSSCBCCEEEEECSSCCSSS
T ss_pred             CCCCCeeEEEEEecCCCeEEEEEeCCCccccccCCeEEEEEEEEeccceEEEEEEEEEEecCCCceeEeeccCCCccccc
Confidence            2467889988776 47899999987742212222357888865442221211111  1  1 1   112222 21 3488


Q ss_pred             EEEEEEEEeeC----CC---CCCCCCCeEEEc------------------------------------------------
Q psy8774         157 EYSAEVQAITK----AG---PGPWSPKLSLMT------------------------------------------------  181 (427)
Q Consensus       157 ~Y~~~V~a~~~----~g---~~~~s~~~~~~t------------------------------------------------  181 (427)
                      .|.++||+...    .|   .|.||....+..                                                
T Consensus       169 ~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~t~i~v~P~~~~v~~Gs~vtl~C~a~~~~I~W~~ng~~i~~~ri~~  248 (488)
T 2q7n_A          169 THSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVFPQDKVVLAGSNMTICCMSPTKVLSGQIGNTLRPLIHLYG  248 (488)
T ss_dssp             CCEEEEEEEECCTTCCSCBCCCCCCCCEECCCCCCSSCCEECTTCEEESSCCCEEEECCSSCEEEEEETTEECCCEECSS
T ss_pred             ceEEEEEEEeccccccCCCCCcCCCChhhcCCcCCCceEECCCCCEEcCCCCEEEEEECCCCEEEEEECCEECchhhccc
Confidence            99999999851    12   234444333300                                                


Q ss_pred             ----------------------------------ccccCCCCCceEEEeeeCcEEEEEeeeCCCCC--C-ceeEEEEEEE
Q psy8774         182 ----------------------------------ARDMVRAPLGVKALATSDQSVEVWWKPVPAGR--G-KILGYQIFYT  224 (427)
Q Consensus       182 ----------------------------------~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~--g-~i~~Y~I~~~  224 (427)
                                                        ...+|.+|.++.+...+..++.++|.++...+  | .+..|.|+|+
T Consensus       249 ~~~~L~I~nl~~sd~g~y~~~C~~~~~i~~~~l~v~~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~  328 (488)
T 2q7n_A          249 QTVAIHILNIPVSENSGTNIIFITDDDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFES  328 (488)
T ss_dssp             SCEEEECCSCCCCCSSCEEEEEEESSCEEEEEEEEECCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEET
T ss_pred             eEEEEEEeCCCcccCCcEEEEEEcCCeEEEEEEEeeCCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEE
Confidence                                              01357788999998888899999999987542  2 5789999987


Q ss_pred             ecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccce
Q psy8774         225 MTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV  304 (427)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~  304 (427)
                      ..+..  ..+..                           .....+....+.+..+..++.|.|+|.|.|..|.++ + .+
T Consensus       329 ~~g~~--~~c~~---------------------------~~~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~-S-~~  377 (488)
T 2q7n_A          329 ISGKS--AVFHR---------------------------IEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQ-S-AV  377 (488)
T ss_dssp             TTCCE--EEEEC---------------------------SSCCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEE-E-EE
T ss_pred             ECCCC--CCCcc---------------------------ccccCCceEEEEEcCCCCccEEEEEEEEEeCCCCcc-c-eE
Confidence            54211  12200                           000012334555654444699999999999988744 3 34


Q ss_pred             EEee---cCCCCCcceEEeecCCCeEEEEecCCCcCCC--ceEEEEEeheeeccee------e--eeeEEEEeecccccc
Q psy8774         305 TVKV---KPEDVPLSLRAHDVSTHSMTLSWSPPIKLNP--VKYKEVSEKIQERRLQ------K--YGQYRYFETRDESYI  371 (427)
Q Consensus       305 ~~~t---~~~~~P~~l~~~~~~~~~v~l~W~~P~~~~g--~~Y~i~~~~~~~~~l~------~--~t~y~~~~~~~~~~~  371 (427)
                      .+.+   .++.||.+|++...+.+++.|+|++|...++  ++|+|.+.........      .  .+.|.+ ....|.+.
T Consensus       378 ~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v-~l~~L~P~  456 (488)
T 2q7n_A          378 VINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVRNATIRGAEDSTYHV-AVDKLNPY  456 (488)
T ss_dssp             ECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEEEEEEECCEEEEEEE-EECSCCSS
T ss_pred             EEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceEEEEEecCCCcEEEE-EeCCCCCC
Confidence            4543   2567899999988899999999999976665  4999998743221110      0  122222 56788999


Q ss_pred             cceEEEEEeecccCCCCcchhhhH
Q psy8774         372 GKRVERMEVRGRKGRGRPKKRWMD  395 (427)
Q Consensus       372 ~~~~~~v~a~~~~g~g~p~~~~~~  395 (427)
                      ..|.|+|||.+ .|.| +.+.|++
T Consensus       457 T~Y~~rVRA~~-~g~G-~WS~WS~  478 (488)
T 2q7n_A          457 TAYTFRVRCSS-KTFW-KWSRWSD  478 (488)
T ss_dssp             CCBBCCEEEEE-SSCS-SCCCCCC
T ss_pred             ceEEEEEEEEE-CCCC-CCCCCcC
Confidence            99999999999 8988 4555654

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=99.77  E-value=2.4e-17  Score=151.46  Aligned_cols=177  Identities=13%  Similarity=0.126  Sum_probs=126.2

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecCc------cceeEe-ecCcceEEEc--CCCCCceEEEEEEEEeccCcCccc
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREHT------LKENLV-NSKNMSFLIT--NLERGVEYEFRIAGQNHIGYGQET   77 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~------~~~~~~-~~~~~~~~~~--~L~p~t~Y~~~V~a~~~~g~~~~~   77 (427)
                      .+++.++|+++.+.+. ...|.|+|+.....      .|.... .....++.+.  +|.+++.|.|+|.|.|..|.+.+.
T Consensus       113 ~~~~~~~W~~~~~~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~  191 (313)
T 2d9q_B          113 TSSLICQWEPGPETHL-PTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSP  191 (313)
T ss_dssp             TTEEEEEEECCSCCSS-CCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECC
T ss_pred             CccEEEEecCCCCCCC-ceeEEEEEEecCCCcccCCcccccCCCCCCCcEEEECccccccceeEEEEEEEECCCCCccCc
Confidence            5789999999886444 45799999875431      232222 2334566664  599999999999999999987544


Q ss_pred             ceEEeCCCCCCCCCCeeeEEEee------cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEE
Q psy8774          78 VRYYTTPEGPPTGPPANISHHFQ------TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAV  148 (427)
Q Consensus        78 ~~~~~t~~~~p~~~p~~~~~~~~------~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~  148 (427)
                      ...+.+....++.+|.++.+...      ..+.+.|+|++|.  ..++.+.+|.|+|+...+...|....   ...+.+.
T Consensus       192 ~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~--~~~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~  269 (313)
T 2d9q_B          192 QLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQ--PGLHINQKCELRHKPQRGEASWALVGPLPLEALQYE  269 (313)
T ss_dssp             CEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCG--GGTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEE
T ss_pred             cEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCC--CCCceeEEEEEEEccCCCCCCcEEcccccCcceEEE
Confidence            55565555566788999887765      4689999999984  22233579999999432334444322   3467899


Q ss_pred             EccCCCCcEEEEEEEEeeCCCCCC---CCCCeEEEcccccC
Q psy8774         149 FSNLEEGIEYSAEVQAITKAGPGP---WSPKLSLMTARDMV  186 (427)
Q Consensus       149 i~~L~p~t~Y~~~V~a~~~~g~~~---~s~~~~~~t~~~~p  186 (427)
                      |.+|.|++.|.|+|+|.|..|.|.   +|..+.++|.+++|
T Consensus       270 l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P  310 (313)
T 2d9q_B          270 LCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAA  310 (313)
T ss_dssp             ECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC---
T ss_pred             EeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCC
Confidence            999999999999999999987775   67778888866554

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}

Probab=99.76  E-value=2.6e-17  Score=140.69  Aligned_cols=178  Identities=18%  Similarity=0.278  Sum_probs=132.0

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      +|+++.+...+. ...|.|++|.  +.++.+ .|.|+|..-  + .+.  +.....+.+.|.+|.+++.|.++|+|.++.
T Consensus         4 ~P~nv~~~s~n~-~~iL~W~pp~--~~~~~v-~Y~V~y~~~--~-~w~~~c~~~~~~~c~lt~l~~~~~Y~~rV~A~~~~   76 (201)
T 3lqm_A            4 PPENVRMNSVNF-KNILQWESPA--FAKGQL-TFTAQYLSY--R-IFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFAD   76 (201)
T ss_dssp             CCEEEEEEEETT-EEEEEEECCC--CSSSCC-EEEEEEEET--T-EEEEEEEEESSSEEECTTSCSSSCEEEEEEEEETT
T ss_pred             CCcccEEEEECC-ceEEEECCCC--CCCCCe-EEEEEEEEC--C-CcccCcCccCCCEEECCCCccCCCEEEEEEEecCC
Confidence            689999887665 5679999994  444555 599999875  2 232  233557899999999999999999999988


Q ss_pred             CCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCCC-C---------ceeEEEEEEEecccccccccccc
Q psy8774         169 GPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAGR-G---------KILGYQIFYTMTAVEDLDEWSQK  237 (427)
Q Consensus       169 g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~-g---------~i~~Y~I~~~~~~~~~~~~~~~~  237 (427)
                      |.|.++.. .+.. ....+.+| .+.+. ...++|.|.|.+|...+ |         .+..|+|.|+..+...  ..   
T Consensus        77 ~~S~~s~~-~f~~~~~t~~~PP-~v~~~-~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~--~~---  148 (201)
T 3lqm_A           77 EHSDWVQI-TFSPVDDTIIGPP-GMQVE-VLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDE--KF---  148 (201)
T ss_dssp             EECCCEEE-EECHHHHSBCCCC-EEEEE-EETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCC--CE---
T ss_pred             CcCcceee-eeeecccCeeCCC-EEEEE-EeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCc--EE---
Confidence            87877653 4433 22344555 67874 45789999999986443 3         3689999998863211  11   


Q ss_pred             cccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEec--cCCCCCccceEEeecCC
Q psy8774         238 SIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTV--NGLGRLSGKVTVKVKPE  311 (427)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~--~G~g~~s~~~~~~t~~~  311 (427)
                                                  ........++|.+|+|++.|.|+|+|.+.  .|.|.+|.++.++|.+.
T Consensus       149 ----------------------------~~~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~  196 (201)
T 3lqm_A          149 ----------------------------QITPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD  196 (201)
T ss_dssp             ----------------------------EECCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred             ----------------------------EEEecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence                                        12234567899999999999999999996  67999999999998654

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}

Probab=99.73  E-value=6.1e-17  Score=155.83  Aligned_cols=225  Identities=12%  Similarity=0.045  Sum_probs=149.8

Q ss_pred             CcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCC-cceeEE
Q psy8774          46 KNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRN-GQIVLY  124 (427)
Q Consensus        46 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~-~~i~~Y  124 (427)
                      ...+++|.+|.....+.+.+.+.+   .+......+..  ..|+.+|.++.+...+...+.++|.++...... ..+..|
T Consensus       249 ~~~~L~I~nl~~sd~g~y~~~C~~---~~~i~~~~l~v--~~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y  323 (488)
T 2q7n_A          249 QTVAIHILNIPVSENSGTNIIFIT---DDDVYGTVVFA--GYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEY  323 (488)
T ss_dssp             SCEEEECCSCCCCCSSCEEEEEEE---SSCEEEEEEEE--ECCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEE
T ss_pred             eEEEEEEeCCCcccCCcEEEEEEc---CCeEEEEEEEe--eCCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeE
Confidence            345677888876433222334442   12111122222  346677899999988889999999998532112 256799


Q ss_pred             EEEEEEccCCCceEEEe-----eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeee
Q psy8774         125 NVKFHKKIDANNVIHRN-----TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATS  198 (427)
Q Consensus       125 ~v~~~~~~~~~~~~~~~-----~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~  198 (427)
                      .|.|+..+  .......     .....+.+..+..++.|.|+|.|.|..|.+ .+ .+.+.+ ...+|.+|.++++...+
T Consensus       324 ~L~y~~~g--~~~~c~~~~~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~-~S-~~~~~~~~~v~P~PP~nl~v~~~s  399 (488)
T 2q7n_A          324 TLFESISG--KSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQA-QS-AVVINVTERVAPHDPTSLKVKDIN  399 (488)
T ss_dssp             EEEETTTC--CEEEEECSSCCCSSCEEEEEECCSSCCCCEEEEEEEETTEEE-EE-EEECCGGGTBCCCCCEEEEEEECS
T ss_pred             EEEEEECC--CCCCCccccccCCceEEEEEcCCCCccEEEEEEEEEeCCCCc-cc-eEEEEecCCCCCCCCeEEEEEecC
Confidence            99987552  2211111     224567775554469999999999999885 34 444444 33568999999999888


Q ss_pred             CcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccC-CCCce--e
Q psy8774         199 DQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVP-LTESA--E  275 (427)
Q Consensus       199 ~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~  275 (427)
                      .+++.|+|++|...++.+.+|+|+|+..+.   ..|..                           ...... ...++  .
T Consensus       400 ~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~---~~w~~---------------------------~~~~~~~~~~~~~v~  449 (488)
T 2q7n_A          400 STVVTFSWYLPGNFTKINLLCQIEICKANS---KKEVR---------------------------NATIRGAEDSTYHVA  449 (488)
T ss_dssp             TTCEEEEEEEEEECSSSEEEEEEEEBCTTS---CCEEE---------------------------EEEEECCEEEEEEEE
T ss_pred             CCEEEEEEeCCCCCCCcceEEEEEEEECCC---CCceE---------------------------EEEEecCCCcEEEEE
Confidence            999999999997667889999999987632   12200                           000111 12345  8


Q ss_pred             ccCCCCCCeEEEEEEEEeccCC---CCCccceEEeecC
Q psy8774         276 LTSLEKFTEYAVAVAARTVNGL---GRLSGKVTVKVKP  310 (427)
Q Consensus       276 l~~L~p~t~Y~~~V~a~~~~G~---g~~s~~~~~~t~~  310 (427)
                      |.+|.|++.|.|+|+|.+ .|.   |.+|..+.++|.+
T Consensus       450 l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~e  486 (488)
T 2q7n_A          450 VDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTTE  486 (488)
T ss_dssp             ECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCCC
T ss_pred             eCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEECCC
Confidence            999999999999999999 776   5778888888743

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.73  E-value=1e-17  Score=132.76  Aligned_cols=125  Identities=22%  Similarity=0.314  Sum_probs=103.2

Q ss_pred             EEEEeeCCCCCCCCC-CeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccc
Q psy8774         161 EVQAITKAGPGPWSP-KLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI  239 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~-~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~  239 (427)
                      .|+|.|..|.|..|. .+.++|..+.|.+|.++++...+.+++.|+|++|...+|.+.+|+|+|+..+... ..+.    
T Consensus         2 sV~A~n~~G~g~~S~~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~-~~~~----   76 (130)
T 1wfo_A            2 SSGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTA-NTAT----   76 (130)
T ss_dssp             CCCCCCCCCCCCCCCCCSCCCCSCCCCCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCC-SCCC----
T ss_pred             eeEEEecccCCCCCCCcEEEEcCCCCCCCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCC-ceEE----
Confidence            377899999998887 4888888888899999999999999999999999877889999999999863211 1110    


Q ss_pred             cccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         240 PLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                                              ........++++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.+..+|
T Consensus        77 ------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp  127 (130)
T 1wfo_A           77 ------------------------VEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSGP  127 (130)
T ss_dssp             ------------------------EEEECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCCC
T ss_pred             ------------------------EEEeCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCCC
Confidence                                    113345678999999999999999999999999999999889988665554

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}

Probab=99.73  E-value=5.8e-16  Score=148.05  Aligned_cols=347  Identities=15%  Similarity=0.186  Sum_probs=213.1

Q ss_pred             EEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCCCCCC
Q psy8774           9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPP   88 (427)
Q Consensus         9 sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p   88 (427)
                      .+..+|+++.. .+....|.|.|..   .. ........+.+.|..|.++. +.+.|-.....|...+..+........-
T Consensus        11 ~~~c~w~~~~~-~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (483)
T 3e0g_A           11 VWQCSWKAPSG-TGRGTDYEVCIEQ---RS-RSCYQLEKTSIKIPALSHGD-YEITINSLHDFGSSTSKFTLNEQNVSLI   84 (483)
T ss_dssp             EEEEBCCCCSS-SCSSCCEEEEECS---SS-CEEEEESSSBCCEECCSSSC-CCEEEECSSCC----CCCEECCSCCEEC
T ss_pred             EEEEeccCCCC-CCCCceEEEEEeC---Cc-ccchhhhccceEeecCCccc-eEEEEcccCCCCCCceeEEEEcccceec
Confidence            45678999863 2344679998643   11 12224467788899999998 6666665444444333332222222233


Q ss_pred             CCCCeeeEEEeecC-CEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--ee----e--e-EEEEccC-CCCcE
Q psy8774          89 TGPPANISHHFQTP-DVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TT----Q--T-KAVFSNL-EEGIE  157 (427)
Q Consensus        89 ~~~p~~~~~~~~~~-~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~----~--~-~~~i~~L-~p~t~  157 (427)
                      +.+|..+.+..... ..+.|+|......-....-..|.|+..........+...  .+    .  . .---.+| .+++.
T Consensus        85 p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~i~i~r~~~~~~v~~~~~~~~~~~~~~~~~w~w~s~~plec~~  164 (483)
T 3e0g_A           85 PDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWSWASDMPLECAI  164 (483)
T ss_dssp             CCCCCBCCCEEETTTTEEEEEEEECGGGCCSCCEEEEEEEEESSSSCEEEEEEEEEECGGGCCEEEEEEEECSSCTTSSC
T ss_pred             cCCCceEEEEecCCCcEEEEEEeCCCCCCCcccceEEEEEEEEcCCccEEEEEEEEEEecCCCceEEEEecCCCCCCCCc
Confidence            35688888887665 899999987632222234557888877662222222211  11    1  1 1112344 58899


Q ss_pred             EEEEEEEe-eC---CCC---CCCCCCeEEE---c----------------------------------------------
Q psy8774         158 YSAEVQAI-TK---AGP---GPWSPKLSLM---T----------------------------------------------  181 (427)
Q Consensus       158 Y~~~V~a~-~~---~g~---~~~s~~~~~~---t----------------------------------------------  181 (427)
                      |.++||+. +.   .|.   +.||....+.   .                                              
T Consensus       165 h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~~~~~ifP~~~vv~~GS~vt~~Ci~~~~~~~~~l~~~~~~~~~l~~~  244 (483)
T 3e0g_A          165 HFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDSQTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHLDGE  244 (483)
T ss_dssp             EEEEEEEEEECTTCCSEECCCCCCCCEEECCCCCSSCCEESCSEEEETTCCEEEEECCSSCEEEEESSSCCBCCEECSSS
T ss_pred             cEEEEEEEecccccCCCCCCcCCCChhhccccCCCCcEEeccCCEEeCCCCEEEEEEeCccccceecCcccceeEEecCC
Confidence            99999998 22   222   2333211110   0                                              


Q ss_pred             ---------------------------------ccccCCCCCceEEEeeeCcEEEEEeeeCCCCC--Cc-eeEEEEEEEe
Q psy8774         182 ---------------------------------ARDMVRAPLGVKALATSDQSVEVWWKPVPAGR--GK-ILGYQIFYTM  225 (427)
Q Consensus       182 ---------------------------------~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~--g~-i~~Y~I~~~~  225 (427)
                                                       ...||.+|.++.+...+..++.++|+++...+  |. ...|.|+|+.
T Consensus       245 ~~~i~v~nl~~~~~sg~n~~C~~~~~~~g~~l~vg~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~  324 (483)
T 3e0g_A          245 NVAIKIRNISVSASSGTNVVFTTEDNIFGTVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESF  324 (483)
T ss_dssp             CEEEEECSCCCCCSSCEEEEEEESSCEEEEEEEEECCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETT
T ss_pred             EEEEEEeCCCCccCccceEEEecCCcccceEEECcCCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEE
Confidence                                             01347889999998888889999999987542  32 7899999875


Q ss_pred             cccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceE
Q psy8774         226 TAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT  305 (427)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~  305 (427)
                      .+..  ...   ..                        .....+....+.|.+|.+.+.|.|+|.|.|..|.+. +. ..
T Consensus       325 ~g~~--~~C---~~------------------------~~~~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~-S~-~~  373 (483)
T 3e0g_A          325 SGKY--VRL---KR------------------------AEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQ-ST-IL  373 (483)
T ss_dssp             TCCE--EEE---CC------------------------CSSCSCSCEEEEEECCTTCCCEEEEEEEECSSCEEE-EE-EE
T ss_pred             CCCC--ccc---cC------------------------CcccCCCEEEEEEccCCCCcEEEEEEEEEeCCCCcc-cc-eE
Confidence            4111  111   00                        000112344678899999999999999999998766 33 44


Q ss_pred             Eee---cCCCCCcceEEeecCCCeEEEEecCCCcCCC--ceEEEEEeheeecc-eeee-------eeEEEEeeccccccc
Q psy8774         306 VKV---KPEDVPLSLRAHDVSTHSMTLSWSPPIKLNP--VKYKEVSEKIQERR-LQKY-------GQYRYFETRDESYIG  372 (427)
Q Consensus       306 ~~t---~~~~~P~~l~~~~~~~~~v~l~W~~P~~~~g--~~Y~i~~~~~~~~~-l~~~-------t~y~~~~~~~~~~~~  372 (427)
                      +..   .++.||.++++...+.+.+.|+|++|...++  +.|+|.+....... ....       ..+. +...+|.+..
T Consensus       374 ~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~~vsv~~~~~~~~s-~~l~~L~PgT  452 (483)
T 3e0g_A          374 VNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYL-VALDKLNPYT  452 (483)
T ss_dssp             ECGGGGBCCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEEECCCBCCSSSBCC-CCCCSCCSSS
T ss_pred             EEeccccCCCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceEEEEEeccCCceeE-EEEeccCCCc
Confidence            442   3567899999988888999999999976555  49999986432211 1110       1111 2567789999


Q ss_pred             ceEEEEEeecccCCCCcchhhhH
Q psy8774         373 KRVERMEVRGRKGRGRPKKRWMD  395 (427)
Q Consensus       373 ~~~~~v~a~~~~g~g~p~~~~~~  395 (427)
                      .|.|+|||. ..|.| .++.|+.
T Consensus       453 ~Y~vrVRA~-~~g~g-~WSeWS~  473 (483)
T 3e0g_A          453 LYTFRIRCS-TETFW-KWSKWSN  473 (483)
T ss_dssp             SCEEEEECC-CSSCC-CCCCCCC
T ss_pred             EEEEEEEEe-eCCCC-CcCCCCC
Confidence            999999999 66765 4555654

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A

Probab=99.73  E-value=3.3e-15  Score=137.88  Aligned_cols=219  Identities=12%  Similarity=0.101  Sum_probs=145.7

Q ss_pred             cceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEe-ecCCEEEEEeeCCCCCCCCcceeEEE
Q psy8774          47 NMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHF-QTPDVVCITWDPPLRTHRNGQIVLYN  125 (427)
Q Consensus        47 ~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~-~~~~~v~v~W~~p~~~~~~~~i~~Y~  125 (427)
                      ...+.|.++.....-.+.+.   ..|..... .....  ..|+..|. +.+.. .....+.|+|+++.  +. +...+|.
T Consensus        59 ~~~L~i~~v~~~d~G~Y~C~---~~g~~~~~-~~L~V--~~pP~~P~-l~c~~~~~~~~~~c~W~~~~--~~-~~~~~y~  128 (325)
T 1n26_A           59 GRRLLLRSVQLHDSGNYSCY---RAGRPAGT-VHLLV--DVPPEEPQ-LSCFRKSPLSNVVCEWGPRS--TP-SLTTKAV  128 (325)
T ss_dssp             SSEEEECSCCGGGCEEEEEE---SSSSCSCE-EEEEE--CCCCCCCC-CEEEBSSTTSCEEEEECCSS--CC-CTTCEEE
T ss_pred             cceEEecccchhhCeEeEEE---eCCEEeee-EEEEe--ccCCCCCc-eeEEeecCCCcEEEEECCCC--CC-CCCceEE
Confidence            35688888876544444444   23432222 22222  12445676 77663 34679999999874  22 3457899


Q ss_pred             EEEEEccCC-C-ceE--EE---eeeeeEEEEccCC-CCcEEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEe
Q psy8774         126 VKFHKKIDA-N-NVI--HR---NTTQTKAVFSNLE-EGIEYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALA  196 (427)
Q Consensus       126 v~~~~~~~~-~-~~~--~~---~~~~~~~~i~~L~-p~t~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~  196 (427)
                      |.|+...+. . .+.  +.   .....++.|..+. +++.|.|+|.|.|..|.+ .+....+.. ....|.+|.++.+..
T Consensus       129 l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~-~s~~~~~~~~~~v~P~pP~~l~v~~  207 (325)
T 1n26_A          129 LLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSK-FSKTQTFQGCGILQPDPPANITVTA  207 (325)
T ss_dssp             EEEEEESSSSCEEEEEEEEEETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEE-ECCCEEEETTTCBCCCCCEEEEEEE
T ss_pred             EEEEEccCCCCCcccccCCCCCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCc-ccCcEEEeeccccCCCCCcceEEEE
Confidence            998764211 1 111  11   1235788898876 889999999999999986 455566655 445678999999988


Q ss_pred             eeC--cEEEEEeeeCCC--CCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc-ccCCC
Q psy8774         197 TSD--QSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK-SVPLT  271 (427)
Q Consensus       197 ~~~--~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  271 (427)
                      .+.  +++.|+|++|..  .++.+.+|+|+|+..+   ...|                             ... .....
T Consensus       208 ~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~---~~~W-----------------------------~~~~~~~~~  255 (325)
T 1n26_A          208 VARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAER---SKTF-----------------------------TTWMVKDLQ  255 (325)
T ss_dssp             CTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETT---CSCC-----------------------------EEEECGGGC
T ss_pred             ecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCC---CCCC-----------------------------EEEcccCCc
Confidence            753  599999999985  3456899999999862   2334                             211 12345


Q ss_pred             CceeccCCCCCCeEEEEEEEEeccCCCCCc---cceEEee
Q psy8774         272 ESAELTSLEKFTEYAVAVAARTVNGLGRLS---GKVTVKV  308 (427)
Q Consensus       272 ~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s---~~~~~~t  308 (427)
                      ++++|.+|.|++.|.|+|+|.|..|.|.+|   ..+..+|
T Consensus       256 ~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~  295 (325)
T 1n26_A          256 HHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP  295 (325)
T ss_dssp             SEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred             eEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence            688999999999999999999988866655   4444443

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}

Probab=99.71  E-value=6.2e-16  Score=132.06  Aligned_cols=170  Identities=16%  Similarity=0.240  Sum_probs=125.6

Q ss_pred             eEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCCCC
Q psy8774           8 VTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEG   86 (427)
Q Consensus         8 ~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~   86 (427)
                      .+..|+|++|.+.++.+ .|.|+|+..  ..|...- ....+.|.|++|.+++.|.|+|+|.++.|.|..+...+.....
T Consensus        15 ~~~iL~W~pp~~~~~~v-~Y~V~y~~~--~~w~~~c~~~~~~~c~lt~l~~~~~Y~~rV~A~~~~~~S~~s~~~f~~~~~   91 (201)
T 3lqm_A           15 FKNILQWESPAFAKGQL-TFTAQYLSY--RIFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFADEHSDWVQITFSPVDD   91 (201)
T ss_dssp             TEEEEEEECCCCSSSCC-EEEEEEEET--TEEEEEEEEESSSEEECTTSCSSSCEEEEEEEEETTEECCCEEEEECHHHH
T ss_pred             CceEEEECCCCCCCCCe-EEEEEEEEC--CCcccCcCccCCCEEECCCCccCCCEEEEEEEecCCCcCcceeeeeeeccc
Confidence            35679999998766655 599999875  2465332 6678899999999999999999999998877765433321111


Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCc---------ceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcE
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNG---------QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIE  157 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~---------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~  157 (427)
                      ...+|| .+.+. ...++|.|.|.+|... .++         .+..|.|.|.+.+.... .......+.+.|.+|.|++.
T Consensus        92 t~~~PP-~v~~~-~~~~si~v~w~~P~~~-~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~-~~~~~~~~~~~l~~L~p~t~  167 (201)
T 3lqm_A           92 TIIGPP-GMQVE-VLADCLHMRFLAPKIE-NEYETWTMKNVYNSWTYNVQYWKQGTDEK-FQITPQYDFEVLRNLEPWTT  167 (201)
T ss_dssp             SBCCCC-EEEEE-EETTEEEEEEECCEEE-CSSCEEEHHHHCTTCEEEEEEEETTCCCC-EEECCSSSEEEECSCCTTCE
T ss_pred             CeeCCC-EEEEE-EeCCEEEEEEcCCCcc-CCCcccCHHHhCCceEEEEEEEECCCCcE-EEEEecCceEEEecCCCCCc
Confidence            233556 67764 4568999999998522 123         36799999988744333 23345577899999999999


Q ss_pred             EEEEEEEeeC--CCCCCCCCCeEEEcccc
Q psy8774         158 YSAEVQAITK--AGPGPWSPKLSLMTARD  184 (427)
Q Consensus       158 Y~~~V~a~~~--~g~~~~s~~~~~~t~~~  184 (427)
                      |.|+|+|.+.  .|.|.+|....+.|..+
T Consensus       168 Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~  196 (201)
T 3lqm_A          168 YCVQVRGFLPDRNKAGEWSEPVCEQTTHD  196 (201)
T ss_dssp             EEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred             EEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence            9999999986  67888999999988543

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.71  E-value=3.7e-17  Score=128.45  Aligned_cols=117  Identities=28%  Similarity=0.342  Sum_probs=99.9

Q ss_pred             EEEEeeCCCCCCCCCCeEEEcccccCC-CCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEecccccccccccc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMTARDMVR-APLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQK  237 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t~~~~p~-~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~  237 (427)
                      +|+|.|..|.|+.|..+.+.|..+.|. +|.++++...+.+++.|+|++|..  .++.+.+|.|+|+.....   .+   
T Consensus         3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~---~~---   76 (124)
T 2ed9_A            3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRR---GE---   76 (124)
T ss_dssp             SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSS---CC---
T ss_pred             eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCC---cc---
Confidence            578999999999999999999777666 788999999999999999999986  578999999999986321   12   


Q ss_pred             cccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         238 SIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                                                ........++++|.+|.|++.|.|+|+|+|..|.|++|..+.++|.
T Consensus        77 --------------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~  122 (124)
T 2ed9_A           77 --------------------------METLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETP  122 (124)
T ss_dssp             --------------------------EEEECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECC
T ss_pred             --------------------------eEEecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECC
Confidence                                      2224456788999999999999999999999999999999999884

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=1.1e-16  Score=125.70  Aligned_cols=117  Identities=21%  Similarity=0.271  Sum_probs=94.0

Q ss_pred             CCCCCCCCeEEEcccccCC-CCCceEEE-eeeCcEEEEEeeeC--CCCCCceeEEEEEEEeccccccccccccccccccc
Q psy8774         169 GPGPWSPKLSLMTARDMVR-APLGVKAL-ATSDQSVEVWWKPV--PAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTES  244 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~-~p~~l~~~-~~~~~si~v~W~~p--~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~  244 (427)
                      |.|++|..+.++|.++.|. +|.++++. ..+.+++.|+|++|  ...+|.|.+|+|+|+.........+          
T Consensus         1 G~g~~S~~v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~----------   70 (124)
T 2dbj_A            1 GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKEL----------   70 (124)
T ss_dssp             CCSCCCCCCCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEE----------
T ss_pred             CcCCCCCCEEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccce----------
Confidence            5678899999999877775 88999998 57889999999999  5567899999999975422111222          


Q ss_pred             ccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         245 SNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                                         ........++++|.+|.+++.|.|+|+|+|..|.|++|..+.++|.+...|
T Consensus        71 -------------------~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~~p  121 (124)
T 2dbj_A           71 -------------------LEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHSGP  121 (124)
T ss_dssp             -------------------EEEEESTTSCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSCCC
T ss_pred             -------------------EEEeCCCcceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCCC
Confidence                               222345667899999999999999999999999999999999999765554

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A

Probab=99.70  E-value=2.3e-15  Score=138.89  Aligned_cols=173  Identities=14%  Similarity=0.182  Sum_probs=127.6

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecCc---cc-eeEe---ecCcceEEEcCCC-CCceEEEEEEEEeccCcCcccc
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREHT---LK-ENLV---NSKNMSFLITNLE-RGVEYEFRIAGQNHIGYGQETV   78 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~-~~~~---~~~~~~~~~~~L~-p~t~Y~~~V~a~~~~g~~~~~~   78 (427)
                      ..++.++|+++.+.+ ....|.|.|+...+.   .| ....   .....++.+..+. +++.|.|+|.|.|..|.+....
T Consensus       108 ~~~~~c~W~~~~~~~-~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~~  186 (325)
T 1n26_A          108 LSNVVCEWGPRSTPS-LTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKT  186 (325)
T ss_dssp             TSCEEEEECCSSCCC-TTCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEEECCC
T ss_pred             CCcEEEEECCCCCCC-CCceEEEEEEEccCCCCCcccccCCCCCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCcccCc
Confidence            568999999887544 457899999875321   22 2221   2345788898876 8999999999999999875444


Q ss_pred             eEEeCCCCCCCCCCeeeEEEeec--CCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCC
Q psy8774          79 RYYTTPEGPPTGPPANISHHFQT--PDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEE  154 (427)
Q Consensus        79 ~~~~t~~~~p~~~p~~~~~~~~~--~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p  154 (427)
                      ..+.+....++.+|.++.+...+  ++++.|+|++|...+.++.+.+|.|+|+... ...|....  ...+++.|.+|.|
T Consensus       187 ~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~-~~~W~~~~~~~~~~~~~l~~L~p  265 (325)
T 1n26_A          187 QTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAER-SKTFTTWMVKDLQHHCVIHDAWS  265 (325)
T ss_dssp             EEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETT-CSCCEEEECGGGCSEEEESSCCT
T ss_pred             EEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCC-CCCCEEEcccCCceEEEEeCCCC
Confidence            45555555667889999988765  3699999999964334567889999999873 23444333  3468899999999


Q ss_pred             CcEEEEEEEEeeCCCCCCC---CCCeEEEc
Q psy8774         155 GIEYSAEVQAITKAGPGPW---SPKLSLMT  181 (427)
Q Consensus       155 ~t~Y~~~V~a~~~~g~~~~---s~~~~~~t  181 (427)
                      ++.|.|+|+|.|..|.|.+   |..+..++
T Consensus       266 ~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~  295 (325)
T 1n26_A          266 GLRHVVQLRAQEEFGQGEWSEWSPEAMGTP  295 (325)
T ss_dssp             TCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred             CCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence            9999999999998887655   55555555

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=2e-16  Score=126.01  Aligned_cols=127  Identities=28%  Similarity=0.311  Sum_probs=100.1

Q ss_pred             CCCCCCCCeEEEcccccCC-CCCceEEEeeeCcEEEEEeeeC--CCCCCceeEEEEEEEecccccccccccccccccccc
Q psy8774         169 GPGPWSPKLSLMTARDMVR-APLGVKALATSDQSVEVWWKPV--PAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS  245 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~-~p~~l~~~~~~~~si~v~W~~p--~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~  245 (427)
                      |.|++|..+.++|..+.|. +|.++++...+.+++.|+|++|  ...+|.+.+|.|+|+..+.......   .       
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~---~-------   70 (134)
T 2edx_A            1 GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRH---V-------   70 (134)
T ss_dssp             CCCCCCCCCCCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCE---E-------
T ss_pred             CCCCCcCCEEEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccE---E-------
Confidence            6678899999999877776 8899999999999999999999  5567899999999987633211111   0       


Q ss_pred             cceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC---CCCCcceEEeec
Q psy8774         246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP---EDVPLSLRAHDV  322 (427)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~---~~~P~~l~~~~~  322 (427)
                                        ........++++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|..   ..+|.+|++..+
T Consensus        71 ------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~  132 (134)
T 2edx_A           71 ------------------VDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVESGPS  132 (134)
T ss_dssp             ------------------ECCCBTTCSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCSSCCCCCCCCCCCC
T ss_pred             ------------------EEeeCCCccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCCCCCCCceeEEEEc
Confidence                              11123567899999999999999999999999999999999998853   246778877654


Q ss_pred             C
Q psy8774         323 S  323 (427)
Q Consensus       323 ~  323 (427)
                      +
T Consensus       133 s  133 (134)
T 2edx_A          133 S  133 (134)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.69  E-value=4.7e-16  Score=123.85  Aligned_cols=127  Identities=25%  Similarity=0.347  Sum_probs=102.9

Q ss_pred             CcCccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-EEE---eeeeeE
Q psy8774          72 GYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-IHR---NTTQTK  146 (427)
Q Consensus        72 g~~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~---~~~~~~  146 (427)
                      |.|+.+ ...+.|.+.+|..+|.++++...+.+++.|+|++|...+.++.+.+|.|+|+..+..... ...   ....++
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 2edx_A            1 GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSS   80 (134)
T ss_dssp             CCCCCCCCCCCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSE
T ss_pred             CCCCCcCCEEEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccE
Confidence            445544 456778888887789999999999999999999996556778899999999887433322 222   244789


Q ss_pred             EEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccC-CCCCceEEEeee
Q psy8774         147 AVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMV-RAPLGVKALATS  198 (427)
Q Consensus       147 ~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p-~~p~~l~~~~~~  198 (427)
                      +.|.+|.|++.|.|+|+|.|..|.|++|..+.++|..++| .+|.++++..++
T Consensus        81 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~s  133 (134)
T 2edx_A           81 WDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVESGPSS  133 (134)
T ss_dssp             EEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCSSCCCCCCCCCCCCC
T ss_pred             EEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCCCCCCCceeEEEEcc
Confidence            9999999999999999999999999999999999988777 789998876543

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A

Probab=99.69  E-value=5.7e-16  Score=135.71  Aligned_cols=183  Identities=17%  Similarity=0.245  Sum_probs=123.5

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcc-eeEEEEEEEEccCCC---ceEEEe------eeeeEEEEccCCCCc
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ-IVLYNVKFHKKIDAN---NVIHRN------TTQTKAVFSNLEEGI  156 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~-i~~Y~v~~~~~~~~~---~~~~~~------~~~~~~~i~~L~p~t  156 (427)
                      .|+..|.++.+...+...+.++|++..  +.+.. ...|.|.|.......   ......      .....+...+|.+++
T Consensus        28 ~pP~~P~~l~C~~~~~~~~~c~W~p~~--~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~  105 (236)
T 1axi_B           28 NSSGEPKFTKCRSPERETFSCHWTDEV--HHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAI  105 (236)
T ss_dssp             ----CCCEEEEEBSSSSCEEEEECCC----------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSS
T ss_pred             CCCCCCcCCeEEeCCCCEEEEEecCCC--CCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccc
Confidence            466779999888888899999999753  22112 247888887652211   111111      123445566799999


Q ss_pred             EEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceE--EEeeeC----cEEEEEeeeCCCC---CC-ceeEEEEEEEe
Q psy8774         157 EYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVK--ALATSD----QSVEVWWKPVPAG---RG-KILGYQIFYTM  225 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~--~~~~~~----~si~v~W~~p~~~---~g-~i~~Y~I~~~~  225 (427)
                      .|.|+|.| | .+   .+....+.. ....|.+|.++.  +...+.    ..+.|+|++|...   +| .+..|+|+|+.
T Consensus       106 ~Y~~~V~a-N-~~---~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~  180 (236)
T 1axi_B          106 PYCIKLTS-N-GG---TVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKE  180 (236)
T ss_dssp             EEEEEEEE-T-TE---EEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEE
T ss_pred             eEEEEEEE-C-Cc---cCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEE
Confidence            99999999 7 22   344455544 345678999995  434332    3599999999743   45 67899999998


Q ss_pred             cccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC--CCCCccc
Q psy8774         226 TAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG--LGRLSGK  303 (427)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G--~g~~s~~  303 (427)
                      .+   ...|                             ........+++.|.+|+|++.|.|+|||....|  .|.+|..
T Consensus       181 ~~---~~~w-----------------------------~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~  228 (236)
T 1axi_B          181 VN---ETKW-----------------------------KMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEV  228 (236)
T ss_dssp             TT---CSSC-----------------------------EECCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCC
T ss_pred             CC---CCce-----------------------------EEEeccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCC
Confidence            73   2333                             222333467899999999999999999999988  9999999


Q ss_pred             eEEee
Q psy8774         304 VTVKV  308 (427)
Q Consensus       304 ~~~~t  308 (427)
                      +.++|
T Consensus       229 ~~~~~  233 (236)
T 1axi_B          229 LYVTL  233 (236)
T ss_dssp             EEECC
T ss_pred             EEEEC
Confidence            88887

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}

Probab=99.68  E-value=3.2e-16  Score=149.81  Aligned_cols=190  Identities=14%  Similarity=0.150  Sum_probs=138.8

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcc-eeEEEEEEEEccCCCceEEEe-----eeeeEEEEccCCCCcEEEE
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ-IVLYNVKFHKKIDANNVIHRN-----TTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~-i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~~i~~L~p~t~Y~~  160 (427)
                      .|+.+|+++.+...+...+.++|+++.....+|. ...|.|.|+..  +.......     .....+.+.+|.+.+.|.|
T Consensus       280 ~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~--g~~~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f  357 (483)
T 3e0g_A          280 YPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFS--GKYVRLKRAEAPTNESYQLLFQMLPNQEIYNF  357 (483)
T ss_dssp             CCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTT--CCEEEECCCSSCSCSCEEEEEECCTTCCCEEE
T ss_pred             CCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEEC--CCCccccCCcccCCCEEEEEEccCCCCcEEEE
Confidence            4678899999998888899999999853332343 77999998754  22222211     1356889999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSI  239 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~  239 (427)
                      +|.|.|..|.+. +. ..+.. ....|.+|.++++...+.+.+.|+|++|...++.+..|+|+|+..+...  .+..  .
T Consensus       358 ~V~A~N~lG~~~-S~-~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~--~~~~--v  431 (483)
T 3e0g_A          358 TLNAHNPLGRSQ-ST-ILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQ--EQRN--V  431 (483)
T ss_dssp             EEEEECSSCEEE-EE-EEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCC--CEEE--C
T ss_pred             EEEEEeCCCCcc-cc-eEEEeccccCCCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCC--ceEE--E
Confidence            999999988764 33 44443 3456789999999888889999999999765667899999999863211  1100  0


Q ss_pred             cccccccceeEEeeecccccccccccc-ccCCCCceeccCCCCCCeEEEEEEEEeccCC---CCCccceEEeec
Q psy8774         240 PLTESSNIARIFYTMTAVEDLDEWSQK-SVPLTESAELTSLEKFTEYAVAVAARTVNGL---GRLSGKVTVKVK  309 (427)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~---g~~s~~~~~~t~  309 (427)
                                              ... ......++.|.+|.|++.|.|+|+|. ..|.   |.+|.++.++|.
T Consensus       432 ------------------------sv~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~  480 (483)
T 3e0g_A          432 ------------------------TIQGVENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTT  480 (483)
T ss_dssp             ------------------------CCBCCSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCC
T ss_pred             ------------------------EEeccCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECC
Confidence                                    000 01223467899999999999999999 6665   777888888874

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.68  E-value=5.3e-16  Score=120.79  Aligned_cols=115  Identities=24%  Similarity=0.229  Sum_probs=91.8

Q ss_pred             CCCCCCCCeEEEcccccCC-CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccc
Q psy8774         169 GPGPWSPKLSLMTARDMVR-APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI  247 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~-~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (427)
                      |.|++|..+.+.|.++.|. +|.++++...+.+++.|+|++|..  +.+.+|+|+|+..+.......             
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~--g~i~~Y~v~~~~~~~~~~~~~-------------   65 (119)
T 2ee2_A            1 GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLE--KIVESYQIRYWAAHDKEEAAN-------------   65 (119)
T ss_dssp             CCCCCSSCCCCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCSC--TTCCEEEEEEEESSSCGGGCE-------------
T ss_pred             CCCCCCCCEEEECCCcCCCCCCCcEEEEEccCCEEEEEecCCCC--CccceEEEEEEECCCcccCcE-------------
Confidence            6678899999999776664 788999999999999999999985  889999999987632111100             


Q ss_pred             eeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                                      ........++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|....+|
T Consensus        66 ----------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp  116 (119)
T 2ee2_A           66 ----------------RVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASGP  116 (119)
T ss_dssp             ----------------EEEEETTCSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCCS
T ss_pred             ----------------EEEcCCCEeEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCCC
Confidence                            112334567899999999999999999999999999999999998654443

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.68  E-value=3.1e-16  Score=123.12  Aligned_cols=120  Identities=27%  Similarity=0.379  Sum_probs=100.5

Q ss_pred             EEEEEeccCcCccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEee
Q psy8774          64 RIAGQNHIGYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT  142 (427)
Q Consensus        64 ~V~a~~~~g~~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~  142 (427)
                      +|+|.|..|.|+.+ ...+.|.+.+|..+|.++++...+.+++.|+|++|.....++.+.+|.|+|+.............
T Consensus         3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~   82 (124)
T 2ed9_A            3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMETLEP   82 (124)
T ss_dssp             SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEEECS
T ss_pred             eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEEecC
Confidence            47889999998765 45677778888878999999999999999999999644467899999999998744433333445


Q ss_pred             eeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEccc
Q psy8774         143 TQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR  183 (427)
Q Consensus       143 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~  183 (427)
                      ..+++.|.+|.|++.|.|+|+|.|..|.|++|..+.++|.+
T Consensus        83 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e  123 (124)
T 2ed9_A           83 NNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE  123 (124)
T ss_dssp             SCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred             CcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence            68899999999999999999999999999999999998854

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.66  E-value=2.7e-16  Score=122.86  Aligned_cols=113  Identities=27%  Similarity=0.415  Sum_probs=92.9

Q ss_pred             CCCCCCCCeEEEcccccC-CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccc
Q psy8774         169 GPGPWSPKLSLMTARDMV-RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI  247 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p-~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (427)
                      |.|++|..+.++|..+.| .+|.++++...+.+++.|+|++|...+|.+.+|.|+|+.........+             
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-------------   67 (121)
T 2dlh_A            1 GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNW-------------   67 (121)
T ss_dssp             CCCCCCSSSCSCCCCCCCCSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTS-------------
T ss_pred             CCCCCCCCEEEECCCcCCCCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCcccc-------------
Confidence            667889999999977666 599999999999999999999998778899999999986532221222             


Q ss_pred             eeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                                      ........++++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.+
T Consensus        68 ----------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  114 (121)
T 2dlh_A           68 ----------------MKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQT  114 (121)
T ss_dssp             ----------------CCCCCSSCSEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred             ----------------EEEecCCceEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCC
Confidence                            22234467789999999999999999999999999999999999853

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.65  E-value=6.9e-16  Score=120.14  Aligned_cols=116  Identities=22%  Similarity=0.244  Sum_probs=93.7

Q ss_pred             CCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccce
Q psy8774         169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA  248 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (427)
                      |.|++|..+.++|..+.|.+|.++++...+.+++.|+|++|...+|.+.+|+|+|+..+.... ..              
T Consensus         1 G~g~~S~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~-~~--------------   65 (119)
T 1wfn_A            1 GSSGSSGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT-RV--------------   65 (119)
T ss_dssp             CCCCCSCCCSCCSSCCSCCCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG-CC--------------
T ss_pred             CCCCCCCCEEEECCCCCCCCCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCc-eE--------------
Confidence            567889999999988899999999999999999999999998778899999999998632111 00              


Q ss_pred             eEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                                     ........++++|.+|.|++.|.|+|+|+|..|.|.+|..+.....|+..|
T Consensus        66 ---------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~~pp~~P  116 (119)
T 1wfn_A           66 ---------------THYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPSGP  116 (119)
T ss_dssp             ---------------CEEECSSCCEEEEESCCTTCEEEEEEEEECSSCEEEEEEEEEECCCCCCSS
T ss_pred             ---------------EEEeCCCceEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEccCCCCCC
Confidence                           122345678999999999999999999999999999998763333344444

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.65  E-value=1.2e-15  Score=118.91  Aligned_cols=116  Identities=24%  Similarity=0.308  Sum_probs=93.4

Q ss_pred             CCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCC-CCCCceeEEEEEEEecccccccccccccccccccccce
Q psy8774         170 PGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVP-AGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA  248 (427)
Q Consensus       170 ~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~-~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (427)
                      .+..+..+.+.|...+|.+|.++++...+.+++.|+|++|. ..+|.+.+|+|+|+.....   .+..            
T Consensus         2 ~sgss~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~---~~~~------------   66 (120)
T 1x5f_A            2 SSGSSGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIA---RERV------------   66 (120)
T ss_dssp             CCCCCSSCCCCCCCCCCCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCC---CCEE------------
T ss_pred             CCCCCCCEEecCCCCCCCCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCC---CceE------------
Confidence            34456667777888889999999999999999999999998 6778999999999886321   1100            


Q ss_pred             eEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCc
Q psy8774         249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPL  315 (427)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~  315 (427)
                                     ........++++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.+..+|.
T Consensus        67 ---------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pPs  118 (120)
T 1x5f_A           67 ---------------ENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESGPS  118 (120)
T ss_dssp             ---------------EECSSTTCSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCCSC
T ss_pred             ---------------EEeccCCccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCCCC
Confidence                           1122345789999999999999999999999999999999999997666653

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.64  E-value=7.8e-16  Score=122.21  Aligned_cols=112  Identities=24%  Similarity=0.332  Sum_probs=92.9

Q ss_pred             CCCCCCCCeEEEcccccCC-CCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEecccccccccccccccccccc
Q psy8774         169 GPGPWSPKLSLMTARDMVR-APLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS  245 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~-~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~  245 (427)
                      |.|++|..+.++|..+.|. +|.++++...+.+++.|+|++|..  .+|.+.+|+|+|+.....   .+..         
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~---~~~~---------   68 (132)
T 1x5h_A            1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK---SDVT---------   68 (132)
T ss_dssp             CCCCCCCCCCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE---EEEE---------
T ss_pred             CcCCCCCCEEEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC---CccE---------
Confidence            5678899999999877776 789999999999999999999986  578999999999886321   1100         


Q ss_pred             cceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                                        ........++++|.+|+|++.|.|+|+|+|..|.|.+|..+.++|.+
T Consensus        69 ------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  115 (132)
T 1x5h_A           69 ------------------ETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFE  115 (132)
T ss_dssp             ------------------CCBCCTTCCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCS
T ss_pred             ------------------EEEeCCCccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCc
Confidence                              11234567899999999999999999999999999999999999854

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C

Probab=99.64  E-value=2.3e-13  Score=123.87  Aligned_cols=255  Identities=16%  Similarity=0.125  Sum_probs=164.0

Q ss_pred             cceEEEEEeeCCCCCC--CcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCc----Ccccce
Q psy8774           6 PEVTIELVWSQPTQTY--GEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGY----GQETVR   79 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~--~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~----~~~~~~   79 (427)
                      +...+.|+|++|....  ..-..|.|.|+..+.+.|...   .........|..|  |.++|++....|.    |..+..
T Consensus        24 ~~~~~~l~W~~~p~~~~~~~~l~Y~v~~~~~~~~~w~~~---~t~~~~~~~L~~~--~~~rVrt~~~~~~s~~~S~w~~~   98 (317)
T 3qt2_A           24 GLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETR---ITESKAVTILHMG--FSASVRTILQNDHSLLASSWASA   98 (317)
T ss_dssp             ETTEEEEEEECCTTSSCSSSCCEEEEEEEESSCEEEEES---SSEEEEECCCTTC--EEEEEEEEEECSSCEEECCCEEE
T ss_pred             CCceEEEEECCCCccccCcCcEEEEEEECCCCCcccEee---ccccccccccCCC--eEEEEEEEECCCCCccccccccc
Confidence            3578999999954222  234789999988877777743   3345557788776  8888998877664    334444


Q ss_pred             EEeCCCCCCCCCCeeeEEEeec-----------CCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----ee--
Q psy8774          80 YYTTPEGPPTGPPANISHHFQT-----------PDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NT--  142 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~-----------~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~--  142 (427)
                      .....++.|+..|.+|.+...+           ...+.++|++..  +. .....|.+.|+..  +....+.    ..  
T Consensus        99 ~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~--~~-~~~t~Y~L~y~~~--~~~~eC~~y~~~~~~  173 (317)
T 3qt2_A           99 ELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGT--DA-PEDTQYFLYYRYG--SWTEECQEYSMDTLG  173 (317)
T ss_dssp             EECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCT--TC-CTTCEEEEEEEET--TEEEECCCEEECTTS
T ss_pred             cccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeCCC--CC-CCCeeEEEEEEeC--CCCeeCCccccCCCc
Confidence            5555556677789999988766           478999999863  21 2345799999876  2111111    11  


Q ss_pred             eeeEEEEccCC----CCcEEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCC-CCce
Q psy8774         143 TQTKAVFSNLE----EGIEYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAG-RGKI  216 (427)
Q Consensus       143 ~~~~~~i~~L~----p~t~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~-~g~i  216 (427)
                      ....|.+....    ....|.|.|.+.+..+.- .+....+.. ....|.||.+|.+.. ..+.+.|+|++|... ....
T Consensus       174 ~~~~C~f~~~~~~~~~~~~~~i~V~gss~~~~i-~s~~~~~~l~~iVkp~PP~nL~v~~-~~~~l~v~W~~P~~~~~~~~  251 (317)
T 3qt2_A          174 RNIACWFPRTFILSKGRDWLAVLVNGSSKHSAI-RPFDQLFALHAIDQINPPLNVTAEI-EGTRMSIQWEKPVSAFPIHC  251 (317)
T ss_dssp             CEEEEEESSCSCCTTCCSEEEEEEEEECTTSCB-CCEEEEEEHHHHBCCCCCEEEEEEE-ETTEEEEEEECCSSSSCGGG
T ss_pred             ceeEEEeCCccccccCcEEEEEEEEcCCCCccc-cccceEEEHHHcCcCCCCceeEEEE-eCCcEEEEECCCCcccccCc
Confidence            13477787653    357888988876543321 222233333 345678999999985 468999999998632 1245


Q ss_pred             eEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEecc-
Q psy8774         217 LGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN-  295 (427)
Q Consensus       217 ~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~-  295 (427)
                      ..|+|.|+......  .+                             ....  ..+++.+ +|.|++.|.|+|||.... 
T Consensus       252 L~Yevryr~~~~~~--~~-----------------------------~~~~--~~~~~~l-~l~p~~~Y~vqVR~k~~~~  297 (317)
T 3qt2_A          252 FDYEVKIHNTRNGY--LQ-----------------------------IEKL--MTNAFIS-IIDDLSKYDVQVRAAVSSM  297 (317)
T ss_dssp             EEEEEEEEETTTCC--EE-----------------------------EEEE--SSSEEEE-ECCTTCCEEEEEEEEECTT
T ss_pred             eEEEEEEEeCCCCc--ce-----------------------------EEEE--eeeEEEe-ecCCCCEEEEEEEEeecCC
Confidence            68999998752211  11                             1111  2345655 499999999999999542 


Q ss_pred             ----C-CCCCccceEE
Q psy8774         296 ----G-LGRLSGKVTV  306 (427)
Q Consensus       296 ----G-~g~~s~~~~~  306 (427)
                          | .|.+|.++.+
T Consensus       298 ~~~~g~WSeWS~~~~~  313 (317)
T 3qt2_A          298 CREAGLWSEWSQPIYV  313 (317)
T ss_dssp             TSSCCCCCCCCCCEEE
T ss_pred             CCCCCCcCCCCCCEEE
Confidence                3 5566665554

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.63  E-value=1.3e-15  Score=119.66  Aligned_cols=115  Identities=19%  Similarity=0.182  Sum_probs=91.2

Q ss_pred             CCCCCCCCCCeEEEcccc------cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccccccccccc
Q psy8774         167 KAGPGPWSPKLSLMTARD------MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIP  240 (427)
Q Consensus       167 ~~g~~~~s~~~~~~t~~~------~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~  240 (427)
                      ..|.|++|..+.++|.++      +|.+|.++++...+ +++.|+|++|...+|.+.+|.|+|+.. .  ....      
T Consensus         3 ~~G~g~~S~~~~~~T~~~~~~~~~~P~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~-~--~~~~------   72 (126)
T 1x5i_A            3 SGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIG-S--PHAQ------   72 (126)
T ss_dssp             SCCCCCCCCCCCSCCCCTTSBCSSCCCSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSS-C--GGGE------
T ss_pred             CCccCCCCCCEEeECccccCccCCCCCCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcC-C--CCce------
Confidence            578889999999999876      88999999999986 999999999987788999999999842 1  1111      


Q ss_pred             ccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         241 LTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                                             ........++++|.+|.|++.|.|+|+|+|..|.|..+.....++...+.|
T Consensus        73 -----------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~~~~P  123 (126)
T 1x5i_A           73 -----------------------TIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTSGP  123 (126)
T ss_dssp             -----------------------EEECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCCTTCC
T ss_pred             -----------------------EEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceeeEEecccCCCCC
Confidence                                   122345678999999999999999999999999999887543333333334

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.63  E-value=2.5e-15  Score=114.88  Aligned_cols=104  Identities=21%  Similarity=0.284  Sum_probs=85.1

Q ss_pred             cccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         181 TARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       181 t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      |..++|.+|.++++...+.+++.|+|++|...+|.+.+|+|+|+..+......+                          
T Consensus         3 T~~~~P~~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--------------------------   56 (109)
T 2e7h_A            3 SGSSGPPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSV--------------------------   56 (109)
T ss_dssp             SSCCSSCCCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTS--------------------------
T ss_pred             CCCCCCCCCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCcee--------------------------
Confidence            456778889999999999999999999998778899999999988631111111                          


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                          .......++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+...|
T Consensus        57 ----~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p  106 (109)
T 2e7h_A           57 ----RFLKTSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSGP  106 (109)
T ss_dssp             ----EEEEESSSEEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCSSC
T ss_pred             ----EEEccCCCEEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCCCC
Confidence                11233456899999999999999999999999999999999999766655

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.63  E-value=2.1e-15  Score=117.17  Aligned_cols=111  Identities=16%  Similarity=0.130  Sum_probs=92.8

Q ss_pred             CCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccce
Q psy8774         169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA  248 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (427)
                      |.|.+|+.+.+.|...+|.+|.++++...+.+++.|+|.+|...++.+.+|.|+|+.....  ..|              
T Consensus         1 G~s~~S~~~~~~t~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~~--------------   64 (118)
T 1x3d_A            1 GSSGSSGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN--GEF--------------   64 (118)
T ss_dssp             CCCCCCCCCCCCCCCSCCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSS--SCC--------------
T ss_pred             CCCCCCcCEEEEcCCCCCcCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCC--CCe--------------
Confidence            5677899999999888899999999999999999999999986667899999999865221  223              


Q ss_pred             eEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                                     ........+++++.+|.|++.|.|+|+|.|..|.|.+|..+.+.|.+
T Consensus        65 ---------------~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~  111 (118)
T 1x3d_A           65 ---------------CQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSG  111 (118)
T ss_dssp             ---------------EEEEEESCSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSC
T ss_pred             ---------------EEeeccCCcEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCC
Confidence                           22233455789999999999999999999999999999999888843

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.62  E-value=4e-15  Score=115.76  Aligned_cols=110  Identities=21%  Similarity=0.319  Sum_probs=88.4

Q ss_pred             CeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeec
Q psy8774         176 KLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMT  255 (427)
Q Consensus       176 ~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (427)
                      ...+.+..++|.+|.++++...+.+++.|+|++|...++.+.+|.|+|+.....   .+..                   
T Consensus         8 ~~~~~~~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~-------------------   65 (119)
T 2ed7_A            8 KPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDN---RERA-------------------   65 (119)
T ss_dssp             CSSCCCSSSSCCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCC---CCEE-------------------
T ss_pred             CccCCCCCCCCcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCC---ccee-------------------
Confidence            344556777889999999999999999999999987778999999999876321   1100                   


Q ss_pred             cccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCc
Q psy8774         256 AVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPL  315 (427)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~  315 (427)
                              ........++++|.+|.|++.|.|+|+|+|..|.|.+|..+.+.|.+..+|.
T Consensus        66 --------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pPs  117 (119)
T 2ed7_A           66 --------LNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPESGPS  117 (119)
T ss_dssp             --------EECCCTTCCEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCCSCCC
T ss_pred             --------eEeecCCceEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCCCC
Confidence                    1122345778999999999999999999999999999999999987665553

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.62  E-value=1.4e-15  Score=120.33  Aligned_cols=123  Identities=21%  Similarity=0.293  Sum_probs=99.4

Q ss_pred             EEEEEeccCcCcccc--eEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE---
Q psy8774          64 RIAGQNHIGYGQETV--RYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI---  138 (427)
Q Consensus        64 ~V~a~~~~g~~~~~~--~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~---  138 (427)
                      .|+|.|..|.|..+.  ..+.|...+| .+|.++++...+.+++.|+|++|.  +.++.+.+|.|+|+..+......   
T Consensus         2 sV~A~n~~G~g~~S~~~~~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~~~~~~   78 (130)
T 1wfo_A            2 SSGSSGRIGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQPPA--APNGIILAYQITHRLNTTTANTATVE   78 (130)
T ss_dssp             CCCCCCCCCCCCCCCCCSCCCCSCCCC-CCCCCCEEEEECSSEEEEECCCCS--CCCSCCCEEEEEEEESSCCCSCCCEE
T ss_pred             eeEEEecccCCCCCCCcEEEEcCCCCC-CCCCceEEEecCCCEEEEEEcCCC--CCCCceEEEEEEEEECCCCCceEEEE
Confidence            367889999998664  6777777776 578899999999999999999984  66788999999999874332221   


Q ss_pred             EEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCC
Q psy8774         139 HRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       139 ~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      ......+.+.|.+|.|++.|.|+|+|.|..|.|.+|..+.++|....|..|
T Consensus        79 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp~p  129 (130)
T 1wfo_A           79 VLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSGPSS  129 (130)
T ss_dssp             EECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCCCCC
T ss_pred             EeCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCCCCC
Confidence            333558999999999999999999999999999999998898866554443

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.62  E-value=1.9e-15  Score=119.90  Aligned_cols=121  Identities=26%  Similarity=0.407  Sum_probs=96.0

Q ss_pred             CcCccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--EeeeeeEEE
Q psy8774          72 GYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTTQTKAV  148 (427)
Q Consensus        72 g~~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~  148 (427)
                      |.|+.+ ...+.|.+.+|..+|.++++...+.+++.|+|++|.....++.+.+|.|+|+..........  .....+++.
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~   80 (132)
T 1x5h_A            1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQL   80 (132)
T ss_dssp             CCCCCCCCCCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCCEEE
T ss_pred             CcCCCCCCEEEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEEEeCCCccEEE
Confidence            345444 45677888888878999999999999999999999644477899999999988632111111  224578999


Q ss_pred             EccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccc------cCCCCCce
Q psy8774         149 FSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD------MVRAPLGV  192 (427)
Q Consensus       149 i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~------~p~~p~~l  192 (427)
                      |.+|.|++.|.|+|+|.|..|.|++|..+.++|...      +|.+|.+|
T Consensus        81 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~~~~~~P~~P~~l  130 (132)
T 1x5h_A           81 IEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVSGPS  130 (132)
T ss_dssp             EECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSCCCCCCCCCCCCCC
T ss_pred             eCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcccCCcccCCCCCCCC
Confidence            999999999999999999999999999999999664      77777765

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.61  E-value=3.4e-15  Score=115.54  Aligned_cols=112  Identities=25%  Similarity=0.310  Sum_probs=89.4

Q ss_pred             CCCCCCCCeEEEcccccCC-CCCceEEEeeeCcEEEEEeeeC--CCCCCceeEEEEEEEecccccccccccccccccccc
Q psy8774         169 GPGPWSPKLSLMTARDMVR-APLGVKALATSDQSVEVWWKPV--PAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS  245 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~-~p~~l~~~~~~~~si~v~W~~p--~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~  245 (427)
                      |.|++|..+.++|.+++|. +|.++++.. +.++|.|+|++|  ...+|.+.+|+|+|+..+..   ..           
T Consensus         1 G~G~~S~~v~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~---~~-----------   65 (117)
T 1wj3_A            1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQN---NV-----------   65 (117)
T ss_dssp             CCCCCCCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCS---SC-----------
T ss_pred             CcCCCCCCEEEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCC---CC-----------
Confidence            5678899999999887775 788888877 889999999999  44689999999999876321   11           


Q ss_pred             cceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCc
Q psy8774         246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPL  315 (427)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~  315 (427)
                                         .......+++.+. |.+++.|.|+|+|+|..|.|++|..+.++|....+|.
T Consensus        66 -------------------~~~~~~~~~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v~p~  115 (117)
T 1wj3_A           66 -------------------QVLNTNKTSAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGPS  115 (117)
T ss_dssp             -------------------EEEEESSSEEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCCCSC
T ss_pred             -------------------eEEeCCCcEEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCCCC
Confidence                               0112234567777 9999999999999999999999999999996665553

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.61  E-value=4.6e-15  Score=113.27  Aligned_cols=103  Identities=25%  Similarity=0.364  Sum_probs=85.3

Q ss_pred             cccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         181 TARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       181 t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      |.+++|.+|.++++...+.+++.|+|++|...+|.+.+|+|+|+..+..   .+.                         
T Consensus         3 T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~---~~~-------------------------   54 (108)
T 2djs_A            3 SGSSGPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHN---EFN-------------------------   54 (108)
T ss_dssp             SCCCCCCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSC---STT-------------------------
T ss_pred             cCCCCCCCCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCC---Ccc-------------------------
Confidence            4567788999999999999999999999987788999999999886321   110                         


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                         ........++++|.+|.|++.|.|+|+|+|..|.|++|..+.++|.+...|
T Consensus        55 ---~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~~  105 (108)
T 2djs_A           55 ---SSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDSGP  105 (108)
T ss_dssp             ---CEEEEESSSEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSSCC
T ss_pred             ---eeEEecCccEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCCcc
Confidence               112235668999999999999999999999999999999999999766544

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=99.61  E-value=4.7e-14  Score=120.61  Aligned_cols=180  Identities=14%  Similarity=0.197  Sum_probs=128.6

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEE----ccCCCceEE----EeeeeeEEEEcc-CCCCcEEEEE
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHK----KIDANNVIH----RNTTQTKAVFSN-LEEGIEYSAE  161 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~----~~~~~~~~~----~~~~~~~~~i~~-L~p~t~Y~~~  161 (427)
                      +|.++++...+-. ..|+|+++.  .. .....|.|+|..    ..+...|..    .....+.|.|.+ |..+..|.+|
T Consensus         9 ~P~nv~~~s~n~~-~iL~W~p~~--~~-~~~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~~R   84 (206)
T 4doh_B            9 APQQLSVLSTNMK-HLLMWSPVI--AP-GETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLR   84 (206)
T ss_dssp             CCCCCEEEEETTE-EEEECCCCC--CS-SSCCEEEEEEEEHHHHHHSTTCCEEEEEEEEESSSEEECTTTCCSSSCEEEE
T ss_pred             CCCeeEEEEeCCE-EEEEECCCC--CC-CCCEEEEEEEEEeccccCCCccceecccccCCCCCEEcCCccccCCCCEEEE
Confidence            5899999887765 799999984  22 234689999995    112344443    235688999995 7789999999


Q ss_pred             EEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccc
Q psy8774         162 VQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPL  241 (427)
Q Consensus       162 V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~  241 (427)
                      |+|.+..+.+.++....+......-..|..+.+. ....+|.|.|.+|    +.+..|.|.|+..+......        
T Consensus        85 VrA~~~~~~S~w~~~~~f~~~~~t~i~PP~v~v~-~~~~~i~V~~~~p----~~~l~Y~v~y~~~~~~~~~~--------  151 (206)
T 4doh_B           85 VRATLGSQTSAWSILKHPFNRQSTILTRPGMEIT-KDGFHLVIELEDL----GPQFEFLVAYWRREPGAEEH--------  151 (206)
T ss_dssp             EEEEETTEECCCEECSSCBCGGGCBCCCCCEEEE-EETTEEEEEECCC----CTTCEEEEEEEESSSSCCCE--------
T ss_pred             EEEEcCCCccCccccccccchhhcccCCCeEEEE-eCCCEEEEEecCC----CCcEEEEEEEEEcCCCceeE--------
Confidence            9999988888776655554322222334447776 4788999999977    46789999999874322110        


Q ss_pred             cccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEecc--CCCCCccceEEeec
Q psy8774         242 TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN--GLGRLSGKVTVKVK  309 (427)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~--G~g~~s~~~~~~t~  309 (427)
                                            ........+.+.|.+|.|++.|.|+|+|....  |.|.+|....+.|.
T Consensus       152 ----------------------~~~~~~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C~~t~  199 (206)
T 4doh_B          152 ----------------------VKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQ  199 (206)
T ss_dssp             ----------------------EEEECCSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEEECC-
T ss_pred             ----------------------EeEEccCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEeEEcc
Confidence                                  01112335678999999999999999999864  78999998888874

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.61  E-value=1.3e-14  Score=112.77  Aligned_cols=114  Identities=18%  Similarity=0.321  Sum_probs=90.9

Q ss_pred             CcCccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-EEE--eeeeeEE
Q psy8774          72 GYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-IHR--NTTQTKA  147 (427)
Q Consensus        72 g~~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~--~~~~~~~  147 (427)
                      |.|+.+ ...+.|.+..|+.+|.++++...+.+++.|+|++|.  .  +.+.+|.|+|+..+..... ...  ....+++
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~--~--g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~   76 (119)
T 2ee2_A            1 GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVL--E--KIVESYQIRYWAAHDKEEAANRVQVTSQEYSA   76 (119)
T ss_dssp             CCCCCSSCCCCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCS--C--TTCCEEEEEEEESSSCGGGCEEEEEETTCSEE
T ss_pred             CCCCCCCCEEEECCCcCCCCCCCcEEEEEccCCEEEEEecCCC--C--CccceEEEEEEECCCcccCcEEEEcCCCEeEE
Confidence            445433 456778888888889999999999999999999995  2  7899999999876432222 222  2346799


Q ss_pred             EEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCC
Q psy8774         148 VFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       148 ~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      .|.+|.|++.|.|+|+|.|..|.|++|..+.++|...+|.++
T Consensus        77 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp~~  118 (119)
T 2ee2_A           77 RLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASGPSS  118 (119)
T ss_dssp             EECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCCSCC
T ss_pred             EECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCCCCC
Confidence            999999999999999999999999999999999976665443

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.60  E-value=2.7e-15  Score=115.99  Aligned_cols=109  Identities=23%  Similarity=0.355  Sum_probs=91.0

Q ss_pred             CCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccce
Q psy8774         169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA  248 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (427)
                      |.|+.|..+.+.|..++|.+|.++++...+.+++.|+|++|..  +.+.+|+|+|+..+.   ..+              
T Consensus         1 G~g~~S~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~--~~i~~Y~v~~~~~~~---~~~--------------   61 (115)
T 1x5z_A            1 GSSGSSGDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRS--DTIANYELVYKDGEH---GEE--------------   61 (115)
T ss_dssp             CCCCCCCCCCCCCCSCCCCCCEEEEEECSSSSEEEEEEECCSC--CCCCEEEECBEESSS---CCC--------------
T ss_pred             CCCCCCCCEEEECCCCCCCCCccCEeeeCCCCEEEEEEcCCCC--CCccEEEEEEEeCCC---CCc--------------
Confidence            5678899999999888889999999999999999999999973  479999999987632   111              


Q ss_pred             eEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCC
Q psy8774         249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPE  311 (427)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~  311 (427)
                                     ........++++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.+.
T Consensus        62 ---------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~  109 (115)
T 1x5z_A           62 ---------------QRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQS  109 (115)
T ss_dssp             ---------------BCCEECSSSEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCC
T ss_pred             ---------------eEEecCCCcEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCC
Confidence                           112234568999999999999999999999999999999999998543

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.60  E-value=5.3e-15  Score=115.24  Aligned_cols=112  Identities=17%  Similarity=0.172  Sum_probs=91.8

Q ss_pred             CCCCCCCCeEEEcccccCCCCCceEEE-eeeCcEEEEEeeeCCCCCC-ceeEEEEEEEeccccccccccccccccccccc
Q psy8774         169 GPGPWSPKLSLMTARDMVRAPLGVKAL-ATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSN  246 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~~p~~l~~~-~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~  246 (427)
                      |.|++|+.+.+.|..+.|.+|.++.+. ..+.+++.|+|++|...+| .+.+|.|+++....  ...|            
T Consensus         1 G~s~~S~~~~~~t~~~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~--~~~~------------   66 (120)
T 2crm_A            1 GSSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSN--GNKW------------   66 (120)
T ss_dssp             CCCTTCSCCSCCSCCCCCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSS--SCCC------------
T ss_pred             CCCCCcCCEEEEeCCCCCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCC--CcCC------------
Confidence            567889999999988888999998887 7889999999999986543 79999999987622  1233            


Q ss_pred             ceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCC
Q psy8774         247 IARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPE  311 (427)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~  311 (427)
                                       ........+++++.+|.+++.|.|+|+|+|..|.|.+|..+.++|.+.
T Consensus        67 -----------------~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~  114 (120)
T 2crm_A           67 -----------------EMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAV  114 (120)
T ss_dssp             -----------------EEEECSSCSEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred             -----------------EEEEeccccEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence                             333345577899999999999999999999999999999888888543

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.60  E-value=1e-14  Score=113.90  Aligned_cols=112  Identities=24%  Similarity=0.384  Sum_probs=91.3

Q ss_pred             ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc--eEEE----eeeeeEEEEcc
Q psy8774          78 VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN--VIHR----NTTQTKAVFSN  151 (427)
Q Consensus        78 ~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~--~~~~----~~~~~~~~i~~  151 (427)
                      ...+.|.+.+|+.+|.++++...+.+++.|+|++|.....++.+.+|.|+|+..+....  ....    ....+++.|.+
T Consensus         5 ~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   84 (122)
T 1va9_A            5 SSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDN   84 (122)
T ss_dssp             CCSSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEES
T ss_pred             CEEEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCC
Confidence            45667888888888999999999999999999999643467899999999998743221  1111    12368999999


Q ss_pred             CCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCC
Q psy8774         152 LEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       152 L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      |.|++.|.|+|+|.|..|.|++|..+.++|..++|..|
T Consensus        85 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~p  122 (122)
T 1va9_A           85 LKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPSSG  122 (122)
T ss_dssp             CCSSCCEEEEEEEEETTEECCCCCCEECCCCSSCCCCC
T ss_pred             CCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCCCCCC
Confidence            99999999999999999999999999999987777654

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.60  E-value=8.6e-15  Score=113.29  Aligned_cols=109  Identities=24%  Similarity=0.372  Sum_probs=89.6

Q ss_pred             CCCCCCeEEEcc--cccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccce
Q psy8774         171 GPWSPKLSLMTA--RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA  248 (427)
Q Consensus       171 ~~~s~~~~~~t~--~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (427)
                      |+.|..+.++|.  .++|.+|.++++...+.+++.|+|++|...++.+.+|.|+|+..+..   .+              
T Consensus         1 G~~S~~~~~~T~~~~~~P~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~--------------   63 (116)
T 1x5g_A            1 GSSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTD---KE--------------   63 (116)
T ss_dssp             CCCCCCCCCSSCCCSSCCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCC---CC--------------
T ss_pred             CCCccCeEEEcCCCCCCCcCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCC---cc--------------
Confidence            456778888883  36789999999999999999999999987778999999999886321   11              


Q ss_pred             eEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCC
Q psy8774         249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED  312 (427)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~  312 (427)
                                      .......++++|.+|+|++.|.|+|+|+|..|.|.+|..+.++|.+..
T Consensus        64 ----------------~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~  111 (116)
T 1x5g_A           64 ----------------QDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS  111 (116)
T ss_dssp             ----------------CCEEECSSEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSS
T ss_pred             ----------------EEEecCCceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCC
Confidence                            112234678999999999999999999999999999999999986543

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=2.1e-14  Score=112.53  Aligned_cols=113  Identities=20%  Similarity=0.347  Sum_probs=90.1

Q ss_pred             CcCccc-ceEEeCCCCCCCCCCeeeEEE-eecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC-ceEE--EeeeeeE
Q psy8774          72 GYGQET-VRYYTTPEGPPTGPPANISHH-FQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN-NVIH--RNTTQTK  146 (427)
Q Consensus        72 g~~~~~-~~~~~t~~~~p~~~p~~~~~~-~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~-~~~~--~~~~~~~  146 (427)
                      |.|+.+ .+.+.|.+.+|..+|.++++. ..+.++|.|+|++|.....+|.|.+|.|+|+..+.+. ..+.  .....++
T Consensus         1 G~g~~S~~v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~   80 (124)
T 2dbj_A            1 GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSR   80 (124)
T ss_dssp             CCSCCCCCCCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEEEESTTSC
T ss_pred             CcCCCCCCEEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEEeCCCcce
Confidence            344433 456778888888899999988 5889999999999965567889999999997543221 1222  2345788


Q ss_pred             EEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccc
Q psy8774         147 AVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD  184 (427)
Q Consensus       147 ~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~  184 (427)
                      +.|.+|.|++.|.|+|+|.|..|.|++|..+.++|.++
T Consensus        81 ~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~  118 (124)
T 2dbj_A           81 ARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH  118 (124)
T ss_dssp             EEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred             EEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence            99999999999999999999999999999999999654

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.59  E-value=1.5e-14  Score=111.92  Aligned_cols=111  Identities=25%  Similarity=0.360  Sum_probs=89.6

Q ss_pred             CcCccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEc
Q psy8774          72 GYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS  150 (427)
Q Consensus        72 g~~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~  150 (427)
                      |.|+.+ .+.+.|.+++|..+|.++++.. +.++|.|+|++|.....+|.+.+|.|.|+...... ........+.+.+.
T Consensus         1 G~G~~S~~v~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~-~~~~~~~~~~~~~~   78 (117)
T 1wj3_A            1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNN-VQVLNTNKTSAELV   78 (117)
T ss_dssp             CCCCCCCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSS-CEEEEESSSEEEEE
T ss_pred             CcCCCCCCEEEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCC-CeEEeCCCcEEEEE
Confidence            345433 4567888888988999988877 88899999999976678899999999999874332 23333445677777


Q ss_pred             cCCCCcEEEEEEEEeeCCCCCCCCCCeEEEccccc
Q psy8774         151 NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDM  185 (427)
Q Consensus       151 ~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~  185 (427)
                       |.+++.|.|+|+|.|..|.|++|+.+.++|..+.
T Consensus        79 -L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v  112 (117)
T 1wj3_A           79 -LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSS  112 (117)
T ss_dssp             -CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCC
T ss_pred             -CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence             9999999999999999999999999999996654

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A

Probab=99.59  E-value=1.8e-14  Score=126.20  Aligned_cols=172  Identities=13%  Similarity=0.200  Sum_probs=115.1

Q ss_pred             cceEEEEEeeCCCCCCCc-ceEeEEEEEEecCc----cceeEe-----ecCcceEEEcCCCCCceEEEEEEEEeccCcCc
Q psy8774           6 PEVTIELVWSQPTQTYGE-ILGYRVKYGVREHT----LKENLV-----NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQ   75 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~~~-i~~Y~v~~~~~~~~----~~~~~~-----~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~   75 (427)
                      ...++.++|+++.+.+.. ...|.|.|+..+..    .+....     ....+.+...+|.+++.|.|+|.| | .+.+.
T Consensus        42 ~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~~Y~~~V~a-N-~~~s~  119 (236)
T 1axi_B           42 ERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPYCIKLTS-N-GGTVD  119 (236)
T ss_dssp             SSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEEEEEEEE-T-TEEEE
T ss_pred             CCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccceEEEEEEE-C-CccCC
Confidence            457899999986543333 24799998765432    133221     123345666789999999999999 7 33332


Q ss_pred             ccceEEeCCCCCCCCCCeeeE--EEeecC----CEEEEEeeCCCCC-CCCc-ceeEEEEEEEEccCCCceEEEee-eeeE
Q psy8774          76 ETVRYYTTPEGPPTGPPANIS--HHFQTP----DVVCITWDPPLRT-HRNG-QIVLYNVKFHKKIDANNVIHRNT-TQTK  146 (427)
Q Consensus        76 ~~~~~~~t~~~~p~~~p~~~~--~~~~~~----~~v~v~W~~p~~~-~~~~-~i~~Y~v~~~~~~~~~~~~~~~~-~~~~  146 (427)
                        ...+.....+.+.||.++.  +...+.    ..+.|+|++|... ..+| .+..|+|+|+.... ..+..... ..++
T Consensus       120 --~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~-~~w~~~~~~~~~~  196 (236)
T 1axi_B          120 --EKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNE-TKWKMMDPILTTS  196 (236)
T ss_dssp             --EEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTC-SSCEECCCBSSSE
T ss_pred             --CeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCC-CceEEEeccCCCE
Confidence              2334334445667899995  334332    3599999999632 2245 57899999998742 33444333 4689


Q ss_pred             EEEccCCCCcEEEEEEEEeeCCC--CCCCCCCeEEEcc
Q psy8774         147 AVFSNLEEGIEYSAEVQAITKAG--PGPWSPKLSLMTA  182 (427)
Q Consensus       147 ~~i~~L~p~t~Y~~~V~a~~~~g--~~~~s~~~~~~t~  182 (427)
                      +.|.+|.|++.|.|+|+|....|  .|.+|..+.+.++
T Consensus       197 ~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p  234 (236)
T 1axi_B          197 VPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP  234 (236)
T ss_dssp             EEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred             EEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence            99999999999999999999888  7889999888764

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.59  E-value=8.4e-15  Score=114.99  Aligned_cols=111  Identities=19%  Similarity=0.313  Sum_probs=91.2

Q ss_pred             ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc---------eEEEeeeeeEEE
Q psy8774          78 VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN---------VIHRNTTQTKAV  148 (427)
Q Consensus        78 ~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~---------~~~~~~~~~~~~  148 (427)
                      .+.+.|.+++|+.+|.++++...+.+++.|+|++|.....+|.+.+|.|+|+.......         ........+++.
T Consensus         4 ~v~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
T 1uen_A            4 GSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGM   83 (125)
T ss_dssp             CCCCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEE
T ss_pred             cEEEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccEEE
Confidence            35677888889889999999999999999999998544467789999999987743322         122235578999


Q ss_pred             EccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCC
Q psy8774         149 FSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRA  188 (427)
Q Consensus       149 i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~  188 (427)
                      |.+|.|++.|.|+|+|.|..|.|++|..+.++|..+.|..
T Consensus        84 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~  123 (125)
T 1uen_A           84 LPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPS  123 (125)
T ss_dssp             EESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSSC
T ss_pred             eCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCCCCC
Confidence            9999999999999999999999999999999997776654

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=99.58  E-value=1.2e-13  Score=119.35  Aligned_cols=181  Identities=23%  Similarity=0.233  Sum_probs=130.1

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccCC--CCcEEEEEEEE
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNLE--EGIEYSAEVQA  164 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L~--p~t~Y~~~V~a  164 (427)
                      +|+++++.+.+-.. .|+|+++.  ..++....|.|+|..-+ ...|...    ....+.|.|+++.  +...|.+||+|
T Consensus        11 ~P~nv~~~s~n~~~-iL~W~p~~--~~~~~~~~Y~Vqy~~~~-~~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~A   86 (221)
T 4doh_R           11 KPANITFLSINMKN-VLQWTPPE--GLQGVKVTYTVQYFIYG-QKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVRA   86 (221)
T ss_dssp             CCEEEEEEEETTEE-EEEEECCC--CSSCCCCEEEEEEEETT-SCCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEEE
T ss_pred             CCceeEEEEECCcE-EEEEcCCC--CCCCCCeEEEEEEEECC-CCCceecccccCCCCCEEeCCCccccCCCCEEEEEEE
Confidence            58999999877655 59999984  33356779999999752 2334332    2557899999874  56789999999


Q ss_pred             eeCCCCCCCCCCeEEEcc-cccCCCCCceEEEeeeCcEEEEEeeeCCCC----CCc---------eeEEEEEEEeccccc
Q psy8774         165 ITKAGPGPWSPKLSLMTA-RDMVRAPLGVKALATSDQSVEVWWKPVPAG----RGK---------ILGYQIFYTMTAVED  230 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~~t~-~~~p~~p~~l~~~~~~~~si~v~W~~p~~~----~g~---------i~~Y~I~~~~~~~~~  230 (427)
                      ..+.+.+.++....|... .....||. +.+. ...++|.|.|.+|...    +|.         ...|+|.|+..+...
T Consensus        87 ~~g~~~S~w~~~~~F~p~~~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~  164 (221)
T 4doh_R           87 IWGTKCSKWAESGRFYPFLETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNR  164 (221)
T ss_dssp             ESSSCBCCCEECCCBCHHHHCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTE
T ss_pred             EcCCcccCCEecCceechhhCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCc
Confidence            988777777665555542 23345554 8877 4678999999988742    221         358999999873221


Q ss_pred             ccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEec--cCCCCCccceEEee
Q psy8774         231 LDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTV--NGLGRLSGKVTVKV  308 (427)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~--~G~g~~s~~~~~~t  308 (427)
                        ..                             ..  ......+.|.+|+|++.|.|+|+|...  .|.|.+|..+.++|
T Consensus       165 --~~-----------------------------~~--~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T  211 (221)
T 4doh_R          165 --TW-----------------------------SQ--CVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCART  211 (221)
T ss_dssp             --EE-----------------------------EE--EECSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEEC
T ss_pred             --EE-----------------------------EE--eecCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEec
Confidence              11                             10  112457889999999999999999975  68999999999988


Q ss_pred             cC
Q psy8774         309 KP  310 (427)
Q Consensus       309 ~~  310 (427)
                      ..
T Consensus       212 ~~  213 (221)
T 4doh_R          212 LK  213 (221)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.58  E-value=3e-14  Score=110.58  Aligned_cols=115  Identities=13%  Similarity=0.185  Sum_probs=89.7

Q ss_pred             CcCccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE-EEeeeeeEEEE
Q psy8774          72 GYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI-HRNTTQTKAVF  149 (427)
Q Consensus        72 g~~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~i  149 (427)
                      |.|..+ ...+.|....| .+|.++++...+.+++.|+|.++.  +.++.+.+|.|+|+.......+. ......+.+.+
T Consensus         1 G~s~~S~~~~~~t~~~~P-~~P~~~~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v   77 (118)
T 1x3d_A            1 GSSGSSGAEIFTTLSCEP-DIPNPPRIANRTKNSLTLQWKAPS--DNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKI   77 (118)
T ss_dssp             CCCCCCCCCCCCCCCSCC-CCCCCCEEEEEETTEEEEECCCCC--CCSSCEEEEEEEECTTTSSSCCEEEEEESCSEEEE
T ss_pred             CCCCCCcCEEEEcCCCCC-cCCCCcEEeccCCCEEEEEECCCC--CCCCcceEEEEEEecCCCCCCeEEeeccCCcEEEe
Confidence            344444 33455555545 578899999999999999999994  55678999999998764323333 33345789999


Q ss_pred             ccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCC
Q psy8774         150 SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       150 ~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      .+|.|++.|.|+|+|.|..|.|.+|..+.+.|...+|..|
T Consensus        78 ~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P~~P  117 (118)
T 1x3d_A           78 TKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSGPSS  117 (118)
T ss_dssp             ESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCCCCCC
T ss_pred             CCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCCCccC
Confidence            9999999999999999999999999999999987777665

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.57  E-value=6.5e-15  Score=113.00  Aligned_cols=106  Identities=25%  Similarity=0.302  Sum_probs=86.7

Q ss_pred             EEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccc
Q psy8774         178 SLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAV  257 (427)
Q Consensus       178 ~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (427)
                      .++|..++|.+|.++++...+.+++.|+|++|...++.+.+|+|+|+..+... ..                        
T Consensus         3 ~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~-~~------------------------   57 (111)
T 1x5l_A            3 SGSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEM-QS------------------------   57 (111)
T ss_dssp             CCCCSCCCCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCC-SS------------------------
T ss_pred             eEEcCCCCCCCCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCc-ee------------------------
Confidence            45677788899999999899999999999999877889999999998863111 11                        


Q ss_pred             cccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         258 EDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                            ........++++|.+|.|++.|.|+|+|+|..|.|++|..+.++|.+...|
T Consensus        58 ------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p  108 (111)
T 1x5l_A           58 ------YSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP  108 (111)
T ss_dssp             ------CEEEEESSSEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred             ------EEEecCCCCEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence                  112234577899999999999999999999999999999999999665544

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.57  E-value=2.2e-14  Score=110.56  Aligned_cols=103  Identities=24%  Similarity=0.405  Sum_probs=82.9

Q ss_pred             ccCCCCCceEEEee--eCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccc
Q psy8774         184 DMVRAPLGVKALAT--SDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       184 ~~p~~p~~l~~~~~--~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      .||.+|.++++...  +.+++.|+|++|...+|.+.+|.|+|+.........|.                          
T Consensus         7 ~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~--------------------------   60 (114)
T 2ede_A            7 GPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWI--------------------------   60 (114)
T ss_dssp             CCCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSE--------------------------
T ss_pred             CCCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceE--------------------------
Confidence            45589999999988  77999999999987788999999999875322222220                          


Q ss_pred             cccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       262 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                        ........++++|.+|.|++.|.|+|+|+|..|.|++|..+.++|.+..+|
T Consensus        61 --~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp  111 (114)
T 2ede_A           61 --METISGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP  111 (114)
T ss_dssp             --EEEEETTCCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred             --EEEECCCceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence              122345678899999999999999999999999999999999999665554

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A

Probab=99.57  E-value=6.5e-14  Score=122.04  Aligned_cols=181  Identities=14%  Similarity=0.167  Sum_probs=126.2

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--E------eeeeeEEEE--ccCCCCcEEEE
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--R------NTTQTKAVF--SNLEEGIEYSA  160 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~------~~~~~~~~i--~~L~p~t~Y~~  160 (427)
                      +|.++.+...+...+.++|+++.  +.++...+|.|.|+..+.. ...+  .      ......+.+  .++..++.|.|
T Consensus        23 ~P~nl~C~~~~~~~l~C~W~~~~--~~~~~~~~y~l~y~~~~~~-~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~   99 (227)
T 1eer_B           23 GPEELLCFTERLEDLVCFWEEAA--SAGVGPGQYSFSYQLEDEP-WKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLEL   99 (227)
T ss_dssp             STTSCEEEBSSSSCCEEEEEESC--CSSCCTTSEEEEEEETTSC-CEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEE
T ss_pred             CCcCCeEECCCCCEEEEEecCCC--CCCCCCccEEEEEEcCCCC-ceeccceeccCCCCCceEEEEeCCCcceeeEEEEE
Confidence            58899999988999999999984  3333567899999876221 1111  1      012344554  46788999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEccc-ccCCCCCceEEEeee-CcEEEEEeeeCCCC-CCceeEEEEEEEecccccccccccc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMTAR-DMVRAPLGVKALATS-DQSVEVWWKPVPAG-RGKILGYQIFYTMTAVEDLDEWSQK  237 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t~~-~~p~~p~~l~~~~~~-~~si~v~W~~p~~~-~g~i~~Y~I~~~~~~~~~~~~~~~~  237 (427)
                      +|.|.+.  .+  .....+.... ..|.+|.++++...+ .+.+.|+|++|... ...+..|+|.|+..+.   ..|.. 
T Consensus       100 ~V~a~~~--~~--~~~~~~~~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~---~~w~~-  171 (227)
T 1eer_B          100 RVTAASG--AP--RYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQG---AGSVQ-  171 (227)
T ss_dssp             EEEETTS--CE--EEEEEECGGGSEECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSS---SCCCC-
T ss_pred             EEEecCC--Cc--cEEEEEEeeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCC---CCcEE-
Confidence            9999643  22  1122233322 467999999998874 78999999998743 2347899999987522   22200 


Q ss_pred             cccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEecc----C-CCCCccceEEee
Q psy8774         238 SIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN----G-LGRLSGKVTVKV  308 (427)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~----G-~g~~s~~~~~~t  308 (427)
                                                ........+++.|.+|.|++.|.|+|+|....    | .|.+|..+.+.|
T Consensus       172 --------------------------~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t  221 (227)
T 1eer_B          172 --------------------------RVEILEGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT  221 (227)
T ss_dssp             --------------------------EEEECTTCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred             --------------------------EEEEecCceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence                                      01223456789999999999999999999752    4 588999899888

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}

Probab=99.57  E-value=1.6e-13  Score=117.53  Aligned_cols=177  Identities=18%  Similarity=0.171  Sum_probs=113.6

Q ss_pred             CCeeeEEEee-cCCEEEEEeeCCCCCCCCccee-EEEEEEEEccCC-------C----ceEE-Ee-eeeeEEEEccCCCC
Q psy8774          91 PPANISHHFQ-TPDVVCITWDPPLRTHRNGQIV-LYNVKFHKKIDA-------N----NVIH-RN-TTQTKAVFSNLEEG  155 (427)
Q Consensus        91 ~p~~~~~~~~-~~~~v~v~W~~p~~~~~~~~i~-~Y~v~~~~~~~~-------~----~~~~-~~-~~~~~~~i~~L~p~  155 (427)
                      .|.++.+... ....+.++|++...   ..... .|.+.|......       .    ...+ .. .....+.+..|...
T Consensus         3 ~~~nlsC~~~~~~~~~~C~W~~g~~---~~l~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~   79 (206)
T 3v6o_A            3 VNINISCETDGYLTKMTCRWSTSTI---QSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLL   79 (206)
T ss_dssp             -CCCCEEEECTTSSCEEEEECCCC-----------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTT
T ss_pred             CCEEEEEEECCCCcEEEEEecCCCc---CCcccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhc
Confidence            4678888877 56899999998742   12233 688888764210       0    0111 11 22457889999999


Q ss_pred             cEEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEee-eCcEEEEEeeeCCCCCCceeEEEEEEEecccccccc
Q psy8774         156 IEYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALAT-SDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDE  233 (427)
Q Consensus       156 t~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~-~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~  233 (427)
                      +.|.|+|.|.|..|.+ .|..+.+.. ....|.||.++.+... ..+++.|+|++|.... ....|+|.|+..+.  ...
T Consensus        80 ~~Y~~~V~a~N~~G~~-~s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~-~~l~yev~y~~~~~--~~~  155 (206)
T 3v6o_A           80 SGYTMWIRINHSLGSL-DSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPE-NNLQFQIRYGLSGK--EVQ  155 (206)
T ss_dssp             SCEEEEEEEC---CCE-ECCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC---------CEEEEEEEEESSS--SCC
T ss_pred             ccEEEEEEEEcCCccc-cCCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCC-CcEEEEEEEEECCC--CCc
Confidence            9999999999998875 366777755 4456789999998765 5789999999987433 45899999998631  123


Q ss_pred             cccccccccccccceeEEeeeccccccccccccc--cCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc
Q psy8774         234 WSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKS--VPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK  303 (427)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~  303 (427)
                      |                             ....  ......+.|.+|+|++.|.|+|||.+..|.|.+|+.
T Consensus       156 w-----------------------------~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSeW  198 (206)
T 3v6o_A          156 W-----------------------------KMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNW  198 (206)
T ss_dssp             C-----------------------------EEEEECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCCC
T ss_pred             e-----------------------------EEEecccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCCC
Confidence            3                             2111  122346889999999999999999998777766654

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}

Probab=99.57  E-value=1.3e-14  Score=124.31  Aligned_cols=179  Identities=15%  Similarity=0.198  Sum_probs=107.8

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE----EEeeeeeEEEEcc--CCCCcEEEEEEEE
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI----HRNTTQTKAVFSN--LEEGIEYSAEVQA  164 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~----~~~~~~~~~~i~~--L~p~t~Y~~~V~a  164 (427)
                      +|.++++.+.+-..+ |+|+++.  ...+....|.|+|+..+ ...|.    +.....+.|.|++  +.+...|.+||+|
T Consensus        10 ~P~nv~~~s~n~~~i-L~W~p~~--~~~~~~~~Y~Vqy~~~~-~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~A   85 (211)
T 3g9v_A           10 KPQRVQFQSRNFHNI-LQWQPGR--ALTGNSSVYFVQYKIYG-QRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRA   85 (211)
T ss_dssp             CCEEEEEEEETTEEE-EEEECCC--C---CCCEEEEEEEETT-CSSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEEE
T ss_pred             CCceeEEEEEcCceE-EEECCCC--CCCCCCeEEEEEEEECC-CCceEECccCCCCCCCEECCCCcccccCccEEEEEEE
Confidence            589999988777665 9999984  33334678999999873 23333    2335578888875  4789999999999


Q ss_pred             eeCCCCCCCCCCeEEEcc-cccCCCCCceEEEeeeCcEEEEEeeeCCC----CCCc--------eeEEEEEEEecccccc
Q psy8774         165 ITKAGPGPWSPKLSLMTA-RDMVRAPLGVKALATSDQSVEVWWKPVPA----GRGK--------ILGYQIFYTMTAVEDL  231 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~~t~-~~~p~~p~~l~~~~~~~~si~v~W~~p~~----~~g~--------i~~Y~I~~~~~~~~~~  231 (427)
                      .++.+.|.++....|... ...+.+| .+.+...+ ++|.|.|.+|..    .+|.        ...|+|.|+..+... 
T Consensus        86 ~~~~~~S~ws~~~~f~~~~~t~i~PP-~v~v~~~~-~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~~-  162 (211)
T 3g9v_A           86 ASAGSYSEWSMTPRFTPWWETKIDPP-VMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEK-  162 (211)
T ss_dssp             EETTEECCCEECCCBCHHHHCBCCCC-EEECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC-------
T ss_pred             ECCCCcCCCEecCcccccccCccCCC-EEEEEEcC-CEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCcc-
Confidence            998888888766666552 3344555 48877654 599999999985    3442        367999998763221 


Q ss_pred             cccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEec--cCCCCCccceEEe
Q psy8774         232 DEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTV--NGLGRLSGKVTVK  307 (427)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~--~G~g~~s~~~~~~  307 (427)
                       .                              ..........+.|.+|.|++.|.|+|+|...  ...|.+|.....+
T Consensus       163 -~------------------------------~~~~~~~~~~~~i~~L~p~t~Ycv~V~a~~~~~~~~s~~S~~~C~~  209 (211)
T 3g9v_A          163 -E------------------------------QKVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSEERCVE  209 (211)
T ss_dssp             -C------------------------------EEEEEESSCCCC----------CEEEEEEETTTTEECCCCCC----
T ss_pred             -E------------------------------EEEEecCCcEEEEecCCCCCeEEEEEEEEeCCCCCcCCCCCCEeEC
Confidence             1                              1112244568889999999999999999964  2356677655443

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.57  E-value=4.9e-14  Score=108.63  Aligned_cols=101  Identities=13%  Similarity=0.139  Sum_probs=83.9

Q ss_pred             CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ce--EEEeeeeeEEEEccCCCCcEEEE
Q psy8774          85 EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NV--IHRNTTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        85 ~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~--~~~~~~~~~~~i~~L~p~t~Y~~  160 (427)
                      +.+|+.+|.++++...+.++|.|+|++|.....++.+.+|.|+|+......  .+  .......+++.|.+|.|++.|.|
T Consensus         5 ~~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~   84 (114)
T 1x4y_A            5 SSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDI   84 (114)
T ss_dssp             CCSCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEE
T ss_pred             ccCCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEE
Confidence            456888999999999999999999999965567889999999998764331  12  23334468899999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEccccc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMTARDM  185 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t~~~~  185 (427)
                      +|+|+|..|.|++|..+.++|...+
T Consensus        85 ~V~A~n~~G~g~~S~~v~~~T~~~~  109 (114)
T 1x4y_A           85 KMQCFNEGGESEFSNVMICETKARS  109 (114)
T ss_dssp             EEEEECTTCCCCCCCCEEEECCCCC
T ss_pred             EEEEEcCCccCCCcCCEEEEeCCCC
Confidence            9999999999999999999996654

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.57  E-value=7.6e-15  Score=114.50  Aligned_cols=116  Identities=22%  Similarity=0.375  Sum_probs=93.6

Q ss_pred             CcCccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEE-EeeeeeEE
Q psy8774          72 GYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIH-RNTTQTKA  147 (427)
Q Consensus        72 g~~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~-~~~~~~~~  147 (427)
                      |.|+.+ ...+.|.+..|+.+|.++++...+.+++.|+|++|  ...++.+.+|.|+|+......  .+.. .....+++
T Consensus         1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~   78 (121)
T 2dlh_A            1 GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEP--EEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQIT   78 (121)
T ss_dssp             CCCCCCSSSCSCCCCCCCCSCCEEEEECCCSSSBCCEEEECC--SCCCSCEEEEEEECCSCTTSCTTTSCCCCCSSCSEE
T ss_pred             CCCCCCCCEEEECCCcCCCCCCcccEEEecCCCEEEEEECCC--CCCCCcEeEEEEEEEeCCCCCccccEEEecCCceEE
Confidence            445544 45677778888888999999988999999999998  466788999999998663221  1111 22457889


Q ss_pred             EEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCC
Q psy8774         148 VFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       148 ~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      .|.+|.|++.|.|+|+|.|..|.|++|..+.++|..+.|.+|
T Consensus        79 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~P  120 (121)
T 2dlh_A           79 TIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGPSS  120 (121)
T ss_dssp             CCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCCSCCC
T ss_pred             EecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCCCCCC
Confidence            999999999999999999999999999999999988887776

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.56  E-value=1.8e-14  Score=112.52  Aligned_cols=115  Identities=27%  Similarity=0.341  Sum_probs=88.5

Q ss_pred             CCCCeEEEcccccCC-CCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEeccccccccccccccccccccccee
Q psy8774         173 WSPKLSLMTARDMVR-APLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIAR  249 (427)
Q Consensus       173 ~s~~~~~~t~~~~p~-~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (427)
                      +|..+.++|..+.|. +|.++++...+.+++.|+|++|..  .+|.+.+|+|+|+..+......+...            
T Consensus         2 sS~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~------------   69 (122)
T 1va9_A            2 SSGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV------------   69 (122)
T ss_dssp             CCCCCSSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC------------
T ss_pred             CCCCEEEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEE------------
Confidence            456677788777775 899999999999999999999986  57899999999998742221111000            


Q ss_pred             EEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         250 IFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                                    ........++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|.. .+|
T Consensus        70 --------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~-~~P  119 (122)
T 1va9_A           70 --------------EMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLE-SGP  119 (122)
T ss_dssp             --------------BCCCCSSEEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCS-SCC
T ss_pred             --------------EEecCCceeEEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCC-CCC
Confidence                          11123445789999999999999999999999999999999998843 344

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C

Probab=99.56  E-value=4.9e-14  Score=106.03  Aligned_cols=95  Identities=13%  Similarity=0.199  Sum_probs=76.1

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEE--EeeeeeEEEEccCCCCcEEEEEE
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIH--RNTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~--~~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      .|..+|.++.+...+++++.|+|++|.....+|.|.+|.|.|+..+...  .+..  .....+++.|.+|.|++.|.|+|
T Consensus         3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V   82 (102)
T 3n1f_C            3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKM   82 (102)
T ss_dssp             -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEE
T ss_pred             CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEE
Confidence            4778899999999999999999999965568899999999999874331  2322  22346789999999999999999


Q ss_pred             EEeeCCCCCCCCCCeEEEc
Q psy8774         163 QAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~~~~t  181 (427)
                      +|.|..|.|++|..+.++|
T Consensus        83 ~A~n~~G~G~~S~~~~~~T  101 (102)
T 3n1f_C           83 QCFNEGGESEFSNVMICET  101 (102)
T ss_dssp             EEEETTEECCCCCCEEEEC
T ss_pred             EEECCCcCCCCCCCEEeec
Confidence            9999999999999988876

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.56  E-value=3.3e-14  Score=110.95  Aligned_cols=113  Identities=16%  Similarity=0.147  Sum_probs=85.6

Q ss_pred             CCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCce----eEEEEEEEecccccccccccccccccccc
Q psy8774         171 GPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKI----LGYQIFYTMTAVEDLDEWSQKSIPLTESS  245 (427)
Q Consensus       171 ~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i----~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~  245 (427)
                      +..|.++.+.+ ...+|.+|.+|++...+.++|.|+|.++...++.+    .+|+|+|+...... ..+           
T Consensus         3 ~~~s~~~~~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~-~~~-----------   70 (123)
T 2edd_A            3 SGSSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSAS-AKY-----------   70 (123)
T ss_dssp             SCCSCCCCSCSSCCCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTT-CCC-----------
T ss_pred             CccCCCCcCCCccCCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCC-ccE-----------
Confidence            34555666655 35677999999999999999999999887555444    49999998763211 111           


Q ss_pred             cceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                                         .......++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+..+|
T Consensus        71 -------------------~~~~~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~~~P  120 (123)
T 2edd_A           71 -------------------KSEDTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASGP  120 (123)
T ss_dssp             -------------------CCEEESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCSSSC
T ss_pred             -------------------EEEeCCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCCCCC
Confidence                               11223477899999999999999999999999999999999998543144

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.56  E-value=3.1e-14  Score=109.73  Aligned_cols=103  Identities=17%  Similarity=0.262  Sum_probs=81.6

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      .|+.+|.++++...+.++|.|+|++|..  .++.+.+|.|+|+.........+.                          
T Consensus         7 ~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~--------------------------   60 (114)
T 1x4y_A            7 GPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYK--------------------------   60 (114)
T ss_dssp             SCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCC--------------------------
T ss_pred             CCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCccee--------------------------
Confidence            4568899999999999999999999963  678999999999876322111110                          


Q ss_pred             cccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       262 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                        ........++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|....+|
T Consensus        61 --~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~p  111 (114)
T 1x4y_A           61 --KDMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSGP  111 (114)
T ss_dssp             --CEEEETTCCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCCS
T ss_pred             --eEecCCcEeEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence              112334557899999999999999999999999999999999999665554

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.56  E-value=5.6e-14  Score=106.70  Aligned_cols=100  Identities=15%  Similarity=0.224  Sum_probs=82.0

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      .++.+|.++++...+.+++.|+|++|.  +.++.+.+|.|+|+.... ..........+++.|.+|.|++.|.|+|+|.|
T Consensus         6 ~~P~~P~~~~~~~~s~~sv~l~W~~p~--~~g~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n   82 (106)
T 1x4x_A            6 SGPDQCKPPQVTCRSATCAQVNWEVPL--SNGTDVTEYRLEWGGVEG-SMQICYCGPGLSYEIKGLSPATTYYCRVQALS   82 (106)
T ss_dssp             CSCCCCCCCCCEEEETTEEEEECCCCS--CSSSCCCEEEEEEESSTT-SCCEEEEESCSEEEEESCCSSCEEEEEEEEEC
T ss_pred             CCcCCCCCCEEEEcCCCEEEEEEcCCC--CCCCcceEEEEEEEcCCC-ceEEEEeCCcceEEEcCCCCCCEEEEEEEEEc
Confidence            355678899999999999999999984  333489999999987632 22233345578999999999999999999999


Q ss_pred             CCCCCCCCCCeEEEcccccCCCC
Q psy8774         167 KAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       167 ~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      ..|.|++|..+.++|...+|.+|
T Consensus        83 ~~G~g~~S~~v~~~T~~~~P~~~  105 (106)
T 1x4x_A           83 VVGAGPFSEVVACVTPPSSGPSS  105 (106)
T ss_dssp             SSCCCCBCCCEEEECCCCCSCCC
T ss_pred             CCcCCCCcCCEEEECCCCCcCCC
Confidence            99999999999999988777665

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.56  E-value=1.9e-14  Score=112.97  Aligned_cols=117  Identities=24%  Similarity=0.280  Sum_probs=88.2

Q ss_pred             CCCeEEEcccccC-CCCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEecccccccccccccccccccccceeE
Q psy8774         174 SPKLSLMTARDMV-RAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI  250 (427)
Q Consensus       174 s~~~~~~t~~~~p-~~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (427)
                      |+.+.++|.++.| .+|.++++...+.+++.|+|++|..  .+|.+.+|+|+|+.........+.....           
T Consensus         2 S~~v~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~-----------   70 (125)
T 1uen_A            2 SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEK-----------   70 (125)
T ss_dssp             CCCCCCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCE-----------
T ss_pred             CccEEEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccc-----------
Confidence            4566777877666 7899999999999999999999853  4688999999998864322211100000           


Q ss_pred             EeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCC
Q psy8774         251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDV  313 (427)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~  313 (427)
                                  .........++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+..|
T Consensus        71 ------------~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P  121 (125)
T 1uen_A           71 ------------KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSG  121 (125)
T ss_dssp             ------------EEEEEESSCSEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCS
T ss_pred             ------------eEEEecCCccEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCCC
Confidence                        011234567899999999999999999999999999999999999854433

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C

Probab=99.55  E-value=3.2e-14  Score=107.08  Aligned_cols=96  Identities=18%  Similarity=0.286  Sum_probs=75.7

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ..+|.++.+...+.+++.|+|++|..  .+|.|.+|.|.|+..+......+.                            
T Consensus         5 ~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~----------------------------   56 (102)
T 3n1f_C            5 ITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYK----------------------------   56 (102)
T ss_dssp             CSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCE----------------------------
T ss_pred             CCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceE----------------------------
Confidence            36899999999999999999999975  678999999999986432111220                            


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                      .....+..++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|+
T Consensus        57 ~~~v~~~~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T~  102 (102)
T 3n1f_C           57 RDVVEGSKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICETK  102 (102)
T ss_dssp             EEEEETTCSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECC
T ss_pred             EEEEcCCceEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeecC
Confidence            1123345668999999999999999999999999999999998873

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.55  E-value=3.1e-14  Score=108.21  Aligned_cols=100  Identities=25%  Similarity=0.334  Sum_probs=82.0

Q ss_pred             ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccc
Q psy8774         182 ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       182 ~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      ..+.|.+|.++++...+.+++.|+|++|...++.+.+|+|+|+....   ..+                           
T Consensus         4 ~~~~P~~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~---~~~---------------------------   53 (106)
T 2ed8_A            4 GSSGPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVST---GKE---------------------------   53 (106)
T ss_dssp             CCCCCCCCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTT---CCE---------------------------
T ss_pred             CCCCCcCCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCC---Cce---------------------------
Confidence            35678899999999999999999999998777899999999987632   122                           


Q ss_pred             cccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       262 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                        .. .....++++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|....||
T Consensus        54 --~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~  103 (106)
T 2ed8_A           54 --QN-IEVDGLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDSGP  103 (106)
T ss_dssp             --EE-EEECSSCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCCC
T ss_pred             --EE-EeCCccEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCCCC
Confidence              11 112367899999999999999999999999999999999998655444

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.54  E-value=1.3e-13  Score=106.20  Aligned_cols=101  Identities=22%  Similarity=0.369  Sum_probs=83.2

Q ss_pred             CCCCCCCCCCeeeEEEee--cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceE--EEeeeeeEEEEccCCCCc
Q psy8774          83 TPEGPPTGPPANISHHFQ--TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVI--HRNTTQTKAVFSNLEEGI  156 (427)
Q Consensus        83 t~~~~p~~~p~~~~~~~~--~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~--~~~~~~~~~~i~~L~p~t  156 (427)
                      |.+.+|+.+|.++++...  +.+++.|+|++|  ...+|.+.+|.|+|+......  .+.  ......+++.|.+|.|++
T Consensus         3 T~~~~P~~~P~~l~~~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t   80 (114)
T 2ede_A            3 SGSSGPTSAPKDLTVITREGKPRAVIVSWQPP--LEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDT   80 (114)
T ss_dssp             CCCCCCCSCCEEEEEEECSSCSSCEEEEEECC--SSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSC
T ss_pred             CCCCCCCCCCcceEEEEccCCCCEEEEEECCC--CCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCC
Confidence            566788889999999887  789999999999  466778999999998753221  222  233558899999999999


Q ss_pred             EEEEEEEEeeCCCCCCCCCCeEEEccccc
Q psy8774         157 EYSAEVQAITKAGPGPWSPKLSLMTARDM  185 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~  185 (427)
                      .|.|+|+|.|..|.|++|..+.++|...+
T Consensus        81 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~  109 (114)
T 2ede_A           81 MYYFRIQARNSKGVGPLSDPILFRTLKVS  109 (114)
T ss_dssp             EEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred             EEEEEEEEEeCCcCcCCcccEEEEecCCC
Confidence            99999999999999999999999985543

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.54  E-value=8.5e-14  Score=106.52  Aligned_cols=101  Identities=24%  Similarity=0.335  Sum_probs=81.8

Q ss_pred             CCCCCeeeEE-EeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          88 PTGPPANISH-HFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        88 p~~~p~~~~~-~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      ++.+|.++.+ ...+.+++.|+|++|. .+.++.+.+|.|+|+...............+.+.|.+|.|++.|.|+|+|.|
T Consensus         8 ~P~~P~~~~~~~~~~~~sv~l~W~~P~-~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n   86 (110)
T 2crz_A            8 PPGPCLPPRLQGRPKAKEIQLRWGPPL-VDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAAN   86 (110)
T ss_dssp             CCCCCCCCEECSCCCSSEEEEECCCCS-CCTTSCCCEEEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEEC
T ss_pred             CCCCCCCceeccccCCCEEEEEeCCCC-CCCCceeEEEEEEEEeCCCCceEEEEeCCcEEEEECCcCCCCEEEEEEEEEc
Confidence            4467888888 4678889999998874 3445689999999987633333333345688999999999999999999999


Q ss_pred             CCCCCCCCCCeEEEcccccCCCC
Q psy8774         167 KAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       167 ~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      ..|.|.+|..+.+.|..++|.+|
T Consensus        87 ~~G~g~~S~~~~~~T~~~~P~~P  109 (110)
T 2crz_A           87 KMGFGPFSEKCDITTAPGSGPSS  109 (110)
T ss_dssp             SSCBCCCCCCEEEECCCSCCCCC
T ss_pred             CCccCCCCCccccccCCCCCCCC
Confidence            99999999999999988887766

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.54  E-value=3.5e-14  Score=107.83  Aligned_cols=97  Identities=18%  Similarity=0.125  Sum_probs=79.3

Q ss_pred             cccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         181 TARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       181 t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      +...+|.+|.++++...+.+++.|+|++|...++.+.+|.|+|+....    .+                          
T Consensus         3 t~~~~P~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~----~~--------------------------   52 (106)
T 1x4x_A            3 SGSSGPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEG----SM--------------------------   52 (106)
T ss_dssp             SSCCSCCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTT----SC--------------------------
T ss_pred             CCCCCcCCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCC----ce--------------------------
Confidence            456788999999999999999999999998633489999999986521    11                          


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                         ........++++|.+|.|++.|.|+|+|.|..|.|++|..+.++|.+
T Consensus        53 ---~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~   99 (106)
T 1x4x_A           53 ---QICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPP   99 (106)
T ss_dssp             ---CEEEEESCSEEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCC
T ss_pred             ---EEEEeCCcceEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCC
Confidence               11223456789999999999999999999999999999999999843

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}

Probab=99.54  E-value=1.1e-13  Score=105.47  Aligned_cols=100  Identities=24%  Similarity=0.416  Sum_probs=83.1

Q ss_pred             CCCCCCCeeeEEEe--ecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEE
Q psy8774          86 GPPTGPPANISHHF--QTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQ  163 (427)
Q Consensus        86 ~~p~~~p~~~~~~~--~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~  163 (427)
                      ..| .+|.++++..  .+.+++.|+|++|.  +.++.+.+|.|+|+.... ..+.......+.+.|.+|.|++.|.|+|+
T Consensus         6 ~~P-~~P~~l~~~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~   81 (108)
T 2dm4_A            6 SGP-DAPRNLQLSLPREAEGVIVGHWAPPI--HTHGLIREYIVEYSRSGS-KMWASQRAASNFTEIKNLLVNTLYTVRVA   81 (108)
T ss_dssp             CCT-TSCEEEEEECCTTCSSCEEEEEECCS--CCSSCEEEEEEEEEETTC-SCCEEEEESSSEEEECSCCSSCEEEEEEE
T ss_pred             CCC-cCCcCeEEEEeccCCCEEEEEEcCCC--CCCCcEEEEEEEEEECCC-CCeEEecCCccEEEeCCCCCCCEEEEEEE
Confidence            344 4799998766  57889999999994  667889999999998743 33444455678999999999999999999


Q ss_pred             EeeCCCCCCCCCCeEEEcccccCCCC
Q psy8774         164 AITKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       164 a~~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      |.|..|.|++|..+.++|..+.|.+|
T Consensus        82 A~n~~G~g~~S~~~~~~T~~~~P~~p  107 (108)
T 2dm4_A           82 AVTSRGIGNWSDSKSITTIKGSGPSS  107 (108)
T ss_dssp             EEESSCEEEECCCEEEECCSCSSCCC
T ss_pred             EECCCceeCCCCCEEEECCCCCCCCC
Confidence            99999999999999999977777665

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.53  E-value=5.2e-14  Score=108.64  Aligned_cols=113  Identities=18%  Similarity=0.253  Sum_probs=88.9

Q ss_pred             CcCccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEc
Q psy8774          72 GYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS  150 (427)
Q Consensus        72 g~~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~  150 (427)
                      |.|+.+ ...+.|...+| .+|.++++...+.+++.|+|+++.  .  +.+.+|.|+|+..+............+.+.|.
T Consensus         1 G~g~~S~~~~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~--~--~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~   75 (115)
T 1x5z_A            1 GSSGSSGDIQVITQTGVP-GQPLNFKAEPESETSILLSWTPPR--S--DTIANYELVYKDGEHGEEQRITIEPGTSYRLQ   75 (115)
T ss_dssp             CCCCCCCCCCCCCCSCCC-CCCEEEEEECSSSSEEEEEEECCS--C--CCCCEEEECBEESSSCCCBCCEECSSSEEEEE
T ss_pred             CCCCCCCCEEEECCCCCC-CCCccCEeeeCCCCEEEEEEcCCC--C--CCccEEEEEEEeCCCCCceEEecCCCcEEEEC
Confidence            345443 44566666666 579999999999999999999984  2  37889999999874433322233457899999


Q ss_pred             cCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCC
Q psy8774         151 NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       151 ~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      +|.|++.|.|+|+|.|..|.|.+|..+.++|..++|.+|
T Consensus        76 ~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~p  114 (115)
T 1x5z_A           76 GLKPNSLYYFRLAARSPQGLGASTAEISARTMQSSGPSS  114 (115)
T ss_dssp             CCCTTCEEEECEEEECSSCEEEECCCEEEECCCCCCCCC
T ss_pred             CCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCCCCCC
Confidence            999999999999999999999999999999977776554

>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C

Probab=99.53  E-value=8.6e-12  Score=113.43  Aligned_cols=269  Identities=13%  Similarity=0.118  Sum_probs=162.2

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      ..||.++.+...+...+.|+|++++.......-..|.|.++..  +...+.... ........|..+  |.++|++....
T Consensus        12 ~~pP~nl~i~~~~~~~~~l~W~~~p~~~~~~~~l~Y~v~~~~~--~~~~w~~~~-t~~~~~~~L~~~--~~~rVrt~~~~   86 (317)
T 3qt2_A           12 LLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAP--KEDDYETRI-TESKAVTILHMG--FSASVRTILQN   86 (317)
T ss_dssp             CCCCEEEEEEEEETTEEEEEEECCTTSSCSSSCCEEEEEEEES--SCEEEEESS-SEEEEECCCTTC--EEEEEEEEEEC
T ss_pred             cCCCcceEEEECCCceEEEEECCCCccccCcCcEEEEEEECCC--CCcccEeec-cccccccccCCC--eEEEEEEEECC
Confidence            3579999999888899999999965333322345899998877  333333222 233446678766  88888887765


Q ss_pred             CCC-CCCCCeEEEc---ccccCCCCCceEEEeee-----------CcEEEEEeeeCCCCCCceeEEEEEEEecccccccc
Q psy8774         169 GPG-PWSPKLSLMT---ARDMVRAPLGVKALATS-----------DQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDE  233 (427)
Q Consensus       169 g~~-~~s~~~~~~t---~~~~p~~p~~l~~~~~~-----------~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~  233 (427)
                      |.+ .+|..+....   ...+|..|.+|.+...+           ...+.++|++-.. ...-..|.++|+..+.     
T Consensus        87 ~~s~~~S~w~~~~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~~-~~~~t~Y~L~y~~~~~-----  160 (317)
T 3qt2_A           87 DHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGTD-APEDTQYFLYYRYGSW-----  160 (317)
T ss_dssp             SSCEEECCCEEEEECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCTT-CCTTCEEEEEEEETTE-----
T ss_pred             CCCccccccccccccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeCCCC-CCCCeeEEEEEEeCCC-----
Confidence            543 2455555433   34456789999998876           4789999998652 2234679999987631     


Q ss_pred             cccccccccccccceeEEeeeccccccccccccccC-CCCceeccCC--C--CCCeEEEEEEEEeccCCCCCccceEEe-
Q psy8774         234 WSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVP-LTESAELTSL--E--KFTEYAVAVAARTVNGLGRLSGKVTVK-  307 (427)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~L--~--p~t~Y~~~V~a~~~~G~g~~s~~~~~~-  307 (427)
                      ...|...                       . .... ......|...  .  ....|.|.|.+.+..+.-. +....+. 
T Consensus       161 ~~eC~~y-----------------------~-~~~~~~~~~C~f~~~~~~~~~~~~~~i~V~gss~~~~i~-s~~~~~~l  215 (317)
T 3qt2_A          161 TEECQEY-----------------------S-MDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIR-PFDQLFAL  215 (317)
T ss_dssp             EEECCCE-----------------------E-ECTTSCEEEEEESSCSCCTTCCSEEEEEEEEECTTSCBC-CEEEEEEH
T ss_pred             CeeCCcc-----------------------c-cCCCcceeEEEeCCccccccCcEEEEEEEEcCCCCcccc-ccceEEEH
Confidence            1111100                       0 0111 1124444432  2  3467888888665433211 2112233 


Q ss_pred             --ecCCCCCcceEEeecCCCeEEEEecCCCcC---CCceEEEEEeheeecc--eeeeeeEEEEeecccccccceEEEEEe
Q psy8774         308 --VKPEDVPLSLRAHDVSTHSMTLSWSPPIKL---NPVKYKEVSEKIQERR--LQKYGQYRYFETRDESYIGKRVERMEV  380 (427)
Q Consensus       308 --t~~~~~P~~l~~~~~~~~~v~l~W~~P~~~---~g~~Y~i~~~~~~~~~--l~~~t~y~~~~~~~~~~~~~~~~~v~a  380 (427)
                        -..+.||.+|++.. ..+.+.|+|++|...   ..+.|+|.+.......  ........| .. .+.+...|.|+||+
T Consensus       216 ~~iVkp~PP~nL~v~~-~~~~l~v~W~~P~~~~~~~~L~Yevryr~~~~~~~~~~~~~~~~~-~l-~l~p~~~Y~vqVR~  292 (317)
T 3qt2_A          216 HAIDQINPPLNVTAEI-EGTRMSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQIEKLMTNAF-IS-IIDDLSKYDVQVRA  292 (317)
T ss_dssp             HHHBCCCCCEEEEEEE-ETTEEEEEEECCSSSSCGGGEEEEEEEEETTTCCEEEEEESSSEE-EE-ECCTTCCEEEEEEE
T ss_pred             HHcCcCCCCceeEEEE-eCCcEEEEECCCCcccccCceEEEEEEEeCCCCcceEEEEeeeEE-Ee-ecCCCCEEEEEEEE
Confidence              13567888999884 458999999998532   2258999886422111  111111122 22 47889999999999


Q ss_pred             ecccCC--CCcchhhhHH
Q psy8774         381 RGRKGR--GRPKKRWMDC  396 (427)
Q Consensus       381 ~~~~g~--g~p~~~~~~~  396 (427)
                      ....+.  ....++|++.
T Consensus       293 k~~~~~~~~g~WSeWS~~  310 (317)
T 3qt2_A          293 AVSSMCREAGLWSEWSQP  310 (317)
T ss_dssp             EECTTTSSCCCCCCCCCC
T ss_pred             eecCCCCCCCCcCCCCCC
Confidence            965542  2356777764

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=2.2e-14  Score=111.37  Aligned_cols=108  Identities=19%  Similarity=0.214  Sum_probs=84.4

Q ss_pred             CCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccccccccccccccccccee
Q psy8774         170 PGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIAR  249 (427)
Q Consensus       170 ~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (427)
                      .+..+....+.|..+.|.+|.++++...+.+++.|+|++|... |.+.+|+|+|+..+.   ..+..             
T Consensus         2 ss~~~~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~-g~i~~Y~v~~~~~~~---~~~~~-------------   64 (118)
T 2yrz_A            2 SSGSSGSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCE-RPLQGYSVEYQLLNG---GELHR-------------   64 (118)
T ss_dssp             CCCCCSCCTTSSSCSCCCCCCCCEECCCBTTEEEEECCCCCCS-SCEEEEEEEEEBSSS---CCEEE-------------
T ss_pred             CCCCCCcceeecCCCCCCCCCceEEEeCCCCEEEEEeCCCCCC-CCccEEEEEEEECCC---CceEE-------------
Confidence            3445556677788888999999999999999999999999854 789999999987632   12200             


Q ss_pred             EEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc-ceEEee
Q psy8774         250 IFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG-KVTVKV  308 (427)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~-~~~~~t  308 (427)
                                    ........++++|.+|.|++.|.|+|+|+|..|.|.+|. .+.+.+
T Consensus        65 --------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t  110 (118)
T 2yrz_A           65 --------------LNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIES  110 (118)
T ss_dssp             --------------EEESCTTCCEEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCC
T ss_pred             --------------EEcCCCCcCEEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCC
Confidence                          112234577899999999999999999999999999987 444444

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.53  E-value=1.2e-13  Score=106.69  Aligned_cols=108  Identities=25%  Similarity=0.390  Sum_probs=86.7

Q ss_pred             eEEeCC-CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcE
Q psy8774          79 RYYTTP-EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIE  157 (427)
Q Consensus        79 ~~~~t~-~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~  157 (427)
                      +.+.|. ...++.+|.++++...+.+++.|+|++|.  ..++.+.+|.|+|+..+... +.......+++.|.+|.|++.
T Consensus         7 ~~~~T~~~~~~P~~P~~l~~~~~~~~si~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~   83 (116)
T 1x5g_A            7 GRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPV--SGNGEIQNYKLYYMEKGTDK-EQDVDVSSHSYTINGLKKYTE   83 (116)
T ss_dssp             CCCSSCCCSSCCCCCSSCEEEEEETTEEEEECCCCS--CCSSCCSEEEEEEEETTCCC-CCCEEECSSEEEECSCCTTCE
T ss_pred             eEEEcCCCCCCCcCCCccEEEecCCCEEEEEEeCCC--CCCCcccEEEEEEEECCCCc-cEEEecCCceEEEcCCCCCCE
Confidence            345553 22344678899999999999999999984  46678999999999874332 333445688999999999999


Q ss_pred             EEEEEEEeeCCCCCCCCCCeEEEcccccCCCC
Q psy8774         158 YSAEVQAITKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       158 Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      |.|+|+|.|..|.|.+|..+.++|..+.|.++
T Consensus        84 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~p~  115 (116)
T 1x5g_A           84 YSFRVVAYNKHGPGVSTPDVAVRTLSDSGPSS  115 (116)
T ss_dssp             EEEEEEEECSSCCCCBCCCCCEECCCSSCCCC
T ss_pred             EEEEEEEEcCCCcCCCCCCEEEECCCCCCCCC
Confidence            99999999999999999999999977766554

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.53  E-value=6.6e-14  Score=109.14  Aligned_cols=116  Identities=23%  Similarity=0.190  Sum_probs=84.7

Q ss_pred             CCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeE
Q psy8774         171 GPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI  250 (427)
Q Consensus       171 ~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (427)
                      +..+......+..++|.+|.++++...+.+++.|+|.++...++.+.+|.|+|+....  ...|...             
T Consensus         3 ~~~~~~~~~~~~~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~--~~~w~~~-------------   67 (121)
T 1x4z_A            3 SGSSGSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKK--VGDWILA-------------   67 (121)
T ss_dssp             CCCCCCCCCSSSCCCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSS--CCCCEEE-------------
T ss_pred             cccccceeccCcCCCCccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCC--CCceEEe-------------
Confidence            3344444555567788999999999999999999999766555679999999988631  2233100             


Q ss_pred             EeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                                   ........++++|.+|.|++.|.|+|+|.|..|.|.+|......+.+..+|
T Consensus        68 -------------~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~~P  118 (121)
T 1x4z_A           68 -------------TSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGSGP  118 (121)
T ss_dssp             -------------EEEECTTCCEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSSCC
T ss_pred             -------------ecccCCCcCEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCCCC
Confidence                         011234567899999999999999999999999999998765333344444

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=1.7e-13  Score=104.57  Aligned_cols=99  Identities=25%  Similarity=0.461  Sum_probs=81.4

Q ss_pred             CCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEcc-C-CCceEEEeeeeeEEEEccCCCCcEEEE
Q psy8774          83 TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI-D-ANNVIHRNTTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        83 t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~-~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~  160 (427)
                      |.+.+| .+|.++++...+.++|.|+|++|.  ..+|.|.+|.|+|+..+ . ...........+.+.|.+|.|++.|.|
T Consensus         3 T~~~~P-~~p~~l~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~   79 (109)
T 2e7h_A            3 SGSSGP-PAVSDIRVTRSSPSSLSLAWAVPR--APSGAVLDYEVKYHEKGAEGPSSVRFLKTSENRAELRGLKRGASYLV   79 (109)
T ss_dssp             SSCCSS-CCCCCCEEEEEETTEEEEECCCCC--CSSSCCCEEEEEEEETTCCSTTTSEEEEESSSEEEEESCCTTSCEEE
T ss_pred             CCCCCC-CCCCccEEEecCCCEEEEEeCCCC--CCCCcEeEEEEEEEECCCCCCceeEEEccCCCEEEECCCCCCCeEEE
Confidence            445555 458899999999999999999994  67788999999999874 1 222334455678999999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEcccc
Q psy8774         161 EVQAITKAGPGPWSPKLSLMTARD  184 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t~~~  184 (427)
                      +|+|.|..|.|++|..+.++|...
T Consensus        80 ~V~A~n~~G~g~~S~~~~~~T~~~  103 (109)
T 2e7h_A           80 QVRARSEAGYGPFGQEHHSQTQLD  103 (109)
T ss_dssp             EEEEECSSCBCCCCSCEECCCCCC
T ss_pred             EEEEEeCCccCCCCCCEEEEcCCC
Confidence            999999999999999999988543

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=1.5e-13  Score=104.27  Aligned_cols=99  Identities=23%  Similarity=0.366  Sum_probs=82.6

Q ss_pred             CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEE
Q psy8774          85 EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        85 ~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      ..+| .+|.++++...+.+++.|+|++|.  ..++.+.+|.|+|+.... ..+.......+++.|.+|.|++.|.|+|+|
T Consensus         5 ~~~P-~~P~~l~~~~~~~~si~l~W~~p~--~~~g~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A   80 (106)
T 2ed8_A            5 SSGP-GPVENLQAVSTSPTSILITWEPPA--YANGPVQGYRLFCTEVST-GKEQNIEVDGLSYKLEGLKKFTEYSLRFLA   80 (106)
T ss_dssp             CCCC-CCCEEEEEECSSTTEEEEEEECCS--SCSSCCCEEEEEEEETTT-CCEEEEEECSSCEEEESCCTTCEEEEEEEE
T ss_pred             CCCC-cCCceeEEEecCCCEEEEEECCCC--CCCCCeeEEEEEEEECCC-CceEEEeCCccEEEECCCCCCCEEEEEEEE
Confidence            3445 479999999999999999999994  566789999999988743 334444556899999999999999999999


Q ss_pred             eeCCCCCCCCCCeEEEcccccCC
Q psy8774         165 ITKAGPGPWSPKLSLMTARDMVR  187 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~~t~~~~p~  187 (427)
                      .|..|.|.+|..+.++|..+.|.
T Consensus        81 ~n~~G~g~~S~~~~~~T~~~~P~  103 (106)
T 2ed8_A           81 YNRYGPGVSTDDITVVTLSDSGP  103 (106)
T ss_dssp             ECSSCEEEECCCEEEECCCCCCC
T ss_pred             EeCCccCCCcCCEEEEcCCCCCC
Confidence            99999999999999999776643

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=2.2e-13  Score=106.21  Aligned_cols=106  Identities=19%  Similarity=0.236  Sum_probs=84.1

Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcce----eEEEEEEEEccCC-CceEEEeeeeeEEEEccCCCC
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQI----VLYNVKFHKKIDA-NNVIHRNTTQTKAVFSNLEEG  155 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i----~~Y~v~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~  155 (427)
                      +.+....|+.+|.++++...+.++|.|+|.++.  ..++.+    .+|.|+|+..+.. ..........+++.|.+|.|+
T Consensus        11 ~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~--~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~v~gL~P~   88 (123)
T 2edd_A           11 SVPDLSTPMLPPVGVQAVALTHDAVRVSWADNS--VPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTTSLSYTATGLKPN   88 (123)
T ss_dssp             SCSSCCCSSCCCEEEEEEEEETTEEEEEEECSS--SCSSCCCSCCCCEEEEEEETTCTTCCCCCEEESSSEEEEESCCTT
T ss_pred             CCCccCCCCCCCcceEEEEcCCCeEEEEecCCC--CCcccccCcCceEEEEEEECCCCCccEEEEeCCceEEEecCCCCC
Confidence            445556677899999999999999999999874  333334    4999999886322 222333445889999999999


Q ss_pred             cEEEEEEEEeeCCCCCCCCCCeEEEcccc-cCCC
Q psy8774         156 IEYSAEVQAITKAGPGPWSPKLSLMTARD-MVRA  188 (427)
Q Consensus       156 t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~-~p~~  188 (427)
                      +.|.|+|+|.|..|.|++|..+.++|.++ +|..
T Consensus        89 T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~~~Ps~  122 (123)
T 2edd_A           89 TMYEFSVMVTKNRRSSTWSMTAHATTYEASGPSS  122 (123)
T ss_dssp             CEEEEEEEECCSSSCCCCCCCEEEECCCSSSCCC
T ss_pred             CEEEEEEEEeCCCcccCCCCCEEEEccCCCCCCC
Confidence            99999999999999999999999999877 6643

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.52  E-value=2e-13  Score=106.18  Aligned_cols=107  Identities=21%  Similarity=0.296  Sum_probs=85.0

Q ss_pred             cceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCC
Q psy8774          77 TVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEE  154 (427)
Q Consensus        77 ~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p  154 (427)
                      ....+.|...+| .+|.++++...+.+++.|+|++|. .+.++.+.+|.|+|+............  ...+.+.|.+|.|
T Consensus         7 ~~~~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~-~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p   84 (120)
T 1x5f_A            7 GEHAPATTGPLP-SAPRDVVASLVSTRFIKLTWRTPA-SDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMP   84 (120)
T ss_dssp             SSCCCCCCCCCC-CCCEEEEEEEECSSCEEEEEECCS-SCSSCCSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCT
T ss_pred             CCEEecCCCCCC-CCCCCcEEEecCCCEEEEEECCCC-CCCCCcEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCC
Confidence            344555666555 679999999999999999999984 367789999999999874332222222  3488999999999


Q ss_pred             CcEEEEEEEEeeCCCCCCCCCCeEEEccccc
Q psy8774         155 GIEYSAEVQAITKAGPGPWSPKLSLMTARDM  185 (427)
Q Consensus       155 ~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~  185 (427)
                      ++.|.|+|+|.|..|.|.+|..+.++|..+.
T Consensus        85 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~  115 (120)
T 1x5f_A           85 ATVYIFRVMAQNKHGSGESSAPLRVETQPES  115 (120)
T ss_dssp             TCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred             CCEEEEEEEEECCCccCCCCCCEEEEeCCCC
Confidence            9999999999999999999999999985443

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1

Probab=99.52  E-value=3.5e-14  Score=107.67  Aligned_cols=101  Identities=26%  Similarity=0.319  Sum_probs=78.6

Q ss_pred             ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCc-eeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         182 ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGK-ILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       182 ~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~-i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      .+++|.+|.++.+...+.+ +.|+|++|...+|. |.+|.|+|+.....   .|.....                     
T Consensus         3 ~~~~P~~P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~---~~~~~~~---------------------   57 (105)
T 2haz_A            3 HMDTPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEE---VWHSKWY---------------------   57 (105)
T ss_dssp             CCCCCCCCEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCC---CCEEEEE---------------------
T ss_pred             CCCCCcCCCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCC---CCccceE---------------------
Confidence            3567788999999888888 99999999877787 99999999987322   1200000                     


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                         ........++++|.+|.|++.|.|+|+|+|..|.|++|..+.++|.|
T Consensus        58 ---~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p  104 (105)
T 2haz_A           58 ---DAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP  104 (105)
T ss_dssp             ---EHHHHHHHSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred             ---EccccCCccEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence               01112245789999999999999999999999999999999999854

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.52  E-value=1.3e-13  Score=107.25  Aligned_cols=115  Identities=23%  Similarity=0.258  Sum_probs=85.4

Q ss_pred             CcCcccc-eEEeCCCCCCCCCCeeeEEE-eecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-eeeeeEEE
Q psy8774          72 GYGQETV-RYYTTPEGPPTGPPANISHH-FQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-NTTQTKAV  148 (427)
Q Consensus        72 g~~~~~~-~~~~t~~~~p~~~p~~~~~~-~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~  148 (427)
                      |.|+.+. ..+.|....| .+|.++.+. ..+.+++.|+|++|. ...+..+.+|.|+++.......+... ....+++.
T Consensus         1 G~s~~S~~~~~~t~~~~P-~~P~~~~~~~~~~~~sv~l~W~~p~-~~gg~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~   78 (120)
T 2crm_A            1 GSSGSSGVVEFTTCPDKP-GIPVKPSVKGKIHSHSFKITWDPPK-DNGGATINKYVVEMAEGSNGNKWEMIYSGATREHL   78 (120)
T ss_dssp             CCCTTCSCCSCCSCCCCC-CCCCCCEEEEEEETTEEEEECCCCT-TCCSSCCCEEEEEEEESSSSCCCEEEECSSCSEEE
T ss_pred             CCCCCcCCEEEEeCCCCC-CCCCCCEEeeccCCCEEEEEECCCC-cCCCCeeeEEEEEEccCCCCcCCEEEEeccccEEE
Confidence            3455443 3345555555 567777776 778899999999984 22234789999999987443344433 35588999


Q ss_pred             EccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCC
Q psy8774         149 FSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRA  188 (427)
Q Consensus       149 i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~  188 (427)
                      +.+|.|++.|.|+|+|.|..|.|.+|..+.++|...+|.+
T Consensus        79 v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~p~p  118 (120)
T 2crm_A           79 CDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVSGPS  118 (120)
T ss_dssp             ECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCSCCS
T ss_pred             ECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCCCCC
Confidence            9999999999999999999999999999988886655443

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}

Probab=99.52  E-value=7.7e-14  Score=108.85  Aligned_cols=106  Identities=24%  Similarity=0.292  Sum_probs=78.3

Q ss_pred             ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCc-eeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         182 ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGK-ILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       182 ~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~-i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      ..+.|.+|.++.+...+.+ +.|+|++|...+|. |.+|.|+|+....   ..|.....                     
T Consensus         4 ~~~~P~~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~---~~~~~~~~---------------------   58 (122)
T 2e3v_A            4 GSSGPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGE---EVWHSKWY---------------------   58 (122)
T ss_dssp             --CCCCCCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTC---CSCEEEEE---------------------
T ss_pred             CCcCCcCCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCC---CCccccee---------------------
Confidence            4567788999999888877 99999999877776 9999999988732   12200000                     


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCc
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPL  315 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~  315 (427)
                         ........++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+..+|.
T Consensus        59 ---~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~~P~  110 (122)
T 2e3v_A           59 ---DAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPS  110 (122)
T ss_dssp             ---EHHHHHTTTEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCC
T ss_pred             ---eeeecCccceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCCCCCC
Confidence               0112245678999999999999999999999999999999888775544443

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A

Probab=99.52  E-value=1.3e-13  Score=120.12  Aligned_cols=173  Identities=18%  Similarity=0.223  Sum_probs=117.5

Q ss_pred             cceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe--------ecCcceEEE--cCCCCCceEEEEEEEEeccCcCc
Q psy8774           6 PEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--------NSKNMSFLI--TNLERGVEYEFRIAGQNHIGYGQ   75 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--------~~~~~~~~~--~~L~p~t~Y~~~V~a~~~~g~~~   75 (427)
                      ....+.++|+++.+.++...+|.|.|+..+. .|....        ......|.+  .++..++.|.|+|.|.+..+  .
T Consensus        33 ~~~~l~C~W~~~~~~~~~~~~y~l~y~~~~~-~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~~V~a~~~~~--~  109 (227)
T 1eer_B           33 RLEDLVCFWEEAASAGVGPGQYSFSYQLEDE-PWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELRVTAASGAP--R  109 (227)
T ss_dssp             SSSCCEEEEEESCCSSCCTTSEEEEEEETTS-CCEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEEEEEETTSCE--E
T ss_pred             CCCEEEEEecCCCCCCCCCccEEEEEEcCCC-CceeccceeccCCCCCceEEEEeCCCcceeeEEEEEEEEecCCCc--c
Confidence            3567899999987644466889999987533 232221        112233333  57788999999999865322  1


Q ss_pred             ccceEEeCCCCCCCCCCeeeEEEeec-CCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEccC
Q psy8774          76 ETVRYYTTPEGPPTGPPANISHHFQT-PDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSNL  152 (427)
Q Consensus        76 ~~~~~~~t~~~~p~~~p~~~~~~~~~-~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L  152 (427)
                       ....+.....+++.||.++.+...+ ...+.|+|++|.....+ .+..|.|+|+.........  ......+++.|.+|
T Consensus       110 -~~~~~~~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~-~~l~Yev~y~~~~~~~w~~~~~~~~~~~~~~l~~L  187 (227)
T 1eer_B          110 -YHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMT-SHIRYEVDVSAGQGAGSVQRVEILEGRTECVLSNL  187 (227)
T ss_dssp             -EEEEECGGGSEECCCCEEEEEEECSSTTCEEEEEECCSSCSCG-GGEEEEEEEECCSSSCCCCEEEECTTCCEEEECCC
T ss_pred             -EEEEEEeeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCcccc-cceEEEEEEEcCCCCCcEEEEEEecCceEEEEccc
Confidence             2233444445566789999988764 78999999998633222 3779999999763221111  22345788999999


Q ss_pred             CCCcEEEEEEEEeeCC----C-CCCCCCCeEEEccc
Q psy8774         153 EEGIEYSAEVQAITKA----G-PGPWSPKLSLMTAR  183 (427)
Q Consensus       153 ~p~t~Y~~~V~a~~~~----g-~~~~s~~~~~~t~~  183 (427)
                      .|++.|.|+|+|....    | .|.+|..+.+.|..
T Consensus       188 ~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~~  223 (227)
T 1eer_B          188 RGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTPS  223 (227)
T ss_dssp             CSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC--
T ss_pred             CCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECcc
Confidence            9999999999999641    3 27889999998844

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.52  E-value=3.1e-14  Score=111.53  Aligned_cols=117  Identities=18%  Similarity=0.227  Sum_probs=85.9

Q ss_pred             CCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEE
Q psy8774         172 PWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIF  251 (427)
Q Consensus       172 ~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (427)
                      ..+..+...+..++|.+|.++++..++.+++.|+|.++...++.|.+|.|+|+.........|....             
T Consensus         4 ~~s~~~~~~~~~~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~-------------   70 (124)
T 1wis_A            4 GSSGTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH-------------   70 (124)
T ss_dssp             CCSCCCCSCCCCCCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEE-------------
T ss_pred             CccccccccCCCCCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEee-------------
Confidence            3444555555677889999999999999999999988876667899999999874211223331000             


Q ss_pred             eeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccce-EEeecCCCCC
Q psy8774         252 YTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV-TVKVKPEDVP  314 (427)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~-~~~t~~~~~P  314 (427)
                                  ........+++++.+|.|++.|.|+|+|.|..|.|.+|... .++| ...+|
T Consensus        71 ------------~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T-~~~~P  121 (124)
T 1wis_A           71 ------------QLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT-LQSGP  121 (124)
T ss_dssp             ------------EEESCTTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEEC-CCSSC
T ss_pred             ------------eEccCCCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEc-CCCCC
Confidence                        00113566789999999999999999999999999999864 4666 44444

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}

Probab=99.52  E-value=9.3e-13  Score=112.80  Aligned_cols=165  Identities=12%  Similarity=0.150  Sum_probs=107.0

Q ss_pred             eEEEEEeeCCCCCCCcce-EeEEEEEEecCc------------cceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCc
Q psy8774           8 VTIELVWSQPTQTYGEIL-GYRVKYGVREHT------------LKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGY   73 (427)
Q Consensus         8 ~sv~l~W~~p~~~~~~i~-~Y~v~~~~~~~~------------~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~   73 (427)
                      ..+..+|++..+..- .. .|.+.|...+..            ...... ......|.+..|...+.|.|+|.|.|..|.
T Consensus        16 ~~~~C~W~~g~~~~l-~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~~~Y~~~V~a~N~~G~   94 (206)
T 3v6o_A           16 TKMTCRWSTSTIQSL-AESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLLSGYTMWIRINHSLGS   94 (206)
T ss_dssp             SCEEEEECCCC---------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTTSCEEEEEEEC---CC
T ss_pred             cEEEEEecCCCcCCc-ccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhcccEEEEEEEEcCCcc
Confidence            678999999764322 23 689988764311            001111 234458889899999999999999999987


Q ss_pred             CcccceEEeCCCCCCCCCCeeeEEEee-cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEee---eeeEEEE
Q psy8774          74 GQETVRYYTTPEGPPTGPPANISHHFQ-TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT---TQTKAVF  149 (427)
Q Consensus        74 ~~~~~~~~~t~~~~p~~~p~~~~~~~~-~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~i  149 (427)
                      +.+....+.....+.+.||.++.+... ..+.+.|+|++|..  .. ....|+|+|+..+....+.....   ....+.+
T Consensus        95 ~~s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~--~~-~~l~yev~y~~~~~~~~w~~~~~~~~~~~~~~l  171 (206)
T 3v6o_A           95 LDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVF--PE-NNLQFQIRYGLSGKEVQWKMYEVYDAKSKSVSL  171 (206)
T ss_dssp             EECCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC-----------CEEEEEEEEESSSSCCCEEEEECC---CEEEE
T ss_pred             ccCCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCC--CC-CcEEEEEEEEECCCCCceEEEecccCcceeEEe
Confidence            665555665555566678989988765 68899999998852  22 35799999998742334444332   2356899


Q ss_pred             ccCCCCcEEEEEEEEeeCCCCCCCCCC
Q psy8774         150 SNLEEGIEYSAEVQAITKAGPGPWSPK  176 (427)
Q Consensus       150 ~~L~p~t~Y~~~V~a~~~~g~~~~s~~  176 (427)
                      .+|.|++.|.|+|+|.+..|.|.+|+.
T Consensus       172 ~~L~p~t~Y~vqVRa~~~~~~G~WSeW  198 (206)
T 3v6o_A          172 PVPDLCAVYAVQVRCKRLDGLGYWSNW  198 (206)
T ss_dssp             CCSCTTSCEEEEEEEEETTSCSCCCCC
T ss_pred             ecCCCCCEEEEEEEEecCCCCCcCCCC
Confidence            999999999999999997777766543

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=99.51  E-value=1e-12  Score=113.53  Aligned_cols=172  Identities=16%  Similarity=0.157  Sum_probs=123.2

Q ss_pred             EEEEeeCCCCCCCcceEeEEEEEEecCccceeEe---ecCcceEEEcCCC--CCceEEEEEEEEeccCcCcccce-EEeC
Q psy8774          10 IELVWSQPTQTYGEILGYRVKYGVREHTLKENLV---NSKNMSFLITNLE--RGVEYEFRIAGQNHIGYGQETVR-YYTT   83 (427)
Q Consensus        10 v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~~L~--p~t~Y~~~V~a~~~~g~~~~~~~-~~~t   83 (427)
                      ..|+|+++...++....|.|+|+.-+...|....   ....+.|.|+++.  +...|.+||+|..+.+.+..+.. .+..
T Consensus        24 ~iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~A~~g~~~S~w~~~~~F~p  103 (221)
T 4doh_R           24 NVLQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVRAIWGTKCSKWAESGRFYP  103 (221)
T ss_dssp             EEEEEECCCCSSCCCCEEEEEEEETTSCCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEEEESSSCBCCCEECCCBCH
T ss_pred             EEEEEcCCCCCCCCCeEEEEEEEECCCCCceecccccCCCCCEEeCCCccccCCCCEEEEEEEEcCCcccCCEecCceec
Confidence            4699999864445678999999976666686543   5667899999874  57789999999998777765432 2222


Q ss_pred             CCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCC--CCcc---------eeEEEEEEEEccCCCceEEEeeeeeEEEEccC
Q psy8774          84 PEGPPTGPPANISHHFQTPDVVCITWDPPLRTH--RNGQ---------IVLYNVKFHKKIDANNVIHRNTTQTKAVFSNL  152 (427)
Q Consensus        84 ~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~--~~~~---------i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L  152 (427)
                      ......+||. +.+. .....|.|.|.+|....  .++.         ...|.|.|++.+.+... ........+.|.+|
T Consensus       104 ~~~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~~-~~~~~~~~~~l~~L  180 (221)
T 4doh_R          104 FLETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTW-SQCVTNHTLVLTWL  180 (221)
T ss_dssp             HHHCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEEE-EEEECSSEEEECSC
T ss_pred             hhhCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcEE-EEeecCcEEEEecC
Confidence            2233446674 7776 46789999999885321  1221         35899999987433322 22344678899999


Q ss_pred             CCCcEEEEEEEEeeC--CCCCCCCCCeEEEcccc
Q psy8774         153 EEGIEYSAEVQAITK--AGPGPWSPKLSLMTARD  184 (427)
Q Consensus       153 ~p~t~Y~~~V~a~~~--~g~~~~s~~~~~~t~~~  184 (427)
                      .|++.|.|+|+|...  .|.|.+|....+.|..+
T Consensus       181 ~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d  214 (221)
T 4doh_R          181 EPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD  214 (221)
T ss_dssp             CTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred             CCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence            999999999999865  67888999999988543

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.50  E-value=3.1e-13  Score=104.91  Aligned_cols=103  Identities=20%  Similarity=0.345  Sum_probs=82.4

Q ss_pred             EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcE
Q psy8774          80 YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIE  157 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~  157 (427)
                      .+.+...+| .+|.++.+...+.+++.|+|++|.  +.++.+.+|.|+|+............  ...+.+.|.+|.|++.
T Consensus        10 ~~~~~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~   86 (119)
T 2ed7_A           10 AIPSSSVLP-SAPRDVVPVLVSSRFVRLSWRPPA--EAKGNIQTFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAM   86 (119)
T ss_dssp             SCCCSSSSC-CCCSCCEEEEECSSCEEEECCCCS--CCSSCEEEEEEEEEESSCCCCEEEECCCTTCCEEEECSCCSSSE
T ss_pred             cCCCCCCCC-cCCcceEEEecCCCEEEEEEeCCC--CCCCcEEEEEEEEEeCCCCcceeeEeecCCceEEEeCCCCCCCE
Confidence            344455544 679999999999999999999984  56778999999998874332222222  3478999999999999


Q ss_pred             EEEEEEEeeCCCCCCCCCCeEEEccccc
Q psy8774         158 YSAEVQAITKAGPGPWSPKLSLMTARDM  185 (427)
Q Consensus       158 Y~~~V~a~~~~g~~~~s~~~~~~t~~~~  185 (427)
                      |.|+|+|.|..|.|.+|..+.++|..+.
T Consensus        87 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~  114 (119)
T 2ed7_A           87 YTFRVVAYNEWGPGESSQPIKVATQPES  114 (119)
T ss_dssp             EEECCEEEESSCBCSCCCCEEEECCCCS
T ss_pred             EEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence            9999999999999999999999986543

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}

Probab=99.50  E-value=1.3e-13  Score=105.08  Aligned_cols=95  Identities=22%  Similarity=0.310  Sum_probs=78.2

Q ss_pred             cccCCCCCceEEEe--eeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         183 RDMVRAPLGVKALA--TSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       183 ~~~p~~p~~l~~~~--~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      .+.|.+|.++++..  .+.+++.|+|++|...++.+.+|+|+|+....   ..|                          
T Consensus         5 ~~~P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~---~~~--------------------------   55 (108)
T 2dm4_A            5 SSGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGS---KMW--------------------------   55 (108)
T ss_dssp             CCCTTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTC---SCC--------------------------
T ss_pred             CCCCcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCC---CCe--------------------------
Confidence            45678999998876  57899999999998777899999999988632   222                          


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                         .. .....++++|.+|.|++.|.|+|+|+|..|.|++|..+.++|..
T Consensus        56 ---~~-~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~  101 (108)
T 2dm4_A           56 ---AS-QRAASNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK  101 (108)
T ss_dssp             ---EE-EEESSSEEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred             ---EE-ecCCccEEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence               11 12345689999999999999999999999999999999999854

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.50  E-value=2.4e-13  Score=104.28  Aligned_cols=102  Identities=19%  Similarity=0.250  Sum_probs=80.3

Q ss_pred             CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCC--cceeEEEEEEEEccCC-CceEEEeeeeeEEEEccCCCCcEEEEEE
Q psy8774          86 GPPTGPPANISHHFQTPDVVCITWDPPLRTHRN--GQIVLYNVKFHKKIDA-NNVIHRNTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        86 ~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~--~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      ..|+.+|.++++...+.++|.|+|.++.....+  +.+.+|.|.|+..... ..........+++.|.+|+|+|.|.|+|
T Consensus         6 ~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~i~gL~P~T~Y~f~V   85 (113)
T 1x5j_A            6 SGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSV   85 (113)
T ss_dssp             CCCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECCBCSSEEEEESCCTTCEECCEE
T ss_pred             CCCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEEEEecCcCEEEeCCCCCCcEEEEEE
Confidence            457788999999999999999999998532221  2244999999874221 2223333567899999999999999999


Q ss_pred             EEeeCCCCCCCCCCeEEEcccc-cCC
Q psy8774         163 QAITKAGPGPWSPKLSLMTARD-MVR  187 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~~~~t~~~-~p~  187 (427)
                      +|.+..|.|++|..+.++|.++ +|.
T Consensus        86 ~A~~~~G~g~~S~~v~~~T~~~~~Ps  111 (113)
T 1x5j_A           86 MVTKGRRSSTWSMTAHGTTFELSGPS  111 (113)
T ss_dssp             EEECSSCBCCCCCCCCEECCCSSCCC
T ss_pred             EEecCCccCCCcccEEeeccCCCCCC
Confidence            9999999999999999999776 654

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.50  E-value=2.1e-13  Score=103.53  Aligned_cols=98  Identities=20%  Similarity=0.238  Sum_probs=79.0

Q ss_pred             cccccCCCCCceEEEeeeCcEEEEEe--eeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccc
Q psy8774         181 TARDMVRAPLGVKALATSDQSVEVWW--KPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVE  258 (427)
Q Consensus       181 t~~~~p~~p~~l~~~~~~~~si~v~W--~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (427)
                      |..++|.+|.+|++...+.++|.|+|  .+|...+|. .+|.|+|+...  ....+                        
T Consensus         5 T~~~~P~~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~-~~Y~v~y~~~~--~~~~~------------------------   57 (107)
T 1x5a_A            5 SSGAESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGN-LSYELHVLNQD--EEWHQ------------------------   57 (107)
T ss_dssp             TTTCCCCCSCCCCEEEEETTEEEEECCCCCSSCCSSC-CEEEEEEECSS--CEEEE------------------------
T ss_pred             CCCCCCCCCCceEEEecCCCEEEEEECCCCCCCCCCc-eEEEEEEEeCC--CCceE------------------------
Confidence            56678889999999999999999999  988877788 99999998651  11111                        


Q ss_pred             ccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         259 DLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       259 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                           .  ..  ...++|.+|+|++.|.|+|+|.|..|.|++|..+.++|.+...|
T Consensus        58 -----~--~~--~~~~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp  104 (107)
T 1x5a_A           58 -----M--VL--EPRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP  104 (107)
T ss_dssp             -----E--ES--SSEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred             -----E--Ee--cceEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence                 1  11  12289999999999999999999999999999999998765433

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.49  E-value=4.6e-14  Score=106.55  Aligned_cols=100  Identities=16%  Similarity=0.162  Sum_probs=79.6

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      .+|.+|.++.+.. ..+++.|+|++|...++.|.+|.|+|+..    ...|...                          
T Consensus         6 ep~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~----~~~W~~~--------------------------   54 (108)
T 1v5j_A            6 SGLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQG----SQGWEVL--------------------------   54 (108)
T ss_dssp             CCCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEET----TCCCEEE--------------------------
T ss_pred             CCCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeC----CCCcEEe--------------------------
Confidence            4558999999976 56789999999997778999999999873    1234100                          


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                      ........+++++.+|.+++.|.|+|.|+|..|.|..|..+.++|.....|
T Consensus        55 ~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~~~~  105 (108)
T 1v5j_A           55 DPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSGP  105 (108)
T ss_dssp             EEEECSSCCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCSSC
T ss_pred             eeecCCCcCEEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCcccC
Confidence            012345678999999999999999999999999999999999998655444

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.49  E-value=1.2e-13  Score=108.69  Aligned_cols=119  Identities=18%  Similarity=0.216  Sum_probs=84.5

Q ss_pred             CCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeE
Q psy8774         171 GPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI  250 (427)
Q Consensus       171 ~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (427)
                      +..|..+.+.. .++|.+|.++++...+.+++.|+|.++...++.+.+|.|+|+.... ....|..              
T Consensus         3 s~~s~~~~~~v-~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~-~~~~w~~--------------   66 (127)
T 1uey_A            3 SGSSGPTPAPV-YDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMH-KPGLWHH--------------   66 (127)
T ss_dssp             CCCCCCCCCCC-CCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTT-CTTCEEE--------------
T ss_pred             CCCcEEEEEEe-ecCCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCC-CCCccEE--------------
Confidence            33454544443 4678999999999999999999999886666789999999987532 1222310              


Q ss_pred             EeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc-eEEeec---CCCCCcceEE
Q psy8774         251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK-VTVKVK---PEDVPLSLRA  319 (427)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~-~~~~t~---~~~~P~~l~~  319 (427)
                                   ........+. .+.+|.|++.|.|+|+|.|..|.|.+|.. ..++|.   |..+|.+|++
T Consensus        67 -------------~~~~~~~~~~-~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~  125 (127)
T 1uey_A           67 -------------QTEVSGTQTT-AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPS  125 (127)
T ss_dssp             -------------EEEEESSCCE-EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCCC
T ss_pred             -------------EeeeCCCceE-EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCCCCCCCceeEe
Confidence                         0111223334 47799999999999999999999999987 467764   3345666654

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.49  E-value=5.1e-13  Score=101.73  Aligned_cols=99  Identities=23%  Similarity=0.371  Sum_probs=81.7

Q ss_pred             CCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc-eEEEeeeeeEEEEccCCCCcEEEEE
Q psy8774          83 TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN-VIHRNTTQTKAVFSNLEEGIEYSAE  161 (427)
Q Consensus        83 t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~  161 (427)
                      |.+.+| .+|.++++...+.+++.|+|++|  ...++.+.+|.|+|+....... ........+++.|.+|.|++.|.|+
T Consensus         3 T~~~~P-~~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~   79 (108)
T 2djs_A            3 SGSSGP-STVPIMHQVSATMRSITLSWPQP--EQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQ   79 (108)
T ss_dssp             SCCCCC-CCCSCCEEEEECSSEEEEECCCC--SCCSSCEEEEEEEEEETTSCSTTCEEEEESSSEEEEESCCTTCEEEEE
T ss_pred             cCCCCC-CCCcceEEEecCCCEEEEEECCC--CCCCCeEEEEEEEEEECCCCCcceeEEecCccEEEEcCCCCCCEEEEE
Confidence            445555 46889999999999999999998  4677889999999998743322 2334466899999999999999999


Q ss_pred             EEEeeCCCCCCCCCCeEEEcccc
Q psy8774         162 VQAITKAGPGPWSPKLSLMTARD  184 (427)
Q Consensus       162 V~a~~~~g~~~~s~~~~~~t~~~  184 (427)
                      |+|.|..|.|++|..+.++|..+
T Consensus        80 V~A~n~~G~g~~S~~~~~~T~~~  102 (108)
T 2djs_A           80 VRARTVAGYGKFSGKMCFQTLTD  102 (108)
T ss_dssp             EEEEESSCEEEECCCEEEECCCS
T ss_pred             EEEEeCCEECCCCCCEEEEeCCC
Confidence            99999999999999999998544

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.49  E-value=2.8e-13  Score=103.76  Aligned_cols=102  Identities=25%  Similarity=0.383  Sum_probs=83.4

Q ss_pred             EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCC-CceEEEeeeeeEEEEccCCCCcEE
Q psy8774          80 YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDA-NNVIHRNTTQTKAVFSNLEEGIEY  158 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y  158 (427)
                      .+.|.+.+| .+|.++++...+.+++.|+|++|  ...++.+.+|.|+|+..+.. ..........+.+.|.+|.|++.|
T Consensus         3 ~~~T~~~~P-~~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y   79 (111)
T 1x5l_A            3 SGSSGQAAP-SQVVVIRQERAGQTSVSLLWQEP--EQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRY   79 (111)
T ss_dssp             CCCCSCCCC-CCCCCEECSCBCSSCEEEEECCC--SCCCSCCCEEEEEEEESSSCCSSCEEEEESSSEEEECSCCTTCEE
T ss_pred             eEEcCCCCC-CCCceEEEEEcCCCEEEEEECCC--CCCCCEEEEEEEEEEECCCCceeEEEecCCCCEEEEcCCCCCCEE
Confidence            345666666 45789998888999999999998  45678899999999987422 233344566899999999999999


Q ss_pred             EEEEEEeeCCCCCCCCCCeEEEcccc
Q psy8774         159 SAEVQAITKAGPGPWSPKLSLMTARD  184 (427)
Q Consensus       159 ~~~V~a~~~~g~~~~s~~~~~~t~~~  184 (427)
                      .|+|+|.|..|.|++|..+.++|...
T Consensus        80 ~~~V~A~n~~G~g~~S~~~~~~T~~~  105 (111)
T 1x5l_A           80 VFQVRARTSAGCGRFSQAMEVETGKP  105 (111)
T ss_dssp             EECEEEEETTEECCCCCCEEEECCCT
T ss_pred             EEEEEEEeCCcCCCCcccEEEEcCCC
Confidence            99999999999999999999998554

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.49  E-value=1.5e-13  Score=105.35  Aligned_cols=101  Identities=16%  Similarity=0.113  Sum_probs=78.7

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCCCCCce----eEEEEEEEecccccccccccccccccccccceeEEeeecccc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKI----LGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVE  258 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i----~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (427)
                      ..+|.+|.+|++..++.++|.|+|.+|...++.+    .+|.|.|+...   .....                       
T Consensus         6 ~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~---~~~~~-----------------------   59 (113)
T 1x5j_A            6 SGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNI---PANTK-----------------------   59 (113)
T ss_dssp             CCCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSS---SSSCC-----------------------
T ss_pred             CCCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECC---CCCeE-----------------------
Confidence            3567899999999999999999999987655444    49999998631   11110                       


Q ss_pred             ccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         259 DLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       259 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                           ........++++|.+|+|++.|.|+|+|++..|.|++|..+.++|.+..+|
T Consensus        60 -----~~~~~~~~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~~~P  110 (113)
T 1x5j_A           60 -----YKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELSGP  110 (113)
T ss_dssp             -----CEECCBCSSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCSSCC
T ss_pred             -----EEEEecCcCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCCCCC
Confidence                 112234567899999999999999999999999999999999999554144

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=1.2e-13  Score=106.71  Aligned_cols=98  Identities=13%  Similarity=0.131  Sum_probs=77.4

Q ss_pred             EEEccc-ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecc
Q psy8774         178 SLMTAR-DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTA  256 (427)
Q Consensus       178 ~~~t~~-~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (427)
                      ...+.+ ++|.+|.++++...+ +++.|+|++|...+|.+.+|.|+|+...   ....                      
T Consensus         9 ~~~t~e~~~P~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~---~~~~----------------------   62 (116)
T 2edb_A            9 ENDLDESQVPDQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGS---PYAE----------------------   62 (116)
T ss_dssp             SSSCBCSSCCCCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESS---TTSE----------------------
T ss_pred             cccCCCCCCCCCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCC---CCeE----------------------
Confidence            334444 678999999999988 9999999999877889999999998531   1111                      


Q ss_pred             ccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         257 VEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                             ........++++|.+|+|++.|.|+|+|+|..|.|..+. ..+.|.
T Consensus        63 -------~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~-~~~~T~  107 (116)
T 2edb_A           63 -------TVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGVPLY-ESATTR  107 (116)
T ss_dssp             -------EEEEETTCCEEEECSCCSSSBEEEEEEEEETTEECSCEE-ECCBCC
T ss_pred             -------EEEeCCCeeEEEeCCCCCCCEEEEEEEEEeCCccCCCCc-ceeecc
Confidence                   223345678999999999999999999999999998765 455553

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=99.49  E-value=1.7e-12  Score=110.93  Aligned_cols=165  Identities=13%  Similarity=0.150  Sum_probs=119.5

Q ss_pred             EEEEEeeCCCCCCCcceEeEEEEEE-----ecCccceeEe---ecCcceEEEcC-CCCCceEEEEEEEEeccCcCcccce
Q psy8774           9 TIELVWSQPTQTYGEILGYRVKYGV-----REHTLKENLV---NSKNMSFLITN-LERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         9 sv~l~W~~p~~~~~~i~~Y~v~~~~-----~~~~~~~~~~---~~~~~~~~~~~-L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      ...|+|+++... .....|.|+|+.     -+...|....   ....+.|.|++ |..+..|.+||+|.+..+.+..+..
T Consensus        21 ~~iL~W~p~~~~-~~~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~~RVrA~~~~~~S~w~~~   99 (206)
T 4doh_B           21 KHLLMWSPVIAP-GETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGSQTSAWSIL   99 (206)
T ss_dssp             EEEEECCCCCCS-SSCCEEEEEEEEHHHHHHSTTCCEEEEEEEEESSSEEECTTTCCSSSCEEEEEEEEETTEECCCEEC
T ss_pred             EEEEEECCCCCC-CCCEEEEEEEEEeccccCCCccceecccccCCCCCEEcCCccccCCCCEEEEEEEEcCCCccCcccc
Confidence            368999998532 234789999984     3555687653   66788999995 7789999999999998887765432


Q ss_pred             -EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE--eeeeeEEEEccCCCCc
Q psy8774          80 -YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--NTTQTKAVFSNLEEGI  156 (427)
Q Consensus        80 -~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t  156 (427)
                       .+........+|| .+.+. ....+|.|.|.+|      +.+..|.|.|+..+........  ....+.+.|.+|.|++
T Consensus       100 ~~f~~~~~t~i~PP-~v~v~-~~~~~i~V~~~~p------~~~l~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t  171 (206)
T 4doh_B          100 KHPFNRQSTILTRP-GMEIT-KDGFHLVIELEDL------GPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGA  171 (206)
T ss_dssp             SSCBCGGGCBCCCC-CEEEE-EETTEEEEEECCC------CTTCEEEEEEEESSSSCCCEEEEECCSSSEEEEEECCSSS
T ss_pred             ccccchhhcccCCC-eEEEE-eCCCEEEEEecCC------CCcEEEEEEEEEcCCCceeEEeEEccCCeEEEEeCCCCCC
Confidence             1222212223445 46666 4788999999987      5677999999987544432222  2235789999999999


Q ss_pred             EEEEEEEEeeC--CCCCCCCCCeEEEcc
Q psy8774         157 EYSAEVQAITK--AGPGPWSPKLSLMTA  182 (427)
Q Consensus       157 ~Y~~~V~a~~~--~g~~~~s~~~~~~t~  182 (427)
                      .|.|+|+|...  .+.|.+|....+.|.
T Consensus       172 ~Ycv~Vra~~~~~~~~g~~S~~~C~~t~  199 (206)
T 4doh_B          172 AYCVKAQTFVKAIGRYSAFSQTECVEVQ  199 (206)
T ss_dssp             CEEEEEEEEEGGGTEECCCCCCEEECC-
T ss_pred             cEEEEEEEEecCCCCCCCCCCCEeEEcc
Confidence            99999999875  377888988888874

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=9.5e-14  Score=104.83  Aligned_cols=98  Identities=31%  Similarity=0.529  Sum_probs=82.5

Q ss_pred             CCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEE
Q psy8774          83 TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        83 t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      +.+..|+.+|.++++...+.+++.|+|++|.....++.+.+|.|+|+..+. ..+.......+++.|.+|.|++.|.|+|
T Consensus         3 t~e~~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   81 (103)
T 2edy_A            3 SGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINS-QQELQNITTDTRFTLTGLKPDTTYDIKV   81 (103)
T ss_dssp             TTCCCCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTS-CCEEEEEESSSCCEECSCCTTCCEEEEC
T ss_pred             CCCCCCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCC-CccEEEcCCcceEEEcCCCCCCEEEEEE
Confidence            456678888999999988999999999999544567889999999998743 3334444567889999999999999999


Q ss_pred             EEeeCCCCCCCCCCeEEEc
Q psy8774         163 QAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~~~~t  181 (427)
                      +|.|..|.|++|..+.++|
T Consensus        82 ~A~n~~G~g~~S~~~~~~T  100 (103)
T 2edy_A           82 RAWTSKGSGPLSPSIQSRT  100 (103)
T ss_dssp             CEECSSCBCCCCCCCCCCC
T ss_pred             EEECCCCCCCCCCCEEEEe
Confidence            9999999999998888776

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=3.2e-13  Score=104.23  Aligned_cols=104  Identities=20%  Similarity=0.259  Sum_probs=78.3

Q ss_pred             EeCCC-CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEE
Q psy8774          81 YTTPE-GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYS  159 (427)
Q Consensus        81 ~~t~~-~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~  159 (427)
                      ..+.+ .+| .+|.++++...+ +++.|+|++|.  ..+|.|.+|.|+|+...............+++.|.+|.|++.|.
T Consensus        10 ~~t~e~~~P-~~P~~l~~~~~~-~sv~l~W~~P~--~~ng~i~gY~i~y~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~   85 (116)
T 2edb_A           10 NDLDESQVP-DQPSSLHVRPQT-NCIIMSWTPPL--NPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIERLESSSHYV   85 (116)
T ss_dssp             SSCBCSSCC-CCCSCEEEEECS-SCEEEEECCCS--CTTBCCCEEEEEEEESSTTSEEEEEETTCCEEEECSCCSSSBEE
T ss_pred             ccCCCCCCC-CCCCCeEEEECC-CEEEEEEcCCC--CCCCceeEEEEEEEeCCCCeEEEEeCCCeeEEEeCCCCCCCEEE
Confidence            34444 444 579999999888 99999999994  55788999999998642212222333557899999999999999


Q ss_pred             EEEEEeeCCCCCCCCCCeEEEcccccCCCC
Q psy8774         160 AEVQAITKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       160 ~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      |+|+|.|..|.|..+ ...+.|..+.|.+|
T Consensus        86 ~~V~A~n~~G~g~~~-~~~~~T~~~~P~p~  114 (116)
T 2edb_A           86 ISLKAFNNAGEGVPL-YESATTRSITSGPS  114 (116)
T ss_dssp             EEEEEEETTEECSCE-EECCBCCCSSSCSC
T ss_pred             EEEEEEeCCccCCCC-cceeecccCCCCCC
Confidence            999999999998644 34566666666555

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.48  E-value=3.4e-13  Score=103.95  Aligned_cols=103  Identities=17%  Similarity=0.200  Sum_probs=76.8

Q ss_pred             CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCC---CCcceeEEEEEEEEccCCCceEEE-eeeeeEEEEccCCCCcEEEE
Q psy8774          85 EGPPTGPPANISHHFQTPDVVCITWDPPLRTH---RNGQIVLYNVKFHKKIDANNVIHR-NTTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        85 ~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~---~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~  160 (427)
                      ...|+.+|..+.+..++.+++.|+|++|....   .+..|.+|.|+ ........+... ....+.+.|.+|.|++.|.|
T Consensus        12 ~~~pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve-~~~~~~~~~~~v~~~~~t~~~v~gL~p~t~Y~f   90 (120)
T 1wfu_A           12 KVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIE-EEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKF   90 (120)
T ss_dssp             TCCCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEE-EECTTTCCEEEEEEESCSEEEEESCCTTCEEEE
T ss_pred             eeCCCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEE-EecCCCCceEEEecCCccEEEECCCCCCCEEEE
Confidence            34455666666677889999999999995322   22238999999 443233444333 34467899999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEcccccCCC
Q psy8774         161 EVQAITKAGPGPWSPKLSLMTARDMVRA  188 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t~~~~p~~  188 (427)
                      +|+|.|..|.|.+|..+.++|...++..
T Consensus        91 rV~A~n~~G~s~~S~~~~~~T~~~p~~~  118 (120)
T 1wfu_A           91 RLKVTSPSGEYEYSPVVSVATTRESGPS  118 (120)
T ss_dssp             EEEEECSSSCEEECCCEEEECCCCCCCS
T ss_pred             EEEEECCCCCCCCCccEeeEcCCCCCCC
Confidence            9999999999999999999997655433

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=2.4e-13  Score=102.99  Aligned_cols=97  Identities=20%  Similarity=0.192  Sum_probs=76.5

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      ++.+|.+|++..++.+++.|+|+++.   +.+.+|+|.|+..++....                               .
T Consensus         7 p~~pP~~l~~~~vt~tsi~vsW~pp~---~~i~~Y~I~y~~~~~~~~~-------------------------------~   52 (108)
T 2ee3_A            7 GLAPPRHLGFSDVSHDAARVFWEGAP---RPVRLVRVTYVSSEGGHSG-------------------------------Q   52 (108)
T ss_dssp             CCCCSSCEEEESCCSSCEEEEESCCS---SCCSEEEEEEEETTTCCBC-------------------------------C
T ss_pred             CCCCCceEEEEEccCCeEEEEeeCCC---CCccEEEEEEEeCCCCcee-------------------------------E
Confidence            55899999999999999999999886   7899999999876332111                               1


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCcc
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLS  316 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~~  316 (427)
                      ..+.+..++++|.+|.|++.|.|+|.|+|..|.|..+.. .++|....+|.+
T Consensus        53 ~~v~~~~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~-~~~T~~vP~p~~  103 (108)
T 2ee3_A           53 TEAPGNATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTG-RVTTKKAPSPSS  103 (108)
T ss_dssp             EEEETTCCEEEECSCCSSCEEEEEEEEECTTSCEEEEEE-EEECCCCCCSCC
T ss_pred             EEcCCCcCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccC-EEEeCCCCCCCC
Confidence            223456789999999999999999999999999888864 677753334443

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.47  E-value=8.5e-13  Score=102.76  Aligned_cols=99  Identities=19%  Similarity=0.262  Sum_probs=77.4

Q ss_pred             CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccCCCCcEEEE
Q psy8774          85 EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        85 ~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~  160 (427)
                      ...++.+|.++.+...+.+++.|+|.++  .+.++.+.+|.|+|+.......+...    ....+.+.|.+|.|++.|.|
T Consensus        14 ~~~~P~~P~~~~~~~~~~~sv~l~W~p~--~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~f   91 (121)
T 1x4z_A           14 RLSPPEAPDRPTISTASETSVYVTWIPR--GNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKF   91 (121)
T ss_dssp             SCCCCCCCCCCEEEECCSSEEEEECCCC--CCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEE
T ss_pred             cCCCCccCCCCEEEEccCCEEEEEEECC--CCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEEEE
Confidence            3345577889999999999999999965  45566799999999987423444332    23478999999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeE-EEccccc
Q psy8774         161 EVQAITKAGPGPWSPKLS-LMTARDM  185 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~-~~t~~~~  185 (427)
                      +|+|.|..|.|.+|.... +++...+
T Consensus        92 rV~A~n~~G~s~~S~~~~~v~~~~~~  117 (121)
T 1x4z_A           92 RVRALNMLGESEPSAPSRPYVVSGSG  117 (121)
T ss_dssp             EEEEEETTEECCCCCCCCCEECCSSC
T ss_pred             EEEEEcCCCcCCCcCCCCCEEcCCCC
Confidence            999999999998887775 5554443

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}

Probab=99.47  E-value=4.8e-13  Score=100.80  Aligned_cols=93  Identities=14%  Similarity=0.250  Sum_probs=75.1

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ..+.+|.+|++...+.+++.|+|++|...++.+.+|.|.|+.........                              
T Consensus         6 t~~~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~------------------------------   55 (103)
T 3t04_D            6 SVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ------------------------------   55 (103)
T ss_dssp             CCCCCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE------------------------------
T ss_pred             ccCCCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccE------------------------------
Confidence            45689999999999999999999999877889999999999863211111                              


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEec--cCCCCCccceEEe
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTV--NGLGRLSGKVTVK  307 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~--~G~g~~s~~~~~~  307 (427)
                      ........++++|.+|.|++.|.|+|+|.|.  .|.|+ |.++.+.
T Consensus        56 ~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~~~~~G~~~-S~p~~~~  100 (103)
T 3t04_D           56 EFTVPGYYSTATISGLKPGVDYTITVYAYDTFFPGYEP-NSPISIN  100 (103)
T ss_dssp             EEEEETTCCEEEECSCCTTCCEEEEEEEESCCCTTCCC-SCCEEEE
T ss_pred             EEEcCCCcCEEEeCCCCCCCEEEEEEEEEeCCCCCCCC-CCCEEEe
Confidence            1223456789999999999999999999999  99888 7766654

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.47  E-value=5.9e-13  Score=101.21  Aligned_cols=102  Identities=17%  Similarity=0.294  Sum_probs=79.5

Q ss_pred             CCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--EeeeeeEEEEccCCCCcEEEE
Q psy8774          83 TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        83 t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~  160 (427)
                      |.+++|.. |. +.+...+.+++.|+|++|.  +.++.+.+|.|+|+..+.. .+..  .....+++.|.+|.|++.|.|
T Consensus         3 T~~~~P~~-p~-~~v~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~   77 (107)
T 2dn7_A            3 SGSSGPGR-PT-MMISTTAMNTALLQWHPPK--ELPGELLGYRLQYCRADEA-RPNTIDFGKDDQHFTVTGLHKGTTYIF   77 (107)
T ss_dssp             TCCCCCCC-CE-EEEEECSTTEEEEEEECCS--SCSSCCCEEEEEEEETTCS-SCEEEEEETTCCEEEEECCCTTCEEEE
T ss_pred             CCCCCCCC-Cc-EeEEecCCCEEEEEECCCC--CCCCceeEEEEEEEECCCC-CCEEEEeCCCccEEEeCCCCCCCEEEE
Confidence            45566654 44 6677778999999999984  6678899999999977432 2322  234578999999999999999


Q ss_pred             EEEEeeCCCCCCCCCCeEEEcccccCCCCC
Q psy8774         161 EVQAITKAGPGPWSPKLSLMTARDMVRAPL  190 (427)
Q Consensus       161 ~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~  190 (427)
                      +|+|.|..|.|.++. ..+.|..+.|.+|.
T Consensus        78 ~V~A~n~~G~g~~s~-~~~~T~~~~P~~p~  106 (107)
T 2dn7_A           78 RLAAKNRAGLGEEFE-KEIRTPEDLSGPSS  106 (107)
T ss_dssp             EEEEEETTEEEEEEE-EEEECCCCCCCCCC
T ss_pred             EEEEEcCCcccCCee-eEEeCCCCCCCCCC
Confidence            999999999998877 56778777777764

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.47  E-value=3.9e-13  Score=105.42  Aligned_cols=105  Identities=18%  Similarity=0.218  Sum_probs=80.4

Q ss_pred             ccCcCcccc-eEEeCCCC------CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EE
Q psy8774          70 HIGYGQETV-RYYTTPEG------PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HR  140 (427)
Q Consensus        70 ~~g~~~~~~-~~~~t~~~------~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~  140 (427)
                      ..|.|+.+. ..+.|.+.      +| .+|.++++...+ +++.|+|++|.  ..++.+.+|.|+|+..  .....  ..
T Consensus         3 ~~G~g~~S~~~~~~T~~~~~~~~~~P-~~P~~l~~~~~~-~sv~l~W~~P~--~~~g~i~~Y~v~y~~~--~~~~~~~~~   76 (126)
T 1x5i_A            3 SGSSGPATDWLSAETFESDLDETRVP-EVPSSLHVRPLV-TSIVVSWTPPE--NQNIVVRGYAIGYGIG--SPHAQTIKV   76 (126)
T ss_dssp             SCCCCCCCCCCCSCCCCTTSBCSSCC-CSCSEEEEEEET-TEEEEEEECCS--CTTBCCCEEEEEECSS--CGGGEEEEC
T ss_pred             CCccCCCCCCEEeECccccCccCCCC-CCCCeeEEEecC-CEEEEEEcCCC--CCCCCEeEEEEEEEcC--CCCceEEEe
Confidence            457776553 45666665      55 589999999887 99999999994  5678899999999843  22222  22


Q ss_pred             eeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEc
Q psy8774         141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       141 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t  181 (427)
                      ....+++.|.+|.|++.|.|+|+|+|..|.|..+... +.|
T Consensus        77 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~-~~T  116 (126)
T 1x5i_A           77 DYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYES-AVT  116 (126)
T ss_dssp             CTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCCC-EEC
T ss_pred             CCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceeeE-Eec
Confidence            3457899999999999999999999999999777543 444

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}

Probab=99.46  E-value=1.1e-12  Score=102.18  Aligned_cols=104  Identities=15%  Similarity=0.186  Sum_probs=75.3

Q ss_pred             CCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcc-eeEEEEEEEEccCCCce-EE-E--e--eeeeEEEEccCCCCc
Q psy8774          84 PEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ-IVLYNVKFHKKIDANNV-IH-R--N--TTQTKAVFSNLEEGI  156 (427)
Q Consensus        84 ~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~-i~~Y~v~~~~~~~~~~~-~~-~--~--~~~~~~~i~~L~p~t  156 (427)
                      .+++|.. |.++.+...+.+ +.|+|++|  ...+|. |.+|.|+|+..... .+ .. .  .  ...+.+.|.+|.|++
T Consensus         4 ~~~~P~~-P~~~~~~~~~~t-v~l~W~~P--~~~~G~pI~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~t   78 (122)
T 2e3v_A            4 GSSGPSS-PSIDQVEPYSST-AQVQFDEP--EATGGVPILKYKAEWRAVGEE-VWHSKWYDAKEASMEGIVTIVGLKPET   78 (122)
T ss_dssp             --CCCCC-CEEEEEEECSSC-EEEEEECC--CCC--CCEEEEEEEEEETTCC-SCEEEEEEHHHHHTTTEEEECSCCTTC
T ss_pred             CCcCCcC-CCccEEEecCCc-EEEEECCC--CcCCCCcceEEEEEEEECCCC-CcccceeeeeecCccceEEeCCCCCCC
Confidence            3455655 899998888887 99999998  455666 99999999987432 22 11 1  1  347899999999999


Q ss_pred             EEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCce
Q psy8774         157 EYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGV  192 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l  192 (427)
                      .|.|+|+|.|..|.|++|..+.+++ ...+|.+|..+
T Consensus        79 ~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~~P~~P~~~  115 (122)
T 2e3v_A           79 TYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLE  115 (122)
T ss_dssp             EEEEEEEEEETTEECCCCCCEEEECCCCCCCC-----
T ss_pred             EEEEEEEEEeCCccCCCcccccccccCCCCCCCCeec
Confidence            9999999999999999999999866 33456666543

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.46  E-value=7.3e-13  Score=101.07  Aligned_cols=100  Identities=14%  Similarity=0.155  Sum_probs=79.4

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCc-ceeEEEEEEEEccCCCceE-EEeeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNG-QIVLYNVKFHKKIDANNVI-HRNTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~-~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      ++.+|..+++...+.+++.|+|.++.  +.++ .+.+|.|+|+.......+. ......+++.+.+|.|++.|.|+|+|.
T Consensus         7 ~P~~P~~p~~~~~~~~sv~l~W~~p~--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~   84 (109)
T 1x5x_A            7 GPSMPASPVLTKAGITWLSLQWSKPS--GTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAY   84 (109)
T ss_dssp             CCCCCCCCEEEEECSSEEEEECCCCS--SCCSSSSCEEEEEECCSSSSCCCEEEEEESCSEEEEESCCSSCEEEEEEEEE
T ss_pred             CCcCCCCCEEEEccCCEEEEEEcCCC--CCCCCcccEEEEEEecCCCCcceEEeEeCCccEEEECCCCCCCEEEEEEEEE
Confidence            33556667788889999999999984  3444 7899999998764333333 233457899999999999999999999


Q ss_pred             eCCCCCCCCCCeEEEcccccCCCC
Q psy8774         166 TKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       166 ~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      |..|.|.+|..+.+.|..++|.+|
T Consensus        85 n~~G~s~~S~~~~~~T~~~~P~~p  108 (109)
T 1x5x_A           85 NSEGKSNPSEVVEFTTCPDSGPSS  108 (109)
T ss_dssp             CSSCEEEECCCEEEECCCCCCCCC
T ss_pred             eCCCCcCCccCEEeEeCCCCCCCC
Confidence            999999899999999977776655

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=1e-12  Score=99.66  Aligned_cols=96  Identities=22%  Similarity=0.280  Sum_probs=78.4

Q ss_pred             ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccc
Q psy8774         182 ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       182 ~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      ..++|.+|.++++...+.+++.|+|+++.  ++.+.+|.|+|+.....  ..|                           
T Consensus         4 ~~~~P~~P~~~~~~~~~~~sv~l~W~~~~--~~~i~~Y~v~~~~~~~~--~~~---------------------------   52 (106)
T 2dju_A            4 GSSGPKPPIDLVVTETTATSVTLTWDSGN--SEPVTYYGIQYRAAGTE--GPF---------------------------   52 (106)
T ss_dssp             CCCSCCCCEEEEEEEEETTEEEEEEECCC--SSCCSEEEEEEEETTCC--SCC---------------------------
T ss_pred             CCcCCcCCCCcEEEeccCCEEEEEEcCCC--CCCceEEEEEEEECCCC--CCe---------------------------
Confidence            45677899999999999999999999873  57899999999876321  122                           


Q ss_pred             cccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       262 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                        ........++++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.+
T Consensus        53 --~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~   99 (106)
T 2dju_A           53 --QEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGE   99 (106)
T ss_dssp             --CCBCCCCSSEEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred             --EEccCCCccEEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCC
Confidence              22223456789999999999999999999999999999999988854

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=1.3e-12  Score=99.02  Aligned_cols=98  Identities=19%  Similarity=0.283  Sum_probs=80.7

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe-eeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-TTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      ++.+|.++.+...+.+++.|+|+++.    ++.+.+|.|+|+.......+.... ...+.+.|.+|.|++.|.|+|+|.|
T Consensus         7 ~P~~P~~~~~~~~~~~sv~l~W~~~~----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   82 (106)
T 2dju_A            7 GPKPPIDLVVTETTATSVTLTWDSGN----SEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVN   82 (106)
T ss_dssp             SCCCCEEEEEEEEETTEEEEEEECCC----SSCCSEEEEEEEETTCCSCCCCBCCCCSSEEEEESCCTTCEEEEEEEEEC
T ss_pred             CCcCCCCcEEEeccCCEEEEEEcCCC----CCCceEEEEEEEECCCCCCeEEccCCCccEEEEeCCCCCcEEEEEEEEEe
Confidence            34679999999999999999999872    467899999998874433333332 3578899999999999999999999


Q ss_pred             CCCCCCCCCCeEEEcccccCCCC
Q psy8774         167 KAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       167 ~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      ..|.|.+|..+.++|..++|..|
T Consensus        83 ~~G~~~~S~~~~~~T~~~~P~~P  105 (106)
T 2dju_A           83 SIGRGPPSEAVRARTGEQSGPSS  105 (106)
T ss_dssp             SSCBCCCCCCEEEECCCSSCCCC
T ss_pred             CCccCCCcccEEeEcCCCCCCCC
Confidence            99999999999999977776655

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.46  E-value=6e-13  Score=104.08  Aligned_cols=105  Identities=16%  Similarity=0.213  Sum_probs=80.8

Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEcc--CCCceEEEe-----eeeeEEEEccCC
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI--DANNVIHRN-----TTQTKAVFSNLE  153 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~--~~~~~~~~~-----~~~~~~~i~~L~  153 (427)
                      ..+..+ ++.+|.++++...+.+++.|+|.++  .+.++.|.+|.|+|+...  ....+....     ...+.+.+.+|.
T Consensus        11 ~~~~~~-~P~~P~~l~~~~~~~~sv~l~W~p~--~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~   87 (124)
T 1wis_A           11 SGVPPE-LPGPPTNLGISNIGPRSVTLQFRPG--YDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLN   87 (124)
T ss_dssp             SCCCCC-CCCCCEEEEEESCCSSCEEEEEECC--CCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCC
T ss_pred             ccCCCC-CCccCCCCEEEEecCCEEEEEEECC--CCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCC
Confidence            334444 4477999999999999999999887  466678999999998731  233343321     357899999999


Q ss_pred             CCcEEEEEEEEeeCCCCCCCCCCe-EEEcccccCCC
Q psy8774         154 EGIEYSAEVQAITKAGPGPWSPKL-SLMTARDMVRA  188 (427)
Q Consensus       154 p~t~Y~~~V~a~~~~g~~~~s~~~-~~~t~~~~p~~  188 (427)
                      |++.|.|+|+|.|..|.|.+|... .++|..++|..
T Consensus        88 p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~P~~  123 (124)
T 1wis_A           88 PFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPSS  123 (124)
T ss_dssp             TTSEECCCCEEECSSCBCCCCCCCCCEECCCSSCCC
T ss_pred             CCCEEEEEEEEEECCccCCCcCCccceEcCCCCCCC
Confidence            999999999999999999888764 57776666543

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}

Probab=99.45  E-value=1.6e-11  Score=100.66  Aligned_cols=121  Identities=19%  Similarity=0.205  Sum_probs=93.8

Q ss_pred             eeeeEEEEccCCCCcEEEEEEEEeeC-CCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEE
Q psy8774         142 TTQTKAVFSNLEEGIEYSAEVQAITK-AGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQ  220 (427)
Q Consensus       142 ~~~~~~~i~~L~p~t~Y~~~V~a~~~-~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~  220 (427)
                      ...+++.+.+++ |+.|.|.++...- .+.+.        .....|.||.+|++..++.+++.|+|++|...+| +.+|+
T Consensus       115 ~~vts~~vgdg~-g~~~~~~~~~k~v~i~~~t--------q~ev~p~Pp~NL~At~VT~tSVtLsW~aP~~~~G-I~gY~  184 (238)
T 2w1n_A          115 LSVTNSSVGDGE-GLVHEIAGTEKTVNIIEGT--------SPEIVVNPVRDFKASEINKKNVTVTWTEPETTEG-LEGYI  184 (238)
T ss_dssp             EEEEEEEEECTT-SCEEECBCEEEEEEEECCC--------CCCCCCCCCEEEEEEEECSSCEEEEEECCSCCTT-EEEEE
T ss_pred             eceeeEEEecCC-CcEEEeeccceeeeeccCC--------CCcCccCCCCceEEEEccCCeEEEEecCCCCCCC-ceeEE
Confidence            467888999999 9999997752210 11110        0233568999999999999999999999996666 99999


Q ss_pred             EEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCC
Q psy8774         221 IFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRL  300 (427)
Q Consensus       221 I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~  300 (427)
                      |++...      .                              ........++|++.+|+++|.|.|+|.|.+..|.+..
T Consensus       185 ly~~g~------~------------------------------v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~G~~Ss  228 (238)
T 2w1n_A          185 LYKDGK------K------------------------------VAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSS  228 (238)
T ss_dssp             EEETTE------E------------------------------EEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCBCC
T ss_pred             EEeCCc------e------------------------------eEEeeccceEEEecCCCCCCEEEEEEEEEeCCCCccc
Confidence            987542      0                              1224456689999999999999999999999998887


Q ss_pred             ccceEEee
Q psy8774         301 SGKVTVKV  308 (427)
Q Consensus       301 s~~~~~~t  308 (427)
                      ...+.++|
T Consensus       229 ~e~vtVrT  236 (238)
T 2w1n_A          229 KESLTLRT  236 (238)
T ss_dssp             CEEEEEEC
T ss_pred             cCcEEEEe
Confidence            77777776

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}

Probab=99.45  E-value=2.3e-13  Score=116.61  Aligned_cols=168  Identities=13%  Similarity=0.106  Sum_probs=97.7

Q ss_pred             EEEEeeCCCCCCCcceEeEEEEEEecCccceeEe---ecCcceEEEcC--CCCCceEEEEEEEEeccCcCcccc-eEEeC
Q psy8774          10 IELVWSQPTQTYGEILGYRVKYGVREHTLKENLV---NSKNMSFLITN--LERGVEYEFRIAGQNHIGYGQETV-RYYTT   83 (427)
Q Consensus        10 v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~~--L~p~t~Y~~~V~a~~~~g~~~~~~-~~~~t   83 (427)
                      ..|+|+++....+.+..|.|+|+..+...|....   ....+.|.|++  +.+...|.+||+|.++.+.|..+. ..+..
T Consensus        23 ~iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~A~~~~~~S~ws~~~~f~~  102 (211)
T 3g9v_A           23 NILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTP  102 (211)
T ss_dssp             EEEEEECCCC---CCCEEEEEEEETTCSSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEEEEETTEECCCEECCCBCH
T ss_pred             eEEEECCCCCCCCCCeEEEEEEEECCCCceEECccCCCCCCCEECCCCcccccCccEEEEEEEECCCCcCCCEecCcccc
Confidence            4599999875444577899999987666787442   56677888875  578999999999999888887642 22333


Q ss_pred             CCCCCCCCCeeeEEEeecCCEEEEEeeCCCCC--CCCcc--------eeEEEEEEEEccCCCceEEEeeeeeEEEEccCC
Q psy8774          84 PEGPPTGPPANISHHFQTPDVVCITWDPPLRT--HRNGQ--------IVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLE  153 (427)
Q Consensus        84 ~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~--~~~~~--------i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~  153 (427)
                      ......+|| .+.+...+ .+|.|.|.+|...  +.+|.        ...|.|.|...+............+.+.|.+|.
T Consensus       103 ~~~t~i~PP-~v~v~~~~-~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~~~~~~~~~i~~L~  180 (211)
T 3g9v_A          103 WWETKIDPP-VMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEGAHRAVEIEALT  180 (211)
T ss_dssp             HHHCBCCCC-EEECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC------CEEEEEESSCCCC-----
T ss_pred             cccCccCCC-EEEEEEcC-CEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCccEEEEEecCCcEEEEecCC
Confidence            223344567 47776654 5899999999531  12332        357999998764333222333457888999999


Q ss_pred             CCcEEEEEEEEeeC--CCCCCCCCCeEE
Q psy8774         154 EGIEYSAEVQAITK--AGPGPWSPKLSL  179 (427)
Q Consensus       154 p~t~Y~~~V~a~~~--~g~~~~s~~~~~  179 (427)
                      |++.|.|+|+|...  ...|.+|.....
T Consensus       181 p~t~Ycv~V~a~~~~~~~~s~~S~~~C~  208 (211)
T 3g9v_A          181 PHSSYCVVAEIYQPMLDRRSQRSEERCV  208 (211)
T ss_dssp             -----CEEEEEEETTTTEECCCCCC---
T ss_pred             CCCeEEEEEEEEeCCCCCcCCCCCCEeE
Confidence            99999999999853  223556655544

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.44  E-value=3.9e-13  Score=102.77  Aligned_cols=98  Identities=16%  Similarity=0.170  Sum_probs=78.2

Q ss_pred             cccccCCCCCceEE-EeeeCcEEEEEeeeCCCC-CCceeEEEEEEEecccccccccccccccccccccceeEEeeecccc
Q psy8774         181 TARDMVRAPLGVKA-LATSDQSVEVWWKPVPAG-RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVE  258 (427)
Q Consensus       181 t~~~~p~~p~~l~~-~~~~~~si~v~W~~p~~~-~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (427)
                      |...+|.+|.++.+ ...+.+++.|+|++|... ++.+.+|.|+|+...   ...|                        
T Consensus         4 t~~~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~---~~~~------------------------   56 (110)
T 2crz_A            4 GSSGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIE---KDEP------------------------   56 (110)
T ss_dssp             SCCCCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTT---SCCC------------------------
T ss_pred             CcCCCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCC---CCce------------------------
Confidence            34567889999998 567889999999888644 467999999998652   2233                        


Q ss_pred             ccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         259 DLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       259 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                           ........++++|.+|.+++.|.|+|+|.|..|.|.+|..+.+.|.+
T Consensus        57 -----~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~  103 (110)
T 2crz_A           57 -----REVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP  103 (110)
T ss_dssp             -----EEEEEESCSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred             -----EEEEeCCcEEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCC
Confidence                 22234557789999999999999999999999999999999888843

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.44  E-value=4.1e-13  Score=104.26  Aligned_cols=103  Identities=21%  Similarity=0.306  Sum_probs=81.0

Q ss_pred             CcCccc-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce--EEEeeeeeEEE
Q psy8774          72 GYGQET-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--IHRNTTQTKAV  148 (427)
Q Consensus        72 g~~~~~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~  148 (427)
                      |.|+.+ ...+.|.+.+| .+|.++++...+.+++.|+|.+|.  ..+|.+.+|.|+|+..+.....  .......+.+.
T Consensus         1 G~g~~S~~~~~~T~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~   77 (119)
T 1wfn_A            1 GSSGSSGPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQEPG--EKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYR   77 (119)
T ss_dssp             CCCCCSCCCSCCSSCCSC-CCCSCCEEESCCSSEEEEECCCCT--TCCSCCCEEEEEEEESSCGGGCCCEEECSSCCEEE
T ss_pred             CCCCCCCCEEEECCCCCC-CCCCceEEEECCCCEEEEEEcCCC--CCCCcEEEEEEEEEECCCCCceEEEEeCCCceEEE
Confidence            445544 35567777766 457899999999999999999984  6778899999999987432222  23335688999


Q ss_pred             EccCCCCcEEEEEEEEeeCCCCCCCCCCe
Q psy8774         149 FSNLEEGIEYSAEVQAITKAGPGPWSPKL  177 (427)
Q Consensus       149 i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~  177 (427)
                      |.+|.|++.|.|+|+|.|..|.|.+|..+
T Consensus        78 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~  106 (119)
T 1wfn_A           78 VTGLTALTTYTIEVAAMTSKGQGQVSAST  106 (119)
T ss_dssp             EESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred             EcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence            99999999999999999999999877766

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.44  E-value=2.4e-13  Score=104.87  Aligned_cols=106  Identities=19%  Similarity=0.237  Sum_probs=83.5

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ..|.+|.+|++..++.+++.|+|.+|.   +.+.+|+|.|+..+..   ..                             
T Consensus         6 t~p~~P~~l~~~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~---~~-----------------------------   50 (115)
T 2cuh_A            6 SGPDGPTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAP---PL-----------------------------   50 (115)
T ss_dssp             CCCSSCEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSSC---CE-----------------------------
T ss_pred             cCCCCCcceEEEeccCCeEEEEEECCC---CCccEEEEEEEcCCCC---cE-----------------------------
Confidence            356889999999999999999999886   6789999999865211   11                             


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCcceEEeecCCCe
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHS  326 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~~l~~~~~~~~~  326 (427)
                      ........++++|.+|.|++.|.|+|+|++..|.+..+. +.++| ...+|.+|++..++.++
T Consensus        51 ~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~~~~s~~~~-~~~~T-~~~~P~~l~~~~vt~~s  111 (115)
T 2cuh_A           51 QAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNLTSPAS-ITFTT-GLEAPRDLEAKEVTPSG  111 (115)
T ss_dssp             EEEEETTCSEEEECSCCSSSEEEEEEEEEETTEECCCEE-EEEES-CCCCTTTSSSCCCCCCC
T ss_pred             EEEECCCccEEEEeCCCCCCEEEEEEEEEeCCCcCCCEE-EEEEe-CCCCCCCcEEEEecCCc
Confidence            112345678999999999999999999999888776654 56666 45688999988876654

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.44  E-value=1.4e-13  Score=103.95  Aligned_cols=94  Identities=21%  Similarity=0.365  Sum_probs=77.8

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeC--CCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPV--PAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p--~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      .+|.+|.++++...+.+++.|+|++|  ...+|.+.+|.|+|+..+.   ..+                           
T Consensus         7 ~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~---~~~---------------------------   56 (103)
T 2edy_A            7 GPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINS---QQE---------------------------   56 (103)
T ss_dssp             CCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTS---CCE---------------------------
T ss_pred             CCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCC---Ccc---------------------------
Confidence            45678999999999999999999999  4457899999999987632   111                           


Q ss_pred             cccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       262 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                         .......+++.|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.|
T Consensus        57 ---~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p  102 (103)
T 2edy_A           57 ---LQNITTDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP  102 (103)
T ss_dssp             ---EEEEESSSCCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred             ---EEEcCCcceEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence               1223457789999999999999999999999999999999888854

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.43  E-value=5.9e-13  Score=101.58  Aligned_cols=98  Identities=13%  Similarity=0.086  Sum_probs=78.0

Q ss_pred             ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         182 ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       182 ~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      ...+|.+|..+++...+.+++.|+|.+|...++ .+.+|.|+|+.....  ..|                          
T Consensus         4 ~~~~P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~--~~~--------------------------   55 (109)
T 1x5x_A            4 GSSGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSG--YGF--------------------------   55 (109)
T ss_dssp             CCCCCCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSS--CCC--------------------------
T ss_pred             CCCCCcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCC--cce--------------------------
Confidence            345667788888889999999999999986666 789999999875221  122                          


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                         ........+++++.+|.+++.|.|+|+|.|..|.|.+|..+.+.|.+
T Consensus        56 ---~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~  102 (109)
T 1x5x_A           56 ---KPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP  102 (109)
T ss_dssp             ---EEEEEESCSEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred             ---EEeEeCCccEEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCC
Confidence               22223446789999999999999999999999999999988888854

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=2e-13  Score=104.28  Aligned_cols=97  Identities=18%  Similarity=0.220  Sum_probs=74.4

Q ss_pred             CCCC-CceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         186 VRAP-LGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       186 p~~p-~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      |.+| .++.....+.+++.|+|++|...++.+.+|.|+|+....   ..|                             .
T Consensus        10 P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~---~~~-----------------------------~   57 (110)
T 2db8_A           10 PATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNG---GQF-----------------------------R   57 (110)
T ss_dssp             CCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSS---SCC-----------------------------E
T ss_pred             CCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCC---Cce-----------------------------E
Confidence            3344 344445567899999999998666789999999987521   233                             2


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                      .......++++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.+..+|
T Consensus        58 ~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~~  107 (110)
T 2db8_A           58 EVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSGP  107 (110)
T ss_dssp             EEEEESCSCEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCCS
T ss_pred             EEEeCCcCEEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCCC
Confidence            22334667899999999999999999999999999999999988654443

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.43  E-value=1.7e-12  Score=101.96  Aligned_cols=104  Identities=21%  Similarity=0.284  Sum_probs=80.3

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCC-CceEEEe---eeeeEEEEccCCCCcEEEEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDA-NNVIHRN---TTQTKAVFSNLEEGIEYSAEVQ  163 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~-~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~  163 (427)
                      ++.+|.++.+...+.+++.|+|.++  .+.++.+.+|.|+|+..... ..+....   ...+. .+.+|.|++.|.|+|+
T Consensus        16 ~P~~P~~~~~~~~~~~sv~l~W~p~--~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~-~i~~L~p~t~Y~frV~   92 (127)
T 1uey_A           16 VPNPPFDLELTDQLDKSVQLSWTPG--DDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTT-AQLNLSPYVNYSFRVM   92 (127)
T ss_dssp             SCCCCEEEEEECCSSSCEEEEEECC--CCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCE-EEECCCTTCEECCEEE
T ss_pred             CCcCCCCcEEEEccCCEEEEEEECC--CCCCCCceEEEEEEEECCCCCCccEEEeeeCCCceE-EEecCCCCCEEEEEEE
Confidence            4467999999999999999999987  46677899999999876322 2332222   23444 5779999999999999


Q ss_pred             EeeCCCCCCCCCC-eEEEcccccC-CCCCceEE
Q psy8774         164 AITKAGPGPWSPK-LSLMTARDMV-RAPLGVKA  194 (427)
Q Consensus       164 a~~~~g~~~~s~~-~~~~t~~~~p-~~p~~l~~  194 (427)
                      |.|..|.|.+|.. ..++|...+| .+|.++.+
T Consensus        93 A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~  125 (127)
T 1uey_A           93 AVNSIGKSLPSEASEQYLTKASEPDKNPTSGPS  125 (127)
T ss_dssp             EEESSCBCCCCSCCCCEECCCSSCSSCSSCCCC
T ss_pred             EEeCCccCCccccccceEcCCCCCCCCCceeEe
Confidence            9999999999888 4788866666 45777754

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=1.2e-12  Score=99.95  Aligned_cols=94  Identities=16%  Similarity=0.199  Sum_probs=74.7

Q ss_pred             ccccCCCCCceEEEeeeCcEEEEEeeeCCCCC-CceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         182 ARDMVRAPLGVKALATSDQSVEVWWKPVPAGR-GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       182 ~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~-g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      ..++|.+|.++++...+.+++.|+|++|...+ ..+.+|.|+|+...   ...|                          
T Consensus         4 ~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~---~~~w--------------------------   54 (110)
T 2yuw_A            4 GSSGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEG---TEDW--------------------------   54 (110)
T ss_dssp             CCCCSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETT---CSSE--------------------------
T ss_pred             CCCCCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECC---Cccc--------------------------
Confidence            35678999999999999999999999988544 47999999998762   2233                          


Q ss_pred             cccccc--ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEe
Q psy8774         261 DEWSQK--SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK  307 (427)
Q Consensus       261 ~~~~~~--~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~  307 (427)
                         ...  .....+++++.+|.+++.|.|+|+|.|..|.|.+|......
T Consensus        55 ---~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v  100 (110)
T 2yuw_A           55 ---IVANKDLIDKTKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPI  100 (110)
T ss_dssp             ---EECCSSCCCSSEEEECSCCTTCEEEEEEEEEETTEECCCEECSSCE
T ss_pred             ---eEeccccCccCEEEECCCCCCCEEEEEEEEEcCCcCCCCcCCCCCE
Confidence               111  12356789999999999999999999999999998765433

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1

Probab=99.43  E-value=3.1e-12  Score=96.79  Aligned_cols=93  Identities=15%  Similarity=0.226  Sum_probs=74.9

Q ss_pred             CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcc-eeEEEEEEEEccCCCceEE--Ee----eeeeEEEEccCCCCcE
Q psy8774          85 EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ-IVLYNVKFHKKIDANNVIH--RN----TTQTKAVFSNLEEGIE  157 (427)
Q Consensus        85 ~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~-i~~Y~v~~~~~~~~~~~~~--~~----~~~~~~~i~~L~p~t~  157 (427)
                      +++|.. |.++.+...+.+ +.|+|++|  ...+|. |.+|.|+|+..... .+..  ..    ...+++.|.+|.|++.
T Consensus         4 ~~~P~~-P~~~~~~~~~~~-v~l~W~~P--~~~~G~pi~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~t~   78 (105)
T 2haz_A            4 MDTPSS-PSIDQVEPYSST-AQVQFDEP--EATGGVPILKYKAEWRAVGEE-VWHSKWYDAKEASMEGIVTIVGLKPETT   78 (105)
T ss_dssp             CCCCCC-CEEEEEEECSSC-EEEEEECC--SCCTTSCCCEEEEEEEETTCC-CCEEEEEEHHHHHHHSEEEECSCCTTCE
T ss_pred             CCCCcC-CCCCEEEEcCCc-EEEEEcCC--cccCCccccEEEEEEEECCCC-CCccceEEccccCCccEEEECCCCCCCE
Confidence            455655 889998888887 99999999  456666 99999999987432 1211  11    2468999999999999


Q ss_pred             EEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         158 YSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       158 Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      |.|+|+|.|..|.|++|....++|.
T Consensus        79 Y~~rV~A~n~~G~g~~S~~~~~~T~  103 (105)
T 2haz_A           79 YAVRLAALNGKGLGEISAASEFKTQ  103 (105)
T ss_dssp             EEEEEEEEETTEECCCCCCEEEECC
T ss_pred             EEEEEEEEcCCccCCCcCCEeeEEe
Confidence            9999999999999999999999873

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.42  E-value=8.6e-13  Score=102.05  Aligned_cols=99  Identities=19%  Similarity=0.176  Sum_probs=79.0

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE--eeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--NTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      ++.+|.++++...+.+++.|+|.++.  +.++.+.+|.|+|+.......+...  ....+.+.+.+|.|++.|.|+|+|.
T Consensus        15 ~P~~P~~~~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~   92 (117)
T 1uem_A           15 LPGPPSKPQVTDVTKNSVTLSWQPGT--PGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAI   92 (117)
T ss_dssp             SCBCCCCCEEEEECSSCEEEECCCCB--CSSSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEEEEEEE
T ss_pred             CccCCCCCEEEEecCCEEEEEEeCCC--CCCcCceEEEEEEEECCCCCceeEcccccCcCEEEECCCCCCCEEEEEEEEE
Confidence            44678899999999999999999984  5667899999999886322333332  3457899999999999999999999


Q ss_pred             eCCCCCCCCCCeE-EEcccccCCC
Q psy8774         166 TKAGPGPWSPKLS-LMTARDMVRA  188 (427)
Q Consensus       166 ~~~g~~~~s~~~~-~~t~~~~p~~  188 (427)
                      |..|.|.+|.... ++|...+|.+
T Consensus        93 n~~G~s~~S~~~~~v~t~~~~P~~  116 (117)
T 1uem_A           93 NPQGLSDPSPMSDPVRTQDSGPSS  116 (117)
T ss_dssp             ETTEEEEECCCCCCEECCCSSCCC
T ss_pred             CCCccCCCcCCCccEEccCCCCCC
Confidence            9999988887776 7776665544

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.42  E-value=1.1e-12  Score=100.41  Aligned_cols=95  Identities=16%  Similarity=0.231  Sum_probs=74.5

Q ss_pred             ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         182 ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       182 ~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      ..++|.+|.++++...+.+++.|+|.+|...++ .+.+|.|+|+....   ..|..                        
T Consensus         5 p~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~---~~w~~------------------------   57 (111)
T 1x5y_A            5 SSGPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGS---EEWVP------------------------   57 (111)
T ss_dssp             CCSCCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTC---CCCEE------------------------
T ss_pred             CCCCCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCC---CceEE------------------------
Confidence            456789999999999999999999999986555 49999999987632   23310                        


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEE
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV  306 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~  306 (427)
                         ........+++++.+|.+++.|.|+|+|.|..|.|.+|.....
T Consensus        58 ---~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~  100 (111)
T 1x5y_A           58 ---ANKEPVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATLLQP  100 (111)
T ss_dssp             ---SSSSCBSSSEEEEECCCTTCCEEEEEEEEETTEECCCCCCSSC
T ss_pred             ---ccccCCcccEEEECCCCCCCEEEEEEEEEcCCcCCCCccCCCC
Confidence               0011234678999999999999999999999999998876533

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=4.9e-13  Score=102.12  Aligned_cols=97  Identities=19%  Similarity=0.262  Sum_probs=74.2

Q ss_pred             CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-eeeeeEEEEccCCCCcEEEEEEEE
Q psy8774          86 GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-NTTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        86 ~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      .+|..|+.++.....+.+++.|+|+++.  +.++.+.+|.|+|+.... ..+... ....+++.|.+|.|++.|.|+|+|
T Consensus         8 ~~P~~P~~~~~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A   84 (110)
T 2db8_A            8 PVPATPILQLEECCTHNNSATLSWKQPP--LSTVPADGYILELDDGNG-GQFREVYVGKETMCTVDGLHFNSTYNARVKA   84 (110)
T ss_dssp             CCCCCCBCCCCCCSCSSSEEEECCBCCT--TCCSCCSEEEEEECCSSS-SCCEEEEEESCSCEEEECCCSSSCCEEEEEE
T ss_pred             CCCCCccccceeeccCCCEEEEEECCCC--CCCCCccEEEEEEEeCCC-CceEEEEeCCcCEEEECCCCCCCEEEEEEEE
Confidence            3454444455444567899999999994  444789999999987632 233332 345788999999999999999999


Q ss_pred             eeCCCCCCCCCCeEEEccccc
Q psy8774         165 ITKAGPGPWSPKLSLMTARDM  185 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~~t~~~~  185 (427)
                      .|..|.|.+|..+.++|...+
T Consensus        85 ~n~~G~s~~S~~~~~~T~~~p  105 (110)
T 2db8_A           85 FNKTGVSPYSKTLVLQTSEGS  105 (110)
T ss_dssp             ECSSCBCCCCSCEECCCCCCC
T ss_pred             EeCCcCCCCCCCEEEEcCCCC
Confidence            999999999999998885543

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.42  E-value=8.5e-13  Score=103.73  Aligned_cols=106  Identities=17%  Similarity=0.138  Sum_probs=83.6

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCC-CCC----cc--eeEEEEEEEEccCCCceE-EEeeeeeEEEEccCCCCcEEEEEEE
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRT-HRN----GQ--IVLYNVKFHKKIDANNVI-HRNTTQTKAVFSNLEEGIEYSAEVQ  163 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~-~~~----~~--i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~  163 (427)
                      ...+++..++.+++.|+|.+|... ...    +.  +..|.|.|...+...... ......+++.|.+|.|++.|.|+|+
T Consensus        21 v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~~~g~~ts~~v~~L~P~T~Y~~rV~  100 (137)
T 1wk0_A           21 IVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKVQ  100 (137)
T ss_dssp             CCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEEEEESCSEEEECSCCTTCEECEEEE
T ss_pred             CCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEEEecCccEEEEcCCCCCCEEEEEEE
Confidence            446678889999999999998633 111    23  579999997653333332 3346689999999999999999999


Q ss_pred             EeeCCCCCCCCCCeEEEcccccCCCCCceEEEee
Q psy8774         164 AITKAGPGPWSPKLSLMTARDMVRAPLGVKALAT  197 (427)
Q Consensus       164 a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~  197 (427)
                      |.|..|.|++|..+.|+|....|.+|..+++...
T Consensus       101 A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l~~~  134 (137)
T 1wk0_A          101 AEYNSIKGTPSEAEIFTTLSCEPDIPNPPRISGP  134 (137)
T ss_dssp             EEETTEECCCCCCCCEECCCSSSCCCSCSCCCSC
T ss_pred             EEeCCCcCCCCCCEEEECCCCCCCCCCCCEEeCC
Confidence            9999999999999999998888888888777554

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.41  E-value=1.2e-12  Score=99.47  Aligned_cols=86  Identities=30%  Similarity=0.544  Sum_probs=74.1

Q ss_pred             CccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEe
Q psy8774           4 EEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYT   82 (427)
Q Consensus         4 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~   82 (427)
                      ..++++|.|+|++|.+.++.+.+|.|+|+..+...|.... ....+++.|.+|.|++.|.|+|+|.|..|.|..+...+.
T Consensus        17 ~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~   96 (107)
T 2dn7_A           17 TTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKEIR   96 (107)
T ss_dssp             ECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             ecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEEeCCCccEEEeCCCCCCCEEEEEEEEEcCCcccCCeeeEEe
Confidence            4577899999999987788999999999987776676554 677889999999999999999999999999988877888


Q ss_pred             CCCCCCC
Q psy8774          83 TPEGPPT   89 (427)
Q Consensus        83 t~~~~p~   89 (427)
                      |.+..|.
T Consensus        97 T~~~~P~  103 (107)
T 2dn7_A           97 TPEDLSG  103 (107)
T ss_dssp             CCCCCCC
T ss_pred             CCCCCCC
Confidence            8777664

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.41  E-value=2.6e-12  Score=97.12  Aligned_cols=98  Identities=20%  Similarity=0.207  Sum_probs=74.7

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      ++.+|.+|++...+.+++.|+|++|.     +.+.+|.|+|+..++...........+++.|.+|.|++.|.|+|+|.|.
T Consensus         7 ~p~~P~~l~v~~~~~~sv~lsW~~p~-----~~i~~Y~i~y~~~~~~~~~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~   81 (105)
T 2cum_A            7 GLEAPRDLEAKEVTPRTALLTWTEPP-----VRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWG   81 (105)
T ss_dssp             TCCCCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEECTTSCEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBT
T ss_pred             CCCCCCceEEEeccCCEEEEEEcCCC-----CccceEEEEEEeCCCceEEEEECCCccEEEECCCCCCCEEEEEEEEEeC
Confidence            55679999999999999999999884     4788999999876321111222345889999999999999999999999


Q ss_pred             CCCCCCCCCeEEEcccccCCCCCc
Q psy8774         168 AGPGPWSPKLSLMTARDMVRAPLG  191 (427)
Q Consensus       168 ~g~~~~s~~~~~~t~~~~p~~p~~  191 (427)
                      .|.+. .....++|.......|.+
T Consensus        82 ~g~s~-~~~~~~~T~~~~~~~p~d  104 (105)
T 2cum_A           82 QSLLP-PVSTSFTTGGLRISGPSS  104 (105)
T ss_dssp             TBCCC-CEEEEEECCCSCCSCSSC
T ss_pred             CcccC-CEEEEEEeCCcCCCCCCC
Confidence            88874 345667775554445544

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}

Probab=99.41  E-value=1.1e-12  Score=100.01  Aligned_cols=83  Identities=22%  Similarity=0.371  Sum_probs=70.5

Q ss_pred             ccceEEEEEeeCCCCCCCcceEeEEEEEEecCcccee-Ee-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEe
Q psy8774           5 EPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKEN-LV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYT   82 (427)
Q Consensus         5 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~-~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~   82 (427)
                      .+.+++.|+|.++.+++++|.+|.|+|+..+...|.. .. +...+++.|.+|.|++.|+|+|.|.|..|.|.++...+.
T Consensus        19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G~s~pS~~~~~   98 (114)
T 2kbg_A           19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFS   98 (114)
T ss_dssp             CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEECTTSCEEEEEEEEC
T ss_pred             cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEEeCCcCcCCcCCEEE
Confidence            5789999999998888899999999999876555543 32 667889999999999999999999999999998887787


Q ss_pred             CCCCC
Q psy8774          83 TPEGP   87 (427)
Q Consensus        83 t~~~~   87 (427)
                      |...+
T Consensus        99 T~~~~  103 (114)
T 2kbg_A           99 MPPKP  103 (114)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            75543

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}

Probab=99.41  E-value=4.4e-12  Score=103.85  Aligned_cols=120  Identities=18%  Similarity=0.183  Sum_probs=90.1

Q ss_pred             CcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEe-CCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEE
Q psy8774          46 KNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYT-TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLY  124 (427)
Q Consensus        46 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~-t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y  124 (427)
                      .-+++.+.+++ |+.|.|.++...        ..... +.....+.||.+++...++.+++.|+|++|.  +.+| +.+|
T Consensus       116 ~vts~~vgdg~-g~~~~~~~~~k~--------v~i~~~tq~ev~p~Pp~NL~At~VT~tSVtLsW~aP~--~~~G-I~gY  183 (238)
T 2w1n_A          116 SVTNSSVGDGE-GLVHEIAGTEKT--------VNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPE--TTEG-LEGY  183 (238)
T ss_dssp             EEEEEEEECTT-SCEEECBCEEEE--------EEEECCCCCCCCCCCCEEEEEEEECSSCEEEEEECCS--CCTT-EEEE
T ss_pred             ceeeEEEecCC-CcEEEeecccee--------eeeccCCCCcCccCCCCceEEEEccCCeEEEEecCCC--CCCC-ceeE
Confidence            55678888888 888888775221        11111 2233334889999999999999999999994  5455 9999


Q ss_pred             EEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEc
Q psy8774         125 NVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       125 ~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t  181 (427)
                      +|++..    ..........+++++.+|+++|.|.|+|.|.+.+|.+...+.+.++|
T Consensus       184 ~ly~~g----~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrT  236 (238)
T 2w1n_A          184 ILYKDG----KKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRT  236 (238)
T ss_dssp             EEEETT----EEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEEC
T ss_pred             EEEeCC----ceeEEeeccceEEEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEe
Confidence            998653    22233445578999999999999999999999999986667777776

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.40  E-value=4.7e-13  Score=101.01  Aligned_cols=91  Identities=19%  Similarity=0.201  Sum_probs=75.4

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe----eeeeEEEEccCCCCcEEEEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN----TTQTKAVFSNLEEGIEYSAEVQ  163 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~~~V~  163 (427)
                      |+.+|.++.+.. ..+++.|+|.+|.  +.++.|.+|.|+|+..  ...|....    ...+++.+.+|.+++.|.|||.
T Consensus         7 p~~pP~~l~v~~-~~~sv~L~W~pP~--~~~~~I~gY~vey~~~--~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~   81 (108)
T 1v5j_A            7 GLSPPRGLVAVR-TPRGVLLHWDPPE--LVPKRLDGYVLEGRQG--SQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLV   81 (108)
T ss_dssp             CCCCCEEEEEEE-CSSSEEEEEECCS--CCSSCCCBEEEEEEET--TCCCEEEEEEECSSCCEEECCCCCTTSCEECCBE
T ss_pred             CCCCCcceEEEE-eCCEEEEEECCCC--CCCCCCcEEEEEEEeC--CCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEE
Confidence            347899999875 5678999999995  5678999999999984  34444322    4578999999999999999999


Q ss_pred             EeeCCCCCCCCCCeEEEccc
Q psy8774         164 AITKAGPGPWSPKLSLMTAR  183 (427)
Q Consensus       164 a~~~~g~~~~s~~~~~~t~~  183 (427)
                      |+|..|.|.+|+.+.+.|..
T Consensus        82 A~n~~G~s~pS~~~~v~T~~  101 (108)
T 1v5j_A           82 AFAGSFVSDPSNTANVSTSG  101 (108)
T ss_dssp             EEETTEEEEECSCCCCCCSS
T ss_pred             EEcCCCCcCCCCCEEEEeCC
Confidence            99999999999999988843

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.3e-12  Score=101.25  Aligned_cols=104  Identities=16%  Similarity=0.211  Sum_probs=78.3

Q ss_pred             ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCC
Q psy8774          78 VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEG  155 (427)
Q Consensus        78 ~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~  155 (427)
                      ...+.|.+.+| .+|.++++...+.+++.|+|++|.  .. |.+.+|.|+|+............  ...+.+.|.+|.|+
T Consensus         8 ~~~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~--~~-g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~   83 (118)
T 2yrz_A            8 SHDSRLTAGVP-DTPTRLVFSALGPTSLRVSWQEPR--CE-RPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPN   83 (118)
T ss_dssp             CCTTSSSCSCC-CCCCCCEECCCBTTEEEEECCCCC--CS-SCEEEEEEEEEBSSSCCEEEEEESCTTCCEEEEESCCTT
T ss_pred             cceeecCCCCC-CCCCceEEEeCCCCEEEEEeCCCC--CC-CCccEEEEEEEECCCCceEEEEcCCCCcCEEEeCCCCCC
Confidence            44566777766 568899999999999999999985  22 68999999999864322222222  34789999999999


Q ss_pred             cEEEEEEEEeeCCCCCCCCC-CeEEEccccc
Q psy8774         156 IEYSAEVQAITKAGPGPWSP-KLSLMTARDM  185 (427)
Q Consensus       156 t~Y~~~V~a~~~~g~~~~s~-~~~~~t~~~~  185 (427)
                      +.|.|+|+|.|..|.|.+|. .+.+.+...+
T Consensus        84 t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~~~  114 (118)
T 2yrz_A           84 HSYVFRVRAQSQEGWGREREGVITIESQVSG  114 (118)
T ss_dssp             CEEEEEEEEEESSCEEEEEEEEEECCCSCCC
T ss_pred             CEEEEEEEEEcCCcCCCCcCCceEeCCCCCC
Confidence            99999999999999998776 3444443333

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}

Probab=99.40  E-value=5e-12  Score=95.15  Aligned_cols=90  Identities=20%  Similarity=0.335  Sum_probs=73.0

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce--EEEeeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--IHRNTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      .+.+|.+|++...+.+++.|+|.+|.  ..++.+.+|.|.|.........  .......+++.|.+|.|++.|.|+|+|.
T Consensus         7 ~~~~P~~l~v~~~t~~Sv~lsW~~p~--~~~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~   84 (103)
T 3t04_D            7 VSSVPTKLEVVDATPTSLKISWDAYY--SSWQNVKYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAY   84 (103)
T ss_dssp             CCCCCCSCEEEEEETTEEEEECTTTT--TTSCCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEE
T ss_pred             cCCCCceeEEEecCCCEEEEEccCCC--CCCCccceEEEEEEECCCCCccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence            44678999999999999999999984  4678999999999987432222  2333558999999999999999999999


Q ss_pred             eC--CCCCCCCCCeEEE
Q psy8774         166 TK--AGPGPWSPKLSLM  180 (427)
Q Consensus       166 ~~--~g~~~~s~~~~~~  180 (427)
                      |.  .|.++ |.++.+.
T Consensus        85 ~~~~~G~~~-S~p~~~~  100 (103)
T 3t04_D           85 DTFFPGYEP-NSPISIN  100 (103)
T ss_dssp             SCCCTTCCC-SCCEEEE
T ss_pred             eCCCCCCCC-CCCEEEe
Confidence            99  88885 7776654

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.39  E-value=7.4e-12  Score=94.94  Aligned_cols=96  Identities=19%  Similarity=0.413  Sum_probs=75.2

Q ss_pred             eCCCCCCCCCCeeeEEEeecCCEEEEEe--eCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEE
Q psy8774          82 TTPEGPPTGPPANISHHFQTPDVVCITW--DPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYS  159 (427)
Q Consensus        82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W--~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~  159 (427)
                      .|.+.+| .+|.++++...+.++|.|+|  .+|  ...+|. .+|.|+|+..  .... ........+.|.+|.|++.|.
T Consensus         4 ~T~~~~P-~~p~~l~~~~~~~~sv~l~W~~~~P--~~~ng~-~~Y~v~y~~~--~~~~-~~~~~~~~~~i~~L~p~t~Y~   76 (107)
T 1x5a_A            4 GSSGAES-LSGLSLKLVKKEPRQLELTWAGSRP--RNPGGN-LSYELHVLNQ--DEEW-HQMVLEPRVLLTKLQPDTTYI   76 (107)
T ss_dssp             TTTTCCC-CCSCCCCEEEEETTEEEEECCCCCS--SCCSSC-CEEEEEEECS--SCEE-EEEESSSEEEEESCCSSCEEE
T ss_pred             cCCCCCC-CCCCceEEEecCCCEEEEEECCCCC--CCCCCc-eEEEEEEEeC--CCCc-eEEEecceEEECCCCCCCEEE
Confidence            3555555 45779999999999999999  777  456677 8999999875  1111 112222339999999999999


Q ss_pred             EEEEEeeCCCCCCCCCCeEEEcccc
Q psy8774         160 AEVQAITKAGPGPWSPKLSLMTARD  184 (427)
Q Consensus       160 ~~V~a~~~~g~~~~s~~~~~~t~~~  184 (427)
                      |+|+|.|..|.|++|..+.++|..+
T Consensus        77 f~V~A~~~~G~g~~S~~~~~~T~~~  101 (107)
T 1x5a_A           77 VRVRTLTPLGPGPFSPDHEFRTSPP  101 (107)
T ss_dssp             EEEEEECSSSCCCCCCCEEEECCCC
T ss_pred             EEEEEECCCccCCCCCCEEEEECCC
Confidence            9999999999999999999998544

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.38  E-value=1.7e-12  Score=101.02  Aligned_cols=100  Identities=18%  Similarity=0.300  Sum_probs=77.2

Q ss_pred             ccCCCCCce--EEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccc
Q psy8774         184 DMVRAPLGV--KALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       184 ~~p~~p~~l--~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      .+|.+|.++  .+...+.+++.|+|.+|...++.+.+|.|+|+..+    ..|...                        
T Consensus        16 ~~P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~----~~~~~~------------------------   67 (121)
T 1wf5_A           16 QLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN----APWTVL------------------------   67 (121)
T ss_dssp             CCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT----CCCEEE------------------------
T ss_pred             eCCccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC----CCceEe------------------------
Confidence            467899999  88888899999999998655678999999998762    233100                        


Q ss_pred             cccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccce-EEeecCCCCC
Q psy8774         262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV-TVKVKPEDVP  314 (427)
Q Consensus       262 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~-~~~t~~~~~P  314 (427)
                        ........++++|.+|.|++.|.|+|+|.|..|.|.+|... .++| +..+|
T Consensus        68 --~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t-~~~~P  118 (121)
T 1wf5_A           68 --LASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSL-PESGP  118 (121)
T ss_dssp             --ESSCCTTCCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEEC-CCCSS
T ss_pred             --EcccCCCccEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEc-CCCCC
Confidence              01233456789999999999999999999999999999876 4555 44444

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.38  E-value=1.5e-12  Score=100.70  Aligned_cols=99  Identities=20%  Similarity=0.207  Sum_probs=78.5

Q ss_pred             cccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         181 TARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       181 t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      +..++|.+|.++++...+.+++.|+|.++...++.+.+|.|+|+...  ....|                          
T Consensus        11 ~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~--~~~~~--------------------------   62 (117)
T 1uem_A           11 DLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQS--VSNSW--------------------------   62 (117)
T ss_dssp             CSCCSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETT--TEEEE--------------------------
T ss_pred             CCCCCccCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECC--CCCce--------------------------
Confidence            35567889999999999999999999999856678999999998762  12222                          


Q ss_pred             cccccc-ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceE-EeecC
Q psy8774         261 DEWSQK-SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT-VKVKP  310 (427)
Q Consensus       261 ~~~~~~-~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~-~~t~~  310 (427)
                         ... .....+++++.+|.|++.|.|+|+|.|..|.|.+|.... ++|.+
T Consensus        63 ---~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~  111 (117)
T 1uem_A           63 ---QTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQD  111 (117)
T ss_dssp             ---EEEEEEECSSEEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCC
T ss_pred             ---eEcccccCcCEEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccC
Confidence               111 123567899999999999999999999999999888776 66643

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A

Probab=99.37  E-value=2.5e-12  Score=97.01  Aligned_cols=91  Identities=16%  Similarity=0.258  Sum_probs=72.3

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      .|.+|.+|++..++.+++.|+|.+|.   +.+.+|.|.|+......  .+.                            .
T Consensus         2 ~p~~P~~l~v~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~~--~~~----------------------------~   48 (104)
T 2rb8_A            2 RLDAPSQIEVKDVTDTTALITWMPPS---QPVDGFELTYGIKDVPG--DRT----------------------------T   48 (104)
T ss_dssp             CCCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEETTCTT--CCE----------------------------E
T ss_pred             CCCCCCccEEEEecCCeEEEEEcCCC---CccceEEEEEEECcCCC--ceE----------------------------E
Confidence            36889999999999999999999886   78999999998753111  110                            1


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                      .......++++|.+|+|++.|.|+|+|.+..|.|..+. ..++|.
T Consensus        49 ~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~-~~~~T~   92 (104)
T 2rb8_A           49 IDLTEDENQYSIGNLKPDTEYEVSLISRRGDMSSNPAK-ETFTTG   92 (104)
T ss_dssp             EEEETTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEECC
T ss_pred             EEcCCCcCEEEeCCCCCCCEEEEEEEEEeCCccCCCEE-EEEECC
Confidence            12345678999999999999999999999999887765 556664

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.3e-12  Score=96.69  Aligned_cols=90  Identities=14%  Similarity=0.235  Sum_probs=72.3

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc-eEEEeeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN-VIHRNTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      .|..+|.+|++...+.+++.|+|+++.     +.+.+|.|+|...++... ......+.+++.|.+|.|++.|.|+|.|+
T Consensus         6 ~p~~pP~~l~~~~vt~tsi~vsW~pp~-----~~i~~Y~I~y~~~~~~~~~~~~v~~~~t~~~l~~L~p~T~Y~v~V~A~   80 (108)
T 2ee3_A            6 SGLAPPRHLGFSDVSHDAARVFWEGAP-----RPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCL   80 (108)
T ss_dssp             CCCCCSSCEEEESCCSSCEEEEESCCS-----SCCSEEEEEEEETTTCCBCCEEEETTCCEEEECSCCSSCEEEEEEEEE
T ss_pred             cCCCCCceEEEEEccCCeEEEEeeCCC-----CCccEEEEEEEeCCCCceeEEEcCCCcCEEEcCCCCCCCEEEEEEEEE
Confidence            366789999999999999999999874     689999999998744332 22334457899999999999999999999


Q ss_pred             eCCCCCCCCCCeEEEcc
Q psy8774         166 TKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       166 ~~~g~~~~s~~~~~~t~  182 (427)
                      |..|.|+.+.. .++|.
T Consensus        81 ~~~g~s~p~~~-~~~T~   96 (108)
T 2ee3_A           81 YPGGGSSTLTG-RVTTK   96 (108)
T ss_dssp             CTTSCEEEEEE-EEECC
T ss_pred             eCCCcCCCccC-EEEeC
Confidence            99998865533 56665

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.37  E-value=4.6e-12  Score=98.57  Aligned_cols=97  Identities=13%  Similarity=0.208  Sum_probs=77.4

Q ss_pred             CCCCCeee--EEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccCCCCcEEEEE
Q psy8774          88 PTGPPANI--SHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNLEEGIEYSAE  161 (427)
Q Consensus        88 p~~~p~~~--~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~  161 (427)
                      ++.+|.++  .+...+.+++.|+|.++  .+.++.+.+|.|+|+..+  ..+...    ....+++.|.+|.|++.|.|+
T Consensus        17 ~P~~P~~~~~~~~~~~~~sv~l~W~~p--~~~~~~i~~Y~v~~~~~~--~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~fr   92 (121)
T 1wf5_A           17 LPHAPEHPVATLSTVERRAINLTWTKP--FDGNSPLIRYILEMSENN--APWTVLLASVDPKATSVTVKGLVPARSYQFR   92 (121)
T ss_dssp             CCCCCSSCEEEECSSSTTEEEEECCCC--CCCSSCEEEEEEEEECTT--CCCEEEESSCCTTCCEEEEESCCTTCEEEEE
T ss_pred             CCccCCCcceeeEeccCCEEEEEEcCC--CCCCCcceEEEEEEEcCC--CCceEeEcccCCCccEEEECCcCCCCEEEEE
Confidence            44678888  77888899999999988  456678999999999873  444332    235788999999999999999


Q ss_pred             EEEeeCCCCCCCCCCe-EEEcccccCCC
Q psy8774         162 VQAITKAGPGPWSPKL-SLMTARDMVRA  188 (427)
Q Consensus       162 V~a~~~~g~~~~s~~~-~~~t~~~~p~~  188 (427)
                      |+|.|..|.|.+|... .++|...+|..
T Consensus        93 V~A~n~~G~s~~S~~~~~~~t~~~~P~~  120 (121)
T 1wf5_A           93 LCAVNDVGKGQFSKDTERVSLPESGPSS  120 (121)
T ss_dssp             EEEEESSCEEEECCCCSCEECCCCSSCC
T ss_pred             EEEEcCCccCCCcCCcceeEcCCCCCCC
Confidence            9999999999888876 57776665543

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=4.3e-12  Score=95.77  Aligned_cols=96  Identities=17%  Similarity=0.217  Sum_probs=71.5

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      +|.+|.+|++...+.+++.|+|.+|.   + +.+|.|.|+..........                             .
T Consensus         8 ~~~~P~~l~~~~~~~~sv~lsW~~p~---~-~~~Y~v~y~~~~~~~~~~~-----------------------------~   54 (104)
T 2dkm_A            8 PLPPPRALTLAAVTPRTVHLTWQPSA---G-ATHYLVRCSPASPKGEEEE-----------------------------R   54 (104)
T ss_dssp             SCCCCCCCEEEEECSSEEEEECCCCS---S-CSEEEEEEEESSSCCSSCC-----------------------------E
T ss_pred             CCCCCceeEEEecCCCEEEEEEeCCC---C-CCeEEEEEEECCCCCCcce-----------------------------E
Confidence            56799999999999999999999887   3 4999999987632111111                             1


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCc
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPL  315 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~  315 (427)
                      ....... +++|.+|+|++.|.|+|+|++..|.|..+. +.+.|.|..+|.
T Consensus        55 ~~~~~~~-~~~l~~L~p~t~Y~~~V~A~~~~~~s~p~~-~~~~T~p~~~P~  103 (104)
T 2dkm_A           55 EVQVGRP-EVLLDGLEPGRDYEVSVQSLRGPEGSEARG-IRARTPTSGPSS  103 (104)
T ss_dssp             EEEESSS-EEEEESCCTTCCEEEEEEEECSSSBCCCEE-EECCCCCCSCCC
T ss_pred             EEecCCC-EEEECCCCCCCEEEEEEEEECCCCCCCCEE-EEEEcCCCCCCC
Confidence            1112222 899999999999999999999988777654 556676666664

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.36  E-value=1.9e-12  Score=99.70  Aligned_cols=96  Identities=16%  Similarity=0.169  Sum_probs=73.0

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCC---C-c-eeEEEEEEEecccccccccccccccccccccceeEEeeecccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGR---G-K-ILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVE  258 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~---g-~-i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (427)
                      .+|.+|..+.+..++.+++.|+|++|...+   + . |.+|.|+ ...  .....|                        
T Consensus        14 ~pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve-~~~--~~~~~~------------------------   66 (120)
T 1wfu_A           14 VPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIE-EED--PKMHSY------------------------   66 (120)
T ss_dssp             CCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEE-EEC--TTTCCE------------------------
T ss_pred             CCCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEE-Eec--CCCCce------------------------
Confidence            445566666677788999999999998653   3 3 8999999 332  122233                        


Q ss_pred             ccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCC
Q psy8774         259 DLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPE  311 (427)
Q Consensus       259 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~  311 (427)
                           ........+++++.+|+|++.|.|+|+|.|..|.|.+|..+.++|...
T Consensus        67 -----~~v~~~~~t~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~  114 (120)
T 1wfu_A           67 -----GVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE  114 (120)
T ss_dssp             -----EEEEEESCSEEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred             -----EEEecCCccEEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence                 333344467899999999999999999999999999999999998543

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A

Probab=99.36  E-value=4.9e-12  Score=94.84  Aligned_cols=82  Identities=16%  Similarity=0.217  Sum_probs=66.4

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      .+.+|.+|++...+.+++.|+|++|. .++.+.+|.|.|...+......                              .
T Consensus         4 ~~~~P~~l~v~~~t~~Sv~l~W~~p~-~~~~i~~Y~v~y~~~~~~~~~~------------------------------~   52 (101)
T 3k2m_C            4 VSSVPTKLEVVAATPTSLLISWDAPM-SSSSVYYYRITYGETGGNSPVQ------------------------------E   52 (101)
T ss_dssp             EEBSSCEEEEEEEETTEEEEEECCCC-TTSCCCEEEEEEEETTCSSCCE------------------------------E
T ss_pred             CCCCCcceEEeecCCCEEEEEecCCC-CCCceeeEEEEEEECCCCCccE------------------------------E
Confidence            45789999999999999999999987 5689999999999863211111                              1


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccCC
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNGL  297 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~  297 (427)
                      .......++++|.+|.|++.|.|+|+|.+..|.
T Consensus        53 ~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~~~~   85 (101)
T 3k2m_C           53 FTVPYSSSTATISGLSPGVDYTITVYAWGEDSA   85 (101)
T ss_dssp             EEEETTCCEEEECSCCTTCEEEEEEEEEEECTT
T ss_pred             EEcCCCccEEEECCCCCCCEEEEEEEEEeCCcc
Confidence            123456789999999999999999999999887

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.36  E-value=3.2e-12  Score=98.44  Aligned_cols=105  Identities=13%  Similarity=0.222  Sum_probs=80.1

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      .+.+|.+|++...+.+++.|+|.+|.     +.+.+|.|.|...+............+++.|.+|.|++.|.|+|+|.+.
T Consensus         7 ~p~~P~~l~~~~~t~~sv~lsW~~p~-----~~i~~Y~v~y~~~~~~~~~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~   81 (115)
T 2cuh_A            7 GPDGPTQLRALNLTEGFAVLHWKPPQ-----NPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRG   81 (115)
T ss_dssp             CCSSCEEEECCCCSSSCEEEEEECCS-----SCCSEEEEEEECSSSCCEEEEEETTCSEEEECSCCSSSEEEEEEEEEET
T ss_pred             CCCCCcceEEEeccCCeEEEEEECCC-----CCccEEEEEEEcCCCCcEEEEECCCccEEEEeCCCCCCEEEEEEEEEeC
Confidence            34578999999999999999999884     4688999999876332222333455899999999999999999999998


Q ss_pred             CCCCCCCCCeEEEcccccCCCCCceEEEeeeCcE
Q psy8774         168 AGPGPWSPKLSLMTARDMVRAPLGVKALATSDQS  201 (427)
Q Consensus       168 ~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~s  201 (427)
                      .|.+.. ....+.|.   +.+|.+|++..++.++
T Consensus        82 ~~~s~~-~~~~~~T~---~~~P~~l~~~~vt~~s  111 (115)
T 2cuh_A           82 PNLTSP-ASITFTTG---LEAPRDLEAKEVTPSG  111 (115)
T ss_dssp             TEECCC-EEEEEESC---CCCTTTSSSCCCCCCC
T ss_pred             CCcCCC-EEEEEEeC---CCCCCCcEEEEecCCc
Confidence            877643 34556654   4578888887776554

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.36  E-value=1.9e-12  Score=101.69  Aligned_cols=107  Identities=18%  Similarity=0.246  Sum_probs=81.9

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCC-CC------c--eeEEEEEEEecccccccccccccccccccccceeEEeee
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAG-RG------K--ILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTM  254 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~-~g------~--i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (427)
                      +.|.....+.+..++.+++.|+|.+|... +|      .  +..|+|.|......  ..+                    
T Consensus        16 ~~~s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~--~~~--------------------   73 (137)
T 1wk0_A           16 ALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKD--GKY--------------------   73 (137)
T ss_dssp             HHTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTT--SCC--------------------
T ss_pred             hccCCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCC--Cce--------------------
Confidence            45667778899999999999999998765 43      2  58999998664211  111                    


Q ss_pred             ccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC--CCCCcceEEee
Q psy8774         255 TAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP--EDVPLSLRAHD  321 (427)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~--~~~P~~l~~~~  321 (427)
                               .....+..++++|.+|+|++.|.|+|+|+|..|.|++|..+.|+|.+  +.+|.++++..
T Consensus        74 ---------~~~~~g~~ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l~~  133 (137)
T 1wk0_A           74 ---------KSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRISG  133 (137)
T ss_dssp             ---------EEEEEESCSEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCCCS
T ss_pred             ---------EEEEecCccEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEEeC
Confidence                     22334677899999999999999999999999999999999999853  33555555543

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1

Probab=99.35  E-value=1.1e-11  Score=94.78  Aligned_cols=90  Identities=20%  Similarity=0.261  Sum_probs=71.5

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEEEE
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAEVQ  163 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~  163 (427)
                      .++.+|.++++...+.+++.|+|.+|. .+.+..+.+|.|+|+.... ..+....   ...+++.+.+|.+++.|.|+|+
T Consensus         7 ~~P~~P~~l~~~~~~~~sv~l~W~~p~-~~~~~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~   84 (111)
T 1x5y_A            7 GPTSAPQHLTVEDVTDTTTTLKWRPPD-RIGAGGIDGYLVEYCLEGS-EEWVPANKEPVERCGFTVKDLPTGARILFRVV   84 (111)
T ss_dssp             SCCCCCEEEEEEEECSSEEEEEEECCS-CCCSSCCCEEEEEEEETTC-CCCEESSSSCBSSSEEEEECCCTTCCEEEEEE
T ss_pred             CCCcCCCCCEEEeccCCEEEEEECCCC-cCCCCcccEEEEEEEECCC-CceEEccccCCcccEEEECCCCCCCEEEEEEE
Confidence            355789999999999999999999985 2233359999999988632 3333322   3478899999999999999999


Q ss_pred             EeeCCCCCCCCCCeE
Q psy8774         164 AITKAGPGPWSPKLS  178 (427)
Q Consensus       164 a~~~~g~~~~s~~~~  178 (427)
                      |.|..|.|.+|....
T Consensus        85 A~n~~G~s~~S~~~~   99 (111)
T 1x5y_A           85 GVNIAGRSEPATLLQ   99 (111)
T ss_dssp             EEETTEECCCCCCSS
T ss_pred             EEcCCcCCCCccCCC
Confidence            999999998887653

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}

Probab=99.35  E-value=4.4e-12  Score=94.35  Aligned_cols=85  Identities=16%  Similarity=0.146  Sum_probs=68.5

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      .+.+|.+|++...+.+++.|+|++|.   +.+.+|+|.|+..+......                              .
T Consensus         4 ~~~~P~~l~v~~~t~~Si~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~------------------------------~   50 (97)
T 3qht_C            4 VSSVPTKLEVVAATPTSLLISWDASS---SSVSYYRITYGETGGNSPVQ------------------------------E   50 (97)
T ss_dssp             -CCSSSSCEEEEEETTEEEEECCCCC---SSCCEEEEEEEESSSCSCCE------------------------------E
T ss_pred             CCCCCCceEEEecCCCEEEEEEeCCC---CCCCEEEEEEEECCCCCccE------------------------------E
Confidence            46899999999999999999999886   78999999999863221011                              1


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                      .......++++|.+|.|++.|.|+|+|++..|.|+.+.
T Consensus        51 ~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~~~G~gp~ss   88 (97)
T 3qht_C           51 FTVPGSSSTATISGLSPGVDYTITVYAYYSYYDLYYSY   88 (97)
T ss_dssp             EEEETTCCEEEECSCCTTCEEEEEEEEEEEETTEEEEC
T ss_pred             EEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCccCCCCC
Confidence            22345678999999999999999999999999987553

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.35  E-value=1e-11  Score=94.72  Aligned_cols=94  Identities=19%  Similarity=0.247  Sum_probs=73.3

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      ++.+|.++++...+.+++.|+|.+|. .+.+..+.+|.|+|+... ...+....   ...+.+.+.+|.+++.|.|+|+|
T Consensus         7 ~P~~P~~l~~~~~~~~sv~l~W~~p~-~~g~~~i~~Y~v~~~~~~-~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A   84 (110)
T 2yuw_A            7 GTSPPTLLTVDSVTDTTVTMRWRPPD-HIGAAGLDGYVLEYCFEG-TEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKA   84 (110)
T ss_dssp             CSCCCEEEEEEEECSSCEEEEEECCS-SCCSSCEEEEEEEEEETT-CSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEE
T ss_pred             CCCCCCccEEEeccCCeEEEEECCCC-CCCCCCccEEEEEEEECC-CccceEeccccCccCEEEECCCCCCCEEEEEEEE
Confidence            45779999999999999999999985 233457899999999873 23333332   35789999999999999999999


Q ss_pred             eeCCCCCCCCCCeE-EEccc
Q psy8774         165 ITKAGPGPWSPKLS-LMTAR  183 (427)
Q Consensus       165 ~~~~g~~~~s~~~~-~~t~~  183 (427)
                      .|..|.|.+|.... +++..
T Consensus        85 ~n~~G~s~~S~~~~~v~~~~  104 (110)
T 2yuw_A           85 VNAAGASEPKYYSQPILVKE  104 (110)
T ss_dssp             EETTEECCCEECSSCEECCC
T ss_pred             EcCCcCCCCcCCCCCEEecC
Confidence            99999998876653 44433

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.35  E-value=5.8e-12  Score=95.20  Aligned_cols=90  Identities=16%  Similarity=0.109  Sum_probs=72.1

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      .+|.+|.+|++..++.+++.|+|++|.   +.+.+|.|.|+..++    .+.                            
T Consensus         6 t~p~~P~~l~v~~~~~~sv~lsW~~p~---~~i~~Y~i~y~~~~~----~~~----------------------------   50 (105)
T 2cum_A            6 SGLEAPRDLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGG----QTQ----------------------------   50 (105)
T ss_dssp             TTCCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEECTTS----CEE----------------------------
T ss_pred             cCCCCCCceEEEeccCCEEEEEEcCCC---CccceEEEEEEeCCC----ceE----------------------------
Confidence            357899999999999999999999887   689999999986532    110                            


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                      ........++++|.+|.|++.|.|+|+|++..|.|.... ..++|.
T Consensus        51 ~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~~~-~~~~T~   95 (105)
T 2cum_A           51 EILLPGGITSHQLLGLFPSTSYNARLQAMWGQSLLPPVS-TSFTTG   95 (105)
T ss_dssp             EEEECSSCSEEEECSCCTTCEEEEEEEEEBTTBCCCCEE-EEEECC
T ss_pred             EEEECCCccEEEECCCCCCCEEEEEEEEEeCCcccCCEE-EEEEeC
Confidence            112345678999999999999999999999998877654 667764

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1

Probab=99.35  E-value=8e-11  Score=103.31  Aligned_cols=183  Identities=14%  Similarity=0.155  Sum_probs=120.4

Q ss_pred             CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCC-Cce-EEE-----eeeeeEEEEcc--CCCCc
Q psy8774          86 GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDA-NNV-IHR-----NTTQTKAVFSN--LEEGI  156 (427)
Q Consensus        86 ~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~-~~~-~~~-----~~~~~~~~i~~--L~p~t  156 (427)
                      ++|..+|.++.+...+...+.++|++...    .....|.+.|...... ..+ .+.     ......+.+..  +..+.
T Consensus        34 g~~~~~~~nl~C~~~~~~~l~CtW~~g~~----~~~t~y~l~y~~~~~~~~~~~~C~~y~~~~g~~~~C~f~~~~~~~~~  109 (247)
T 2erj_C           34 SVSTLPLPEVQCFVFNVEYMNCTWQSSSE----PQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQ  109 (247)
T ss_dssp             ---CCCCCCCEEEEETTSEEEEECCTTSS----SSCCCCEEEEEESSSSCCCCEECCSEEESSSSEEEEEEEGGGCCTTS
T ss_pred             CCCCCCCCCCEEEECCCCEEEEEEcCCCC----CCCeeEEEEEEECCCCCCcceeCCCccccCCcceEEEeCCCCcceee
Confidence            34455688899998899999999998741    1235788887654211 111 111     12234666654  44567


Q ss_pred             EEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccc
Q psy8774         157 EYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWS  235 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~  235 (427)
                      .|.|.|.+  ..|.. .+....+.. ....|.||.+|++.......+.|+|++|..  .....|+|+|+..+   ...| 
T Consensus       110 ~y~i~V~~--~~g~~-~s~~~~~~~~~iVkP~PP~nl~v~~~~~~~l~l~W~~P~~--~~~L~Yevry~~~~---~~~W-  180 (247)
T 2erj_C          110 TFVVQLQD--PREPR-RQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL--NHCLEHLVQYRTDW---DHSW-  180 (247)
T ss_dssp             CEEEEEEC--SSCTT-CEEEEEECGGGSEECCCCEEEEEEESSSSCEEEEEECSSC--CTTEEEEEEEECSS---CSSC-
T ss_pred             EEEEEEEE--CCCcc-ccceEEEchhHeEEeCCCCeEEEEECCCCcEEEEECCCCC--CCcEEEEEEEeeCC---CCCC-
Confidence            78888864  23321 233444433 234589999999998877899999999863  24468999998752   2234 


Q ss_pred             cccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEecc-----C-CCCCccceEEeec
Q psy8774         236 QKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN-----G-LGRLSGKVTVKVK  309 (427)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~-----G-~g~~s~~~~~~t~  309 (427)
                                                  ........+++.|.+|.|++.|.|+|||....     | .|.+|.++.+.+.
T Consensus       181 ----------------------------~~~~~~~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~  232 (247)
T 2erj_C          181 ----------------------------TEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN  232 (247)
T ss_dssp             ----------------------------EEEEECSSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC-
T ss_pred             ----------------------------EEEecCCceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECC
Confidence                                        32333456789999999999999999999853     3 6777787887774

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A

Probab=99.34  E-value=1.3e-11  Score=93.07  Aligned_cols=97  Identities=15%  Similarity=0.150  Sum_probs=71.1

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      +.+|.+|++...+.+++.|+|.+|.     +.+.+|.|.|+.........  ......+++.|.+|.|++.|.|+|+|.+
T Consensus         3 p~~P~~l~v~~~t~~sv~lsW~~p~-----~~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~   77 (104)
T 2rb8_A            3 LDAPSQIEVKDVTDTTALITWMPPS-----QPVDGFELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRR   77 (104)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEETTCTTCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCCCccEEEEecCCeEEEEEcCCC-----CccceEEEEEEECcCCCceEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence            4679999999999999999999884     67899999998763222232  2345588999999999999999999999


Q ss_pred             CCCCCCCCCCeEEEcccccCCCCCc
Q psy8774         167 KAGPGPWSPKLSLMTARDMVRAPLG  191 (427)
Q Consensus       167 ~~g~~~~s~~~~~~t~~~~p~~p~~  191 (427)
                      ..|.|.. ....++|....|..|.+
T Consensus        78 ~~g~s~p-~~~~~~T~~~~~~~~~~  101 (104)
T 2rb8_A           78 GDMSSNP-AKETFTTGLAAALEHHH  101 (104)
T ss_dssp             TTEECCC-EEEEEECCC--------
T ss_pred             CCccCCC-EEEEEECCCCccccccc
Confidence            9998744 34557776655555543

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.34  E-value=4.4e-12  Score=97.84  Aligned_cols=93  Identities=26%  Similarity=0.346  Sum_probs=70.6

Q ss_pred             EEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccc-cccccccccccccccccceeEEeeeccccccccccccccCCC
Q psy8774         193 KALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVE-DLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLT  271 (427)
Q Consensus       193 ~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (427)
                      .+...+.++|.|+|+++ ..++.+.+|+|+|+..+.. ....+..                           .....+..
T Consensus        23 ~~~a~sstsi~vsW~~~-~~~g~i~gY~V~Y~~~~~~~~~~~~~~---------------------------~~v~~~~~   74 (120)
T 1ujt_A           23 NPVVLTPTTVQVTWTVD-RQPQFIQGYRVMYRQTSGLQATSSWQN---------------------------LDAKVPTE   74 (120)
T ss_dssp             CCCCCBTTEEEEEEEES-SCCSSCCEEEEEEEESSSSSTTTCCEE---------------------------EECCCTTC
T ss_pred             ccEEccCceEEEEEccC-CCCCcEeeEEEEEEECCCCCCCCccEE---------------------------EEecCCCc
Confidence            34556789999999975 4678999999999987431 1112200                           11223456


Q ss_pred             CceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCC-C
Q psy8774         272 ESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDV-P  314 (427)
Q Consensus       272 ~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~-P  314 (427)
                      ++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|. .++ |
T Consensus        75 ~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~-e~v~P  117 (120)
T 1ujt_A           75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTT-EESGP  117 (120)
T ss_dssp             CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEEC-SSCCC
T ss_pred             CEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECC-CCCCC
Confidence            79999999999999999999999999999999999994 444 5

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}

Probab=99.34  E-value=3.8e-12  Score=95.32  Aligned_cols=84  Identities=21%  Similarity=0.255  Sum_probs=68.0

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      |.+|.++++..++.+++.|+|++|.   +.+.+|.|+|+..+... ...                             ..
T Consensus         2 p~~P~~l~~~~~~~~sv~lsW~pP~---~~i~~Y~v~y~~~~~~~-~~~-----------------------------~~   48 (100)
T 3b83_A            2 LQPPFNIKVTNITLTTAVVTWQPPI---LPIEGILVTFGRKNDPS-DET-----------------------------TV   48 (100)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEESSCTT-TCE-----------------------------EE
T ss_pred             CccCCccEEEEecCCEEEEEEcCCc---ccCCEEEEEEEECCCCC-Cce-----------------------------EE
Confidence            6789999999999999999999987   47999999998763211 111                             11


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                      ......++++|.+|.|++.|.|+|+|+|..|.|.++.
T Consensus        49 ~~~~~~t~~~i~~L~p~t~Y~~~V~A~n~~g~s~p~~   85 (100)
T 3b83_A           49 DLTSSITSLTLTNLEPNTTYEIRIVARNGQQYSPPVS   85 (100)
T ss_dssp             EECTTEEEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             EECCcceEEEECCCCCCCEEEEEEEEEeCCCCCCCEE
Confidence            2345677999999999999999999999999888776

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.33  E-value=5.6e-12  Score=96.27  Aligned_cols=95  Identities=18%  Similarity=0.203  Sum_probs=73.5

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      .+|.+|..+++..++.+++.|+|.+|...+| .+.+|.|+|+..+   ...|..                          
T Consensus         9 ~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~---~~~w~~--------------------------   59 (112)
T 1bpv_A            9 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLP---NGRWLK--------------------------   59 (112)
T ss_dssp             CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETT---SCCCEE--------------------------
T ss_pred             CCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECC---CCceEE--------------------------
Confidence            4567788888889999999999998875554 6999999998762   233411                          


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCC-CCCccceEEee
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL-GRLSGKVTVKV  308 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~-g~~s~~~~~~t  308 (427)
                       ........+++++.+|.+++.|.|+|+|.|..|. |.+|......|
T Consensus        60 -~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~~~~~t  105 (112)
T 1bpv_A           60 -ANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAIT  105 (112)
T ss_dssp             -CCCSCCCSSEEEECSCCSSCCEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred             -eecccCccCEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEE
Confidence             0011234678999999999999999999999997 99998766665

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*

Probab=99.32  E-value=6.1e-12  Score=96.37  Aligned_cols=80  Identities=19%  Similarity=0.234  Sum_probs=63.9

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ++|.+|.+|++...+.+++.|+|++|.   |.+.+|+|.|+..+......                              
T Consensus         2 GvP~~P~~L~v~~~t~~Sv~lsW~~p~---g~i~~Y~v~y~~~~~~~~~~------------------------------   48 (114)
T 3qwq_B            2 GVSDVPRDLEVVAATPTSLLISWDSGR---GSYQYYRITYGETGGNSPVQ------------------------------   48 (114)
T ss_dssp             ---CCCEEEEEEEEETTEEEEEEECCS---CCCSEEEEEEEESSCSSCCE------------------------------
T ss_pred             CCCCCCCceEEEecCCCEEEEEEcCCc---CcccEEEEEEEECCCCCccE------------------------------
Confidence            568999999999999999999999986   88999999999863321111                              


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccC
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNG  296 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G  296 (427)
                      ........++++|.+|.|++.|.|+|+|.+..|
T Consensus        49 ~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~~~~G   81 (114)
T 3qwq_B           49 EFTVPGPVHTATISGLKPGVDYTITVYAVTDHK   81 (114)
T ss_dssp             EEEEETTCCEEEECSCCTTCEEEEEEEEEEEEE
T ss_pred             EEEeCCCcCEEEeCCCCCCCEEEEEEEEEECCc
Confidence            112345678999999999999999999999998

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.32  E-value=1.7e-11  Score=94.56  Aligned_cols=90  Identities=21%  Similarity=0.284  Sum_probs=72.7

Q ss_pred             EEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccC---CCceEEEe---eeeeEEEEccCCCCcEEEEEEEEeeCCC
Q psy8774          96 SHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID---ANNVIHRN---TTQTKAVFSNLEEGIEYSAEVQAITKAG  169 (427)
Q Consensus        96 ~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~---~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~a~~~~g  169 (427)
                      .+...++++|.|+|+++   ..++.+.+|.|.|+..+.   ...+....   ...+++.|.+|.|++.|.|+|+|+|..|
T Consensus        23 ~~~a~sstsi~vsW~~~---~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G   99 (120)
T 1ujt_A           23 NPVVLTPTTVQVTWTVD---RQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEF   99 (120)
T ss_dssp             CCCCCBTTEEEEEEEES---SCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSC
T ss_pred             ccEEccCceEEEEEccC---CCCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCCc
Confidence            34566889999999964   456889999999998753   12333222   3378999999999999999999999999


Q ss_pred             CCCCCCCeEEEccccc-CCC
Q psy8774         170 PGPWSPKLSLMTARDM-VRA  188 (427)
Q Consensus       170 ~~~~s~~~~~~t~~~~-p~~  188 (427)
                      .|++|..+.++|.+++ |..
T Consensus       100 ~Gp~S~~v~~~T~e~v~Ps~  119 (120)
T 1ujt_A          100 QGMDSESKTVRTTEESGPSS  119 (120)
T ss_dssp             CCCCCCCEEEEECSSCCCCC
T ss_pred             cCCCCCCEEEECCCCCCCCC
Confidence            9999999999998877 653

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}

Probab=99.31  E-value=2.1e-11  Score=91.16  Aligned_cols=81  Identities=26%  Similarity=0.327  Sum_probs=66.2

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      +.+|.++++...+.+++.|+|++|.     +.+.+|.|+|+.........  ......+++.|.+|.|++.|.|+|+|.|
T Consensus         2 p~~P~~l~~~~~~~~sv~lsW~pP~-----~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n   76 (100)
T 3b83_A            2 LQPPFNIKVTNITLTTAVVTWQPPI-----LPIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLEPNTTYEIRIVARN   76 (100)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEESSCTTTCEEEEECTTEEEEEECSCCTTCEEEEEEEEEE
T ss_pred             CccCCccEEEEecCCEEEEEEcCCc-----ccCCEEEEEEEECCCCCCceEEEECCcceEEEECCCCCCCEEEEEEEEEe
Confidence            4579999999999999999999984     36889999998764333332  2345689999999999999999999999


Q ss_pred             CCCCCCCC
Q psy8774         167 KAGPGPWS  174 (427)
Q Consensus       167 ~~g~~~~s  174 (427)
                      ..|.|.++
T Consensus        77 ~~g~s~p~   84 (100)
T 3b83_A           77 GQQYSPPV   84 (100)
T ss_dssp             TTEECCCE
T ss_pred             CCCCCCCE
Confidence            99887544

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.30  E-value=1.5e-11  Score=90.87  Aligned_cols=88  Identities=20%  Similarity=0.218  Sum_probs=69.1

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.+|++...+.+++.|+|++|.   +.+.+|.|.|+..+... ..+                             ...
T Consensus         3 ~~P~~l~~~~~~~~si~lsW~~p~---~~i~~Y~v~y~~~~~~~-~~~-----------------------------~~~   49 (94)
T 1j8k_A            3 DRPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGI-HEL-----------------------------FPA   49 (94)
T ss_dssp             CCCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEE-EEE-----------------------------CCC
T ss_pred             CCCCccEEEeecCCEEEEEEcCCC---CCcceEEEEEEeCCCCC-ceE-----------------------------Eec
Confidence            578999999999999999999987   78999999998763211 111                             112


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      ..+..++++|.+|.|++.|.|+|+|++..|.|..+. ..+.|
T Consensus        50 ~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~-~~~~T   90 (94)
T 1j8k_A           50 PDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLI-GTQST   90 (94)
T ss_dssp             CCSSCCEEEECSCCCCSEEEEEEEECSSSCCCCCEE-EEEEC
T ss_pred             CCCCccEEEeCCCCCCCEEEEEEEEEcCCCcCCCEE-eEEEe
Confidence            235678999999999999999999999998887765 44444

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.30  E-value=4.2e-12  Score=96.97  Aligned_cols=94  Identities=24%  Similarity=0.287  Sum_probs=73.0

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      |+.+|...++...+.+++.|+|.+|. .+.+..+.+|.|+++..+. ..|....   ...+.+.+.+|.|++.|.|+|+|
T Consensus        10 ~p~~P~~P~v~~v~~~sv~L~W~~P~-~~gg~~i~~Y~Ve~~~~~~-~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A   87 (112)
T 1bpv_A           10 PIDPPGKPVPLNITRHTVTLKWAKPE-YTGGFKITSYIVEKRDLPN-GRWLKANFSNILENEFTVSGLTEDAAYEFRVIA   87 (112)
T ss_dssp             CCCCCCCCEEEEEETTEEEEECCCCS-CCTTCCCSCCEEEEEETTS-CCCEECCCSCCCSSEEEECSCCSSCCEEEEEEE
T ss_pred             CCCCCCCCEEEEeeCCEEEEEECCCC-cCCCCcccEEEEEEEECCC-CceEEeecccCccCEEEECCCCCCCEEEEEEEE
Confidence            55567777888889999999999874 2334468999999998632 3343322   44788999999999999999999


Q ss_pred             eeCCCC-CCCCCCeEEEccc
Q psy8774         165 ITKAGP-GPWSPKLSLMTAR  183 (427)
Q Consensus       165 ~~~~g~-~~~s~~~~~~t~~  183 (427)
                      .|..|. |.+|..+...+..
T Consensus        88 ~N~~G~~s~~S~~~~~~t~~  107 (112)
T 1bpv_A           88 KNAAGAISPPSEPSDAITCR  107 (112)
T ss_dssp             ECTTSCEEEEEEEEEEECSC
T ss_pred             EECCCCCCCCCCCCCCEEeC
Confidence            999997 8888777766643

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=2.4e-11  Score=95.20  Aligned_cols=103  Identities=18%  Similarity=0.204  Sum_probs=74.1

Q ss_pred             cccCCCCC-ceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccc-cccccccccccccccceeEEeeecccccc
Q psy8774         183 RDMVRAPL-GVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDL-DEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       183 ~~~p~~p~-~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      ..+|.+|. ++++...+.+++.|+|++|.. ++ +.+|.|.|........ .+..                      ...
T Consensus        13 ~~~P~~P~~~~~~~~~~~~sv~L~W~~p~~-~g-~~~Y~~~Y~~~~~~~~~~~~~----------------------~~~   68 (127)
T 2dmk_A           13 LTAPNPPSIREELCTASHDTITVHWISDDE-FS-ISSYELQYTIFTGQANFISLY----------------------NSV   68 (127)
T ss_dssp             CSSCCCCEEEEEEEEEETTEEEEEEECSCC-SS-EEEEEEEEEEESCCSCHHHHH----------------------HTG
T ss_pred             cCCCcCCCCCCEEEeeeCCEEEEEECCCCC-CC-ccceEEEEEEecccccccccc----------------------cCC
Confidence            45688998 899999999999999999984 34 8899999986311000 0000                      000


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                      ..|........+++++.+|.|++.|.|+|+|+|..|. .+|.++.++|.+
T Consensus        69 ~~w~~~~~~~~~~~~v~gL~p~t~Y~frV~A~N~~G~-~~S~~v~~~T~~  117 (127)
T 2dmk_A           69 DSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAINQAGS-RNSEPTRLKTNS  117 (127)
T ss_dssp             GGSEEEEEECSSEEEEESCCSSCEEEEEEEEEESSCE-EECCCEEEECCS
T ss_pred             CCcEEeecccCCeEEECCCCCCCEEEEEEEEEeCCCC-CCCcCeEeEeCC
Confidence            1123222245678999999999999999999999999 578888888853

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}

Probab=99.28  E-value=7.8e-12  Score=96.91  Aligned_cols=87  Identities=17%  Similarity=0.172  Sum_probs=68.0

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      ..+|.+|.+|++...+.+++.|+|++|.   +.+.+|+|.|+..+......                             
T Consensus        26 ~tp~~~P~~l~v~~~t~~Si~lsW~~p~---~~i~~Y~V~y~~~~~~~~~~-----------------------------   73 (121)
T 2ocf_D           26 GSVSDVPTKLEVVAATPTSLLISWDAPA---VTVRYYRITYGETGGNSPVQ-----------------------------   73 (121)
T ss_dssp             ---CCSCEEEEEEEECSSCEEEEEECCS---SCCCEEEEEEEETTTCSCBE-----------------------------
T ss_pred             cCCCCCCCccEEEecCCCEEEEEEcCCC---CCCcEEEEEEEECCCCCccE-----------------------------
Confidence            3467899999999999999999999987   56999999998763321111                             


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                       ........++++|.+|.|++.|.|+|+|++..|.|+.|.
T Consensus        74 -~~~v~~~~t~~~l~gL~P~t~Y~~~V~A~~~~G~g~~Ss  112 (121)
T 2ocf_D           74 -EFTVPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAGS  112 (121)
T ss_dssp             -EEEEETTCCEEEECCCCTTCEEEEEEEEECCHHHHHHSC
T ss_pred             -EEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCCccCCCC
Confidence             112345678999999999999999999999999887653

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}

Probab=99.28  E-value=1.7e-11  Score=91.10  Aligned_cols=86  Identities=19%  Similarity=0.305  Sum_probs=68.4

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce--EEEeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--IHRNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      +.+|.+|++...+.+++.|+|++|.     +.+.+|.|.|...++....  .......+++.|.+|.|++.|.|+|+|.+
T Consensus         5 ~~~P~~l~v~~~t~~Si~lsW~~p~-----~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~   79 (97)
T 3qht_C            5 SSVPTKLEVVAATPTSLLISWDASS-----SSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYY   79 (97)
T ss_dssp             CCSSSSCEEEEEETTEEEEECCCCC-----SSCCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCCCceEEEecCCCEEEEEEeCCC-----CCCCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence            4578999999999999999999873     6899999999987443212  23334588999999999999999999999


Q ss_pred             CCCCCCC-CCCeEE
Q psy8774         167 KAGPGPW-SPKLSL  179 (427)
Q Consensus       167 ~~g~~~~-s~~~~~  179 (427)
                      ..|.|+. +.++.+
T Consensus        80 ~~G~gp~ss~p~~~   93 (97)
T 3qht_C           80 SYYDLYYSYSPSSI   93 (97)
T ss_dssp             EETTEEEECSCEEE
T ss_pred             CCccCCCCCCCEEE
Confidence            9998854 344433

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.28  E-value=1.6e-11  Score=93.37  Aligned_cols=94  Identities=13%  Similarity=0.077  Sum_probs=70.1

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccc------cccccccccccccccceeEEeeecc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDL------DEWSQKSIPLTESSNIARIFYTMTA  256 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  256 (427)
                      ...|.+|.+|++..++.+++.|+|++|.   +.+.+|+|.|....+...      ...  +                   
T Consensus         6 ~~~pp~p~~L~v~~~T~~Si~LsW~~p~---g~v~~Y~i~y~~~~~~~~e~~~~~~~~--~-------------------   61 (112)
T 2cui_A            6 SGSRPRLSQLSVTDVTTSSLRLNWEAPP---GAFDSFLLRFGVPSPSTLEPHPRPLLQ--R-------------------   61 (112)
T ss_dssp             CCCCCCCCCCEEESCCSSCEEEECCCCT---TSCSEEEEEEECCCCSSSCCCSSCCCC--E-------------------
T ss_pred             CCCCCCCCceEEEeecCCeEEEEECCCC---CCccEEEEEEEeCCCCccccccccCcc--e-------------------
Confidence            3456889999999999999999999886   789999999987632100      000  0                   


Q ss_pred             ccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         257 VEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                             .....+..++++|.+|.|++.|.|+|+|++..|.|.... ....|
T Consensus        62 -------~~~v~~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~-~~~~T  105 (112)
T 2cui_A           62 -------ELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQ-GTART  105 (112)
T ss_dssp             -------EEEEETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEEE-EEEEC
T ss_pred             -------EEEcCCCcCEEEeCCCCCCCEEEEEEEEEECCcccCCEE-EEEEE
Confidence                   123446678999999999999999999998876554333 34445

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.8e-12  Score=98.02  Aligned_cols=93  Identities=20%  Similarity=0.235  Sum_probs=73.8

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      ..+|.+|.+|++...+.+++.|+|++|.   +.+.+|+|.|+.....  ..+.                           
T Consensus         5 ~~~p~~P~~l~v~~~t~~si~lsW~~p~---g~i~~Y~v~y~~~~~~--~~~~---------------------------   52 (105)
T 2ekj_A            5 SSGRSPPSNLALASETPDSLQVSWTPPL---GRVLHYWLTYAPASGL--GPEK---------------------------   52 (105)
T ss_dssp             CTTCCCCEEEEEEEEETTEEEEEEECCS---SCCSBBCBBCCCTTSC--SCCC---------------------------
T ss_pred             ccCCCCCCceEEEeCCCCEEEEEEeCCC---CcceEEEEEEEECCCC--CccE---------------------------
Confidence            3467899999999999999999999995   8899999999875321  1110                           


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                       ........++++|.+|+|++.|.|+|+|++..|.|..+.. .+.|.
T Consensus        53 -~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g~g~~s~~-~~~T~   97 (105)
T 2ekj_A           53 -SVSVPGARSHVTLPDLQAATKYRVLVSAIYAAGRSEAVSA-TGQTA   97 (105)
T ss_dssp             -CBCCBTTSSEEEECSCCSSCCCBCBBCBBCSSCBCCCBCC-BCCCC
T ss_pred             -EEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCccCCcccc-EEEcc
Confidence             1223456789999999999999999999999999988774 45564

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}

Probab=99.27  E-value=2.7e-11  Score=90.24  Aligned_cols=84  Identities=29%  Similarity=0.336  Sum_probs=67.3

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      +.+|.++.+...+.+++.|+|.+|.   +.+.+|.|+|+.....  ..+.                            ..
T Consensus         2 ~~~P~~l~v~~~~~~sv~l~W~~p~---~~i~~Y~v~y~~~~~~--~~~~----------------------------~~   48 (98)
T 3teu_A            2 LDAPTDLQVTNVTDTSITVSWTPPS---ATITGYRITYTPSNGP--GEPK----------------------------EL   48 (98)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEETTSC--SCCE----------------------------EE
T ss_pred             CCCCCceEEEEecCCEEEEEEeCCC---CcccEEEEEEEECCCC--CceE----------------------------EE
Confidence            5789999999999999999999985   8899999999865321  1110                            11


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                      ......++++|.+|.|++.|.|+|+|.+..|.|.++.
T Consensus        49 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~p~~   85 (98)
T 3teu_A           49 TVPPSSTSVTITGLTPGVEYVVSVYALKDNQESPPLV   85 (98)
T ss_dssp             EECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             EcCCCcCEEEecCCCCCCEEEEEEEEEeCCCCCCCeE
Confidence            2335678999999999999999999999999877654

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*

Probab=99.26  E-value=3.8e-10  Score=95.86  Aligned_cols=174  Identities=13%  Similarity=0.142  Sum_probs=112.7

Q ss_pred             eeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCC-Cc-eEE-----EeeeeeEEEEcc--CCCCcEEEEEEEE
Q psy8774          94 NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDA-NN-VIH-----RNTTQTKAVFSN--LEEGIEYSAEVQA  164 (427)
Q Consensus        94 ~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~-~~-~~~-----~~~~~~~~~i~~--L~p~t~Y~~~V~a  164 (427)
                      ++.+...+...+.++|++..    ......|.+.|...... .. ..+     .......+.+..  +.....|.|.|.+
T Consensus         4 nl~C~~~~~~~~~C~W~~~~----~~~~~~y~l~y~~~~~~~~~~~~C~~y~~~~~~~~~C~~~~~~~~~~~~~~i~v~~   79 (199)
T 2b5i_C            4 EVQCFVFNVEYMNCTWQSSS----EPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD   79 (199)
T ss_dssp             CCEEEEETTTEEEEECCCCS----SSSCCCCEEEEEETTSSSCCCEECSSEEEETTEEEEEEEEGGGCCTTSCEEEEEEC
T ss_pred             cCEEEECCCcEEEEEecCCC----cCCCceEEEEEEECCCCCCccccCCCccccCCceeEEEECCcccccceEEEEEEEe
Confidence            67788778899999999873    12235788887754211 11 111     112245566655  4455678887753


Q ss_pred             eeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccc
Q psy8774         165 ITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTE  243 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~  243 (427)
                        ..|.. .+....+.. ....|.||.+|++.......+.|+|++|. .. ....|+|+|+...   ...|         
T Consensus        80 --~~g~~-~s~~~~~~~~~iVkP~pP~~l~~~~~~~~~l~l~W~~p~-~~-~~l~yev~y~~~~---~~~w---------  142 (199)
T 2b5i_C           80 --PREPR-RQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRF-LN-HCLEHLVQYRTDW---DHSW---------  142 (199)
T ss_dssp             --SSCTT-CEEEEEECGGGSEECCCCEEEEEEEEETTEEEEEEECSS-CS-TTCEEEEEEEETT---CSSC---------
T ss_pred             --CCcce-ecceEEEchHHceecCCCcEEEEEECCCCCEEEEECCCC-CC-CceEEEEEEeecC---Cccc---------
Confidence              23321 233344443 23458999999999888889999999986 22 3458999999762   2234         


Q ss_pred             cccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEecc-----C-CCCCccceEEee
Q psy8774         244 SSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN-----G-LGRLSGKVTVKV  308 (427)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~-----G-~g~~s~~~~~~t  308 (427)
                                          ........+++.|.+|.|++.|.|+|||....     | .|.+|.++.+.|
T Consensus       143 --------------------~~~~~~~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t  193 (199)
T 2b5i_C          143 --------------------TEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGS  193 (199)
T ss_dssp             --------------------EEEEECSSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC--
T ss_pred             --------------------EEEeccCceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecC
Confidence                                32334456788999999999999999999853     2 566677666665

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}

Probab=99.26  E-value=1.8e-11  Score=94.91  Aligned_cols=85  Identities=20%  Similarity=0.337  Sum_probs=66.5

Q ss_pred             CCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEEEeeeeeEEEEccCCCCcEEEEE
Q psy8774          84 PEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRNTTQTKAVFSNLEEGIEYSAE  161 (427)
Q Consensus        84 ~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~  161 (427)
                      ....|+.+|.+|++...+.++|.|+|++|.     +.+.+|.|.|...++..  .........+++.|.+|.|++.|.|+
T Consensus        24 ~~~tp~~~P~~l~v~~~t~~Si~lsW~~p~-----~~i~~Y~V~y~~~~~~~~~~~~~v~~~~t~~~l~gL~P~t~Y~~~   98 (121)
T 2ocf_D           24 FQGSVSDVPTKLEVVAATPTSLLISWDAPA-----VTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTIT   98 (121)
T ss_dssp             -----CCSCEEEEEEEECSSCEEEEEECCS-----SCCCEEEEEEEETTTCSCBEEEEEETTCCEEEECCCCTTCEEEEE
T ss_pred             eccCCCCCCCccEEEecCCCEEEEEEcCCC-----CCCcEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEE
Confidence            444567889999999999999999999984     35889999999874332  12233355789999999999999999


Q ss_pred             EEEeeCCCCCCC
Q psy8774         162 VQAITKAGPGPW  173 (427)
Q Consensus       162 V~a~~~~g~~~~  173 (427)
                      |+|.+..|.|+.
T Consensus        99 V~A~~~~G~g~~  110 (121)
T 2ocf_D           99 VYAVTGLRLMLA  110 (121)
T ss_dssp             EEEECCHHHHHH
T ss_pred             EEEEeCCCccCC
Confidence            999999988754

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}

Probab=99.26  E-value=1.8e-10  Score=104.74  Aligned_cols=138  Identities=24%  Similarity=0.242  Sum_probs=103.1

Q ss_pred             eeeEEEEcc-CCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCC-CceeEEE
Q psy8774         143 TQTKAVFSN-LEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGR-GKILGYQ  220 (427)
Q Consensus       143 ~~~~~~i~~-L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~-g~i~~Y~  220 (427)
                      ....+.|.+ +.+...+.++..|.|..|....+..+.+   ..+|.+|.++.+.....+++.|+|.+|...+ ..+..|.
T Consensus       158 ~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v---~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~  234 (305)
T 2nzi_A          158 SFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDV---ADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYI  234 (305)
T ss_dssp             SEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEE---EBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEE
T ss_pred             CceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEE---ecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEE
Confidence            356788888 9999999999999999887533322222   3567889999998889999999999876443 3789999


Q ss_pred             EEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCC
Q psy8774         221 IFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRL  300 (427)
Q Consensus       221 I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~  300 (427)
                      |++...   ....|                             ..........++|.+|.+++.|.|+|+|.|..|.|.+
T Consensus       235 v~~~~~---~~~~w-----------------------------~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~  282 (305)
T 2nzi_A          235 VEKCAT---TAERW-----------------------------LRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKP  282 (305)
T ss_dssp             EEEEET---TSCCE-----------------------------EEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCC
T ss_pred             EEEecC---CCCcc-----------------------------EECccccCceEEecCCCCCCeEEEEEEEEeCCcccCC
Confidence            999876   22334                             2222233668899999999999999999999999999


Q ss_pred             ccceEEeecCCCCCc
Q psy8774         301 SGKVTVKVKPEDVPL  315 (427)
Q Consensus       301 s~~~~~~t~~~~~P~  315 (427)
                      |......+.++.+|.
T Consensus       283 S~~~~~~~t~~~~p~  297 (305)
T 2nzi_A          283 SEPSEPTITKEDKTR  297 (305)
T ss_dssp             CCCCCCEECCC----
T ss_pred             cCCCCCEEcCCcccc
Confidence            987665555655554

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}

Probab=99.26  E-value=2e-11  Score=92.94  Aligned_cols=94  Identities=12%  Similarity=0.212  Sum_probs=70.0

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE--eeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--NTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      ++.+|..+.+. .+.+++.|+|.++  .+.+.+|.+|.|+|+.......+...  ....+++.|.+|.|++.|.|+|.|.
T Consensus         8 ~P~pP~~~~~~-~~~~sv~L~W~p~--~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~   84 (114)
T 2kbg_A            8 EPSPPSIHGQP-SSGKSFKLSITKQ--DDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAA   84 (114)
T ss_dssp             CCCSCCEECCB-CSTTCEEEEECCC--CCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEE
T ss_pred             CccCCcccccc-cCCCEEEEEEECC--CCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEE
Confidence            44567555433 6889999999976  46677999999999987332222222  2447789999999999999999999


Q ss_pred             eCCCCCCCCCCeEEEccccc
Q psy8774         166 TKAGPGPWSPKLSLMTARDM  185 (427)
Q Consensus       166 ~~~g~~~~s~~~~~~t~~~~  185 (427)
                      |..|.|..|. ..++|...+
T Consensus        85 N~~G~s~pS~-~~~~T~~~~  103 (114)
T 2kbg_A           85 NRLGYSEPTV-YEFSMPPKP  103 (114)
T ss_dssp             CTTSCEEEEE-EEECCCCCC
T ss_pred             eCCcCcCCcC-CEEEcCCCC
Confidence            9999987664 567665443

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1

Probab=99.25  E-value=9.2e-11  Score=89.97  Aligned_cols=90  Identities=20%  Similarity=0.267  Sum_probs=62.7

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--------------eeeeEEEEccC
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--------------TTQTKAVFSNL  152 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--------------~~~~~~~i~~L  152 (427)
                      .|+.+|.   +...+.+++.|+|.+|.  +.+.+|.+|.|+|+..+....|....              ...+++.+.+|
T Consensus         4 ~pP~~P~---v~~~~~~sv~L~W~~P~--~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L   78 (115)
T 2ic2_A            4 YPPTPPN---VTRLSDESVMLRWMVPR--NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDL   78 (115)
T ss_dssp             CCCCCCE---EEECC---EEEEEEEEC--CSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSC
T ss_pred             CCCCcCE---eEEEeCCEEEEEEcCCC--CCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCC
Confidence            3556675   66788999999999985  44478999999999863233443322              23468899999


Q ss_pred             CCCcEEEEEEEEeeCCCCC---CCCCCeEEEc
Q psy8774         153 EEGIEYSAEVQAITKAGPG---PWSPKLSLMT  181 (427)
Q Consensus       153 ~p~t~Y~~~V~a~~~~g~~---~~s~~~~~~t  181 (427)
                      .|++.|.|+|+|.|..|.|   ..|..+.+.+
T Consensus        79 ~p~t~Y~FRV~A~N~~G~~~pS~~S~~~~~~~  110 (115)
T 2ic2_A           79 KPQHTYRFRILAVYSNNDNKESNTSAKFYLQP  110 (115)
T ss_dssp             CSSEEEEEEEEEEETTSCEEECCCCCCEEECC
T ss_pred             CCCCEEEEEEEEEeCCCCCCCCCCCCCEEeCC
Confidence            9999999999999999975   4455555443

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=1.8e-11  Score=94.97  Aligned_cols=88  Identities=25%  Similarity=0.232  Sum_probs=71.9

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCCCC-CceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGR-GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~-g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      .++|.+|.++++...+.+++.|+|++|...+ ..+.+|.|+|+...   ...|                           
T Consensus        15 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~---~~~w---------------------------   64 (120)
T 2yux_A           15 IDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKK---SMEW---------------------------   64 (120)
T ss_dssp             CCCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETT---TCCC---------------------------
T ss_pred             ecCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECC---CCce---------------------------
Confidence            3578999999999999999999999998555 46999999998762   2333                           


Q ss_pred             ccccc-ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         262 EWSQK-SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       262 ~~~~~-~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                        ... .....+++++.+|.|++.|.|+|+|.|..|.|.+|.
T Consensus        65 --~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~  104 (120)
T 2yux_A           65 --FTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDAT  104 (120)
T ss_dssp             --EEEESSCCSSCCEECCCCSSEEEEEEECCCSSSCSCSSCE
T ss_pred             --EEeeecCCcCEEEECCCCCCCEEEEEEEEeeCCcCCCCcc
Confidence              111 234567899999999999999999999999999886

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1

Probab=99.25  E-value=5.6e-11  Score=86.56  Aligned_cols=85  Identities=22%  Similarity=0.348  Sum_probs=68.0

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      +|.+|.++++...+.+++.|+|+++.. ++.+.+|+|+. ..      ..                             .
T Consensus         3 ~P~~P~~l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~~-~~------~~-----------------------------~   45 (88)
T 1k85_A            3 APTAPTNLASTAQTTSSITLSWTASTD-NVGVTGYDVYN-GT------AL-----------------------------A   45 (88)
T ss_dssp             SCCCCEEEEEEEECSSCEEEEEECCSC-CSSEEEEEEEE-SS------SE-----------------------------E
T ss_pred             CcCCCCccEEEeccCCEEEEEECCCCC-CCCccEEEEEE-CC------EE-----------------------------E
Confidence            678999999999999999999999874 45699999973 11      11                             0


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccCC-CCCccceEEee
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNGL-GRLSGKVTVKV  308 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~-g~~s~~~~~~t  308 (427)
                        .....+++++.+|.|++.|.|+|+|+|..|. |..|..+.++|
T Consensus        46 --~~~~~~~~~~~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T   88 (88)
T 1k85_A           46 --TTVTGTTATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT   88 (88)
T ss_dssp             --EEESSSEEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred             --eecCCCEEEeCCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence              1123468999999999999999999999996 88888887765

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}

Probab=99.24  E-value=3.5e-11  Score=89.50  Aligned_cols=83  Identities=17%  Similarity=0.153  Sum_probs=66.1

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      ++|.+|++..++.+++.|+|++|.   +.+.+|.|.|+.........                              ...
T Consensus         3 p~P~~l~v~~~t~~Sv~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~------------------------------~~~   49 (98)
T 3tes_A            3 PAPKNLVVSEVTEDSLRLSWTAPD---AAFDSFMIQYQESEKVGEAI------------------------------NLT   49 (98)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCT---TSCSEEEEEEEETTBCSCCE------------------------------EEE
T ss_pred             CCCCceEEEecCCCeEEEEecCCc---CccceEEEEEEECCCCCceE------------------------------EEE
Confidence            478899999999999999999987   68999999999863211111                              122


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                      .....++++|.+|+|++.|.|+|+|.+..|.|.+..
T Consensus        50 ~~~~~t~~~l~gL~P~t~Y~~~V~A~~~~g~S~p~~   85 (98)
T 3tes_A           50 VPGSERSYDLTGLKPGTEYTVSIYGVKGGHRSNPLS   85 (98)
T ss_dssp             EETTCSEEEECSCCTTCEEEEEEEEEETTEEBCCEE
T ss_pred             cCCCcCEEEECCCCCCCEEEEEEEEEeCCcccCCEE
Confidence            345678999999999999999999999987766544

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A

Probab=99.23  E-value=9.2e-11  Score=87.82  Aligned_cols=78  Identities=21%  Similarity=0.426  Sum_probs=64.6

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce--EEEeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--IHRNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      .+|.+|++...+.+++.|+|++|.   .++.+.+|.|.|...+.....  .......+++.|.+|.|++.|.|+|+|.+.
T Consensus         6 ~~P~~l~v~~~t~~Sv~l~W~~p~---~~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~   82 (101)
T 3k2m_C            6 SVPTKLEVVAATPTSLLISWDAPM---SSSSVYYYRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVYAWGE   82 (101)
T ss_dssp             BSSCEEEEEEEETTEEEEEECCCC---TTSCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred             CCCcceEEeecCCCEEEEEecCCC---CCCceeeEEEEEEECCCCCccEEEEcCCCccEEEECCCCCCCEEEEEEEEEeC
Confidence            478999999999999999999984   357899999999987433222  223355889999999999999999999998


Q ss_pred             CCC
Q psy8774         168 AGP  170 (427)
Q Consensus       168 ~g~  170 (427)
                      .|.
T Consensus        83 ~~~   85 (101)
T 3k2m_C           83 DSA   85 (101)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            877

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1

Probab=99.23  E-value=1.6e-11  Score=94.20  Aligned_cols=75  Identities=20%  Similarity=0.297  Sum_probs=57.4

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEe-cCccceeEe-e------------cCcceEEEcCCCCCceEEEEEEEE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVR-EHTLKENLV-N------------SKNMSFLITNLERGVEYEFRIAGQ   68 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~-~~~~~~~~~-~------------~~~~~~~~~~L~p~t~Y~~~V~a~   68 (427)
                      .+++.++|.|+|.+|.+.+++|.+|.|+|+.. ....|.... .            ...+++++.+|.|++.|.|||+|.
T Consensus        12 ~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A~   91 (115)
T 2ic2_A           12 TRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAV   91 (115)
T ss_dssp             EECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEEE
T ss_pred             EEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCCCEEEEEEEEE
Confidence            46788999999999987778899999999987 345676553 1            234689999999999999999999


Q ss_pred             eccCcCccc
Q psy8774          69 NHIGYGQET   77 (427)
Q Consensus        69 ~~~g~~~~~   77 (427)
                      |..|.+.++
T Consensus        92 N~~G~~~pS  100 (115)
T 2ic2_A           92 YSNNDNKES  100 (115)
T ss_dssp             ETTSCEEEC
T ss_pred             eCCCCCCCC
Confidence            999987543

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A

Probab=99.20  E-value=2.8e-10  Score=96.35  Aligned_cols=90  Identities=14%  Similarity=0.152  Sum_probs=73.7

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      +.+|.++.+...+.+++.|+|++|.   +.+.+|+|.|..........                              ..
T Consensus       104 ~~~P~~l~v~~~t~~si~l~W~~p~---~~i~~Y~v~y~~~~~~~~~~------------------------------~~  150 (195)
T 2qbw_A          104 SSVPTNLEVVAATPTSLLISWDASY---YGVSYYRITYGETGGNSPVQ------------------------------EF  150 (195)
T ss_dssp             CCSSCCCEEEEEETTEEEEECCCCC---SSCSEEEEEEEETTCCSCCE------------------------------EE
T ss_pred             CCCCcccEEEeCCCCEEEEEEeCCC---CCccEEEEEEEECCCCCcce------------------------------EE
Confidence            4678899999999999999999986   77999999998763211011                              12


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      ...+..++++|.+|.|++.|.|+|+|++..|.|+.|.++.+++
T Consensus       151 ~v~~~~t~~~l~gL~p~t~Y~~~V~A~~~~G~g~~S~~v~~~~  193 (195)
T 2qbw_A          151 TVPYSSSTATISGLKPGVDYTITVYAYSDYYGSHHYSPISINY  193 (195)
T ss_dssp             EEETTCSEEEECSCCTTCEEEEEEEEESSTTSSCBCCCEEEEE
T ss_pred             EeCCCCCEEEeCCCCCCCEEEEEEEEEeCCccCCCCCCEEEEe
Confidence            2345668999999999999999999999999999999888875

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}

Probab=99.19  E-value=6.5e-11  Score=91.79  Aligned_cols=86  Identities=23%  Similarity=0.284  Sum_probs=69.2

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE--eeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--NTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      ++.+|.++++...+.+++.|+|++|. .+.++.+.+|.|+|+.... ..+...  ....+++.+.+|.|++.|.|+|+|.
T Consensus        17 ~P~~P~~l~~~~~~~~sv~l~W~~p~-~~gg~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~   94 (120)
T 2yux_A           17 RPGPPQIVKIEDVWGENVALTWTPPK-DDGNAAITGYTIQKADKKS-MEWFTVIEHYHRTSATITELVIGNEYYFRVFSE   94 (120)
T ss_dssp             CCCCCSCEEEEEEETTEEEEEECCCS-CCCSSCCCCCCEEEEETTT-CCCEEEESSCCSSCCEECCCCSSEEEEEEECCC
T ss_pred             CCCcCCCCEEEEecCCEEEEEEcCCC-cCCCCCceEEEEEEEECCC-CceEEeeecCCcCEEEECCCCCCCEEEEEEEEe
Confidence            44678899999999999999999985 2333578999999998732 333333  2457889999999999999999999


Q ss_pred             eCCCCCCCCC
Q psy8774         166 TKAGPGPWSP  175 (427)
Q Consensus       166 ~~~g~~~~s~  175 (427)
                      |..|.|.+|.
T Consensus        95 n~~G~s~~S~  104 (120)
T 2yux_A           95 NMCGLSEDAT  104 (120)
T ss_dssp             SSSCSCSSCE
T ss_pred             eCCcCCCCcc
Confidence            9999987764

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*

Probab=99.19  E-value=9.7e-11  Score=89.61  Aligned_cols=75  Identities=21%  Similarity=0.380  Sum_probs=63.0

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEEEeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      .+|.+|++...+.+++.|+|.+|.     +.+.+|.|.|+...+..  .........+++.|.+|.|++.|.|+|+|.+.
T Consensus         5 ~~P~~L~v~~~t~~Sv~lsW~~p~-----g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~~~   79 (114)
T 3qwq_B            5 DVPRDLEVVAATPTSLLISWDSGR-----GSYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAVTD   79 (114)
T ss_dssp             CCCEEEEEEEEETTEEEEEEECCS-----CCCSEEEEEEEESSCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred             CCCCceEEEecCCCEEEEEEcCCc-----CcccEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEEC
Confidence            579999999999999999999873     68999999999874432  22233455889999999999999999999999


Q ss_pred             CC
Q psy8774         168 AG  169 (427)
Q Consensus       168 ~g  169 (427)
                      .|
T Consensus        80 ~G   81 (114)
T 3qwq_B           80 HK   81 (114)
T ss_dssp             EE
T ss_pred             Cc
Confidence            88

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}

Probab=99.19  E-value=1.5e-10  Score=86.14  Aligned_cols=77  Identities=13%  Similarity=0.294  Sum_probs=63.3

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc--eEEEeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN--VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      +|.++++...+.+++.|+|.+|.     +.+.+|.|+|+.......  ........+++.|.+|.|++.|.|+|+|.+..
T Consensus         4 ~P~~l~v~~~t~~Sv~lsW~~p~-----~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~~   78 (98)
T 3tes_A            4 APKNLVVSEVTEDSLRLSWTAPD-----AAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKGG   78 (98)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCT-----TSCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCceEEEecCCCeEEEEecCCc-----CccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeCC
Confidence            58899999999999999999984     478899999998742222  22334568899999999999999999999987


Q ss_pred             CCCC
Q psy8774         169 GPGP  172 (427)
Q Consensus       169 g~~~  172 (427)
                      |.|.
T Consensus        79 g~S~   82 (98)
T 3tes_A           79 HRSN   82 (98)
T ss_dssp             EEBC
T ss_pred             cccC
Confidence            7663

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1

Probab=99.18  E-value=5.7e-10  Score=81.12  Aligned_cols=85  Identities=25%  Similarity=0.334  Sum_probs=68.1

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      +|.+|.++++...+.+++.|+|+++.  + ++.+.+|.|+.  .  +.  .......+++.+.+|.|++.|.|+|+|.|.
T Consensus         3 ~P~~P~~l~~~~~~~~sv~L~W~~~~--~-~~~i~~Y~v~~--~--~~--~~~~~~~~~~~~~~L~~~t~Y~~~V~A~n~   73 (88)
T 1k85_A            3 APTAPTNLASTAQTTSSITLSWTAST--D-NVGVTGYDVYN--G--TA--LATTVTGTTATISGLAADTSYTFTVKAKDA   73 (88)
T ss_dssp             SCCCCEEEEEEEECSSCEEEEEECCS--C-CSSEEEEEEEE--S--SS--EEEEESSSEEEECCCCSSCEEEEEEEEEET
T ss_pred             CcCCCCccEEEeccCCEEEEEECCCC--C-CCCccEEEEEE--C--CE--EEeecCCCEEEeCCCCCCCEEEEEEEEEeC
Confidence            45678999999999999999999884  2 34688999983  2  22  223345688999999999999999999999


Q ss_pred             CCC-CCCCCCeEEEc
Q psy8774         168 AGP-GPWSPKLSLMT  181 (427)
Q Consensus       168 ~g~-~~~s~~~~~~t  181 (427)
                      .|. |..|..+.++|
T Consensus        74 ~G~~s~~S~~v~v~T   88 (88)
T 1k85_A           74 AGNVSAASNAVSVKT   88 (88)
T ss_dssp             TTEECCCCCCEEEEC
T ss_pred             CCCcCCCCCCEEEEC
Confidence            998 77788887764

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}

Probab=99.18  E-value=2.8e-10  Score=84.67  Aligned_cols=78  Identities=19%  Similarity=0.408  Sum_probs=64.3

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--EeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      .+|.++++...+.+++.|+|.+|.     +.+.+|.|+|+.......+..  .....+++.|.+|.|++.|.|+|+|.|.
T Consensus         3 ~~P~~l~v~~~~~~sv~l~W~~p~-----~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   77 (98)
T 3teu_A            3 DAPTDLQVTNVTDTSITVSWTPPS-----ATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKD   77 (98)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEETTSCSCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCceEEEEecCCEEEEEEeCCC-----CcccEEEEEEEECCCCCceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeC
Confidence            468999999999999999999983     788999999997643333332  2345889999999999999999999999


Q ss_pred             CCCCC
Q psy8774         168 AGPGP  172 (427)
Q Consensus       168 ~g~~~  172 (427)
                      .|.|.
T Consensus        78 ~G~s~   82 (98)
T 3teu_A           78 NQESP   82 (98)
T ss_dssp             TEECC
T ss_pred             CCCCC
Confidence            98774

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=4.3e-10  Score=87.99  Aligned_cols=91  Identities=21%  Similarity=0.279  Sum_probs=71.0

Q ss_pred             CCCCCe-eeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEcc----------CCCceEEE-eeeeeEEEEccCCCC
Q psy8774          88 PTGPPA-NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI----------DANNVIHR-NTTQTKAVFSNLEEG  155 (427)
Q Consensus        88 p~~~p~-~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~----------~~~~~~~~-~~~~~~~~i~~L~p~  155 (427)
                      +|.+|. ++++...+.+++.|+|.+|.  + ++ +.+|.|.|+...          ....|... ....+++++.+|.|+
T Consensus        15 ~P~~P~~~~~~~~~~~~sv~L~W~~p~--~-~g-~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~gL~p~   90 (127)
T 2dmk_A           15 APNPPSIREELCTASHDTITVHWISDD--E-FS-ISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSG   90 (127)
T ss_dssp             SCCCCEEEEEEEEEETTEEEEEEECSC--C-SS-EEEEEEEEEEESCCSCHHHHHHTGGGSEEEEEECSSEEEEESCCSS
T ss_pred             CCcCCCCCCEEEeeeCCEEEEEECCCC--C-CC-ccceEEEEEEecccccccccccCCCCcEEeecccCCeEEECCCCCC
Confidence            446788 88999999999999999994  2 23 788999988621          11233322 255789999999999


Q ss_pred             cEEEEEEEEeeCCCCCCCCCCeEEEccc
Q psy8774         156 IEYSAEVQAITKAGPGPWSPKLSLMTAR  183 (427)
Q Consensus       156 t~Y~~~V~a~~~~g~~~~s~~~~~~t~~  183 (427)
                      +.|.|+|+|.|..|. ..|..+.++|..
T Consensus        91 t~Y~frV~A~N~~G~-~~S~~v~~~T~~  117 (127)
T 2dmk_A           91 TRYIFIVKAINQAGS-RNSEPTRLKTNS  117 (127)
T ss_dssp             CEEEEEEEEEESSCE-EECCCEEEECCS
T ss_pred             CEEEEEEEEEeCCCC-CCCcCeEeEeCC
Confidence            999999999999999 488888888853

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.17  E-value=1.2e-10  Score=88.48  Aligned_cols=82  Identities=18%  Similarity=0.341  Sum_probs=66.7

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCc----------cceeEeecCcceEEEcCCCCCceEEEEEEEEecc
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHT----------LKENLVNSKNMSFLITNLERGVEYEFRIAGQNHI   71 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~----------~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~   71 (427)
                      +.++++++|.|+|++|   .+.+.+|+|+|...++.          ..........++++|.+|.|++.|.|+|+|++..
T Consensus        17 v~~~T~~Si~LsW~~p---~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~PgT~Y~~~V~A~~~~   93 (112)
T 2cui_A           17 VTDVTTSSLRLNWEAP---PGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGP   93 (112)
T ss_dssp             EESCCSSCEEEECCCC---TTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECSS
T ss_pred             EEeecCCeEEEEECCC---CCCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCCCEEEEEEEEEECC
Confidence            4678899999999998   46789999999976553          1223336778899999999999999999999998


Q ss_pred             CcCcccceEEeCCCC
Q psy8774          72 GYGQETVRYYTTPEG   86 (427)
Q Consensus        72 g~~~~~~~~~~t~~~   86 (427)
                      +.+.+......|...
T Consensus        94 ~~s~p~~~~~~T~~~  108 (112)
T 2cui_A           94 HKADSIQGTARTLSG  108 (112)
T ss_dssp             SEEEEEEEEEECCCC
T ss_pred             cccCCEEEEEEECCC
Confidence            888777777777654

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A

Probab=99.17  E-value=5.5e-10  Score=94.56  Aligned_cols=88  Identities=19%  Similarity=0.318  Sum_probs=72.5

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce--EEEeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--IHRNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      ..+|.++++...+.+++.|+|++|.     +.+.+|.|.|.........  .......++++|.+|.|++.|.|+|+|.+
T Consensus       104 ~~~P~~l~v~~~t~~si~l~W~~p~-----~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~  178 (195)
T 2qbw_A          104 SSVPTNLEVVAATPTSLLISWDASY-----YGVSYYRITYGETGGNSPVQEFTVPYSSSTATISGLKPGVDYTITVYAYS  178 (195)
T ss_dssp             CCSSCCCEEEEEETTEEEEECCCCC-----SSCSEEEEEEEETTCCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEES
T ss_pred             CCCCcccEEEeCCCCEEEEEEeCCC-----CCccEEEEEEEECCCCCcceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEe
Confidence            4568899999999999999999884     5788999999876433312  22334478999999999999999999999


Q ss_pred             CCCCCCCCCCeEEEc
Q psy8774         167 KAGPGPWSPKLSLMT  181 (427)
Q Consensus       167 ~~g~~~~s~~~~~~t  181 (427)
                      ..|.|+.|..+.+++
T Consensus       179 ~~G~g~~S~~v~~~~  193 (195)
T 2qbw_A          179 DYYGSHHYSPISINY  193 (195)
T ss_dssp             STTSSCBCCCEEEEE
T ss_pred             CCccCCCCCCEEEEe
Confidence            999999998888764

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}

Probab=99.17  E-value=1.9e-10  Score=86.11  Aligned_cols=91  Identities=19%  Similarity=0.159  Sum_probs=68.7

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ..|.+|.+|++...+.+++.|+|..|...++.+..|+|.|.....    ..                             
T Consensus         6 ~~Ps~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~----~~-----------------------------   52 (104)
T 2dle_A            6 SGAIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD----SS-----------------------------   52 (104)
T ss_dssp             SSCCBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC----EE-----------------------------
T ss_pred             CCCCCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC----eE-----------------------------
Confidence            457889999999999999999999887666777899999975411    11                             


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                        ......++++|.+|+|++.|.|+|+|......+. +..+.+.|.|
T Consensus        53 --~~~~~~t~~~i~gL~PgT~Y~~~V~A~~~~~~~~-p~~~~~~T~p   96 (104)
T 2dle_A           53 --NLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEGT-PGFLQVHTPP   96 (104)
T ss_dssp             --EEEESSSEEECCSCCSSCEEEEEEEEESSSCCCB-CEEEEEECCC
T ss_pred             --EEcCCCCEEEECCCCCCCEEEEEEEEEECCcccC-CeeEEEEccC
Confidence              1234567899999999999999999996554433 3336666643

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A

Probab=99.17  E-value=1.8e-10  Score=84.30  Aligned_cols=78  Identities=18%  Similarity=0.210  Sum_probs=63.9

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccc--eeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLK--ENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      +.+++++++.|+|.+|   .+.+.+|+|.|...++...  ....+...+++.|.+|.|+++|.|+|.|.+..+.+.+...
T Consensus        14 vt~vt~~S~~lsW~~p---~~~v~~Y~I~y~~~~g~~~~~~~~v~g~~~s~~l~~L~PgT~Y~V~v~a~~~~~~S~p~s~   90 (95)
T 2h41_A           14 VTEITASSFVVSWVSA---SDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLILS   90 (95)
T ss_dssp             CCCCGGGCEEEECCCS---CTTEEEEEEEEEETTTCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEEEE
T ss_pred             EEEeCCCeEEEEECCC---CCCccEEEEEEEeCCCCCcceEEECCCCccEEEECCCCCCCEEEEEEEEEcCCCcccCEEE
Confidence            5789999999999998   5789999999998776432  2333788999999999999999999999998887765444


Q ss_pred             EEe
Q psy8774          80 YYT   82 (427)
Q Consensus        80 ~~~   82 (427)
                      ...
T Consensus        91 ~~~   93 (95)
T 2h41_A           91 TSQ   93 (95)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            433

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=3.2e-10  Score=85.32  Aligned_cols=79  Identities=23%  Similarity=0.411  Sum_probs=61.8

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEEEeeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRNTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      ++.+|.+|++...+.++|.|+|.+|.     + +.+|.|.|+......  ..........++.|.+|.|++.|.|+|+|.
T Consensus         8 ~~~~P~~l~~~~~~~~sv~lsW~~p~-----~-~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~   81 (104)
T 2dkm_A            8 PLPPPRALTLAAVTPRTVHLTWQPSA-----G-ATHYLVRCSPASPKGEEEEREVQVGRPEVLLDGLEPGRDYEVSVQSL   81 (104)
T ss_dssp             SCCCCCCCEEEEECSSEEEEECCCCS-----S-CSEEEEEEEESSSCCSSCCEEEEESSSEEEEESCCTTCCEEEEEEEE
T ss_pred             CCCCCceeEEEecCCCEEEEEEeCCC-----C-CCeEEEEEEECCCCCCcceEEEecCCCEEEECCCCCCCEEEEEEEEE
Confidence            44679999999999999999999884     2 379999998764321  223333344499999999999999999999


Q ss_pred             eCCCCCC
Q psy8774         166 TKAGPGP  172 (427)
Q Consensus       166 ~~~g~~~  172 (427)
                      +..|.+.
T Consensus        82 ~~~~~s~   88 (104)
T 2dkm_A           82 RGPEGSE   88 (104)
T ss_dssp             CSSSBCC
T ss_pred             CCCCCCC
Confidence            8877653

>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*

Probab=99.15  E-value=7.6e-09  Score=88.38  Aligned_cols=172  Identities=13%  Similarity=0.126  Sum_probs=109.5

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe---ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeC
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV---NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTT   83 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t   83 (427)
                      -.+++..|+++.. +.  ..|.+.+...... .....   ......+...+|.-.+.+.|.|.    .|........+..
T Consensus        36 ~~~~tc~~~~~~~-~~--~~~~~~~~~~~~~-~~c~~~~~~~~~y~~~~~~~~l~~~~~i~V~----lG~~~S~~~~f~l  107 (223)
T 3up1_A           36 QHSLTCAFEDPDV-NT--TNLEFEICGALVE-VKCLNFRKLQEIYFIETKKFLLIGKSNICVK----VGEKSLTCKKIDL  107 (223)
T ss_dssp             EEEEEEEESSTTC-CC--TTEEEEEESSBBS-CSEEECEEETTEEEEEESCBCCSSEEEEEEE----ETTEEEEEEEEEG
T ss_pred             eEEEEEecCCCCC-CC--CceEEEEeccccc-ccccccccccceEEeecCCEEEEeccEEEEE----cCCceeccEEEEe
Confidence            4578889998853 22  3455555532221 11111   22234455677888888888887    3333333445555


Q ss_pred             CCCCCCCCCeeeEEEeec-CCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeE--EEEccCCCCcEEEE
Q psy8774          84 PEGPPTGPPANISHHFQT-PDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTK--AVFSNLEEGIEYSA  160 (427)
Q Consensus        84 ~~~~p~~~p~~~~~~~~~-~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~--~~i~~L~p~t~Y~~  160 (427)
                      ...+.+.||.++.+.... ...+.|+|++|...........|.|+|+.......+.......+.  +.+.+|.|++.|.|
T Consensus       108 ~~iVKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~~~t~~~i~l~~L~Pgt~Y~v  187 (223)
T 3up1_A          108 TTIVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNLSSTKLTLLQRKLQPAAMYEI  187 (223)
T ss_dssp             GGSBCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEESSSEEEEEGGGSCTTCEEEE
T ss_pred             cceEEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEecCceeEEeccccCCCcEEEE
Confidence            556677889999988764 567999999985221111256899999987433444444444444  45579999999999


Q ss_pred             EEEEeeC-C---CCCCCCCCeEEEcccccC
Q psy8774         161 EVQAITK-A---GPGPWSPKLSLMTARDMV  186 (427)
Q Consensus       161 ~V~a~~~-~---g~~~~s~~~~~~t~~~~p  186 (427)
                      +|||... .   +.|.||.++.+.|....|
T Consensus       188 qVR~r~~~~~~G~WSeWS~~~~~~T~~~~P  217 (223)
T 3up1_A          188 KVRSIPDHYFKGFWSEWSPSYYFRTPEINN  217 (223)
T ss_dssp             EEEEEECSSCCBCCCCCCCCEEEECCCCC-
T ss_pred             EEEEeeCCCCCCCCCCCCCCeEEECCCCCC
Confidence            9999875 2   356788889998865443

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*

Probab=99.14  E-value=1.2e-09  Score=93.63  Aligned_cols=184  Identities=11%  Similarity=0.092  Sum_probs=106.4

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe-e---eeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-T---TQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~---~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      +.+|.+.......+.++|.+..  ..  ....|.+.++.........+.. .   ....+.+.--.+   +.|.|.+.+.
T Consensus         5 ~~nlsC~~~~~~~l~C~W~~~~--~~--~~t~~~l~~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~---~~~~v~~~~~   77 (214)
T 2b5i_B            5 TSQFTCFYNSRAQISCVWSQDG--AL--QDTSCQVHAWPDRRRWQQTCELLPVSQASWACNLILGAP---DSQKLTTVDI   77 (214)
T ss_dssp             -CEEEEEECSSSEEEEEEEC----------CCEEEEEEETTSSCCEEEECEECSTTCEEEEEECSST---TCCCCCTTCC
T ss_pred             CCCCEEEECCcceeEEEecCCC--CC--CceeEEEEEEcCCCCccceeeecCCCCcceEEEecCCCC---CcEEEEEEee
Confidence            5789988888899999999763  21  2456777776542222212211 1   123344321111   1122222222


Q ss_pred             CCCCC---CC-CCeEEEcccccC------CCCCceEEEeeeCcEEEEEeeeCCCCC--CceeEEEEEEEecccccccccc
Q psy8774         168 AGPGP---WS-PKLSLMTARDMV------RAPLGVKALATSDQSVEVWWKPVPAGR--GKILGYQIFYTMTAVEDLDEWS  235 (427)
Q Consensus       168 ~g~~~---~s-~~~~~~t~~~~p------~~p~~l~~~~~~~~si~v~W~~p~~~~--g~i~~Y~I~~~~~~~~~~~~~~  235 (427)
                      .|.+.   .. ......+..-.|      .+|.++++...+.+.+.|+|+.|...+  +.+..|+|.|+..+.    .|.
T Consensus        78 ~g~~~~~~~~~~~~~~~~~~vkP~~~vk~~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~----~w~  153 (214)
T 2b5i_B           78 VTLRVLCREGVRWRVMAIQDFKPFENLRLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGH----TWE  153 (214)
T ss_dssp             EEEEEEECCTTSCEEEEEEEECGGGSBCCCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTS----CST
T ss_pred             ccceeccccccceeeeeecccccccccCCCCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCC----Chh
Confidence            22100   00 001111211234      899999999888789999999987432  347899999997631    231


Q ss_pred             cccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC----CCCCccceEEeecCC
Q psy8774         236 QKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG----LGRLSGKVTVKVKPE  311 (427)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G----~g~~s~~~~~~t~~~  311 (427)
                      ...                         ........+++.|.+|.|++.|.|+|||....|    .|.+|.++.+.|.+.
T Consensus       154 ~~~-------------------------~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~  208 (214)
T 2b5i_B          154 EAP-------------------------LLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA  208 (214)
T ss_dssp             TSC-------------------------CEEECSCCCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred             eee-------------------------eeeecccceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence            100                         112234567899999999999999999998644    588899999998554

>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.14  E-value=2.7e-10  Score=86.52  Aligned_cols=88  Identities=20%  Similarity=0.262  Sum_probs=67.5

Q ss_pred             ccCCCCCceEEEeee--CcEEEEEeeeCCC---CCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccc
Q psy8774         184 DMVRAPLGVKALATS--DQSVEVWWKPVPA---GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVE  258 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~--~~si~v~W~~p~~---~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (427)
                      ..|.+|.++.+....  .+++.|+|++|..   .++.+..|+|.|+..+.   ..|                        
T Consensus         6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~---~~w------------------------   58 (109)
T 1uc6_A            6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLIL---DQW------------------------   58 (109)
T ss_dssp             CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSS---CCC------------------------
T ss_pred             EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCC---CCc------------------------
Confidence            357899999998764  4899999999974   35678999999998732   233                        


Q ss_pred             ccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccce
Q psy8774         259 DLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV  304 (427)
Q Consensus       259 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~  304 (427)
                           ........+++.|.+|+|++.|.|+|+|.+. |.|.+|+..
T Consensus        59 -----~~~~~~~~~~~~l~~L~p~t~Y~~~VRa~~~-g~g~wS~WS   98 (109)
T 1uc6_A           59 -----QHVELSNGTAHTITDAYAGKEYIIQVAAKDN-EIGTWSDWS   98 (109)
T ss_dssp             -----CCEEESSCSEEEETTCCSSSCEEEEEECCBS-SSCCCCCCC
T ss_pred             -----EEEecccCCEEEEeCCCCCCEEEEEEEEEeC-CCCCcCcCC
Confidence                 2222345678999999999999999999985 776666543

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.12  E-value=1.7e-10  Score=85.18  Aligned_cols=79  Identities=19%  Similarity=0.321  Sum_probs=63.6

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccc--eeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLK--ENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRY   80 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~   80 (427)
                      .+++++++.|+|++|.   +.+.+|+|+|+..++...  ........+++.+.+|.||+.|.|+|+|.+..|.|.+....
T Consensus        11 ~~~~~~si~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~   87 (94)
T 1j8k_A           11 TDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGT   87 (94)
T ss_dssp             EEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSSCCCCCEEEE
T ss_pred             EeecCCEEEEEEcCCC---CCcceEEEEEEeCCCCCceEEecCCCCccEEEeCCCCCCCEEEEEEEEEcCCCcCCCEEeE
Confidence            4567899999999984   678999999987654322  11124567899999999999999999999999999887777


Q ss_pred             EeCC
Q psy8774          81 YTTP   84 (427)
Q Consensus        81 ~~t~   84 (427)
                      +.|.
T Consensus        88 ~~T~   91 (94)
T 1j8k_A           88 QSTA   91 (94)
T ss_dssp             EECC
T ss_pred             EEec
Confidence            7764

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.4e-11  Score=91.83  Aligned_cols=84  Identities=23%  Similarity=0.461  Sum_probs=67.9

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce--EEEeeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--IHRNTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      ++.+|.+|++...+.+++.|+|++|.     +.+.+|.|+|+.......+  .......+++.|.+|.|++.|.|+|+|.
T Consensus         7 ~p~~P~~l~v~~~t~~si~lsW~~p~-----g~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~   81 (105)
T 2ekj_A            7 GRSPPSNLALASETPDSLQVSWTPPL-----GRVLHYWLTYAPASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAI   81 (105)
T ss_dssp             TCCCCEEEEEEEEETTEEEEEEECCS-----SCCSBBCBBCCCTTSCSCCCCBCCBTTSSEEEECSCCSSCCCBCBBCBB
T ss_pred             CCCCCCceEEEeCCCCEEEEEEeCCC-----CcceEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence            44679999999999999999999983     6889999999876432222  2223457999999999999999999999


Q ss_pred             eCCCCCCCCCC
Q psy8774         166 TKAGPGPWSPK  176 (427)
Q Consensus       166 ~~~g~~~~s~~  176 (427)
                      +..|.|..+..
T Consensus        82 ~~~g~g~~s~~   92 (105)
T 2ekj_A           82 YAAGRSEAVSA   92 (105)
T ss_dssp             CSSCBCCCBCC
T ss_pred             eCCccCCcccc
Confidence            99998866543

>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=99.10  E-value=1.1e-09  Score=83.23  Aligned_cols=90  Identities=19%  Similarity=0.278  Sum_probs=68.0

Q ss_pred             CCCCCCeeeEEEeec--CCEEEEEeeCCCC-CCCCcceeEEEEEEEEccCCCceE-EEeeeeeEEEEccCCCCcEEEEEE
Q psy8774          87 PPTGPPANISHHFQT--PDVVCITWDPPLR-THRNGQIVLYNVKFHKKIDANNVI-HRNTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~--~~~v~v~W~~p~~-~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      +.+.||.++.+....  .+.+.|+|++|.. .+.++.+..|.|+|+..+.. .+. ......+++.|.+|.|++.|.|+|
T Consensus         6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~-~w~~~~~~~~~~~~l~~L~p~t~Y~~~V   84 (109)
T 1uc6_A            6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILD-QWQHVELSNGTAHTITDAYAGKEYIIQV   84 (109)
T ss_dssp             CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSC-CCCCEEESSCSEEEETTCCSSSCEEEEE
T ss_pred             EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCC-CcEEEecccCCEEEEeCCCCCCEEEEEE
Confidence            455689999988754  5899999999963 23456788999999987433 232 223457899999999999999999


Q ss_pred             EEeeCCCCCCCCCCeE
Q psy8774         163 QAITKAGPGPWSPKLS  178 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~~  178 (427)
                      +|.+. |.|.+|+...
T Consensus        85 Ra~~~-g~g~wS~WS~   99 (109)
T 1uc6_A           85 AAKDN-EIGTWSDWSV   99 (109)
T ss_dssp             ECCBS-SSCCCCCCCE
T ss_pred             EEEeC-CCCCcCcCCC
Confidence            99985 7776665544

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1

Probab=99.09  E-value=3.8e-09  Score=92.55  Aligned_cols=170  Identities=7%  Similarity=0.111  Sum_probs=108.2

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecC--ccceeEe-----ecCcceEEEc--CCCCCceEEEEEEEEeccCcCccc
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREH--TLKENLV-----NSKNMSFLIT--NLERGVEYEFRIAGQNHIGYGQET   77 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~--~~~~~~~-----~~~~~~~~~~--~L~p~t~Y~~~V~a~~~~g~~~~~   77 (427)
                      ...+..+|++...  .....|.+.|+..+.  ..+....     ......|.+.  .+.....|.|.|.+  ..|.....
T Consensus        50 ~~~l~CtW~~g~~--~~~t~y~l~y~~~~~~~~~~~~C~~y~~~~g~~~~C~f~~~~~~~~~~y~i~V~~--~~g~~~s~  125 (247)
T 2erj_C           50 VEYMNCTWQSSSE--PQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD--PREPRRQA  125 (247)
T ss_dssp             TSEEEEECCTTSS--SSCCCCEEEEEESSSSCCCCEECCSEEESSSSEEEEEEEGGGCCTTSCEEEEEEC--SSCTTCEE
T ss_pred             CCEEEEEEcCCCC--CCCeeEEEEEEECCCCCCcceeCCCccccCCcceEEEeCCCCcceeeEEEEEEEE--CCCccccc
Confidence            4689999998752  223678888865432  2232221     1222355554  45557778888853  33333222


Q ss_pred             ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe-eeeeEEEEccCCCCc
Q psy8774          78 VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-TTQTKAVFSNLEEGI  156 (427)
Q Consensus        78 ~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t  156 (427)
                      ...+.....+-+.||.+|.+.......+.|+|++|..    .....|.|+|+... ...+.... ...+.+.|.+|.|++
T Consensus       126 ~~~~~~~~iVkP~PP~nl~v~~~~~~~l~l~W~~P~~----~~~L~Yevry~~~~-~~~W~~~~~~~~~~~~l~~L~p~~  200 (247)
T 2erj_C          126 TQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL----NHCLEHLVQYRTDW-DHSWTEQSVDYRHKFSLPSVDGQK  200 (247)
T ss_dssp             EEEECGGGSEECCCCEEEEEEESSSSCEEEEEECSSC----CTTEEEEEEEECSS-CSSCEEEEECSSCEEEESCCCTTS
T ss_pred             eEEEchhHeEEeCCCCeEEEEECCCCcEEEEECCCCC----CCcEEEEEEEeeCC-CCCCEEEecCCceEEEecCCCCCC
Confidence            3334444444457899999988777899999999842    23458999999763 33454444 336889999999999


Q ss_pred             EEEEEEEEeeCCC------CCCCCCCeEEEccccc
Q psy8774         157 EYSAEVQAITKAG------PGPWSPKLSLMTARDM  185 (427)
Q Consensus       157 ~Y~~~V~a~~~~g------~~~~s~~~~~~t~~~~  185 (427)
                      .|.|+|||....|      .|.+|.++.+.+....
T Consensus       201 ~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~~  235 (247)
T 2erj_C          201 RYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTSK  235 (247)
T ss_dssp             CEEEEEEEEECSSSCCCCCCCCCCCCEEECC----
T ss_pred             EEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCCC
Confidence            9999999998542      3467778888774443

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}

Probab=99.09  E-value=1.6e-09  Score=81.02  Aligned_cols=90  Identities=12%  Similarity=0.131  Sum_probs=67.0

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAG  169 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g  169 (427)
                      .+|.+|++...+.+++.|+|.++.  ..++.+..|+|.|...  .. ........+++.|.+|.|++.|.|.|+|.....
T Consensus         9 s~v~~l~v~~~t~~Sv~LsW~~p~--~~~~~i~~Y~v~~~~~--~~-~~~~~~~~t~~~i~gL~PgT~Y~~~V~A~~~~~   83 (104)
T 2dle_A            9 IQVFDVTAVNISATSLTLIWKVSD--NESSSNYTYKIHVAGE--TD-SSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDI   83 (104)
T ss_dssp             CBEEEEEEEEECSSCEEEEEEESC--STTCCSCEEEEEEECS--SC-EEEEEESSSEEECCSCCSSCEEEEEEEEESSSC
T ss_pred             CCCceEEEEEeecCEEEEEEcCCC--CCCCceEEEEEEEECC--CC-eEEEcCCCCEEEECCCCCCCEEEEEEEEEECCc
Confidence            568899999999999999999773  4455667899999854  22 334445688999999999999999999995443


Q ss_pred             CCCCCCCeEEEccccc
Q psy8774         170 PGPWSPKLSLMTARDM  185 (427)
Q Consensus       170 ~~~~s~~~~~~t~~~~  185 (427)
                      .+ .+..+.+.|..++
T Consensus        84 ~~-~p~~~~~~T~p~p   98 (104)
T 2dle_A           84 EG-TPGFLQVHTPPVP   98 (104)
T ss_dssp             CC-BCEEEEEECCCCS
T ss_pred             cc-CCeeEEEEccCCC
Confidence            33 4445556665433

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*

Probab=99.09  E-value=4e-09  Score=89.49  Aligned_cols=166  Identities=8%  Similarity=0.125  Sum_probs=104.4

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecC--ccceeE-----eecCcceEEEcC--CCCCceEEEEEEEEeccCcCccc
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREH--TLKENL-----VNSKNMSFLITN--LERGVEYEFRIAGQNHIGYGQET   77 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~--~~~~~~-----~~~~~~~~~~~~--L~p~t~Y~~~V~a~~~~g~~~~~   77 (427)
                      ...+..+|++..  ......|.+.|+....  ..+...     .......+.+..  +.....|.|.|.+  ..|.....
T Consensus        12 ~~~~~C~W~~~~--~~~~~~y~l~y~~~~~~~~~~~~C~~y~~~~~~~~~C~~~~~~~~~~~~~~i~v~~--~~g~~~s~   87 (199)
T 2b5i_C           12 VEYMNCTWQSSS--EPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD--PREPRRQA   87 (199)
T ss_dssp             TTEEEEECCCCS--SSSCCCCEEEEEETTSSSCCCEECSSEEEETTEEEEEEEEGGGCCTTSCEEEEEEC--SSCTTCEE
T ss_pred             CcEEEEEecCCC--cCCCceEEEEEEECCCCCCccccCCCccccCCceeEEEECCcccccceEEEEEEEe--CCcceecc
Confidence            468999999875  1223578888875431  222222     112223455544  4456678887753  33332222


Q ss_pred             ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEee-eeeEEEEccCCCCc
Q psy8774          78 VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT-TQTKAVFSNLEEGI  156 (427)
Q Consensus        78 ~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t  156 (427)
                      ...+.....+-+.||.+|.+.......+.|+|++|.   .. ....|.|+|+... +..+..... ..+.+.|.+|.|++
T Consensus        88 ~~~~~~~~iVkP~pP~~l~~~~~~~~~l~l~W~~p~---~~-~~l~yev~y~~~~-~~~w~~~~~~~~~~~~l~~l~p~~  162 (199)
T 2b5i_C           88 TQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRF---LN-HCLEHLVQYRTDW-DHSWTEQSVDYRHKFSLPSVDGQK  162 (199)
T ss_dssp             EEEECGGGSEECCCCEEEEEEEEETTEEEEEEECSS---CS-TTCEEEEEEEETT-CSSCEEEEECSSCEEEECSCCTTS
T ss_pred             eEEEchHHceecCCCcEEEEEECCCCCEEEEECCCC---CC-CceEEEEEEeecC-CcccEEEeccCceEEEecCCCCCc
Confidence            334444444445789999998877789999999984   12 3348999999863 334544433 36889999999999


Q ss_pred             EEEEEEEEeeCCC---C---CCCCCCeEEEc
Q psy8774         157 EYSAEVQAITKAG---P---GPWSPKLSLMT  181 (427)
Q Consensus       157 ~Y~~~V~a~~~~g---~---~~~s~~~~~~t  181 (427)
                      .|.|+|||....|   .   |.+|.++.+.+
T Consensus       163 ~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t  193 (199)
T 2b5i_C          163 RYTFRVRSRFNPLCGSAQHWSEWSHPIHWGS  193 (199)
T ss_dssp             CEEEEEEEECCSSSCCCCCCCCCCCCEEC--
T ss_pred             EEEEEEEEeccCCcCcCCeECCCCCCEEecC
Confidence            9999999998542   2   35666666655

>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*

Probab=99.07  E-value=1.6e-08  Score=91.82  Aligned_cols=171  Identities=10%  Similarity=-0.001  Sum_probs=102.2

Q ss_pred             eeeEEEeecCC-EEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE-Ee--eeeeE-----------E--EEccCCCC
Q psy8774          93 ANISHHFQTPD-VVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH-RN--TTQTK-----------A--VFSNLEEG  155 (427)
Q Consensus        93 ~~~~~~~~~~~-~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~-~~--~~~~~-----------~--~i~~L~p~  155 (427)
                      .++.+...+.. .+.++|.+..  + ......|...+. . .+..... ..  ....+           +  .+..+-|.
T Consensus       105 ~~lsC~~~~~~~~~~C~W~pg~--~-~~l~~~~~~~r~-~-~~~~~~~C~~~~~~~~~c~v~~~~~~~~~~c~~~~~cp~  179 (306)
T 3d85_D          105 TFLRCEAKNYSGRFTCWWLTTI--S-TDLTFSVKSSRG-S-SDPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPA  179 (306)
T ss_dssp             CCCEEEBSSSSSEEEEEEEESC--C-SSEEEEEEEEEC-S-SSCEEEEECCCEEEEEEEC--CEEEEEEEEEEETTCCTT
T ss_pred             CcceEEcCCcccCcEEEecCCC--C-CceeEEEEEEec-C-CCCcceECCCCCCCccceeecCccccceeeeeecccccc
Confidence            37777765544 9999999874  2 122334544321 1 1111111 10  11111           1  23444455


Q ss_pred             ----cEEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeC-cEEEEEeeeCCCCCC----ceeEEEEEEEe
Q psy8774         156 ----IEYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSD-QSVEVWWKPVPAGRG----KILGYQIFYTM  225 (427)
Q Consensus       156 ----t~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~-~si~v~W~~p~~~~g----~i~~Y~I~~~~  225 (427)
                          ..|.|+|.|.|..|..  +....+.. ....|.+|.+|++..... ..+.|+|++|...+.    ....|+|+|+.
T Consensus       180 ~~~~~~y~~~V~A~n~lg~~--s~~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~  257 (306)
T 3d85_D          180 AEESLPIEVMVDAVHKLKYE--QYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQG  257 (306)
T ss_dssp             SCCCSCEEEEEEEEETTEEE--EEEEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEEC
T ss_pred             ccccEEEEEEEEEEccCCcc--ccceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEE
Confidence                4899999999987753  22334432 345678999999987544 799999999874432    34799999987


Q ss_pred             cccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceE
Q psy8774         226 TAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT  305 (427)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~  305 (427)
                      .+.   ..+                             ........+++.|.   +++.|.|+|+|.+..|.|.+|+...
T Consensus       258 ~~~---~~~-----------------------------~~~~~~~~ts~~l~---~~~~Y~vqVRa~~~~~~G~WSeWS~  302 (306)
T 3d85_D          258 KSK---REK-----------------------------KDRVFTDKTSATVI---CRKNASISVRAQDRYYSSSWSEWAS  302 (306)
T ss_dssp             C--------------------------------------CEEEESSSEEEEC---CCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred             CCC---Ccc-----------------------------EEEeeccccEEEEe---CCCeEEEEEEeccCCCCCCCCCCCC
Confidence            632   222                             11122334566663   5999999999999888888887643

>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*

Probab=99.06  E-value=1.2e-08  Score=87.09  Aligned_cols=172  Identities=9%  Similarity=0.014  Sum_probs=109.8

Q ss_pred             cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE
Q psy8774         101 TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS  178 (427)
Q Consensus       101 ~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~  178 (427)
                      ...++++.|+++..     ....|.+.++..-.........  .....+...+|.-.+.+.|.|.+    |.. .|....
T Consensus        35 ~~~~~tc~~~~~~~-----~~~~~~~~~~~~~~~~~c~~~~~~~~~y~~~~~~~~l~~~~~i~V~l----G~~-~S~~~~  104 (223)
T 3up1_A           35 SQHSLTCAFEDPDV-----NTTNLEFEICGALVEVKCLNFRKLQEIYFIETKKFLLIGKSNICVKV----GEK-SLTCKK  104 (223)
T ss_dssp             TEEEEEEEESSTTC-----CCTTEEEEEESSBBSCSEEECEEETTEEEEEESCBCCSSEEEEEEEE----TTE-EEEEEE
T ss_pred             ceEEEEEecCCCCC-----CCCceEEEEecccccccccccccccceEEeecCCEEEEeccEEEEEc----CCc-eeccEE
Confidence            45678899998842     2334666666432211111111  22444556778888888888873    332 345555


Q ss_pred             EEc-ccccCCCCCceEEEeee-CcEEEEEeeeCCCCCC--ceeEEEEEEEecccccccccccccccccccccceeEEeee
Q psy8774         179 LMT-ARDMVRAPLGVKALATS-DQSVEVWWKPVPAGRG--KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTM  254 (427)
Q Consensus       179 ~~t-~~~~p~~p~~l~~~~~~-~~si~v~W~~p~~~~g--~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (427)
                      +.. ....|.||.++.+.... ...+.|+|.+|...++  ....|+|+|+....  ...|                    
T Consensus       105 f~l~~iVKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~--~~~W--------------------  162 (223)
T 3up1_A          105 IDLTTIVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKD--ENKW--------------------  162 (223)
T ss_dssp             EEGGGSBCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSC--SSCC--------------------
T ss_pred             EEecceEEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCC--CCce--------------------
Confidence            655 44567999999998765 4679999999864333  26799999998621  2233                    


Q ss_pred             cccccccccccccc-CCCCceeccCCCCCCeEEEEEEEEec----cCCCCCccceEEeecCCCCC
Q psy8774         255 TAVEDLDEWSQKSV-PLTESAELTSLEKFTEYAVAVAARTV----NGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       255 ~~~~~~~~~~~~~~-~~~~~~~l~~L~p~t~Y~~~V~a~~~----~G~g~~s~~~~~~t~~~~~P  314 (427)
                               ..... .....+.+.+|.|++.|.|+|||...    ++.|.+|.++.+.|. ..+|
T Consensus       163 ---------~~v~~~~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~-~~~P  217 (223)
T 3up1_A          163 ---------THVNLSSTKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTP-EINN  217 (223)
T ss_dssp             ---------EEEEESSSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECC-CCC-
T ss_pred             ---------EEEEecCceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECC-CCCC
Confidence                     11111 11224557899999999999999985    237888888999984 4444

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.01  E-value=2.2e-09  Score=105.98  Aligned_cols=89  Identities=16%  Similarity=0.244  Sum_probs=73.4

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE-EeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH-RNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      +|.||....+...+.++++|+|.+|. .+++++|.+|.|+++..++. .|.. .....+.+++.+|.+|+.|.|||+|.|
T Consensus         9 ~P~pP~~P~v~~~~~~sv~L~W~~P~-~DGgs~I~~Y~vE~~~~~~~-~W~~v~~~~~t~~~V~~L~~g~~Y~FRV~A~N   86 (573)
T 3uto_A            9 EPEPPRFPIIENILDEAVILSWKPPA-LDGGSLVTNYTIEKREAMGG-SWSPCAKSRYTYTTIEGLRAGKQYEFRIIAEN   86 (573)
T ss_dssp             CCCCCEEEEEEEECSSCEEEEEECCS-CCSSSCCCEEEEEEEESSSC-CCEEEEEESSSEEEECCCCTTCEEEEEEEEEE
T ss_pred             CCccCCCCEEEEeeCCEEEEEECCCC-cCCCCcccEEEEEEEECCCC-ceEEeccccCCEEEeCCCCCCCcEeEEEEEEc
Confidence            55678899999999999999999985 46667999999999988433 3433 335578999999999999999999999


Q ss_pred             CCCCCCCCCCeE
Q psy8774         167 KAGPGPWSPKLS  178 (427)
Q Consensus       167 ~~g~~~~s~~~~  178 (427)
                      ..|.|.+|.+..
T Consensus        87 ~~G~s~PS~~s~   98 (573)
T 3uto_A           87 KHGQSKPCEPTA   98 (573)
T ss_dssp             TTEECCCCCCCC
T ss_pred             CceEcCCcCCCC
Confidence            999987765543

>3og6_B Interleukin 28 receptor, alpha (interferon, lambd receptor); helical bundle, fibronectin type III domain, beta-sandwich, signaling, membrane; HET: BMA NAG; 2.10A {Homo sapiens} PDB: 3og4_B*

Probab=99.00  E-value=5e-08  Score=83.18  Aligned_cols=184  Identities=13%  Similarity=0.111  Sum_probs=118.6

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccC---CCCcEEEEEEE
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNL---EEGIEYSAEVQ  163 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L---~p~t~Y~~~V~  163 (427)
                      +|+++++.+.+ -...|.|+++..  . .....|.|+|........|...    ....+.|.|+++   .....|.+||+
T Consensus         8 ~P~NV~~~S~N-f~~iL~W~p~~~--~-~~~v~YtVqy~~~y~~~~W~~v~~C~~it~t~CDlT~~~~~d~~~~Y~~RVr   83 (226)
T 3og6_B            8 PPQNVTLLSQN-FSVYLTWLPGLG--N-PQDVTYFVAYQSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVR   83 (226)
T ss_dssp             CCEEEEEEEET-TEEEEEEECCSS--C-CSSCEEEEEEECCTTSCCEEECGGGTTBCSSEEECSSCTTCCTTSCBCEEEE
T ss_pred             CCceeEEEEEC-CceEEEECCCCC--C-CCCeEEEEEEEecCCCCCceeCccccCCCCCEEeCCcccccCCccCEEEEEE
Confidence            68999988755 478899998742  1 1344799999832223445432    255789999884   57889999999


Q ss_pred             EeeCCCCCCCCCCeEEEcccc-cCCCCCceEEEeeeCcEEEEEeeeCCCC--CCceeEEEEEEEeccccccccccccccc
Q psy8774         164 AITKAGPGPWSPKLSLMTARD-MVRAPLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTMTAVEDLDEWSQKSIP  240 (427)
Q Consensus       164 a~~~~g~~~~s~~~~~~t~~~-~p~~p~~l~~~~~~~~si~v~W~~p~~~--~g~i~~Y~I~~~~~~~~~~~~~~~~~~~  240 (427)
                      |......+.++....|....+ ...|| .+.+.. .+.+|.|.-..|...  .+.-..|.|.|+..........      
T Consensus        84 A~~g~~~S~W~~s~~F~p~~~t~igPP-~v~v~~-~~~sl~V~it~P~~~~~~~~~l~Y~v~yWk~~s~~k~~~------  155 (226)
T 3og6_B           84 TVSPSSKSPWVESEYLDYLFEVEPAPP-VLVLTQ-TEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLF------  155 (226)
T ss_dssp             EEETTEECCCEECCCBCHHHHCCCCCC-EEEEEE-ETTEEEEEEECCCCTTCCCCCEEEEEEEEETTCSCCEEC------
T ss_pred             EEcCCCccCCeecccccchhhCEeCCC-EEEEEE-cCCEEEEEEECCCcccccCCCcEEEEEEEECCCCCeEEe------
Confidence            998766666655544543222 22444 478765 456888888877532  2456789999998743221111      


Q ss_pred             ccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC---CCCCccceEEeecC
Q psy8774         241 LTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG---LGRLSGKVTVKVKP  310 (427)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G---~g~~s~~~~~~t~~  310 (427)
                                             ..........+.|.. .+++.|+|+|+|.-..+   .|.+|.+..+.|..
T Consensus       156 -----------------------~~~~~~~~~~~~L~~-~~~~~YCv~vqa~~~~~~~k~s~fS~~~C~~~~~  204 (226)
T 3og6_B          156 -----------------------PVTPHGQPVQITLQP-AASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEV  204 (226)
T ss_dssp             -----------------------CCEETTSEEEEECCT-TCCSEEEEEEEEEEESSSEEECCCCCCEEEECCC
T ss_pred             -----------------------eeccCCceeEEEecC-CCCCcEEEEEEEEEecCCCCcCCCCCCEeEeCCC
Confidence                                   000011112356666 89999999999863322   57889888888643

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}

Probab=99.00  E-value=1.9e-08  Score=86.34  Aligned_cols=136  Identities=21%  Similarity=0.229  Sum_probs=98.3

Q ss_pred             eeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCC-CceeEEEEE
Q psy8774         144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGR-GKILGYQIF  222 (427)
Q Consensus       144 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~-g~i~~Y~I~  222 (427)
                      ...+.|.++.......+...|.|..|..  +..+.+. ...+|.+|..+.+. ....++.|+|.+|...+ ..+.+|.|+
T Consensus        75 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~-v~~~P~~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~y~v~  150 (215)
T 3mtr_A           75 ASYLEVTPDSENDFGNYNCTAVNRIGQE--SLEFILV-QADTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAE  150 (215)
T ss_dssp             EEEEEECCCSGGGCEEEEEEEECSSCEE--EEEEEEE-ECCCCCCCEEEEEE-EETTEEEEEEECCSCCCSSCEEEEEEE
T ss_pred             eeEEEEecCChhhCeEEEEEEEECCCce--EEEEEEE-ECCCCCCCcceEEE-EecceEEEEEecCCccCCCceEEEEEE
Confidence            5678899998888888889999887764  2222222 34567888887774 56788999999876444 488999999


Q ss_pred             EEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         223 YTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                      |+..+.   ..|.....                        ..........++|.+|.+++.|.|+|+|.|..|.|.+|.
T Consensus       151 ~~~~~~---~~w~~~~~------------------------~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~  203 (215)
T 3mtr_A          151 WRAVGE---EVWHSKWY------------------------DAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISA  203 (215)
T ss_dssp             EEETTC---CCCEEEEE------------------------EHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCC
T ss_pred             EEECCC---Cccccccc------------------------ccccccccccEEECCCCCCCEEEEEEEEEeCCcccCccc
Confidence            998732   23310000                        000111236788999999999999999999999999999


Q ss_pred             ceEEeecC
Q psy8774         303 KVTVKVKP  310 (427)
Q Consensus       303 ~~~~~t~~  310 (427)
                      .+.++|.|
T Consensus       204 ~~~v~T~p  211 (215)
T 3mtr_A          204 ASEFKTQP  211 (215)
T ss_dssp             CEEEECCC
T ss_pred             ceeeEecc
Confidence            99988854

>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*

Probab=99.00  E-value=1.2e-08  Score=87.09  Aligned_cols=183  Identities=10%  Similarity=-0.003  Sum_probs=105.5

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccC-CCceEEEe--ee--eeEEEEcc--CCCCcEEEEEEEE
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID-ANNVIHRN--TT--QTKAVFSN--LEEGIEYSAEVQA  164 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~-~~~~~~~~--~~--~~~~~i~~--L~p~t~Y~~~V~a  164 (427)
                      +.++.+.......+.+.|++..  ..+ ....|.+.|+...+ .....+..  ..  ...+.+..  +.....|.|.|.+
T Consensus         4 ~~~l~C~~~~~~~~~C~W~~~~--~~~-~~~~~~l~y~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~~~~i~v~~   80 (207)
T 1iar_B            4 LQEPTCVSDYMSISTCEWKMNG--PTN-CSTELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWA   80 (207)
T ss_dssp             EEEEEEEECSSSEEEEEEEESS--CCC-HHHHEEEEEEESSSSCCCEEECCEESSSSEEEEEEECSCCCTTCCEEEEEEE
T ss_pred             CCCCcEEECCCceEEEEecCCC--CCC-CCcCEEEEEEeccCCCCCccCcCccCcccceEEEEeCcccccceEEEEEEEe
Confidence            4588888888899999999874  222 23478888876421 22222211  11  23455544  4566779999865


Q ss_pred             eeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCC---CCceeEEEEEEEeccccccccccccccc
Q psy8774         165 ITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAG---RGKILGYQIFYTMTAVEDLDEWSQKSIP  240 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~---~g~i~~Y~I~~~~~~~~~~~~~~~~~~~  240 (427)
                      .+.     ......+.. ....|.||.+|++....++.+.|+|++|...   ......|+|.|+..+...  ..  ..  
T Consensus        81 ~~~-----~~~~~~f~~~~iVkp~PP~nl~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~--~~--~~--  149 (207)
T 1iar_B           81 GQQ-----LLWKGSFKPSEHVKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPA--DF--RI--  149 (207)
T ss_dssp             TTE-----EEEEEEECGGGSBCCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCS--CE--EE--
T ss_pred             CCc-----ccccccEeeccccccCCCCCeEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCch--hh--ee--
Confidence            321     111222322 3456799999999865567899999998632   124568999999763211  11  00  


Q ss_pred             ccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEec--cC-CCCCccceEEeecC
Q psy8774         241 LTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTV--NG-LGRLSGKVTVKVKP  310 (427)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~--~G-~g~~s~~~~~~t~~  310 (427)
                                            +.........++.+.+|.|++.|.|+|||...  .| .|.+|.++.+.|.+
T Consensus       150 ----------------------~~~~~~~~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~  200 (207)
T 1iar_B          150 ----------------------YNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSY  200 (207)
T ss_dssp             ----------------------EEECSSCCEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC---
T ss_pred             ----------------------eeeecCCcEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCC
Confidence                                  00111222345667799999999999999976  45 77888888888843

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A

Probab=99.00  E-value=1.2e-09  Score=79.88  Aligned_cols=79  Identities=15%  Similarity=0.195  Sum_probs=62.1

Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccc
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKS  267 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (427)
                      --..+++..++.+++.|+|++|.   +.+.+|+|.|.+..+.....                              ....
T Consensus         8 ~~~~l~vt~vt~~S~~lsW~~p~---~~v~~Y~I~y~~~~g~~~~~------------------------------~~~v   54 (95)
T 2h41_A            8 VATSESVTEITASSFVVSWVSAS---DTVSGFRVEYELSEEGDEPQ------------------------------YLDL   54 (95)
T ss_dssp             TTCTTSCCCCGGGCEEEECCCSC---TTEEEEEEEEEETTTCCCCE------------------------------EEEE
T ss_pred             EEEEEEEEEeCCCeEEEEECCCC---CCccEEEEEEEeCCCCCcce------------------------------EEEC
Confidence            34566788889999999999987   89999999999874322111                              1234


Q ss_pred             cCCCCceeccCCCCCCeEEEEEEEEeccCCCC
Q psy8774         268 VPLTESAELTSLEKFTEYAVAVAARTVNGLGR  299 (427)
Q Consensus       268 ~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~  299 (427)
                      .+..++++|.+|.|++.|.|+|.|.+..+.+.
T Consensus        55 ~g~~~s~~l~~L~PgT~Y~V~v~a~~~~~~S~   86 (95)
T 2h41_A           55 PSTATSVNIPDLLPGRKYIVNVYQISEDGEQS   86 (95)
T ss_dssp             ETTCCEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred             CCCccEEEECCCCCCCEEEEEEEEEcCCCccc
Confidence            56788999999999999999999999775543

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}

Probab=98.99  E-value=1.9e-08  Score=91.22  Aligned_cols=132  Identities=22%  Similarity=0.234  Sum_probs=100.0

Q ss_pred             cCcceEEEcC-CCCCceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeE
Q psy8774          45 SKNMSFLITN-LERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL  123 (427)
Q Consensus        45 ~~~~~~~~~~-L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~  123 (427)
                      ....++.+.+ +.+...+.|++.|.|..|...........   .++.+|.++.+.....+.+.|+|.+|. .+.+..+.+
T Consensus       157 ~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~---~~P~~p~~~~~~~~~~~~v~l~w~~p~-~~g~~~i~~  232 (305)
T 2nzi_A          157 RSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA---DVPDPPRGVKVSDVSRDSVNLTWTEPA-SDGGSKITN  232 (305)
T ss_dssp             SSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEE---BCCCCCEEEEEESCCSSCEEEEEECCS-CCSBSCEEE
T ss_pred             CCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEe---cCCCCCCCceeeeccCCEEEEEEcCCc-cCCCCceeE
Confidence            3456788888 99999999999999999876433221111   134568889888889999999999874 344457889


Q ss_pred             EEEEEEEccCCCceEEEe-eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEc
Q psy8774         124 YNVKFHKKIDANNVIHRN-TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       124 Y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t  181 (427)
                      |.|+++... ...|.... .....+.|.+|.+++.|.|+++|.|..|.|.+|......+
T Consensus       233 y~v~~~~~~-~~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~  290 (305)
T 2nzi_A          233 YIVEKCATT-AERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTI  290 (305)
T ss_dssp             EEEEEEETT-SCCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEE
T ss_pred             EEEEEecCC-CCccEECccccCceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEE
Confidence            999998873 23333322 3378899999999999999999999999998887765433

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=98.98  E-value=1.5e-09  Score=107.10  Aligned_cols=90  Identities=16%  Similarity=0.152  Sum_probs=73.8

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCC-CceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGR-GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~-g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      .+|.+|....+..++.+++.|+|.+|..++ ..|.+|.|+++..   ....|                            
T Consensus         8 ~~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~---~~~~W----------------------------   56 (573)
T 3uto_A            8 PEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREA---MGGSW----------------------------   56 (573)
T ss_dssp             CCCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEES---SSCCC----------------------------
T ss_pred             CCCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEEC---CCCce----------------------------
Confidence            357889999999999999999999997554 4899999999987   33455                            


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceE
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT  305 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~  305 (427)
                       ........+++++.+|.+|..|.|||+|.|..|.|.+|.+..
T Consensus        57 -~~v~~~~~t~~~V~~L~~g~~Y~FRV~A~N~~G~s~PS~~s~   98 (573)
T 3uto_A           57 -SPCAKSRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTA   98 (573)
T ss_dssp             -EEEEEESSSEEEECCCCTTCEEEEEEEEEETTEECCCCCCCC
T ss_pred             -EEeccccCCEEEeCCCCCCCcEeEEEEEEcCceEcCCcCCCC
Confidence             333334567899999999999999999999999888876433

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*

Probab=98.98  E-value=6.9e-08  Score=82.63  Aligned_cols=96  Identities=15%  Similarity=0.218  Sum_probs=71.2

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce---EEEeeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV---IHRNTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~---~~~~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      +.||.++++...+.+.+.|+|++|......+.+..|.|.|+..+..-..   .......+++.|.+|.|++.|.|+|||.
T Consensus       106 ~~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~  185 (214)
T 2b5i_B          106 LMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVK  185 (214)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCChheeeeeeecccceEEEeccCCCCCEEEEEEEEe
Confidence            3678999998888789999999985322233467999999987321111   1222447899999999999999999999


Q ss_pred             eCCCC----CCCCCCeEEEcccc
Q psy8774         166 TKAGP----GPWSPKLSLMTARD  184 (427)
Q Consensus       166 ~~~g~----~~~s~~~~~~t~~~  184 (427)
                      ...|.    |.+|.++.+.|...
T Consensus       186 ~~~~~~G~WS~WS~~~~~~T~~~  208 (214)
T 2b5i_B          186 PLQGEFTTWSPWSQPLAFRTKPA  208 (214)
T ss_dssp             ESCCSSCCCCCCCCCEEEECCC-
T ss_pred             eCCCCCCCccCCCCCEEEEcCCC
Confidence            76442    67899999998543

>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}

Probab=98.95  E-value=2.6e-08  Score=85.71  Aligned_cols=182  Identities=12%  Similarity=0.076  Sum_probs=109.3

Q ss_pred             eeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEE----EEccCCCceEEE-----e--eeeeEEEEc--cCCCCcEEE
Q psy8774          93 ANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKF----HKKIDANNVIHR-----N--TTQTKAVFS--NLEEGIEYS  159 (427)
Q Consensus        93 ~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~----~~~~~~~~~~~~-----~--~~~~~~~i~--~L~p~t~Y~  159 (427)
                      .+|.+.......+.++|++...  .   ...+.+.|    +...........     .  .....+.|.  .|..+..|.
T Consensus         2 ~nl~C~~~~~~~ltC~W~~~~~--~---~~~~~~~~~l~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~   76 (219)
T 3tgx_A            2 PDLVCYTDYLQTVICILEMWNL--H---PSTLTLTWQDQYEELKDEATSCSLHRSAHNATHATYTCHMDVFHFMADDIFS   76 (219)
T ss_dssp             CCEEEEECSSSEEEEEEECSSS--S---CCEEEEEECCTTSCCTTSCCEEEEEEEEECSSEEEEEEECCGGGSCTTCEEE
T ss_pred             CCceEEeCCCeEEEEEEECCCC--c---CceEEEEEEccccCCCCcccCCCCccccCCCCCcEEEEEEECccccccceEE
Confidence            3677777778899999998641  1   11333333    221112222221     1  113445554  567788888


Q ss_pred             EEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCC---C--CceeEEEEEEEecccccccc
Q psy8774         160 AEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAG---R--GKILGYQIFYTMTAVEDLDE  233 (427)
Q Consensus       160 ~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~---~--g~i~~Y~I~~~~~~~~~~~~  233 (427)
                      |.|.+.  .|.. .+....+.. ....|.||.++.+..  .+.+.|+|.+|...   +  .....|+|.|+..+.    .
T Consensus        77 v~v~~~--~g~~-~s~~~~f~~~~iVkp~PP~nltv~~--~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~----~  147 (219)
T 3tgx_A           77 VQITDQ--SGQY-SQECGSFLLAESIKPAPPFDVTVTF--SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD----P  147 (219)
T ss_dssp             EEEECT--TSSC-EEEEEEEEGGGCBCCCCCEEEEEEE--SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS----C
T ss_pred             EEEEeC--CCCE-EecCceEeeeeeEEeCCCCceEEEe--CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC----C
Confidence            877543  4432 333444443 345678999999873  57999999998631   1  235789999998731    3


Q ss_pred             cccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC------CCCCccceEEe
Q psy8774         234 WSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG------LGRLSGKVTVK  307 (427)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G------~g~~s~~~~~~  307 (427)
                      |.....  .       .             ..........+.+.+|.|++.|.|+|||....|      .|.+|.++.+.
T Consensus       148 W~~~~~--~-------~-------------~~~~~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~  205 (219)
T 3tgx_A          148 WAVSPR--R-------K-------------LISVDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQ  205 (219)
T ss_dssp             TTSCCE--E-------E-------------EECSSCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEE
T ss_pred             ceeccc--c-------e-------------eEecCCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEE
Confidence            310000  0       0             001112344677889999999999999998753      45668888888


Q ss_pred             ecC
Q psy8774         308 VKP  310 (427)
Q Consensus       308 t~~  310 (427)
                      |.+
T Consensus       206 T~~  208 (219)
T 3tgx_A          206 TQS  208 (219)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            844

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}

Probab=98.95  E-value=4.3e-08  Score=84.08  Aligned_cols=131  Identities=12%  Similarity=0.120  Sum_probs=98.3

Q ss_pred             CcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEE
Q psy8774          46 KNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYN  125 (427)
Q Consensus        46 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~  125 (427)
                      ....+.|.++.......|.+.|.|..|...... ....  ..++.+|..+.+. ....++.|+|.+|. .+.+.++.+|.
T Consensus        74 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~-~l~v--~~~P~~p~~~~~~-~~~~~~~l~w~~p~-~~~~~pi~~y~  148 (215)
T 3mtr_A           74 SASYLEVTPDSENDFGNYNCTAVNRIGQESLEF-ILVQ--ADTPSSPSIDQVE-PYSSTAQVQFDEPE-ATGGVPILKYK  148 (215)
T ss_dssp             TEEEEEECCCSGGGCEEEEEEEECSSCEEEEEE-EEEE--CCCCCCCEEEEEE-EETTEEEEEEECCS-CCCSSCEEEEE
T ss_pred             CeeEEEEecCChhhCeEEEEEEEECCCceEEEE-EEEE--CCCCCCCcceEEE-EecceEEEEEecCC-ccCCCceEEEE
Confidence            456788999999999999999999988663222 1111  2244567777764 56678999999774 34445888999


Q ss_pred             EEEEEccCCCceEEEe------eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         126 VKFHKKIDANNVIHRN------TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       126 v~~~~~~~~~~~~~~~------~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      |+|+..+.. .+....      .....+.|.+|.+++.|.|+|+|.|..|.|.+|..+.++|.
T Consensus       149 v~~~~~~~~-~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~  210 (215)
T 3mtr_A          149 AEWRAVGEE-VWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ  210 (215)
T ss_dssp             EEEEETTCC-CCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECC
T ss_pred             EEEEECCCC-cccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEec
Confidence            999987432 333222      11388999999999999999999999999999999998873

>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*

Probab=98.92  E-value=1e-08  Score=92.99  Aligned_cols=122  Identities=17%  Similarity=0.156  Sum_probs=79.5

Q ss_pred             EcCCCCC----ceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEee-cCCEEEEEeeCCCCCCCCc----cee
Q psy8774          52 ITNLERG----VEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQ-TPDVVCITWDPPLRTHRNG----QIV  122 (427)
Q Consensus        52 ~~~L~p~----t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~-~~~~v~v~W~~p~~~~~~~----~i~  122 (427)
                      +..+.|.    ..|.|+|.|.|..|..... ..+.....+.|.||.++.+... .+..+.|+|++|.  ..+.    ...
T Consensus       173 ~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~-~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~--~~~~p~~~~~L  249 (306)
T 3d85_D          173 EDSACPAAEESLPIEVMVDAVHKLKYEQYT-SSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPD--TWSTPHSYFSL  249 (306)
T ss_dssp             ETTCCTTSCCCSCEEEEEEEEETTEEEEEE-EEECHHHHBCCCCCEEEEEEEC----CEEEEEECCT--TSCSCTTTSCE
T ss_pred             eccccccccccEEEEEEEEEEccCCccccc-eEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCC--CCcCCCceeeE
Confidence            3455565    4899999999988854332 3333222334458999998874 3478999999985  2222    236


Q ss_pred             EEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEE
Q psy8774         123 LYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL  179 (427)
Q Consensus       123 ~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~  179 (427)
                      .|+|+|+..+....+.......+++.|   .+++.|.|+|+|.+..|.|.+|+....
T Consensus       250 ~Y~vryr~~~~~~~~~~~~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS~~  303 (306)
T 3d85_D          250 TFCVQVQGKSKREKKDRVFTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWASV  303 (306)
T ss_dssp             EEEEEEECC------CEEEESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCEEE
T ss_pred             EEEEEEEECCCCccEEEeeccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCCCC
Confidence            899999977432222223344566666   469999999999998888888876543

>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}

Probab=98.90  E-value=1.6e-08  Score=75.33  Aligned_cols=91  Identities=19%  Similarity=0.185  Sum_probs=68.9

Q ss_pred             CCCCCeeeEEEee-cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe-eeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQ-TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-TTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~-~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      +|.+|.+|.+... ....+.|+|++..      ...+|.|+.....++....... ...+++...+|.+|+.|.|+|+|+
T Consensus         4 ~P~aP~~l~a~~~~~~~~v~LsW~~~~------~~~~Y~VyR~~~~~~~~~~i~~~~~~tsy~d~~l~~g~~Y~Y~V~Av   77 (103)
T 3mpc_A            4 APAFPTGLSAVLDSSGNTANLTWNAAP------GANSYNVKRSTKSGGPYTTIATNITSTNYTDTGVATGTKYYYVVSAV   77 (103)
T ss_dssp             CCCCCEEEEEEECTTSCCEEEEEECCT------TCSEEEEEEESSTTCCCEEEEEEECSSEEEETTCCTTCCCEEEEEEE
T ss_pred             CCCCCceeEEEEeCCCCEEEEEEECCC------CCCEEEEEEecCCCCCcEEEeecCCCCEEEECCCCCCCEEEEEEEEE
Confidence            4467889998875 4679999999862      3679999776542222222222 457899999999999999999999


Q ss_pred             eCCCCCCCCCCeEEEcccc
Q psy8774         166 TKAGPGPWSPKLSLMTARD  184 (427)
Q Consensus       166 ~~~g~~~~s~~~~~~t~~~  184 (427)
                      |..|.|..|..+.+++...
T Consensus        78 n~~geS~~S~~vs~~~~~~   96 (103)
T 3mpc_A           78 SNGVETLNSAEAILQYPKL   96 (103)
T ss_dssp             ETTEECCCCCCEECBCCCC
T ss_pred             eCcCCcCCCccEEEECCcc
Confidence            9888888898888877543

>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*

Probab=98.89  E-value=8.3e-08  Score=81.81  Aligned_cols=173  Identities=17%  Similarity=0.222  Sum_probs=97.0

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecC-ccceeEe--ecC--cceEEE--cCCCCCceEEEEEEEEeccCcCcccce
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREH-TLKENLV--NSK--NMSFLI--TNLERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~~--~~~--~~~~~~--~~L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      ...+...|++..+.+ ....|.+.|+...+ ..+....  ...  ...|.+  ..+.....|.|.|.+.+..    ....
T Consensus        14 ~~~~~C~W~~~~~~~-~~~~~~l~y~~~~~~~~~~~C~~~~~~~~~~~C~~~~~~~~~~~~~~i~v~~~~~~----~~~~   88 (207)
T 1iar_B           14 MSISTCEWKMNGPTN-CSTELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQL----LWKG   88 (207)
T ss_dssp             SSEEEEEEEESSCCC-HHHHEEEEEEESSSSCCCEEECCEESSSSEEEEEEECSCCCTTCCEEEEEEETTEE----EEEE
T ss_pred             CceEEEEecCCCCCC-CCcCEEEEEEeccCCCCCccCcCccCcccceEEEEeCcccccceEEEEEEEeCCcc----cccc
Confidence            457899999976432 23578888876421 2222221  111  223444  4456677899998653221    1123


Q ss_pred             EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCC-CCCcceeEEEEEEEEccCCCceEEEe--ee--eeEEEEccCCC
Q psy8774          80 YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRT-HRNGQIVLYNVKFHKKIDANNVIHRN--TT--QTKAVFSNLEE  154 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~-~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~--~~~~~i~~L~p  154 (427)
                      .+.....+-+.||.+|.+....+..+.|+|++|... ........|.|+|+............  ..  ...+.+.+|.|
T Consensus        89 ~f~~~~iVkp~PP~nl~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p  168 (207)
T 1iar_B           89 SFKPSEHVKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKS  168 (207)
T ss_dssp             EECGGGSBCCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSCCEEEECC-----
T ss_pred             cEeeccccccCCCCCeEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchhheeeeeecCCcEEEEEHHHCCC
Confidence            333344455678999998854566899999988531 11123458999999874332222121  22  34455578999


Q ss_pred             CcEEEEEEEEeeC--CC-CCCCCCCeEEEcccc
Q psy8774         155 GIEYSAEVQAITK--AG-PGPWSPKLSLMTARD  184 (427)
Q Consensus       155 ~t~Y~~~V~a~~~--~g-~~~~s~~~~~~t~~~  184 (427)
                      |+.|.++|||...  .| .|.+|.++.+.+...
T Consensus       169 ~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~  201 (207)
T 1iar_B          169 GISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR  201 (207)
T ss_dssp             CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred             CCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence            9999999999965  34 457888888887443

>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}

Probab=98.88  E-value=7e-09  Score=77.34  Aligned_cols=88  Identities=15%  Similarity=0.153  Sum_probs=67.3

Q ss_pred             cCCCCCceEEEee-eCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         185 MVRAPLGVKALAT-SDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       185 ~p~~p~~l~~~~~-~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      +|.+|.+|.+... +.+++.|+|+++.    ...+|.|+......   ..+                             
T Consensus         4 ~P~aP~~l~a~~~~~~~~v~LsW~~~~----~~~~Y~VyR~~~~~---~~~-----------------------------   47 (103)
T 3mpc_A            4 APAFPTGLSAVLDSSGNTANLTWNAAP----GANSYNVKRSTKSG---GPY-----------------------------   47 (103)
T ss_dssp             CCCCCEEEEEEECTTSCCEEEEEECCT----TCSEEEEEEESSTT---CCC-----------------------------
T ss_pred             CCCCCceeEEEEeCCCCEEEEEEECCC----CCCEEEEEEecCCC---CCc-----------------------------
Confidence            5789999999876 4679999999975    37999997654311   112                             


Q ss_pred             cccc-cCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         264 SQKS-VPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       264 ~~~~-~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      .... ....++|+..+|.+|+.|.|+|+|+|..|+|..|..+.+++
T Consensus        48 ~~i~~~~~~tsy~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~   93 (103)
T 3mpc_A           48 TTIATNITSTNYTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY   93 (103)
T ss_dssp             EEEEEEECSSEEEETTCCTTCCCEEEEEEEETTEECCCCCCEECBC
T ss_pred             EEEeecCCCCEEEECCCCCCCEEEEEEEEEeCcCCcCCCccEEEEC
Confidence            1111 12457899999999999999999999888999999887775

>1fyh_B Interferon-gamma receptor alpha chain; cytokine-receptor complex, fibronectin type-III, immune system; 2.04A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1fg9_C 1jrh_I

Probab=98.81  E-value=5e-07  Score=77.81  Aligned_cols=189  Identities=11%  Similarity=0.101  Sum_probs=119.3

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccC-CCceE--EEeeeeeEEEEccCC--CCcEEEEEEEE
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID-ANNVI--HRNTTQTKAVFSNLE--EGIEYSAEVQA  164 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~-~~~~~--~~~~~~~~~~i~~L~--p~t~Y~~~V~a  164 (427)
                      .+|.++++.+.+ -...|.|+++..  .  ....|.|+|..-+. ...|.  +.....+.|.|+++.  ....|.+||+|
T Consensus        13 p~P~NV~~~S~N-f~~iL~W~p~~~--~--~~~~YtVqy~~y~~~~~~W~~~C~~it~~~CDlT~~~~d~~~~y~~RVrA   87 (229)
T 1fyh_B           13 PTPTNVTIESYN-MNPIVYWEYQIM--P--QVPVFTVEVKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRVKA   87 (229)
T ss_dssp             CCCEEEEEECBS-SCCEEEEECCCC--S--SCCEEEEEEEETTCSSSCCEEEEEEESSSEEECGGGCCSTTSCEEEEEEE
T ss_pred             CCCcEEEEEEEC-CeeEEEECCCCC--C--CCeEEEEEEEeccCccchhHhhCcCCCCCEEeCCCccccCceeEEEEEEE
Confidence            368999988754 467799998852  1  24689999987632 12343  334557899998854  67789999999


Q ss_pred             eeCCCCCCCCCCeEEEccc-ccCCCCCceEEEeeeCcEEEEEeeeCCCC-CC---c----------eeEEEEEEEecccc
Q psy8774         165 ITKAGPGPWSPKLSLMTAR-DMVRAPLGVKALATSDQSVEVWWKPVPAG-RG---K----------ILGYQIFYTMTAVE  229 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~~t~~-~~p~~p~~l~~~~~~~~si~v~W~~p~~~-~g---~----------i~~Y~I~~~~~~~~  229 (427)
                      ..+...+.++....|.... ....|| .+.+... +.+|.|.-.+|... +|   .          ...|.|.++.....
T Consensus        88 ~~g~~~S~w~~s~~F~p~~~t~igPP-~v~l~~~-~~~i~V~i~~P~~~~~g~~~~l~~~~~~~~~~~~Y~v~~~~~~s~  165 (229)
T 1fyh_B           88 RVGQKESAYAKSEEFAVCRDGKIGPP-KLDIRKE-EKQIMIDIFHPSVFVNGDEQEVDYDPETTCYIRVYNVYVRMNGSE  165 (229)
T ss_dssp             EETTEECCCEECCCBCHHHHSBCCCC-EEEEEEC-SSEEEEEEECCGGGC-----------CCSCSEEEEEEEEEETTEE
T ss_pred             EcCCcccCCEeccceeeeeeeEECCC-eEEEEEe-CCEEEEEEeCCCcccCCCcceeeecCcccccceEEEEEEEECCCC
Confidence            9877677666554444422 222444 4777654 56899998887632 11   1          23799999886431


Q ss_pred             cccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEec--cCCCCCccceEEe
Q psy8774         230 DLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTV--NGLGRLSGKVTVK  307 (427)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~--~G~g~~s~~~~~~  307 (427)
                       ...... ...                       ..........+.|.+|.|++.|+|+|++...  .-.|.+|....+.
T Consensus       166 -~~~~~~-~~~-----------------------~~~~~~~~~~~~i~~L~p~t~YCv~v~~~~~~~~k~s~~S~~~Ci~  220 (229)
T 1fyh_B          166 -IQYKIL-TQK-----------------------EDDCDEIQCQLAIPVSSLNSQYCVSAEGVLHVWGVTTEKSKEVCIT  220 (229)
T ss_dssp             -EEEEEE-SSS-----------------------CTTBCSSEEEEEEECCTTCCEEEEEEEEEETTTCCBCCCCCCEEEE
T ss_pred             -eeEEEE-eec-----------------------ccCccccceeEEEeeCCCCCeEEEEEEEEeccCCccCCCCCCEeEe
Confidence             111000 000                       0000011124778999999999999999743  2367788888877


Q ss_pred             ecC
Q psy8774         308 VKP  310 (427)
Q Consensus       308 t~~  310 (427)
                      |.+
T Consensus       221 t~~  223 (229)
T 1fyh_B          221 IFN  223 (229)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            744

>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R*

Probab=98.79  E-value=2.3e-07  Score=78.49  Aligned_cols=180  Identities=14%  Similarity=0.150  Sum_probs=114.2

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccC--CCCcEEEEEEE
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNL--EEGIEYSAEVQ  163 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L--~p~t~Y~~~V~  163 (427)
                      ..++++++.+.+ -.-.|.|+++..  . .....|.|+|..-+ ...|...    ....+.|.|+++  .....|.+||+
T Consensus         6 ~~~qNv~~~S~N-f~~iL~W~p~~~--~-~~~~~YtVqy~~~~-~~~W~~v~~C~~it~t~CDlT~~~~d~~~~Y~~RVr   80 (211)
T 3dlq_R            6 DLLQHVKFQSSN-FENILTWDSGPE--G-TPDTVYSIEYKTYG-ERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVT   80 (211)
T ss_dssp             GTEEEEEEEEET-TEEEEEEEECTT--C-CSSEEEEEEEEETT-CCCCEECTTCSSBSSSEEECTGGGCCTTCCEEEEEE
T ss_pred             cCccccEEEEEC-CeeEEEECCCCC--C-CCCeEEEEEEEECC-CCCceeccccCCCCCCEEeCCcccccCCccEEEEEE
Confidence            457888887754 477899999842  1 24668999999873 2344432    255788999885  46789999999


Q ss_pred             EeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCC----CC---------ceeEEEEEEEecccc
Q psy8774         164 AITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAG----RG---------KILGYQIFYTMTAVE  229 (427)
Q Consensus       164 a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~----~g---------~i~~Y~I~~~~~~~~  229 (427)
                      |..+.+.+.++....|.. ......|| .+.+.. ...+|.|.-.+|...    +|         .-..|.|.|+..+..
T Consensus        81 A~~g~~~S~w~~s~~F~p~~~t~igPP-~v~l~~-~~~~l~V~i~~P~~~~~~~~g~~~sl~di~~~l~Y~V~~~~~~s~  158 (211)
T 3dlq_R           81 AVSAGGRSATKMTDRFSSLQHTTLKPP-DVTCIS-KVRSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTY  158 (211)
T ss_dssp             EEETTSCEEEEECCCBCHHHHCBCCCC-CEEEEE-CSSEEEEEECCCBCSCCC----CCBHHHHCTTCEEEEEEEC----
T ss_pred             EEeCCCcCCceeeeeEEehhcceeCCC-EEEEEE-cCCEEEEEEECCCCccccCCCceeEHHHhcCCcEEEEEEEECCCc
Confidence            998766655544434433 12222444 478765 456999999887632    11         234899999987421


Q ss_pred             cccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEecc--CCCCCccceEEe
Q psy8774         230 DLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN--GLGRLSGKVTVK  307 (427)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~--G~g~~s~~~~~~  307 (427)
                        ...                                .......+.|.+|.|++.|+|+|+++...  ..+.+| ...++
T Consensus       159 --~k~--------------------------------~~~~~~~~~l~~L~p~t~YCv~v~~~~~~~~k~S~~s-~C~~~  203 (211)
T 3dlq_R          159 --QMH--------------------------------LGGKQREYEFFGLTPDTEFLGTIMILVPTWAKESAPY-MCRVK  203 (211)
T ss_dssp             --CEE--------------------------------EEESSSEEEEESCCTTCEEEEEEEEEEGGGTEECCCE-EEEEE
T ss_pred             --EEE--------------------------------EecCCCEEEEccCCCCCcEEEEEEEEEcCCCCCCCCc-EeEEE
Confidence              111                                11233688899999999999999998653  234444 11145


Q ss_pred             ecCC
Q psy8774         308 VKPE  311 (427)
Q Consensus       308 t~~~  311 (427)
                      |.|.
T Consensus       204 t~~~  207 (211)
T 3dlq_R          204 TLPD  207 (211)
T ss_dssp             CCCC
T ss_pred             eCCC
Confidence            6543

>3og6_B Interleukin 28 receptor, alpha (interferon, lambd receptor); helical bundle, fibronectin type III domain, beta-sandwich, signaling, membrane; HET: BMA NAG; 2.10A {Homo sapiens} PDB: 3og4_B*

Probab=98.77  E-value=5.5e-07  Score=76.72  Aligned_cols=170  Identities=12%  Similarity=0.095  Sum_probs=110.3

Q ss_pred             EEEEEeeCCCCCCCcceEeEEEEE-EecCccceeEe---ecCcceEEEcCC---CCCceEEEEEEEEeccCcCcccce-E
Q psy8774           9 TIELVWSQPTQTYGEILGYRVKYG-VREHTLKENLV---NSKNMSFLITNL---ERGVEYEFRIAGQNHIGYGQETVR-Y   80 (427)
Q Consensus         9 sv~l~W~~p~~~~~~i~~Y~v~~~-~~~~~~~~~~~---~~~~~~~~~~~L---~p~t~Y~~~V~a~~~~g~~~~~~~-~   80 (427)
                      .-.|+|+++.... ....|.|+|+ .-+...|....   ....+.|.|+.+   .....|.+||+|..+...+..... .
T Consensus        20 ~~iL~W~p~~~~~-~~v~YtVqy~~~y~~~~W~~v~~C~~it~t~CDlT~~~~~d~~~~Y~~RVrA~~g~~~S~W~~s~~   98 (226)
T 3og6_B           20 SVYLTWLPGLGNP-QDVTYFVAYQSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEY   98 (226)
T ss_dssp             EEEEEEECCSSCC-SSCEEEEEEECCTTSCCEEECGGGTTBCSSEEECSSCTTCCTTSCBCEEEEEEETTEECCCEECCC
T ss_pred             ceEEEECCCCCCC-CCeEEEEEEEecCCCCCceeCccccCCCCCEEeCCcccccCCccCEEEEEEEEcCCCccCCeeccc
Confidence            3568999986333 3457999998 34556787543   667789999884   567889999999987666654322 2


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEee---eeeEEEEccCCCCcE
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT---TQTKAVFSNLEEGIE  157 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t~  157 (427)
                      +........+|| .+.+... ...+.|.-..|......+.-..|.|.|++.+..........   ....+.|.. .|++.
T Consensus        99 F~p~~~t~igPP-~v~v~~~-~~sl~V~it~P~~~~~~~~~l~Y~v~yWk~~s~~k~~~~~~~~~~~~~~~L~~-~~~~~  175 (226)
T 3og6_B           99 LDYLFEVEPAPP-VLVLTQT-EEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHGQPVQITLQP-AASEH  175 (226)
T ss_dssp             BCHHHHCCCCCC-EEEEEEE-TTEEEEEEECCCCTTCCCCCEEEEEEEEETTCSCCEECCCEETTSEEEEECCT-TCCSE
T ss_pred             ccchhhCEeCCC-EEEEEEc-CCEEEEEEECCCcccccCCCcEEEEEEEECCCCCeEEeeeccCCceeEEEecC-CCCCc
Confidence            221112233556 4777654 45888888877433333456689999998854443322111   122456666 89999


Q ss_pred             EEEEEEEe-eCC--CCCCCCCCeEEEcc
Q psy8774         158 YSAEVQAI-TKA--GPGPWSPKLSLMTA  182 (427)
Q Consensus       158 Y~~~V~a~-~~~--g~~~~s~~~~~~t~  182 (427)
                      |.|+|++. ...  -.|.+|.+..+.+.
T Consensus       176 YCv~vqa~~~~~~~k~s~fS~~~C~~~~  203 (226)
T 3og6_B          176 HCLSARTIYTFSVPKYSKFSKPTCFLLE  203 (226)
T ss_dssp             EEEEEEEEEESSSEEECCCCCCEEEECC
T ss_pred             EEEEEEEEEecCCCCcCCCCCCEeEeCC
Confidence            99999985 222  23678888888763

>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R*

Probab=98.76  E-value=2.5e-07  Score=78.31  Aligned_cols=154  Identities=12%  Similarity=0.130  Sum_probs=102.2

Q ss_pred             EEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe---ecCcceEEEcCC--CCCceEEEEEEEEeccCcCcccc-eEEe
Q psy8774           9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV---NSKNMSFLITNL--ERGVEYEFRIAGQNHIGYGQETV-RYYT   82 (427)
Q Consensus         9 sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~~L--~p~t~Y~~~V~a~~~~g~~~~~~-~~~~   82 (427)
                      .-.|.|+++... .....|.|+|+.-+...|....   ....+.|.|+++  .....|.+||+|..+.+.+.... ..+.
T Consensus        19 ~~iL~W~p~~~~-~~~~~YtVqy~~~~~~~W~~v~~C~~it~t~CDlT~~~~d~~~~Y~~RVrA~~g~~~S~w~~s~~F~   97 (211)
T 3dlq_R           19 ENILTWDSGPEG-TPDTVYSIEYKTYGERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVTAVSAGGRSATKMTDRFS   97 (211)
T ss_dssp             EEEEEEEECTTC-CSSEEEEEEEEETTCCCCEECTTCSSBSSSEEECTGGGCCTTCCEEEEEEEEETTSCEEEEECCCBC
T ss_pred             eeEEEECCCCCC-CCCeEEEEEEEECCCCCceeccccCCCCCCEEeCCcccccCCccEEEEEEEEeCCCcCCceeeeeEE
Confidence            346899998632 2467899999987766787653   566788888874  46788999999998777665432 1221


Q ss_pred             CCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCC--C---------cceeEEEEEEEEccCCCceEEEeeeeeEEEEcc
Q psy8774          83 TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHR--N---------GQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSN  151 (427)
Q Consensus        83 t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~--~---------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~  151 (427)
                      .......+|| .+.+.. ....|.|.-.+|.....  +         ..-..|.|.|+..+.+  ..........+.|.+
T Consensus        98 p~~~t~igPP-~v~l~~-~~~~l~V~i~~P~~~~~~~~g~~~sl~di~~~l~Y~V~~~~~~s~--~k~~~~~~~~~~l~~  173 (211)
T 3dlq_R           98 SLQHTTLKPP-DVTCIS-KVRSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTY--QMHLGGKQREYEFFG  173 (211)
T ss_dssp             HHHHCBCCCC-CEEEEE-CSSEEEEEECCCBCSCCC----CCBHHHHCTTCEEEEEEEC------CEEEEESSSEEEEES
T ss_pred             ehhcceeCCC-EEEEEE-cCCEEEEEEECCCCccccCCCceeEHHHhcCCcEEEEEEEECCCc--EEEEecCCCEEEEcc
Confidence            1122333556 477665 45589998887742111  1         1234899999887432  222333457899999


Q ss_pred             CCCCcEEEEEEEEeeC
Q psy8774         152 LEEGIEYSAEVQAITK  167 (427)
Q Consensus       152 L~p~t~Y~~~V~a~~~  167 (427)
                      |.|++.|.++|.+.-.
T Consensus       174 L~p~t~YCv~v~~~~~  189 (211)
T 3dlq_R          174 LTPDTEFLGTIMILVP  189 (211)
T ss_dssp             CCTTCEEEEEEEEEEG
T ss_pred             CCCCCcEEEEEEEEEc
Confidence            9999999999999754

>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.73  E-value=3.1e-08  Score=66.21  Aligned_cols=75  Identities=19%  Similarity=0.191  Sum_probs=63.4

Q ss_pred             EEeeCCCCCCCcceEeEEEEEEecCc-cceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCCCCCC
Q psy8774          12 LVWSQPTQTYGEILGYRVKYGVREHT-LKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPP   88 (427)
Q Consensus        12 l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p   88 (427)
                      ++|++|.  .+.+..|.|.|++.+.. .|..+. +....+|+|.+|.||..|..++.++...|.++.....+.|....+
T Consensus         2 IqWnap~--~shi~~YIL~w~pk~~~~~wKev~IPgh~nSYtIsGLkPGvtYegQLisV~r~g~~EvtrfdfTT~~~~~   78 (89)
T 1q38_A            2 RGSNAPQ--PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTST   78 (89)
T ss_dssp             CCCCCSS--CSSCSEEEEEEEETTTTCCCEEEEECSSSSCCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEECSSSSCC
T ss_pred             ccccCCC--cccceeeEEEEEecCCCCccEEEEcCCccceEEEeccCCCcEEEEEEEeeeecccCCceEEEEEeccCCC
Confidence            5799886  55789999999998765 476666 888999999999999999999999999999887777777766544

>1fyh_B Interferon-gamma receptor alpha chain; cytokine-receptor complex, fibronectin type-III, immune system; 2.04A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1fg9_C 1jrh_I

Probab=98.68  E-value=1.8e-06  Score=74.33  Aligned_cols=169  Identities=10%  Similarity=0.036  Sum_probs=109.0

Q ss_pred             EEEeeCCCCCCCcceEeEEEEEEec--CccceeEe-ecCcceEEEcCCC--CCceEEEEEEEEeccCcCcccce-EEeCC
Q psy8774          11 ELVWSQPTQTYGEILGYRVKYGVRE--HTLKENLV-NSKNMSFLITNLE--RGVEYEFRIAGQNHIGYGQETVR-YYTTP   84 (427)
Q Consensus        11 ~l~W~~p~~~~~~i~~Y~v~~~~~~--~~~~~~~~-~~~~~~~~~~~L~--p~t~Y~~~V~a~~~~g~~~~~~~-~~~t~   84 (427)
                      .|+|+++..  +....|.|+|+.-+  ...|...- ....+.|.|+++.  ....|.+||+|..+...+..+.. .+...
T Consensus        28 iL~W~p~~~--~~~~~YtVqy~~y~~~~~~W~~~C~~it~~~CDlT~~~~d~~~~y~~RVrA~~g~~~S~w~~s~~F~p~  105 (229)
T 1fyh_B           28 IVYWEYQIM--PQVPVFTVEVKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRVKARVGQKESAYAKSEEFAVC  105 (229)
T ss_dssp             EEEEECCCC--SSCCEEEEEEEETTCSSSCCEEEEEEESSSEEECGGGCCSTTSCEEEEEEEEETTEECCCEECCCBCHH
T ss_pred             EEEECCCCC--CCCeEEEEEEEeccCccchhHhhCcCCCCCEEeCCCccccCceeEEEEEEEEcCCcccCCEeccceeee
Confidence            689999864  23478999998755  34676422 6677899998854  67789999999988777654432 22222


Q ss_pred             CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCC------------CcceeEEEEEEEEccCCCceEEEe-----e--eee
Q psy8774          85 EGPPTGPPANISHHFQTPDVVCITWDPPLRTHR------------NGQIVLYNVKFHKKIDANNVIHRN-----T--TQT  145 (427)
Q Consensus        85 ~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~------------~~~i~~Y~v~~~~~~~~~~~~~~~-----~--~~~  145 (427)
                      .....+|| .+.+... ...|.|.-.+|.....            ......|.|.++..+.+.......     .  ...
T Consensus       106 ~~t~igPP-~v~l~~~-~~~i~V~i~~P~~~~~g~~~~l~~~~~~~~~~~~Y~v~~~~~~s~~~~~~~~~~~~~~~~~~~  183 (229)
T 1fyh_B          106 RDGKIGPP-KLDIRKE-EKQIMIDIFHPSVFVNGDEQEVDYDPETTCYIRVYNVYVRMNGSEIQYKILTQKEDDCDEIQC  183 (229)
T ss_dssp             HHSBCCCC-EEEEEEC-SSEEEEEEECCGGGC-----------CCSCSEEEEEEEEEETTEEEEEEEESSSCTTBCSSEE
T ss_pred             eeeEECCC-eEEEEEe-CCEEEEEEeCCCcccCCCcceeeecCcccccceEEEEEEEECCCCeeEEEEeecccCccccce
Confidence            22334556 4776654 4588888887742110            112238999998873321111111     0  234


Q ss_pred             EEEEccCCCCcEEEEEEEEeeC--CCCCCCCCCeEEEccc
Q psy8774         146 KAVFSNLEEGIEYSAEVQAITK--AGPGPWSPKLSLMTAR  183 (427)
Q Consensus       146 ~~~i~~L~p~t~Y~~~V~a~~~--~g~~~~s~~~~~~t~~  183 (427)
                      .+.|.+|.|++.|.|+|++...  .-.|.+|....+.+..
T Consensus       184 ~~~i~~L~p~t~YCv~v~~~~~~~~k~s~~S~~~Ci~t~~  223 (229)
T 1fyh_B          184 QLAIPVSSLNSQYCVSAEGVLHVWGVTTEKSKEVCITIFN  223 (229)
T ss_dssp             EEEEECCTTCCEEEEEEEEEETTTCCBCCCCCCEEEECCC
T ss_pred             eEEEeeCCCCCeEEEEEEEEeccCCccCCCCCCEeEecCC
Confidence            5889999999999999999742  2345678888887743

>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}

Probab=98.68  E-value=3.3e-07  Score=78.79  Aligned_cols=128  Identities=14%  Similarity=0.225  Sum_probs=82.7

Q ss_pred             EEcCCCCCceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCC-CC--cceeEEEEE
Q psy8774          51 LITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTH-RN--GQIVLYNVK  127 (427)
Q Consensus        51 ~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~-~~--~~i~~Y~v~  127 (427)
                      ....|..+..|.+.|.+  ..|........+.....+-+.||.++.+..  ...+.|+|++|.... .+  .....|+|+
T Consensus        65 ~~~~~~~~~~y~v~v~~--~~g~~~s~~~~f~~~~iVkp~PP~nltv~~--~~~l~lsW~~P~~~p~~~~~~~~L~Yevr  140 (219)
T 3tgx_A           65 DVFHFMADDIFSVQITD--QSGQYSQECGSFLLAESIKPAPPFDVTVTF--SGQYQISWRSDYEDPAFYMLKGKLQYELQ  140 (219)
T ss_dssp             CGGGSCTTCEEEEEEEC--TTSSCEEEEEEEEGGGCBCCCCCEEEEEEE--SSSEEEEEECGGGSGGGGGGTTSEEEEEE
T ss_pred             ECccccccceEEEEEEe--CCCCEEecCceEeeeeeEEeCCCCceEEEe--CCCEEEEEeCCcCCccccccccCEEEEEE
Confidence            33467778888876643  444332223344444455567898998873  468999999884210 01  134689999


Q ss_pred             EEEccCCCce----EEEee--eeeEEEEccCCCCcEEEEEEEEeeCCCC------CCCCCCeEEEcc
Q psy8774         128 FHKKIDANNV----IHRNT--TQTKAVFSNLEEGIEYSAEVQAITKAGP------GPWSPKLSLMTA  182 (427)
Q Consensus       128 ~~~~~~~~~~----~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~g~------~~~s~~~~~~t~  182 (427)
                      |+..+..-..    .....  ....+.+.+|.|++.|.|+|||....|.      |.+|.++.+.|.
T Consensus       141 yr~~~~~W~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~  207 (219)
T 3tgx_A          141 YRNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQ  207 (219)
T ss_dssp             EEETTSCTTSCCEEEEECSSCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECC
T ss_pred             EecCCCCceecccceeEecCCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECC
Confidence            9988432111    11222  2456667899999999999999987542      356888888874

>1y6k_R Interleukin-10 receptor alpha chain; helix bundle, receptor complex, immune system; 2.52A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1j7v_R* 1lqs_R 1y6m_R 1y6n_R

Probab=98.57  E-value=9.3e-06  Score=69.03  Aligned_cols=168  Identities=15%  Similarity=0.122  Sum_probs=105.4

Q ss_pred             EEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe--ecCcceEEEcC--CCCCc--eEEEEEEEEeccCcCcccce--E
Q psy8774           9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--NSKNMSFLITN--LERGV--EYEFRIAGQNHIGYGQETVR--Y   80 (427)
Q Consensus         9 sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~--L~p~t--~Y~~~V~a~~~~g~~~~~~~--~   80 (427)
                      .-.|+|+++.. .+....|.|+|..-+...|....  .... .|.|++  +....  .|.+||+|..+...+.....  .
T Consensus        19 ~~iL~W~p~~~-~~~~~~YtVqy~~~~~~~W~~~~~C~~it-~CDlT~~~~d~~~~~~y~~RVrA~~~~~~S~w~~s~~~   96 (214)
T 1y6k_R           19 HHILHWTPIPQ-QSESTCYEVALLRYGIESWNSISQCSQTL-SYDLTAVTLDLYHSNGYRARVRAVDGSRHSQWTVTNTR   96 (214)
T ss_dssp             EEEEEECCCTT-CCTTCEEEEEEEETTSCCCEEEEEEESSS-EEECGGGGTTGGGSSCEEEEEEEEETTEECCCEECSSC
T ss_pred             cEEEEECCCCC-CCCCeEEEEEEEEcCCCCCeeCCCCCccc-eEECCCcccccccCccEEEEEEEecCCcccCCEecCCc
Confidence            35689999754 34567899999987666687653  2233 888887  45544  89999999998777765432  3


Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCC-c----ce----eEEEEEEEEccCCCceEEEeeeeeEEEEcc
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRN-G----QI----VLYNVKFHKKIDANNVIHRNTTQTKAVFSN  151 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~-~----~i----~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~  151 (427)
                      +... ....+|| .+.+.. ....|.|.-.+|...... .    .+    ..|.+.++.................+.+..
T Consensus        97 F~p~-~t~igPP-~v~l~~-~~~~l~V~i~~P~~~~~~~~~~y~~~f~~~~~y~~~~~k~~~~~~~~~~~~~~~~l~~~~  173 (214)
T 1y6k_R           97 FSVD-EVTLTVG-SVNLEI-HNGFILGKIQLPRPKMAPAQDTYESIFSHFREYEIAIRKVPGQFTFTHKKVKHEQFSLLT  173 (214)
T ss_dssp             BCGG-GEEBCCS-EEEEEE-CSSEEEEEEECCCCSSSCTTCCHHHHSCSCEEEEEEEEEESSCSCCEEEEESSSEEEEEC
T ss_pred             eeec-ccEECCC-eEEEEE-eCCEEEEEEECCCcccccchhhhhheeccccEEEEEEEcccccCcccceeeeeeeeeccC
Confidence            4433 4455667 477665 445999999888521111 1    11    138888877633222222112233455556


Q ss_pred             CCCCcEEEEEEEEeeCCC--CCCCCCCeEEEc
Q psy8774         152 LEEGIEYSAEVQAITKAG--PGPWSPKLSLMT  181 (427)
Q Consensus       152 L~p~t~Y~~~V~a~~~~g--~~~~s~~~~~~t  181 (427)
                      +.+++.|.|+|++.-..-  .|.+|+...+.+
T Consensus       174 p~~~t~YCv~v~~~~~~~~~~s~~S~~~C~~~  205 (214)
T 1y6k_R          174 SGEVGEFCVQVKPSVASRSNKGMWSKEECISL  205 (214)
T ss_dssp             CSCCSEEEEEEEEEETTCCCCBCCCCCEEEEC
T ss_pred             CCCCCeEEEEEEEEeccCCCcCCCCCCEeEEc
Confidence            667999999999864311  245677777665

>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*

Probab=98.56  E-value=2e-07  Score=89.91  Aligned_cols=88  Identities=16%  Similarity=0.213  Sum_probs=71.7

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      ..|.++++...+.++++|+|.+|  +++.+..|+|.|...+......                              ...
T Consensus       371 ~~~~~l~~~~~~~~s~~l~W~~p--~~~~~~~y~v~y~~~~~~~~~~------------------------------~~~  418 (461)
T 3csg_A          371 SVPTNLEVVAATPTSLLISWDAS--YSSSVSYYRITYGETGGNSPVQ------------------------------EFT  418 (461)
T ss_dssp             CSSCCCEEEEECSSCEEEECCCT--TGGGCSEEEEEEEETTCCSCCE------------------------------EEE
T ss_pred             CCCcceEEeccCCCeEEEEecCC--CCCcceEEEEEEEECCCCccce------------------------------EEE
Confidence            56889999999999999999998  4678999999998873211001                              223


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEe
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK  307 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~  307 (427)
                      ..+..++++|.+|+|+|.|.|+|+|++.. .|.+|.++.+.
T Consensus       419 ~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~-~g~~s~~~~~~  458 (461)
T 3csg_A          419 VPGSKSTATISGLSPGVDYTITVYAYSYY-YYYYSSPISIN  458 (461)
T ss_dssp             EETTCCEEEECSCCTTCEEEEEEEEECTT-SCBCSCCEEEE
T ss_pred             ecCCCceEEecCCCCCCEEEEEEEEEecc-CCCCCCCEEEe
Confidence            44567899999999999999999999999 99999887764

>3s9d_B Interferon alpha/beta receptor 2; human, type I interferons, IFNA2, ifnar2, SUB-complex of the interferon signaling complex; 2.00A {Homo sapiens} PDB: 1n6u_A 1n6v_A 2hym_A 2ksx_B 2kz1_B 2lag_B 3se4_C* 3se3_C* 3s8w_A*

Probab=98.55  E-value=3.8e-06  Score=70.08  Aligned_cols=182  Identities=12%  Similarity=0.026  Sum_probs=99.7

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccC--CCCcEEEEEEEEe
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNL--EEGIEYSAEVQAI  165 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L--~p~t~Y~~~V~a~  165 (427)
                      |.++++.+.+ -.-.|.|+++.  .. .....|.|+|........|...    ..+.+.+.|+++  .+...|.+||+|.
T Consensus         5 ~~Nv~~~S~N-f~~iL~W~p~~--~~-~~~v~YtVqy~~~~~~~~W~~v~~C~nit~t~CDLt~~~~~~~~~Y~~RV~A~   80 (199)
T 3s9d_B            5 SCTFKISLRN-FRSILSWELKN--HS-IVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGF   80 (199)
T ss_dssp             -CEEEEEEET-TEEEEEEECSS--CC-SSCCEEEEEEEESSSCCCCEECGGGSSBSCSEEECTTTCCCSSSCEEEEEEEE
T ss_pred             ceEEEEEEEC-CceEEEECCCC--CC-CCCcEEEEEEEEecCCCcceECCcCCccCCCEEcCCCccccCcccEEEEEEEE
Confidence            5688877644 46789999984  22 2335899999875334445432    356889999886  6889999999998


Q ss_pred             eCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEE-EEEEEeccccccccccccccccccc
Q psy8774         166 TKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGY-QIFYTMTAVEDLDEWSQKSIPLTES  244 (427)
Q Consensus       166 ~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y-~I~~~~~~~~~~~~~~~~~~~~~~~  244 (427)
                      .+...+. +....|....+.-..|..+.+... ..++.|.-..|..-+.....| .+.|+..-.......   ..     
T Consensus        81 ~g~~~S~-~~s~~F~p~~~T~IgPP~v~l~~~-~~~i~V~i~~P~~~~~~~~~y~sl~~~~~~~~~~k~~---~~-----  150 (199)
T 3s9d_B           81 SGNTTLF-SCSHNFWLAIDMSFEPPEFEIVGF-TNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKKH---KP-----  150 (199)
T ss_dssp             C--CCEE-EEEEEECHHHHCEECCCEEEEEEC-SSCEEEEEECCC----CCCCCCEEEEEEEETTEEEEE---CC-----
T ss_pred             CCCCCCc-eEecceehHHhCccCCCEEEEEec-CCEEEEEEECCcccccccceeEEEEEEEEecccceEe---ee-----
Confidence            6533332 222333322222234446777654 457888888775321122222 344443311100000   00     


Q ss_pred             ccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC-CCCCccceE
Q psy8774         245 SNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG-LGRLSGKVT  305 (427)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G-~g~~s~~~~  305 (427)
                                       . ..........+.|.+|.|++.|.++|.+..... .+..|....
T Consensus       151 -----------------~-~~~~~~~~~~~vi~~L~P~T~YCv~V~~~~~~~~~s~~S~~~C  194 (199)
T 3s9d_B          151 -----------------E-IKGNMSGNFTYIIDKLIPNTNYCVSVYLEHSDEQAVIKSPLKC  194 (199)
T ss_dssp             -----------------C-----CCSEEEEEECSCCSSCEEEEEEEEEC---CCCCCCCCEE
T ss_pred             -----------------e-eeecccCcceEEEeccCCCCcEEEEEEEEeCCCCCCCCCCCee
Confidence                             0 000112334678999999999999999854322 344555433

>2hft_A Human tissue factor; coagulation factor; 1.69A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1jps_T 1ahw_C 1boy_A 1tfh_A 1wtg_T* 1wss_T* 1wqv_T* 1wun_T* 1wv7_T* 2zp0_T* 2zwl_T* 2zzu_T* 1z6j_T* 2aei_T* 2flb_T* 2b7d_T* 2f9b_T* 1o5d_T* 2flr_T* 1w0y_T* ...

Probab=98.54  E-value=3e-06  Score=72.20  Aligned_cols=168  Identities=16%  Similarity=0.202  Sum_probs=103.5

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEcc-C--CCCcEEEEEEEE
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSN-L--EEGIEYSAEVQA  164 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~-L--~p~t~Y~~~V~a  164 (427)
                      .+|.++++.+.+ -.-.|.|+++..      ...|.|+|...+  ..|.  +.....+.|.|++ +  .....|.+||+|
T Consensus         7 p~P~NV~~~S~N-f~~iL~W~p~~~------n~~YtVqy~~~~--~~W~~~C~~it~t~CDlT~~~~~d~~~~y~~RVrA   77 (218)
T 2hft_A            7 VAAYNLTWKSTN-FKTILEWEPKPV------NQVYTVQISTKS--GDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFS   77 (218)
T ss_dssp             CCCEEEEEEEET-TEEEEEEECCCS------SEEEEEEEEETT--SCCEEEEEEESCSEEECHHHHGGGTTSCEEEEEEE
T ss_pred             CCCceeEEEEEc-CeEEEEEcCCCC------CeEEEEEEEEcC--cchHhhCcCCCCCEEcCCcccccCCCceEEEEEEE
Confidence            368999988755 477899999852      368999999873  3343  3345578899987 3  678889999999


Q ss_pred             eeCCCCCC--------CCCCeEEEcc-cccCCCCCceEEEeeeCcEEEEEeeeCCCC---C----------CceeEEEEE
Q psy8774         165 ITKAGPGP--------WSPKLSLMTA-RDMVRAPLGVKALATSDQSVEVWWKPVPAG---R----------GKILGYQIF  222 (427)
Q Consensus       165 ~~~~g~~~--------~s~~~~~~t~-~~~p~~p~~l~~~~~~~~si~v~W~~p~~~---~----------g~i~~Y~I~  222 (427)
                      ..+.+.+.        ++....|... .....||. +.+....+++|.|.-.+|...   +          +....|.|.
T Consensus        78 ~~~~~~~~~S~~~~s~w~~s~~F~p~~~t~igPP~-v~l~~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~l~Y~v~  156 (218)
T 2hft_A           78 YPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPT-IQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLY  156 (218)
T ss_dssp             EECSSCCCC----CCCEEECCCBCHHHHSBCCCCC-EEEEEEETTEEEEEECCCEEEEEETTEEEEHHHHHGGGCEEEEE
T ss_pred             EeCCCCCccccccccCcccccceeehHhCEECCCE-EEEEECCCCEEEEEEECCCCccccCCcccchhHhcCCCeEEEEE
Confidence            97642122        2222223221 12334454 888776666999999888631   1          124679999


Q ss_pred             EEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEec
Q psy8774         223 YTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTV  294 (427)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~  294 (427)
                      |+...+..........                         .. .......+ +.+|.|++.|+|+|++.-.
T Consensus       157 ~w~~~s~~~~~~~~~~-------------------------k~-~~~~~~~~-~~~L~p~t~YCv~v~~~~~  201 (218)
T 2hft_A          157 YWKSSSQEKGEFRSGK-------------------------KT-AKTNTNEF-LIDVDKGENYCFSVQAVIP  201 (218)
T ss_dssp             EECCC---------CC-------------------------EE-EEESSSEE-EEECCTTCCCEEEEEEECT
T ss_pred             EEECCCCcccccccce-------------------------EE-EecCCceE-EecCCCCCCEeEEEEEEEe
Confidence            9987432110000000                         00 11112334 4569999999999999854

>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*

Probab=98.52  E-value=4.6e-07  Score=87.34  Aligned_cols=85  Identities=20%  Similarity=0.347  Sum_probs=69.8

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      .|.++++...+.++++|+|.+|    .++.+..|+|.|.+.+...  .........+++.|.+|.|+|.|.|+|+|....
T Consensus       372 ~~~~l~~~~~~~~s~~l~W~~p----~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~  447 (461)
T 3csg_A          372 VPTNLEVVAATPTSLLISWDAS----YSSSVSYYRITYGETGGNSPVQEFTVPGSKSTATISGLSPGVDYTITVYAYSYY  447 (461)
T ss_dssp             SSCCCEEEEECSSCEEEECCCT----TGGGCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECTT
T ss_pred             CCcceEEeccCCCeEEEEecCC----CCCcceEEEEEEEECCCCccceEEEecCCCceEEecCCCCCCEEEEEEEEEecc
Confidence            4779999999999999999988    3468999999998874332  233334558999999999999999999999988


Q ss_pred             CCCCCCCCeEEE
Q psy8774         169 GPGPWSPKLSLM  180 (427)
Q Consensus       169 g~~~~s~~~~~~  180 (427)
                       .|..|.++.+.
T Consensus       448 -~g~~s~~~~~~  458 (461)
T 3csg_A          448 -YYYYSSPISIN  458 (461)
T ss_dssp             -SCBCSCCEEEE
T ss_pred             -CCCCCCCEEEe
Confidence             88888887654

>1y6k_R Interleukin-10 receptor alpha chain; helix bundle, receptor complex, immune system; 2.52A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1j7v_R* 1lqs_R 1y6m_R 1y6n_R

Probab=98.51  E-value=1e-05  Score=68.81  Aligned_cols=180  Identities=13%  Similarity=0.117  Sum_probs=109.8

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEcc--CCCCc--EEEEEEEE
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSN--LEEGI--EYSAEVQA  164 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~--L~p~t--~Y~~~V~a  164 (427)
                      +|+++++.+.+ -.-.|.|+++..   .+....|.|+|..-+. ..|....  ...+.|.|++  +....  .|.+||+|
T Consensus         7 ~P~NV~~~S~N-f~~iL~W~p~~~---~~~~~~YtVqy~~~~~-~~W~~~~~C~~it~CDlT~~~~d~~~~~~y~~RVrA   81 (214)
T 1y6k_R            7 SPPSVWFEAEF-FHHILHWTPIPQ---QSESTCYEVALLRYGI-ESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVRA   81 (214)
T ss_dssp             CCSCEEEEEET-TEEEEEECCCTT---CCTTCEEEEEEEETTS-CCCEEEEEEESSSEEECGGGGTTGGGSSCEEEEEEE
T ss_pred             CCceeEEEEEc-CcEEEEECCCCC---CCCCeEEEEEEEEcCC-CCCeeCCCCCccceEECCCcccccccCccEEEEEEE
Confidence            68899988755 477899999742   3456689999998633 3343321  1212888887  34544  89999999


Q ss_pred             eeCCCCCCCCCC-eEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCC---c-----e---eEEEEEEEeccccccc
Q psy8774         165 ITKAGPGPWSPK-LSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRG---K-----I---LGYQIFYTMTAVEDLD  232 (427)
Q Consensus       165 ~~~~g~~~~s~~-~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g---~-----i---~~Y~I~~~~~~~~~~~  232 (427)
                      ..+...+.++.. ..|........|| .+.+.. .+.+|.|.-.+|.....   .     .   ..|.|.++.....  .
T Consensus        82 ~~~~~~S~w~~s~~~F~p~~t~igPP-~v~l~~-~~~~l~V~i~~P~~~~~~~~~~y~~~f~~~~~y~~~~~k~~~~--~  157 (214)
T 1y6k_R           82 VDGSRHSQWTVTNTRFSVDEVTLTVG-SVNLEI-HNGFILGKIQLPRPKMAPAQDTYESIFSHFREYEIAIRKVPGQ--F  157 (214)
T ss_dssp             EETTEECCCEECSSCBCGGGEEBCCS-EEEEEE-CSSEEEEEEECCCCSSSCTTCCHHHHSCSCEEEEEEEEEESSC--S
T ss_pred             ecCCcccCCEecCCceeecccEECCC-eEEEEE-eCCEEEEEEECCCcccccchhhhhheeccccEEEEEEEccccc--C
Confidence            988777766544 3444332233444 477765 45699999998874211   0     1   2377776654211  0


Q ss_pred             ccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC--CCCCccceEEeec
Q psy8774         233 EWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG--LGRLSGKVTVKVK  309 (427)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G--~g~~s~~~~~~t~  309 (427)
                      ..                             ..... ....+.+..+.+++.|+|+|++.-..-  .|.+|....+.+.
T Consensus       158 ~~-----------------------------~~~~~-~~~~l~~~~p~~~t~YCv~v~~~~~~~~~~s~~S~~~C~~~~  206 (214)
T 1y6k_R          158 TF-----------------------------THKKV-KHEQFSLLTSGEVGEFCVQVKPSVASRSNKGMWSKEECISLT  206 (214)
T ss_dssp             CC-----------------------------EEEEE-SSSEEEEECCSCCSEEEEEEEEEETTCCCCBCCCCCEEEECC
T ss_pred             cc-----------------------------cceee-eeeeeeccCCCCCCeEEEEEEEEeccCCCcCCCCCCEeEEcC
Confidence            00                             00000 112344555666999999999875321  2677887777663

>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.47  E-value=1.4e-06  Score=60.44  Aligned_cols=74  Identities=19%  Similarity=0.275  Sum_probs=62.6

Q ss_pred             ceEEEEEeeCCCCCCCcceEeEEEEEEecCc-cceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEe
Q psy8774           7 EVTIELVWSQPTQTYGEILGYRVKYGVREHT-LKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYT   82 (427)
Q Consensus         7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~   82 (427)
                      +++-.|.|+.+.  ..++..|.|.|+..... .|..+. +....+|+|++|.|+..|+..|.+.+..|.++.+...+.
T Consensus        20 pdsh~iqW~~~s--~s~I~eyiL~~R~k~~~g~Wke~~Ip~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~Ft   95 (98)
T 1oww_A           20 PNSHPIQWNAPQ--PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFT   95 (98)
T ss_dssp             TTCEEEEEECCS--SSCEEEEEEEEEETTCSSCCEEEEECSSCCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEE
T ss_pred             CCccceEEecCC--CCCceEEEEEEEEcCCCCceeEEEecCccceEEEecCCCCcEEEEEEEEeeccCcccceEEEEE
Confidence            677789999987  66899999999987654 487776 888999999999999999999999999998875533333

>3s9d_B Interferon alpha/beta receptor 2; human, type I interferons, IFNA2, ifnar2, SUB-complex of the interferon signaling complex; 2.00A {Homo sapiens} PDB: 1n6u_A 1n6v_A 2hym_A 2ksx_B 2kz1_B 2lag_B 3se4_C* 3se3_C* 3s8w_A*

Probab=98.44  E-value=9.2e-06  Score=67.78  Aligned_cols=152  Identities=10%  Similarity=0.049  Sum_probs=91.8

Q ss_pred             EEEEeeCCCCCCCcceEeEEEEEEec-CccceeEe---ecCcceEEEcCC--CCCceEEEEEEEEeccCcCcccceEEeC
Q psy8774          10 IELVWSQPTQTYGEILGYRVKYGVRE-HTLKENLV---NSKNMSFLITNL--ERGVEYEFRIAGQNHIGYGQETVRYYTT   83 (427)
Q Consensus        10 v~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~---~~~~~~~~~~~L--~p~t~Y~~~V~a~~~~g~~~~~~~~~~t   83 (427)
                      -.|+|+++.... ....|.|+|+.-+ ...|....   ....+.|.|+++  .+...|.+||+|..+...+......+..
T Consensus        17 ~iL~W~p~~~~~-~~v~YtVqy~~~~~~~~W~~v~~C~nit~t~CDLt~~~~~~~~~Y~~RV~A~~g~~~S~~~s~~F~p   95 (199)
T 3s9d_B           17 SILSWELKNHSI-VPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGNTTLFSCSHNFWL   95 (199)
T ss_dssp             EEEEEECSSCCS-SCCEEEEEEEESSSCCCCEECGGGSSBSCSEEECTTTCCCSSSCEEEEEEEEC--CCEEEEEEEECH
T ss_pred             eEEEECCCCCCC-CCcEEEEEEEEecCCCcceECCcCCccCCCEEcCCCccccCcccEEEEEEEECCCCCCceEecceeh
Confidence            468999986432 2368999998653 55686654   567789999886  6788999999998765555422223322


Q ss_pred             CCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEE-EEEEEEccCCCceEEEe------eeeeEEEEccCCCCc
Q psy8774          84 PEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLY-NVKFHKKIDANNVIHRN------TTQTKAVFSNLEEGI  156 (427)
Q Consensus        84 ~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y-~v~~~~~~~~~~~~~~~------~~~~~~~i~~L~p~t  156 (427)
                      ....-.+|| .+.+... .+.+.|.-..|...  +....-| .+.|+....+.......      .......|.+|.|+|
T Consensus        96 ~~~T~IgPP-~v~l~~~-~~~i~V~i~~P~~~--~~~~~~y~sl~~~~~~~~~~k~~~~~~~~~~~~~~~~vi~~L~P~T  171 (199)
T 3s9d_B           96 AIDMSFEPP-EFEIVGF-TNHINVMVKFPSIV--EEELQFDLSLVIEEQSEGIVKKHKPEIKGNMSGNFTYIIDKLIPNT  171 (199)
T ss_dssp             HHHCEECCC-EEEEEEC-SSCEEEEEECCC------CCCCCCEEEEEEEETTEEEEECCC----CCSEEEEEECSCCSSC
T ss_pred             HHhCccCCC-EEEEEec-CCEEEEEEECCccc--ccccceeEEEEEEEEecccceEeeeeeeecccCcceEEEeccCCCC
Confidence            222233445 6666543 45777777777422  1122222 45555443221111111      234578999999999


Q ss_pred             EEEEEEEEee
Q psy8774         157 EYSAEVQAIT  166 (427)
Q Consensus       157 ~Y~~~V~a~~  166 (427)
                      .|.++|.+..
T Consensus       172 ~YCv~V~~~~  181 (199)
T 3s9d_B          172 NYCVSVYLEH  181 (199)
T ss_dssp             EEEEEEEEEC
T ss_pred             cEEEEEEEEe
Confidence            9999999853

>1wft_A 1700129L13RIK protein; FN3 domain, similar to HOST cell factor 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.38  E-value=6.9e-06  Score=59.16  Aligned_cols=87  Identities=17%  Similarity=0.320  Sum_probs=64.8

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC-----ceEEE---eeeeeEEEEc---------cC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN-----NVIHR---NTTQTKAVFS---------NL  152 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~-----~~~~~---~~~~~~~~i~---------~L  152 (427)
                      ++|..+++.. +...+.|+|++|.  ..+|.|..|.|++.......     ....+   .+...+|++.         ++
T Consensus         9 gAPs~ikIsK-~~dgahLsWePP~--~~sG~I~EYSVYlAvrs~~~~~~~~qL~FvrVYcG~~~~C~V~~~~L~~ahid~   85 (123)
T 1wft_A            9 GAPSTVRISK-NVDGIHLSWEPPT--SPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDY   85 (123)
T ss_dssp             CCCEEEEEEE-CSSEEEEEEECCS--SCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBC
T ss_pred             CCCcceEEee-CCCceEEeecCCC--CCCcccEEEEEEEEecccccCCCcCeeeEEEEEecCCcceEecccchhhhhhcc
Confidence            6788888765 6789999999995  56789999999987653211     11111   2457888887         77


Q ss_pred             CCCcEEEEEEEEeeCCCCCCCCCCeEE
Q psy8774         153 EEGIEYSAEVQAITKAGPGPWSPKLSL  179 (427)
Q Consensus       153 ~p~t~Y~~~V~a~~~~g~~~~s~~~~~  179 (427)
                      .+-..|.|||.|.|..|.|+.+...-+
T Consensus        86 t~kpAiiFRIaArNeKGYGPaTqVrwl  112 (123)
T 1wft_A           86 TSRPAIVFRISAKNEKGYGPATQIRWL  112 (123)
T ss_dssp             SSSCEEEEEEEEBSSSSBCCCEEEEEE
T ss_pred             CCCceEEEEEEeecCCCCCCcccceeh
Confidence            777799999999999999976644433

>1wft_A 1700129L13RIK protein; FN3 domain, similar to HOST cell factor 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.38  E-value=3.9e-06  Score=60.44  Aligned_cols=95  Identities=18%  Similarity=0.280  Sum_probs=65.7

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccc-ccccccccccccccceeEEeeecccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLD-EWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      +-|.+|..+++.. +...+.|+|++|...+|.|..|.|++......... .+     .+.                    
T Consensus         6 gfPgAPs~ikIsK-~~dgahLsWePP~~~sG~I~EYSVYlAvrs~~~~~~~~-----qL~--------------------   59 (123)
T 1wft_A            6 SGPGAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPS-----QLV--------------------   59 (123)
T ss_dssp             SCCCCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSC-----CCE--------------------
T ss_pred             CCCCCCcceEEee-CCCceEEeecCCCCCCcccEEEEEEEEecccccCCCcC-----eee--------------------
Confidence            4468888888877 46789999999998889999999999876321111 11     111                    


Q ss_pred             ccccccCCCCceecc---------CCCCCCeEEEEEEEEeccCCCCCccce
Q psy8774         263 WSQKSVPLTESAELT---------SLEKFTEYAVAVAARTVNGLGRLSGKV  304 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~---------~L~p~t~Y~~~V~a~~~~G~g~~s~~~  304 (427)
                      +....-+...++++.         ++.+-..|.|||+|.|..|.|+.+..-
T Consensus        60 FvrVYcG~~~~C~V~~~~L~~ahid~t~kpAiiFRIaArNeKGYGPaTqVr  110 (123)
T 1wft_A           60 FMRIYCGLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIR  110 (123)
T ss_dssp             EEEEEEESCSEEEEEHHHHTTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEE
T ss_pred             EEEEEecCCcceEecccchhhhhhccCCCceEEEEEEeecCCCCCCcccce
Confidence            111223344444444         566667899999999999999987643

>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.21  E-value=1.2e-05  Score=55.79  Aligned_cols=76  Identities=17%  Similarity=0.345  Sum_probs=61.3

Q ss_pred             cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE
Q psy8774         101 TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS  178 (427)
Q Consensus       101 ~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~  178 (427)
                      .+++-.|+|+.++.    .++..|.+.|+.......|....  .-.++++|.+|+|+..|+..|.+.+..|.+..+ ...
T Consensus        19 ~pdsh~iqW~~~s~----s~I~eyiL~~R~k~~~g~Wke~~Ip~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs-~f~   93 (98)
T 1oww_A           19 QPNSHPIQWNAPQP----SHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVT-RFD   93 (98)
T ss_dssp             CTTCEEEEEECCSS----SCEEEEEEEEEETTCSSCCEEEEECSSCCEEEECSCCSSEEEEEEEEEEESSSCEEEE-EEE
T ss_pred             CCCccceEEecCCC----CCceEEEEEEEEcCCCCceeEEEecCccceEEEecCCCCcEEEEEEEEeeccCcccce-EEE
Confidence            36788899998852    58999999999886655565544  348999999999999999999999999887666 566


Q ss_pred             EEc
Q psy8774         179 LMT  181 (427)
Q Consensus       179 ~~t  181 (427)
                      |+|
T Consensus        94 FtT   96 (98)
T 1oww_A           94 FTT   96 (98)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            655

>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.18  E-value=6e-06  Score=55.31  Aligned_cols=73  Identities=10%  Similarity=0.061  Sum_probs=53.4

Q ss_pred             EEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCC
Q psy8774         204 VWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFT  283 (427)
Q Consensus       204 v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t  283 (427)
                      +.|++|+.  ..+..|.+.|++.+..  ..|.                            .....+..++|+|.||+||.
T Consensus         2 IqWnap~~--shi~~YIL~w~pk~~~--~~wK----------------------------ev~IPgh~nSYtIsGLkPGv   49 (89)
T 1q38_A            2 RGSNAPQP--SHISKYILRWRPKNSV--GRWK----------------------------EATIPGHLNSYTIKGLKPGV   49 (89)
T ss_dssp             CCCCCSSC--SSCSEEEEEEEETTTT--CCCE----------------------------EEEECSSSSCCCCCCCCTTC
T ss_pred             ccccCCCc--ccceeeEEEEEecCCC--CccE----------------------------EEEcCCccceEEEeccCCCc
Confidence            67997762  5789999999987432  2220                            23445668899999999999


Q ss_pred             eEEEEEEEEeccCCCCCccceEEeec
Q psy8774         284 EYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       284 ~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                      .|..++.++-..|.++. ..+.|+|.
T Consensus        50 tYegQLisV~r~g~~Ev-trfdfTT~   74 (89)
T 1q38_A           50 VYEGQLISIQQYGHQEV-TRFDFTTT   74 (89)
T ss_dssp             CEEEEEEEECTTSCCCE-EEEEECSS
T ss_pred             EEEEEEEeeeecccCCc-eEEEEEec
Confidence            99999999988766443 33666663

>2hft_A Human tissue factor; coagulation factor; 1.69A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1jps_T 1ahw_C 1boy_A 1tfh_A 1wtg_T* 1wss_T* 1wqv_T* 1wun_T* 1wv7_T* 2zp0_T* 2zwl_T* 2zzu_T* 1z6j_T* 2aei_T* 2flb_T* 2b7d_T* 2f9b_T* 1o5d_T* 2flr_T* 1w0y_T* ...

Probab=98.13  E-value=4.6e-05  Score=64.84  Aligned_cols=151  Identities=17%  Similarity=0.203  Sum_probs=94.0

Q ss_pred             EEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcC-C--CCCceEEEEEEEEecc---CcCc-----c
Q psy8774           9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITN-L--ERGVEYEFRIAGQNHI---GYGQ-----E   76 (427)
Q Consensus         9 sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~-L--~p~t~Y~~~V~a~~~~---g~~~-----~   76 (427)
                      .-.|.|+++..    ...|.|+|..-++ .|...- ....+.|.|++ +  .....|.+||+|..+.   ..+.     .
T Consensus        20 ~~iL~W~p~~~----n~~YtVqy~~~~~-~W~~~C~~it~t~CDlT~~~~~d~~~~y~~RVrA~~~~~~~~~S~~~~s~w   94 (218)
T 2hft_A           20 KTILEWEPKPV----NQVYTVQISTKSG-DWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLY   94 (218)
T ss_dssp             EEEEEEECCCS----SEEEEEEEEETTS-CCEEEEEEESCSEEECHHHHGGGTTSCEEEEEEEEECSSCCCC----CCCE
T ss_pred             eEEEEEcCCCC----CeEEEEEEEEcCc-chHhhCcCCCCCEEcCCcccccCCCceEEEEEEEEeCCCCCccccccccCc
Confidence            34589999863    4789999997654 576522 67778899987 3  6788899999999874   2221     1


Q ss_pred             c-ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCC-CCC----------cceeEEEEEEEEccCCCc------eE
Q psy8774          77 T-VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRT-HRN----------GQIVLYNVKFHKKIDANN------VI  138 (427)
Q Consensus        77 ~-~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~-~~~----------~~i~~Y~v~~~~~~~~~~------~~  138 (427)
                      + ...+........+|| .+.+.....+.|.|.-.+|... ..+          +....|.|.|+..+....      ..
T Consensus        95 ~~s~~F~p~~~t~igPP-~v~l~~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~l~Y~v~~w~~~s~~~~~~~~~~k  173 (218)
T 2hft_A           95 ENSPEFTPYLETNLGQP-TIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKSSSQEKGEFRSGKK  173 (218)
T ss_dssp             EECCCBCHHHHSBCCCC-CEEEEEEETTEEEEEECCCEEEEEETTEEEEHHHHHGGGCEEEEEEECCC---------CCE
T ss_pred             ccccceeehHhCEECCC-EEEEEECCCCEEEEEEECCCCccccCCcccchhHhcCCCeEEEEEEEECCCCcccccccceE
Confidence            1 111111112334556 4777766666899888887411 001          224689999998743311      12


Q ss_pred             EEeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774         139 HRNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus       139 ~~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      ........+ +.+|.|++.|.|+|++.-
T Consensus       174 ~~~~~~~~~-~~~L~p~t~YCv~v~~~~  200 (218)
T 2hft_A          174 TAKTNTNEF-LIDVDKGENYCFSVQAVI  200 (218)
T ss_dssp             EEEESSSEE-EEECCTTCCCEEEEEEEC
T ss_pred             EEecCCceE-EecCCCCCCEeEEEEEEE
Confidence            222223444 456999999999999974

>3bes_R Interferon-gamma binding protein C4R; orthopoxvirus, protein complex antiviral defense, cytokine, glycoprotein, receptor, immune; HET: NAG BMA; 2.20A {Ectromelia virus}

Probab=97.59  E-value=0.0068  Score=51.87  Aligned_cols=169  Identities=12%  Similarity=0.057  Sum_probs=100.2

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEccC--CCCcEEEEEEEEeeC
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSNL--EEGIEYSAEVQAITK  167 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L--~p~t~Y~~~V~a~~~  167 (427)
                      |.++++.+.+- .-.|.|++.         ..|.|+|..-+. ..|.  +.....+.|.|++.  .++..|.+||+|   
T Consensus         2 ~~NV~~~S~NF-~~IL~W~pn---------~tYtVQyk~yg~-~~W~~~C~ni~~t~CDlS~~~~d~~~~Y~aRV~A---   67 (250)
T 3bes_R            2 ITSYKFESVNF-DSKIEWTGN---------GLYNISLRNYGI-KTWQTMYTNVPEGTYDISGFPNNDFVSFWVKFEQ---   67 (250)
T ss_dssp             EEEEEEEEETT-EEEEEEEES---------SCEEEEEEETTC-CSCEEEEEEECSEEEECTTSSCSSSSCEEEEEEE---
T ss_pred             CEEEEEEEECC-ccEEEeCCC---------CEEEEEEEECCc-ChhHhhCcCCCCCEEECCCccccCCceEEEEEEE---
Confidence            67888777554 667999972         379999987732 2343  33455789999884  366789999999   


Q ss_pred             CCCCCCCCCe-EE-EcccccCCCCCceEEEeeeCcEEEEEeeeCCCC-CC-------c------eeEEEEEEEecccccc
Q psy8774         168 AGPGPWSPKL-SL-MTARDMVRAPLGVKALATSDQSVEVWWKPVPAG-RG-------K------ILGYQIFYTMTAVEDL  231 (427)
Q Consensus       168 ~g~~~~s~~~-~~-~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~-~g-------~------i~~Y~I~~~~~~~~~~  231 (427)
                       +   .+... .+ ......--.|..+++... +.+|.|.-.+|... +|       .      ...|+|+++.....+.
T Consensus        68 -~---es~~F~~~~~p~~~T~IGPP~V~l~~~-~~sI~V~I~~P~~~~~g~~~siy~~d~~~~~~l~Y~v~~~~~~s~e~  142 (250)
T 3bes_R           68 -G---DYKVDKYCTGLCIEVKIGPPTVTLTEY-DDHINLYIEHPYATRGSKKIPIYKRNDMCDIYLLYTANFTFGDSEEP  142 (250)
T ss_dssp             -T---TEEEEEEECCHHHHCBCCCCEEEEEEE-TTEEEEEEECCEEEETTEEEECSSCGGGTTCCCEEEEEEEETTCSSC
T ss_pred             -e---ccceeecCCCcccceEECCCeEEEEEe-CCEEEEEEECCCcccCCCceeeeccccccccceEEEEEEEECCCCcc
Confidence             1   12222 12 221222234446787764 55999988887632 22       1      2689998876532111


Q ss_pred             cccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEec---cCCCCCccceEEee
Q psy8774         232 DEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTV---NGLGRLSGKVTVKV  308 (427)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~---~G~g~~s~~~~~~t  308 (427)
                      ..+..+                            ....+.+.. .-.|.|++.|+|+|+|.-.   .-.|.+|..+...+
T Consensus       143 ~~~~v~----------------------------~~~~~~~~~-~~~l~p~t~YCV~Vq~~i~~~~~k~s~~S~~~Ci~~  193 (250)
T 3bes_R          143 VIYDID----------------------------DYDCTSTGC-SIDFATTEKVCVMAQGATEGLLDKITPWSSEVCLTP  193 (250)
T ss_dssp             EEEECC----------------------------GGGBCSSEE-EEEECCSSCEEEEEEEECCSSSCCBCCCCCCEEECC
T ss_pred             eEEEee----------------------------ecccCccee-EEEeCCCCcEEEEEEEeCcccccccCCCCcCEeEcC
Confidence            111000                            001111112 1235589999999999865   34777888766654

>2csp_A RIM-BP2, RIM binding protein 2; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.22  E-value=0.0011  Score=48.72  Aligned_cols=102  Identities=18%  Similarity=0.285  Sum_probs=66.6

Q ss_pred             CcccceEEeCCCCCCCCCCeeeEEEe-ecCCEEEEEeeCCCCCC----CCcceeEEEEEEEEccCCCceEEEe---eeee
Q psy8774          74 GQETVRYYTTPEGPPTGPPANISHHF-QTPDVVCITWDPPLRTH----RNGQIVLYNVKFHKKIDANNVIHRN---TTQT  145 (427)
Q Consensus        74 ~~~~~~~~~t~~~~p~~~p~~~~~~~-~~~~~v~v~W~~p~~~~----~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~  145 (427)
                      +....+.|.|...-|+.+|.++++.. ..+..+.|+|.++...-    ....+.||.|+-.    +.......   .+..
T Consensus         3 ~~~a~veF~Tl~aGpPdpP~dVqVe~Gp~pgtLlVsW~Pvt~~~~g~Snga~VtGY~VYad----GqkV~eV~~PTad~~   78 (130)
T 2csp_A            3 SGSSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAK----GQRVAEVIFPTADST   78 (130)
T ss_dssp             TSCCCSCCCCCCCCCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESS----SSEEEEECCTTCSEE
T ss_pred             CcceEEEEecCCCCCCCCCceeEEEeCCCCcEEEEEeECCcccCCCCCCCcceEEEEEEeC----CcEEEEecCCCCCcE
Confidence            33456778888888889999999885 46789999999986321    2348899999721    22222222   2233


Q ss_pred             EEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEE
Q psy8774         146 KAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSL  179 (427)
Q Consensus       146 ~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~  179 (427)
                      -+.+..|.-...+.+.||.....|.+.-|....+
T Consensus        79 lv~l~~L~~l~~~~VtVRT~S~~GeS~DS~~a~I  112 (130)
T 2csp_A           79 AVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAV  112 (130)
T ss_dssp             EEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCC
T ss_pred             EEEHHHhcCCCCcEEEEEeccCCccccCCccccC
Confidence            3444444433457899999988888755544433

>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A

Probab=97.21  E-value=0.0023  Score=56.01  Aligned_cols=87  Identities=15%  Similarity=0.038  Sum_probs=61.7

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      .|..|+.|.+.. .++.+.|+|+.+.   ..+..|+|+.-..........                             .
T Consensus        17 ~~~~~~~L~at~-~~~~v~LsWs~s~---~~v~~~~VYRdT~s~~sgr~r-----------------------------i   63 (344)
T 3b4n_A           17 SFAAQTTLMLSQ-KSDVNYLGWSTDE---SKVARQEVYRGTTSNPDLRER-----------------------------I   63 (344)
T ss_dssp             ---CCEEEEEEE-ETTEEEEEEEECC---SSEEEEEEEEESSSCGGGCEE-----------------------------E
T ss_pred             CCCCCceeeeec-cCCeEEEEeecCC---CCeeeEEEEccCCCCCCcceE-----------------------------E
Confidence            457789999988 8899999999774   589999995544311111111                             2


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccce
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV  304 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~  304 (427)
                      .......++|+-.++..|+.|.++|.+.+..|.+..|...
T Consensus        64 a~~~~st~tytDt~~~~GttYyYwVk~~~~ngs~~~Sn~~  103 (344)
T 3b4n_A           64 AVLDAETRTFKDADTNSGLNYWYWVDVVSENQAQVVSNAV  103 (344)
T ss_dssp             EEECSSCCEEEECCCCTTCCCEEEEEEEETTCCEEECCCE
T ss_pred             EeecccccEEEecCcCCCcEEEEEEEEecCCCcccCCCcc
Confidence            2334667899999999999999999999988766555433

>2csp_A RIM-BP2, RIM binding protein 2; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.21  E-value=0.00015  Score=53.24  Aligned_cols=98  Identities=22%  Similarity=0.333  Sum_probs=63.1

Q ss_pred             CCCeEEEc-ccccCCCCCceEEEee-eCcEEEEEeeeCCCC-----CC-ceeEEEEEEEecccccccccccccccccccc
Q psy8774         174 SPKLSLMT-ARDMVRAPLGVKALAT-SDQSVEVWWKPVPAG-----RG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESS  245 (427)
Q Consensus       174 s~~~~~~t-~~~~p~~p~~l~~~~~-~~~si~v~W~~p~~~-----~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~  245 (427)
                      +..+.|+| ..++|.+|.++++..- ....+.|+|.++...     || .+.||.|+....   ...+            
T Consensus         5 ~a~veF~Tl~aGpPdpP~dVqVe~Gp~pgtLlVsW~Pvt~~~~g~Snga~VtGY~VYadGq---kV~e------------   69 (130)
T 2csp_A            5 SSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQ---RVAE------------   69 (130)
T ss_dssp             CCCSCCCCCCCCCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSS---EEEE------------
T ss_pred             ceEEEEecCCCCCCCCCceeEEEeCCCCcEEEEEeECCcccCCCCCCCcceEEEEEEeCCc---EEEE------------
Confidence            45677877 6689999999999774 467999999998731     34 899999965332   1111            


Q ss_pred             cceeEEeeeccccccccccccccCCCCc--eeccCCCCCCeEEEEEEEEeccCCCCCccceEE
Q psy8774         246 NIARIFYTMTAVEDLDEWSQKSVPLTES--AELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV  306 (427)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~  306 (427)
                                          ...+...+  +.+..|+-...+.+.||.....|++.-|.+..+
T Consensus        70 --------------------V~~PTad~~lv~l~~L~~l~~~~VtVRT~S~~GeS~DS~~a~I  112 (130)
T 2csp_A           70 --------------------VIFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAV  112 (130)
T ss_dssp             --------------------ECCTTCSEEEEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCC
T ss_pred             --------------------ecCCCCCcEEEEHHHhcCCCCcEEEEEeccCCccccCCccccC
Confidence                                11111112  222223333357899999999998777765443

>3bes_R Interferon-gamma binding protein C4R; orthopoxvirus, protein complex antiviral defense, cytokine, glycoprotein, receptor, immune; HET: NAG BMA; 2.20A {Ectromelia virus}

Probab=97.13  E-value=0.025  Score=48.43  Aligned_cols=156  Identities=17%  Similarity=0.239  Sum_probs=93.3

Q ss_pred             EEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcCC--CCCceEEEEEEEEeccCcCcccceEE-eCCC
Q psy8774          10 IELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNL--ERGVEYEFRIAGQNHIGYGQETVRYY-TTPE   85 (427)
Q Consensus        10 v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L--~p~t~Y~~~V~a~~~~g~~~~~~~~~-~t~~   85 (427)
                      -.|.|++.       ..|.|+|..-+...|...- ....+.|.|++.  .++..|.+||+|    +.+..- ... ....
T Consensus        14 ~IL~W~pn-------~tYtVQyk~yg~~~W~~~C~ni~~t~CDlS~~~~d~~~~Y~aRV~A----~es~~F-~~~~~p~~   81 (250)
T 3bes_R           14 SKIEWTGN-------GLYNISLRNYGIKTWQTMYTNVPEGTYDISGFPNNDFVSFWVKFEQ----GDYKVD-KYCTGLCI   81 (250)
T ss_dssp             EEEEEEES-------SCEEEEEEETTCCSCEEEEEEECSEEEECTTSSCSSSSCEEEEEEE----TTEEEE-EEECCHHH
T ss_pred             cEEEeCCC-------CEEEEEEEECCcChhHhhCcCCCCCEEECCCccccCCceEEEEEEE----ecccee-ecCCCccc
Confidence            35899991       3699999877756676543 566788999884  456789999999    222111 011 1111


Q ss_pred             CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCc-------c------eeEEEEEEEEccCCCceE-EEe---eeeeEEE
Q psy8774          86 GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG-------Q------IVLYNVKFHKKIDANNVI-HRN---TTQTKAV  148 (427)
Q Consensus        86 ~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~-------~------i~~Y~v~~~~~~~~~~~~-~~~---~~~~~~~  148 (427)
                      ..--+|| .+.+...+ .+|.|.-.+|... .+|       .      ...|.|.++......... ...   .+.+.+.
T Consensus        82 ~T~IGPP-~V~l~~~~-~sI~V~I~~P~~~-~~g~~~siy~~d~~~~~~l~Y~v~~~~~~s~e~~~~~v~~~~~~~~~~~  158 (250)
T 3bes_R           82 EVKIGPP-TVTLTEYD-DHINLYIEHPYAT-RGSKKIPIYKRNDMCDIYLLYTANFTFGDSEEPVIYDIDDYDCTSTGCS  158 (250)
T ss_dssp             HCBCCCC-EEEEEEET-TEEEEEEECCEEE-ETTEEEECSSCGGGTTCCCEEEEEEEETTCSSCEEEECCGGGBCSSEEE
T ss_pred             ceEECCC-eEEEEEeC-CEEEEEEECCCcc-cCCCceeeeccccccccceEEEEEEEECCCCcceEEEeeecccCcceeE
Confidence            2223445 67777544 4888888777521 112       1      268999987763211111 111   1222232


Q ss_pred             EccCCCCcEEEEEEEEeeC---CCCCCCCCCeEEEc
Q psy8774         149 FSNLEEGIEYSAEVQAITK---AGPGPWSPKLSLMT  181 (427)
Q Consensus       149 i~~L~p~t~Y~~~V~a~~~---~g~~~~s~~~~~~t  181 (427)
                       -.|.|++.|.|+|+|.-.   .-.|.+|+.....+
T Consensus       159 -~~l~p~t~YCV~Vq~~i~~~~~k~s~~S~~~Ci~~  193 (250)
T 3bes_R          159 -IDFATTEKVCVMAQGATEGLLDKITPWSSEVCLTP  193 (250)
T ss_dssp             -EEECCSSCEEEEEEEECCSSSCCBCCCCCCEEECC
T ss_pred             -EEeCCCCcEEEEEEEeCcccccccCCCCcCEeEcC
Confidence             345599999999999854   33466787777654

>3cxe_C Granulocyte-macrophage colony-stimulating factor subunit alpha; GM-CSF, receptor complex, dodecamer, disease mutation, glyco membrane; HET: NAG BMA; 3.30A {Homo sapiens}

Probab=96.90  E-value=0.00084  Score=50.30  Aligned_cols=97  Identities=16%  Similarity=0.073  Sum_probs=59.1

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCC---CCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPA---GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVED  259 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~---~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (427)
                      .+.+.||.++++... .+.+.|+|+.|..   ....-..|+|.+...........                         
T Consensus        15 IErl~PP~nvtv~~~-~s~~~IqW~~P~s~~~~~~~cF~Yev~I~~~~~~~~~~~-------------------------   68 (120)
T 3cxe_C           15 XXXFNPPSNVTVRCN-TTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTEN-------------------------   68 (120)
T ss_dssp             CCCCCCCBCCCEEEC-SSBEEECCBCCCSSCSSCCEEEEEECCTTSCCCSSCCSC-------------------------
T ss_pred             ccCCCCCceEEEEEc-CCeEEEEECCCCcccccccccEEEEEEEcCCCCCccceE-------------------------
Confidence            345689999998884 5559999999932   11223345554433211000000                         


Q ss_pred             cccccccccCCCCceeccCCCCCCeEEEEEEEEecc--CCCCCccceEEe
Q psy8774         260 LDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN--GLGRLSGKVTVK  307 (427)
Q Consensus       260 ~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~--G~g~~s~~~~~~  307 (427)
                        .|........+.+.|..+.|...|.|+|||....  ..|+||.++.+.
T Consensus        69 --q~~~~~~~~~~~~~~~~~~~~~~ytVrVRa~~~~~~~WS~WSqp~~ig  116 (120)
T 3cxe_C           69 --LLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFG  116 (120)
T ss_dssp             --EEECCCSSSCCCCCCBCCSTTCBCCCEEEEEESSSCCCBCCCCCCCBC
T ss_pred             --EEEEeeccccceeEeeecCCCccEEEEEEeCCCCCCccCCCCCceEcc
Confidence              0011111124788899999999999999998654  377888877654

>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A

Probab=96.79  E-value=0.13  Score=42.34  Aligned_cols=156  Identities=11%  Similarity=0.049  Sum_probs=91.5

Q ss_pred             eEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCccc-ceEEeCCCC
Q psy8774           8 VTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET-VRYYTTPEG   86 (427)
Q Consensus         8 ~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~-~~~~~t~~~   86 (427)
                      ..+.|.|....  ++.+..|.+..   ++... -.......++....+..| .|.|+++|....|....+ ...+.... 
T Consensus        17 ~~vtv~~~As~--d~~V~~Ve~~~---dg~~v-~~~t~~~ys~~~~~~~~G-~htlta~A~D~aGn~s~s~~v~vtV~~-   88 (190)
T 3pdd_A           17 KDINISATVKS--KTPVSKVEFYN---GDTLI-SSDTTAPYTAKITGAAVG-AYNLKAVAVLSDGRRIESPVTPVLVKV-   88 (190)
T ss_dssp             SCEEEEEEECC--SSCEEEEEEEE---TTEEE-EEECSSSEEEEECSCCSE-EEEEEEEEEETTSCEEECCCEEEEEEC-
T ss_pred             CeEEEEEEEeC--CCCEEEEEEEE---CCEEE-ccccCCceEEEeccCCCc-cEEEEEEEEECCCCEeeecceeEEecc-
Confidence            37999999883  45677777653   22211 111334456777766555 799999999988865432 23333221 


Q ss_pred             CCCCCCeeeEEEee-------cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEE
Q psy8774          87 PPTGPPANISHHFQ-------TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYS  159 (427)
Q Consensus        87 ~p~~~p~~~~~~~~-------~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~  159 (427)
                        ..+| .+.+...       ....+.|+|...   +..|.+.++.++.  .  +...........++....  +...|.
T Consensus        89 --~~~P-tv~itsP~~g~~~~~~~~vtl~~~As---D~~g~V~~Ve~~~--d--g~~v~t~t~~~y~~~~~~--~~G~~t  156 (190)
T 3pdd_A           89 --IVKP-TVKLTAPKSNVVAYGNEFLKITATAS---DSDGKISRVDFLV--D--GEVIGSDREAPYEYEWKA--VEGNHE  156 (190)
T ss_dssp             --CCCC-EEEEEECCTTCCCBTTSEEEEEEEEE---CSSSCEEEEEEEE--T--TEEEEEECSSSEEEEEEC--CSEEEE
T ss_pred             --CCCC-ceeecCCCCCcEEecCCeEEEEEEEE---CCCCcEEEEEEEE--C--CEEEecccCCCEEEEEec--CCeeEE
Confidence              1233 2233321       245789999875   3334576666653  2  211111112233344444  778999


Q ss_pred             EEEEEeeCCCCCCCCCCeEEEccc
Q psy8774         160 AEVQAITKAGPGPWSPKLSLMTAR  183 (427)
Q Consensus       160 ~~V~a~~~~g~~~~s~~~~~~t~~  183 (427)
                      |+++|.+..|....|..+.+....
T Consensus       157 l~a~A~D~aGn~s~s~~vtvtv~~  180 (190)
T 3pdd_A          157 ISVIAYDDDDAASTPDSVKIFVKQ  180 (190)
T ss_dssp             EEEEEEETTCCBCCCEEEEEEEBC
T ss_pred             EEEEEEECCCCEEecceEEEEECC
Confidence            999999999987677777777643

>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A

Probab=96.62  E-value=0.13  Score=42.36  Aligned_cols=157  Identities=13%  Similarity=0.060  Sum_probs=90.9

Q ss_pred             CEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         103 DVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       103 ~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      ..+.|.|....    ++.+.+|.++.  .  +...........++....+ +...|.|+++|.+..|....+..+.+...
T Consensus        17 ~~vtv~~~As~----d~~V~~Ve~~~--d--g~~v~~~t~~~ys~~~~~~-~~G~htlta~A~D~aGn~s~s~~v~vtV~   87 (190)
T 3pdd_A           17 KDINISATVKS----KTPVSKVEFYN--G--DTLISSDTTAPYTAKITGA-AVGAYNLKAVAVLSDGRRIESPVTPVLVK   87 (190)
T ss_dssp             SCEEEEEEECC----SSCEEEEEEEE--T--TEEEEEECSSSEEEEECSC-CSEEEEEEEEEEETTSCEEECCCEEEEEE
T ss_pred             CeEEEEEEEeC----CCCEEEEEEEE--C--CEEEccccCCceEEEeccC-CCccEEEEEEEEECCCCEeeecceeEEec
Confidence            37899998762    24676666652  2  2211111222345666655 45589999999999887545555555443


Q ss_pred             cccCCCCCceEEEee-------eCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeec
Q psy8774         183 RDMVRAPLGVKALAT-------SDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMT  255 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~-------~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (427)
                      .  ..+|. +.+...       ....+.|+|.... ..|.+..++++....   ...                       
T Consensus        88 ~--~~~Pt-v~itsP~~g~~~~~~~~vtl~~~AsD-~~g~V~~Ve~~~dg~---~v~-----------------------  137 (190)
T 3pdd_A           88 V--IVKPT-VKLTAPKSNVVAYGNEFLKITATASD-SDGKISRVDFLVDGE---VIG-----------------------  137 (190)
T ss_dssp             C--CCCCE-EEEEECCTTCCCBTTSEEEEEEEEEC-SSSCEEEEEEEETTE---EEE-----------------------
T ss_pred             c--CCCCc-eeecCCCCCcEEecCCeEEEEEEEEC-CCCcEEEEEEEECCE---EEe-----------------------
Confidence            1  12222 222221       2447899998865 445688887765211   000                       


Q ss_pred             cccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         256 AVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                                .......++....  +...|.|+++|.+..|....|..+.+...+
T Consensus       138 ----------t~t~~~y~~~~~~--~~G~~tl~a~A~D~aGn~s~s~~vtvtv~~  180 (190)
T 3pdd_A          138 ----------SDREAPYEYEWKA--VEGNHEISVIAYDDDDAASTPDSVKIFVKQ  180 (190)
T ss_dssp             ----------EECSSSEEEEEEC--CSEEEEEEEEEEETTCCBCCCEEEEEEEBC
T ss_pred             ----------cccCCCEEEEEec--CCeeEEEEEEEEECCCCEEecceEEEEECC
Confidence                      0011112333333  566899999999999977778778877643

>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A

Probab=96.34  E-value=0.014  Score=51.21  Aligned_cols=75  Identities=12%  Similarity=0.099  Sum_probs=56.2

Q ss_pred             cceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe---ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEe
Q psy8774           6 PEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV---NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYT   82 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~   82 (427)
                      ++..+.|+|.++   +..+..|+|+........+....   ....++|+-+++..|+.|.+.|.+.+..|.+..+.....
T Consensus        29 ~~~~v~LsWs~s---~~~v~~~~VYRdT~s~~sgr~ria~~~~st~tytDt~~~~GttYyYwVk~~~~ngs~~~Sn~~sa  105 (344)
T 3b4n_A           29 KSDVNYLGWSTD---ESKVARQEVYRGTTSNPDLRERIAVLDAETRTFKDADTNSGLNYWYWVDVVSENQAQVVSNAVTT  105 (344)
T ss_dssp             ETTEEEEEEEEC---CSSEEEEEEEEESSSCGGGCEEEEEECSSCCEEEECCCCTTCCCEEEEEEEETTCCEEECCCEES
T ss_pred             cCCeEEEEeecC---CCCeeeEEEEccCCCCCCcceEEEeecccccEEEecCcCCCcEEEEEEEEecCCCcccCCCcccc
Confidence            678899999986   55789999965544444343222   577889999999999999999999998887765544444


Q ss_pred             C
Q psy8774          83 T   83 (427)
Q Consensus        83 t   83 (427)
                      +
T Consensus       106 ~  106 (344)
T 3b4n_A          106 A  106 (344)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*

Probab=96.15  E-value=0.0088  Score=59.03  Aligned_cols=115  Identities=23%  Similarity=0.345  Sum_probs=62.7

Q ss_pred             cCCCCCceEEE--eeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         185 MVRAPLGVKAL--ATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       185 ~p~~p~~l~~~--~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      .|..|.+|++.  ..+++++.|.|+.|. ..+.+..|.|+.....-.....-.. ...+.. .+. ..||..    +...
T Consensus        34 ~~~~p~~~~~~t~~~~~~si~l~~~~p~-~~~~~~~y~vy~ng~~v~~~~~~~~-~~~~~~-~~~-~~~~~~----~~~~  105 (608)
T 2uvf_A           34 SLDAPQQLQVPTLAYDESSIVLVWKAPE-DTRKIVDYQIFSAGKLLGKASDNND-NFSPAK-PYI-DHFYVN----DKDN  105 (608)
T ss_dssp             --CCCEEEECCTTCBCSSCEEEEEECCS-CCTTEEEEEEEETTEEEEEHHHHHH-HHCSSH-HHH-HHHHHT----CGGG
T ss_pred             CCCCCCceEeeecccCCcEEEEEEeCCc-cccccccEEEEECCEEeEeeccccc-cccccc-ccc-cccccc----cccc
Confidence            45678888874  457889999999997 4568899999763221000000000 000000 000 000000    0000


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCC-CCCccceEEeec
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL-GRLSGKVTVKVK  309 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~-g~~s~~~~~~t~  309 (427)
                      +....  ..+++.+.+|.|++.|.|+|.+.+..|. +..+..+..+|.
T Consensus       106 ~~~~~--~~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~  151 (608)
T 2uvf_A          106 FQHKI--VMQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTS  151 (608)
T ss_dssp             CSCCC--CCCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECC
T ss_pred             cccee--eeeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccc
Confidence            11111  3467889999999999999999987773 344555665553

>4go6_A HCF N-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=95.46  E-value=0.05  Score=31.85  Aligned_cols=39  Identities=21%  Similarity=0.301  Sum_probs=33.2

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEec
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMT  226 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~  226 (427)
                      ..|.+|..+++..-+.+++.|+|.+.+    ...+|.++.+..
T Consensus         5 ~kP~~PsrVQLvRAst~sLEv~W~~vp----tA~~YiLQiqky   43 (45)
T 4go6_A            5 EKPPPPARVQLVRANTNSLEVSWGAVA----TADSYLLQLQKY   43 (45)
T ss_dssp             SCCCCCEEEEEEEECSSCEEEEEECCT----TCSEEEEEEEEC
T ss_pred             ccCCCcceEEEEEeccceEEEEcCCCc----chheeEEEEEee
Confidence            457889999999999999999999987    568888887754

>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*

Probab=94.82  E-value=0.095  Score=51.69  Aligned_cols=85  Identities=15%  Similarity=0.188  Sum_probs=57.8

Q ss_pred             CCCeeeEEE--eecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--------------------------
Q psy8774          90 GPPANISHH--FQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--------------------------  141 (427)
Q Consensus        90 ~~p~~~~~~--~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--------------------------  141 (427)
                      .+|.+|.+.  ..+.+++.|.|+.|.   ..+.+..|.|+...    .......                          
T Consensus        36 ~~p~~~~~~t~~~~~~si~l~~~~p~---~~~~~~~y~vy~ng----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (608)
T 2uvf_A           36 DAPQQLQVPTLAYDESSIVLVWKAPE---DTRKIVDYQIFSAG----KLLGKASDNNDNFSPAKPYIDHFYVNDKDNFQH  108 (608)
T ss_dssp             CCCEEEECCTTCBCSSCEEEEEECCS---CCTTEEEEEEEETT----EEEEEHHHHHHHHCSSHHHHHHHHHTCGGGCSC
T ss_pred             CCCCceEeeecccCCcEEEEEEeCCc---cccccccEEEEECC----EEeEeeccccccccccccccccccccccccccc
Confidence            468888874  567889999999994   24678889997521    1111110                          


Q ss_pred             -eeeeEEEEccCCCCcEEEEEEEEeeCCCC-CCCCCCeEEEc
Q psy8774         142 -TTQTKAVFSNLEEGIEYSAEVQAITKAGP-GPWSPKLSLMT  181 (427)
Q Consensus       142 -~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~-~~~s~~~~~~t  181 (427)
                       ....++.+.+|.|++.|.|.|.+.+..|. +..++.+...+
T Consensus       109 ~~~~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T  150 (608)
T 2uvf_A          109 KIVMQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKT  150 (608)
T ss_dssp             CCCCCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEEC
T ss_pred             eeeeeeEEecCCCCCCEEEEEEEEecCCCcccccchhccccc
Confidence             12357899999999999999999877664 23455555554

>3cxe_C Granulocyte-macrophage colony-stimulating factor subunit alpha; GM-CSF, receptor complex, dodecamer, disease mutation, glyco membrane; HET: NAG BMA; 3.30A {Homo sapiens}

Probab=94.36  E-value=0.022  Score=42.65  Aligned_cols=82  Identities=10%  Similarity=0.116  Sum_probs=49.7

Q ss_pred             CCCCcceEEeecCCCeEEEEecCCC----cCCC-ceEEEEEeheeecc-----ee-ee--eeEEEEeecccccccceEEE
Q psy8774         311 EDVPLSLRAHDVSTHSMTLSWSPPI----KLNP-VKYKEVSEKIQERR-----LQ-KY--GQYRYFETRDESYIGKRVER  377 (427)
Q Consensus       311 ~~~P~~l~~~~~~~~~v~l~W~~P~----~~~g-~~Y~i~~~~~~~~~-----l~-~~--t~y~~~~~~~~~~~~~~~~~  377 (427)
                      ..||.++++.. .++...++|+.|.    .++. ..|++.+.......     .. ..  .. ..+.+....+.+.|.++
T Consensus        18 l~PP~nvtv~~-~~s~~~IqW~~P~s~~~~~~~cF~Yev~I~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~~ytVr   95 (120)
T 3cxe_C           18 FNPPSNVTVRC-NTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLE-NRYNFPSSEPRAKHSVK   95 (120)
T ss_dssp             CCCCBCCCEEE-CSSBEEECCBCCCSSCSSCCEEEEEECCTTSCCCSSCCSCEEECCCSSSC-CCCCCBCCSTTCBCCCE
T ss_pred             CCCCceEEEEE-cCCeEEEEECCCCcccccccccEEEEEEEcCCCCCccceEEEEEeecccc-ceeEeeecCCCccEEEE
Confidence            46888999885 5556999999993    3333 37877653222110     00 00  01 12234555677888999


Q ss_pred             EEeecccCCCCcchhhhHH
Q psy8774         378 MEVRGRKGRGRPKKRWMDC  396 (427)
Q Consensus       378 v~a~~~~g~g~p~~~~~~~  396 (427)
                      |||....-..  .+.|++.
T Consensus        96 VRa~~~~~~~--WS~WSqp  112 (120)
T 3cxe_C           96 IRAADVRILN--WSSWSEA  112 (120)
T ss_dssp             EEEEESSSCC--CBCCCCC
T ss_pred             EEeCCCCCCc--cCCCCCc
Confidence            9998666555  7777764

>4go6_A HCF N-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=93.34  E-value=0.36  Score=28.27  Aligned_cols=35  Identities=17%  Similarity=0.361  Sum_probs=28.8

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEE
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHK  130 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~  130 (427)
                      .+|..+++...+.+++.|.|.+.+      ...+|.++...
T Consensus         8 ~~PsrVQLvRAst~sLEv~W~~vp------tA~~YiLQiqk   42 (45)
T 4go6_A            8 PPPARVQLVRANTNSLEVSWGAVA------TADSYLLQLQK   42 (45)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCT------TCSEEEEEEEE
T ss_pred             CCcceEEEEEeccceEEEEcCCCc------chheeEEEEEe
Confidence            468899999999999999999884      45678887764

>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A*

Probab=92.55  E-value=0.11  Score=50.89  Aligned_cols=82  Identities=10%  Similarity=0.091  Sum_probs=51.9

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      |..|.++... .+.++|.|+|+......| +. |.|+....     ..+                               
T Consensus        27 ~t~~~~l~~~-~~~~sv~l~W~a~s~~~g-~~-y~v~~~g~-----~v~-------------------------------   67 (584)
T 3arx_A           27 TSGYNDMVKY-HELAKIKVKFNQWSGTSG-DT-YNVYFDGV-----KVA-------------------------------   67 (584)
T ss_dssp             CCCHHHHEEE-CSSEEEEEEEECCSSCCC-SE-EEEEETTE-----EEE-------------------------------
T ss_pred             CCChhhheec-ccCceEEEEEecccCCCC-eE-EEEEECCE-----EEE-------------------------------
Confidence            4567777555 688999999999984433 44 98865211     000                               


Q ss_pred             cccCCC-CceeccCCCCCCeEEEEEEEEeccCCCCCccceEEe
Q psy8774         266 KSVPLT-ESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK  307 (427)
Q Consensus       266 ~~~~~~-~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~  307 (427)
                      ...... ..+...+|.+++.|.|+|+|++..|+. .|..+.+.
T Consensus        68 t~~~~~~~~~~~~~l~~~~~Y~~~V~a~d~~G~~-~S~~~~v~  109 (584)
T 3arx_A           68 TGAITGSQTTASFEYGQGGLYQMEIEACDATGCS-KSAPVEIT  109 (584)
T ss_dssp             EEECCTTEEEEEEEECCCEEEEEEEEEEETTEEE-ECCCEEEE
T ss_pred             EecCCCCceeEEEeccCCceEEEEEEEEcCCCcc-ccCCcceE
Confidence            111110 233345899999999999999999864 23334444

>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A*

Probab=91.34  E-value=0.36  Score=47.32  Aligned_cols=66  Identities=17%  Similarity=0.191  Sum_probs=44.8

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCcc-ceeEeecCc-ceEEEcCCCCCceEEEEEEEEeccCcCc
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTL-KENLVNSKN-MSFLITNLERGVEYEFRIAGQNHIGYGQ   75 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~-~~~~~~~L~p~t~Y~~~V~a~~~~g~~~   75 (427)
                      +..+..+|.|+|++..+..+ +. |.|..   ++.. ++.  .... ..+...+|.+++.|.|+|+|++..|...
T Consensus        35 ~~~~~~sv~l~W~a~s~~~g-~~-y~v~~---~g~~v~t~--~~~~~~~~~~~~l~~~~~Y~~~V~a~d~~G~~~  102 (584)
T 3arx_A           35 KYHELAKIKVKFNQWSGTSG-DT-YNVYF---DGVKVATG--AITGSQTTASFEYGQGGLYQMEIEACDATGCSK  102 (584)
T ss_dssp             EECSSEEEEEEEECCSSCCC-SE-EEEEE---TTEEEEEE--ECCTTEEEEEEEECCCEEEEEEEEEEETTEEEE
T ss_pred             ecccCceEEEEEecccCCCC-eE-EEEEE---CCEEEEEe--cCCCCceeEEEeccCCceEEEEEEEEcCCCccc
Confidence            34678999999999875433 44 88864   2221 111  2111 2445569999999999999999888644

>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A

Probab=89.22  E-value=18  Score=35.53  Aligned_cols=202  Identities=9%  Similarity=0.000  Sum_probs=101.1

Q ss_pred             CcceEEEcCCCCCceEEEEEEEEeccCcCcccc--eEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeE
Q psy8774          46 KNMSFLITNLERGVEYEFRIAGQNHIGYGQETV--RYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL  123 (427)
Q Consensus        46 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~--~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~  123 (427)
                      ....+.|.++.......|++.|.|..|......  ..+...+..+...|....+.  ....+.|.-....  .   +.  
T Consensus       340 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~--~g~~~~l~C~~~g--~---p~--  410 (642)
T 1e07_A          340 DNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYR--PGVNLSLSCHAAS--N---PP--  410 (642)
T ss_pred             CCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEec--CCCcEEEEEEcCc--c---CC--
Confidence            346788889988888899999999887643222  22222111111122222222  2233444333220  0   11  


Q ss_pred             EEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCce---EEEeeeCc
Q psy8774         124 YNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGV---KALATSDQ  200 (427)
Q Consensus       124 Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l---~~~~~~~~  200 (427)
                      -.+.|...  +..    ......+.|.++.+.....++..|.|..|....+..+.+.... ++.+|.-.   ........
T Consensus       411 ~~i~W~~~--g~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~-~~~~p~i~~~~~~~v~~g~  483 (642)
T 1e07_A          411 AQYSWLID--GNI----QQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSA-ELPKPSISSNNSKPVEDKD  483 (642)
T ss_pred             CeEEEEEC--CEE----cCCCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEec-cCCCceEecCCceeecCCC
Confidence            13444443  111    1123457888888777778888899988765455444444322 11122100   11122345


Q ss_pred             EEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCC
Q psy8774         201 SVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLE  280 (427)
Q Consensus       201 si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~  280 (427)
                      .+.|.+.... +     .-.|.|...+..-....                             ..........+.|.++.
T Consensus       484 ~v~l~C~~~~-~-----~~~i~W~~~g~~l~~~~-----------------------------~~~~~~~~~~L~i~~v~  528 (642)
T 1e07_A          484 AVAFTCEPEA-Q-----NTTYLWWVNGQSLPVSP-----------------------------RLQLSNGNRTLTLFNVT  528 (642)
T ss_pred             eEEEEEECCC-C-----CcEEEEEECCEeCCCCC-----------------------------cEEEcCCCcEEEEeecC
Confidence            6777776552 1     12344444321100000                             00111223467788888


Q ss_pred             CCCeEEEEEEEEeccCCC
Q psy8774         281 KFTEYAVAVAARTVNGLG  298 (427)
Q Consensus       281 p~t~Y~~~V~a~~~~G~g  298 (427)
                      ......++..|.|..|..
T Consensus       529 ~~d~G~Y~C~a~n~~g~~  546 (642)
T 1e07_A          529 RNDARAYVCGIQNSVSAN  546 (642)
T ss_pred             hhcCceEEEEeEcCCCCc
Confidence            777778888888888753

>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1

Probab=88.07  E-value=2.1  Score=40.09  Aligned_cols=48  Identities=13%  Similarity=0.103  Sum_probs=32.4

Q ss_pred             CCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCC-CCCcceEEeecCC
Q psy8774         271 TESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPE-DVPLSLRAHDVST  324 (427)
Q Consensus       271 ~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~-~~P~~l~~~~~~~  324 (427)
                      ...+.|++|+|++.|.++|..    |  ..|....|+|.|. .....+++...++
T Consensus        86 ~~~v~l~gL~p~t~Y~Yrv~~----g--~~s~~~~f~T~p~~~~~~~~~f~~~gD  134 (426)
T 1xzw_A           86 IHHCTIKDLEYDTKYYYRLGF----G--DAKRQFWFVTPPKPGPDVPYVFGLIGD  134 (426)
T ss_dssp             EEEEEECCCCTTCEEEEEECC----G--GGCEEEEEECCCCCCTTCCEEEEEECS
T ss_pred             EEEEEECCCCCCCEEEEEECC----C--CccceeEEECCCCCCCCCCeEEEEEEe
Confidence            446789999999999999965    2  3566778888653 2234455554443

>4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}

Probab=87.46  E-value=1.5  Score=34.32  Aligned_cols=83  Identities=20%  Similarity=0.291  Sum_probs=56.0

Q ss_pred             eeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-eeeeeEEEEccCCCCcEEEEEEEEeeCCCCCC
Q psy8774          94 NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGP  172 (427)
Q Consensus        94 ~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~  172 (427)
                      -+.+..++.++..+.|+|..  -....+.. .|-|+..  -...... .-..+...|.+|.-++.|.|++......|. -
T Consensus        74 vlkivnvtqtscvlawdplk--lgsaklks-lilyrkg--irsmvipnpfkvtttkisglsvdtpyefqlklittsgt-l  147 (290)
T 4gns_A           74 VLKIVNVTQTSCVLAWDPLK--LGSAKLKS-LILYRKG--IRSMVIPNPFKVTTTKISGLSVDTPYEFQLKLITTSGT-L  147 (290)
T ss_dssp             CEEEEEECSSCEEEEECCCC--CSSSCEEE-EEEESSS--TTSCBCSCTTTCCEEEECSCCTTCEEEEEEEEEETTEE-E
T ss_pred             eEEEEeeccceEEEEeCccc--cchHHhhh-hhhhhhc--ceeeecCCCeeEEEEEecceecCCcceeEEEEEeccCc-e
Confidence            56778899999999999884  22234433 3334432  1111111 123667789999999999999999877665 3


Q ss_pred             CCCCeEEEcc
Q psy8774         173 WSPKLSLMTA  182 (427)
Q Consensus       173 ~s~~~~~~t~  182 (427)
                      ||+.+..+|.
T Consensus       148 wsekvilrth  157 (290)
T 4gns_A          148 WSEKVILRTH  157 (290)
T ss_dssp             EEEEEEEECC
T ss_pred             ehhheeeeec
Confidence            7888888773

>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*

Probab=86.93  E-value=6.1  Score=36.84  Aligned_cols=96  Identities=13%  Similarity=0.123  Sum_probs=54.5

Q ss_pred             CCeeeEEEeec--CCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE----E--------eeeeeEEEEccCCCCc
Q psy8774          91 PPANISHHFQT--PDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH----R--------NTTQTKAVFSNLEEGI  156 (427)
Q Consensus        91 ~p~~~~~~~~~--~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~----~--------~~~~~~~~i~~L~p~t  156 (427)
                      .|..+.+....  .+++.|+|.....  ..    .-.|+|....+......    .        ..-...+.|++|.|++
T Consensus        18 ~P~~v~l~~~~~~~~~~~v~W~t~~~--~~----~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t   91 (424)
T 2qfp_A           18 APQQVHITQGDLVGRAMIISWVTMDE--PG----SSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNT   91 (424)
T ss_dssp             CCEEEEEEECSSSSSCEEEEEEESSS--CC----CCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTC
T ss_pred             CCceEEEEecCCCCCeEEEEEECCCC--CC----CCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCC
Confidence            57788877543  4789999997531  11    22455655422211111    0        0114567899999999


Q ss_pred             EEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeC
Q psy8774         157 EYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSD  199 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~  199 (427)
                      .|.++|..-      ..|....++|...+ .....+++...++
T Consensus        92 ~Y~Yrv~~~------~~s~~~~f~T~p~~-~~~~~~~f~~igD  127 (424)
T 2qfp_A           92 KYYYEVGLR------NTTRRFSFITPPQT-GLDVPYTFGLIGD  127 (424)
T ss_dssp             EEEEEECCS------SSCEEEEEECCCCC-CTTCCEEEEEECS
T ss_pred             EEEEEECCC------CccceEEEECCCCC-CCCCCeEEEEEEe
Confidence            999998542      24566677774321 1223445544443

>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A*

Probab=86.79  E-value=12  Score=36.91  Aligned_cols=115  Identities=12%  Similarity=0.111  Sum_probs=70.7

Q ss_pred             ceEEEcCCCCCceEEEEEEEEeccCcCcc----cceEEeCCCCCCCCCCeeeEEEee---c--CCEEEEEeeCCCCCCCC
Q psy8774          48 MSFLITNLERGVEYEFRIAGQNHIGYGQE----TVRYYTTPEGPPTGPPANISHHFQ---T--PDVVCITWDPPLRTHRN  118 (427)
Q Consensus        48 ~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~----~~~~~~t~~~~p~~~p~~~~~~~~---~--~~~v~v~W~~p~~~~~~  118 (427)
                      ..+.|..|...+.+.+.++..+.......    ..+.+... ..++.+|.++.+...   +  ...+.|+|+..      
T Consensus       496 ~~~~ls~~~G~~i~~I~l~~~~~~~~~~y~~~lG~l~i~~~-~~~p~~p~~~~v~~~~~~~~~~~~~~l~W~~~------  568 (653)
T 2w91_A          496 EEFDLSSLAGKTIYAVKLFFEHEGAVKDYQFNLGQLTISDN-HQEPQSPTSFSVVKQSLKNAQEAEAVVQFKGN------  568 (653)
T ss_dssp             EEEECGGGTTCEEEEEEEEEEESSCEEEEEEEEEEEEEESC-CSCCCCCEEEEEEEEEEEETTEEEEEEEEECC------
T ss_pred             EEEEecccCCCEeeeEEEEEeCCCCccceeEEEeeEEEeCC-CCCCCCCceEEEEEEEecCCceEeEEEEeccC------
Confidence            45667677777888888887774321111    12233333 334556888887643   2  24799999973      


Q ss_pred             cceeEEEEEEEEccCCCceEEEeeeeeEEEEccCC-----CCcEEEEEEEEeeCCCCC
Q psy8774         119 GQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLE-----EGIEYSAEVQAITKAGPG  171 (427)
Q Consensus       119 ~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~-----p~t~Y~~~V~a~~~~g~~  171 (427)
                      +.+.+|.|++. . ++.....-......+-+.+|.     .++.-.|.|+|++..|..
T Consensus       569 ~~v~~yeIy~~-~-~g~~~~lG~t~~~a~yv~~l~~~~~~~~~~~~~~V~aV~~d~~~  624 (653)
T 2w91_A          569 KDADFYEVYEK-D-GDSWKLLTGSSSTTIYLPKVSRSASAQGTTQELKVVAVGKNGVR  624 (653)
T ss_dssp             TTEEEEEEEEE-E-TTEEEEEEEESSSEEEEEEEECCTTCCSSEEEEEEEEEETTSCB
T ss_pred             CCcceEEEEEE-C-CCCeEEEeeeeccEEEEeccccccccCccceEEEEEEeCCCcCc
Confidence            56889999988 2 233333333445555555543     334789999999887763

>4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}

Probab=86.77  E-value=2.9  Score=32.63  Aligned_cols=88  Identities=18%  Similarity=0.276  Sum_probs=57.7

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      |..| -+++.+++.++..+.|++.......+.... .|+..    ....                             ..
T Consensus        70 pesp-vlkivnvtqtscvlawdplklgsaklksli-lyrkg----irsm-----------------------------vi  114 (290)
T 4gns_A           70 PESP-VLKIVNVTQTSCVLAWDPLKLGSAKLKSLI-LYRKG----IRSM-----------------------------VI  114 (290)
T ss_dssp             CCCC-CEEEEEECSSCEEEEECCCCCSSSCEEEEE-EESSS----TTSC-----------------------------BC
T ss_pred             CCCc-eEEEEeeccceEEEEeCccccchHHhhhhh-hhhhc----ceee-----------------------------ec
Confidence            4444 468888899999999999885544554444 45432    1111                             00


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                      ...-..+...+++|.-.+.|.|++......|. .||+.+..+|.
T Consensus       115 pnpfkvtttkisglsvdtpyefqlklittsgt-lwsekvilrth  157 (290)
T 4gns_A          115 PNPFKVTTTKISGLSVDTPYEFQLKLITTSGT-LWSEKVILRTH  157 (290)
T ss_dssp             SCTTTCCEEEECSCCTTCEEEEEEEEEETTEE-EEEEEEEEECC
T ss_pred             CCCeeEEEEEecceecCCcceeEEEEEeccCc-eehhheeeeec
Confidence            01112345668999999999999999988764 56776776653

>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*

Probab=86.67  E-value=2.6  Score=39.43  Aligned_cols=47  Identities=13%  Similarity=0.199  Sum_probs=31.2

Q ss_pred             CCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCC-CCcceEEeecC
Q psy8774         271 TESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED-VPLSLRAHDVS  323 (427)
Q Consensus       271 ~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~-~P~~l~~~~~~  323 (427)
                      ...+.|++|+|++.|.++|..-      ..|....|+|.|.. +...+++...+
T Consensus        79 ~~~v~l~gL~p~t~Y~Yrv~~~------~~s~~~~f~T~p~~~~~~~~~f~~ig  126 (424)
T 2qfp_A           79 IHHTTIRKLKYNTKYYYEVGLR------NTTRRFSFITPPQTGLDVPYTFGLIG  126 (424)
T ss_dssp             EEEEEECSCCTTCEEEEEECCS------SSCEEEEEECCCCCCTTCCEEEEEEC
T ss_pred             EEEEEECCCCCCCEEEEEECCC------CccceEEEECCCCCCCCCCeEEEEEE
Confidence            3467899999999999998642      24566778886532 22345554443

>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A*

Probab=85.65  E-value=6.1  Score=38.98  Aligned_cols=77  Identities=12%  Similarity=0.147  Sum_probs=49.1

Q ss_pred             eeEEEEccCCCCcEEEEEEEEeeCCCCCCCC---CCeEEEcccccCCCCCceEEEeee---C--cEEEEEeeeCCCCCCc
Q psy8774         144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWS---PKLSLMTARDMVRAPLGVKALATS---D--QSVEVWWKPVPAGRGK  215 (427)
Q Consensus       144 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s---~~~~~~t~~~~p~~p~~l~~~~~~---~--~si~v~W~~p~~~~g~  215 (427)
                      ...+.|..|.-.+.+.|.++..+........   -.+.+.....+|..|.++++....   .  -.+.|+|+.    ++.
T Consensus       495 ~~~~~ls~~~G~~i~~I~l~~~~~~~~~~y~~~lG~l~i~~~~~~p~~p~~~~v~~~~~~~~~~~~~~l~W~~----~~~  570 (653)
T 2w91_A          495 NEEFDLSSLAGKTIYAVKLFFEHEGAVKDYQFNLGQLTISDNHQEPQSPTSFSVVKQSLKNAQEAEAVVQFKG----NKD  570 (653)
T ss_dssp             EEEEECGGGTTCEEEEEEEEEEESSCEEEEEEEEEEEEEESCCSCCCCCEEEEEEEEEEEETTEEEEEEEEEC----CTT
T ss_pred             EEEEEecccCCCEeeeEEEEEeCCCCccceeEEEeeEEEeCCCCCCCCCceEEEEEEEecCCceEeEEEEecc----CCC
Confidence            3456677777778888888877643111010   012233334456778888887542   2  479999997    367


Q ss_pred             eeEEEEEEE
Q psy8774         216 ILGYQIFYT  224 (427)
Q Consensus       216 i~~Y~I~~~  224 (427)
                      +..|+|++.
T Consensus       571 v~~yeIy~~  579 (653)
T 2w91_A          571 ADFYEVYEK  579 (653)
T ss_dssp             EEEEEEEEE
T ss_pred             cceEEEEEE
Confidence            899999887

>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A*

Probab=84.32  E-value=1.9  Score=41.71  Aligned_cols=67  Identities=15%  Similarity=0.168  Sum_probs=45.9

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCc-cceeEeecC-cceEEEcCCCCCceEEEEEEEEeccCcCc
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHT-LKENLVNSK-NMSFLITNLERGVEYEFRIAGQNHIGYGQ   75 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~-~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~   75 (427)
                      +...+..+|.|+|+......+  ..|.|..   ++. .++.  +.. .......+|.+++.|.|+|++++..|.+.
T Consensus        31 v~~~~~~~v~lsW~~~s~~~g--~~~~v~~---dg~~v~t~--~~~~~~~~~~~~~~~~g~y~~~v~a~d~~G~s~   99 (540)
T 1edq_A           31 VKVKNAADVSVSWNLWNGDTG--TTAKVLL---NGKEAWSG--PSTGSSGTANFKVNKGGRYQMQVALCNADGCTA   99 (540)
T ss_dssp             EEECSSEEEEEEEECCSSCCC--SEEEEEE---TTEEEEEE--ECCSSEEEEEEEECSCEEEEEEEEEEETTEEEE
T ss_pred             hccccceEEEEeccCCCCCCc--cEEEEEE---CCEEEEEE--cCCCCcceEEEeecCCceEEEEEEEEcCCCCcc
Confidence            445778999999999874332  3488763   222 1221  122 14566789999999999999999988654

>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1

Probab=83.19  E-value=8.8  Score=35.74  Aligned_cols=97  Identities=12%  Similarity=0.123  Sum_probs=56.0

Q ss_pred             CCCeeeEEEeec--CCEEEEEeeCC-CCCCCCcceeEEEEEEEEccCCCceEEE------------eeeeeEEEEccCCC
Q psy8774          90 GPPANISHHFQT--PDVVCITWDPP-LRTHRNGQIVLYNVKFHKKIDANNVIHR------------NTTQTKAVFSNLEE  154 (427)
Q Consensus        90 ~~p~~~~~~~~~--~~~v~v~W~~p-~~~~~~~~i~~Y~v~~~~~~~~~~~~~~------------~~~~~~~~i~~L~p  154 (427)
                      ..|..+.+....  .+++.|.|... ...  ..    -.|+|....+.......            ..-...+.|++|.|
T Consensus        23 ~~p~~v~l~~~~~~~~~~~v~W~t~~~~~--~~----~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p   96 (426)
T 1xzw_A           23 NAPQQVHITQGDYEGRGVIISWTTPYDKA--GA----NKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEY   96 (426)
T ss_dssp             TCCEEEEEEECSSSSSCEEEEEEESSCCT--TT----TEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCT
T ss_pred             CCCceEEEEECCCCCCeEEEEEEeCCCCC--CC----CEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCC
Confidence            468788877654  58899999875 311  11    13555554222111110            01145678999999


Q ss_pred             CcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeC
Q psy8774         155 GIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSD  199 (427)
Q Consensus       155 ~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~  199 (427)
                      ++.|.++|..    |  .+|....++|...+ .....+++...++
T Consensus        97 ~t~Y~Yrv~~----g--~~s~~~~f~T~p~~-~~~~~~~f~~~gD  134 (426)
T 1xzw_A           97 DTKYYYRLGF----G--DAKRQFWFVTPPKP-GPDVPYVFGLIGD  134 (426)
T ss_dssp             TCEEEEEECC----G--GGCEEEEEECCCCC-CTTCCEEEEEECS
T ss_pred             CCEEEEEECC----C--CccceeEEECCCCC-CCCCCeEEEEEEe
Confidence            9999999864    2  25666777774321 2334455555444

>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A* 1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A* 2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A*

Probab=82.11  E-value=1.9  Score=41.73  Aligned_cols=80  Identities=15%  Similarity=0.215  Sum_probs=50.3

Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccc
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKS  267 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (427)
                      ...++ +...+..+|.|+|+.-....|.  .|.|+.-..     ..+                               ..
T Consensus        26 ~y~~l-v~~~~~~~v~lsW~~~s~~~g~--~~~v~~dg~-----~v~-------------------------------t~   66 (540)
T 1edq_A           26 AYNNL-VKVKNAADVSVSWNLWNGDTGT--TAKVLLNGK-----EAW-------------------------------SG   66 (540)
T ss_dssp             SHHHH-EEECSSEEEEEEEECCSSCCCS--EEEEEETTE-----EEE-------------------------------EE
T ss_pred             hhHhh-hccccceEEEEeccCCCCCCcc--EEEEEECCE-----EEE-------------------------------EE
Confidence            44555 5556888999999998843332  388854211     001                               01


Q ss_pred             cCC-CCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEe
Q psy8774         268 VPL-TESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK  307 (427)
Q Consensus       268 ~~~-~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~  307 (427)
                      ... .......+|.+++.|.|+|+|++..|++. |..+.+.
T Consensus        67 ~~~~~~~~~~~~~~~~g~y~~~v~a~d~~G~s~-S~~~~v~  106 (540)
T 1edq_A           67 PSTGSSGTANFKVNKGGRYQMQVALCNADGCTA-SDATEIV  106 (540)
T ss_dssp             ECCSSEEEEEEEECSCEEEEEEEEEEETTEEEE-CCCEEEE
T ss_pred             cCCCCcceEEEeecCCceEEEEEEEEcCCCCcc-CCceEEE
Confidence            111 12455678999999999999999998753 4444444

>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}

Probab=81.02  E-value=19  Score=36.52  Aligned_cols=117  Identities=14%  Similarity=0.095  Sum_probs=62.7

Q ss_pred             cceEEEcCCC-CCceEEEEEEEEeccCcCcccce--EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeE
Q psy8774          47 NMSFLITNLE-RGVEYEFRIAGQNHIGYGQETVR--YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVL  123 (427)
Q Consensus        47 ~~~~~~~~L~-p~t~Y~~~V~a~~~~g~~~~~~~--~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~  123 (427)
                      ..++.|.++. ......|++.|.|..|.......  .+...+...+..+....  ......+.|.+....     ++ ..
T Consensus       578 ~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~--~~~G~~v~L~C~~~~-----~~-~~  649 (816)
T 3dmk_A          578 NGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGP--AQVGQYLTLHCSVPG-----GD-LP  649 (816)
T ss_dssp             TSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSC--EESSCEEEEEEBCCC-----SS-SC
T ss_pred             CCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccc--cCCCCeEEEEEEEeC-----CC-CC
Confidence            4467888886 56677788999998885543222  22222211111111211  223456777776541     00 01


Q ss_pred             EEEEEEEccCCC----ceEEE--eeeeeEEEEccCCCCcEEEEEEEEeeCCCCC
Q psy8774         124 YNVKFHKKIDAN----NVIHR--NTTQTKAVFSNLEEGIEYSAEVQAITKAGPG  171 (427)
Q Consensus       124 Y~v~~~~~~~~~----~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~  171 (427)
                      ..|.|...+..-    .....  ......+.|.++.......++..|.|..|..
T Consensus       650 ~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~  703 (816)
T 3dmk_A          650 LNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQ  703 (816)
T ss_dssp             CEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred             CEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccE
Confidence            234454442111    01111  1224668889998888888888999987764

>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A

Probab=80.11  E-value=34  Score=35.00  Aligned_cols=124  Identities=12%  Similarity=0.109  Sum_probs=73.2

Q ss_pred             CcceEEEcCCCCCceEEEEEEEEeccCcCc----ccceEEeCCCCCCCCCCeeeEEEee---cC--CEEEEEeeCCCCCC
Q psy8774          46 KNMSFLITNLERGVEYEFRIAGQNHIGYGQ----ETVRYYTTPEGPPTGPPANISHHFQ---TP--DVVCITWDPPLRTH  116 (427)
Q Consensus        46 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~----~~~~~~~t~~~~p~~~p~~~~~~~~---~~--~~v~v~W~~p~~~~  116 (427)
                      ...++.|.+|..-+.+.|.++..+......    -..+.+.-... .|.+|..+.+...   +.  ..+.++|+..    
T Consensus       645 t~~t~dLs~laGktI~~IgL~~~~~~~~~~Y~~~lG~LaI~d~~~-~P~aP~~~~V~~~~~~~~~~a~~~l~w~~~----  719 (937)
T 3gdb_A          645 TNEEFDLSSLAGKTIYAVKLFFEHEGAVKDYQFNLGQLTISDNHQ-EPQSPTSFSVVKQSLKNAQEAEAVVQFKGN----  719 (937)
T ss_dssp             EEEEEECGGGTTCEEEEEEEEEEESSCEEEEEEEEEEEEEESCCC-CCCCCEEEEEEEEEEEETTEEEEEEEEECC----
T ss_pred             EEEEEEccccCCCEEEEEEEEEeCCCCccceeEEEeeEEecCCCC-CCCCCceEEeeeeecccCceeeEEEEecCC----
Confidence            344577888877778888888886643211    11223333333 3457888887532   22  3567888854    


Q ss_pred             CCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccC-----CCCcEEEEEEEEeeCCCCCCCCCCeE
Q psy8774         117 RNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNL-----EEGIEYSAEVQAITKAGPGPWSPKLS  178 (427)
Q Consensus       117 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L-----~p~t~Y~~~V~a~~~~g~~~~s~~~~  178 (427)
                        ..+..|.|+....  +............+-+..|     ..++...|.|.|++..|....+..+.
T Consensus       720 --~d~~~YEIY~~~~--~~~~~Lggt~~~~~Yv~~~~R~~~~~~~~~~~~VvaV~~dg~rs~~~t~~  782 (937)
T 3gdb_A          720 --KDADFYEVYEKDG--DSWKLLTGSSSTTIYLPKVSRSASAQGTTQELKVVAVGKNGVRSEAATTT  782 (937)
T ss_dssp             --TTEEEEEEEEEET--TEEEEEEEESSSEEEEEEEECCTTCCSSEEEEEEEEEETTSCBCCCEEEE
T ss_pred             --CCcceEEEEEECC--CCcEEEEEeecceEEeecccccccccCcEEEEEEEEeCCCCCcCCceeEE
Confidence              3588999987755  2222222233444444444     34678999999999877643333333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	427
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	5e-17
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	1e-11
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	6e-05
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	0.002
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	6e-17
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	2e-06
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	3e-06
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	4e-16
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	2e-07
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	3e-04
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	2e-14
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	1e-07
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	4e-06
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	3e-14
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	3e-08
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	1e-06
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	5e-14
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	8e-09
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	6e-07
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	3e-13
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	1e-06
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	5e-05
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	9e-13
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	5e-07
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	5e-05
d1cfba2	105	b.1.2.1 (A:710-814) Neuroglian, two amino proximal	1e-11
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	2e-11
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	3e-06
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	4e-06
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	3e-11
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	7e-07
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	3e-04
d1x3da1	105	b.1.2.1 (A:8-112) Fibronectin type-III domain cont	3e-11
d1x3da1	105	b.1.2.1 (A:8-112) Fibronectin type-III domain cont	3e-06
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	1e-10
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	1e-07
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	0.003
d2crma1	107	b.1.2.1 (A:8-114) Fibronectin type-III domain cont	7e-10
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	9e-10
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	2e-06
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	1e-05
d1x5xa1	96	b.1.2.1 (A:8-103) Fibronectin type-III domain cont	9e-10
d1x5xa1	96	b.1.2.1 (A:8-103) Fibronectin type-III domain cont	1e-04
d2crza1	97	b.1.2.1 (A:8-104) Fibronectin type-III domain cont	1e-09
d2crza1	97	b.1.2.1 (A:8-104) Fibronectin type-III domain cont	3e-07
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	1e-09
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	0.001
d1x5ja1	100	b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [	2e-09
d1wf5a1	108	b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens)	3e-09
d1wf5a1	108	b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens)	1e-07
d2cspa1	117	b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Ho	4e-09
d1x5aa1	94	b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse	1e-08
d1x5aa1	94	b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse	0.001
d1wfta_	123	b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus	1e-08
d1wfta_	123	b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus	6e-08
d1wfta_	123	b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus	5e-07
d3d48r2	104	b.1.2.1 (R:101-204) Prolactin receptor {Human (Hom	1e-08
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	1e-08
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	2e-05
d1x5ya1	98	b.1.2.1 (A:8-105) Myosin binding protein C, fast-t	2e-08
d1x5ya1	98	b.1.2.1 (A:8-105) Myosin binding protein C, fast-t	3e-04
d1f6fb2	103	b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattu	2e-08
d1f6fb2	103	b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattu	4e-04
d2djsa1	95	b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human	3e-08
d2djsa1	95	b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human	4e-04
d2djsa1	95	b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human	0.002
d1n26a3	104	b.1.2.1 (A:196-299) Interleukin-6 receptor alpha c	6e-08
d1x4xa1	93	b.1.2.1 (A:8-100) Fibronectin type-III domain cont	7e-08
d1qg3a1	92	b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Hum	8e-08
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	1e-07
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	1e-04
d1wfua_	120	b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat	2e-07
d1wj3a_	117	b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo s	2e-07
d1ueya_	127	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	2e-07
d1ueya_	127	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	2e-06
d1bqua2	115	b.1.2.1 (A:100-214) Cytokine receptor gp130 cytoki	2e-07
d1bqua2	115	b.1.2.1 (A:100-214) Cytokine receptor gp130 cytoki	2e-04
d1uc6a_	109	b.1.2.1 (A:) Ciliary neurotrophic factor receptor	5e-07
d1fnfa1	94	b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 m	5e-07
d1fnfa1	94	b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 m	2e-04
d1ujta_	120	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	6e-07
d1ujta_	120	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	3e-06
d1ujta_	120	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	0.001
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	7e-07
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	0.002
d1iarb2	101	b.1.2.1 (B:97-197) Interleukin-4 receptor alpha ch	8e-07
d1tdqa2	92	b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicu	1e-06
d1tdqa2	92	b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicu	1e-04
d2b5ib2	104	b.1.2.1 (B:104-207) Interleukin-2 receptor beta ch	1e-06
d1qr4a1	87	b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus)	1e-06
d1qr4a1	87	b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus)	4e-04
d2dtge1	102	b.1.2.1 (E:808-909) Insulin receptor {Human (Homo	2e-06
d2dtge3	125	b.1.2.1 (E:468-592) Insulin receptor {Human (Homo	2e-06
d2dtge3	125	b.1.2.1 (E:468-592) Insulin receptor {Human (Homo	3e-04
d2cuma1	93	b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens)	3e-06
d2cuma1	93	b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens)	2e-05
d1tdqa3	86	b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegic	5e-06
d1cd9b2	106	b.1.2.1 (B:108-213) Granulocyte colony-stimulating	6e-06
d1bpva_	104	b.1.2.1 (A:) Type I titin module {Human (Homo sapi	7e-06
d1fnfa2	91	b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 m	9e-06
d1fnfa2	91	b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 m	0.001
d1wk0a_	137	b.1.2.1 (A:) Fibronectin type-III domain containin	1e-05
d1wk0a_	137	b.1.2.1 (A:) Fibronectin type-III domain containin	2e-05
d1fnaa_	91	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	1e-05
d1fnaa_	91	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	0.003
d1k85a_	88	b.1.2.1 (A:) Fibronectin type III domain from chit	2e-05
d2d9qb2	105	b.1.2.1 (B:204-308) Granulocyte colony-stimulating	3e-05
d1j8ka_	94	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	3e-05
d1j8ka_	94	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	3e-04
d1qr4a2	88	b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu	3e-05
d1qr4a2	88	b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu	0.001
d1fnfa3	89	b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m	5e-05
d1fnfa3	89	b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m	5e-05
d1qg3a2	103	b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Hum	5e-05
d1qg3a2	103	b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Hum	0.004
d1bqua1	95	b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-	5e-05
d2ibga1	95	b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit	5e-05
d1fnha1	90	b.1.2.1 (A:3-92) Fibronectin, different Fn3 module	5e-05
d1fnha1	90	b.1.2.1 (A:3-92) Fibronectin, different Fn3 module	0.002
d1axib2	106	b.1.2.1 (B:131-236) Growth hormone receptor {Human	8e-05
d1fyhb1	98	b.1.2.1 (B:12-109) Interferon-gamma receptor alpha	1e-04
d1v5ja_	108	b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId	2e-04
d1x5ia1	113	b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [	2e-04
d2ic2a1	107	b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit	2e-04
d2ic2a1	107	b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit	9e-04
d1cfba1	100	b.1.2.1 (A:610-709) Neuroglian, two amino proximal	3e-04
d1owwa_	93	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	4e-04
d1fnha2	90	b.1.2.1 (A:93-182) Fibronectin, different Fn3 modu	4e-04
d1tena_	90	b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId	7e-04
d1fnha3	89	b.1.2.1 (A:183-271) Fibronectin, different Fn3 mod	7e-04
d1fnha3	89	b.1.2.1 (A:183-271) Fibronectin, different Fn3 mod	0.001
d2haza1	101	b.1.2.1 (A:489-589) Neural cell adhesion molecule	8e-04
d3d85d3	94	b.1.2.1 (D:212-305) The p40 domain of interleukin-	8e-04
d2cuia1	101	b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens)	0.001
d2cuha1	102	b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens)	0.002
d1tdqa1	93	b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus)	0.002
d2vkwa2	93	b.1.2.1 (A:601-693) Neural cell adhesion molecule	0.004
d2fnba_	95	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	0.004
d1y6kr1	99	b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10	0.004

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (187), Expect = 5e-17
 Identities = 29/184 (15%), Positives = 49/184 (26%), Gaps = 13/184 (7%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
            I L W  P+   G I  Y V +        E+    +    L         +      +
Sbjct: 18  QIILKWKPPSDPNGNITHYLVFW----ERQAEDSELFELDYCLKGLKLPSRTWSPPFESE 73

Query: 69  NHIGYGQ--ETVRYYTTPEGPPTGP-----PANISHHFQTPDVVCITWDPPLRTHRNGQI 121
           +   + Q             P T           S      D +      P       + 
Sbjct: 74  DSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVP--RPSRKRR 131

Query: 122 VLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
            L +V      + +    +   +   V S L     Y  E+QA  +  P       + ++
Sbjct: 132 SLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVS 191

Query: 182 ARDM 185
           AR M
Sbjct: 192 ARTM 195

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (148), Expect = 1e-11
 Identities = 22/224 (9%), Positives = 57/224 (25%), Gaps = 34/224 (15%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
             P +      +   + + W PP  +  NG I  Y V + ++ + + +          + 
Sbjct: 4   SVPLDPISVSNSSSQIILKWKPP--SDPNGNITHYLVFWERQAEDSEL----FELDYCLK 57

Query: 150 SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPV 209
                   +S   ++           + S        +    +          + +   +
Sbjct: 58  GLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYL 117

Query: 210 PAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVP 269
                     +                             +     A  + +    + V 
Sbjct: 118 HNVVFVPRPSRKRR-------------------------SLGDVGNAGNNEEHRPFEKVV 152

Query: 270 LTESAELTSLEKFTEYAVAVAARTVNGLGR---LSGKVTVKVKP 310
             ES  ++ L  FT Y + + A   +       ++  V+ +  P
Sbjct: 153 NKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (96), Expect = 6e-05
 Identities = 9/69 (13%), Positives = 16/69 (23%)

Query: 7   EVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           E  +  V   P  +        V         +         S +I+ L     Y   + 
Sbjct: 114 EDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQ 173

Query: 67  GQNHIGYGQ 75
             N     +
Sbjct: 174 ACNQDTPEE 182

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 13/152 (8%), Positives = 33/152 (21%), Gaps = 37/152 (24%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
            PL   +++ S   + + WKP     G I  Y +F+   A +         +        
Sbjct: 5   VPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFELDYCLKGL----- 59

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                                ++    +       +   + +  
Sbjct: 60  -------------------------------KLPSRTWSPPFESEDSQKHNQSEYEDSAG 88

Query: 308 VKPEDVP-LSLRAHDVSTHSMTLSWSPPIKLN 338
                    S    ++   S   ++   +   
Sbjct: 89  ECCSCPKTDSQILKELEESSFRKTFEDYLHNV 120

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 6e-17
 Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 2/110 (1%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--IH 139
            T    P+  P N+S   +    + I W PP    +NGQI  Y +++ K    ++V    
Sbjct: 5   RTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETL 64

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
            + TQ   +   L+ G EY+  V A+T  G GP +  LS  T    +   
Sbjct: 65  VSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDET 114

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 2e-06
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 9   TIELVWS--QPTQTYGEILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
           +I + W    P    G+I GY+++Y    R+  + E LV+   +S LI  L+RG EY FR
Sbjct: 27  SIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGTEYNFR 86

Query: 65  IAGQNHIGYGQET-VRYYTTPEGPPTGPPA 93
           +A     G G  T      T E        
Sbjct: 87  VAALTINGTGPATDWLSAETFESDLDETRV 116

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 33/137 (24%)

Query: 188 APLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS 245
           AP  +     + +S+ + W+P       G+I GY+I Y   + +     +  S       
Sbjct: 14  APQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQL--- 70

Query: 246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT 305
                   +                        L++ TEY   VAA T+NG G  +  ++
Sbjct: 71  -----SQLI----------------------EGLDRGTEYNFRVAALTINGTGPATDWLS 103

Query: 306 VKVKPEDVPLSLRAHDV 322
            +   E      R  +V
Sbjct: 104 AET-FESDLDETRVPEV 119

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 4e-16
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN----- 136
           +T E  P GPP +++    T   + +TW  P +  +NG I  Y + + +    +N     
Sbjct: 2   STEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSI 61

Query: 137 -VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
             +            NL++  +Y   VQA  +AG GP S +++  T
Sbjct: 62  VEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATT 107

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 2e-07
 Identities = 28/122 (22%), Positives = 41/122 (33%), Gaps = 28/122 (22%)

Query: 188 APLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS 245
            P+ V     + QS++V WK        G I GYQI Y   +     ++S   +  T  S
Sbjct: 11  PPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDS 70

Query: 246 NIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT 305
                                         L +L+KF +Y V V A    G G  S ++ 
Sbjct: 71  E--------------------------VYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEIN 104

Query: 306 VK 307
             
Sbjct: 105 AT 106

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 3e-04
 Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 9/86 (10%)

Query: 9   TIELVWSQPTQTY--GEILGYRVKY------GVREHTLKENLVNSKNMSFLITNLERGVE 60
           +I++ W  P +    G I GY++ Y         ++++ E      +  + + NL++  +
Sbjct: 24  SIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQ 83

Query: 61  YEFRIAGQNHIGYGQET-VRYYTTPE 85
           Y   +   N  G G  +     TT E
Sbjct: 84  YGVVVQAFNRAGTGPSSSEINATTLE 109

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 2e-14
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 79  RYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI 138
           R  T PE    GP  N+  +  +P  + +TW+ P     NG+I  Y + ++ +   +   
Sbjct: 1   RVETQPEVQLPGPAPNLRAYAASPTSITVTWETP--VSGNGEIQNYKL-YYMEKGTDKEQ 57

Query: 139 HRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
             + +      + L++  EYS  V A  K GPG  +P +++ T  D
Sbjct: 58  DVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 103

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 1e-07
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           +I + W  P    GEI  Y++ Y + + T KE  V+  + S+ I  L++  EY FR+   
Sbjct: 26  SITVTWETPVSGNGEIQNYKL-YYMEKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAY 84

Query: 69  NHIGYGQET-VRYYTTPE 85
           N  G G  T      T  
Sbjct: 85  NKHGPGVSTPDVAVRTLS 102

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 4e-06
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 33/124 (26%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
               ++A A S  S+ V W+   +G G+I  Y+++Y                        
Sbjct: 13  PAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYM----------------------- 49

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                     E   +  Q     + S  +  L+K+TEY+  V A   +G G  +  V V+
Sbjct: 50  ----------EKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVR 99

Query: 308 VKPE 311
              +
Sbjct: 100 TLSD 103

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 3e-14
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 83  TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN------- 135
           + E  P   P N+  +     +  + WDP       G +  Y + + K   ++       
Sbjct: 9   SGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHI 68

Query: 136 --NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
              ++    ++T  +   LE    Y+  V+ +   G GP SP     T   
Sbjct: 69  EKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 3e-08
 Identities = 28/132 (21%), Positives = 38/132 (28%), Gaps = 27/132 (20%)

Query: 188 APLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESS 245
           AP  V+    +    EV W PVP    RG + GY+I+Y  T                   
Sbjct: 17  APGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRH--------- 67

Query: 246 NIARIFYTMTAVEDLDEWSQKSVPLTE-SAELTSLEKFTEYAVAVAARTVNGLGRLSGKV 304
                           E    +   ++    L  LE F+ Y + V      G G  S   
Sbjct: 68  ---------------IEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDR 112

Query: 305 TVKVKPEDVPLS 316
                    P S
Sbjct: 113 VFNTPEGSGPSS 124

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 1e-06
 Identities = 21/97 (21%), Positives = 30/97 (30%), Gaps = 14/97 (14%)

Query: 9   TIELVWSQPTQTY--GEILGYRVKY---------GVREHTLKENLVNSKNMSFLITNLER 57
             E+ W         G + GYR+ Y           R    K           ++  LE 
Sbjct: 30  LAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEP 89

Query: 58  GVEYEFRIAGQNHIGYGQET-VRYYTTPEGPPTGPPA 93
              Y   +   N  G G  +  R + TPEG    P +
Sbjct: 90  FSHYTLNVRVVNGKGEGPASPDRVFNTPEGSG--PSS 124

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 5e-14
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 4/100 (4%)

Query: 85  EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-NTT 143
           +  P      I         V + W  P     NG I+ Y +K+++K             
Sbjct: 1   QAAP-SQVVVIRQERAGQTSVSLLWQEP--EQPNGIILEYEIKYYEKDKEMQSYSTLKAV 57

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
            T+A  S L+ G  Y  +V+A T AG G +S  + + T +
Sbjct: 58  TTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGK 97

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 8e-09
 Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREH-TLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
          ++ L+W +P Q  G IL Y +KY  ++      + + +      ++ L+ G  Y F++  
Sbjct: 19 SVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRA 78

Query: 68 QNHIGYGQET-VRYYTTPE 85
          +   G G+ +      T +
Sbjct: 79 RTSAGCGRFSQAMEVETGK 97

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 6e-07
 Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 31/120 (25%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
             + ++       SV + W+      G IL Y+I Y      D +  S  ++        
Sbjct: 6   QVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEK---DKEMQSYSTLK------- 55

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                 +T  A ++ L+  T Y   V ART  G GR S  + V+
Sbjct: 56  ---------------------AVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVE 94

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 3e-13
 Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 5/101 (4%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
            T  G P G P N     ++   + ++W PP    R+  I  Y + +             
Sbjct: 5   ITQTGVP-GQPLNFKAEPESETSILLSWTPP----RSDTIANYELVYKDGEHGEEQRITI 59

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
              T      L+    Y   + A +  G G  + ++S  T 
Sbjct: 60  EPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTM 100

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
          +I L W+ P      I  Y + Y   EH  ++ +      S+ +  L+    Y FR+A +
Sbjct: 26 SILLSWTPPRS--DTIANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAAR 83

Query: 69 NHIGYGQET 77
          +  G G  T
Sbjct: 84 SPQGLGAST 92

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 5e-05
 Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 51/148 (34%)

Query: 161 EVQAITKAG-PGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGY 219
           ++Q IT+ G PG                 PL  KA   S+ S+ + W P       I  Y
Sbjct: 1   DIQVITQTGVPGQ----------------PLNFKAEPESETSILLSWTPPR--SDTIANY 42

Query: 220 QIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSL 279
           ++ Y                                   +  E  + ++    S  L  L
Sbjct: 43  ELVYKDG--------------------------------EHGEEQRITIEPGTSYRLQGL 70

Query: 280 EKFTEYAVAVAARTVNGLGRLSGKVTVK 307
           +  + Y   +AAR+  GLG  + +++ +
Sbjct: 71  KPNSLYYFRLAARSPQGLGASTAEISAR 98

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 9e-13
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 8/106 (7%)

Query: 82  TTPEGPPTGPPANISHHFQ--TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN---- 135
           TT E  PT PP +++   +   P  + + W PP  +  NG+I  Y + +   ++A     
Sbjct: 5   TTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPP--SEANGKITGYIIYYSTDVNAEIHDW 62

Query: 136 NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
            +      +       L     Y  ++QA    G GP S  +   T
Sbjct: 63  VIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRT 108

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 5e-07
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 9   TIELVWSQPTQTYGEILGYRV----KYGVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
           TI + W  P++  G+I GY +          H      V    ++  I  L     Y F+
Sbjct: 29  TIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFK 88

Query: 65  IAGQNHIGYGQET-VRYYTTPE 85
           I  +N  G G  +    + TP+
Sbjct: 89  IQARNSKGMGPMSEAVQFRTPK 110

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 5e-05
 Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 28/119 (23%)

Query: 189 PLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA 248
            + V +     +++ V W+P     GKI GY I+Y+     ++ +W  + +     +   
Sbjct: 17  DVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLT--- 73

Query: 249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                                     ++  L   T Y   + AR   G+G +S  V  +
Sbjct: 74  -------------------------HQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFR 107

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 59.2 bits (142), Expect = 1e-11
 Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 3/91 (3%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIV---LYNVKFHKKIDANNVIHRNTTQ 144
           P   P N+      P+ + I+W P      N       +   +        N    +  Q
Sbjct: 4   PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQ 63

Query: 145 TKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
              V ++    ++Y  +V AI   G    + 
Sbjct: 64  NNIVIADQPTFVKYLIKVVAINDRGESNVAA 94

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 2e-11
 Identities = 24/107 (22%), Positives = 35/107 (32%), Gaps = 6/107 (5%)

Query: 80  YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH 139
              T +  P GPP  I         V + W PP     NG I+ Y +         N   
Sbjct: 13  LERTLDDVP-GPPMGILFPEVRTTSVRLIWQPP--AAPNGIILAYQITHRLNTTTANTAT 69

Query: 140 RNTTQTKA---VFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
                  A     + L+    Y   + A T+ G G  +  L + T +
Sbjct: 70  VEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEK 116

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGV---REHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
           ++ L+W  P    G IL Y++ + +     +T    ++      +  T L+    Y FRI
Sbjct: 36  SVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRI 95

Query: 66  AGQNHIGYGQET-VRYYTTPE 85
             Q   G+G+       TT +
Sbjct: 96  TAQTRKGWGEAAEALVVTTEK 116

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 4e-06
 Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 30/142 (21%)

Query: 167 KAGPG-PWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTM 225
           + G G P  P +   T  D+   P+G+        SV + W+P  A  G IL YQ     
Sbjct: 1   RIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQ----- 55

Query: 226 TAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEY 285
                                   I + +          +   P       T L+  + Y
Sbjct: 56  ------------------------ITHRLNTTTANTATVEVLAPSARQYTATGLKPESVY 91

Query: 286 AVAVAARTVNGLGRLSGKVTVK 307
              + A+T  G G  +  + V 
Sbjct: 92  LFRITAQTRKGWGEAAEALVVT 113

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 3e-11
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK--IDANNVIH 139
            T E  P GP  ++S        + ++W  P    +NG +  Y + + +    +     +
Sbjct: 5   RTHEDVP-GPVGHLSFSEILDTSLKVSWQEP--GEKNGILTGYRISWEEYNRTNTRVTHY 61

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
                 +   + L     Y+ EV A+T  G G  S 
Sbjct: 62  LPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSA 97

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 7e-07
 Identities = 15/81 (18%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVRE--HTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
           ++++ W +P +  G + GYR+ +      +T   + + +  + + +T L     Y   +A
Sbjct: 26  SLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVA 85

Query: 67  GQNHIGYGQETVRYYTTPEGP 87
                G GQ +    ++   P
Sbjct: 86  AMTSKGQGQVSASTISSGVPP 106

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 3e-04
 Identities = 23/130 (17%), Positives = 37/130 (28%), Gaps = 30/130 (23%)

Query: 181 TARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIP 240
           T  D+      +      D S++V W+      G + GY+I +                 
Sbjct: 6   THEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYN------------- 52

Query: 241 LTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRL 300
                                  +     +T    +T L   T Y + VAA T  G G++
Sbjct: 53  -----------------RTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQV 95

Query: 301 SGKVTVKVKP 310
           S        P
Sbjct: 96  SASTISSGVP 105

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 3e-11
 Identities = 15/103 (14%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 81  YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFH-KKIDANNVIH 139
           +TT    P   P       +T + + + W  P  +    +I  + +++   K +      
Sbjct: 4   FTTLSCEP-DIPNPPRIANRTKNSLTLQWKAP--SDNGSKIQNFVLEWDEGKGNGEFCQC 60

Query: 140 RNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
              +Q +   + L   +     + A    G   +S ++   T+
Sbjct: 61  YMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 3e-06
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYG-VREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
           ++ L W  P+    +I  + +++   + +             F IT L   +  +FR++ 
Sbjct: 26  SLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSA 85

Query: 68  QNHIGYGQ--ETVRYYTT 83
           +N  G     E V YYT+
Sbjct: 86  RNDYGTSGFSEEVLYYTS 103

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 1e-10
 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVR-EHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
          T  L W  P +  GE+LGYR++Y    E           +  F +T L +G  Y FR+A 
Sbjct: 15 TALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAA 74

Query: 68 QNHIGYGQETVRYYTTPE 85
          +N  G G+E  +   TPE
Sbjct: 75 KNRAGLGEEFEKEIRTPE 92

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 1e-07
 Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 4/86 (4%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI-DANNVIHRNTTQTKAV 148
           G P  +       +   + W PP      G+++ Y +++ +      N I          
Sbjct: 2   GRPTMMIST-TAMNTALLQWHPP--KELPGELLGYRLQYCRADEARPNTIDFGKDDQHFT 58

Query: 149 FSNLEEGIEYSAEVQAITKAGPGPWS 174
            + L +G  Y   + A  +AG G   
Sbjct: 59  VTGLHKGTTYIFRLAAKNRAGLGEEF 84

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.003
 Identities = 21/117 (17%), Positives = 34/117 (29%), Gaps = 33/117 (28%)

Query: 197 TSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTA 256
           T+  +  + W P     G++LGY++ Y        +                        
Sbjct: 11  TAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI---------------------- 48

Query: 257 VEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDV 313
                          +   +T L K T Y   +AA+   GLG           PED+
Sbjct: 49  ---------DFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEF--EKEIRTPEDL 94

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (128), Expect = 7e-10
 Identities = 19/101 (18%), Positives = 26/101 (25%)

Query: 81  YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR 140
           +TT    P  P               ITWDPP                         +  
Sbjct: 4   FTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY 63

Query: 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
           +    + +   L  G  Y   V  I+  G    S  L + T
Sbjct: 64  SGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 104

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 9e-10
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 3/101 (2%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--NTT 143
           GP    P ++     +   + +TW  P     +G  + Y+V + K+  A   +    +  
Sbjct: 8   GPLPSAPRDVVASLVSTRFIKLTWRTPASDP-HGDNLTYSVFYTKEGIARERVENTSHPG 66

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
           + +    NL     Y   V A  K G G  S  L + T  +
Sbjct: 67  EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 107

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 2e-06
 Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 5/82 (6%)

Query: 9   TIELVWSQPTQTYG-EILGYRVKYGVR--EHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
            I+L W  P      + L Y V Y          EN  +   M   I NL     Y FR+
Sbjct: 26  FIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRV 85

Query: 66  AGQNHIGYGQ--ETVRYYTTPE 85
             QN  G G+    +R  T PE
Sbjct: 86  MAQNKHGSGESSAPLRVETQPE 107

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 1e-05
 Identities = 26/125 (20%), Positives = 40/125 (32%), Gaps = 31/125 (24%)

Query: 188 APLGVKALATSDQSVEVWWK-PVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSN 246
           AP  V A   S + +++ W+ P     G  L Y +FYT                      
Sbjct: 13  APRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEG------------------- 53

Query: 247 IARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV 306
                         +     S P      + +L   T Y   V A+  +G G  S  + V
Sbjct: 54  -----------IARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRV 102

Query: 307 KVKPE 311
           + +PE
Sbjct: 103 ETQPE 107

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (127), Expect = 9e-10
 Identities = 15/95 (15%), Positives = 24/95 (25%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
             PA+          + + W  P  T  +  I        +          +        
Sbjct: 2   SMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTV 61

Query: 150 SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
            NL    +Y  +V A    G    S  +   T  D
Sbjct: 62  KNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 96

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (89), Expect = 1e-04
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNS--KNMSFLITNLERGVEYEFRIA 66
           + L WS+P+ T  +     +     E +          +++++ + NL R  +Y+F++ 
Sbjct: 16 WLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVI 75

Query: 67 GQNHIGYGQ--ETVRYYTTPE 85
            N  G     E V + T P+
Sbjct: 76 AYNSEGKSNPSEVVEFTTCPD 96

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 1e-09
 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 4/99 (4%)

Query: 84  PEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTT 143
           P GP   P             + + W PPL       I  Y+V+               +
Sbjct: 1   PPGPCLPP---RLQGRPKAKEIQLRWGPPLVDG-GSPISCYSVEMSPIEKDEPREVYQGS 56

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
           + +   S+L  G  YS  ++A  K G GP+S K  + TA
Sbjct: 57  EVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTA 95

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 97

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 3e-07
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 9  TIELVWSQPTQTYG-EILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
           I+L W  P    G  I  Y V+    E      +     +   +++L  G  Y FR+  
Sbjct: 18 EIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRA 77

Query: 68 QNHIGYGQ--ETVRYYTTP 84
           N +G+G   E     T P
Sbjct: 78 ANKMGFGPFSEKCDITTAP 96

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.1 bits (126), Expect = 1e-09
 Identities = 13/98 (13%), Positives = 25/98 (25%), Gaps = 4/98 (4%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIV----LYNVKFHKKIDANNVIHRNTT 143
           P   P            + + W     ++ N  I      Y                   
Sbjct: 1   PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGD 60

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
           +     S+L+    Y  ++Q   + G   +S  +   T
Sbjct: 61  RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICET 98

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (82), Expect = 0.001
 Identities = 10/85 (11%), Positives = 30/85 (35%), Gaps = 6/85 (7%)

Query: 7   EVTIELVWSQPTQTYGEILGYRV----KYGVREHTLKENLVNSKNMSFLITNLERGVEYE 62
            + ++ ++   +     I G+ +         +   K+++V        I++L+    Y+
Sbjct: 17  TIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYD 76

Query: 63  FRIAGQNHIGYGQ--ETVRYYTTPE 85
            ++   N  G  +    +   T   
Sbjct: 77  IKMQCFNEGGESEFSNVMICETKAR 101

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (124), Expect = 2e-09
 Identities = 20/97 (20%), Positives = 29/97 (29%), Gaps = 3/97 (3%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ--IVLYNVKFHKKIDANN-VIHRNTTQ 144
           P  PP  +     + D + ITW                Y V++   I AN    + N T 
Sbjct: 1   PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 60

Query: 145 TKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
              + + L+    Y   V          WS      T
Sbjct: 61  LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTT 97

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 3e-09
 Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 6/105 (5%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
                 P  P A +S        + +TW  P     N  ++ Y ++  +      V+  +
Sbjct: 8   RQLPHAPEHPVATLST--VERRAINLTWTKP--FDGNSPLIRYILEMSENNAPWTVLLAS 63

Query: 142 T--TQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
                T      L     Y   + A+   G G +S     ++  +
Sbjct: 64  VDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPE 108

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY--GVREHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
            I L W++P      ++ Y ++        T+    V+ K  S  +  L     Y+FR+ 
Sbjct: 28  AINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLC 87

Query: 67  GQNHIGYGQ--ETVRYYTTPE 85
             N +G GQ  +     + PE
Sbjct: 88  AVNDVGKGQFSKDTERVSLPE 108

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (123), Expect = 4e-09
 Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 5/116 (4%)

Query: 78  VRYYTTPEGPPTGPPANIS-HHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN 136
           V + T P GPP  PP +++     TP  + ++W PP+ T            +        
Sbjct: 1   VEFSTLPAGPP-APPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQR 59

Query: 137 VIHRNTTQTKA---VFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
           V         +       L         V+ ++  G    S   ++     +   P
Sbjct: 60  VAEVIFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPELLVPPTP 115

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.3 bits (119), Expect = 1e-08
 Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKA 147
            +    ++    + P  + +TW      +  G +          ++ +   H+   + + 
Sbjct: 2   ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYEL----HVLNQDEEWHQMVLEPRV 57

Query: 148 VFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
           + + L+    Y   V+ +T  GPGP+SP     T+
Sbjct: 58  LLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTS 92

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.6 bits (81), Expect = 0.001
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 4/78 (5%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
           +EL W+               + + +      +V       L+T L+    Y  R+   
Sbjct: 18 QLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVL--EPRVLLTKLQPDTTYIVRVRTL 75

Query: 69 NHIGYGQ--ETVRYYTTP 84
            +G G       + T+P
Sbjct: 76 TPLGPGPFSPDHEFRTSP 93

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.2 bits (121), Expect = 1e-08
 Identities = 17/120 (14%), Positives = 34/120 (28%), Gaps = 21/120 (17%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKK---------- 131
           ++    P G P+ +    +  D + ++W+PP  T  +G I+ Y+     +          
Sbjct: 2   SSGSSGP-GAPSTVRIS-KNVDGIHLSWEPP--TSPSGNILEYSAYLAIRTAQMQDNPSQ 57

Query: 132 -------IDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
                              Q      +          + A  + G GP +    L     
Sbjct: 58  LVFMRIYCGLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSK 117

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.9 bits (115), Expect = 6e-08
 Identities = 19/129 (14%), Positives = 37/129 (28%), Gaps = 16/129 (12%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
           AP  V+     D  + + W+P  +  G IL Y  +  +   +  D  SQ           
Sbjct: 10  APSTVRISKNVD-GIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQ----------- 57

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                    +    + S        +               ++A+   G G  +    ++
Sbjct: 58  ----LVFMRIYCGLKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQ 113

Query: 308 VKPEDVPLS 316
              +  P S
Sbjct: 114 GNSKSGPSS 122

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 123

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.2 bits (108), Expect = 5e-07
 Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 20/102 (19%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-----------------NSKNMSFL 51
            I L W  PT   G IL Y     +R   +++N                    +  ++  
Sbjct: 22  GIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANA 81

Query: 52  ITNLERGVEYEFRIAGQNHIGYGQET-VRYYTTPE--GPPTG 90
             +        FRI+ +N  GYG  T +R+       GP +G
Sbjct: 82  HIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKSGPSSG 123

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (119), Expect = 1e-08
 Identities = 21/99 (21%), Positives = 33/99 (33%), Gaps = 3/99 (3%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG--QIVLYNVKFHKKIDANNVIHRNTT 143
            PP      +         + I W PP           +LY ++   +  A   IH    
Sbjct: 4   DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQ 63

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGP-GPWSPKLSLMT 181
           QT+    +L  G +Y  +V+     G    WSP   +  
Sbjct: 64  QTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQI 102

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (120), Expect = 1e-08
 Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 4/97 (4%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTT--QTKA 147
           GPP+       T + V ++W P   T        Y ++   +  +N+          T  
Sbjct: 17  GPPSKPQVTDVTKNSVTLSWQPG--TPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLY 74

Query: 148 VFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
               L     Y   V+AI   G    SP    +  +D
Sbjct: 75  TVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQD 111

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 12/85 (14%), Positives = 25/85 (29%), Gaps = 4/85 (4%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMS--FLITNLERGVEYEFRIA 66
           ++ L W   T        Y ++   +  +     V +   +  + +  L     Y F + 
Sbjct: 31  SVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVR 90

Query: 67  GQNHIGYGQ--ETVRYYTTPEGPPT 89
             N  G            T +  P+
Sbjct: 91  AINPQGLSDPSPMSDPVRTQDSGPS 115

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.5 bits (117), Expect = 2e-08
 Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 3/99 (3%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKA 147
           PT  P +++    T     + W PP R    G I  Y V++  +     V        + 
Sbjct: 1   PTSAPQHLTVEDVTDTTTTLKWRPPDRIG-AGGIDGYLVEYCLEGSEEWVPANKEPVERC 59

Query: 148 VF--SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
            F   +L  G      V  +  AG    +  L  +T R+
Sbjct: 60  GFTVKDLPTGARILFRVVGVNIAGRSEPATLLQPVTIRE 98

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (86), Expect = 3e-04
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 9  TIELVWSQPTQT-YGEILGYRVKYGVREHT--LKENLVNSKNMSFLITNLERGVEYEFRI 65
          T  L W  P +   G I GY V+Y +      +  N    +   F + +L  G    FR+
Sbjct: 17 TTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRV 76

Query: 66 AGQNHIGYGQ 75
           G N  G  +
Sbjct: 77 VGVNIAGRSE 86

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.6 bits (117), Expect = 2e-08
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 3/99 (3%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG--QIVLYNVKFHKKIDANNVIHRNTT 143
            PP      +         + + W PP  T        + Y ++   +      IH    
Sbjct: 4   EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTGH 63

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGP-GPWSPKLSLMT 181
           QT+    +L  G +Y  + +     G    WS + S+  
Sbjct: 64  QTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEM 102

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.3 bits (85), Expect = 4e-04
 Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 9  TIELVWSQPT----QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
           + + WS PT    +T    + Y ++    E    E         F + +L  G +Y  +
Sbjct: 22 YLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTGHQTQFKVFDLYPGQKYLVQ 81

Query: 65 IAGQNHIGYGQE 76
             +   GY   
Sbjct: 82 TRCKPDHGYWSR 93

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (116), Expect = 3e-08
 Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 1/95 (1%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
                +     T   + ++W  P + +    +      + K+ +  N     +    A  
Sbjct: 2   STVPIMHQVSATMRSITLSWPQPEQPNGI-ILDYEIRYYEKEHNEFNSSMARSQTNTARI 60

Query: 150 SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
             L  G+ Y  +V+A T AG G +S K+   T  D
Sbjct: 61  DGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD 95

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 4e-04
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAG 67
          +I L W QP Q  G IL Y ++Y  +EH    + +  S+  +  I  L  G+ Y  ++  
Sbjct: 16 SITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRA 75

Query: 68 QNHIGYGQ--ETVRYYTTPE 85
          +   GYG+    + + T  +
Sbjct: 76 RTVAGYGKFSGKMCFQTLTD 95

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (79), Expect = 0.002
 Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 31/124 (25%)

Query: 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNI 247
               +  ++ + +S+ + W       G IL Y+I Y      +                 
Sbjct: 3   TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNE----------------- 45

Query: 248 ARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307
                           S  +   T +A +  L     Y V V ARTV G G+ SGK+  +
Sbjct: 46  --------------FNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQ 91

Query: 308 VKPE 311
              +
Sbjct: 92  TLTD 95

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (113), Expect = 6e-08
 Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHK-KIDANNVIHRNTTQ 144
            PP      ++   + P  + +TW  P   + +   + + +++   +            Q
Sbjct: 3   DPPANI--TVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQ 60

Query: 145 TKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
              V  +   G+ +  +++A  + G G WS
Sbjct: 61  HHCVIHDAWSGLRHVVQLRAQEEFGQGEWS 90

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (112), Expect = 7e-08
 Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 3/92 (3%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
                     ++     + W+ P        +  Y       ++ +  I           
Sbjct: 2   DQCKPPQVTCRSATCAQVNWEVP--LSNGTDVTEY-RLEWGGVEGSMQICYCGPGLSYEI 58

Query: 150 SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
             L     Y   VQA++  G GP+S  ++ +T
Sbjct: 59  KGLSPATTYYCRVQALSVVGAGPFSEVVACVT 90

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 8e-08
 Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 4/92 (4%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
           G P N +        +   W P         +      + +    +     ++       
Sbjct: 3   GAPQNPNAKAAGSRKIHFNWLP----PSGKPMGYRVKYWIQGDSESEAHLLDSKVPSVEL 58

Query: 150 SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
           +NL    +Y  +V A    G GP+S  +S  T
Sbjct: 59  TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRT 90

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.4 bits (112), Expect = 1e-07
 Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT--TQT 145
           P   P   +    +   V +TW P        Q      K  KK+    +       ++ 
Sbjct: 10  PPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRL 69

Query: 146 KAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
               + LE+GI Y   V+A+   G    S 
Sbjct: 70  SVEITGLEKGISYKFRVRALNMLGESEPSA 99

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.0 bits (90), Expect = 1e-04
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 9  TIELVWSQPTQTYGEILGYRVKY----GVREHTLKENLVNSKNMSFLITNLERGVEYEFR 64
          ++ + W         I  +RV+Y     V +  L  + +    +S  IT LE+G+ Y+FR
Sbjct: 26 SVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFR 85

Query: 65 IAGQNHIGYGQ 75
          +   N +G  +
Sbjct: 86 VRALNMLGESE 96

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.3 bits (111), Expect = 2e-07
 Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 3/100 (3%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRT---HRNGQIVLYNVKFHKKIDANNVIHRNTTQ 144
           P   P        T   + + WD   +        Q + ++++       +  +      
Sbjct: 15  PLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYA 74

Query: 145 TKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
           T+ V   LE    Y   ++  + +G   +SP +S+ T R+
Sbjct: 75  TRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (111), Expect = 2e-07
 Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 3/101 (2%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
           TT + PP+ PP N+  +  T   V + W+         ++  Y V +  +  + N +   
Sbjct: 12  TTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFY--RTSSQNNVQVL 68

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
            T   +    L    +Y  EV+A T  G G  S ++ +   
Sbjct: 69  NTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRI 109

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (111), Expect = 2e-07
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 5/93 (5%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY---GVREHTLKENLVNSKNMSFLITNLERGVEYEFRI 65
           +++L W+        I  + ++Y     +          S   +    NL   V Y FR+
Sbjct: 32  SVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRV 91

Query: 66  AGQNHIGYGQ--ETVRYYTTPEGPPTGPPANIS 96
              N IG     E    Y T    P   P +  
Sbjct: 92  MAVNSIGKSLPSEASEQYLTKASEPDKNPTSGP 124

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 2e-06
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 5/109 (4%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRN--GQIVLYNVKFHKKIDANNVIHRNTTQTKA 147
            PP ++    Q    V ++W P    +      I+ Y    HK    ++    + TQT A
Sbjct: 18  NPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTA 77

Query: 148 VFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMV--RAPLGVKA 194
              NL   + YS  V A+   G    S        +     + P    +
Sbjct: 78  Q-LNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPS 125

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} Length = 115

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (110), Expect = 2e-07
 Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 4/111 (3%)

Query: 81  YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHR--NGQIVLYNVKFHKKIDANNVI 138
           Y     PP       S   +   ++ +TW  P           + Y  K           
Sbjct: 1   YKVKPNPPHNLSVINSE--ELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE 58

Query: 139 HRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP 189
              +T++     +L+   EY   ++ + + G G WS      +       P
Sbjct: 59  DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRP 109

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} Length = 115

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 8/92 (8%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVRE----HTLKENLVNSKNMSFLITNLERGVEYEFR 64
            ++L W+ P+     IL Y ++Y  ++      +      S   SF + +L+   EY FR
Sbjct: 22  ILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFR 81

Query: 65  IAGQNHIGYGQE----TVRYYTTPEGPPTGPP 92
           I      G G            T E  P+  P
Sbjct: 82  IRCMKEDGKGYWSDWSEEASGITYEDRPSKEP 113

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 5e-07
 Identities = 17/91 (18%), Positives = 26/91 (28%), Gaps = 4/91 (4%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYN-VKFHKKIDANNVIHRNTTQ 144
            PP             P  + +TW  P          L   +++   I         +  
Sbjct: 9   DPPENV--VARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNG 66

Query: 145 TKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
           T    ++   G EY  +V A      G WS 
Sbjct: 67  TAHTITDAYAGKEYIIQVAAKD-NEIGTWSD 96

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 5e-07
 Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 2/86 (2%)

Query: 88  PTGPPANISHHFQT-PDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTK 146
           P  PP N+         V+ ++W+        G  +       ++ ++   +      + 
Sbjct: 1   PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSS- 59

Query: 147 AVFSNLEEGIEYSAEVQAITKAGPGP 172
             F NL  G+EY+  V  +       
Sbjct: 60  CTFDNLSPGLEYNVSVYTVKDDKESV 85

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 2e-04
 Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 5/78 (6%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTL---KENLVNSKNMSFLITNLERGVEYEFRI 65
           + + W + T    +I GYR+             E +V++   S    NL  G+EY   +
Sbjct: 18 VLTVSWERSTT--PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSV 75

Query: 66 AGQNHIGYGQETVRYYTT 83
                            
Sbjct: 76 YTVKDDKESVPISDTIIP 93

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 6e-07
 Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 9/90 (10%)

Query: 101 TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN------NVIHRNTTQTKAVFSNLEE 154
           TP  V +TW       +   I  Y V + +           N+  +  T+  AV  NL++
Sbjct: 28  TPTTVQVTWTVD---RQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKK 84

Query: 155 GIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
           G+ Y  +V+       G  S   ++ T  +
Sbjct: 85  GVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 3e-06
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 10/91 (10%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHT------LKENLVNSKNMSFLITNLERGVEYE 62
           T+++ W+   Q    I GYRV Y               +       S ++ NL++GV YE
Sbjct: 31  TVQVTWTVDRQP-QFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYE 89

Query: 63  FRIAGQNHIGYGQ--ETVRYYTTPE-GPPTG 90
            ++    +   G   E+    TT E GP +G
Sbjct: 90  IKVRPYFNEFQGMDSESKTVRTTEESGPSSG 120

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 120

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.001
 Identities = 25/119 (21%), Positives = 35/119 (29%), Gaps = 27/119 (22%)

Query: 196 ATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMT 255
             +  +V+V W  V      I GY++ Y  T+        Q                   
Sbjct: 26  VLTPTTVQVTW-TVDRQPQFIQGYRVMYRQTSGLQATSSWQ------------------- 65

Query: 256 AVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP 314
                       VP   SA L +L+K   Y + V        G  S   TV+   E  P
Sbjct: 66  -------NLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESGP 117

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 7e-07
 Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 6/99 (6%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID-----ANN 136
             P   P GPP N+      P  V + + P      +    L   +     +       +
Sbjct: 5   GVPPELP-GPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH 63

Query: 137 VIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
            +            +L     YS  ++ +   G  P S 
Sbjct: 64  QLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQ 102

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (81), Expect = 0.002
 Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 9/86 (10%)

Query: 9   TIELVWSQPTQTYGEILGYRVKY-------GVREHTLKENLVNSKNMSFLITNLERGVEY 61
           ++ L +         I  + V+        G     + +        S  + +L     Y
Sbjct: 26  SVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCY 85

Query: 62  EFRIAGQNHIGYGQ--ETVRYYTTPE 85
            FR+   N +G     +  R   T +
Sbjct: 86  SFRMRQVNIVGTSPPSQPSRKIQTLQ 111

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 8e-07
 Identities = 19/90 (21%), Positives = 28/90 (31%), Gaps = 5/90 (5%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-----NTTQ 144
             P N++ H    D + +TW  P          L         +                
Sbjct: 3   RAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPS 62

Query: 145 TKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
            +   S L+ GI Y A V+A  +A    WS
Sbjct: 63  LRIAASTLKSGISYRARVRAWAQAYNTTWS 92

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.5 bits (104), Expect = 1e-06
 Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 1/85 (1%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
            P N+    +T   + + WD           V+Y+    ++     V       TK   +
Sbjct: 3   APKNLRVGSRTATSLDLEWDNS-EAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLT 61

Query: 151 NLEEGIEYSAEVQAITKAGPGPWSP 175
           +L  G EY   + A+  +     + 
Sbjct: 62  DLVPGTEYGVGISAVMNSKQSIPAT 86

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.1 bits (90), Expect = 1e-04
 Identities = 13/76 (17%), Positives = 23/76 (30%), Gaps = 1/76 (1%)

Query: 9  TIELVWSQPTQTYGE-ILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAG 67
          +++L W        E  + Y    G + H +             +T+L  G EY   I+ 
Sbjct: 16 SLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISA 75

Query: 68 QNHIGYGQETVRYYTT 83
            +            T
Sbjct: 76 VMNSKQSIPATMNART 91

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 1e-06
 Identities = 12/89 (13%), Positives = 26/89 (29%), Gaps = 4/89 (4%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN---NVIHRNTTQTKA 147
            P ++           I+W+    +H   + + +  +            ++     Q   
Sbjct: 5   APISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWI 64

Query: 148 VFSNLEEGIEYSAEVQAITKAG-PGPWSP 175
               L    +Y  +V+     G    WSP
Sbjct: 65  CLETLTPDTQYEFQVRVKPLQGEFTTWSP 93

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 44.1 bits (103), Expect = 1e-06
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 5/84 (5%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
            P ++     T   + + W  P       +   Y + +       N +      T  +  
Sbjct: 2   NPKDLEVSDPTETTLSLRWRRP-----VAKFDRYRLTYVSPSGKKNEMEIPVDSTSFILR 56

Query: 151 NLEEGIEYSAEVQAITKAGPGPWS 174
            L+ G EY+  + A         +
Sbjct: 57  GLDAGTEYTISLVAEKGRHKSKPT 80

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 37.1 bits (85), Expect = 4e-04
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
          T+ L W +P     +   YR+ Y        E  +   + SF++  L+ G EY   +  +
Sbjct: 15 TLSLRWRRP---VAKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAE 71

Query: 69 NHIGYGQETVRYYTT 83
                + T    +T
Sbjct: 72 KGRHKSKPTTIKGST 86

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 2e-06
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 1/98 (1%)

Query: 85  EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-TT 143
           E         ++H     +VV + W  P   +    +   + + +   + +    R    
Sbjct: 1   EAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFA 60

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
             +           YS  ++A + AG G W+       
Sbjct: 61  LERGCRLRGLSPGNYSVRIRATSLAGNGSWTEPTYFYV 98

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 2e-06
 Identities = 17/113 (15%), Positives = 38/113 (33%), Gaps = 8/113 (7%)

Query: 188 APLGVKALATSDQSVEVWW-KPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSN 246
             L    + TS   + + W    P     +LG+ +FY     +++ E+  +         
Sbjct: 4   ELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDAC------ 57

Query: 247 IARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGR 299
                +T+  ++     +           +  L+ +T+YA+ V         R
Sbjct: 58  -GSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDER 109

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 3e-04
 Identities = 11/121 (9%), Positives = 31/121 (25%), Gaps = 31/121 (25%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR---------- 140
                S+   + D + + W+P         ++ + + + +    N               
Sbjct: 4   ELLKFSYIRTSFDKILLRWEPY-WPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSW 62

Query: 141 ---------------NTTQTKAVFSNLEEGIEYSAEVQAITKAG-----PGPWSPKLSLM 180
                          +      +   L+   +Y+  V+ +          G  S  + + 
Sbjct: 63  TVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQ 122

Query: 181 T 181
           T
Sbjct: 123 T 123

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 3e-06
 Identities = 17/84 (20%), Positives = 25/84 (29%), Gaps = 5/84 (5%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
            P ++     TP    +TW  P       +   Y + FH        I      T     
Sbjct: 4   APRDLEAKEVTPRTALLTWTEP-----PVRPAGYLLSFHTPGGQTQEILLPGGITSHQLL 58

Query: 151 NLEEGIEYSAEVQAITKAGPGPWS 174
            L     Y+A +QA+      P  
Sbjct: 59  GLFPSTSYNARLQAMWGQSLLPPV 82

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 2e-05
 Identities = 10/63 (15%), Positives = 17/63 (26%)

Query: 21 YGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRY 80
               GY + +       +E L+     S  +  L     Y  R+               
Sbjct: 26 PVRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTS 85

Query: 81 YTT 83
          +TT
Sbjct: 86 FTT 88

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.6 bits (99), Expect = 5e-06
 Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 5/84 (5%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
            P ++     +   + + W        +G I  Y + F      ++ +     +T    +
Sbjct: 3   SPRDLMVTASSETSISLIWTKA-----SGPIDHYRITFTPSSGISSEVTVPRDRTSYTLT 57

Query: 151 NLEEGIEYSAEVQAITKAGPGPWS 174
           +LE G EY   + A         S
Sbjct: 58  DLEPGAEYIISITAERGRQQSLES 81

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.6 bits (99), Expect = 6e-06
 Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 3/100 (3%)

Query: 87  PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI---HRNTT 143
           PP     +I     +    C+                  +++  ++   N     H  ++
Sbjct: 4   PPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSS 63

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
           + +     L +   Y+ +++ I  + PG WSP    +  R
Sbjct: 64  KDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLR 103

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 7e-06
 Identities = 25/103 (24%), Positives = 29/103 (28%), Gaps = 2/103 (1%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN-NVIHRNTTQTK 146
           P  PP        T   V + W  P  T           K              N  + +
Sbjct: 2   PIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENE 61

Query: 147 AVFSNLEEGIEYSAEVQAITKAGP-GPWSPKLSLMTARDMVRA 188
              S L E   Y   V A   AG   P S     +T RD V A
Sbjct: 62  FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITCRDDVEA 104

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 9e-06
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
           PP ++      PD + +TW PP        +V Y+   +++      +  + +    V +
Sbjct: 3   PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDV--AELSISPSDNAVVLT 60

Query: 151 NLEEGIEYSAEVQAITKAGPGP 172
           NL  G EY   V ++ +     
Sbjct: 61  NLLPGTEYVVSVSSVYEQHEST 82

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.001
 Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTL--KENLVNSKNMSFLITNLERGVEYEFRIA 66
          T+ + W+       ++  + V+Y   ++     E  ++  + + ++TNL  G EY   ++
Sbjct: 16 TMRVTWAP--PPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVS 73

Query: 67 GQNHIGYGQETVRYYTT 83
                          T
Sbjct: 74 SVYEQHESTPLRGRQKT 90

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 137

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 1e-05
 Identities = 20/127 (15%), Positives = 38/127 (29%), Gaps = 9/127 (7%)

Query: 80  YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHR-----NGQIVLYNVKFHKKIDA 134
                E   +     ++        V +TW PP          +    LY  +       
Sbjct: 10  ETKAFEALLSNIVKPVASDI-QARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTG 68

Query: 135 NNVIHR---NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLG 191
            +  ++      +T    ++L+  ++Y A+VQA   +  G  S      T       P  
Sbjct: 69  KDGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNP 128

Query: 192 VKALATS 198
            +    S
Sbjct: 129 PRISGPS 135

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 137

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 2e-05
 Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 11/96 (11%)

Query: 9   TIELVWSQPTQT-YGEILGYRVKYGVREHTLK---------ENLVNSKNMSFLITNLERG 58
           T+ L WS P+    GE     V        L          +++   +  +  + +L+  
Sbjct: 33  TVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLKPA 92

Query: 59  VEYEFRIAGQNHIGYGQET-VRYYTTPEGPPTGPPA 93
           ++Y  ++  + +   G  +    +TT    P  P  
Sbjct: 93  MDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNP 128

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 1e-05
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 3/90 (3%)

Query: 94  NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLE 153
           ++     TP  + I+WD P       +                      +++ A  S L+
Sbjct: 2   DLEVVAATPTSLLISWDAP---AVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLK 58

Query: 154 EGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
            G++Y+  V A+T  G  P S K   +  R
Sbjct: 59  PGVDYTITVYAVTGRGDSPASSKPISINYR 88

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.003
 Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 5/77 (6%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          ++ + W         +  YR+ YG       ++E  V     +  I+ L+ GV+Y   + 
Sbjct: 12 SLLISW---DAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVY 68

Query: 67 GQNHIGYGQETVRYYTT 83
               G    + +  + 
Sbjct: 69 AVTGRGDSPASSKPISI 85

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

 Score = 40.6 bits (94), Expect = 2e-05
 Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 10/93 (10%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
             P N++   QT   + ++W        N  +          +     +    T T A  
Sbjct: 5   TAPTNLASTAQTTSSITLSWTAS---TDNVGVT------GYDVYNGTALATTVTGTTATI 55

Query: 150 SNLEEGIEYSAEVQAITKAG-PGPWSPKLSLMT 181
           S L     Y+  V+A   AG     S  +S+ T
Sbjct: 56  SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (94), Expect = 3e-05
 Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 6/102 (5%)

Query: 87  PPTGPPANISHHFQ--TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNT-T 143
           PP     + S          + ++W+P        Q      K  +   +  ++      
Sbjct: 3   PPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLE 62

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGP---WSPKLSLMTA 182
             +     L     Y+ +++ I    PG    WSP L L T 
Sbjct: 63  ALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTT 104

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 3e-05
 Identities = 12/84 (14%), Positives = 21/84 (25%), Gaps = 3/84 (3%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
            P  ++      D + I W+ P                 +          +  +  A   
Sbjct: 4   RPKGLAFTDVDVDSIKIAWESP---QGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQ 60

Query: 151 NLEEGIEYSAEVQAITKAGPGPWS 174
            L  G EY+  V A+         
Sbjct: 61  GLRPGSEYTVSVVALHDDMESQPL 84

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 3e-04
 Identities = 10/75 (13%), Positives = 21/75 (28%), Gaps = 1/75 (1%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
          +I++ W  P                  H       + +  +  +  L  G EY   +   
Sbjct: 17 SIKIAWESPQGQVSRYRVTYSSPEDGIHE-LFPAPDGEEDTAELQGLRPGSEYTVSVVAL 75

Query: 69 NHIGYGQETVRYYTT 83
          +     Q  +   +T
Sbjct: 76 HDDMESQPLIGTQST 90

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 40.2 bits (93), Expect = 3e-05
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
           G P  IS    T +   ++W PP R+  +   V Y           NV+  + ++T+   
Sbjct: 2   GSPKGISFSDITENSATVSWTPP-RSRVDSYRVSYVPITG---GTPNVVTVDGSKTRTKL 57

Query: 150 SNLEEGIEYSAEVQAITKAGPGP 172
             L  G++Y+  + ++       
Sbjct: 58  VKLVPGVDYNVNIISVKGFEESE 80

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 35.6 bits (81), Expect = 0.001
 Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 4/76 (5%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKENL-VNSKNMSFLITNLERGVEYEFRIAG 67
          +  + W   T     +  YRV Y          + V+       +  L  GV+Y   I  
Sbjct: 16 SATVSW---TPPRSRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIIS 72

Query: 68 QNHIGYGQETVRYYTT 83
                 +       T
Sbjct: 73 VKGFEESEPISGILKT 88

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 5e-05
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 5/77 (6%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGV--REHTLKENLVNSKNMSFLITNLERGVEYEFRIA 66
          +  + W  P      I GYR+++         +E+ V     S  +TNL  G EY   I 
Sbjct: 16 SFTVHWIAPR---ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIV 72

Query: 67 GQNHIGYGQETVRYYTT 83
            N        +   +T
Sbjct: 73 ALNGREESPLLIGQQST 89

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 5e-05
 Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 7/84 (8%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRNTTQTKAV 148
            P  I     T +   + W  P        I  Y ++ H +  +          ++    
Sbjct: 3   SPTGIDFSDITANSFTVHWIAP-----RATITGYRIRHHPEHFSGRPREDRVPHSRNSIT 57

Query: 149 FSNLEEGIEYSAEVQAITKAGPGP 172
            +NL  G EY   + A+      P
Sbjct: 58  LTNLTPGTEYVVSIVALNGREESP 81

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (92), Expect = 5e-05
 Identities = 19/90 (21%), Positives = 28/90 (31%), Gaps = 5/90 (5%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLR-----THRNGQIVLYNVKFHKKIDANNVIHRNTTQ 144
             P  ++ +  +  V  ++W  P       T       L N           V+  N   
Sbjct: 4   SEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKN 63

Query: 145 TKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
              +  NL E   Y   V+A   AG GP  
Sbjct: 64  RMLLIENLRESQPYRYTVKARNGAGWGPER 93

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (78), Expect = 0.004
 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKE-------NLVNSKNMSFLITNLERGVEY 61
             +L W++P +T GEI  Y V YG+     +         + N KN   LI NL     Y
Sbjct: 18  VTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPY 77

Query: 62  EFRIAGQNHIGYGQETVRYYTTPEGP 87
            + +  +N  G+G E          P
Sbjct: 78  RYTVKARNGAGWGPEREAIINLATQP 103

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (92), Expect = 5e-05
 Identities = 14/92 (15%), Positives = 23/92 (25%), Gaps = 5/92 (5%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTT 143
           G P   P N+S        +   WD             + +K              R+T 
Sbjct: 1   GLPPEKPKNLSCIVNEGKKMRCEWDGG---RETHLETNFTLKSEWATHKFADCKAKRDTP 57

Query: 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
            +  V  +    +     V+A    G      
Sbjct: 58  TSCTVDYSTVYFVNIEVWVEAENALGKVTSDH 89

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 39.7 bits (91), Expect = 5e-05
 Identities = 11/89 (12%), Positives = 22/89 (24%), Gaps = 2/89 (2%)

Query: 88  PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ--IVLYNVKFHKKIDANNVIHRNTTQT 145
           P   P  +     +   V + W        +       Y        +            
Sbjct: 6   PMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHAR 65

Query: 146 KAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
               + LE    Y  ++Q+ + A    +S
Sbjct: 66  SFKIAPLETATMYEFKLQSFSAASASEFS 94

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 5e-05
 Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 3/84 (3%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
            P ++     TP  +   W PP   +         V   +K      I+     +  V S
Sbjct: 2   APTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVS 58

Query: 151 NLEEGIEYSAEVQAITKAGPGPWS 174
            L    +Y   V A+        +
Sbjct: 59  GLMVATKYEVSVYALKDTLTSRPA 82

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (80), Expect = 0.002
 Identities = 11/77 (14%), Positives = 22/77 (28%), Gaps = 1/77 (1%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQ 68
          ++   W+ P                     KE  +   + S +++ L    +YE  +   
Sbjct: 15 SLSAQWTPPNVQLTGYRVRVTPKEKTGPM-KEINLAPDSSSVVVSGLMVATKYEVSVYAL 73

Query: 69 NHIGYGQETVRYYTTPE 85
                +      TT E
Sbjct: 74 KDTLTSRPAQGVVTTLE 90

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 8e-05
 Identities = 13/102 (12%), Positives = 32/102 (31%), Gaps = 6/102 (5%)

Query: 86  GPPTGPPANIS--HHFQTPDVVCITWDPPLRTHRNG--QIVLYNVKFHKKIDANNVIHRN 141
            PP      +           + + W+ P          ++ Y +++ +  +    +   
Sbjct: 2   DPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP 61

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAG--PGPWSPKLSLMT 181
              T     +L+   EY   V++  +     G +S  L +  
Sbjct: 62  ILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTL 103

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 1e-04
 Identities = 10/95 (10%), Positives = 25/95 (26%), Gaps = 2/95 (2%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIV-LYNVKFHKKIDANNVIHRNTTQTKAVF 149
            P N++      + + + W+  +        V + N         +  I+ +        
Sbjct: 3   TPTNVTIESYNMNPI-VYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACINISHHYCNISD 61

Query: 150 SNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD 184
              +        V+A        ++        RD
Sbjct: 62  HVGDPSNSLWVRVKARVGQKESAYAKSEEFAVCRD 96

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 2e-04
 Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 5/101 (4%)

Query: 82  TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN 141
           ++   PP G  A      +TP  V + WDPP    +     +   +   +          
Sbjct: 5   SSGLSPPRGLVAV-----RTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVA 59

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
            T+T+ +   L + + Y   + A   +     S   ++ T+
Sbjct: 60  GTETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTS 100

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 113

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 2e-04
 Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 4/99 (4%)

Query: 76  ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN 135
           ET          P   P+++         + ++W PP   ++N  +  Y + +       
Sbjct: 9   ETFESDLDETRVP-EVPSSLHVR-PLVTSIVVSWTPP--ENQNIVVRGYAIGYGIGSPHA 64

Query: 136 NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
             I  +  Q      NL+    Y   ++A    G G   
Sbjct: 65  QTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPL 103

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 38.1 bits (87), Expect = 2e-04
 Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 17/93 (18%)

Query: 9   TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--------------NSKNMSFLITN 54
           ++ L W  P      I+ ++V+Y +                          K+ +  +T+
Sbjct: 15  SVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTD 74

Query: 55  LERGVEYEFRIAGQNHIGYGQ---ETVRYYTTP 84
           L+    Y FRI         +    + ++Y  P
Sbjct: 75  LKPQHTYRFRILAVYSNNDNKESNTSAKFYLQP 107

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 36.6 bits (83), Expect = 9e-04
 Identities = 11/97 (11%), Positives = 21/97 (21%), Gaps = 12/97 (12%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLY------------NVKFHKKIDANNVI 138
           PP   +    + + V + W  P        I                   +         
Sbjct: 2   PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWN 61

Query: 139 HRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP 175
                   A  ++L+    Y   + A+        S 
Sbjct: 62  SELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESN 98

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 37.7 bits (86), Expect = 3e-04
 Identities = 12/99 (12%), Positives = 20/99 (20%), Gaps = 6/99 (6%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQ-IVLYNVKFHKKIDANNVIHRNTTQ 144
             P              D   I W+             +           +    +    
Sbjct: 7   NAPKLTGITC-----QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNT 61

Query: 145 TKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183
             +    +     Y+  V A  K G  P S      T +
Sbjct: 62  DSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQ 100

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 4e-04
 Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 4/86 (4%)

Query: 87  PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTK 146
            P      I+     P+   I W+ P  +H +  I+    +    +              
Sbjct: 2   GPVEV--FITETPSQPNSHPIQWNAPQPSHISKYIL--RWRPKNSVGRWKEATIPGHLNS 57

Query: 147 AVFSNLEEGIEYSAEVQAITKAGPGP 172
                L+ G+ Y  ++ +I + G   
Sbjct: 58  YTIKGLKPGVVYEGQLISIQQYGHQE 83

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 4e-04
 Identities = 13/92 (14%), Positives = 21/92 (22%), Gaps = 5/92 (5%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
           PP        T   + I+W     T   G  V                           +
Sbjct: 4   PPRRARVTDATETTITISWRTKTETI-TGFQVDAVPANG---QTPIQRTIKPDVRSYTIT 59

Query: 151 NLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA 182
            L+ G +Y   +  +           +   TA
Sbjct: 60  GLQPGTDYKIYLYTLNDNARSSPV-VIDASTA 90

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 7e-04
 Identities = 14/84 (16%), Positives = 23/84 (27%), Gaps = 3/84 (3%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
            P+ I     T     ITW  P     +G  + Y             I     + +    
Sbjct: 4   APSQIEVKDVTDTTALITWFKP-LAEIDGIELTY--GIKDVPGDRTTIDLTEDENQYSIG 60

Query: 151 NLEEGIEYSAEVQAITKAGPGPWS 174
           NL+   EY   + +         +
Sbjct: 61  NLKPDTEYEVSLISRRGDMSSNPA 84

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 7e-04
 Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 91  PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFS 150
            P+N+     TP+ + ++W PP        I         +             T+A  +
Sbjct: 3   APSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVVPRP---RPGVTEATIT 59

Query: 151 NLEEGIEYSAEVQAITKAGPGP 172
            LE G EY+  V A+       
Sbjct: 60  GLEPGTEYTIYVIALKNNQKSE 81

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.001
 Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 5/77 (6%)

Query: 9  TIELVWSQPTQTYGEILGYRVKYGVREHTLKE--NLVNSKNMSFLITNLERGVEYEFRIA 66
          ++ + W  P      I GY +KY       +E             IT LE G EY   + 
Sbjct: 16 SLLVSWQPP---RARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVI 72

Query: 67 GQNHIGYGQETVRYYTT 83
             +    +  +    T
Sbjct: 73 ALKNNQKSEPLIGRKKT 89

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (83), Expect = 8e-04
 Identities = 12/100 (12%), Positives = 22/100 (22%), Gaps = 9/100 (9%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNG----QIVLYNVKFHKKIDANNVIHRN 141
             P+                 + +D P  T        +     V               
Sbjct: 4   SSPSIDQVEP-----YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEA 58

Query: 142 TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT 181
           + +       L+    Y+  + A+   G G  S      T
Sbjct: 59  SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 98

>d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 8e-04
 Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 6/87 (6%)

Query: 91  PPANIS-HHFQTPDVVCITWDPPL--RTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKA 147
           PP N+     +    V ++W+ P    T  +   + + V+   K          T +T  
Sbjct: 4   PPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDKTS- 62

Query: 148 VFSNLEEGIEYSAEVQAITKAGPGPWS 174
             + +      S  V+A  +     WS
Sbjct: 63  --ATVICRKNASISVRAQDRYYSSSWS 87

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 0.001
 Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 6/92 (6%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVK-----FHKKIDANNVIHR 140
           G      + +S    T   + + W+ P     +  +            H +      +  
Sbjct: 2   GSR-PRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMV 60

Query: 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPGP 172
             T+  AV  +L  G  YS  +  +       
Sbjct: 61  PGTRHSAVLRDLRSGTLYSLTLYGLRGPHKAD 92

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (81), Expect = 0.002
 Identities = 8/67 (11%), Positives = 17/67 (25%)

Query: 27 YRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEG 86
          Y ++         +       + + + +L     Y   + G             +TT   
Sbjct: 31 YDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLE 90

Query: 87 PPTGPPA 93
           P    A
Sbjct: 91 APRDLEA 97

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.3 bits (80), Expect = 0.002
 Identities = 13/88 (14%), Positives = 20/88 (22%), Gaps = 3/88 (3%)

Query: 87  PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTK 146
           P    P  I     +  V  + W PP         +L                     ++
Sbjct: 2   PVIDGPTQILVRDVSDTVAFVEWTPPRAKVDF---ILLKYGLVGGEGGKTTFRLQPPLSQ 58

Query: 147 AVFSNLEEGIEYSAEVQAITKAGPGPWS 174
                L  G  Y   + A+        S
Sbjct: 59  YSVQALRPGSRYEVSISAVRGTNESDAS 86

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (78), Expect = 0.004
 Identities = 8/85 (9%), Positives = 21/85 (24%), Gaps = 1/85 (1%)

Query: 90  GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF 149
             P       +  + + +            +  L   +         +    +     + 
Sbjct: 2   SAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-RLPSGSDHVML 60

Query: 150 SNLEEGIEYSAEVQAITKAGPGPWS 174
            +L+   EY   V A  + G    +
Sbjct: 61  KSLDWNAEYEVYVVAENQQGKSKAA 85

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (78), Expect = 0.004
 Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 2/89 (2%)

Query: 86  GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQT 145
           G       ++S    T   + + W P   +   G  +             + +  +++  
Sbjct: 3   GSEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFV--DSSVG 60

Query: 146 KAVFSNLEEGIEYSAEVQAITKAGPGPWS 174
               + LE GI+Y   V  +   G    +
Sbjct: 61  YYTVTGLEPGIDYDISVITLINGGESAPT 89

>d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-10 receptor 1, IL-10R1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 0.004
 Identities = 9/72 (12%), Positives = 23/72 (31%), Gaps = 2/72 (2%)

Query: 105 VCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVF--SNLEEGIEYSAEV 162
             + W P  +   +    +  +++  +   +      T          +L     Y A V
Sbjct: 19  HILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARV 78

Query: 163 QAITKAGPGPWS 174
           +A+  +    W+
Sbjct: 79  RAVDGSRHSQWT 90

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	427
d1wfoa1	117	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.68
d1x5ha1	119	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.63
d1wfna1	106	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.61
d2dtge2	196	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.6
d1x5ga1	103	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.59
d1x5la1	98	Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta	99.58
d1x5za1	102	Receptor-type tyrosine-protein phosphatase delta,	99.57
d1x5ha1	119	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1va9a1	109	Down syndrome cell adhesion molecule-like protein	99.56
d1wfoa1	117	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.56
d2djsa1	95	Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta	99.55
d1x5ga1	103	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.55
d1wj3a_	117	Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI	99.55
d1x5aa1	94	Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta	99.55
d1x3da1	105	Fibronectin type-III domain containing protein 3a,	99.54
d1cfba2	105	Neuroglian, two amino proximal Fn3 repeats {Drosop	99.54
d1x5aa1	94	Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta	99.53
d1x4xa1	93	Fibronectin type-III domain containing protein 3a,	99.52
d1x5fa1	107	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.52
d2cuha1	102	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.52
d1wj3a_	117	Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI	99.52
d1x5za1	102	Receptor-type tyrosine-protein phosphatase delta,	99.51
d2vkwa2	93	Neural cell adhesion molecule 1, NCAM {Human (Homo	99.5
d1qg3a1	92	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	99.5
d1x5ya1	98	Myosin binding protein C, fast-type {Mouse (Mus mu	99.5
d1qg3a1	92	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	99.5
d1wf5a1	108	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1uema_	117	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	99.49
d1x5ya1	98	Myosin binding protein C, fast-type {Mouse (Mus mu	99.49
d2crma1	107	Fibronectin type-III domain containing protein 3a,	99.49
d1cfba1	100	Neuroglian, two amino proximal Fn3 repeats {Drosop	99.49
d1x5ka1	111	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.48
d1x4xa1	93	Fibronectin type-III domain containing protein 3a,	99.48
d2crza1	97	Fibronectin type-III domain containing protein 3a,	99.48
d1x3da1	105	Fibronectin type-III domain containing protein 3a,	99.48
d1x5ka1	111	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.48
d1x5la1	98	Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta	99.48
d1uena_	125	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	99.47
d2crza1	97	Fibronectin type-III domain containing protein 3a,	99.47
d1x5xa1	96	Fibronectin type-III domain containing protein 3a,	99.47
d1x5fa1	107	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.47
d1x4ya1	101	Brother of CDO precursor (BOC) {Mouse (Mus musculu	99.47
d2djsa1	95	Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta	99.46
d1va9a1	109	Down syndrome cell adhesion molecule-like protein	99.46
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	99.46
d1wfta_	123	Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T	99.46
d2ibga1	95	Hedgehog receptor iHog {Fruit fly (Drosophila mela	99.46
d2haza1	101	Neural cell adhesion molecule 1, NCAM {Human (Homo	99.45
d1x4ya1	101	Brother of CDO precursor (BOC) {Mouse (Mus musculu	99.45
d1uema_	117	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	99.45
d1wfua_	120	Fibronectin type 3 and ankyrin repeat domains 1 pr	99.45
d2dtge2	196	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.45
d2dn7a1	94	Receptor-type tyrosine-protein phosphatase F, PTPR	99.45
d1x4za1	108	Brother of CDO precursor (BOC) {Mouse (Mus musculu	99.44
d1wisa1	111	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.44
d2vkwa2	93	Neural cell adhesion molecule 1, NCAM {Human (Homo	99.44
d1x5ia1	113	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.44
d1cfba2	105	Neuroglian, two amino proximal Fn3 repeats {Drosop	99.44
d2crma1	107	Fibronectin type-III domain containing protein 3a,	99.44
d1x4za1	108	Brother of CDO precursor (BOC) {Mouse (Mus musculu	99.44
d1uena_	125	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	99.43
d1v5ja_	108	KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}	99.43
d2ibga1	95	Hedgehog receptor iHog {Fruit fly (Drosophila mela	99.43
d1k85a_	88	Fibronectin type III domain from chitinase A1. {Ba	99.42
d1ueya_	127	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	99.42
d1wfna1	106	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.42
d2cspa1	117	Rim binding protein 2 {Human (Homo sapiens) [TaxId	99.41
d1x5ja1	100	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.41
d1x5xa1	96	Fibronectin type-III domain containing protein 3a,	99.39
d2fnba_	95	Fibronectin, different Fn3 modules {Human (Homo sa	99.39
d2dn7a1	94	Receptor-type tyrosine-protein phosphatase F, PTPR	99.38
d2cuha1	102	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.38
d1x5ja1	100	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.37
d1qr4a1	87	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	99.37
d1tena_	90	Tenascin {Human (Homo sapiens) [TaxId: 9606]}	99.37
d1tdqa2	92	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.37
d1bpva_	104	Type I titin module {Human (Homo sapiens) [TaxId:	99.37
d1ueya_	127	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	99.36
d1fnfa3	89	Fibronectin, different Fn3 modules {Human (Homo sa	99.36
d1cfba1	100	Neuroglian, two amino proximal Fn3 repeats {Drosop	99.35
d2ic2a1	107	Hedgehog receptor iHog {Fruit fly (Drosophila mela	99.35
d1k85a_	88	Fibronectin type III domain from chitinase A1. {Ba	99.35
d1fnha3	89	Fibronectin, different Fn3 modules {Human (Homo sa	99.35
d2cuma1	93	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.34
d2haza1	101	Neural cell adhesion molecule 1, NCAM {Human (Homo	99.34
d1fnha2	90	Fibronectin, different Fn3 modules {Human (Homo sa	99.34
d2ic2a1	107	Hedgehog receptor iHog {Fruit fly (Drosophila mela	99.34
d1j8ka_	94	Fibronectin, different Fn3 modules {Human (Homo sa	99.34
d1tdqa1	93	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.34
d2b5ib2	104	Interleukin-2 receptor beta chain {Human (Homo sap	99.34
d1bpva_	104	Type I titin module {Human (Homo sapiens) [TaxId:	99.33
d2dtge1	102	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.33
d1tdqa3	86	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.33
d1fnha1	90	Fibronectin, different Fn3 modules {Human (Homo sa	99.33
d2d9qb2	105	Granulocyte colony-stimulating factor (GC-SF) rece	99.33
d1fnfa1	94	Fibronectin, different Fn3 modules {Human (Homo sa	99.33
d1wf5a1	108	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.32
d1ujta_	120	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	99.32
d2fnba_	95	Fibronectin, different Fn3 modules {Human (Homo sa	99.31
d1tdqa3	86	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.31
d1qr4a2	88	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	99.31
d1v5ja_	108	KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}	99.31
d1qr4a1	87	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	99.31
d1tdqa2	92	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.31
d1fnfa2	91	Fibronectin, different Fn3 modules {Human (Homo sa	99.31
d1f6fb2	103	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	99.31
d1f6fb2	103	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	99.3
d2cuia1	101	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.3
d1wfua_	120	Fibronectin type 3 and ankyrin repeat domains 1 pr	99.3
d1owwa_	93	Fibronectin, different Fn3 modules {Human (Homo sa	99.29
d3d48r2	104	Prolactin receptor {Human (Homo sapiens) [TaxId: 9	99.29
d1owwa_	93	Fibronectin, different Fn3 modules {Human (Homo sa	99.29
d1wfta_	123	Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T	99.29
d1wisa1	111	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	99.28
d1wk0a_	137	Fibronectin type-III domain containing protein 3a,	99.28
d1fnha2	90	Fibronectin, different Fn3 modules {Human (Homo sa	99.28
d2cuma1	93	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.28
d1fnfa3	89	Fibronectin, different Fn3 modules {Human (Homo sa	99.28
d1fnaa_	91	Fibronectin, different Fn3 modules {Human (Homo sa	99.28
d1qr4a2	88	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	99.28
d1cd9b2	106	Granulocyte colony-stimulating factor (GC-SF) rece	99.28
d1tena_	90	Tenascin {Human (Homo sapiens) [TaxId: 9606]}	99.28
d2b5ic1	95	Cytokine receptor common gamma chain {Human (Homo	99.27
d1bqua2	115	Cytokine receptor gp130 cytokine-binding domains {	99.27
d3d48r2	104	Prolactin receptor {Human (Homo sapiens) [TaxId: 9	99.27
d1n26a3	104	Interleukin-6 receptor alpha chain, domains 2 and	99.26
d2d9qb2	105	Granulocyte colony-stimulating factor (GC-SF) rece	99.26
d1n26a3	104	Interleukin-6 receptor alpha chain, domains 2 and	99.26
d1axib2	106	Growth hormone receptor {Human (Homo sapiens) [Tax	99.25
d1wk0a_	137	Fibronectin type-III domain containing protein 3a,	99.24
d2b5ib2	104	Interleukin-2 receptor beta chain {Human (Homo sap	99.24
d1fnfa2	91	Fibronectin, different Fn3 modules {Human (Homo sa	99.23
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	99.23
d1fnaa_	91	Fibronectin, different Fn3 modules {Human (Homo sa	99.23
d1bqua1	95	Cytokine receptor gp130 cytokine-binding domains {	99.23
d1iarb2	101	Interleukin-4 receptor alpha chain {Human (Homo sa	99.23
d1x5ia1	113	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	99.23
d2cspa1	117	Rim binding protein 2 {Human (Homo sapiens) [TaxId	99.23
d1tdqa1	93	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	99.22
d1fnha3	89	Fibronectin, different Fn3 modules {Human (Homo sa	99.22
d1fnha1	90	Fibronectin, different Fn3 modules {Human (Homo sa	99.22
d2dtge3	125	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.21
d2dtge1	102	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.21
d1bqua2	115	Cytokine receptor gp130 cytokine-binding domains {	99.21
d1axib2	106	Growth hormone receptor {Human (Homo sapiens) [Tax	99.2
d1cd9b2	106	Granulocyte colony-stimulating factor (GC-SF) rece	99.19
d2gysa2	114	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	99.19
d1j8ka_	94	Fibronectin, different Fn3 modules {Human (Homo sa	99.19
d2b5ic1	95	Cytokine receptor common gamma chain {Human (Homo	99.19
d1fnfa1	94	Fibronectin, different Fn3 modules {Human (Homo sa	99.17
d1bqua1	95	Cytokine receptor gp130 cytokine-binding domains {	99.16
d1ujta_	120	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	99.15
d1iarb2	101	Interleukin-4 receptor alpha chain {Human (Homo sa	99.14
d2gysa2	114	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	99.07
d1erna2	105	Erythropoietin (EPO) receptor {Human (Homo sapiens	99.07
d1erna2	105	Erythropoietin (EPO) receptor {Human (Homo sapiens	99.06
d1uc6a_	109	Ciliary neurotrophic factor receptor alpha {Human	99.05
d2dtge3	125	Insulin receptor {Human (Homo sapiens) [TaxId: 960	99.05
d1cd9b1	107	Granulocyte colony-stimulating factor (GC-SF) rece	99.04
d2cuia1	101	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	99.02
d1uc6a_	109	Ciliary neurotrophic factor receptor alpha {Human	98.99
d1cd9b1	107	Granulocyte colony-stimulating factor (GC-SF) rece	98.93
d1fyhb1	98	Interferon-gamma receptor alpha chain {Human (Homo	98.91
d2gysa4	100	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	98.87
d3d85d3	94	The p40 domain of interleukin-12 (IL-12 beta chain	98.83
d2gysa4	100	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	98.78
d3d85d3	94	The p40 domain of interleukin-12 (IL-12 beta chain	98.71
d1fyhb1	98	Interferon-gamma receptor alpha chain {Human (Homo	98.62
d1y6kr1	99	Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa	98.6
d1y6kr1	99	Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa	98.4
d2qfra1	112	Purple acid phosphatase, N-terminal domain {Kidney	97.41
d2qfra1	112	Purple acid phosphatase, N-terminal domain {Kidney	97.21
d1xzwa1	119	Purple acid phosphatase, N-terminal domain {Sweet	97.12
d1xzwa1	119	Purple acid phosphatase, N-terminal domain {Sweet	96.79
d1f6fb1	96	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	96.61
d2hfta1	106	Extracellular region of human tissue factor {Human	96.55
d1a21a1	103	Extracellular region of human tissue factor {Rabbi	96.45
d2c4fu1	116	Extracellular region of human tissue factor {Human	96.15
d2hyma1	109	Interferon-alpha/beta receptor beta chain {Human (	96.07
d1f6fb1	96	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	96.02
d2hyma1	109	Interferon-alpha/beta receptor beta chain {Human (	95.67
d2c4fu1	116	Extracellular region of human tissue factor {Human	95.36
d2hfta1	106	Extracellular region of human tissue factor {Human	94.15
d1a21a1	103	Extracellular region of human tissue factor {Rabbi	93.96
d2gysa3	99	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	83.96
d1edqa1	109	Chitinase A, N-terminal domain N {Serratia marcesc	82.6
d1axib1	99	Growth hormone receptor {Human (Homo sapiens) [Tax	82.21

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=8.7e-17  Score=122.88  Aligned_cols=112  Identities=24%  Similarity=0.335  Sum_probs=91.7

Q ss_pred             CCCCCC-CCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccccccccccccccccccc
Q psy8774         168 AGPGPW-SPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSN  246 (427)
Q Consensus       168 ~g~~~~-s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~  246 (427)
                      .|.|.+ +..+.++|..++|.+|.++.+...+.+++.|+|++|...+|.+.+|.|+|+..........            
T Consensus         2 ~G~G~pss~~v~~~T~~~~P~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~------------   69 (117)
T d1wfoa1           2 IGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTAT------------   69 (117)
T ss_dssp             CCCCCCCCCCSCCCCSCCCCCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCC------------
T ss_pred             ccCCCCCCCCEEEECCCCCCcCCCCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEe------------
Confidence            467755 4567888888889999999999999999999999998788899999999987643221111            


Q ss_pred             ceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         247 IARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                                       ........++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|
T Consensus        70 -----------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT  114 (117)
T d1wfoa1          70 -----------------VEVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT  114 (117)
T ss_dssp             -----------------EEEECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECC
T ss_pred             -----------------EEecCCceEEEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEEC
Confidence                             223345677899999999999999999999999999998877776

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.7e-16  Score=119.67  Aligned_cols=108  Identities=29%  Similarity=0.463  Sum_probs=89.0

Q ss_pred             eEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--EeeeeeEEEEccCCCCc
Q psy8774          79 RYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTTQTKAVFSNLEEGI  156 (427)
Q Consensus        79 ~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t  156 (427)
                      +.++|.+++|..+|.++.+...+.+++.|+|++|.....+|.+.+|.|+|+..+.......  ......++.|.+|.|++
T Consensus         2 v~v~T~~~~P~~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t   81 (119)
T d1x5ha1           2 VAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQLSQLIEGLDRGT   81 (119)
T ss_dssp             CCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCCEEEEECCCSSC
T ss_pred             EEEEcCCCCCCCCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccccceeeeecCCCccEEEeCCCCCCC
Confidence            3567888889889999999999999999999998767778899999999988732221111  12447899999999999


Q ss_pred             EEEEEEEEeeCCCCCCCCCCeEEEcccccC
Q psy8774         157 EYSAEVQAITKAGPGPWSPKLSLMTARDMV  186 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p  186 (427)
                      .|.|+|+|+|..|.|++|..+.++|....+
T Consensus        82 ~Y~~~V~A~n~~G~G~~S~~~~~~T~~~~~  111 (119)
T d1x5ha1          82 EYNFRVAALTINGTGPATDWLSAETFESDL  111 (119)
T ss_dssp             EEEEECEEEETTEEEEECCCEEEECCSSCC
T ss_pred             EEEEEEEEEcCCcCCCCCCCEEEEeCCCCC
Confidence            999999999999999999999999955443

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=8.7e-16  Score=114.95  Aligned_cols=99  Identities=22%  Similarity=0.257  Sum_probs=81.0

Q ss_pred             eEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecc
Q psy8774         177 LSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTA  256 (427)
Q Consensus       177 ~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (427)
                      +.++|.++.|.+|.++++...+.+++.|+|++|...+|.+.+|+|+|+..+......                       
T Consensus         2 v~v~T~e~vP~~p~~l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~-----------------------   58 (106)
T d1wfna1           2 QLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRV-----------------------   58 (106)
T ss_dssp             CSCCSSCCSCCCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCC-----------------------
T ss_pred             EEEEcCCCCCcCCCCcEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceE-----------------------
Confidence            346777888999999999999999999999999888899999999998764322111                       


Q ss_pred             ccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceE
Q psy8774         257 VEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT  305 (427)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~  305 (427)
                             .........++.|.+|.|++.|.|+|+|+|..|.|+.|....
T Consensus        59 -------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~  100 (106)
T d1wfna1          59 -------THYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI  100 (106)
T ss_dssp             -------CEEECSSCCEEEEESCCTTCEEEEEEEEECSSCEEEEEEEEE
T ss_pred             -------EEecCCCeeEEEEccCCCCCEEEEEEEEECCCCCcCCcCCEE
Confidence                   223345567899999999999999999999999999887543

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=9.2e-16  Score=128.01  Aligned_cols=184  Identities=13%  Similarity=0.090  Sum_probs=79.4

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      |.+|.++.+...++++|.|+|++|.  +.+|.+.+|.|+|+.........    .........|.+.+.|.++|.+.+..
T Consensus         3 Ps~P~~~~~~~~s~~si~vsW~pP~--~~ng~i~~Y~V~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~~v~~~~~~   76 (196)
T d2dtge2           3 PSVPLDPISVSNSSSQIILKWKPPS--DPNGNITHYLVFWERQAEDSELF----ELDYCLKGLKLPSRTWSPPFESEDSQ   76 (196)
T ss_dssp             CCCCEEEEEEECSSSCEEEEEECCC--CSSSSCSEEECCEEEECCCCSCT----TCSSSCSCCCCCC-------------
T ss_pred             CcCCcCCEEEeccCCEEEEEEECCC--CCCCcEEEEEEEEEcCCCCCcee----EEeeEEeccccceeEEEEEEEEEcCC
Confidence            3579999999999999999999984  66789999999998763222111    11112233567889999999999887


Q ss_pred             CCCCCCCCeEEEccc-------ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccc
Q psy8774         169 GPGPWSPKLSLMTAR-------DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPL  241 (427)
Q Consensus       169 g~~~~s~~~~~~t~~-------~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~  241 (427)
                      +.+..+.........       .++..+..+.+.......+.+.|..+.   +....|.+++...........       
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-------  146 (196)
T d2dtge2          77 KHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPR---PSRKRRSLGDVGNAGNNEEHR-------  146 (196)
T ss_dssp             ----------------------------------------------------------------------CCS-------
T ss_pred             ccccCcCCccceecCCCCccccccccCCcCcEEEeccCCceeecccCcC---CCccceEEEEEEeecCCCccE-------
Confidence            766444333333211       122334444555555566677776665   223333333322211111111       


Q ss_pred             cccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCC---ccceEEeecC
Q psy8774         242 TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRL---SGKVTVKVKP  310 (427)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~---s~~~~~~t~~  310 (427)
                                            ........++++|.+|.|++.|.|+|+|+|..|.|..   +..+.++|.|
T Consensus       147 ----------------------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P  196 (196)
T d2dtge2         147 ----------------------PFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP  196 (196)
T ss_dssp             ----------------------CSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred             ----------------------EEEeccceEEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence                                  2234456778999999999999999999999987764   3455566643

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.8e-15  Score=110.74  Aligned_cols=94  Identities=27%  Similarity=0.418  Sum_probs=79.4

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      ..+|.+|.++++...+.++|.|+|++|...+|.+.+|.|+|+..+.   ..+                            
T Consensus         8 ~~vP~~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~---~~~----------------------------   56 (103)
T d1x5ga1           8 VQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGT---DKE----------------------------   56 (103)
T ss_dssp             SSCCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTC---CCC----------------------------
T ss_pred             CCCcccCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCC---cee----------------------------
Confidence            3567899999999999999999999998778899999999987632   122                            


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                        .......++++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.
T Consensus        57 --~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~  101 (103)
T d1x5ga1          57 --QDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL  101 (103)
T ss_dssp             --CCEEECSSEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred             --EEEeccccEEecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence              112345678999999999999999999999999999998988884

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=3.2e-15  Score=109.89  Aligned_cols=95  Identities=25%  Similarity=0.316  Sum_probs=80.0

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ++|.+|.++++...+.+++.|+|++|...+|.+.+|+|+|+..+.....                               
T Consensus         2 a~P~~p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~-------------------------------   50 (98)
T d1x5la1           2 AAPSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS-------------------------------   50 (98)
T ss_dssp             CCCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS-------------------------------
T ss_pred             cCCCCCCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeeccccccee-------------------------------
Confidence            4678999999999999999999999987788999999999876322111                               


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                      ........++++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.
T Consensus        51 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~   96 (98)
T d1x5la1          51 YSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG   96 (98)
T ss_dssp             CEEEEESSSEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred             eEEecCCceEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence            1123456679999999999999999999999999999999999884

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.3e-15  Score=111.69  Aligned_cols=99  Identities=23%  Similarity=0.374  Sum_probs=81.6

Q ss_pred             eEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecc
Q psy8774         177 LSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTA  256 (427)
Q Consensus       177 ~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (427)
                      +.+.|..+.|.+|.++++...+.+++.|+|++|.  ++.+.+|.|+|+....   ..+                      
T Consensus         2 v~v~T~~~vP~~P~~~~~~~~~~~si~l~W~~p~--~~~i~~Y~i~y~~~~~---~~~----------------------   54 (102)
T d1x5za1           2 IQVITQTGVPGQPLNFKAEPESETSILLSWTPPR--SDTIANYELVYKDGEH---GEE----------------------   54 (102)
T ss_dssp             CCCCCCSCCCCCCEEEEEECSSSSEEEEEEECCS--CCCCCEEEECBEESSS---CCC----------------------
T ss_pred             eEEECCCCCCcCCCCeEEEEccCCEEEEEEECCC--CCCccceEEEEEeCCC---Cce----------------------
Confidence            3456677888999999999999999999999886  4678999999987632   121                      


Q ss_pred             ccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         257 VEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                             ........++++|.+|+|++.|.|+|+|+|..|.|++|..+.++|.
T Consensus        55 -------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~  100 (102)
T d1x5za1          55 -------QRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTM  100 (102)
T ss_dssp             -------BCCEECSSSEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECC
T ss_pred             -------EEEEcCCcCEEEECCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcC
Confidence                   2223345678999999999999999999999999999999999884

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.2e-15  Score=114.35  Aligned_cols=106  Identities=25%  Similarity=0.352  Sum_probs=83.6

Q ss_pred             eEEEcccccC-CCCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEecccccccccccccccccccccceeEEee
Q psy8774         177 LSLMTARDMV-RAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYT  253 (427)
Q Consensus       177 ~~~~t~~~~p-~~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (427)
                      +.++|.++.| .+|.++++...+.+++.|+|++|..  .+|.+.+|+|+|+..+......                    
T Consensus         2 v~v~T~~~~P~~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~~~~~--------------------   61 (119)
T d1x5ha1           2 VAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVT--------------------   61 (119)
T ss_dssp             CCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEE--------------------
T ss_pred             EEEEcCCCCCCCCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeeccccccee--------------------
Confidence            3456666666 5799999999999999999998853  4678999999998763221111                    


Q ss_pred             eccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCC
Q psy8774         254 MTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED  312 (427)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~  312 (427)
                                .........++.|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+..
T Consensus        62 ----------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~~  110 (119)
T d1x5ha1          62 ----------ETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESD  110 (119)
T ss_dssp             ----------CCBCCTTCCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSC
T ss_pred             ----------eeecCCCccEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCCC
Confidence                      1223456778999999999999999999999999999999999985443

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.3e-14  Score=109.08  Aligned_cols=101  Identities=27%  Similarity=0.459  Sum_probs=85.0

Q ss_pred             eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE------EeeeeeEEEEccCCCC
Q psy8774          82 TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH------RNTTQTKAVFSNLEEG  155 (427)
Q Consensus        82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~------~~~~~~~~~i~~L~p~  155 (427)
                      .|.+++|.+||.++++...+.+++.|+|++|.....++.+.+|.|.|+..........      ......++.|.+|.|+
T Consensus         2 ~T~~~~P~~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~   81 (109)
T d1va9a1           2 STEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKF   81 (109)
T ss_dssp             CSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSS
T ss_pred             CCcCCCCCCCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeeeEEecCCCeeEEEECCCCcc
Confidence            5778889999999999999999999999998767777899999999987743332211      1244789999999999


Q ss_pred             cEEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         156 IEYSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       156 t~Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      +.|.|+|+|.|..|.|++|..+.++|.
T Consensus        82 t~Y~~~V~a~n~~G~g~~S~~v~~~T~  108 (109)
T d1va9a1          82 AQYGVVVQAFNRAGTGPSSSEINATTL  108 (109)
T ss_dssp             CCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred             eEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence            999999999999999999999988774

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=7.4e-15  Score=111.90  Aligned_cols=109  Identities=24%  Similarity=0.341  Sum_probs=86.9

Q ss_pred             cCcCccc--ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE---Eeeeee
Q psy8774          71 IGYGQET--VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH---RNTTQT  145 (427)
Q Consensus        71 ~g~~~~~--~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~---~~~~~~  145 (427)
                      .|.|.++  .+.+.|.+++| .+|.++.+...+.++|.|+|.+|.  ..+|.+.+|.|+|+..........   .....+
T Consensus         2 ~G~G~pss~~v~~~T~~~~P-~~P~~~~~~~~~~~sv~v~W~~P~--~~~g~i~~Y~i~y~~~~~~~~~~~~~~~~~~~~   78 (117)
T d1wfoa1           2 IGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQPPA--APNGIILAYQITHRLNTTTANTATVEVLAPSAR   78 (117)
T ss_dssp             CCCCCCCCCCSCCCCSCCCC-CCCCCCEEEEECSSEEEEECCCCS--CCCSCCCEEEEEEEESSCCCSCCCEEEECTTCC
T ss_pred             ccCCCCCCCCEEEECCCCCC-cCCCCcEEEEecCCEEEEEEECCC--CCCCceEEEeeeeeeccCCCceEeEEecCCceE
Confidence            4666544  35677777777 579999999999999999999884  557889999999987754443322   234578


Q ss_pred             EEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         146 KAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       146 ~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      ++.|.+|.|++.|.|+|+|.|..|.|.+|..+.++|.
T Consensus        79 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT~  115 (117)
T d1wfoa1          79 QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE  115 (117)
T ss_dssp             EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCS
T ss_pred             EEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEECC
Confidence            9999999999999999999999999988887777764

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.5e-14  Score=105.79  Aligned_cols=94  Identities=26%  Similarity=0.372  Sum_probs=78.0

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      |+.|..+.+...+.++|.|+|++|...+|.+.+|.|+++........                               ..
T Consensus         1 P~~~~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-------------------------------~~   49 (95)
T d2djsa1           1 PSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFN-------------------------------SS   49 (95)
T ss_dssp             CCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTT-------------------------------CE
T ss_pred             CCCCCccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccCcce-------------------------------eE
Confidence            45677899999999999999999988889999999999876322111                               11


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                      ......+.++|.+|.|++.|.|+|+|+|..|.|.+|..+.++|.+
T Consensus        50 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~   94 (95)
T d2djsa1          50 MARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT   94 (95)
T ss_dssp             EEEESSSEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred             eecCCccEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence            233456789999999999999999999999999999999999865

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.5e-14  Score=106.20  Aligned_cols=92  Identities=26%  Similarity=0.472  Sum_probs=78.3

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      |++|.++++...+.++|.|+|++|  ...++.+.+|.|+|+..+. ..+.......+++.|.+|.|++.|.|+|+|.|..
T Consensus        11 P~~P~~l~v~~~s~~si~l~W~~P--~~~~g~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   87 (103)
T d1x5ga1          11 PGPAPNLRAYAASPTSITVTWETP--VSGNGEIQNYKLYYMEKGT-DKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKH   87 (103)
T ss_dssp             CCCCSSCEEEEEETTEEEEECCCC--SCCSSCCSEEEEEEEETTC-CCCCCEEECSSEEEECSCCTTCEEEEEEEEECSS
T ss_pred             cccCCCcEEEEccCCEEEEEEECC--cCCCccEEEEEEEEEeCCC-ceeEEEeccccEEecCCCCCCCEEEEEEEEEcCC
Confidence            367889999999999999999988  4667899999999998743 3333445667899999999999999999999999


Q ss_pred             CCCCCCCCeEEEccc
Q psy8774         169 GPGPWSPKLSLMTAR  183 (427)
Q Consensus       169 g~~~~s~~~~~~t~~  183 (427)
                      |.|.+|..+.++|.+
T Consensus        88 G~g~~S~~v~v~T~e  102 (103)
T d1x5ga1          88 GPGVSTPDVAVRTLS  102 (103)
T ss_dssp             CCCCBCCCCCEECCC
T ss_pred             cCcCCCCCEEEEcCC
Confidence            999999999888854

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.1e-14  Score=110.84  Aligned_cols=112  Identities=21%  Similarity=0.331  Sum_probs=86.3

Q ss_pred             CCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEeccccccccccccccccccccc
Q psy8774         169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSN  246 (427)
Q Consensus       169 g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~  246 (427)
                      |.|+.|..+.++|..++|..|..+.+...+.+++.|+|+++..  .+|.+.+|+|+|+..+.   ..+            
T Consensus         1 G~s~~S~~v~v~T~~~~P~~pp~~~~~~~~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~---~~~------------   65 (117)
T d1wj3a_           1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQ---NNV------------   65 (117)
T ss_dssp             CCCCCCCCCCCCCSCCCCCCCCCSCBCCEETTEEEEECCCCCCCSSSCCEEEEEEEEEESSC---SSC------------
T ss_pred             CcCCCCCCEEEEcCCCCcCCCCcceEEeecCCEEEEEEeecccccCCCceeEEEEEEEecCC---Cce------------
Confidence            5678899999999888886555555666789999999998543  46799999999987632   111            


Q ss_pred             ceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         247 IARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                                         ........+.+.+|.+++.|.|+|+|+|..|.|++|..+.+.+....+|
T Consensus        66 -------------------~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~~~~~~P  114 (117)
T d1wj3a_          66 -------------------QVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGP  114 (117)
T ss_dssp             -------------------EEEEESSSEEEEECCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCCCS
T ss_pred             -------------------eeeeceeeEEEeeccCCcEEEEEEEEEcCCccCCCCCCEEEeccCCCCC
Confidence                               1122344677889999999999999999999999999888866555555

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.55  E-value=1.8e-14  Score=104.71  Aligned_cols=91  Identities=24%  Similarity=0.332  Sum_probs=75.7

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCC-CCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPA-GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~-~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      +|.+|.+|++...+.++|.|+|.+|.. .++.+.+|.|.+...+.    .+                             
T Consensus         2 ~p~~p~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~----~~-----------------------------   48 (94)
T d1x5aa1           2 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE----EW-----------------------------   48 (94)
T ss_dssp             CCCCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC----EE-----------------------------
T ss_pred             cCCCCCceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCc----eE-----------------------------
Confidence            578999999999999999999998864 34667789999987621    11                             


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                        ......++++|.+|.|++.|.|+|+|.|..|.|++|..+.++|.|
T Consensus        49 --~~~~~~t~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~P   93 (94)
T d1x5aa1          49 --HQMVLEPRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSP   93 (94)
T ss_dssp             --EEEESSSEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred             --EEeeccCEEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence              112245789999999999999999999999999999999999964

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.1e-14  Score=108.54  Aligned_cols=100  Identities=16%  Similarity=0.155  Sum_probs=83.4

Q ss_pred             EEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccc
Q psy8774         179 LMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVE  258 (427)
Q Consensus       179 ~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (427)
                      |+|...+|.+|.++++...+.+++.|+|.+|...++.+.+|.|+++......  .+                        
T Consensus         4 f~T~~~~P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~--~~------------------------   57 (105)
T d1x3da1           4 FTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNG--EF------------------------   57 (105)
T ss_dssp             CCCCCSCCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSS--CC------------------------
T ss_pred             EECCCCCCcCCCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCcc--ee------------------------
Confidence            5677788899999999999999999999999877789999999987652211  11                        


Q ss_pred             ccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         259 DLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       259 ~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                           ........+++.+.+|.|++.|.|+|+|.|..|.|++|..+.+.|.
T Consensus        58 -----~~~~~~~~~~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~  103 (105)
T d1x3da1          58 -----CQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS  103 (105)
T ss_dssp             -----EEEEEESCSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred             -----EEEecCCccEEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence                 2233456678999999999999999999999999999999998873

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=99.54  E-value=3.2e-14  Score=105.95  Aligned_cols=98  Identities=20%  Similarity=0.283  Sum_probs=80.6

Q ss_pred             CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEEE
Q psy8774          86 GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        86 ~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      ++|..+|.++++...+.++|.|+|+++...+.+|.+.+|.|.|+..+....+....   ...+++.|.+|.+++.|.|+|
T Consensus         2 ~~P~~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   81 (105)
T d1cfba2           2 DVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKV   81 (105)
T ss_dssp             CCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEE
T ss_pred             CCCCCCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEEEecCCCccEEEECCCCCCCEEEEEE
Confidence            56778899999999999999999998776778889999999999875454443333   347899999999999999999


Q ss_pred             EEeeCCCCCCCCCCe-EEEccc
Q psy8774         163 QAITKAGPGPWSPKL-SLMTAR  183 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~-~~~t~~  183 (427)
                      +|.|..|.|+.|... ...+.+
T Consensus        82 ~A~N~~G~gp~S~~~v~~~t~E  103 (105)
T d1cfba2          82 VAINDRGESNVAAEEVVGYSGE  103 (105)
T ss_dssp             EEEETTEECSSCCCCEEEESSS
T ss_pred             EEEeCCcCCCCCCCcEeEcCCC
Confidence            999999999887654 445544

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=6.1e-14  Score=101.82  Aligned_cols=91  Identities=19%  Similarity=0.375  Sum_probs=76.6

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      |+.+|.+|++...+.++|.|+|.++.. +.++.+.+|.|.+...  +. ........+++.|.+|.|++.|.|+|+|.|.
T Consensus         2 ~p~~p~~L~~~~~~~~si~vsW~~p~~-~~~~~~i~Y~i~~~~~--~~-~~~~~~~~t~~~i~~L~p~t~Y~~rV~A~n~   77 (94)
T d1x5aa1           2 ESLSGLSLKLVKKEPRQLELTWAGSRP-RNPGGNLSYELHVLNQ--DE-EWHQMVLEPRVLLTKLQPDTTYIVRVRTLTP   77 (94)
T ss_dssp             CCCCSCCCCEEEEETTEEEEECCCCCS-SCCSSCCEEEEEEECS--SC-EEEEEESSSEEEEESCCSSCEEEEEEEEECS
T ss_pred             cCCCCCceEEEEcCCCEEEEEEecccC-CCCCcEEEEEEEEecC--Cc-eEEEeeccCEEEECCCCCCCEEEEEEEEEcC
Confidence            566788999999999999999999864 3455667999999876  22 3333456789999999999999999999999


Q ss_pred             CCCCCCCCCeEEEcc
Q psy8774         168 AGPGPWSPKLSLMTA  182 (427)
Q Consensus       168 ~g~~~~s~~~~~~t~  182 (427)
                      .|.|++|..+.++|.
T Consensus        78 ~G~g~~S~~~~~~T~   92 (94)
T d1x5aa1          78 LGPGPFSPDHEFRTS   92 (94)
T ss_dssp             SSCCCCCCCEEEECC
T ss_pred             CcCcCCCCCEEEEeC
Confidence            999999999999984

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.7e-14  Score=103.83  Aligned_cols=92  Identities=18%  Similarity=0.133  Sum_probs=76.5

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      |.+|.++++...+.+++.|+|++|...++.+.+|.|+|+....   ..                              ..
T Consensus         1 P~~P~~~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~---~~------------------------------~~   47 (93)
T d1x4xa1           1 PDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEG---SM------------------------------QI   47 (93)
T ss_dssp             CCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTT---SC------------------------------CE
T ss_pred             CcCCCCCEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCC---cc------------------------------eE
Confidence            4677788888889999999999998777899999999986522   11                              22


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                      ......++++|.+|.+++.|.|+|+|.|..|.|++|..+.++|.|
T Consensus        48 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpp   92 (93)
T d1x4xa1          48 CYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPP   92 (93)
T ss_dssp             EEEESCSEEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCC
T ss_pred             eecCCccEEEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCC
Confidence            334567789999999999999999999999999999999988843

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4e-14  Score=105.78  Aligned_cols=99  Identities=24%  Similarity=0.357  Sum_probs=80.8

Q ss_pred             ccccCCCCCceEEEeeeCcEEEEEeeeCCC-CCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         182 ARDMVRAPLGVKALATSDQSVEVWWKPVPA-GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       182 ~~~~p~~p~~l~~~~~~~~si~v~W~~p~~-~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      ...+|.+|.++.+...+.+++.|+|.+|.. .++.+.+|.|+|+..+.... ..                          
T Consensus         7 ~~~~P~~P~~l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~-~~--------------------------   59 (107)
T d1x5fa1           7 TGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARE-RV--------------------------   59 (107)
T ss_dssp             CCCCCCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCC-EE--------------------------
T ss_pred             CCCCCcCCCccEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCce-EE--------------------------
Confidence            456788999999999999999999998854 35789999999987632211 11                          


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                         ........++++|.+|.|++.|.|+|+|.|..|.|.+|..+.++|.|
T Consensus        60 ---~~~~~~~~~~~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~  106 (107)
T d1x5fa1          60 ---ENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP  106 (107)
T ss_dssp             ---EECSSTTCSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred             ---EEEeCCCccEEEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence               22344567899999999999999999999999999999999999854

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.3e-14  Score=107.50  Aligned_cols=101  Identities=20%  Similarity=0.257  Sum_probs=80.8

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      |.+|.+|++..++.+++.|+|++|.   +.+.+|+|.|+..+.   ..+                             ..
T Consensus         1 P~~P~~l~~~~~t~~si~l~W~~p~---~~i~~Y~v~~~~~~~---~~~-----------------------------~~   45 (102)
T d2cuha1           1 PDGPTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGA---PPL-----------------------------QA   45 (102)
T ss_dssp             CSSCEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSS---CCE-----------------------------EE
T ss_pred             CcCCCccEEEEeCCCEEEEEEEeee---ccceeeEEEEEeccc---cce-----------------------------ee
Confidence            5789999999999999999999886   678999999986522   122                             22


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCcceEEeecC
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVS  323 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~~l~~~~~~  323 (427)
                      ......++++|.+|.|++.|.|+|+|++..|.|..+. +.++| +..+|.+|++..++
T Consensus        46 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~~~s~~~~-~~~~T-~~~~P~~l~~~~vt  101 (102)
T d2cuha1          46 ETPGSAVDYPLHDLVLHTNYTATVRGLRGPNLTSPAS-ITFTT-GLEAPRDLEAKEVT  101 (102)
T ss_dssp             EEETTCSEEEECSCCSSSEEEEEEEEEETTEECCCEE-EEEES-CCCCTTTSSSCCCC
T ss_pred             eeeeeeeeEEEccEEeeEEEEEEEEEEeCCCCcCCEE-EEEEC-CCCCCCCCEeecCC
Confidence            3456678999999999999999999999988887665 56666 55688888776543

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=6e-14  Score=106.69  Aligned_cols=106  Identities=22%  Similarity=0.295  Sum_probs=82.6

Q ss_pred             cCcc-cceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEcc
Q psy8774          73 YGQE-TVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSN  151 (427)
Q Consensus        73 ~~~~-~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~  151 (427)
                      .|.. ..+.+.|.+.+|..+|..+ +...+.+.|.|+|+++.....++.+.+|.|+|+..+  ............+.+.+
T Consensus         2 ~s~~S~~v~v~T~~~~P~~pp~~~-~~~~~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~--~~~~~~~~~~~~~~~~~   78 (117)
T d1wj3a_           2 SSGSSGTVNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSS--QNNVQVLNTNKTSAELV   78 (117)
T ss_dssp             CCCCCCCCCCCCSCCCCCCCCCSC-BCCEETTEEEEECCCCCCCSSSCCEEEEEEEEEESS--CSSCEEEEESSSEEEEE
T ss_pred             cCCCCCCEEEEcCCCCcCCCCcce-EEeecCCEEEEEEeecccccCCCceeEEEEEEEecC--CCceeeeeceeeEEEee
Confidence            3443 3566778888887777665 455678899999998776778889999999998873  33333444455677889


Q ss_pred             CCCCcEEEEEEEEeeCCCCCCCCCCeEEEc
Q psy8774         152 LEEGIEYSAEVQAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       152 L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t  181 (427)
                      |.+++.|.|+|+|.|..|.|++|+.+.+.+
T Consensus        79 L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~  108 (117)
T d1wj3a_          79 LPIKEDYIIEVKATTDGGDGTSSEQIRIPR  108 (117)
T ss_dssp             CCCSSCEEEEEEEEESSCCCCBCCCEEECC
T ss_pred             ccCCcEEEEEEEEEcCCccCCCCCCEEEec
Confidence            999999999999999999999998887744

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=3.2e-14  Score=105.42  Aligned_cols=99  Identities=19%  Similarity=0.303  Sum_probs=81.7

Q ss_pred             EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEE
Q psy8774          80 YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYS  159 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~  159 (427)
                      .+.|..++| .+|.++++...+.++|.|+|++|.    ++.+.+|.|+|+....+..........+++.|.+|.|++.|.
T Consensus         3 ~v~T~~~vP-~~P~~~~~~~~~~~si~l~W~~p~----~~~i~~Y~i~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~   77 (102)
T d1x5za1           3 QVITQTGVP-GQPLNFKAEPESETSILLSWTPPR----SDTIANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYY   77 (102)
T ss_dssp             CCCCCSCCC-CCCEEEEEECSSSSEEEEEEECCS----CCCCCEEEECBEESSSCCCBCCEECSSSEEEEECCCTTCEEE
T ss_pred             EEECCCCCC-cCCCCeEEEEccCCEEEEEEECCC----CCCccceEEEEEeCCCCceEEEEcCCcCEEEECCCCCCCEEE
Confidence            456667777 578999999999999999999884    357889999999875444333444557889999999999999


Q ss_pred             EEEEEeeCCCCCCCCCCeEEEccc
Q psy8774         160 AEVQAITKAGPGPWSPKLSLMTAR  183 (427)
Q Consensus       160 ~~V~a~~~~g~~~~s~~~~~~t~~  183 (427)
                      |+|+|.|..|.|++|..+.++|.+
T Consensus        78 ~~V~A~n~~G~g~~S~~v~~~T~e  101 (102)
T d1x5za1          78 FRLAARSPQGLGASTAEISARTMQ  101 (102)
T ss_dssp             ECEEEECSSCEEEECCCEEEECCC
T ss_pred             EEEEEEcCCCEeCCCCCEEEEcCC
Confidence            999999999999999999998843

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4.9e-14  Score=102.40  Aligned_cols=91  Identities=20%  Similarity=0.171  Sum_probs=75.0

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      |.+|.++.+...+.+++.|+|++|...++.|.+|.|+|+..+.....                               ..
T Consensus         1 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~-------------------------------~~   49 (93)
T d2vkwa2           1 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKP-------------------------------EI   49 (93)
T ss_dssp             CCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCC-------------------------------CE
T ss_pred             CCCCccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceee-------------------------------ee
Confidence            67899999999999999999999987667899999999886322110                               12


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      ......++++|.+|.|++.|.|+|+|.|..|.|..+. +.++|
T Consensus        50 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~N~~G~s~ps~-~~~~T   91 (93)
T d2vkwa2          50 RLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAH-FVFRT   91 (93)
T ss_dssp             EECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC
T ss_pred             eccCCceEEEEeccccceEEEEEEEEEcCCCCcCCEe-EEEEe
Confidence            2345667899999999999999999999999999986 66776

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=6.1e-14  Score=101.72  Aligned_cols=89  Identities=26%  Similarity=0.414  Sum_probs=74.9

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.++++...+.++|.|+|++|.   +.+.+|.|+|+........                               ...
T Consensus         3 ~aP~n~~~~~~s~~si~l~W~~p~---~~~~~Y~i~y~~~~~~~~~-------------------------------~~~   48 (92)
T d1qg3a1           3 GAPQNPNAKAAGSRKIHFNWLPPS---GKPMGYRVKYWIQGDSESE-------------------------------AHL   48 (92)
T ss_dssp             CCCEEEEEEECSTTCEEEEEECCS---SCCCEEEEEEEETTSCGGG-------------------------------CEE
T ss_pred             CcCCCCEEEEccCCEEEEEEEecC---CCccceEEeeeeccccccE-------------------------------EEE
Confidence            689999999999999999999886   7789999999877332211                               223


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                      .......+.|.+|.|++.|.|+|+|+|..|.|++|..+.++|.
T Consensus        49 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~   91 (92)
T d1qg3a1          49 LDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH   91 (92)
T ss_dssp             EEESSSEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred             ecCCccEEEECCCCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence            3456678999999999999999999999999999999999883

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=6.4e-14  Score=102.72  Aligned_cols=89  Identities=17%  Similarity=0.243  Sum_probs=71.1

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ||.+|.++.+...+.+++.|+|.+|...++ .+.+|.|+|+..+.   ..|..                           
T Consensus         1 PP~~P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~---~~~~~---------------------------   50 (98)
T d1x5ya1           1 PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGS---EEWVP---------------------------   50 (98)
T ss_dssp             CCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTC---CCCEE---------------------------
T ss_pred             CCCCCcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCc---ceeEE---------------------------
Confidence            578999999999999999999998876544 69999999988732   23310                           


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK  303 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~  303 (427)
                      ........+++++.+|.+++.|.|+|+|.|..|.|++|..
T Consensus        51 ~~~~~~~~~~~~v~~L~~~~~Y~frV~A~n~~G~s~~s~~   90 (98)
T d1x5ya1          51 ANKEPVERCGFTVKDLPTGARILFRVVGVNIAGRSEPATL   90 (98)
T ss_dssp             SSSSCBSSSEEEEECCCTTCCEEEEEEEEETTEECCCCCC
T ss_pred             eeeecCceeEEEECCCcCCeEEEEEEEEECCCcCCCCcCC
Confidence            1122345678999999999999999999999999887753

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.7e-13  Score=99.27  Aligned_cols=88  Identities=25%  Similarity=0.368  Sum_probs=75.5

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-EEEeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-IHRNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      ++|.++.+...++++|.|+|++|.     +.+.+|.|+|+........ .......+.+.|.+|.|++.|.|+|+|.|..
T Consensus         3 ~aP~n~~~~~~s~~si~l~W~~p~-----~~~~~Y~i~y~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   77 (92)
T d1qg3a1           3 GAPQNPNAKAAGSRKIHFNWLPPS-----GKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQ   77 (92)
T ss_dssp             CCCEEEEEEECSTTCEEEEEECCS-----SCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEECSS
T ss_pred             CcCCCCEEEEccCCEEEEEEEecC-----CCccceEEeeeeccccccEEEEecCCccEEEECCCCCCcEEEEEEEEEeCC
Confidence            579999999999999999999983     5688999999887544333 3344568899999999999999999999999


Q ss_pred             CCCCCCCCeEEEcc
Q psy8774         169 GPGPWSPKLSLMTA  182 (427)
Q Consensus       169 g~~~~s~~~~~~t~  182 (427)
                      |.|++|..+.++|.
T Consensus        78 G~g~~S~~~~~~T~   91 (92)
T d1qg3a1          78 GEGPYSSLVSCRTH   91 (92)
T ss_dssp             CBCCCCCCEEEECC
T ss_pred             cCcCCCCCEEEEcC
Confidence            99999999999884

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.6e-14  Score=107.00  Aligned_cols=96  Identities=15%  Similarity=0.171  Sum_probs=71.5

Q ss_pred             cCCCCCce--EEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         185 MVRAPLGV--KALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       185 ~p~~p~~l--~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      .|.+|..+  .+...+.+++.|+|++|...++.|.+|.|+|+..+... ...                            
T Consensus        10 ~P~~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~-~~~----------------------------   60 (108)
T d1wf5a1          10 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPW-TVL----------------------------   60 (108)
T ss_dssp             CCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCC-EEE----------------------------
T ss_pred             CCCCCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCc-eEE----------------------------
Confidence            34455543  44456788999999999766678999999998763211 010                            


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                       ........++++|.+|.|++.|.|+|+|.|..|.|.+|..+...|.|
T Consensus        61 -~~~~~~~~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~t~P  107 (108)
T d1wf5a1          61 -LASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLP  107 (108)
T ss_dssp             -ESSCCTTCCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECC
T ss_pred             -eeeecCCccEEEECCCCCCCEEEEEEEEEcCCcCCCCcCCcCCEECC
Confidence             12234556789999999999999999999999999999877766644

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=3.6e-14  Score=107.90  Aligned_cols=100  Identities=22%  Similarity=0.264  Sum_probs=77.3

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      .+.|.+|.++.+..++.++|.|+|+++...++.+.+|.|+|+.....  ..|                            
T Consensus        13 ~~~P~pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~--~~~----------------------------   62 (117)
T d1uema_          13 SDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVS--NSW----------------------------   62 (117)
T ss_dssp             CCSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTE--EEE----------------------------
T ss_pred             CccCcCCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCc--eee----------------------------
Confidence            45778999999999999999999998876667899999998876322  222                            


Q ss_pred             ccc-cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccce-EEeecCCCCC
Q psy8774         263 WSQ-KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV-TVKVKPEDVP  314 (427)
Q Consensus       263 ~~~-~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~-~~~t~~~~~P  314 (427)
                       .. ......++++|.+|.|++.|.|+|+|+|..|.|.+|... .++| +..+|
T Consensus        63 -~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~v~t-~~~~P  114 (117)
T d1uema_          63 -QTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRT-QDSGP  114 (117)
T ss_dssp             -EEEEEEECSSEEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEEC-CCSSC
T ss_pred             -EEeccccccccceECCCCCCCEEEEEEEEEeCCcCCCCcCCCcCEEe-CCCCc
Confidence             11 122345789999999999999999999999999988764 3556 33444

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.49  E-value=8.8e-14  Score=101.94  Aligned_cols=87  Identities=20%  Similarity=0.257  Sum_probs=70.2

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      |+.+|.++.+...+.+++.|+|.+|. .+.++.+.+|.|+|+..+.. .+....   ...+.+.+.+|.+++.|.|+|+|
T Consensus         1 PP~~P~~~~v~~~~~~sv~l~W~pP~-~~~~~~i~~Y~V~~~~~~~~-~~~~~~~~~~~~~~~~v~~L~~~~~Y~frV~A   78 (98)
T d1x5ya1           1 PTSAPQHLTVEDVTDTTTTLKWRPPD-RIGAGGIDGYLVEYCLEGSE-EWVPANKEPVERCGFTVKDLPTGARILFRVVG   78 (98)
T ss_dssp             CCCCCEEEEEEEECSSEEEEEEECCS-CCCSSCCCEEEEEEEETTCC-CCEESSSSCBSSSEEEEECCCTTCCEEEEEEE
T ss_pred             CCCCCcCcEEEEccCCEEEEEEECCC-cCCCCCceEEEEEEEecCcc-eeEEeeeecCceeEEEECCCcCCeEEEEEEEE
Confidence            56789999999999999999999874 34445799999999987432 333222   34688999999999999999999


Q ss_pred             eeCCCCCCCCCC
Q psy8774         165 ITKAGPGPWSPK  176 (427)
Q Consensus       165 ~~~~g~~~~s~~  176 (427)
                      .|..|.|.+|..
T Consensus        79 ~n~~G~s~~s~~   90 (98)
T d1x5ya1          79 VNIAGRSEPATL   90 (98)
T ss_dssp             EETTEECCCCCC
T ss_pred             ECCCcCCCCcCC
Confidence            999999876643

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=6.2e-14  Score=104.83  Aligned_cols=101  Identities=17%  Similarity=0.196  Sum_probs=79.0

Q ss_pred             eEEEcccccCCCCCceE-EEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeee
Q psy8774         177 LSLMTARDMVRAPLGVK-ALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTM  254 (427)
Q Consensus       177 ~~~~t~~~~p~~p~~l~-~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (427)
                      +.++|..+.|.+|.++. +..++.+++.|+|++|...+| .+.+|.|+++.....  ..+                    
T Consensus         2 v~~~T~~~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~--~~~--------------------   59 (107)
T d2crma1           2 VEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG--NKW--------------------   59 (107)
T ss_dssp             CSCCSCCCCCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSS--CCC--------------------
T ss_pred             EEEECCCCCCcCCCCCEEEeeecCCEEEEEEEECccCCcceEEEEEEEEEeecCC--CcE--------------------
Confidence            34667777888888754 456788999999998876554 689999998766321  111                    


Q ss_pred             ccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         255 TAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                               ........+++.+.+|++++.|.|+|+|.|..|.|++|+.+.++|
T Consensus        60 ---------~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~T  104 (107)
T d2crma1          60 ---------EMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT  104 (107)
T ss_dssp             ---------EEEECSSCSEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCC
T ss_pred             ---------EEeecCCccEEEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEEC
Confidence                     333445677899999999999999999999999999999888877

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=99.49  E-value=5.3e-14  Score=103.77  Aligned_cols=92  Identities=21%  Similarity=0.274  Sum_probs=71.7

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      .++|.+|.++.+.. +.+++.|+|++|..+++.+.+|.|+|+..........                            
T Consensus         3 ~dvP~~P~~~~v~~-~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~----------------------------   53 (100)
T d1cfba1           3 QDVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDA----------------------------   53 (100)
T ss_dssp             CCCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEE----------------------------
T ss_pred             ccCCCcCcCcEEEE-cCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeE----------------------------
Confidence            46789999999864 6789999999998777889999999987632221111                            


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccce
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV  304 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~  304 (427)
                       .........++.+.+|.|++.|.|+|+|.|..|.|.+|.+.
T Consensus        54 -~~~~~~~~~~~~~~~L~p~t~Y~frV~A~n~~G~g~~S~~s   94 (100)
T d1cfba1          54 -AYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHS   94 (100)
T ss_dssp             -EEEEEETTCSEEEEECCSSEEEEEEEEEEETTEECCCCCCC
T ss_pred             -EeeecCCceEEEEecCCCCCEEEEEEEEEeCCcCCCCcCCC
Confidence             11223456688899999999999999999999999988754

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3e-13  Score=101.73  Aligned_cols=100  Identities=25%  Similarity=0.422  Sum_probs=80.7

Q ss_pred             EeCCCCCCCCCCeeeEEEe--ecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEE--EeeeeeEEEEccCCC
Q psy8774          81 YTTPEGPPTGPPANISHHF--QTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIH--RNTTQTKAVFSNLEE  154 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~--~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~--~~~~~~~~~i~~L~p  154 (427)
                      ..|.+.+|..||.++.+..  .+.++|.|+|++|  ...++.+.+|.|.|+......  .+..  .....+++.|.+|.|
T Consensus         4 ~~T~~~~P~~pP~~~~v~~~~~~~~sv~v~W~~P--~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p   81 (111)
T d1x5ka1           4 GTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPP--SEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTL   81 (111)
T ss_dssp             SCSCCCCCCSCCEEEEEEECSSCTTCEEEEEECC--SCCSSCCCEEEEEEESCSSSCTTTSEEEEESTTCSEEEECSCCS
T ss_pred             eEeCCCCCCCCCCCcEEEEecCCCCEEEEEEEcc--ccCCCceeeeEEeeeecCCCCcceeEEEEeCCCeeEEEECCCCC
Confidence            4567788888999988765  4677999999988  466789999999998654332  1222  224578899999999


Q ss_pred             CcEEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         155 GIEYSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       155 ~t~Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      ++.|.|+|+|.|..|.|++|+.+.++|.
T Consensus        82 ~t~Y~~~V~A~n~~G~g~~S~~v~~~T~  109 (111)
T d1x5ka1          82 DTPYYFKIQARNSKGMGPMSEAVQFRTP  109 (111)
T ss_dssp             SSEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred             CCEEEEEEEEEcCCCCcCCCCCEEEECC
Confidence            9999999999999999999999999884

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.7e-13  Score=99.44  Aligned_cols=90  Identities=17%  Similarity=0.271  Sum_probs=75.4

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAG  169 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g  169 (427)
                      .+|..+++...+.+++.|+|++|.  +.++.+.+|.|+|+... ...+.......+++.|.+|.|++.|.|+|+|.|..|
T Consensus         2 ~~P~~~~v~~~s~~si~l~W~~p~--~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   78 (93)
T d1x4xa1           2 DQCKPPQVTCRSATCAQVNWEVPL--SNGTDVTEYRLEWGGVE-GSMQICYCGPGLSYEIKGLSPATTYYCRVQALSVVG   78 (93)
T ss_dssp             CCCCCCCCEEEETTEEEEECCCCS--CSSSCCCEEEEEEESST-TSCCEEEEESCSEEEEESCCSSCEEEEEEEEECSSC
T ss_pred             cCCCCCEEEEeCCCeEEEEEEecc--cCCCeeEEEEEEEccCC-CcceEeecCCccEEEEcccceeeEEEEEEEEEECCc
Confidence            346677778889999999999884  55678999999998763 334445556788999999999999999999999999


Q ss_pred             CCCCCCCeEEEcc
Q psy8774         170 PGPWSPKLSLMTA  182 (427)
Q Consensus       170 ~~~~s~~~~~~t~  182 (427)
                      .|++|..+.++|.
T Consensus        79 ~s~~S~~~~~~Tp   91 (93)
T d1x4xa1          79 AGPFSEVVACVTP   91 (93)
T ss_dssp             CCCBCCCEEEECC
T ss_pred             CcCCCCcEEEEeC
Confidence            9999999998873

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2e-13  Score=99.64  Aligned_cols=83  Identities=25%  Similarity=0.384  Sum_probs=67.4

Q ss_pred             eecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE
Q psy8774          99 FQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS  178 (427)
Q Consensus        99 ~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~  178 (427)
                      ....++|.|+|++|. .+.+..|.+|.|+++..+............+++.|.+|.|++.|.|+|+|.|..|.|++|+.+.
T Consensus        13 ~~~~~sv~l~W~~P~-~~gg~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~   91 (97)
T d2crza1          13 RPKAKEIQLRWGPPL-VDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCD   91 (97)
T ss_dssp             CCCSSEEEEECCCCS-CCTTSCCCEEEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEE
T ss_pred             eeeCCEEEEEEeCCC-cCCCCceeEEEEEEEcCcCCceeEeecCCceEEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCe
Confidence            346789999999884 2333478999999998754444444456688999999999999999999999999999999999


Q ss_pred             EEcc
Q psy8774         179 LMTA  182 (427)
Q Consensus       179 ~~t~  182 (427)
                      +.|.
T Consensus        92 ~~T~   95 (97)
T d2crza1          92 ITTA   95 (97)
T ss_dssp             EECC
T ss_pred             EEeC
Confidence            8874

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.1e-13  Score=101.49  Aligned_cols=100  Identities=14%  Similarity=0.238  Sum_probs=82.0

Q ss_pred             EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-eeeeeEEEEccCCCCcEE
Q psy8774          80 YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-NTTQTKAVFSNLEEGIEY  158 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y  158 (427)
                      .+.|...+| .+|.++++...+.+++.|+|.+|  .+.++++.+|.|+++........... ....+.+.+.+|.|++.|
T Consensus         3 vf~T~~~~P-~~P~~~~~~~~~~~sv~l~W~pp--~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y   79 (105)
T d1x3da1           3 IFTTLSCEP-DIPNPPRIANRTKNSLTLQWKAP--SDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGC   79 (105)
T ss_dssp             CCCCCCSCC-CCCCCCEEEEEETTEEEEECCCC--CCCSSCEEEEEEEECTTTSSSCCEEEEEESCSEEEEESCCTTCEE
T ss_pred             eEECCCCCC-cCCCCCEEEEccCCEEEEEEECC--CCCcCccEEEEEEEecCCCcceeEEEecCCccEEEecCCcCCcEE
Confidence            355655555 67999999999999999999998  45667899999999866443333332 356889999999999999


Q ss_pred             EEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         159 SAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       159 ~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      .|+|+|.|..|.|++|+.+.+.|.
T Consensus        80 ~frV~A~N~~G~s~~S~~~~~~T~  103 (105)
T d1x3da1          80 KFRLSARNDYGTSGFSEEVLYYTS  103 (105)
T ss_dssp             EEECCEEESSCBCCCCCCEEEECS
T ss_pred             EEEEEEECCCeEcCCCCcEEEECC
Confidence            999999999999999999999874

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.8e-13  Score=103.02  Aligned_cols=101  Identities=24%  Similarity=0.448  Sum_probs=78.7

Q ss_pred             cccccC-CCCCceEEEee--eCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccc
Q psy8774         181 TARDMV-RAPLGVKALAT--SDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAV  257 (427)
Q Consensus       181 t~~~~p-~~p~~l~~~~~--~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (427)
                      |.+.+| .+|.++++...  +.+++.|+|++|...+|.+.+|.|+|+.........+.                      
T Consensus         6 T~~~~P~~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~----------------------   63 (111)
T d1x5ka1           6 TFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV----------------------   63 (111)
T ss_dssp             SCCCCCCSCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSE----------------------
T ss_pred             eCCCCCCCCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeE----------------------
Confidence            434444 67888887654  56799999999988889999999999876433322220                      


Q ss_pred             cccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         258 EDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                            ........++++|.+|.|++.|.|+|+|.|..|.|++|..+.++|.
T Consensus        64 ------~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~  109 (111)
T d1x5ka1          64 ------IEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTP  109 (111)
T ss_dssp             ------EEEESTTCSEEEECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred             ------EEEeCCCeeEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECC
Confidence                  1223456678999999999999999999999999999999999883

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.6e-13  Score=100.58  Aligned_cols=92  Identities=26%  Similarity=0.386  Sum_probs=77.5

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-EEEeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-IHRNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      |.+|..+++...+.++|.|+|++|  .+.+|.+.+|.|+|+..+..... .......+++.|.+|.|++.|.|+|+|.|.
T Consensus         4 P~~p~~~~~~~~s~~si~v~W~~P--~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~   81 (98)
T d1x5la1           4 PSQVVVIRQERAGQTSVSLLWQEP--EQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTS   81 (98)
T ss_dssp             CCCCCCEECSCBCSSCEEEEECCC--SCCCSCCCEEEEEEEESSSCCSSCEEEEESSSEEEECSCCTTCEEEECEEEEET
T ss_pred             CCCCCceEEEeccCCEEEEEEECC--CCCCCCEEEEEEEeecccccceeeEEecCCceEEEECCCCCCCEEEEEEEEEcC
Confidence            356889999999999999999988  46678899999999986433222 333456889999999999999999999999


Q ss_pred             CCCCCCCCCeEEEcc
Q psy8774         168 AGPGPWSPKLSLMTA  182 (427)
Q Consensus       168 ~g~~~~s~~~~~~t~  182 (427)
                      .|.|.+|..+.++|.
T Consensus        82 ~G~g~~S~~v~~~T~   96 (98)
T d1x5la1          82 AGCGRFSQAMEVETG   96 (98)
T ss_dssp             TEECCCCCCEEEECC
T ss_pred             CCCcCCCCCEEEEcC
Confidence            999999999999884

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.2e-13  Score=106.41  Aligned_cols=107  Identities=20%  Similarity=0.306  Sum_probs=85.5

Q ss_pred             EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-------E--EEeeeeeEEEEcc
Q psy8774          81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-------I--HRNTTQTKAVFSN  151 (427)
Q Consensus        81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-------~--~~~~~~~~~~i~~  151 (427)
                      -.+.+++|+.+|.++++...+.++|.|+|++|.....++.+.+|.+.+.........       .  ........+.|.+
T Consensus         7 ~~s~e~~P~~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   86 (125)
T d1uena_           7 GHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPG   86 (125)
T ss_dssp             CCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEES
T ss_pred             ccccCcCCCCCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEeCCCccEEEECC
Confidence            345678898899999999999999999999986445567888999988765322111       1  1224467899999


Q ss_pred             CCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCC
Q psy8774         152 LEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVR  187 (427)
Q Consensus       152 L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~  187 (427)
                      |.|++.|.|+|+|.|..|.|++|..+.++|.++.|+
T Consensus        87 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp  122 (125)
T d1uena_          87 LEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP  122 (125)
T ss_dssp             CCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSS
T ss_pred             CCCCCEEEEEEEEEeCCcccCCCCCEEEECCCCCcC
Confidence            999999999999999999999999999999766543

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=8e-14  Score=101.87  Aligned_cols=82  Identities=20%  Similarity=0.272  Sum_probs=66.6

Q ss_pred             eeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCcee
Q psy8774         197 TSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAE  275 (427)
Q Consensus       197 ~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (427)
                      ...++|.|+|++|...+| .+.+|+|+++..+   ...+                             ........++++
T Consensus        14 ~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~---~~~~-----------------------------~~~~~~~~~~~~   61 (97)
T d2crza1          14 PKAKEIQLRWGPPLVDGGSPISCYSVEMSPIE---KDEP-----------------------------REVYQGSEVECT   61 (97)
T ss_dssp             CCSSEEEEECCCCSCCTTSCCCEEEEEEECTT---SCCC-----------------------------EEEEEESCSEEE
T ss_pred             eeCCEEEEEEeCCCcCCCCceeEEEEEEEcCc---CCce-----------------------------eEeecCCceEEE
Confidence            467899999999876555 7999999998762   2233                             333445667899


Q ss_pred             ccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         276 LTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       276 l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                      |.+|.+++.|.|+|+|.|..|.|++|+.+.+.|.|
T Consensus        62 v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p   96 (97)
T d2crza1          62 VSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP   96 (97)
T ss_dssp             EESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred             EcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence            99999999999999999999999999999888854

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=8.7e-14  Score=101.79  Aligned_cols=94  Identities=14%  Similarity=0.069  Sum_probs=74.6

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      |.+|.++++...+.++|.|+|++|...++ .+.+|.++++....   ..+.                            .
T Consensus         1 P~~P~~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~---~~~~----------------------------~   49 (96)
T d1x5xa1           1 PSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETS---GYGF----------------------------K   49 (96)
T ss_dssp             CCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSS---SCCC----------------------------E
T ss_pred             CccCCCCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccc---eeee----------------------------E
Confidence            56788899999999999999999876555 57788887765422   1110                            1


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                      .......++++|.+|.+++.|.|+|+|.|..|.|.+|..+.++|.|
T Consensus        50 ~~~~~~~~~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~p   95 (96)
T d1x5xa1          50 PKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP   95 (96)
T ss_dssp             EEEEESCSEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred             EeecCCCCEEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence            2234456789999999999999999999999999999999998865

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.4e-13  Score=100.56  Aligned_cols=94  Identities=21%  Similarity=0.333  Sum_probs=78.5

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      ++.+|.++.+...+.++|.|+|.+|. .+.++.+.+|.|.|+..+.........  ...+++.|.+|.|++.|.|+|+|.
T Consensus        10 ~P~~P~~l~~~~~~~~sv~lsW~~P~-~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~rV~A~   88 (107)
T d1x5fa1          10 LPSAPRDVVASLVSTRFIKLTWRTPA-SDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQ   88 (107)
T ss_dssp             CCCCCEEEEEEEECSSCEEEEEECCS-SCSSCCSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEEEEE
T ss_pred             CCcCCCccEEEEecCCEEEEEEECCc-cCCCCceEEEEEEEEeCCCCceEEEEEeCCCccEEEecCCCCCCEEEEEEEEE
Confidence            44679999999999999999999875 355678999999999874444433332  447899999999999999999999


Q ss_pred             eCCCCCCCCCCeEEEcc
Q psy8774         166 TKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       166 ~~~g~~~~s~~~~~~t~  182 (427)
                      |..|.|.+|..+.+.|.
T Consensus        89 n~~G~g~~S~~i~v~T~  105 (107)
T d1x5fa1          89 NKHGSGESSAPLRVETQ  105 (107)
T ss_dssp             CSSCEEEECCCEEEECC
T ss_pred             eCCCCcCCCCCEEEECC
Confidence            99999989999999874

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.47  E-value=3.6e-13  Score=99.38  Aligned_cols=95  Identities=14%  Similarity=0.166  Sum_probs=80.5

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce--E--EEeeeeeEEEEccCCCCcEEEEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--I--HRNTTQTKAVFSNLEEGIEYSAEVQ  163 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~--~--~~~~~~~~~~i~~L~p~t~Y~~~V~  163 (427)
                      |+.+|.++.+...+.++|.|+|++++....++.+.+|.|+|+..+.....  .  .......++.|.+|.|++.|.|+|+
T Consensus         1 P~~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~   80 (101)
T d1x4ya1           1 PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQ   80 (101)
T ss_dssp             CCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEEE
T ss_pred             CCCCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEEcCCeeEEEEcCCCCCCEEEEEEE
Confidence            55789999999999999999999877677888999999999976443322  1  2234578899999999999999999


Q ss_pred             EeeCCCCCCCCCCeEEEcc
Q psy8774         164 AITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       164 a~~~~g~~~~s~~~~~~t~  182 (427)
                      |.|..|.|++|+.+.++|.
T Consensus        81 a~n~~G~s~~S~~~~~~T~   99 (101)
T d1x4ya1          81 CFNEGGESEFSNVMICETK   99 (101)
T ss_dssp             EECTTCCCCCCCCEEEECC
T ss_pred             EEcCCCCCCCCCcEEEEcc
Confidence            9999999999999999884

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.9e-13  Score=98.69  Aligned_cols=89  Identities=24%  Similarity=0.365  Sum_probs=75.5

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-EEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCC
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-IHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGP  170 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~  170 (427)
                      |..+++...+.++|.|+|++|  ...+|.+.+|.|+++........ .......+.+.+.+|.|++.|.|+|+|.|..|.
T Consensus         4 ~~~l~~~~~t~~si~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   81 (95)
T d2djsa1           4 VPIMHQVSATMRSITLSWPQP--EQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGY   81 (95)
T ss_dssp             CSCCEEEEECSSEEEEECCCC--SCCSSCEEEEEEEEEETTSCSTTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSCE
T ss_pred             CCccEEEeecCCEEEEEEEEC--CCCCcceEEeeeeeeeeccCcceeEeecCCccEEEEeecCCccEEEEEEEEEcCCCC
Confidence            447899999999999999998  46778999999999987544333 333456889999999999999999999999999


Q ss_pred             CCCCCCeEEEcc
Q psy8774         171 GPWSPKLSLMTA  182 (427)
Q Consensus       171 ~~~s~~~~~~t~  182 (427)
                      |.+|+.+.++|.
T Consensus        82 g~~S~~~~~~T~   93 (95)
T d2djsa1          82 GKFSGKMCFQTL   93 (95)
T ss_dssp             EEECCCEEEECC
T ss_pred             CCCCCCEEEEeC
Confidence            999999999874

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.4e-13  Score=103.24  Aligned_cols=103  Identities=28%  Similarity=0.374  Sum_probs=79.6

Q ss_pred             cccccC-CCCCceEEEeeeCcEEEEEeeeCCCC--CCceeEEEEEEEecccccccccccccccccccccceeEEeeeccc
Q psy8774         181 TARDMV-RAPLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAV  257 (427)
Q Consensus       181 t~~~~p-~~p~~l~~~~~~~~si~v~W~~p~~~--~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (427)
                      |.++.| .+|.++.+...+.+++.|+|++|...  ++.+.+|.|.|+.........+...                    
T Consensus         3 T~~~~P~~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~--------------------   62 (109)
T d1va9a1           3 TEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV--------------------   62 (109)
T ss_dssp             SSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC--------------------
T ss_pred             CcCCCCCCCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeee--------------------
Confidence            444444 68999999999999999999998653  4689999999998743332222000                    


Q ss_pred             cccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         258 EDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                            .........++.|.+|.|++.|.|+|+|+|..|.|++|.++.++|.
T Consensus        63 ------~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~  108 (109)
T d1va9a1          63 ------EMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL  108 (109)
T ss_dssp             ------BCCCCSSEEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred             ------EEecCCCeeEEEECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence                  1122345678999999999999999999999999999999988873

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2e-13  Score=101.21  Aligned_cols=96  Identities=16%  Similarity=0.210  Sum_probs=75.1

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      +.|.+|.++++...+.+++.|+|++|...+|.+.+|.|+|+...........  .                       ..
T Consensus         1 d~P~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~--~-----------------------~~   55 (103)
T d1qg3a2           1 EVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGP--M-----------------------KK   55 (103)
T ss_dssp             CCCCCCCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSC--C-----------------------EE
T ss_pred             CcCccCCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccccc--e-----------------------EE
Confidence            4678999999999999999999999998889999999999877432211110  0                       00


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccce
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKV  304 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~  304 (427)
                      .........+++|.+|++++.|.|+|+|+|..|.|+.+..+
T Consensus        56 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~   96 (103)
T d1qg3a2          56 VLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAI   96 (103)
T ss_dssp             EEECCTTCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEE
T ss_pred             EEecCCCceEEEEeecCCCCEEEEEEEEEcCCccCCCcccc
Confidence            12233456789999999999999999999999999888643

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.46  E-value=8.2e-14  Score=106.94  Aligned_cols=118  Identities=14%  Similarity=0.130  Sum_probs=82.4

Q ss_pred             cccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         181 TARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       181 t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      +..+.|.+|.++++.. +.+++.|+|++|...+|.|.+|.|+|+...............         ...      .+.
T Consensus         3 ~~~~~P~aP~~v~v~~-~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~---------~~~------~~~   66 (123)
T d1wfta_           3 SGSSGPGAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVF---------MRI------YCG   66 (123)
T ss_dssp             CSSSCCCCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEE---------EEE------EEE
T ss_pred             CCCCCCcCCcccEEEe-CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeee---------EEE------ecC
Confidence            3456788999999875 688999999999988899999999999874332221100000         000      000


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                      ..+.........++.|.+|+|++.|.|+|+|+|..|.|++|....++|.....|
T Consensus        67 ~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~~P  120 (123)
T d1wfta_          67 LKTSCTVTAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKSGP  120 (123)
T ss_dssp             SCSEEEEEHHHHTTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCSSC
T ss_pred             CceeEeecCCccEEEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCCCC
Confidence            001122333456788999999999999999999999999999888887554444

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.46  E-value=1.1e-13  Score=101.04  Aligned_cols=90  Identities=18%  Similarity=0.265  Sum_probs=70.4

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCC-CCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAG-RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~-~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      +|+.+|.++++..++.+++.|+|++|... ++.+.+|.|+|+..+...  .+..                          
T Consensus         5 ~P~~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~--~~~~--------------------------   56 (95)
T d2ibga1           5 DPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAG--EYFK--------------------------   56 (95)
T ss_dssp             CCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCS--CCEE--------------------------
T ss_pred             CCCCCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecc--eeee--------------------------
Confidence            45578999999999999999999977543 467999999999763221  1200                          


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                       ........+++.|.+|+|++.|.|+|+|+|..|.|++|.
T Consensus        57 -~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~Ss   95 (95)
T d2ibga1          57 -ATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSA   95 (95)
T ss_dssp             -EEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCC
T ss_pred             -eeccCCceeEEEEeeccCCeEEEEEEEEEeCCccCCCCC
Confidence             122345677899999999999999999999999998874

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.3e-13  Score=101.68  Aligned_cols=99  Identities=23%  Similarity=0.270  Sum_probs=73.8

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      +.|.+|..+.+ ....+++.|+|++|...+| .|.+|.|+|+..+.......   ..                       
T Consensus         1 DvP~~P~~~~~-~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~---~~-----------------------   53 (101)
T d2haza1           1 DTPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK---WY-----------------------   53 (101)
T ss_dssp             CCCCCCEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE---EE-----------------------
T ss_pred             CcCcCCccCEE-EeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeee---ee-----------------------
Confidence            35788866555 4577899999999876665 69999999998643211111   00                       


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                       ..........++|.+|.|++.|.|+|+|.|..|.|.+|..+.++|.|
T Consensus        54 -~~~~~~~~~~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P  100 (101)
T d2haza1          54 -DAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP  100 (101)
T ss_dssp             -EHHHHHHHSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred             -eeecccceeEEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence             01112334678999999999999999999999999999999998865

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=2.4e-13  Score=100.35  Aligned_cols=97  Identities=18%  Similarity=0.259  Sum_probs=78.5

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      |+.+|.++.+..++.++|.|+|+++..  .++.+.+|+|+|+.........+.                           
T Consensus         1 P~~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~---------------------------   53 (101)
T d1x4ya1           1 PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYK---------------------------   53 (101)
T ss_dssp             CCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCC---------------------------
T ss_pred             CCCCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeee---------------------------
Confidence            467999999999999999999997643  357999999999986433222220                           


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                       .........+++|.+|.|++.|.|+|+|+|..|.|++|..+.++|.
T Consensus        54 -~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~   99 (101)
T d1x4ya1          54 -KDMVEGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETK   99 (101)
T ss_dssp             -CEEEETTCCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECC
T ss_pred             -EEEEcCCeeEEEEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEcc
Confidence             1233456778999999999999999999999999999999999884

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2e-13  Score=103.66  Aligned_cols=98  Identities=21%  Similarity=0.208  Sum_probs=76.5

Q ss_pred             CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEE
Q psy8774          86 GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQ  163 (427)
Q Consensus        86 ~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~  163 (427)
                      +.| .+|.++.+...+.++|.|+|+++  .+.++.+.+|.|+|+.......+....  ...+.+.|.+|.|++.|.|+|+
T Consensus        14 ~~P-~pP~~~~v~~~~~~sv~l~W~p~--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~   90 (117)
T d1uema_          14 DLP-GPPSKPQVTDVTKNSVTLSWQPG--TPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVR   90 (117)
T ss_dssp             CSC-BCCCCCEEEEECSSCEEEECCCC--BCSSSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEEEEE
T ss_pred             ccC-cCCCCCEEEEccCCEEEEEEECC--CcCCCCeEEEEEEEeccCCceeeEEeccccccccceECCCCCCCEEEEEEE
Confidence            444 57889999999999999999987  456678999999998774333333332  3478899999999999999999


Q ss_pred             EeeCCCCCCCCCCe-EEEcccccC
Q psy8774         164 AITKAGPGPWSPKL-SLMTARDMV  186 (427)
Q Consensus       164 a~~~~g~~~~s~~~-~~~t~~~~p  186 (427)
                      |.|..|.|.+|... .++|....|
T Consensus        91 A~N~~G~s~~S~~s~~v~t~~~~P  114 (117)
T d1uema_          91 AINPQGLSDPSPMSDPVRTQDSGP  114 (117)
T ss_dssp             EEETTEEEEECCCCCCEECCCSSC
T ss_pred             EEeCCcCCCCcCCCcCEEeCCCCc
Confidence            99999998877765 356655443

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=3.5e-14  Score=108.55  Aligned_cols=103  Identities=14%  Similarity=0.148  Sum_probs=79.4

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccc-cccccccccccccccccceeEEeeeccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVE-DLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      .+|.+|.++.+..++.++|.|+|++|...++ .+.+|.|+|+..... ....+                           
T Consensus        14 ~pp~~P~~p~v~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~---------------------------   66 (120)
T d1wfua_          14 VPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSY---------------------------   66 (120)
T ss_dssp             CCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCE---------------------------
T ss_pred             cCCCcCCCCEEeEecCCEEEEEEECCcccCcccccceeeeeeeecccccccce---------------------------
Confidence            3566777778888899999999999876544 678888888754211 11122                           


Q ss_pred             cccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCc
Q psy8774         262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPL  315 (427)
Q Consensus       262 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~  315 (427)
                        ........++++|.+|+|++.|.|+|+|+|..|.|.+|..+.+.|....+|.
T Consensus        67 --~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~pPs  118 (120)
T d1wfua_          67 --GVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRESGPS  118 (120)
T ss_dssp             --EEEEEESCSEEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCCCCS
T ss_pred             --eeeccccccEEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCCCcCc
Confidence              3334456678999999999999999999999999999999999987666664

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.4e-14  Score=119.12  Aligned_cols=174  Identities=14%  Similarity=0.043  Sum_probs=72.9

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEE
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYY   81 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~   81 (427)
                      +...++++|.|+|++|.+.+|.+.+|.|+|+......+..    ....+....|.+.+.|.++|.+.+..+.+.......
T Consensus        11 ~~~~s~~si~vsW~pP~~~ng~i~~Y~V~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~~v~~~~~~~~~~~~~~~~   86 (196)
T d2dtge2          11 SVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELF----ELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDS   86 (196)
T ss_dssp             EEECSSSCEEEEEECCCCSSSSCSEEECCEEEECCCCSCT----TCSSSCSCCCCCC-----------------------
T ss_pred             EEeccCCEEEEEEECCCCCCCcEEEEEEEEEcCCCCCcee----EEeeEEeccccceeEEEEEEEEEcCCccccCcCCcc
Confidence            3457889999999999887889999999998776543321    112222335778899999999998887665332111


Q ss_pred             -eCCC------CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCC
Q psy8774          82 -TTPE------GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEE  154 (427)
Q Consensus        82 -~t~~------~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p  154 (427)
                       ....      ..+...+..+.+.......+.+.|..+..  .......|.+.+................+++.|.+|.|
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p  164 (196)
T d2dtge2          87 AGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRP--SRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRH  164 (196)
T ss_dssp             -----------------------------------------------------------CCSCSCEECSCSEEEECSSCS
T ss_pred             ceecCCCCccccccccCCcCcEEEeccCCceeecccCcCC--CccceEEEEEEeecCCCccEEEEeccceEEEEECCCCC
Confidence             1111      11112233444445555666677766531  11122223333333322233333445688999999999


Q ss_pred             CcEEEEEEEEeeCCCCCCC---CCCeEEEc
Q psy8774         155 GIEYSAEVQAITKAGPGPW---SPKLSLMT  181 (427)
Q Consensus       155 ~t~Y~~~V~a~~~~g~~~~---s~~~~~~t  181 (427)
                      ++.|.|+|+|+|..|.+..   +..+.++|
T Consensus       165 ~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT  194 (196)
T d2dtge2         165 FTGYRIELQACNQDTPEERCSVAAYVSART  194 (196)
T ss_dssp             SCEEEECCEEESCSSSSCCBCCCCCEEEEC
T ss_pred             CCEEEEEEEEEECCCCCCCccCcceEEeeC
Confidence            9999999999999888743   44455554

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.8e-13  Score=99.62  Aligned_cols=84  Identities=31%  Similarity=0.569  Sum_probs=72.8

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYY   81 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~   81 (427)
                      ...+++++.|+|++|.+.++.+.+|.|+|+..+...|.... ....+++.+.+|.|++.|.|+|+|.|..|.|..+...+
T Consensus         9 ~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~   88 (94)
T d2dn7a1           9 STTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFEKEI   88 (94)
T ss_dssp             EECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEETTEEEEEEEEEE
T ss_pred             EEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEEcCCCccEEEEEccCCeeEEEEEEEEEcCCcCCCCccEEE
Confidence            45678899999999988888999999999988877776655 77888999999999999999999999999998877777


Q ss_pred             eCCCC
Q psy8774          82 TTPEG   86 (427)
Q Consensus        82 ~t~~~   86 (427)
                      .|.++
T Consensus        89 ~T~ed   93 (94)
T d2dn7a1          89 RTPED   93 (94)
T ss_dssp             ECCCC
T ss_pred             eeCCC
Confidence            77543

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=2.5e-13  Score=101.39  Aligned_cols=93  Identities=26%  Similarity=0.263  Sum_probs=72.2

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      ..+|.+|.++.+...+.+++.|+|.++...++.|.+|.|+|+.....  ..|...                         
T Consensus         8 ~~pP~~P~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~--~~~~~~-------------------------   60 (108)
T d1x4za1           8 LSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKV--GDWILA-------------------------   60 (108)
T ss_dssp             CCCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSC--CCCEEE-------------------------
T ss_pred             cCCCccCCCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCC--CceEEE-------------------------
Confidence            34678999999999999999999987765556899999999876322  122000                         


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK  303 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~  303 (427)
                       .........++++.+|.|++.|.|+|+|+|..|.|.+|.+
T Consensus        61 -~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~p  100 (108)
T d1x4za1          61 -TSAIPPSRLSVEITGLEKGISYKFRVRALNMLGESEPSAP  100 (108)
T ss_dssp             -EEEECTTCCEEEEESCCTTCEEEEEEEEEETTEECCCCCC
T ss_pred             -EEeecCCccEEEECCCCCCCEEEEEEEEECCCcCCCCCCC
Confidence             1223456678999999999999999999999999888764

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=9.1e-14  Score=104.68  Aligned_cols=102  Identities=18%  Similarity=0.257  Sum_probs=78.3

Q ss_pred             ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccc
Q psy8774         182 ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       182 ~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      +.++|.+|.++++...+.+++.|+|++|...++.+.+|.|+|+.........+...                        
T Consensus         7 p~~~P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~------------------------   62 (111)
T d1wisa1           7 PPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI------------------------   62 (111)
T ss_dssp             CCCCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEE------------------------
T ss_pred             CCCCCcCCCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeee------------------------
Confidence            45678899999999999999999999988777899999999987643322222000                        


Q ss_pred             cccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc-eEEee
Q psy8774         262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK-VTVKV  308 (427)
Q Consensus       262 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~-~~~~t  308 (427)
                       .........+++.|.+|.|++.|.|+|+|.|..|.|.+|.+ ..++|
T Consensus        63 -~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~~~T  109 (111)
T d1wisa1          63 -HQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQT  109 (111)
T ss_dssp             -EEEESCTTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEEC
T ss_pred             -eeeecccceeEEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCCCCEEc
Confidence             01223455678999999999999999999999999999875 33554

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=2.4e-13  Score=98.63  Aligned_cols=81  Identities=19%  Similarity=0.245  Sum_probs=69.6

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEE
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYY   81 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~   81 (427)
                      ...+.++|.|+|++|.+++++|.+|.|+|+..++..+.... ....+++.+.+|.|++.|.|+|+|.|..|.|.++...+
T Consensus        10 ~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~N~~G~s~ps~~~~   89 (93)
T d2vkwa2          10 MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVF   89 (93)
T ss_dssp             ECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEE
T ss_pred             EEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeeeccCCceEEEEeccccceEEEEEEEEEcCCCCcCCEeEEE
Confidence            45778999999999998888999999999987765443333 67788999999999999999999999999998887777


Q ss_pred             eC
Q psy8774          82 TT   83 (427)
Q Consensus        82 ~t   83 (427)
                      .|
T Consensus        90 ~T   91 (93)
T d2vkwa2          90 RT   91 (93)
T ss_dssp             EC
T ss_pred             Ee
Confidence            66

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.8e-13  Score=103.32  Aligned_cols=93  Identities=17%  Similarity=0.186  Sum_probs=74.2

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      .+|.+|.++++.. ..+++.|+|++|...+|.+.+|.|+|+..+.   ..+                             
T Consensus        19 ~vP~~P~~~~~~~-~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~---~~~-----------------------------   65 (113)
T d1x5ia1          19 RVPEVPSSLHVRP-LVTSIVVSWTPPENQNIVVRGYAIGYGIGSP---HAQ-----------------------------   65 (113)
T ss_dssp             SCCCSCSEEEEEE-ETTEEEEEEECCSCTTBCCCEEEEEECSSCG---GGE-----------------------------
T ss_pred             CCCCCCEeeeeee-CCCEEEEEEEccccCCccEEEEEEEeeeccc---cce-----------------------------
Confidence            4678999999865 5689999999998778899999999976522   122                             


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                      ........++++|.+|.+++.|.|+|+|+|..|.|+.+. ..++|.|
T Consensus        66 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~~~-~~~~T~P  111 (113)
T d1x5ia1          66 TIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLY-ESAVTRP  111 (113)
T ss_dssp             EEECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCC-CCEECCC
T ss_pred             eeeeeCCccEEEEeccccCcEEEEEEEEECCCcCCCCee-eEEEeCC
Confidence            233455678999999999999999999999999998765 4566644

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=99.44  E-value=3.1e-13  Score=100.49  Aligned_cols=93  Identities=15%  Similarity=0.191  Sum_probs=73.1

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      |+.+|.++++...+.++|.|+|+++..  .+|.+.+|.|.|+..+.......                            
T Consensus         4 P~~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~----------------------------   55 (105)
T d1cfba2           4 PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN----------------------------   55 (105)
T ss_dssp             CSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE----------------------------
T ss_pred             CCCCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeE----------------------------
Confidence            446899999999999999999997653  46899999999987643221111                            


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEE
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV  306 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~  306 (427)
                       ........++++|.+|.+++.|.|+|+|.|..|.|+.|..+.+
T Consensus        56 -~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~N~~G~gp~S~~~v~   98 (105)
T d1cfba2          56 -NNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVV   98 (105)
T ss_dssp             -EEECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEE
T ss_pred             -EEecCCCccEEEECCCCCCCEEEEEEEEEeCCcCCCCCCCcEe
Confidence             1223455678999999999999999999999999999876544

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=4.4e-13  Score=100.07  Aligned_cols=100  Identities=23%  Similarity=0.290  Sum_probs=76.5

Q ss_pred             EEeCCCCCCCCCCee-eEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE-EeeeeeEEEEccCCCCcE
Q psy8774          80 YYTTPEGPPTGPPAN-ISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH-RNTTQTKAVFSNLEEGIE  157 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~-~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~  157 (427)
                      .+.|.++.|. +|.. +.+...+.+++.|+|++|. .+.+..+.+|.|+++.......+.. .....+.+.+.+|.|++.
T Consensus         3 ~~~T~~~~P~-~P~~~~~~~~~~~~sv~l~W~~P~-~~~g~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~   80 (107)
T d2crma1           3 EFTTCPDKPG-IPVKPSVKGKIHSHSFKITWDPPK-DNGGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCF   80 (107)
T ss_dssp             SCCSCCCCCC-CCCCCEEEEEEETTEEEEECCCCT-TCCSSCCCEEEEEEEESSSSCCCEEEECSSCSEEEECSCCTTSC
T ss_pred             EEECCCCCCc-CCCCCEEEeeecCCEEEEEEEECc-cCCcceEEEEEEEEEeecCCCcEEEeecCCccEEEEeccCCCCE
Confidence            3556666664 4555 4445678899999999884 2333478899999987754444433 335588899999999999


Q ss_pred             EEEEEEEeeCCCCCCCCCCeEEEc
Q psy8774         158 YSAEVQAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       158 Y~~~V~a~~~~g~~~~s~~~~~~t  181 (427)
                      |.|+|+|.|..|.|.+|+.+.++|
T Consensus        81 Y~~rV~A~n~~G~s~~S~~v~v~T  104 (107)
T d2crma1          81 YRLRVYCISDGGQSAVSESLLVQT  104 (107)
T ss_dssp             EEEEEEEEETTEECCCCCCCCCCC
T ss_pred             EEEEEEEECCCcCcCCCCcEEEEC
Confidence            999999999999999998888776

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=5.3e-13  Score=99.60  Aligned_cols=88  Identities=22%  Similarity=0.328  Sum_probs=71.1

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe----eeeeEEEEccCCCCcEEEEEE
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN----TTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      .|+.+|.++.+...+.+++.|+|.++  .+.++.|.+|.|+|+.......+....    .....+.+.+|.|++.|.|+|
T Consensus         9 ~pP~~P~~~~v~~~~~~sv~l~W~p~--~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV   86 (108)
T d1x4za1           9 SPPEAPDRPTISTASETSVYVTWIPR--GNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRV   86 (108)
T ss_dssp             CCCCCCCCCEEEECCSSEEEEECCCC--CCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEE
T ss_pred             CCCccCCCCEEEEccCCEEEEEEECC--CCCCCccEEEEEEEEecCCCCceEEEEEeecCCccEEEECCCCCCCEEEEEE
Confidence            35677888999999999999999876  455668999999999875444443222    347789999999999999999


Q ss_pred             EEeeCCCCCCCCCC
Q psy8774         163 QAITKAGPGPWSPK  176 (427)
Q Consensus       163 ~a~~~~g~~~~s~~  176 (427)
                      +|.|..|.|.+|.+
T Consensus        87 ~A~N~~G~s~~S~p  100 (108)
T d1x4za1          87 RALNMLGESEPSAP  100 (108)
T ss_dssp             EEEETTEECCCCCC
T ss_pred             EEECCCcCCCCCCC
Confidence            99999999877654

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=3.6e-13  Score=103.67  Aligned_cols=108  Identities=24%  Similarity=0.328  Sum_probs=81.6

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCC--CCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~--~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      .|+.+|.++++...+.++|.|+|++|...  ++.+.+|.+.++.............                       .
T Consensus        13 ~P~~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----------------------~   69 (125)
T d1uena_          13 LPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHI-----------------------E   69 (125)
T ss_dssp             CCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCC-----------------------C
T ss_pred             CCCCCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecc-----------------------c
Confidence            34468999999999999999999988642  5789999999987632221111000                       0


Q ss_pred             cccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       262 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                      .+.........++.|.+|.|++.|.|+|+|+|..|.|++|..+.++|.+..||
T Consensus        70 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp  122 (125)
T d1uena_          70 KKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP  122 (125)
T ss_dssp             EEEEEEESSCSEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSS
T ss_pred             ceEEEeCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCCCcC
Confidence            00223345667899999999999999999999999999999999999765555

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.2e-13  Score=103.30  Aligned_cols=100  Identities=15%  Similarity=0.112  Sum_probs=77.8

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ..+.||+++.+.. +.++|.|+|++|...++.+.+|.|+|+...... ...                             
T Consensus         6 s~~sPP~~~~~~~-t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~-~~~-----------------------------   54 (108)
T d1v5ja_           6 SGLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGW-EVL-----------------------------   54 (108)
T ss_dssp             CCCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCC-EEE-----------------------------
T ss_pred             CCCCcCCCeEEEE-cCCEEEEEEEecccCCCceeEEEEEeeeeeeee-eec-----------------------------
Confidence            3457899998754 788999999998877788999999998763211 010                             


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                      ........++++|.+|.+++.|.|+|+|+|..|.|.+|..+.++|.....|
T Consensus        55 ~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~~~P  105 (108)
T d1v5ja_          55 DPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLSGP  105 (108)
T ss_dssp             EEEECSSCCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCSSC
T ss_pred             cccccceeeeEEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCCCCC
Confidence            122345677899999999999999999999999999999888888544444

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.43  E-value=5.7e-13  Score=97.05  Aligned_cols=87  Identities=15%  Similarity=0.214  Sum_probs=70.6

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE---eeeeeEEEEccCCCCcEEEEEEE
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR---NTTQTKAVFSNLEEGIEYSAEVQ  163 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~  163 (427)
                      .|..+|.++++...+.++|.|+|++|. ...++.+.+|.|.|+..+....+...   ....+++.|.+|.|++.|.|+|+
T Consensus         5 ~P~~~P~~~~v~~~s~tsv~l~W~~P~-~~~~~~i~gY~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~   83 (95)
T d2ibga1           5 DPMPVPELLEIEEYSETAVVLHWSLAS-DADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQ   83 (95)
T ss_dssp             CCCCCCEECCCBCCSSSCEEEEEECCT-TCCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEE
T ss_pred             CCCCCCcCeEEEEeCCCEEEEEEEeee-eccCCcccccceeEeeeeecceeeeeeccCCceeEEEEeeccCCeEEEEEEE
Confidence            355678899999999999999999775 34456899999999987544433322   24478999999999999999999


Q ss_pred             EeeCCCCCCCC
Q psy8774         164 AITKAGPGPWS  174 (427)
Q Consensus       164 a~~~~g~~~~s  174 (427)
                      |.|..|.|++|
T Consensus        84 A~n~~G~s~~S   94 (95)
T d2ibga1          84 SFSAASASEFS   94 (95)
T ss_dssp             EECSSCBCCCC
T ss_pred             EEeCCccCCCC
Confidence            99999999876

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

Probab=99.42  E-value=4.4e-13  Score=95.99  Aligned_cols=85  Identities=21%  Similarity=0.359  Sum_probs=69.9

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      +|.+|.+|.+..++.+++.|+|++|. .++.+.+|.|++...                                      
T Consensus         3 AP~~P~~l~~~~~~~~sv~lsW~~p~-~~~~i~~Y~i~~~~~--------------------------------------   43 (88)
T d1k85a_           3 APTAPTNLASTAQTTSSITLSWTAST-DNVGVTGYDVYNGTA--------------------------------------   43 (88)
T ss_dssp             SCCCCEEEEEEEECSSCEEEEEECCS-CCSSEEEEEEEESSS--------------------------------------
T ss_pred             CcCCCCCcEEEEecCCEEEEEEeCCC-CCCCEEEEEEEccce--------------------------------------
Confidence            47899999999999999999999887 445789999975321                                      


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccC-CCCCccceEEee
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNG-LGRLSGKVTVKV  308 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G-~g~~s~~~~~~t  308 (427)
                      .......+++++.+|.|++.|.|+|+|+|..| .|.+|..+.++|
T Consensus        44 ~~~~~~~t~~~~~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT   88 (88)
T d1k85a_          44 LATTVTGTTATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT   88 (88)
T ss_dssp             EEEEESSSEEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred             EEEecCCCEEEECCCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence            01223457899999999999999999999999 799999888775

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=4.7e-13  Score=103.32  Aligned_cols=98  Identities=20%  Similarity=0.207  Sum_probs=76.9

Q ss_pred             cccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         183 RDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       183 ~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      .+.|.+|.++++...+.+++.|+|+++...++.+..|.++|+..........                            
T Consensus        14 ~d~P~~P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~----------------------------   65 (127)
T d1ueya_          14 YDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH----------------------------   65 (127)
T ss_dssp             CCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEE----------------------------
T ss_pred             cccCcCCCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEE----------------------------
Confidence            3577899999999999999999999998777889999999987632221111                            


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceE-Eeec
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT-VKVK  309 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~-~~t~  309 (427)
                       ..........+.+.+|++++.|.|+|+|+|..|.|.+|.... ++|.
T Consensus        66 -~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~  112 (127)
T d1ueya_          66 -HQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTK  112 (127)
T ss_dssp             -EEEEEESSCCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECC
T ss_pred             -EEeecCCceEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcC
Confidence             222334566888999999999999999999999999887643 4453

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.8e-13  Score=102.07  Aligned_cols=94  Identities=22%  Similarity=0.351  Sum_probs=76.0

Q ss_pred             EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEccCCCCcE
Q psy8774          80 YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSNLEEGIE  157 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~t~  157 (427)
                      .+.|.+++| .+|.++++...+.+++.|+|++|  ...+|.+.+|.|+|+..+......  .......++.|.+|.|++.
T Consensus         3 ~v~T~e~vP-~~p~~l~~~~~~~~sv~l~W~~P--~~~ng~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~   79 (106)
T d1wfna1           3 LVRTHEDVP-GPVGHLSFSEILDTSLKVSWQEP--GEKNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTT   79 (106)
T ss_dssp             SCCSSCCSC-CCCSCCEEESCCSSEEEEECCCC--TTCCSCCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCE
T ss_pred             EEEcCCCCC-cCCCCcEEEEecCCEEEEEEECC--CCCCCcEEeEEEEEEECCCCcceEEEecCCCeeEEEEccCCCCCE
Confidence            356777777 47889999999999999999988  466788999999998874333222  3335578999999999999


Q ss_pred             EEEEEEEeeCCCCCCCCCC
Q psy8774         158 YSAEVQAITKAGPGPWSPK  176 (427)
Q Consensus       158 Y~~~V~a~~~~g~~~~s~~  176 (427)
                      |.|+|+|+|..|.|+.|..
T Consensus        80 Y~~~V~A~n~~G~g~~s~~   98 (106)
T d1wfna1          80 YTIEVAAMTSKGQGQVSAS   98 (106)
T ss_dssp             EEEEEEEECSSCEEEEEEE
T ss_pred             EEEEEEEECCCCCcCCcCC
Confidence            9999999999999876654

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=7.5e-14  Score=105.98  Aligned_cols=110  Identities=15%  Similarity=0.198  Sum_probs=78.8

Q ss_pred             EEeCCCCCCCCCCeeeEEEe-ecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCC
Q psy8774          80 YYTTPEGPPTGPPANISHHF-QTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEG  155 (427)
Q Consensus        80 ~~~t~~~~p~~~p~~~~~~~-~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~  155 (427)
                      .+.|.+..|+.+|.++.+.. .+++++.|+|++|.....++...+|.+.|+....+.......   .+.+.+.|.+|.++
T Consensus         2 ~~~T~~~~pp~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~i~~L~~~   81 (117)
T d2cspa1           2 EFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVIFPTADSTAVELVRLRSL   81 (117)
T ss_dssp             CCCCCCCCCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEEEEECCTTCSEEEEESHHHHHH
T ss_pred             EEEeCCCCCCCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecccceeeeeeccceeeeeccCCCCC
Confidence            35677778888999999864 567799999999864333333333344343322222222221   34678889999999


Q ss_pred             cEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCC
Q psy8774         156 IEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAP  189 (427)
Q Consensus       156 t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p  189 (427)
                      +.|.|+|+|+|..|.|..|..+.+.+....|..|
T Consensus        82 t~Y~v~V~A~n~~G~s~~S~~v~i~t~~~vP~~P  115 (117)
T d2cspa1          82 EAKGVTVRTLSAQGESVDSAVAAVPPELLVPPTP  115 (117)
T ss_dssp             TCSCBEEEEEESSCCCCCCSCBCCCHHHHSCCCC
T ss_pred             cEEEEEEEEEcCCCcCCCCCCEEeeCCCCCCccc
Confidence            9999999999999999999999998876666655

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=9.2e-13  Score=96.95  Aligned_cols=95  Identities=21%  Similarity=0.300  Sum_probs=76.6

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCC--CcceeEEEEEEEEccCCCce-EEEeeeeeEEEEccCCCCcEEEEEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHR--NGQIVLYNVKFHKKIDANNV-IHRNTTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~--~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      |..||.++++...+.++|.|+|++|.....  .+.+.+|.|+++..+..... ........++.|.+|.|++.|.|+|+|
T Consensus         1 P~~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a   80 (100)
T d1x5ja1           1 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMV   80 (100)
T ss_dssp             CCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECCBCSSEEEEESCCTTCEECCEEEE
T ss_pred             CCCCCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEecCCCccEEEECCCCCCCEEEEEEEE
Confidence            456799999999999999999998753222  24567899998876444333 333355788999999999999999999


Q ss_pred             eeCCCCCCCCCCeEEEcc
Q psy8774         165 ITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~~t~  182 (427)
                      .|..|.|++|..+.++|.
T Consensus        81 ~n~~g~s~~S~~~~~~T~   98 (100)
T d1x5ja1          81 TKGRRSSTWSMTAHGTTF   98 (100)
T ss_dssp             ECSSCBCCCCCCCCEECC
T ss_pred             EeCCcCcCCCCeEEEEec
Confidence            999999999999998884

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.2e-12  Score=95.58  Aligned_cols=92  Identities=14%  Similarity=0.177  Sum_probs=72.6

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE-EEeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI-HRNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      .+|.++++...+.++|.|+|++|. ...+..+..|.++++......... ......+++.|.+|.|++.|.|+|+|.|..
T Consensus         2 ~~P~~~~v~~~~~~si~l~W~~p~-~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~~rV~A~n~~   80 (96)
T d1x5xa1           2 SMPASPVLTKAGITWLSLQWSKPS-GTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSE   80 (96)
T ss_dssp             CCCCCCEEEEECSSEEEEECCCCS-SCCSSSSCEEEEEECCSSSSCCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSS
T ss_pred             ccCCCCEEEEecCCEEEEEEEeec-ccCcceEeeeEEEeeeccceeeeEEeecCCCCEEEECCCCCCCEEEEEEEEEcCC
Confidence            457788888899999999999885 233346778888887663333222 334558899999999999999999999999


Q ss_pred             CCCCCCCCeEEEcc
Q psy8774         169 GPGPWSPKLSLMTA  182 (427)
Q Consensus       169 g~~~~s~~~~~~t~  182 (427)
                      |.|.+|..+.++|.
T Consensus        81 G~s~~S~~~~~~T~   94 (96)
T d1x5xa1          81 GKSNPSEVVEFTTC   94 (96)
T ss_dssp             CEEEECCCEEEECC
T ss_pred             cEeCCCCCEEEEeC
Confidence            99999999998874

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.1e-12  Score=95.44  Aligned_cols=86  Identities=16%  Similarity=0.190  Sum_probs=68.3

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ++| +|.+|++..++.+++.|+|++|.  ++.+.+|+|+|+..+......                              
T Consensus         5 ~vp-~P~~l~v~~~t~~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~------------------------------   51 (95)
T d2fnba_           5 EVP-QLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIF------------------------------   51 (95)
T ss_dssp             CSC-CCTTCEEECCCSSCEEEECCCCC--CSSCCEEEEEEEEETSCCEEE------------------------------
T ss_pred             CcC-cCCCeEEEEEcCCEEEEEEEecC--CceEEeEEEEEEEeeccceEE------------------------------
Confidence            344 79999999999999999999886  356899999998863321111                              


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                      ........++++|.+|.|++.|.|+|+|++..|.|.++.
T Consensus        52 ~~~~~~~~t~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~~   90 (95)
T d2fnba_          52 EDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTT   90 (95)
T ss_dssp             EEECCSSCSEEEECCCCTTSEEEEEEEEEETTEECCCCE
T ss_pred             EEEeCCCCeEEEEecccCCEEEEEEEEEEeCCcEeCCEE
Confidence            123345678999999999999999999999999887764

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=6.9e-13  Score=96.38  Aligned_cols=90  Identities=21%  Similarity=0.272  Sum_probs=70.4

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      |.+|. +.+...+.+++.|+|++|...+|.+.+|.|+|+..+..   .+.                            ..
T Consensus         1 P~~P~-~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~---~~~----------------------------~~   48 (94)
T d2dn7a1           1 PGRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEA---RPN----------------------------TI   48 (94)
T ss_dssp             CCCCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCS---SCE----------------------------EE
T ss_pred             CCCCc-EeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCC---CcE----------------------------EE
Confidence            45675 45666788999999999987788999999999887322   220                            12


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      ......++++|.+|.|++.|.|+|+|+|..|.|..+. ..+.|
T Consensus        49 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T   90 (94)
T d2dn7a1          49 DFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRT   90 (94)
T ss_dssp             EEETTCCEEEEECCCTTCEEEEEEEEEETTEEEEEEE-EEEEC
T ss_pred             EcCCCccEEEEEccCCeeEEEEEEEEEcCCcCCCCcc-EEEee
Confidence            2345677899999999999999999999999999887 44445

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=9.3e-13  Score=97.27  Aligned_cols=90  Identities=12%  Similarity=0.153  Sum_probs=74.2

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEE
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYY   81 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~   81 (427)
                      +.+++++++.|+|++|   .+.+.+|+|+|+..++..+........+++.|.+|.||+.|.|+|+|++..|.+......+
T Consensus         9 ~~~~t~~si~l~W~~p---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~   85 (102)
T d2cuha1           9 ALNLTEGFAVLHWKPP---QNPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNLTSPASITF   85 (102)
T ss_dssp             CCCCSSSCEEEEEECC---SSCCSEEEEEEECSSSCCEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTEECCCEEEEE
T ss_pred             EEEeCCCEEEEEEEee---eccceeeEEEEEeccccceeeeeeeeeeeEEEccEEeeEEEEEEEEEEeCCCCcCCEEEEE
Confidence            5678999999999998   4578999999998777666666577889999999999999999999999999988777777


Q ss_pred             eCCCCCCCCCCeeeEEE
Q psy8774          82 TTPEGPPTGPPANISHH   98 (427)
Q Consensus        82 ~t~~~~p~~~p~~~~~~   98 (427)
                      .|...    +|.++.+.
T Consensus        86 ~T~~~----~P~~l~~~   98 (102)
T d2cuha1          86 TTGLE----APRDLEAK   98 (102)
T ss_dssp             ESCCC----CTTTSSSC
T ss_pred             ECCCC----CCCCCEee
Confidence            87544    45555443

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=9.7e-13  Score=96.82  Aligned_cols=94  Identities=16%  Similarity=0.134  Sum_probs=74.0

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCC----CceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGR----GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~----g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      |+.+|.++++...+.++|.|+|++|...+    +.+.+|.|.|+..+.... .                           
T Consensus         1 P~~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~-~---------------------------   52 (100)
T d1x5ja1           1 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANT-K---------------------------   52 (100)
T ss_dssp             CCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSC-C---------------------------
T ss_pred             CCCCCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcc-e---------------------------
Confidence            45789999999999999999999875432    356788888876532111 1                           


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                         .........+++|.||.|++.|.|+|+|+|..|.|++|..+.++|.
T Consensus        53 ---~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~   98 (100)
T d1x5ja1          53 ---YKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF   98 (100)
T ss_dssp             ---CEECCBCSSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred             ---eEecCCCccEEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence               1223345678999999999999999999999999999999988884

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.37  E-value=1.3e-12  Score=93.36  Aligned_cols=86  Identities=14%  Similarity=0.203  Sum_probs=69.2

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.+|++...+.+++.|+|++|.   +.+.+|.|.|+..+..   ..                             ...
T Consensus         1 DaP~~l~v~~~t~~sv~v~W~~p~---~~~~~Y~v~~~~~~~~---~~-----------------------------~~~   45 (87)
T d1qr4a1           1 DNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPSGK---KN-----------------------------EME   45 (87)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTTCC---EE-----------------------------EEE
T ss_pred             CcCcCcEEEEecCCEEEEEEECCC---CCcceeEEEeecCCcc---ee-----------------------------EEe
Confidence            368999999999999999999987   6789999999876321   11                             223


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      .....++++|.+|.|++.|.|+|+|++..|.|..+. +.+.|
T Consensus        46 ~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~-~~~~T   86 (87)
T d1qr4a1          46 IPVDSTSFILRGLDAGTEYTISLVAEKGRHKSKPTT-IKGST   86 (87)
T ss_dssp             ECTTCSEEEEESCCSSCEEEEEEEEESSSCBCCCEE-EEEEC
T ss_pred             CCCCcCEEEECCCCcCCEEEEEEEEEcCCCCccCEE-EEEEc
Confidence            345678999999999999999999999999887664 45554

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.2e-12  Score=94.22  Aligned_cols=88  Identities=17%  Similarity=0.197  Sum_probs=70.3

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      +.+|.+|++..++.+++.|+|++|.   +.+.+|.|.|+..+......                              ..
T Consensus         2 ld~P~~l~v~~~s~~s~~l~W~~p~---~~~~~y~v~~~~~~~~~~~~------------------------------~~   48 (90)
T d1tena_           2 LDAPSQIEVKDVTDTTALITWFKPL---AEIDGIELTYGIKDVPGDRT------------------------------TI   48 (90)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEETTCTTCCE------------------------------EE
T ss_pred             CCCCCCcEEEEecCCEEEEEEEeCc---eEeccEEEEEEEcCCCceeE------------------------------EE
Confidence            4689999999999999999999886   78899999998864321111                              12


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEe
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK  307 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~  307 (427)
                      ......++++|.+|.|++.|.|+|+|++..|.|..+. ..+.
T Consensus        49 ~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~-~~~~   89 (90)
T d1tena_          49 DLTEDENQYSIGNLKPDTEYEVSLISRRGDMSSNPAK-ETFT   89 (90)
T ss_dssp             EEETTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEE
T ss_pred             EecCCcceeeEeeecCCCEEEEEEEEEeCCCEeCCEE-EEEE
Confidence            3456778999999999999999999999999887664 4443

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.37  E-value=1.2e-12  Score=94.72  Aligned_cols=90  Identities=21%  Similarity=0.279  Sum_probs=70.3

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.+|++...+.+++.|+|++|.   +.+.+|.|+|+...........                            ...
T Consensus         2 daP~~l~v~~~~~~sv~v~W~~p~---~~~~~y~v~y~~~~~~~~~~~~----------------------------~~~   50 (92)
T d1tdqa2           2 DAPKNLRVGSRTATSLDLEWDNSE---AEAQEYKVVYSTLAGEQYHEVL----------------------------VPK   50 (92)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEETTCCCCEEEE----------------------------EEC
T ss_pred             ccCcCCEEEEecCCEEEEEEEecC---CcccceEEEEEEcCCCcceeeE----------------------------EEe
Confidence            478999999999999999999986   7899999999986432222110                            112


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      .....++++|.+|.|++.|.|+|+|++..|.|.++. +.++|
T Consensus        51 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~~-~~~~T   91 (92)
T d1tdqa2          51 GIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPAT-MNART   91 (92)
T ss_dssp             CSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC
T ss_pred             cCCCeeEEEECCccCCCEEEEEEEEEeCCCEecCEE-EEEEC
Confidence            344567899999999999999999999999988664 55554

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.3e-12  Score=96.92  Aligned_cols=92  Identities=17%  Similarity=0.150  Sum_probs=70.3

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      ||.+|.++++..++.++|.|+|++|...+| .+.+|.|+++.........                              
T Consensus         2 Pp~pP~~p~~~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~------------------------------   51 (104)
T d1bpva_           2 PIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLK------------------------------   51 (104)
T ss_dssp             CCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEE------------------------------
T ss_pred             CCCCCCCCEEEEecCCEEEEEEEeccccCcceEEEEEEEeecccccceeE------------------------------
Confidence            678888999999999999999998875554 7899999998863221111                              


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCC-CCCccceEE
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL-GRLSGKVTV  306 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~-g~~s~~~~~  306 (427)
                      ..........+++.+|.|++.|.|+|+|+|..|. |++|.....
T Consensus        52 ~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G~~s~~S~~s~~   95 (104)
T d1bpva_          52 ANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDA   95 (104)
T ss_dssp             CCCSCCCSSEEEECSCCSSCCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred             EEeeccceeEEEEcCCCCCCEEEEEEEEEECCCCCCCCcCCCCC
Confidence            1123345678999999999999999999999996 666664443

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=4.5e-12  Score=97.60  Aligned_cols=101  Identities=19%  Similarity=0.288  Sum_probs=78.1

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE---eeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR---NTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      .+|.++++...+.++|.|+|+++  .+.++.+..|.++|+...........   ......+.+.+|.|++.|.|+|+|.|
T Consensus        18 ~~P~~~~v~~~~~~sv~l~W~~p--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n   95 (127)
T d1ueya_          18 NPPFDLELTDQLDKSVQLSWTPG--DDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVN   95 (127)
T ss_dssp             CCCEEEEEECCSSSCEEEEEECC--CCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCEEEECCCTTCEECCEEEEEE
T ss_pred             cCCCCcEEEEecCCeEEEEEeCC--cccccceEeeeeeeccccccceeEEEEeecCCceEEEECCCccCCEEEEEEEEEc
Confidence            57999999999999999999988  46667889999999876444333222   24467789999999999999999999


Q ss_pred             CCCCCCCCCCe-EEEccccc-CCCCCce
Q psy8774         167 KAGPGPWSPKL-SLMTARDM-VRAPLGV  192 (427)
Q Consensus       167 ~~g~~~~s~~~-~~~t~~~~-p~~p~~l  192 (427)
                      ..|.|.+|... .+++.... +.+|.++
T Consensus        96 ~~G~s~~S~~s~~~~t~~~~P~~~P~~~  123 (127)
T d1ueya_          96 SIGKSLPSEASEQYLTKASEPDKNPTSG  123 (127)
T ss_dssp             SSCBCCCCSCCCCEECCCSSCSSCSSCC
T ss_pred             CCcCcCCcCCcccEEcCCCCCCCCCCCC
Confidence            99999888664 35564443 4666554

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.6e-12  Score=93.35  Aligned_cols=83  Identities=23%  Similarity=0.237  Sum_probs=66.6

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.+|++..++.+++.|+|++|.   +.+.+|+|.|+.........                              ...
T Consensus         2 d~P~~l~v~~vt~~sv~l~W~~p~---~~~~~Y~i~~~~~~~~~~~~------------------------------~~~   48 (89)
T d1fnfa3           2 DSPTGIDFSDITANSFTVHWIAPR---ATITGYRIRHHPEHFSGRPR------------------------------EDR   48 (89)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECSCCSSCCE------------------------------EEE
T ss_pred             ccCcCCEEEEecCCEEEEEEEeCC---CEEeeEEEEEEECCCCCceE------------------------------EEE
Confidence            578999999999999999999986   67899999998763221111                              123


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                      .....+++.|.+|.|++.|.|+|+|++..|.|++..
T Consensus        49 v~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~~   84 (89)
T d1fnfa3          49 VPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI   84 (89)
T ss_dssp             EETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEE
T ss_pred             ECCCccEEEECCCcccCEEEEEEEEEcCCcCcCCEE
Confidence            346678999999999999999999999998766543

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=99.35  E-value=3.2e-12  Score=93.92  Aligned_cols=89  Identities=17%  Similarity=0.274  Sum_probs=69.0

Q ss_pred             CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEEE
Q psy8774          86 GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        86 ~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      ++| .+|.++.+.. ..+++.|+|+++  .+.++++.+|.|+|+............   ....++.+.+|.|++.|.|+|
T Consensus         4 dvP-~~P~~~~v~~-~~~sv~lsW~pp--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~frV   79 (100)
T d1cfba1           4 DVP-NAPKLTGITC-QADKAEIHWEQQ--GDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRV   79 (100)
T ss_dssp             CCC-CCCEEEEEEE-CSSEEEEEEECC--CCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEEECCSSEEEEEEE
T ss_pred             cCC-CcCcCcEEEE-cCCEEEEEEcCC--cccccceEEEEEEEecCCCCceeeEEeeecCCceEEEEecCCCCCEEEEEE
Confidence            344 5799999764 668999999988  456678999999999774443332222   336778999999999999999


Q ss_pred             EEeeCCCCCCCCCCeE
Q psy8774         163 QAITKAGPGPWSPKLS  178 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~~  178 (427)
                      +|.|..|.|.+|....
T Consensus        80 ~A~n~~G~g~~S~~s~   95 (100)
T d1cfba1          80 IAFNKIGASPPSAHSD   95 (100)
T ss_dssp             EEEETTEECCCCCCCC
T ss_pred             EEEeCCcCCCCcCCCc
Confidence            9999999998876543

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.35  E-value=1.4e-12  Score=97.17  Aligned_cols=98  Identities=17%  Similarity=0.194  Sum_probs=65.1

Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccc
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKS  267 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (427)
                      ||..+.+..++++++.|+|.+|...++.|.+|.|+|+.....  ..|....                ........+....
T Consensus         2 PP~~p~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~--~~~~~~~----------------~~~~~~~~~~~~~   63 (107)
T d2ic2a1           2 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKR--KNWQTTN----------------DNIPYGKPKWNSE   63 (107)
T ss_dssp             CCCCCEEEECC---EEEEEEEECCSSCCEEEEEEEEEECC-----CCEEEE----------------EEEECCSCSCSSS
T ss_pred             cCcCCEEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCC--CcceEEE----------------eeeeccceeeeec
Confidence            455567888899999999999987677999999999876321  1221000                0000011112233


Q ss_pred             cCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc
Q psy8774         268 VPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK  303 (427)
Q Consensus       268 ~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~  303 (427)
                      .....+++|.+|+|++.|.|+|+|.|..|.|.+|..
T Consensus        64 ~~~~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S~~   99 (107)
T d2ic2a1          64 LGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNT   99 (107)
T ss_dssp             SEEEEEEEECSCCSSEEEEEEEEEEETTSCEEECCC
T ss_pred             ccceeEEEECCCcCCcEEEEEEEEEcCCCCCCCCCC
Confidence            345568999999999999999999999999988753

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

Probab=99.35  E-value=6.9e-12  Score=89.54  Aligned_cols=84  Identities=25%  Similarity=0.332  Sum_probs=68.8

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      |.+|.+|.+...+.+++.|+|+++.  + ++.+.+|.|.+..      ........+++.+.+|.|++.|.|+|+|+|..
T Consensus         4 P~~P~~l~~~~~~~~sv~lsW~~p~--~-~~~i~~Y~i~~~~------~~~~~~~~t~~~~~~L~p~t~Y~~~V~A~n~~   74 (88)
T d1k85a_           4 PTAPTNLASTAQTTSSITLSWTAST--D-NVGVTGYDVYNGT------ALATTVTGTTATISGLAADTSYTFTVKAKDAA   74 (88)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECCS--C-CSSEEEEEEEESS------SEEEEESSSEEEECCCCSSCEEEEEEEEEETT
T ss_pred             cCCCCCcEEEEecCCEEEEEEeCCC--C-CCCEEEEEEEccc------eEEEecCCCEEEECCCCCCCEEEEEEEEEECC
Confidence            3679999999999999999999884  2 3468899997532      22334567899999999999999999999999


Q ss_pred             C-CCCCCCCeEEEc
Q psy8774         169 G-PGPWSPKLSLMT  181 (427)
Q Consensus       169 g-~~~~s~~~~~~t  181 (427)
                      | .|.+|..+.++|
T Consensus        75 G~~s~~S~~v~vtT   88 (88)
T d1k85a_          75 GNVSAASNAVSVKT   88 (88)
T ss_dssp             TEECCCCCCEEEEC
T ss_pred             CCcCCCCcCEEEEC
Confidence            9 588898888765

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.6e-12  Score=93.27  Aligned_cols=81  Identities=31%  Similarity=0.385  Sum_probs=64.6

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.+|++...+.+++.|+|++|.   +.+.+|.|+|+..+......                              ...
T Consensus         2 daP~nl~v~~~~~~s~~l~W~~p~---~~i~~Y~i~~~~~~~~~~~~------------------------------~~~   48 (89)
T d1fnha3           2 DAPSNLRFLATTPNSLLVSWQPPR---ARITGYIIKYEKPGSPPREV------------------------------VPR   48 (89)
T ss_dssp             CCCEEEEEEEEETTEEEEEEECCS---SCCSEEEEEEECTTSCCEEC------------------------------TTC
T ss_pred             ccCcCCEEEEecCCEEEEEEeCCC---cCCceEEEEEeeccCCccEE------------------------------EEE
Confidence            478999999999999999999886   78999999998763321111                              122


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCC
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRL  300 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~  300 (427)
                      .....+++.|.+|.|++.|.|+|+|++..|.|.+
T Consensus        49 ~~~~~~~~~~~~L~p~t~Y~~~V~a~n~~g~S~p   82 (89)
T d1fnha3          49 PRPGVTEATITGLEPGTEYTIYVIALKNNQKSEP   82 (89)
T ss_dssp             CCTTCCEEEEESCCTTCEEEEEEEEESSSCEEEE
T ss_pred             cCCCccEEEEEeeeCCCEEEEEEEEEcCCCEeCC
Confidence            3455678999999999999999999999876543

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.4e-12  Score=93.23  Aligned_cols=87  Identities=16%  Similarity=0.116  Sum_probs=70.8

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.++++...+.+++.|+|++|.   +.+.+|.|.|+..+.   ...                             ...
T Consensus         3 ~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~---~~~-----------------------------~~~   47 (93)
T d2cuma1           3 EAPRDLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGG---QTQ-----------------------------EIL   47 (93)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEECTTS---CEE-----------------------------EEE
T ss_pred             CcCCCCEEEEeCCCEEEEEEEccc---cccccEEEEEEcccc---ccE-----------------------------EEE
Confidence            578999999999999999999986   679999999987632   111                             223


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                      .....++++|.+|.|++.|.|+|+|++..|.|..+. ..++|.
T Consensus        48 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~-~~~tT~   89 (93)
T d2cuma1          48 LPGGITSHQLLGLFPSTSYNARLQAMWGQSLLPPVS-TSFTTG   89 (93)
T ss_dssp             ECSSCSEEEECSCCTTCEEEEEEEEEBTTBCCCCEE-EEEECC
T ss_pred             ECCCccEEEEeCccCCCEEEEEEEEEeCCCCCCCEE-EEEEeC
Confidence            446678999999999999999999999999888765 556663

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=9.5e-12  Score=91.48  Aligned_cols=91  Identities=13%  Similarity=0.140  Sum_probs=69.4

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe-----eeeeEEEEccCCCCcEEEEEEEE
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-----TTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      .+|..+.+ ....+++.|+|++|. .+.+.+|.+|.|+|+..+.........     ...+.+.|.+|.|++.|.|+|+|
T Consensus         4 ~~P~~~~~-~~~~~sv~l~W~~P~-~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A   81 (101)
T d2haza1           4 SSPSIDQV-EPYSSTAQVQFDEPE-ATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAA   81 (101)
T ss_dssp             CCCEEEEE-EECSSCEEEEEECCS-CCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEEE
T ss_pred             cCCccCEE-EeeCCEEEEEEeCCC-cCccccEEEEEEEEeecCCcceeeeeeeeecccceeEEEecCCCCCeEEEEEEEE
Confidence            45765554 457788999999884 233347999999999874333222211     22678999999999999999999


Q ss_pred             eeCCCCCCCCCCeEEEcc
Q psy8774         165 ITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~~t~  182 (427)
                      .|..|.|.+|....+.|.
T Consensus        82 ~N~~G~g~~S~~~~~~T~   99 (101)
T d2haza1          82 LNGKGLGEISAASEFKTQ   99 (101)
T ss_dssp             EETTEECCCCCCEEEECC
T ss_pred             EeCCcCcCCCCceeEEeC
Confidence            999999999999988873

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.1e-12  Score=91.96  Aligned_cols=87  Identities=14%  Similarity=0.205  Sum_probs=69.4

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      +||.+|++...+.+++.|+|++|.   +.+.+|.|.|+..++..  ..                             ...
T Consensus         3 spP~~l~v~~~~~~si~v~W~~p~---~~~~~Y~i~~~~~~~~~--~~-----------------------------~~~   48 (90)
T d1fnha2           3 SPPRRARVTDATETTITISWRTKT---ETITGFQVDAVPANGQT--PI-----------------------------QRT   48 (90)
T ss_dssp             CCCEEEEEEEECSSEEEEEEECCS---SCCCCEEEEEEESSSSC--CE-----------------------------EEE
T ss_pred             CcCCCCEEEEecCCEEEEEEECCC---CCCceeEEEEEEccCCc--eE-----------------------------EEe
Confidence            689999999999999999999886   78999999999763321  11                             223


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      .....+.+.|.+|+||+.|.|+|+|.+..|.|.... +.++|
T Consensus        49 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~~-~~~~T   89 (90)
T d1fnha2          49 IKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVV-IDAST   89 (90)
T ss_dssp             CCTTCSEEEEESCCTTCEEEEEEEEEETTEECCCEE-EEEEC
T ss_pred             cCCCccEEEeCCCCCCcEEEEEEEEEeCCCCcCCEE-EEEEC
Confidence            445678999999999999999999999998877544 44443

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.34  E-value=2.8e-12  Score=95.51  Aligned_cols=83  Identities=17%  Similarity=0.214  Sum_probs=61.2

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--------------eeeeEEEEccCCCCcE
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--------------TTQTKAVFSNLEEGIE  157 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--------------~~~~~~~i~~L~p~t~  157 (427)
                      |..+.+...+.++|.|+|.+|  .+.++.|.+|.|+|+.......+....              .....+.|.+|.|++.
T Consensus         3 P~~p~v~~~~~~sv~l~W~~P--~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~   80 (107)
T d2ic2a1           3 PTPPNVTRLSDESVMLRWMVP--RNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHT   80 (107)
T ss_dssp             CCCCEEEECC---EEEEEEEE--CCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEE
T ss_pred             CcCCEEEEEECCEEEEEEEeC--ccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcE
Confidence            445567888999999999998  456679999999998764333332221              3367899999999999


Q ss_pred             EEEEEEEeeCCCCCCCCCC
Q psy8774         158 YSAEVQAITKAGPGPWSPK  176 (427)
Q Consensus       158 Y~~~V~a~~~~g~~~~s~~  176 (427)
                      |.|+|+|.|..|.|.+|..
T Consensus        81 Y~frV~A~N~~G~s~~S~~   99 (107)
T d2ic2a1          81 YRFRILAVYSNNDNKESNT   99 (107)
T ss_dssp             EEEEEEEEETTSCEEECCC
T ss_pred             EEEEEEEEcCCCCCCCCCC
Confidence            9999999999999876644

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3e-12  Score=92.89  Aligned_cols=88  Identities=19%  Similarity=0.206  Sum_probs=69.0

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.+|++..++.+++.|+|++|.   +.+.+|.|.|......... .                             ...
T Consensus         3 d~P~~l~v~~vt~~sv~l~W~~p~---~~~~~y~i~~~~~~~~~~~-~-----------------------------~~~   49 (94)
T d1j8ka_           3 DRPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIHE-L-----------------------------FPA   49 (94)
T ss_dssp             CCCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEEE-E-----------------------------CCC
T ss_pred             CCCCCCEEEEecCCEEEEEEeCCC---ccccceEEEEEeecCCCce-E-----------------------------EEe
Confidence            578999999999999999999886   6789999999876332111 1                             223


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      .....++++|.+|.|++.|.|+|+|++..|.|.... ..+.|
T Consensus        50 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~S~p~~-~~~~T   90 (94)
T d1j8ka_          50 PDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLI-GTQST   90 (94)
T ss_dssp             CCSSCCEEEECSCCCCSEEEEEEEECSSSCCCCCEE-EEEEC
T ss_pred             cCCCccEEEECCCCCCCEEEEEEEEEeCCCCcCCEE-EEEEE
Confidence            345678999999999999999999999998877654 33344

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.34  E-value=3.8e-12  Score=92.09  Aligned_cols=89  Identities=17%  Similarity=0.174  Sum_probs=71.4

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      +.+|.++.+..++.+++.|+|++|.   +.+.+|.|.|+..+......                              ..
T Consensus         4 ~~~P~~l~v~~v~~~si~v~W~~p~---~~~~~y~i~~~~~~~~~~~~------------------------------~~   50 (93)
T d1tdqa1           4 IDGPTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGEGGKT------------------------------TF   50 (93)
T ss_dssp             SCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSSCCCE------------------------------EE
T ss_pred             CCcCCCCEEEEeCCCEEEEEEEccc---cCCCceEEEEEeccCcceee------------------------------EE
Confidence            4789999999999999999999876   78899999999874321111                              22


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      ......++++|.+|.|++.|.|+|+|++..|.|..+. ..++|
T Consensus        51 ~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~~~-~~~tT   92 (93)
T d1tdqa1          51 RLQPPLSQYSVQALRPGSRYEVSISAVRGTNESDASS-TQFTT   92 (93)
T ss_dssp             EECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC
T ss_pred             EeCCCceEEEEeCcccceEEEEEEEEEeCCCCcCCEE-EEEEC
Confidence            3445678999999999999999999999999887765 45554

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=6.4e-12  Score=93.02  Aligned_cols=96  Identities=16%  Similarity=0.190  Sum_probs=72.7

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCC--CceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGR--GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~--g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      +.+|.+|++..++.+++.|+|.+|....  .....|.|.+...........                             
T Consensus         3 l~pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~-----------------------------   53 (104)
T d2b5ib2           3 LMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAP-----------------------------   53 (104)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSC-----------------------------
T ss_pred             cCCCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeee-----------------------------
Confidence            5799999999999999999999987543  356788888876632211110                             


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCC----CCCccceEEeecC
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL----GRLSGKVTVKVKP  310 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~----g~~s~~~~~~t~~  310 (427)
                      .........++.|.+|+|++.|.|+|+|.+..|.    |.+|.++.++|.|
T Consensus        54 ~~~~~~~~~~~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P  104 (104)
T d2b5ib2          54 LLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP  104 (104)
T ss_dssp             CEEECSCCCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred             EEecCCCcEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence            1223446778999999999999999999998874    5667788888864

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.4e-12  Score=96.63  Aligned_cols=93  Identities=24%  Similarity=0.255  Sum_probs=71.0

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE--eeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--NTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      |+.+|.++.+...+.++|.|+|++|. ...+..+.+|.++++...........  ......+.+.+|.|++.|.|+|+|+
T Consensus         2 Pp~pP~~p~~~~~t~~sv~lsW~~P~-~~~g~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~   80 (104)
T d1bpva_           2 PIDPPGKPVPLNITRHTVTLKWAKPE-YTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAK   80 (104)
T ss_dssp             CCCCCCCCEEEEEETTEEEEECCCCS-CCTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEE
T ss_pred             CCCCCCCCEEEEecCCEEEEEEEecc-ccCcceEEEEEEEeecccccceeEEEeeccceeEEEEcCCCCCCEEEEEEEEE
Confidence            56778888888899999999999884 23344788999999987444333222  2457889999999999999999999


Q ss_pred             eCCCC-CCCCCCeEEEc
Q psy8774         166 TKAGP-GPWSPKLSLMT  181 (427)
Q Consensus       166 ~~~g~-~~~s~~~~~~t  181 (427)
                      |..|. |.+|......+
T Consensus        81 n~~G~~s~~S~~s~~vt   97 (104)
T d1bpva_          81 NAAGAISPPSEPSDAIT   97 (104)
T ss_dssp             CTTSCEEEEEEEEEEEC
T ss_pred             ECCCCCCCCcCCCCCEE
Confidence            99996 55565554444

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=7.6e-14  Score=103.16  Aligned_cols=96  Identities=20%  Similarity=0.249  Sum_probs=76.7

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      .++..|.++++..++.+++.|+|++|..++|.+.+|+|+|+.........+.                            
T Consensus         3 ~~~d~P~~v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~----------------------------   54 (102)
T d2dtge1           3 KADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCD----------------------------   54 (102)
T ss_dssp             CCCCCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCC----------------------------
T ss_pred             CCCCCCCCCEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeee----------------------------
Confidence            4567888888888899999999999988889999999999876432222210                            


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      ..........+.+.+|.+++ |.|+|+|.|..|.|++|.++.|.|
T Consensus        55 ~~~~~~~~~~~~~~~L~~~t-Y~~rV~A~n~~G~g~~S~~v~f~~   98 (102)
T d2dtge1          55 TRKHFALERGCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFYV   98 (102)
T ss_dssp             CSSSCCCTTCCCCCSCCSSE-ECCCCCEEETTBCCCCCCCCEECC
T ss_pred             eeecccceEEEEEeccceee-EEEEEEEEcCCccCCCCCCEEEEc
Confidence            11233456678999999975 999999999999999999999987

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.33  E-value=2.2e-12  Score=91.84  Aligned_cols=81  Identities=23%  Similarity=0.251  Sum_probs=67.0

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.++++...+.+++.|+|++|.   +.+.+|.|+|+..++.   ..                             ...
T Consensus         2 ~~P~nl~v~~~~~~s~~l~W~~p~---~~~~~Y~v~~~~~~~~---~~-----------------------------~~~   46 (86)
T d1tdqa3           2 DSPRDLMVTASSETSISLIWTKAS---GPIDHYRITFTPSSGI---SS-----------------------------EVT   46 (86)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCC---SCCSEEEEEEECSSSC---CE-----------------------------EEE
T ss_pred             ccCCCCEEEEecCCEEEEEEeCCC---CCccceEEEEeccccc---ce-----------------------------EEE
Confidence            579999999999999999999987   7899999999876321   11                             223


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                      .....+++.|.+|.|++.|.|+|+|.+..|.|.++.
T Consensus        47 ~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~p~~   82 (86)
T d1tdqa3          47 VPRDRTSYTLTDLEPGAEYIISITAERGRQQSLEST   82 (86)
T ss_dssp             EESSCSEEEECCCCTTCCEEEEEEEEETTEECCCEE
T ss_pred             eCCCccEEEECCCccccEEEEEEEEEcCCCEECCEE
Confidence            456678999999999999999999999998877654

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3.6e-12  Score=91.65  Aligned_cols=88  Identities=22%  Similarity=0.216  Sum_probs=70.4

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      ++|.+|++..++.+++.|+|++|.   +.+.+|.|+|..........                              ...
T Consensus         1 PpP~~l~~~~v~~~si~l~W~~p~---~~~~~~~i~~~~~~~~~~~~------------------------------~~~   47 (90)
T d1fnha1           1 PAPTDLKFTQVTPTSLSAQWTPPN---VQLTGYRVRVTPKEKTGPMK------------------------------EIN   47 (90)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSCSCCC------------------------------EEE
T ss_pred             CCCCCEEEEEecCCEEEEEEEccc---eeccceEEEEEeeeCCCceE------------------------------EEE
Confidence            368999999999999999999886   67899999998764322111                              223


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      .....++++|.+|.|++.|.|+|+|+|..|.|..+. ..+.|
T Consensus        48 ~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~~~-~~~~T   88 (90)
T d1fnha1          48 LAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQ-GVVTT   88 (90)
T ss_dssp             ECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC
T ss_pred             eCCCCeEEEEecccCceEEEEEEEEEeCCCCcCCEe-EEEEc
Confidence            445677899999999999999999999999998876 44555

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2.2e-12  Score=95.72  Aligned_cols=93  Identities=14%  Similarity=0.116  Sum_probs=64.6

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      ..|..+.+...+.++|.|+|.+|...++.+.+|.|.|+......  .+..                           ...
T Consensus         8 ~~P~~p~~~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~--~~~~---------------------------~~~   58 (105)
T d2d9qb2           8 TMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEA--SWAL---------------------------VGP   58 (105)
T ss_dssp             ECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCC--CCEE---------------------------EEE
T ss_pred             CCCCCCEeecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCcc--ceee---------------------------eec
Confidence            45666778888899999999999877788999999999763222  2200                           122


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc---ceEEee
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG---KVTVKV  308 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~---~~~~~t  308 (427)
                      .....+++.|.+|.|++.|.|+|+|.|..|.|.+|+   .+.++|
T Consensus        59 ~~~~~~~~~i~~L~p~t~Y~frVra~n~~g~G~~S~wS~~~~~~t  103 (105)
T d2d9qb2          59 LPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRT  103 (105)
T ss_dssp             ECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECC
T ss_pred             ccCCcceeEEecccCCeEEEEEEEEEeCCCCCCCcCCCCCEEEeC
Confidence            345567899999999999999999999999876554   555544

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3.1e-12  Score=92.69  Aligned_cols=85  Identities=20%  Similarity=0.180  Sum_probs=64.6

Q ss_pred             cCCCCCceEEEeeeC-cEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         185 MVRAPLGVKALATSD-QSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~-~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      |+.+|.+|++....+ +++.|+|++|.  ++.+.+|+|.|+..++......                             
T Consensus         1 P~~PP~~l~v~~~~~ts~i~v~W~~p~--~~~i~~Y~v~y~~~~~~~~~~~-----------------------------   49 (94)
T d1fnfa1           1 PLSPPTNLHLEANPDTGVLTVSWERST--TPDITGYRITTTPTNGQQGNSL-----------------------------   49 (94)
T ss_dssp             CCCCCEEEEEEECSSSSCEEEEEECCS--CSSCCEEEEEEEETTTCSSCCE-----------------------------
T ss_pred             CCCcCcCcEEEEecCCCEEEEEeeCCC--CCCeeEEEEEEEEecccCceEE-----------------------------
Confidence            357899999988765 46999999886  2368999999997643221111                             


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCC
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRL  300 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~  300 (427)
                      .....+..++++|.+|.|++.|.|+|.|++..|.|..
T Consensus        50 ~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~p   86 (94)
T d1fnfa1          50 EEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVP   86 (94)
T ss_dssp             EEEECTTCCEEECCCCCTTSCEEEEEEEEETTEECCC
T ss_pred             EEEeCCCccEEEECCCCCCCEEEEEEEEEcCCCEeCC
Confidence            2234456789999999999999999999999876643

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=2.4e-12  Score=96.02  Aligned_cols=76  Identities=21%  Similarity=0.382  Sum_probs=63.2

Q ss_pred             CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe--ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccc
Q psy8774           3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETV   78 (427)
Q Consensus         3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~   78 (427)
                      ..+++++|.|+|.+|.++++++.+|.|+|+..++..+....  ....+++++.+|.|++.|.|+|+|.|..|.|..+.
T Consensus        22 ~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~N~~G~s~~S~   99 (108)
T d1wf5a1          22 STVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSK   99 (108)
T ss_dssp             CSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCEEEESSCCTTCCEEEEESCCTTCEEEEEEEEEESSCEEEECC
T ss_pred             EeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCceEEeeeecCCccEEEECCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence            45778899999999988888999999999976654333333  55678899999999999999999999999887553

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=5.9e-12  Score=95.59  Aligned_cols=90  Identities=27%  Similarity=0.331  Sum_probs=69.6

Q ss_pred             eeCcEEEEEeeeCCCCCCceeEEEEEEEecccccc-cccccccccccccccceeEEeeeccccccccccccccCCCCcee
Q psy8774         197 TSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDL-DEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAE  275 (427)
Q Consensus       197 ~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (427)
                      ++.++|.|+|++|. +++.+.+|+|+|+....... ..|..                           ........++++
T Consensus        27 ~s~tsi~v~W~~p~-~~~~i~gY~v~y~~~~~~~~~~~~~~---------------------------~~v~~~~~~s~~   78 (120)
T d1ujta_          27 LTPTTVQVTWTVDR-QPQFIQGYRVMYRQTSGLQATSSWQN---------------------------LDAKVPTERSAV   78 (120)
T ss_dssp             CBTTEEEEEEEESS-CCSSCCEEEEEEEESSSSSTTTCCEE---------------------------EECCCTTCCEEE
T ss_pred             eCCCeEEEEecCCC-CCCcEEEEEEEeeecccCCCCcceEE---------------------------EEeccCceeEEE
Confidence            57899999999986 56789999999997743221 12200                           112335577899


Q ss_pred             ccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCC
Q psy8774         276 LTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVP  314 (427)
Q Consensus       276 l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P  314 (427)
                      |.+|+|++.|.|+|+|+|..|.|+.|..+.++|.+..+|
T Consensus        79 i~~L~p~t~Y~f~V~A~n~~G~G~~S~~~~~~T~e~~~P  117 (120)
T d1ujta_          79 LVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESGP  117 (120)
T ss_dssp             EESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSCCC
T ss_pred             ECCCCCCCEEEEEEEEEeCCcCcCCCCCEEEEeCCCCcC
Confidence            999999999999999999999999999999999765433

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5.1e-12  Score=91.84  Aligned_cols=79  Identities=19%  Similarity=0.277  Sum_probs=66.2

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe--ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      +.++++++|.|+|++|.  ++.+.+|+|+|+..++..+....  ....+++.|.+|.||+.|.|+|+|.+..|.|.++..
T Consensus        14 v~~~t~~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~~~   91 (95)
T d2fnba_          14 FVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTL   91 (95)
T ss_dssp             EECCCSSCEEEECCCCC--CSSCCEEEEEEEEETSCCEEEEEECCSSCSEEEECCCCTTSEEEEEEEEEETTEECCCCEE
T ss_pred             EEEEcCCEEEEEEEecC--CceEEeEEEEEEEeeccceEEEEEeCCCCeEEEEecccCCEEEEEEEEEEeCCcEeCCEEE
Confidence            45788999999999986  45789999999988776655443  677889999999999999999999999999877765


Q ss_pred             EEe
Q psy8774          80 YYT   82 (427)
Q Consensus        80 ~~~   82 (427)
                      ...
T Consensus        92 ~~~   94 (95)
T d2fnba_          92 TQQ   94 (95)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            544

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.31  E-value=5e-12  Score=89.96  Aligned_cols=79  Identities=18%  Similarity=0.294  Sum_probs=66.8

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGP  170 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~  170 (427)
                      +|.++++...+.+++.|+|++|.     +.+.+|.|+|+..++...........+++.|.+|.|++.|.|+|+|.+..|.
T Consensus         3 ~P~nl~v~~~~~~s~~l~W~~p~-----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~   77 (86)
T d1tdqa3           3 SPRDLMVTASSETSISLIWTKAS-----GPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQ   77 (86)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCC-----SCCSEEEEEEECSSSCCEEEEEESSCSEEEECCCCTTCCEEEEEEEEETTEE
T ss_pred             cCCCCEEEEecCCEEEEEEeCCC-----CCccceEEEEecccccceEEEeCCCccEEEECCCccccEEEEEEEEEcCCCE
Confidence            68999999999999999999984     5788999999987544444455567899999999999999999999998887


Q ss_pred             CCCC
Q psy8774         171 GPWS  174 (427)
Q Consensus       171 ~~~s  174 (427)
                      |.++
T Consensus        78 s~p~   81 (86)
T d1tdqa3          78 SLES   81 (86)
T ss_dssp             CCCE
T ss_pred             ECCE
Confidence            6443

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.31  E-value=4.7e-12  Score=90.52  Aligned_cols=81  Identities=15%  Similarity=0.181  Sum_probs=66.5

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      .+|.+|++..++.+++.|+|++|.   +.+.+|.|.|+..+.....                               ...
T Consensus         2 ~~P~~l~v~~v~~~s~~l~W~~~~---~~~~~Y~i~~~~~~~~~~~-------------------------------~~~   47 (88)
T d1qr4a2           2 GSPKGISFSDITENSATVSWTPPR---SRVDSYRVSYVPITGGTPN-------------------------------VVT   47 (88)
T ss_dssp             CCCSCEEEESCCSSCEEEEECCCS---SCCSEEEEEEEETTCCCCE-------------------------------EEE
T ss_pred             cCCcceEEEEecCCEEEEEEEccc---EeeceEEEEEEeccCCceE-------------------------------EEE
Confidence            479999999999999999999886   7899999999987432111                               222


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCc
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS  301 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s  301 (427)
                      .....++++|.+|.|++.|.|+|.|++..|.|.+.
T Consensus        48 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~   82 (88)
T d1qr4a2          48 VDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPI   82 (88)
T ss_dssp             EETTCCEEEECSCCSSCEEEEEEEEEETTEECCCE
T ss_pred             ecCCccEEEECCCCCCCEEEEEEEEEeCCCCcCCE
Confidence            34567799999999999999999999999877654

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=2.9e-12  Score=95.61  Aligned_cols=93  Identities=19%  Similarity=0.249  Sum_probs=73.4

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE--eeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR--NTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      ++.||+++.+. .+.++|.|+|++|  ...++.+.+|.|+|+...........  ....+.+.|.+|.|++.|.|+|+|+
T Consensus         7 ~~sPP~~~~~~-~t~~si~l~W~pp--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~   83 (108)
T d1v5ja_           7 GLSPPRGLVAV-RTPRGVLLHWDPP--ELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAF   83 (108)
T ss_dssp             CCCCCEEEEEE-ECSSSEEEEEECC--SCCSSCCCBEEEEEEETTCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEEE
T ss_pred             CCCcCCCeEEE-EcCCEEEEEEEec--ccCCCceeEEEEEeeeeeeeeeeccccccceeeeEEEEeccCCcEEEEEEEEE
Confidence            44579999765 4778999999988  35567899999999987332222222  2357889999999999999999999


Q ss_pred             eCCCCCCCCCCeEEEccc
Q psy8774         166 TKAGPGPWSPKLSLMTAR  183 (427)
Q Consensus       166 ~~~g~~~~s~~~~~~t~~  183 (427)
                      |..|.|.+|..+.++|..
T Consensus        84 n~~g~s~~S~~~~~~T~~  101 (108)
T d1v5ja_          84 AGSFVSDPSNTANVSTSG  101 (108)
T ss_dssp             ETTEEEEECSCCCCCCSS
T ss_pred             eCCCEeCCcCceEEECCC
Confidence            999999889888888743

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.31  E-value=7.9e-12  Score=89.15  Aligned_cols=78  Identities=15%  Similarity=0.284  Sum_probs=65.0

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGP  170 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~  170 (427)
                      +|.+|++...+.+++.|+|++|.     +.+.+|.|.|+...............+++.|.+|.|++.|.|+|.|.+..|.
T Consensus         2 aP~~l~v~~~t~~sv~v~W~~p~-----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~   76 (87)
T d1qr4a1           2 NPKDLEVSDPTETTLSLRWRRPV-----AKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRHK   76 (87)
T ss_dssp             CCEEEEEESCCSSEEEEEEECCS-----SCCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESSSCB
T ss_pred             cCcCcEEEEecCCEEEEEEECCC-----CCcceeEEEeecCCcceeEEeCCCCcCEEEECCCCcCCEEEEEEEEEcCCCC
Confidence            58899999999999999999884     5688999999987433333344456899999999999999999999998887


Q ss_pred             CCC
Q psy8774         171 GPW  173 (427)
Q Consensus       171 ~~~  173 (427)
                      |.+
T Consensus        77 s~~   79 (87)
T d1qr4a1          77 SKP   79 (87)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            743

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.31  E-value=1.4e-11  Score=88.90  Aligned_cols=85  Identities=18%  Similarity=0.241  Sum_probs=67.6

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      +|.++++...+.+++.|+|++|.     +.+.+|.|+|+...+.......    ....+++.|.+|.|++.|.|+|+|.+
T Consensus         3 aP~~l~v~~~~~~sv~v~W~~p~-----~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~   77 (92)
T d1tdqa2           3 APKNLRVGSRTATSLDLEWDNSE-----AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVM   77 (92)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEE
T ss_pred             cCcCCEEEEecCCEEEEEEEecC-----CcccceEEEEEEcCCCcceeeEEEecCCCeeEEEECCccCCCEEEEEEEEEe
Confidence            68999999999999999999884     5788999999987544433222    13478899999999999999999999


Q ss_pred             CCCCCCCCCCeEEEc
Q psy8774         167 KAGPGPWSPKLSLMT  181 (427)
Q Consensus       167 ~~g~~~~s~~~~~~t  181 (427)
                      ..|.|.++ .+.++|
T Consensus        78 ~~g~s~p~-~~~~~T   91 (92)
T d1tdqa2          78 NSKQSIPA-TMNART   91 (92)
T ss_dssp             TTEECCCE-EEEEEC
T ss_pred             CCCEecCE-EEEEEC
Confidence            99988543 444444

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5.4e-12  Score=90.91  Aligned_cols=82  Identities=20%  Similarity=0.236  Sum_probs=65.5

Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccc
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKS  267 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (427)
                      +|.+|++...+.+++.|+|++|.  ++.+.+|.|+|+..+......                              ....
T Consensus         3 pP~~l~~~~~~~~sv~l~W~~p~--~~~~~~y~v~y~~~~~~~~~~------------------------------~~~~   50 (91)
T d1fnfa2           3 PPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDVA------------------------------ELSI   50 (91)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCTTCCE------------------------------EEEE
T ss_pred             cCCceEEEEeCCCEEEEEEEecC--CCCcceeEEEEEECCCCccEE------------------------------EEEe
Confidence            78999999999999999999875  457899999998764321111                              1233


Q ss_pred             cCCCCceeccCCCCCCeEEEEEEEEeccCCCCCc
Q psy8774         268 VPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS  301 (427)
Q Consensus       268 ~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s  301 (427)
                      ....++++|.+|.|++.|.|+|+|++..|.|...
T Consensus        51 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~S~p~   84 (91)
T d1fnfa2          51 SPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL   84 (91)
T ss_dssp             CTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred             CCCceEEEEeceeCCCEEEEEEEEEcCCCCCCCE
Confidence            4567899999999999999999999999876643

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.31  E-value=3.2e-11  Score=88.92  Aligned_cols=93  Identities=20%  Similarity=0.335  Sum_probs=70.7

Q ss_pred             CCCCeeeEEE----eecCCEEEEEeeCCCCCC--CCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEE
Q psy8774          89 TGPPANISHH----FQTPDVVCITWDPPLRTH--RNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        89 ~~~p~~~~~~----~~~~~~v~v~W~~p~~~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      +.||.++.+.    ....+.|.|+|++|...+  .++.+.+|.|+|+..+............+.+.|.+|.+++.|.|+|
T Consensus         3 P~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV   82 (103)
T d1f6fb2           3 PEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTGHQTQFKVFDLYPGQKYLVQT   82 (103)
T ss_dssp             CCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEEETCSEEEECCCCTTCEEEEEE
T ss_pred             CCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeecccceeEEEeCCCCcceEEEEEE
Confidence            3578888775    345678999999996432  2346779999999874433333334568899999999999999999


Q ss_pred             EEeeCCCC-CCCCCCeEEEc
Q psy8774         163 QAITKAGP-GPWSPKLSLMT  181 (427)
Q Consensus       163 ~a~~~~g~-~~~s~~~~~~t  181 (427)
                      +|.+..|. |.+|....+.+
T Consensus        83 ra~~~~G~wS~wS~~~~~~~  102 (103)
T d1f6fb2          83 RCKPDHGYWSRWSQESSVEM  102 (103)
T ss_dssp             EEEESSSCCCCCCCCEEEEC
T ss_pred             EEEeCCCCCCCCcCceeeEC
Confidence            99999996 88898888765

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.30  E-value=1e-11  Score=91.64  Aligned_cols=92  Identities=16%  Similarity=0.198  Sum_probs=70.5

Q ss_pred             cCCCCCceEEE----eeeCcEEEEEeeeCCCC----CCceeEEEEEEEecccccccccccccccccccccceeEEeeecc
Q psy8774         185 MVRAPLGVKAL----ATSDQSVEVWWKPVPAG----RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTA  256 (427)
Q Consensus       185 ~p~~p~~l~~~----~~~~~si~v~W~~p~~~----~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (427)
                      .|.+|.++.+.    ....++|.|+|++|...    ++.+.+|+|+|+..+   ...+                      
T Consensus         2 kP~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~---~~~~----------------------   56 (103)
T d1f6fb2           2 EPEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEE---AEEW----------------------   56 (103)
T ss_dssp             CCCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESS---CSCC----------------------
T ss_pred             CCCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCC---Ccce----------------------
Confidence            36889998875    33567899999999642    246789999998873   2333                      


Q ss_pred             ccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC-CCCccceEEee
Q psy8774         257 VEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL-GRLSGKVTVKV  308 (427)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~-g~~s~~~~~~t  308 (427)
                             ........+++.|.+|.+++.|.|+|+|.+..|. |.+|..+.+.+
T Consensus        57 -------~~~~~~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~  102 (103)
T d1f6fb2          57 -------EIHFTGHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEM  102 (103)
T ss_dssp             -------EEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred             -------eeecccceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeEC
Confidence                   2233445678999999999999999999999994 99999887765

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=4.1e-12  Score=93.56  Aligned_cols=99  Identities=13%  Similarity=0.107  Sum_probs=72.8

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      +.|++|.+|++..++.+++.|+|++|.   +.+.+|.|.|+.............                      ...+
T Consensus         2 g~Pp~~~~l~v~~~t~~sv~v~W~pp~---~~~~~y~i~~~~~~~~~~~~~~~~----------------------~~~~   56 (101)
T d2cuia1           2 GSRPRLSQLSVTDVTTSSLRLNWEAPP---GAFDSFLLRFGVPSPSTLEPHPRP----------------------LLQR   56 (101)
T ss_dssp             CCCCCCCCCEEESCCSSCEEEECCCCT---TSCSEEEEEEECCCCSSSCCCSSC----------------------CCCE
T ss_pred             CCccCCCCcEEEEECCCEEEEEEEecc---ccccceEEEEEecCCCceeeccCC----------------------ccee
Confidence            356789999999999999999999876   789999999988743222211000                      0001


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      .....+...+++|.+|+|++.|.|+|+|++..|.|..+. ..++|
T Consensus        57 ~~~~~~~~~~~~v~~L~p~t~Y~~~V~a~~~~g~g~~~~-~~~~T  100 (101)
T d2cuia1          57 ELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQ-GTART  100 (101)
T ss_dssp             EEEEETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEEE-EEEEC
T ss_pred             EeecccceeEEEeCCCCcCCEEEEEEEEEeCCcEeCCeE-EEeEE
Confidence            223456778999999999999999999999999887654 34443

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=9.1e-12  Score=94.78  Aligned_cols=96  Identities=18%  Similarity=0.185  Sum_probs=71.6

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEcc---CCCceE-EEeeeeeEEEEccCCCCcEEEEEE
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI---DANNVI-HRNTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~---~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      .|+.+|..+.+..++.++|.|+|++|.. +.+..+.+|.|+|+...   ....+. ......+++.|.+|.|++.|.|+|
T Consensus        14 ~pp~~P~~p~v~~vt~~sv~l~W~~P~~-~~g~~i~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV   92 (120)
T d1wfua_          14 VPLSKPHPPVVGKVTHHSIELYWDLEQK-EKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRL   92 (120)
T ss_dssp             CCCCCCCCCBCCCEETTEEEEECTTTSC-SCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEE
T ss_pred             cCCCcCCCCEEeEecCCEEEEEEECCcc-cCcccccceeeeeeeecccccccceeeeccccccEEeCCCCCCCcEeeEEE
Confidence            4556677777888899999999998852 22335667777665321   122222 233457899999999999999999


Q ss_pred             EEeeCCCCCCCCCCeEEEccc
Q psy8774         163 QAITKAGPGPWSPKLSLMTAR  183 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~~~~t~~  183 (427)
                      +|.|..|.|.+|+.+.+.|..
T Consensus        93 ~A~n~~G~s~~S~~~~~~T~~  113 (120)
T d1wfua_          93 KVTSPSGEYEYSPVVSVATTR  113 (120)
T ss_dssp             EEECSSSCEEECCCEEEECCC
T ss_pred             EEEeCCcEeCCCCCEEEEeCC
Confidence            999999999999999998854

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6.1e-12  Score=90.43  Aligned_cols=88  Identities=13%  Similarity=0.095  Sum_probs=67.7

Q ss_pred             CCCceEEEeeeC--cEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         188 APLGVKALATSD--QSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       188 ~p~~l~~~~~~~--~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      +|.++.+.....  +++.|+|++|.  .+.+.+|+|+|+..++.....                              ..
T Consensus         2 aP~~~~vt~~~~~~~s~~vsW~~P~--~~~i~~Y~i~y~~~~~~~~~~------------------------------~~   49 (93)
T d1owwa_           2 GPVEVFITETPSQPNSHPIQWNAPQ--PSHISKYILRWRPKNSVGRWK------------------------------EA   49 (93)
T ss_dssp             CCCEEECCCCSSCTTCEEEEEECCS--SSCEEEEEEEEEETTCSSCCE------------------------------EE
T ss_pred             cCcccEEEEccCCCCEEEEEeeccc--ccceeEEEEEEeeccccceee------------------------------ee
Confidence            567777766544  79999999985  357999999999864322111                              12


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV  308 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t  308 (427)
                      ...+..++++|.+|+|++.|.|+|.|+|..|.|..+. ..|+|
T Consensus        50 ~v~~~~~~~~l~gL~P~t~Y~v~v~av~~~G~s~~~~-~~~tT   91 (93)
T d1owwa_          50 TIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTR-FDFTT   91 (93)
T ss_dssp             EECSSCCEEEECSCCSSEEEEEEEEEEESSSCEEEEE-EEEEE
T ss_pred             ccCCCccEEEECCcccCcEEEEEEEEEeCCCccCcEE-EEEEe
Confidence            3456778999999999999999999999999988776 66666

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=3.9e-11  Score=88.63  Aligned_cols=94  Identities=22%  Similarity=0.384  Sum_probs=68.5

Q ss_pred             CCCCeeeEEE----eecCCEEEEEeeCCCCCC--CCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEE
Q psy8774          89 TGPPANISHH----FQTPDVVCITWDPPLRTH--RNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        89 ~~~p~~~~~~----~~~~~~v~v~W~~p~~~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      +.||.++.+.    ..+.+.+.|+|++|...+  ..+.+..|.++++..+............+.+.|.+|.+++.|.|+|
T Consensus         3 P~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV   82 (104)
T d3d48r2           3 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQV   82 (104)
T ss_dssp             CCCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEEEETCSEEEECC--CCCEEEEEE
T ss_pred             CcCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeeccccccEEEECCCCCCCEEEEEE
Confidence            4578888875    345678999999986322  2345678999998874433333444568889999999999999999


Q ss_pred             EEeeCCCC-CCCCCCeEEEcc
Q psy8774         163 QAITKAGP-GPWSPKLSLMTA  182 (427)
Q Consensus       163 ~a~~~~g~-~~~s~~~~~~t~  182 (427)
                      +|.|..|. |.+|+.+.++++
T Consensus        83 rA~n~~G~ws~wS~~~~v~tP  103 (104)
T d3d48r2          83 RCKPDHGYWSAWSPATFIQIP  103 (104)
T ss_dssp             EEEESSSCCCCCCCCEEEECC
T ss_pred             EEEeCCCCCCCCcCCEEEECc
Confidence            99999997 899999998863

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.1e-11  Score=89.14  Aligned_cols=76  Identities=20%  Similarity=0.268  Sum_probs=63.4

Q ss_pred             cceEEEEEeeCCCCCCCcceEeEEEEEEecCcc-ceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeC
Q psy8774           6 PEVTIELVWSQPTQTYGEILGYRVKYGVREHTL-KENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTT   83 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~-~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t   83 (427)
                      +++++.|+|++|.  .+.+.+|+|+|+..++.. |.... +...++++|.+|.||+.|.|+|.|++..|.+..+...+.|
T Consensus        14 ~~~s~~vsW~~P~--~~~i~~Y~i~y~~~~~~~~~~~~~v~~~~~~~~l~gL~P~t~Y~v~v~av~~~G~s~~~~~~~tT   91 (93)
T d1owwa_          14 QPNSHPIQWNAPQ--PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT   91 (93)
T ss_dssp             CTTCEEEEEECCS--SSCEEEEEEEEEETTCSSCCEEEEECSSCCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred             CCCEEEEEeeccc--ccceeEEEEEEeeccccceeeeeccCCCccEEEECCcccCcEEEEEEEEEeCCCccCcEEEEEEe
Confidence            4579999999985  458999999999876554 44343 7788999999999999999999999999999877766665

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=5.7e-12  Score=96.39  Aligned_cols=95  Identities=18%  Similarity=0.276  Sum_probs=72.6

Q ss_pred             CCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce------EE-----------EeeeeeE
Q psy8774          84 PEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV------IH-----------RNTTQTK  146 (427)
Q Consensus        84 ~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~------~~-----------~~~~~~~  146 (427)
                      ...+| .+|.++++.. +.+++.|+|++|  .+.+|.|.+|.|+|+........      ..           .......
T Consensus         4 ~~~~P-~aP~~v~v~~-~~~si~l~W~~P--~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (123)
T d1wfta_           4 GSSGP-GAPSTVRISK-NVDGIHLSWEPP--TSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLA   79 (123)
T ss_dssp             SSSCC-CCCEEEEEEE-CSSEEEEEEECC--SSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHT
T ss_pred             CCCCC-cCCcccEEEe-CCCEEEEEecCc--hhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccE
Confidence            34445 5799999865 678999999998  46678999999999876433211      00           1122455


Q ss_pred             EEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         147 AVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       147 ~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      +.|.+|.|++.|.|+|+|.|..|.|++|+...+++.
T Consensus        80 ~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~  115 (123)
T d1wfta_          80 NAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGN  115 (123)
T ss_dssp             TCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCS
T ss_pred             EEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEec
Confidence            678899999999999999999999999988888873

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=6.3e-12  Score=94.30  Aligned_cols=95  Identities=19%  Similarity=0.276  Sum_probs=73.3

Q ss_pred             CCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce--E---EE--eeeeeEEEEccCCCCc
Q psy8774          84 PEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--I---HR--NTTQTKAVFSNLEEGI  156 (427)
Q Consensus        84 ~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~--~---~~--~~~~~~~~i~~L~p~t  156 (427)
                      ++++| ++|.++++...+.+++.|+|+++  .+.++.+.+|.|+++........  .   ..  ....+++.|.+|.|++
T Consensus         7 p~~~P-~~P~~~~~~~~~~~sv~l~W~pp--~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t   83 (111)
T d1wisa1           7 PPELP-GPPTNLGISNIGPRSVTLQFRPG--YDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFT   83 (111)
T ss_dssp             CCCCC-CCCEEEEEESCCSSCEEEEEECC--CCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTS
T ss_pred             CCCCC-cCCCCCEEEEcCCCEEEEEEeCC--CCCCCceeEEEEeeeecccCCCcceeeeeeeecccceeEEEeCCCCCCC
Confidence            34444 67999999999999999999988  46678899999999865333221  1   11  1337889999999999


Q ss_pred             EEEEEEEEeeCCCCCCCCCCe-EEEc
Q psy8774         157 EYSAEVQAITKAGPGPWSPKL-SLMT  181 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~~~-~~~t  181 (427)
                      .|.|+|+|.|..|.|.+|.+. .++|
T Consensus        84 ~Y~frV~A~N~~G~s~~S~~s~~~~T  109 (111)
T d1wisa1          84 CYSFRMRQVNIVGTSPPSQPSRKIQT  109 (111)
T ss_dssp             EECCCCEEECSSCBCCCCCCCCCEEC
T ss_pred             EEEEEEEEEcCCcCCCCcCCCCCEEc
Confidence            999999999999999887653 3444

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.3e-12  Score=102.17  Aligned_cols=99  Identities=15%  Similarity=0.166  Sum_probs=74.7

Q ss_pred             EcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCC---------ceeEEEEEEEecccccccccccccccccccccceeE
Q psy8774         180 MTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRG---------KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI  250 (427)
Q Consensus       180 ~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g---------~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (427)
                      ++....|..+....+..++.+++.|+|++|...++         .+..|.|.+.....  ...+                
T Consensus        12 ~~~~~~~~~~~~P~V~~v~~~sv~l~W~~P~~~~~~~~~~~~~~~~~~y~v~~~~~~~--~~~~----------------   73 (137)
T d1wk0a_          12 KAFEALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGK--DGKY----------------   73 (137)
T ss_dssp             HHHHHHTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCT--TSCC----------------
T ss_pred             EEeccCCCCCCCCEEEEeEcCEEEEEEeCcCcCCCceeeccccceEEeeEEEEeeCCC--CccE----------------
Confidence            33344556667778999999999999999875432         45678887765421  1111                


Q ss_pred             EeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                                   ........++++|.+|+|++.|.|+|+|.|..|.|.+|..+.++|.
T Consensus        74 -------------~~~~~~~~~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~  119 (137)
T d1wk0a_          74 -------------KSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTL  119 (137)
T ss_dssp             -------------EEEEEESCSEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECC
T ss_pred             -------------EEEEecCccEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECC
Confidence                         2234456778999999999999999999999999999999999984

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2.2e-11  Score=87.33  Aligned_cols=78  Identities=13%  Similarity=0.232  Sum_probs=64.6

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-eeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-NTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      .||.++++...+.+++.|+|++|.     +.+.+|.|+|+..++....... ......+.|.+|.||+.|.|+|+|.+..
T Consensus         3 spP~~l~v~~~~~~si~v~W~~p~-----~~~~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   77 (90)
T d1fnha2           3 SPPRRARVTDATETTITISWRTKT-----ETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDN   77 (90)
T ss_dssp             CCCEEEEEEEECSSEEEEEEECCS-----SCCCCEEEEEEESSSSCCEEEECCTTCSEEEEESCCTTCEEEEEEEEEETT
T ss_pred             CcCCCCEEEEecCCEEEEEEECCC-----CCCceeEEEEEEccCCceEEEecCCCccEEEeCCCCCCcEEEEEEEEEeCC
Confidence            469999999999999999999874     5788999999987443333222 2458999999999999999999999998


Q ss_pred             CCCC
Q psy8774         169 GPGP  172 (427)
Q Consensus       169 g~~~  172 (427)
                      |.|.
T Consensus        78 g~s~   81 (90)
T d1fnha2          78 ARSS   81 (90)
T ss_dssp             EECC
T ss_pred             CCcC
Confidence            8874

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.4e-11  Score=88.99  Aligned_cols=85  Identities=22%  Similarity=0.222  Sum_probs=67.9

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGP  170 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~  170 (427)
                      +|.++.+...+.+++.|+|++|.     +.+.+|.|.|+..+............+++.|.+|.|++.|.|+|+|.+..|.
T Consensus         4 ~P~~l~~~~~~~~sv~l~W~~p~-----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~   78 (93)
T d2cuma1           4 APRDLEAKEVTPRTALLTWTEPP-----VRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQSL   78 (93)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEECTTSCEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBTTBC
T ss_pred             cCCCCEEEEeCCCEEEEEEEccc-----cccccEEEEEEccccccEEEEECCCccEEEEeCccCCCEEEEEEEEEeCCCC
Confidence            68899999999999999999884     5688999999887432222333456889999999999999999999999888


Q ss_pred             CCCCCCeEEEc
Q psy8774         171 GPWSPKLSLMT  181 (427)
Q Consensus       171 ~~~s~~~~~~t  181 (427)
                      |..+ ...++|
T Consensus        79 s~~~-~~~~tT   88 (93)
T d2cuma1          79 LPPV-STSFTT   88 (93)
T ss_dssp             CCCE-EEEEEC
T ss_pred             CCCE-EEEEEe
Confidence            7543 344555

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1e-11  Score=89.03  Aligned_cols=77  Identities=19%  Similarity=0.256  Sum_probs=63.7

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe--ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      ++++++++|.|+|++|   .+.+.+|+|+|+..++..+....  ....+++.|.+|.|++.|.|+|+|.+..|.|++...
T Consensus         9 v~~vt~~sv~l~W~~p---~~~~~~Y~i~~~~~~~~~~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~~~   85 (89)
T d1fnfa3           9 FSDITANSFTVHWIAP---RATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIG   85 (89)
T ss_dssp             EESCCSSEEEEEEECC---SSCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred             EEEecCCEEEEEEEeC---CCEEeeEEEEEEECCCCCceEEEEECCCccEEEECCCcccCEEEEEEEEEcCCcCcCCEEE
Confidence            5678999999999998   45789999999987766554333  778899999999999999999999999998876544


Q ss_pred             EE
Q psy8774          80 YY   81 (427)
Q Consensus        80 ~~   81 (427)
                      ..
T Consensus        86 ~~   87 (89)
T d1fnfa3          86 QQ   87 (89)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.4e-11  Score=88.71  Aligned_cols=80  Identities=19%  Similarity=0.198  Sum_probs=64.8

Q ss_pred             CceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccC
Q psy8774         190 LGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVP  269 (427)
Q Consensus       190 ~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (427)
                      +||++..++.+++.|+|++|.   +.+.+|+|+|...+......                              .....+
T Consensus         1 rnl~v~~~t~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~~~~------------------------------~~~~~~   47 (91)
T d1fnaa_           1 RDLEVVAATPTSLLISWDAPA---VTVRYYRITYGETGGNSPVQ------------------------------EFTVPG   47 (91)
T ss_dssp             CCCEEEEECSSCEEEECCCCS---SCCSEEEEEEEETTCCSCCE------------------------------EEEEET
T ss_pred             CCCEEEEeCCCEEEEEEEccc---eEecEEEEEEEcCCCCceeE------------------------------EEEeCC
Confidence            478999999999999999886   67899999998863221111                              123456


Q ss_pred             CCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         270 LTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       270 ~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                      ..++++|.+|.|++.|.|+|.|++..|.|+.+.
T Consensus        48 ~~t~~~l~~L~p~t~Y~~~V~a~~~~g~s~~~s   80 (91)
T d1fnaa_          48 SKSTATISGLKPGVDYTITVYAVTGRGDSPASS   80 (91)
T ss_dssp             TCCEEEECSCCTTCEEEEEEEEECTTCCSSCSC
T ss_pred             CccEEEeCCCCCCCEEEEEEEEEeCCccCCCcC
Confidence            778999999999999999999999999887654

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.28  E-value=9.5e-12  Score=88.88  Aligned_cols=78  Identities=15%  Similarity=0.264  Sum_probs=65.9

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceE
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRY   80 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~   80 (427)
                      +.+++++++.|+|++|   .+++.+|.|+|+..+...+.... ....+++.+.+|.|++.|.|+|.|++..|.|.+....
T Consensus         9 v~~v~~~s~~l~W~~~---~~~~~~Y~i~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~p~~~~   85 (88)
T d1qr4a2           9 FSDITENSATVSWTPP---RSRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPISGI   85 (88)
T ss_dssp             EESCCSSCEEEEECCC---SSCCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEE
T ss_pred             EEEecCCEEEEEEEcc---cEeeceEEEEEEeccCCceEEEEecCCccEEEECCCCCCCEEEEEEEEEeCCCCcCCEEEE
Confidence            4678899999999998   46789999999988776665554 7788999999999999999999999999998765544


Q ss_pred             Ee
Q psy8774          81 YT   82 (427)
Q Consensus        81 ~~   82 (427)
                      +.
T Consensus        86 ~~   87 (88)
T d1qr4a2          86 LK   87 (88)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.28  E-value=7e-12  Score=93.05  Aligned_cols=88  Identities=14%  Similarity=0.138  Sum_probs=62.3

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      ..|..+.+...+.++|.|+|++|...++.+.+|.|+|+.....  ..|..                           ...
T Consensus         9 ~~P~~p~~~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~--~~w~~---------------------------v~~   59 (106)
T d1cd9b2           9 ALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKG--ANWTL---------------------------VFH   59 (106)
T ss_dssp             ECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTT--CCCEE---------------------------EEE
T ss_pred             CCCCCCeEecCCCCEEEEEEcCcccCCccceEEEEEEeecccc--cccee---------------------------eec
Confidence            4566667778889999999999987778899999999976322  22210                           112


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK  303 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~  303 (427)
                      .....+++.|.+|.|++.|.|+|+|.+..|.|.+|+.
T Consensus        60 ~~~~~~~~~l~~L~p~t~Y~frVra~~~~g~g~wS~w   96 (106)
T d1cd9b2          60 LPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPW   96 (106)
T ss_dssp             EESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCC
T ss_pred             ccCCceEEEEeccCCCeEEEEEEEEEeCCCCCCCcCC
Confidence            3345678999999999999999999999998776653

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2.4e-11  Score=87.17  Aligned_cols=80  Identities=18%  Similarity=0.183  Sum_probs=66.0

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      .+|.++++...+.+++.|+|++|.     +.+.+|.|.|...+......  ....+.+++.|.+|.|++.|.|+|+|.+.
T Consensus         3 d~P~~l~v~~~s~~s~~l~W~~p~-----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   77 (90)
T d1tena_           3 DAPSQIEVKDVTDTTALITWFKPL-----AEIDGIELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG   77 (90)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEETTCTTCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCCcEEEEecCCEEEEEEEeCc-----eEeccEEEEEEEcCCCceeEEEEecCCcceeeEeeecCCCEEEEEEEEEeC
Confidence            368999999999999999999874     57889999999875433333  23356899999999999999999999999


Q ss_pred             CCCCCCC
Q psy8774         168 AGPGPWS  174 (427)
Q Consensus       168 ~g~~~~s  174 (427)
                      .|.|.++
T Consensus        78 ~g~s~~~   84 (90)
T d1tena_          78 DMSSNPA   84 (90)
T ss_dssp             TEECCCE
T ss_pred             CCEeCCE
Confidence            8887543

>d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor common gamma chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.7e-11  Score=88.88  Aligned_cols=78  Identities=19%  Similarity=0.242  Sum_probs=63.1

Q ss_pred             cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccc
Q psy8774         185 MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWS  264 (427)
Q Consensus       185 ~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (427)
                      .|.+|.+|++...+.+++.|+|++|.  .+.+..|+|+|+..+.   ..+                             .
T Consensus         2 ~P~~P~nl~v~~~~~~~v~l~W~~p~--~~~~~~y~v~y~~~~~---~~~-----------------------------~   47 (95)
T d2b5ic1           2 IPWAPENLTLHKLSESQLELNWNNRF--LNHCLEHLVQYRTDWD---HSW-----------------------------T   47 (95)
T ss_dssp             ECCCCEEEEEEEEETTEEEEEEECSS--CSTTCEEEEEEEETTC---SSC-----------------------------E
T ss_pred             CCcCCCCCEEEEEeCCEEEEEECCCC--CceeEEEEEEEEcCCC---cee-----------------------------e
Confidence            37899999999999999999999886  3567889999998732   233                             3


Q ss_pred             ccccCCCCceeccCCCCCCeEEEEEEEEeccC
Q psy8774         265 QKSVPLTESAELTSLEKFTEYAVAVAARTVNG  296 (427)
Q Consensus       265 ~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G  296 (427)
                      .......++++|.+|.|++.|.|+|+|.+..+
T Consensus        48 ~~~~~~~~~~~~~~L~p~t~Y~frVRa~~~~~   79 (95)
T d2b5ic1          48 EQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPL   79 (95)
T ss_dssp             EEEECSSCEEEECSCCTTSCEEEEEEEECCSS
T ss_pred             EeeecccceeEcCCCCCCCEEEEEEEEeeCCC
Confidence            33445677999999999999999999987654

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.2e-11  Score=93.42  Aligned_cols=96  Identities=17%  Similarity=0.240  Sum_probs=72.2

Q ss_pred             cCCCCCceEEEe--eeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         185 MVRAPLGVKALA--TSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       185 ~p~~p~~l~~~~--~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      .|.+|.++.+..  .+.++|.|+|++|...++.+.+|.|+|+..........                            
T Consensus         4 kP~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~----------------------------   55 (115)
T d1bqua2           4 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI----------------------------   55 (115)
T ss_dssp             ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEEC----------------------------
T ss_pred             ECCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecc----------------------------
Confidence            367888888865  45788999999988777889999999998633221111                            


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCc---cceEEee
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS---GKVTVKV  308 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s---~~~~~~t  308 (427)
                      +........+++.|.+|.+++.|.|+|+|.+..|.|.+|   ..+.++|
T Consensus        56 ~~~~~~~~~~~~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T  104 (115)
T d1bqua2          56 PPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGIT  104 (115)
T ss_dssp             CGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEE
T ss_pred             ccccccccccEEeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEEC
Confidence            022334566799999999999999999999999987655   5566776

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.7e-11  Score=90.65  Aligned_cols=92  Identities=17%  Similarity=0.198  Sum_probs=66.9

Q ss_pred             cCCCCCceEEE----eeeCcEEEEEeeeCCCCC----CceeEEEEEEEecccccccccccccccccccccceeEEeeecc
Q psy8774         185 MVRAPLGVKAL----ATSDQSVEVWWKPVPAGR----GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTA  256 (427)
Q Consensus       185 ~p~~p~~l~~~----~~~~~si~v~W~~p~~~~----g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (427)
                      .|.+|.++.+.    ....+++.|+|++|...+    +.+..|.+.++..+.   ..+                      
T Consensus         2 kP~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~---~~~----------------------   56 (104)
T d3d48r2           2 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKA---AEW----------------------   56 (104)
T ss_dssp             CCCCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTC---SSC----------------------
T ss_pred             CCcCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccc---cce----------------------
Confidence            36889998875    335678999999987432    356778888877522   222                      


Q ss_pred             ccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC-CCCccceEEee
Q psy8774         257 VEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL-GRLSGKVTVKV  308 (427)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~-g~~s~~~~~~t  308 (427)
                             ........++++|.+|.+++.|.|+|+|.|..|. |.+|..+.++|
T Consensus        57 -------~~~~~~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~t  102 (104)
T d3d48r2          57 -------EIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQI  102 (104)
T ss_dssp             -------EEEEEETCSEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred             -------eeeccccccEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEEC
Confidence                   2334456778999999999999999999999996 99999998887

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.5e-11  Score=90.87  Aligned_cols=87  Identities=14%  Similarity=0.126  Sum_probs=67.9

Q ss_pred             CCCCCceEEEeee--CcEEEEEeeeCCC--CCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccc
Q psy8774         186 VRAPLGVKALATS--DQSVEVWWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLD  261 (427)
Q Consensus       186 p~~p~~l~~~~~~--~~si~v~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (427)
                      |.+|.++.+..+.  .++|.|+|++|..  .++.+..|+|+|+..+.   ..+.                          
T Consensus         2 P~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~---~~~~--------------------------   52 (104)
T d1n26a3           2 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERS---KTFT--------------------------   52 (104)
T ss_dssp             CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTC---SCCE--------------------------
T ss_pred             CcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCC---Ccee--------------------------
Confidence            6899999998764  4689999999864  34678999999997632   2220                          


Q ss_pred             cccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc
Q psy8774         262 EWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK  303 (427)
Q Consensus       262 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~  303 (427)
                        ........++++|.+|.|++.|.|+|+|.|..|.|.+|+.
T Consensus        53 --~~~~~~~~~~~~i~~L~p~t~Y~~rVra~n~~g~g~wSew   92 (104)
T d1n26a3          53 --TWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEW   92 (104)
T ss_dssp             --EEECGGGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCC
T ss_pred             --eeccccceEEEEECCCCCCCEEEEEEEEEeCCCccCCcCC
Confidence              1123345678999999999999999999999999888763

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.1e-11  Score=90.28  Aligned_cols=89  Identities=15%  Similarity=0.189  Sum_probs=64.2

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      .|..+.+...+.++|.|+|+++.  ..++.+.+|.|+|+...+...+....   ...+++.|.+|.|++.|.|+|+|.|.
T Consensus         9 ~P~~p~~~~~~~~~v~l~W~pp~--~~~~~~~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frVra~n~   86 (105)
T d2d9qb2           9 MDPSPEAAPPQAGCLQLSWEPWQ--PGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRW   86 (105)
T ss_dssp             CCC-------CCSCEEEEEECCG--GGTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEEC
T ss_pred             CCCCCEeecCCCCeEEEEEcCCC--CCCceeEEEEEEEEecCCccceeeeecccCCcceeEEecccCCeEEEEEEEEEeC
Confidence            34566777888999999999984  45578889999999875555554332   44778999999999999999999999


Q ss_pred             CCCCC---CCCCeEEEc
Q psy8774         168 AGPGP---WSPKLSLMT  181 (427)
Q Consensus       168 ~g~~~---~s~~~~~~t  181 (427)
                      .|.|.   +|..+.++|
T Consensus        87 ~g~G~~S~wS~~~~~~t  103 (105)
T d2d9qb2          87 PLPGHWSDWSPSLELRT  103 (105)
T ss_dssp             SSCCCCCCCCCCEEECC
T ss_pred             CCCCCCcCCCCCEEEeC
Confidence            99875   455665554

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=4.2e-11  Score=88.44  Aligned_cols=87  Identities=20%  Similarity=0.354  Sum_probs=68.6

Q ss_pred             CCCCeeeEEEee--cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEE
Q psy8774          89 TGPPANISHHFQ--TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        89 ~~~p~~~~~~~~--~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      |.||.++.+..+  .++.+.|+|++|...+.++.+..|.|+|+..... .+....  ...+.+.|.+|.|++.|.|+|+|
T Consensus         2 P~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra   80 (104)
T d1n26a3           2 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSK-TFTTWMVKDLQHHCVIHDAWSGLRHVVQLRA   80 (104)
T ss_dssp             CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCS-CCEEEECGGGCSEEEESSCCTTCCEEEEEEE
T ss_pred             CcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCC-ceeeeccccceEEEEECCCCCCCEEEEEEEE
Confidence            357889988775  4568999999986555667889999999987433 333332  44789999999999999999999


Q ss_pred             eeCCCCCCCCCC
Q psy8774         165 ITKAGPGPWSPK  176 (427)
Q Consensus       165 ~~~~g~~~~s~~  176 (427)
                      .|..|.|.+|+.
T Consensus        81 ~n~~g~g~wSew   92 (104)
T d1n26a3          81 QEEFGQGEWSEW   92 (104)
T ss_dssp             EETTTBSCCCCC
T ss_pred             EeCCCccCCcCC
Confidence            999999877653

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.7e-11  Score=90.86  Aligned_cols=91  Identities=22%  Similarity=0.347  Sum_probs=69.5

Q ss_pred             CCCCCceEEEeee------CcEEEEEeeeCCCCC----CceeEEEEEEEecccccccccccccccccccccceeEEeeec
Q psy8774         186 VRAPLGVKALATS------DQSVEVWWKPVPAGR----GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMT  255 (427)
Q Consensus       186 p~~p~~l~~~~~~------~~si~v~W~~p~~~~----g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (427)
                      |.||.+|.+...+      .++|.|+|++|...+    ..+..|+|+|+..+   ...|                     
T Consensus         1 PdPP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~---~~~w---------------------   56 (106)
T d1axib2           1 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVN---ETKW---------------------   56 (106)
T ss_dssp             CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETT---CSSC---------------------
T ss_pred             CcCCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecC---Cccc---------------------
Confidence            5789999886543      347999999987533    25778999999863   2333                     


Q ss_pred             cccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC--CCCCccceEEee
Q psy8774         256 AVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG--LGRLSGKVTVKV  308 (427)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G--~g~~s~~~~~~t  308 (427)
                              ........+.++|.+|.+++.|.|+|+|.+..|  .|.+|..+.+++
T Consensus        57 --------~~~~~~~~~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~  103 (106)
T d1axib2          57 --------KMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTL  103 (106)
T ss_dssp             --------EECCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECC
T ss_pred             --------eeeeecccceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEC
Confidence                    334445567999999999999999999998665  589998888776

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.7e-11  Score=95.71  Aligned_cols=102  Identities=19%  Similarity=0.153  Sum_probs=77.0

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCC--------cceeEEEEEEEEccCCCceE-EEeeeeeEEEEccCCCCcEEEEEE
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRN--------GQIVLYNVKFHKKIDANNVI-HRNTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~--------~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      +....+..++.+++.|+|++|... .+        ..+.+|.|.+........+. ......+++.|.+|.|++.|.|+|
T Consensus        21 ~~~P~V~~v~~~sv~l~W~~P~~~-~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~P~t~Y~f~V   99 (137)
T d1wk0a_          21 IVKPVASDIQARTVVLTWSPPSSL-INGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYHAKV   99 (137)
T ss_dssp             CCCCEEESCCSSCEEEECCCCCCC-STTSSCSSCSCSCCEEEEEECSSCTTSCCEEEEEESCSEEEECSCCTTCEECEEE
T ss_pred             CCCCEEEEeEcCEEEEEEeCcCcC-CCceeeccccceEEeeEEEEeeCCCCccEEEEEecCccEEEECCCCCCcEEEEEE
Confidence            334577888999999999988521 11        14567899887664333333 334568899999999999999999


Q ss_pred             EEeeCCCCCCCCCCeEEEcccccCCCCCceEE
Q psy8774         163 QAITKAGPGPWSPKLSLMTARDMVRAPLGVKA  194 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~  194 (427)
                      +|.|..|.|.+|..+.++|...+|.+|.-.++
T Consensus       100 ~A~n~~G~g~~S~~~~~~T~~~~P~~p~~p~i  131 (137)
T d1wk0a_         100 QAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRI  131 (137)
T ss_dssp             EEEETTEECCCCCCCCEECCCSSSCCCSCSCC
T ss_pred             EEEcCCcccCCCCCEEEECCCCCCCCCCCCEE
Confidence            99999999999999999997777665544443

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=4.3e-11  Score=88.41  Aligned_cols=92  Identities=15%  Similarity=0.238  Sum_probs=72.3

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce---EEEeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV---IHRNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~---~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      .||.+|++...+.+++.|+|++|...........|.+++.........   .........+.|.+|.|++.|.|+|+|.+
T Consensus         4 ~pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra~~   83 (104)
T d2b5ib2           4 MAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKP   83 (104)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEEecCCCcEEEEECCCCCCCEEEEEEEEEE
Confidence            579999999999999999999986544445667899999877433222   22334578899999999999999999999


Q ss_pred             CCCC----CCCCCCeEEEc
Q psy8774         167 KAGP----GPWSPKLSLMT  181 (427)
Q Consensus       167 ~~g~----~~~s~~~~~~t  181 (427)
                      ..|.    |.+|.++.++|
T Consensus        84 ~~g~~g~wS~wS~~v~~~T  102 (104)
T d2b5ib2          84 LQGEFTTWSPWSQPLAFRT  102 (104)
T ss_dssp             SCCSSCCCCCCCCCEEEEC
T ss_pred             CCCCCCCCCCCcCCEEEEC
Confidence            8875    35677788876

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.3e-11  Score=87.46  Aligned_cols=80  Identities=15%  Similarity=0.228  Sum_probs=65.3

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe--ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      +.++++++|.|+|+++.  ++.+.+|.|+|+..++..+....  ....+++.|.+|.|++.|.|+|+|.+..|.|.+...
T Consensus         9 ~~~~~~~sv~l~W~~p~--~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~S~p~~~   86 (91)
T d1fnfa2           9 FTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRG   86 (91)
T ss_dssp             EESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred             EEEeCCCEEEEEEEecC--CCCcceeEEEEEECCCCccEEEEEeCCCceEEEEeceeCCCEEEEEEEEEcCCCCCCCEEE
Confidence            45778999999999985  55789999999987765443332  667889999999999999999999999998876665


Q ss_pred             EEeC
Q psy8774          80 YYTT   83 (427)
Q Consensus        80 ~~~t   83 (427)
                      ...|
T Consensus        87 ~~~T   90 (91)
T d1fnfa2          87 RQKT   90 (91)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            5554

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1e-11  Score=91.75  Aligned_cols=84  Identities=26%  Similarity=0.423  Sum_probs=68.5

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc----eEEE---eeeeeEEEEccCCCCcEEEEEE
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN----VIHR---NTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~----~~~~---~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      .+|.++++...+.+++.|+|++|  .+.+|.+.+|.|+|+.......    +...   .....++.|.+|.|++.|.|+|
T Consensus         4 ~~P~~~~~~~~~~~sv~v~W~~P--~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V   81 (103)
T d1qg3a2           4 SEPGRLAFNVVSSTVTQLSWAEP--AETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTV   81 (103)
T ss_dssp             CCCCCCEEEEEETTEEEEECCCC--SCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEECCTTCCEEEECCCCTTCCEEEEE
T ss_pred             ccCCCcEEEEecCCEEEEEEEEC--ccCCCCceEEEEEeeccccccccccceEEEEecCCCceEEEEeecCCCCEEEEEE
Confidence            57899999999999999999998  4677899999999987643221    1111   2447889999999999999999


Q ss_pred             EEeeCCCCCCCCC
Q psy8774         163 QAITKAGPGPWSP  175 (427)
Q Consensus       163 ~a~~~~g~~~~s~  175 (427)
                      +|.|..|.|+.+.
T Consensus        82 ~A~n~~G~g~~s~   94 (103)
T d1qg3a2          82 KARNGAGWGPERE   94 (103)
T ss_dssp             EEEETTEECCCEE
T ss_pred             EEEcCCccCCCcc
Confidence            9999999997654

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=6.1e-11  Score=85.19  Aligned_cols=77  Identities=25%  Similarity=0.445  Sum_probs=63.9

Q ss_pred             eeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--EeeeeeEEEEccCCCCcEEEEEEEEeeCCCC
Q psy8774          93 ANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTTQTKAVFSNLEEGIEYSAEVQAITKAGP  170 (427)
Q Consensus        93 ~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~  170 (427)
                      ++|++...+.+++.|+|++|.     +.+.+|.|+|...++......  ...+.+++.|.+|.|++.|.|+|.|.+..|.
T Consensus         1 rnl~v~~~t~~sv~l~W~~p~-----~~~~~Y~v~~~~~~~~~~~~~~~~~~~~t~~~l~~L~p~t~Y~~~V~a~~~~g~   75 (91)
T d1fnaa_           1 RDLEVVAATPTSLLISWDAPA-----VTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGD   75 (91)
T ss_dssp             CCCEEEEECSSCEEEECCCCS-----SCCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECTTCC
T ss_pred             CCCEEEEeCCCEEEEEEEccc-----eEecEEEEEEEcCCCCceeEEEEeCCCccEEEeCCCCCCCEEEEEEEEEeCCcc
Confidence            478999999999999999884     578899999998754444333  3356889999999999999999999999998


Q ss_pred             CCCC
Q psy8774         171 GPWS  174 (427)
Q Consensus       171 ~~~s  174 (427)
                      |+.+
T Consensus        76 s~~~   79 (91)
T d1fnaa_          76 SPAS   79 (91)
T ss_dssp             SSCS
T ss_pred             CCCc
Confidence            8654

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.8e-11  Score=88.81  Aligned_cols=91  Identities=13%  Similarity=0.044  Sum_probs=69.3

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW  263 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (427)
                      .||.+|.++++...+.+++.|+|+++.. ++...+|.|.|+.........                              
T Consensus         2 ~PP~~P~n~~~~~~~~~si~~~W~p~~~-~~~~~~y~v~~~~~~~~~~~~------------------------------   50 (95)
T d1bqua1           2 LPPEKPKNLSCIVNEGKKMRCEWDGGRE-THLETNFTLKSEWATHKFADC------------------------------   50 (95)
T ss_dssp             CCCCCCEEEEEEEETTSCCEEEEECCSC-CSSCCEEEEEEEETTEECCCE------------------------------
T ss_pred             cCcCCCeeeEEEEccCCEEEEEEeCccc-CCCceEEEEEEEEcccceeEe------------------------------
Confidence            3689999999999999999999999874 455689999998863321111                              


Q ss_pred             cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEE
Q psy8774         264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV  306 (427)
Q Consensus       264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~  306 (427)
                      .........++.+.+|.+++.|.|+|+|.|..|.|. |..+.+
T Consensus        51 ~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~s~-S~~v~~   92 (95)
T d1bqua1          51 KAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVT-SDHINF   92 (95)
T ss_dssp             ECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEE-CCCEEE
T ss_pred             ecccccceeeeeeeecCCCcEEEEEEEEEeCCcccc-CCCeec
Confidence            112234556788889999999999999999999876 544543

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=8e-12  Score=91.93  Aligned_cols=90  Identities=12%  Similarity=0.017  Sum_probs=59.2

Q ss_pred             CCCCCceEEEeeeCcEEEEEeeeCCCCCC---ceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         186 VRAPLGVKALATSDQSVEVWWKPVPAGRG---KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g---~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      |.+|.+|++...+++++.|+|.+|...++   ....|.|+|+..+.......                            
T Consensus         2 P~~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~----------------------------   53 (101)
T d1iarb2           2 PRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRI----------------------------   53 (101)
T ss_dssp             CCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEE----------------------------
T ss_pred             cccCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeee----------------------------
Confidence            68999999999999999999998875443   34569999987633221111                            


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccc
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGK  303 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~  303 (427)
                      +..........+++.+|.|++.|.|+|+|.+..|.|.+|+.
T Consensus        54 ~~~~~~~~~~~~~i~~L~p~t~Y~~rVrA~~~~g~g~wSew   94 (101)
T d1iarb2          54 YNVTYLEPSLRIAASTLKSGISYRARVRAWAQAYNTTWSEW   94 (101)
T ss_dssp             EEECSSCCEEEECC-----CCCEEEEEEEECGGGTCCCCCC
T ss_pred             eeeccCccceEEEECCCCCCCEEEEEEEEEcCCCCCCCcCC
Confidence            01223344567899999999999999999999998887764

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.3e-11  Score=92.85  Aligned_cols=79  Identities=22%  Similarity=0.352  Sum_probs=67.3

Q ss_pred             cceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCC
Q psy8774           6 PEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTP   84 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~   84 (427)
                      +.++|.|+|++|.+.++++.+|.|+|+..+...+........+++.+.+|.+++.|.|+|+|.|..|.|.+....+.|.
T Consensus        32 ~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~  110 (113)
T d1x5ia1          32 LVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTR  110 (113)
T ss_dssp             ETTEEEEEEECCSCTTBCCCEEEEEECSSCGGGEEEECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECC
T ss_pred             CCCEEEEEEEccccCCccEEEEEEEeeeccccceeeeeeCCccEEEEeccccCcEEEEEEEEECCCcCCCCeeeEEEeC
Confidence            4578999999998878899999999987766555555577889999999999999999999999999998766666663

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=7.5e-13  Score=100.33  Aligned_cols=98  Identities=18%  Similarity=0.243  Sum_probs=69.6

Q ss_pred             EEc-ccccCCCCCceEEEe-eeCcEEEEEeeeCCCC------CCceeEEEEEEEecccccccccccccccccccccceeE
Q psy8774         179 LMT-ARDMVRAPLGVKALA-TSDQSVEVWWKPVPAG------RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI  250 (427)
Q Consensus       179 ~~t-~~~~p~~p~~l~~~~-~~~~si~v~W~~p~~~------~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (427)
                      |+| ...+|.+|.++++.. .+++++.|+|++|...      ++.+.+|.|++...   ....                 
T Consensus         3 ~~T~~~~pp~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~---~~~~-----------------   62 (117)
T d2cspa1           3 FSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQ---RVAE-----------------   62 (117)
T ss_dssp             CCCCCCCCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSS---EEEE-----------------
T ss_pred             EEeCCCCCCCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecc---ccee-----------------
Confidence            455 456778999999864 5677999999998642      23455565543211   1000                 


Q ss_pred             EeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774         251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK  309 (427)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~  309 (427)
                                   ......+.+.+.|.+|++++.|.|+|+|+|..|.|..|..+.+.|.
T Consensus        63 -------------~~~~~~~~~~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t~  108 (117)
T d2cspa1          63 -------------VIFPTADSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPPE  108 (117)
T ss_dssp             -------------ECCTTCSEEEEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCHH
T ss_pred             -------------eeeeccceeeeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeCC
Confidence                         1122344567889999999999999999999999999999888874

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.22  E-value=7.7e-11  Score=84.99  Aligned_cols=86  Identities=15%  Similarity=0.228  Sum_probs=68.9

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE--EeeeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH--RNTTQTKAVFSNLEEGIEYSAEVQAITK  167 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  167 (427)
                      .+|.++.+...+.+++.|+|++|.     +.+.+|.|.|+..........  ...+.+.+.|.+|.|++.|.|+|+|.+.
T Consensus         5 ~~P~~l~v~~v~~~si~v~W~~p~-----~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~   79 (93)
T d1tdqa1           5 DGPTQILVRDVSDTVAFVEWTPPR-----AKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRG   79 (93)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CcCCCCEEEEeCCCEEEEEEEccc-----cCCCceEEEEEeccCcceeeEEEeCCCceEEEEeCcccceEEEEEEEEEeC
Confidence            479999999999999999999874     578899999998754433332  3355789999999999999999999999


Q ss_pred             CCCCCCCCCeEEEc
Q psy8774         168 AGPGPWSPKLSLMT  181 (427)
Q Consensus       168 ~g~~~~s~~~~~~t  181 (427)
                      .|.|..+ ...++|
T Consensus        80 ~g~s~~~-~~~~tT   92 (93)
T d1tdqa1          80 TNESDAS-STQFTT   92 (93)
T ss_dssp             TEECCCE-EEEEEC
T ss_pred             CCCcCCE-EEEEEC
Confidence            9887543 344443

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=8.2e-12  Score=89.50  Aligned_cols=77  Identities=19%  Similarity=0.290  Sum_probs=62.4

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe--ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      +.+++++++.|+|++|   .+.+.+|.|+|+..++..+....  ....+++.+.+|.|++.|.|+|+|.+..|.|.+...
T Consensus         9 v~~~~~~s~~l~W~~p---~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~n~~g~S~p~~~   85 (89)
T d1fnha3           9 FLATTPNSLLVSWQPP---RARITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPLIG   85 (89)
T ss_dssp             EEEEETTEEEEEEECC---SSCCSEEEEEEECTTSCCEECTTCCCTTCCEEEEESCCTTCEEEEEEEEESSSCEEEEEEE
T ss_pred             EEEecCCEEEEEEeCC---CcCCceEEEEEeeccCCccEEEEEcCCCccEEEEEeeeCCCEEEEEEEEEcCCCEeCCEEE
Confidence            3567889999999998   45789999999987766544332  567789999999999999999999999998865444


Q ss_pred             EE
Q psy8774          80 YY   81 (427)
Q Consensus        80 ~~   81 (427)
                      .+
T Consensus        86 ~~   87 (89)
T d1fnha3          86 RK   87 (89)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.3e-11  Score=87.31  Aligned_cols=80  Identities=18%  Similarity=0.271  Sum_probs=66.2

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeE--eecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENL--VNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      +.++++++|.|+|++|   .+.+.+|.|+|+...+..+...  .....+++++.+|.|++.|.|+|+|.|..|.|.++..
T Consensus         8 ~~~v~~~si~l~W~~p---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~~~~   84 (90)
T d1fnha1           8 FTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQG   84 (90)
T ss_dssp             EEEECSSCEEEEEECC---SSCCSEEEEEEEESSSCSCCCEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred             EEEecCCEEEEEEEcc---ceeccceEEEEEeeeCCCceEEEEeCCCCeEEEEecccCceEEEEEEEEEeCCCCcCCEeE
Confidence            4567899999999998   4567899999988766544332  2778899999999999999999999999999988777


Q ss_pred             EEeCC
Q psy8774          80 YYTTP   84 (427)
Q Consensus        80 ~~~t~   84 (427)
                      .+.|.
T Consensus        85 ~~~T~   89 (90)
T d1fnha1          85 VVTTL   89 (90)
T ss_dssp             EEECC
T ss_pred             EEEcC
Confidence            77664

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=4.2e-12  Score=97.48  Aligned_cols=115  Identities=17%  Similarity=0.241  Sum_probs=76.0

Q ss_pred             CCCCceEEEeeeCcEEEEEeeeCCCCC-CceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774         187 RAPLGVKALATSDQSVEVWWKPVPAGR-GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ  265 (427)
Q Consensus       187 ~~p~~l~~~~~~~~si~v~W~~p~~~~-g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (427)
                      ..|.+|.+...+.++|.|+|++|...+ +.+.+|.|+|+...............+-..   .    +.+...........
T Consensus         3 s~plnl~~~~~sstsv~lsW~pP~~~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~   75 (125)
T d2dtge3           3 NELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSN---S----WTVVDIDPPLRSND   75 (125)
T ss_dssp             CCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCC---C----CCCCCSCCEEEECC
T ss_pred             CCCEEEEEEEecCCEEEEEEeCCCccCCCcEEEEEEEEEECCCCceEEEeeccccCCc---c----cceecccCcceeee
Confidence            468899999999999999999987544 789999999987633221111100000000   0    00000000000122


Q ss_pred             cccCCCCceeccCCCCCCeEEEEEEEEeccCC-----CCCccceEEee
Q psy8774         266 KSVPLTESAELTSLEKFTEYAVAVAARTVNGL-----GRLSGKVTVKV  308 (427)
Q Consensus       266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~-----g~~s~~~~~~t  308 (427)
                      ......++++|.+|+|++.|.|+|+|+|..|+     |+.|+.+.++|
T Consensus        76 ~~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T  123 (125)
T d2dtge3          76 PKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQT  123 (125)
T ss_dssp             CCSSSCCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBC
T ss_pred             ecCCccCEEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEc
Confidence            33456678999999999999999999999995     78898888887

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.3e-13  Score=99.66  Aligned_cols=94  Identities=23%  Similarity=0.429  Sum_probs=74.8

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccCCCCcEEEEEE
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      .|+..|..+.+...++++|.|+|++|  ...+|.+.+|.|+|+...........    ......+.+.+|.+++ |.|+|
T Consensus         3 ~~~d~P~~v~~~~~~~~sv~l~W~pP--~~~ng~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t-Y~~rV   79 (102)
T d2dtge1           3 KADDIVGPVTHEIFENNVVHLMWQEP--KEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPGN-YSVRI   79 (102)
T ss_dssp             CCCCCCCCCCCCSSSSSCCCCCCCCC--CSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSSE-ECCCC
T ss_pred             CCCCCCCCCEEEEECCCEEEEEEEeC--CCCcceEEEeeeEEEecCCCCceeeeeeecccceEEEEEeccceee-EEEEE
Confidence            45566778888888999999999988  46678999999999876433322211    1346678999999975 99999


Q ss_pred             EEeeCCCCCCCCCCeEEEccc
Q psy8774         163 QAITKAGPGPWSPKLSLMTAR  183 (427)
Q Consensus       163 ~a~~~~g~~~~s~~~~~~t~~  183 (427)
                      +|.|..|.|++|+.+.|.+++
T Consensus        80 ~A~n~~G~g~~S~~v~f~~~e  100 (102)
T d2dtge1          80 RATSLAGNGSWTEPTYFYVTD  100 (102)
T ss_dssp             CEEETTBCCCCCCCCEECCCC
T ss_pred             EEEcCCccCCCCCCEEEEccC
Confidence            999999999999999998754

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=2e-11  Score=92.13  Aligned_cols=95  Identities=23%  Similarity=0.389  Sum_probs=71.9

Q ss_pred             CCCeeeEEEe--ecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe-----eeeeEEEEccCCCCcEEEEEE
Q psy8774          90 GPPANISHHF--QTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-----TTQTKAVFSNLEEGIEYSAEV  162 (427)
Q Consensus        90 ~~p~~~~~~~--~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~~i~~L~p~t~Y~~~V  162 (427)
                      .||.++.+..  .+.++|.|+|+++.  +.++.+.+|.|+|+...+.. +....     ...+.+.|.+|.+++.|.|+|
T Consensus         6 ~pP~~~~v~~~~~~~~si~v~W~~p~--~~~~~~~~Y~v~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V   82 (115)
T d1bqua2           6 NPPHNLSVINSEELSSILKLTWTNPS--IKSVIILKYNIQYRTKDAST-WSQIPPEDTASTRSSFTVQDLKPFTEYVFRI   82 (115)
T ss_dssp             CCCEEEEEECC--CCSCEEEEEECCG--GGGTSCEEEEEEEEETTCSS-CEECCGGGGCSCCSEEEECSCCSSEEEEEEE
T ss_pred             CCCCCCEEEEeccCCCEEEEEEeecc--ccccceeeeeeeeeeeeeee-eeccccccccccccEEeeCCCccCcEEEEEE
Confidence            5688887763  56788999999884  55678899999999874332 22221     346899999999999999999


Q ss_pred             EEeeCCCCCCC---CCCeEEEcccccCC
Q psy8774         163 QAITKAGPGPW---SPKLSLMTARDMVR  187 (427)
Q Consensus       163 ~a~~~~g~~~~---s~~~~~~t~~~~p~  187 (427)
                      +|.|..|.|.+   |..+.++|..+.|.
T Consensus        83 ~a~~~~G~g~~S~~S~~~~~~T~~~~P~  110 (115)
T d1bqua2          83 RCMKEDGKGYWSDWSEEASGITYEDRPS  110 (115)
T ss_dssp             EEEETTSCSCCCCCCCCEEEEECCCHHH
T ss_pred             EEEeCCCccCCcCCcCCEEEECCCCCCC
Confidence            99999998754   56777888665543

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=9.6e-11  Score=86.67  Aligned_cols=92  Identities=14%  Similarity=0.282  Sum_probs=67.9

Q ss_pred             CCCeeeEEEeec------CCEEEEEeeCCCCCCC--CcceeEEEEEEEEccCCCceEEEe-eeeeEEEEccCCCCcEEEE
Q psy8774          90 GPPANISHHFQT------PDVVCITWDPPLRTHR--NGQIVLYNVKFHKKIDANNVIHRN-TTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        90 ~~p~~~~~~~~~------~~~v~v~W~~p~~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~  160 (427)
                      .||.+|.+....      ..+|.|+|++|.....  .+.+..|.|+|+..+. ..+.... ...+.+.|.+|.+++.|.|
T Consensus         2 dPP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~-~~w~~~~~~~~~~~~i~~L~~~t~Y~f   80 (106)
T d1axib2           2 DPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNE-TKWKMMDPILTTSVPVYSLKVDKEYEV   80 (106)
T ss_dssp             CCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTC-SSCEECCCBSSSEEEEEEEETTSCEEE
T ss_pred             cCCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCC-ccceeeeecccceEEECCCCCCCEEEE
Confidence            578898876432      3479999999864322  2256789999998743 3344333 5578999999999999999


Q ss_pred             EEEEeeCCCC--CCCCCCeEEEcc
Q psy8774         161 EVQAITKAGP--GPWSPKLSLMTA  182 (427)
Q Consensus       161 ~V~a~~~~g~--~~~s~~~~~~t~  182 (427)
                      +|+|.+..|.  |.+|+.+.++++
T Consensus        81 rVRa~~~~~g~ws~wS~~v~v~~P  104 (106)
T d1axib2          81 RVRSKQRNSGNYGEFSEVLYVTLP  104 (106)
T ss_dssp             EEEEEETTSSCCCCCCCCEEECCC
T ss_pred             EEEEEECCCCCCCCCCCCEEEECC
Confidence            9999986553  788888888764

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=7.3e-11  Score=87.37  Aligned_cols=83  Identities=14%  Similarity=0.272  Sum_probs=60.8

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      |..+.+...+.++|.|+|++|.  ..++.+.+|.|+|+...+...+....   ...+++.|.+|.|++.|.|+|+|.+..
T Consensus        11 P~~p~~~~~~~~~i~v~W~pp~--~~~~~~~~Y~i~y~~~~~~~~w~~v~~~~~~~~~~~l~~L~p~t~Y~frVra~~~~   88 (106)
T d1cd9b2          11 DIGPDVVSHQPGCLWLSWKPWK--PSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSS   88 (106)
T ss_dssp             CC-------CCSCEEEEEECCG--GGTTSCEEEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESS
T ss_pred             CCCCeEecCCCCEEEEEEcCcc--cCCccceEEEEEEeeccccccceeeecccCCceEEEEeccCCCeEEEEEEEEEeCC
Confidence            4456777788999999999984  55667889999999865444444432   447889999999999999999999999


Q ss_pred             CCCCCCCC
Q psy8774         169 GPGPWSPK  176 (427)
Q Consensus       169 g~~~~s~~  176 (427)
                      |.|.+|+.
T Consensus        89 g~g~wS~w   96 (106)
T d1cd9b2          89 LPGFWSPW   96 (106)
T ss_dssp             SCCCCCCC
T ss_pred             CCCCCcCC
Confidence            99765543

>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1.1e-10  Score=87.76  Aligned_cols=97  Identities=15%  Similarity=0.112  Sum_probs=69.3

Q ss_pred             ccCCCCCceEEEeeeCcEEEEEeeeCCCCC------CceeEEEEEEEecccccccccccccccccccccceeEEeeeccc
Q psy8774         184 DMVRAPLGVKALATSDQSVEVWWKPVPAGR------GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAV  257 (427)
Q Consensus       184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~------g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (427)
                      ..|.+|.+|++. .+.+++.|+|.+|...+      ..+..|.|.|+..+.......                       
T Consensus         4 vkP~pP~nl~v~-~~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~-----------------------   59 (114)
T d2gysa2           4 VQPPEPRDLQIS-TDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAA-----------------------   59 (114)
T ss_dssp             BCCCCCEEEEEE-EETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCE-----------------------
T ss_pred             ccCCcCCCeEEE-EeCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEE-----------------------
Confidence            457899999985 56789999999986432      245679999987632211110                       


Q ss_pred             cccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC------CCCccceEEeecC
Q psy8774         258 EDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL------GRLSGKVTVKVKP  310 (427)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~------g~~s~~~~~~t~~  310 (427)
                            ..........+.+.+|.|++.|.|+|+|.+..|.      |.+|.++.+.|.|
T Consensus        60 ------~~~~~~~~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~p  112 (114)
T d2gysa2          60 ------ILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQP  112 (114)
T ss_dssp             ------EEEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred             ------EeeccCceEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcC
Confidence                  1122334557889999999999999999998875      5678888888854

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=2.6e-11  Score=87.84  Aligned_cols=79  Identities=20%  Similarity=0.357  Sum_probs=65.4

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe--ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR   79 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~   79 (427)
                      +.++++++|.|+|++|   .+.+.+|+|.|+...+..+....  ....+++.+.+|.||+.|.|+|.|.+..|.|.+...
T Consensus        10 v~~vt~~sv~l~W~~p---~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~S~p~~~   86 (94)
T d1j8ka_          10 FTDVDVDSIKIAWESP---QGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIG   86 (94)
T ss_dssp             EEEEETTEEEEECCCC---SSCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSSCCCCCEEE
T ss_pred             EEEecCCEEEEEEeCC---CccccceEEEEEeecCCCceEEEecCCCccEEEECCCCCCCEEEEEEEEEeCCCCcCCEEE
Confidence            4567899999999998   45688999999987665444332  667899999999999999999999999999887766


Q ss_pred             EEeC
Q psy8774          80 YYTT   83 (427)
Q Consensus        80 ~~~t   83 (427)
                      .+.|
T Consensus        87 ~~~T   90 (94)
T d1j8ka_          87 TQST   90 (94)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            6666

>d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor common gamma chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1.7e-10  Score=83.42  Aligned_cols=77  Identities=12%  Similarity=0.166  Sum_probs=61.5

Q ss_pred             CCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774          89 TGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA  168 (427)
Q Consensus        89 ~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~  168 (427)
                      |.+|.+|.+...+.+.+.|+|++|..    +.+..|.|+|+...............+.+.|.+|.|++.|.|+|+|....
T Consensus         3 P~~P~nl~v~~~~~~~v~l~W~~p~~----~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~frVRa~~~~   78 (95)
T d2b5ic1           3 PWAPENLTLHKLSESQLELNWNNRFL----NHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNP   78 (95)
T ss_dssp             CCCCEEEEEEEEETTEEEEEEECSSC----STTCEEEEEEEETTCSSCEEEEECSSCEEEECSCCTTSCEEEEEEEECCS
T ss_pred             CcCCCCCEEEEEeCCEEEEEECCCCC----ceeEEEEEEEEcCCCceeeEeeecccceeEcCCCCCCCEEEEEEEEeeCC
Confidence            46799999999999999999998842    45678999999885433333333457899999999999999999998665


Q ss_pred             C
Q psy8774         169 G  169 (427)
Q Consensus       169 g  169 (427)
                      +
T Consensus        79 ~   79 (95)
T d2b5ic1          79 L   79 (95)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=7.9e-11  Score=85.03  Aligned_cols=80  Identities=20%  Similarity=0.424  Sum_probs=61.7

Q ss_pred             CCCCCeeeEEEeecC-CEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc-eE--EEeeeeeEEEEccCCCCcEEEEEEE
Q psy8774          88 PTGPPANISHHFQTP-DVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN-VI--HRNTTQTKAVFSNLEEGIEYSAEVQ  163 (427)
Q Consensus        88 p~~~p~~~~~~~~~~-~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~-~~--~~~~~~~~~~i~~L~p~t~Y~~~V~  163 (427)
                      |..||.++++..... +.+.|+|++|.    .+.+.+|.|.|+...+... ..  ......+++.|.+|.|++.|.|+|.
T Consensus         1 P~~PP~~l~v~~~~~ts~i~v~W~~p~----~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~   76 (94)
T d1fnfa1           1 PLSPPTNLHLEANPDTGVLTVSWERST----TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVY   76 (94)
T ss_dssp             CCCCCEEEEEEECSSSSCEEEEEECCS----CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEE
T ss_pred             CCCcCcCcEEEEecCCCEEEEEeeCCC----CCCeeEEEEEEEEecccCceEEEEEeCCCccEEEECCCCCCCEEEEEEE
Confidence            456899999988765 45999999884    1358899999997643322 22  2234578999999999999999999


Q ss_pred             EeeCCCCC
Q psy8774         164 AITKAGPG  171 (427)
Q Consensus       164 a~~~~g~~  171 (427)
                      |.+..|.|
T Consensus        77 a~~~~g~s   84 (94)
T d1fnfa1          77 TVKDDKES   84 (94)
T ss_dssp             EEETTEEC
T ss_pred             EEcCCCEe
Confidence            99987765

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=5.5e-11  Score=86.13  Aligned_cols=89  Identities=15%  Similarity=0.066  Sum_probs=68.3

Q ss_pred             CCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEE
Q psy8774          87 PPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        87 ~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      .|+.+|.++++...+..++.|+|+++.  +. +...+|.|.++............  .....+.+.+|.+++.|.|+|.|
T Consensus         2 ~PP~~P~n~~~~~~~~~si~~~W~p~~--~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A   78 (95)
T d1bqua1           2 LPPEKPKNLSCIVNEGKKMRCEWDGGR--ET-HLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEA   78 (95)
T ss_dssp             CCCCCCEEEEEEEETTSCCEEEEECCS--CC-SSCCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEE
T ss_pred             cCcCCCeeeEEEEccCCEEEEEEeCcc--cC-CCceEEEEEEEEcccceeEeecccccceeeeeeeecCCCcEEEEEEEE
Confidence            467899999999999999999999984  33 44579999998874333322222  33566778899999999999999


Q ss_pred             eeCCCCCCCCCCeEE
Q psy8774         165 ITKAGPGPWSPKLSL  179 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~  179 (427)
                      .|..|.+. |..+.+
T Consensus        79 ~N~~G~s~-S~~v~~   92 (95)
T d1bqua1          79 ENALGKVT-SDHINF   92 (95)
T ss_dssp             EETTEEEE-CCCEEE
T ss_pred             EeCCcccc-CCCeec
Confidence            99999873 555544

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.1e-10  Score=88.34  Aligned_cols=83  Identities=23%  Similarity=0.307  Sum_probs=66.9

Q ss_pred             eecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC---ceEEEe---eeeeEEEEccCCCCcEEEEEEEEeeCCCCCC
Q psy8774          99 FQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN---NVIHRN---TTQTKAVFSNLEEGIEYSAEVQAITKAGPGP  172 (427)
Q Consensus        99 ~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~---~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~  172 (427)
                      .+++++|.|+|+++.   .++.+.+|.|.|+......   .+....   ...+++.|.+|.|++.|.|+|+|.|..|.|+
T Consensus        26 ~~s~tsi~v~W~~p~---~~~~i~gY~v~y~~~~~~~~~~~~~~~~v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~  102 (120)
T d1ujta_          26 VLTPTTVQVTWTVDR---QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM  102 (120)
T ss_dssp             CCBTTEEEEEEEESS---CCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred             EeCCCeEEEEecCCC---CCCcEEEEEEEeeecccCCCCcceEEEEeccCceeEEEECCCCCCCEEEEEEEEEeCCcCcC
Confidence            357899999999873   3468999999998764322   223332   3478899999999999999999999999999


Q ss_pred             CCCCeEEEcccc
Q psy8774         173 WSPKLSLMTARD  184 (427)
Q Consensus       173 ~s~~~~~~t~~~  184 (427)
                      .|+.+.++|.++
T Consensus       103 ~S~~~~~~T~e~  114 (120)
T d1ujta_         103 DSESKTVRTTEE  114 (120)
T ss_dssp             CCCCEEEEECSS
T ss_pred             CCCCEEEEeCCC
Confidence            999999999654

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.1e-10  Score=85.69  Aligned_cols=87  Identities=25%  Similarity=0.381  Sum_probs=57.3

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCC-CCcceeEEEEEEEEccCCCceEEEe----eeeeEEEEccCCCCcEEEEEEEE
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTH-RNGQIVLYNVKFHKKIDANNVIHRN----TTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~-~~~~i~~Y~v~~~~~~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      .+|.+|.+...+.+++.|+|.+|.... .......|.|+|+............    .....+.+.+|.|++.|.|+|+|
T Consensus         3 ~~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVrA   82 (101)
T d1iarb2           3 RAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRA   82 (101)
T ss_dssp             CCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSCCEEEECC-----CCCEEEEEEE
T ss_pred             ccCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeeeccCccceEEEECCCCCCCEEEEEEEE
Confidence            578999999999999999999884222 1234457999998875444333222    23577899999999999999999


Q ss_pred             eeCCCCCCCCCC
Q psy8774         165 ITKAGPGPWSPK  176 (427)
Q Consensus       165 ~~~~g~~~~s~~  176 (427)
                      .+..|.|.+|+.
T Consensus        83 ~~~~g~g~wSew   94 (101)
T d1iarb2          83 WAQAYNTTWSEW   94 (101)
T ss_dssp             ECGGGTCCCCCC
T ss_pred             EcCCCCCCCcCC
Confidence            999998876654

>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=1.1e-09  Score=82.18  Aligned_cols=94  Identities=18%  Similarity=0.261  Sum_probs=68.3

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCC----CcceeEEEEEEEEccCCCceE-EEe--eeeeEEEEccCCCCcEEEE
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHR----NGQIVLYNVKFHKKIDANNVI-HRN--TTQTKAVFSNLEEGIEYSA  160 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~----~~~i~~Y~v~~~~~~~~~~~~-~~~--~~~~~~~i~~L~p~t~Y~~  160 (427)
                      .+.+|.+|.+. .+.+.+.|+|++|.....    ...+..|.|+|+......... ...  ...+.+.+.+|.|++.|.|
T Consensus         5 kP~pP~nl~v~-~~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~   83 (114)
T d2gysa2           5 QPPEPRDLQIS-TDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVA   83 (114)
T ss_dssp             CCCCCEEEEEE-EETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEEESSSEEEECTTTCCTTCEEEE
T ss_pred             cCCcCCCeEEE-EeCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEeeccCceEEEEeCCCCCCcEEEE
Confidence            45689999986 466799999999853222    234568999999874432222 222  3467888899999999999


Q ss_pred             EEEEeeCCCC------CCCCCCeEEEcc
Q psy8774         161 EVQAITKAGP------GPWSPKLSLMTA  182 (427)
Q Consensus       161 ~V~a~~~~g~------~~~s~~~~~~t~  182 (427)
                      +|+|.+..|.      |.+|.++.+.|.
T Consensus        84 rVRa~~~~g~~~~g~wS~WS~~v~~~t~  111 (114)
T d2gysa2          84 RVRTRLAPGSRLSGRPSKWSPEVCWDSQ  111 (114)
T ss_dssp             EEEEEECTTSSCCBCCCCCCCCEEEECC
T ss_pred             EEEEEeCCCCCCCCCccCCcCCEeeeCc
Confidence            9999998876      367888888874

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.2e-09  Score=79.03  Aligned_cols=92  Identities=24%  Similarity=0.353  Sum_probs=67.0

Q ss_pred             CCCCeeeEEEee-cCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          89 TGPPANISHHFQ-TPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        89 ~~~p~~~~~~~~-~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      +.||.++.+... +...+.|+|.+|. ....+.+.+|.|+|+..+.........  ...+++.|.+|.|++.|.|+|+|.
T Consensus         5 ~dPP~nl~v~~~~~~~~l~v~W~~P~-~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~rVRar   83 (105)
T d1erna2           5 LDAPVGLVARLADESGHVVLRWLPPP-ETPMTSHIRYEVDVSAGNGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRAR   83 (105)
T ss_dssp             CCCCEEEEEEECCC-CCEEEEEECSS-SCSCGGGEEEEEEEEEC-CCCEEEEEEECTTCCEEEECSCCSSCEEEEEEEEE
T ss_pred             cCCCCCCEEEEecCCCcEEEEeeecc-ccccceEEEEEEEEecCCCCCceEEEeecCCccEEEEeCCCCCcEEEEEEEEE
Confidence            457899998865 4557999999885 344557779999999874443333332  346889999999999999999998


Q ss_pred             eCC--CC---CCCCCCeEEEc
Q psy8774         166 TKA--GP---GPWSPKLSLMT  181 (427)
Q Consensus       166 ~~~--g~---~~~s~~~~~~t  181 (427)
                      ...  +.   |.+|.++.+.|
T Consensus        84 ~~~~~~~G~WSeWS~~v~~~t  104 (105)
T d1erna2          84 MAEPSFGGFWSAWSEPVSLLT  104 (105)
T ss_dssp             ECSSSCCBCCCCCCCCEEEEC
T ss_pred             ECCCCCCCCCCCCCCCEEeeC
Confidence            643  22   45777787776

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=8.7e-10  Score=81.28  Aligned_cols=94  Identities=21%  Similarity=0.270  Sum_probs=67.9

Q ss_pred             cCCCCCceEEEeee-CcEEEEEeeeCCCC-CCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         185 MVRAPLGVKALATS-DQSVEVWWKPVPAG-RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       185 ~p~~p~~l~~~~~~-~~si~v~W~~p~~~-~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      .|.||.++.+.... .+.+.|+|.+|... .+.+..|+|+|+..+.... ..                            
T Consensus         4 k~dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~-~~----------------------------   54 (105)
T d1erna2           4 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGS-VQ----------------------------   54 (105)
T ss_dssp             CCCCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCE-EE----------------------------
T ss_pred             ccCCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCc-eE----------------------------
Confidence            46899999998764 45699999988644 3567899999998732211 11                            


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEecc----C-CCCCccceEEee
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVN----G-LGRLSGKVTVKV  308 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~----G-~g~~s~~~~~~t  308 (427)
                       ........+++.|.+|.+++.|.|+|+|....    | .|.+|.++.++|
T Consensus        55 -~~~~~~~~t~~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~t  104 (105)
T d1erna2          55 -RVEILEGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLT  104 (105)
T ss_dssp             -EEEECTTCCEEEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEEC
T ss_pred             -EEeecCCccEEEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeC
Confidence             22334556789999999999999999998653    2 356777787776

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=4.1e-10  Score=83.75  Aligned_cols=92  Identities=20%  Similarity=0.212  Sum_probs=66.6

Q ss_pred             cCCCCCceEEEee--eCcEEEEEeeeCCCC---CCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccc
Q psy8774         185 MVRAPLGVKALAT--SDQSVEVWWKPVPAG---RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVED  259 (427)
Q Consensus       185 ~p~~p~~l~~~~~--~~~si~v~W~~p~~~---~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (427)
                      .|.||.++++..+  +.+++.|+|++|...   .+....|.+.++..+   ...+                         
T Consensus         7 kP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~---~~~~-------------------------   58 (109)
T d1uc6a_           7 KPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLI---LDQW-------------------------   58 (109)
T ss_dssp             CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESS---SCCC-------------------------
T ss_pred             ECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecC---CCce-------------------------
Confidence            4689999998765  467899999998643   235678999888763   2223                         


Q ss_pred             cccccccccCCCCceeccCCCCCCeEEEEEEEEeccC--CCCCccceEEee
Q psy8774         260 LDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG--LGRLSGKVTVKV  308 (427)
Q Consensus       260 ~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G--~g~~s~~~~~~t  308 (427)
                          ........++++|.+|.+++.|.|+|+|.+..+  .|.+|.++..+|
T Consensus        59 ----~~~~~~~~~~~~i~~L~~~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt  105 (109)
T d1uc6a_          59 ----QHVELSNGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP  105 (109)
T ss_dssp             ----CCEEESSCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred             ----EEeccCCceeEEeCCCCCCCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence                334455677899999999999999999987542  355666555543

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=2e-11  Score=93.60  Aligned_cols=91  Identities=12%  Similarity=0.146  Sum_probs=70.4

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-------------E--------E----Eeeeee
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-------------I--------H----RNTTQT  145 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-------------~--------~----~~~~~~  145 (427)
                      .|.+|.+...++++|.|+|++|.. ..++.+.+|.|.|+........             .        .    .....+
T Consensus         4 ~plnl~~~~~sstsv~lsW~pP~~-~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
T d2dtge3           4 ELLKFSYIRTSFDKILLRWEPYWP-PDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP   82 (125)
T ss_dssp             CBCCCSEEEECSSCEEEECCCCCS-SSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred             CCEEEEEEEecCCEEEEEEeCCCc-cCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccC
Confidence            477999999999999999998853 3457899999999775322100             0        0    013468


Q ss_pred             EEEEccCCCCcEEEEEEEEeeCCCC-----CCCCCCeEEEcc
Q psy8774         146 KAVFSNLEEGIEYSAEVQAITKAGP-----GPWSPKLSLMTA  182 (427)
Q Consensus       146 ~~~i~~L~p~t~Y~~~V~a~~~~g~-----~~~s~~~~~~t~  182 (427)
                      ++.|.+|.|++.|.|+|+|+|..|.     |+.|+.+.++|.
T Consensus        83 ~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~  124 (125)
T d2dtge3          83 GWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD  124 (125)
T ss_dssp             EEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred             EEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence            8999999999999999999999985     678888888774

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=4.8e-10  Score=83.02  Aligned_cols=99  Identities=14%  Similarity=0.073  Sum_probs=65.7

Q ss_pred             ccCCCCCceEE-EeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccc
Q psy8774         184 DMVRAPLGVKA-LATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDE  262 (427)
Q Consensus       184 ~~p~~p~~l~~-~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (427)
                      -||.+|.++++ ...+.+++.|+|.++.+. +....|.+.|.................                      
T Consensus         3 ~PP~~P~~v~~i~~~~~~sv~~sW~p~~d~-~~~~~y~~~y~~~~~~~~~~~~~~~~~----------------------   59 (107)
T d1cd9b1           3 YPPASPSNLSCLMHLTTNSLVCQWEPGPET-HLPTSFILKSFRSRADCQYQGDTIPDC----------------------   59 (107)
T ss_dssp             CCCCCCEEEEEEEETTTTEEEEEEECCSCC-SSCCEEEEEEEECCGGGCSCCCEEEEE----------------------
T ss_pred             CccCCCcCCEEEEecCCCEEEEEEcCCCCC-CCCcceeEEEEEeecccceeeeeeeee----------------------
Confidence            47899999985 456788999999988744 444677777766532111110000000                      


Q ss_pred             ccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEe
Q psy8774         263 WSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK  307 (427)
Q Consensus       263 ~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~  307 (427)
                       ........+++.+.+|.+++.|.|+|.|.|..|.|. |..+.+.
T Consensus        60 -~~~~~~~~~~~~~~~L~~~t~Y~frV~A~N~~G~s~-S~~~~~~  102 (107)
T d1cd9b1          60 -VAKKRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSE-SPKLCLD  102 (107)
T ss_dssp             -ECCTTCCEEEEEGGGCCTTSCEEEEEEEEETTEEEE-CCCEEEC
T ss_pred             -ccccCccccEEEcCCCCcCceEEEEEEEEeCCcccc-CCCEEcc
Confidence             112234556889999999999999999999999875 5545543

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=5.1e-10  Score=81.95  Aligned_cols=79  Identities=18%  Similarity=0.316  Sum_probs=62.6

Q ss_pred             CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccc----------eeEeecCcceEEEcCCCCCceEEEEEEEEecc
Q psy8774           2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLK----------ENLVNSKNMSFLITNLERGVEYEFRIAGQNHI   71 (427)
Q Consensus         2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~----------~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~   71 (427)
                      +.++++++|.|+|++|   .+++.+|.|+|+..+...+          .........++.|.+|.|++.|.|+|+|.+..
T Consensus        12 v~~~t~~sv~v~W~pp---~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~~~V~a~~~~   88 (101)
T d2cuia1          12 VTDVTTSSLRLNWEAP---PGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGP   88 (101)
T ss_dssp             EESCCSSCEEEECCCC---TTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECSS
T ss_pred             EEEECCCEEEEEEEec---cccccceEEEEEecCCCceeeccCCcceeEeecccceeEEEeCCCCcCCEEEEEEEEEeCC
Confidence            4578899999999987   4678999999987653311          11125678899999999999999999999999


Q ss_pred             CcCcccceEEeC
Q psy8774          72 GYGQETVRYYTT   83 (427)
Q Consensus        72 g~~~~~~~~~~t   83 (427)
                      |.|.+......|
T Consensus        89 g~g~~~~~~~~T  100 (101)
T d2cuia1          89 HKADSIQGTART  100 (101)
T ss_dssp             SEEEEEEEEEEC
T ss_pred             cEeCCeEEEeEE
Confidence            998876666555

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=2.1e-09  Score=79.80  Aligned_cols=93  Identities=18%  Similarity=0.259  Sum_probs=66.4

Q ss_pred             CCCCCeeeEEEee--cCCEEEEEeeCCCCC-CCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEE
Q psy8774          88 PTGPPANISHHFQ--TPDVVCITWDPPLRT-HRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        88 p~~~p~~~~~~~~--~~~~v~v~W~~p~~~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a  164 (427)
                      -+.||.++.+...  +.+.+.|+|++|... ...+....|.++++...............+.+.|.+|.+++.|.|+|+|
T Consensus         7 kP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~rVrA   86 (109)
T d1uc6a_           7 KPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNGTAHTITDAYAGKEYIIQVAA   86 (109)
T ss_dssp             CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEESSCSEEEETTCCSSSCEEEEEEC
T ss_pred             ECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEeccCCceeEEeCCCCCCCEEEEEEEE
Confidence            3467899988754  567899999998532 3334567899999887444333344456789999999999999999999


Q ss_pred             eeCCCCC---CCCCCeEEEc
Q psy8774         165 ITKAGPG---PWSPKLSLMT  181 (427)
Q Consensus       165 ~~~~g~~---~~s~~~~~~t  181 (427)
                      .+. +.|   .+|..+.+++
T Consensus        87 ~~~-~~g~wS~WS~~~~~tt  105 (109)
T d1uc6a_          87 KDN-EIGTWSDWSVAAHATP  105 (109)
T ss_dssp             CBS-SSCCCCCCCEEEEECC
T ss_pred             EEC-CCCCcCCCCCCEEeEC
Confidence            875 433   4555555543

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=3e-09  Score=78.55  Aligned_cols=91  Identities=23%  Similarity=0.203  Sum_probs=64.5

Q ss_pred             CCCCCCCeeeEEE-eecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc---e-EEEe-----eeeeEEEEccCCCC
Q psy8774          86 GPPTGPPANISHH-FQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN---V-IHRN-----TTQTKAVFSNLEEG  155 (427)
Q Consensus        86 ~~p~~~p~~~~~~-~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~---~-~~~~-----~~~~~~~i~~L~p~  155 (427)
                      +.||.+|.++++. ....+++.|+|.++.  +.+.. ..|.+.|........   . ....     ...+++.+.+|.++
T Consensus         2 G~PP~~P~~v~~i~~~~~~sv~~sW~p~~--d~~~~-~~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~   78 (107)
T d1cd9b1           2 GYPPASPSNLSCLMHLTTNSLVCQWEPGP--ETHLP-TSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLY   78 (107)
T ss_dssp             CCCCCCCEEEEEEEETTTTEEEEEEECCS--CCSSC-CEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTT
T ss_pred             CCccCCCcCCEEEEecCCCEEEEEEcCCC--CCCCC-cceeEEEEEeecccceeeeeeeeeccccCccccEEEcCCCCcC
Confidence            4577899999854 567889999999883  44444 467777765421111   1 1111     23678889999999


Q ss_pred             cEEEEEEEEeeCCCCCCCCCCeEEE
Q psy8774         156 IEYSAEVQAITKAGPGPWSPKLSLM  180 (427)
Q Consensus       156 t~Y~~~V~a~~~~g~~~~s~~~~~~  180 (427)
                      +.|.|+|.|.|..|.+ .|..+.+.
T Consensus        79 t~Y~frV~A~N~~G~s-~S~~~~~~  102 (107)
T d1cd9b1          79 QYMAIWVQAENMLGSS-ESPKLCLD  102 (107)
T ss_dssp             SCEEEEEEEEETTEEE-ECCCEEEC
T ss_pred             ceEEEEEEEEeCCccc-cCCCEEcc
Confidence            9999999999999987 46666553

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=1.1e-09  Score=79.52  Aligned_cols=88  Identities=10%  Similarity=-0.006  Sum_probs=58.5

Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccc
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKS  267 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (427)
                      +|.|+++...+.+. .|+|++|...++.+  |.+++..........+..                           ....
T Consensus         3 ~P~nv~v~s~n~~~-~L~W~pP~~~g~~~--~~~~~~~~~~~~~~~~~~---------------------------~~~~   52 (98)
T d1fyhb1           3 TPTNVTIESYNMNP-IVYWEYQIMPQVPV--FTVEVKNYGVKNSEWIDA---------------------------CINI   52 (98)
T ss_dssp             CCEEEEEECBSSCC-EEEEECCCCSSCCE--EEEEEEETTCSSSCCEEE---------------------------EEEE
T ss_pred             cCCceEEEEeCCcE-EEEECCCCCCCCCc--eeEEEEEeccccceeEEe---------------------------eeec
Confidence            79999998876555 69999987665654  444444332111111100                           1112


Q ss_pred             cCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceE
Q psy8774         268 VPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT  305 (427)
Q Consensus       268 ~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~  305 (427)
                      ......+++.+|.++..|.|||+|.+..|.|.++..-.
T Consensus        53 ~~~~~~~~~~~l~~~~~Y~fRV~A~n~~g~S~ws~s~~   90 (98)
T d1fyhb1          53 SHHYCNISDHVGDPSNSLWVRVKARVGQKESAYAKSEE   90 (98)
T ss_dssp             SSSEEECGGGCCSTTSCEEEEEEEEETTEECCCEECCC
T ss_pred             ccceeeeEecccCCCCEEEEEEEEEcCCcccCCccCCC
Confidence            33445678899999999999999999999998887443

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=3e-09  Score=77.51  Aligned_cols=85  Identities=20%  Similarity=0.207  Sum_probs=54.0

Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK  266 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (427)
                      +|.+|.+.. +.+++.|+|.+|....+ .+..|+|+|+...... ...                             ...
T Consensus         7 ~Pp~l~v~~-~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~-~~~-----------------------------~~~   55 (100)
T d2gysa4           7 APPSLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATW-KDS-----------------------------KTE   55 (100)
T ss_dssp             CCCEEEEC----CCCEEEEEC--------CEEEEEEEECSSSCS-TTS-----------------------------CEE
T ss_pred             CCCccEEEE-CCCEEEEEEecCcccCCccceEEEEEEeecccce-ece-----------------------------eec
Confidence            344788766 45789999999885544 5678999998753211 111                             122


Q ss_pred             ccCCCCceeccCCCCCCeEEEEEEEEeccC--CCCCccc
Q psy8774         267 SVPLTESAELTSLEKFTEYAVAVAARTVNG--LGRLSGK  303 (427)
Q Consensus       267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G--~g~~s~~  303 (427)
                      .....++++|.+|.|++.|.|+|+|.+..|  .|.+|+.
T Consensus        56 ~~~~~~~~~l~~L~p~t~Y~~rVRa~~~~g~~~g~WSeW   94 (100)
T d2gysa4          56 TLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEW   94 (100)
T ss_dssp             EEESCSEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCC
T ss_pred             ccCCceEEEeCCCCCCCeEEEEEEEEECCCCCCCCccCC
Confidence            334567899999999999999999998776  3555554

>d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=4.4e-09  Score=75.44  Aligned_cols=86  Identities=13%  Similarity=0.024  Sum_probs=58.5

Q ss_pred             CCCCCceEEEeee-CcEEEEEeeeCCCCC----CceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774         186 VRAPLGVKALATS-DQSVEVWWKPVPAGR----GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL  260 (427)
Q Consensus       186 p~~p~~l~~~~~~-~~si~v~W~~p~~~~----g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (427)
                      |.||.||.+.... ++.+.|+|++|....    .....|+|.|+..+.   ..+                          
T Consensus         2 PdPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~---~~~--------------------------   52 (94)
T d3d85d3           2 PDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSK---REK--------------------------   52 (94)
T ss_dssp             CCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC----------------------------------
T ss_pred             CCCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCC---Ccc--------------------------
Confidence            6899999998764 467999999997432    247889999987632   233                          


Q ss_pred             ccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEE
Q psy8774         261 DEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV  306 (427)
Q Consensus       261 ~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~  306 (427)
                         .......   .++.+|.|++.|.|+|+|.+..|.|.+|+...+
T Consensus        53 ---~~~~~~~---~t~~~L~p~~~Y~v~VRa~~~~~~g~WSeWS~~   92 (94)
T d3d85d3          53 ---KDRVFTD---KTSATVICRKNASISVRAQDRYYSSSWSEWASV   92 (94)
T ss_dssp             ----CEEEES---SSEEEECCCSSCEEEEEEEESSSCCCCCCCEEE
T ss_pred             ---EEecccc---ceEEEecCCCCEEEEEEEecCCCCCCCccCcCC
Confidence               1111112   223458899999999999999888898886543

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.1e-08  Score=74.36  Aligned_cols=85  Identities=16%  Similarity=0.256  Sum_probs=54.7

Q ss_pred             CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce--EEEeeeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV--IHRNTTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      ++.|| +|.+.. +.+++.|+|.+|... ....+..|.|+|+........  .......+.+.|.+|.|++.|.|+|+|.
T Consensus         5 k~~Pp-~l~v~~-~~~s~~l~W~~P~~~-~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rVRa~   81 (100)
T d2gysa4           5 QMAPP-SLQVTK-DGDSYSLRWETMKMR-YEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVR   81 (100)
T ss_dssp             CCCCC-EEEEC----CCCEEEEEC---------CEEEEEEEECSSSCSTTSCEEEEESCSEEECCCCCSSCCCEEEEEEE
T ss_pred             cCCCC-ccEEEE-CCCEEEEEEecCccc-CCccceEEEEEEeecccceeceeecccCCceEEEeCCCCCCCeEEEEEEEE
Confidence            44556 787765 557899999988522 222456899999876433222  2223457899999999999999999999


Q ss_pred             eCCCC--CCCCC
Q psy8774         166 TKAGP--GPWSP  175 (427)
Q Consensus       166 ~~~g~--~~~s~  175 (427)
                      +..|.  |.+|+
T Consensus        82 ~~~g~~~g~WSe   93 (100)
T d2gysa4          82 TSRTGYNGIWSE   93 (100)
T ss_dssp             ECCTTCCBCCCC
T ss_pred             ECCCCCCCCccC
Confidence            87764  44444

>d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=6.6e-08  Score=69.09  Aligned_cols=87  Identities=18%  Similarity=0.183  Sum_probs=57.3

Q ss_pred             CCCeeeEEEee-cCCEEEEEeeCCCCCCC--CcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEee
Q psy8774          90 GPPANISHHFQ-TPDVVCITWDPPLRTHR--NGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAIT  166 (427)
Q Consensus        90 ~~p~~~~~~~~-~~~~v~v~W~~p~~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~  166 (427)
                      .||.+|.+... +++.+.|+|++|.....  +.....|.|+|+..+. ..+.......  .++.+|.|++.|.|+|+|.+
T Consensus         3 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~-~~~~~~~~~~--~t~~~L~p~~~Y~v~VRa~~   79 (94)
T d3d85d3           3 DPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSK-REKKDRVFTD--KTSATVICRKNASISVRAQD   79 (94)
T ss_dssp             CCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC-------CEEEES--SSEEEECCCSSCEEEEEEEE
T ss_pred             CCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCC-CccEEecccc--ceEEEecCCCCEEEEEEEec
Confidence            57999998865 45679999999963222  2236789999987632 2222222221  12345789999999999999


Q ss_pred             CCCCCCCCCCeEE
Q psy8774         167 KAGPGPWSPKLSL  179 (427)
Q Consensus       167 ~~g~~~~s~~~~~  179 (427)
                      ..+.|.+|+...+
T Consensus        80 ~~~~g~WSeWS~~   92 (94)
T d3d85d3          80 RYYSSSWSEWASV   92 (94)
T ss_dssp             SSSCCCCCCCEEE
T ss_pred             CCCCCCCccCcCC
Confidence            8888888887654

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=2.9e-08  Score=71.73  Aligned_cols=84  Identities=11%  Similarity=0.090  Sum_probs=56.1

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc-eEE--Ee--eeeeEEEEccCCCCcEEEEEEEEe
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN-VIH--RN--TTQTKAVFSNLEEGIEYSAEVQAI  165 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~-~~~--~~--~~~~~~~i~~L~p~t~Y~~~V~a~  165 (427)
                      +|.+|++...+.. ..|+|++|.  ..++..  |.+++...+.... +..  ..  .....+.+.+|.++..|.|||+|.
T Consensus         3 ~P~nv~v~s~n~~-~~L~W~pP~--~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~fRV~A~   77 (98)
T d1fyhb1           3 TPTNVTIESYNMN-PIVYWEYQI--MPQVPV--FTVEVKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRVKAR   77 (98)
T ss_dssp             CCEEEEEECBSSC-CEEEEECCC--CSSCCE--EEEEEEETTCSSSCCEEEEEEESSSEEECGGGCCSTTSCEEEEEEEE
T ss_pred             cCCceEEEEeCCc-EEEEECCCC--CCCCCc--eeEEEEEeccccceeEEeeeecccceeeeEecccCCCCEEEEEEEEE
Confidence            5899999887654 469999984  444444  4444444322222 221  22  234556677899999999999999


Q ss_pred             eCCCCCCCCCCeEE
Q psy8774         166 TKAGPGPWSPKLSL  179 (427)
Q Consensus       166 ~~~g~~~~s~~~~~  179 (427)
                      |..|.|.+++...|
T Consensus        78 n~~g~S~ws~s~~f   91 (98)
T d1fyhb1          78 VGQKESAYAKSEEF   91 (98)
T ss_dssp             ETTEECCCEECCCB
T ss_pred             cCCcccCCccCCCc
Confidence            99999887765443

>d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-10 receptor 1, IL-10R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=4.5e-08  Score=70.74  Aligned_cols=86  Identities=16%  Similarity=0.186  Sum_probs=59.0

Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccc
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKS  267 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (427)
                      +|.++++... +....|+|++|...+ ....|.|+|+...   ...|.....+                        ...
T Consensus         6 ~P~nv~~~s~-n~~~~L~W~pp~~~g-~~~~Y~Ve~~~~~---~~~W~~v~~c------------------------~~~   56 (99)
T d1y6kr1           6 SPPSVWFEAE-FFHHILHWTPIPQQS-ESTCYEVALLRYG---IESWNSISQC------------------------SQT   56 (99)
T ss_dssp             CCSCEEEEEE-TTEEEEEECCCTTCC-TTCEEEEEEEETT---SCCCEEEEEE------------------------ESS
T ss_pred             CCCcceEEEE-CCEEEEEEcCCCCcC-CCCEEEEEEEECC---CcceEEEEee------------------------ccc
Confidence            5779998665 456779999887544 3467999998763   3344211000                        001


Q ss_pred             cCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774         268 VPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG  302 (427)
Q Consensus       268 ~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~  302 (427)
                      ......+.+.+|.++..|.|||+|.+..|.|.++.
T Consensus        57 t~~~~~~~~~~l~~~~~Y~fRVrA~n~~g~S~Ws~   91 (99)
T d1y6kr1          57 LSYDLTAVTLDLYHSNGYRARVRAVDGSRHSQWTV   91 (99)
T ss_dssp             SEEECGGGGTTGGGSSCEEEEEEEEETTEECCCEE
T ss_pred             cccceeeeeeecCCCCEEEEEEEEEcCCCcCCCcc
Confidence            11234566889999999999999999999888865

>d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-10 receptor 1, IL-10R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=2.9e-07  Score=66.27  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=55.8

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeE----EEEccCCCCcEEEEEEEE
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTK----AVFSNLEEGIEYSAEVQA  164 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~----~~i~~L~p~t~Y~~~V~a  164 (427)
                      +|.+|++.+.+ ....|+|++|.  .. +....|.|+++..+ ...|....  ...+.    +.+.+|.++..|.|||+|
T Consensus         6 ~P~nv~~~s~n-~~~~L~W~pp~--~~-g~~~~Y~Ve~~~~~-~~~W~~v~~c~~~t~~~~~~~~~~l~~~~~Y~fRVrA   80 (99)
T d1y6kr1           6 SPPSVWFEAEF-FHHILHWTPIP--QQ-SESTCYEVALLRYG-IESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVRA   80 (99)
T ss_dssp             CCSCEEEEEET-TEEEEEECCCT--TC-CTTCEEEEEEEETT-SCCCEEEEEEESSSEEECGGGGTTGGGSSCEEEEEEE
T ss_pred             CCCcceEEEEC-CEEEEEEcCCC--Cc-CCCCEEEEEEEECC-CcceEEEEeeccccccceeeeeeecCCCCEEEEEEEE
Confidence            47799987655 46789999884  22 33457999998763 23343322  22222    346788999999999999


Q ss_pred             eeCCCCCCCCC
Q psy8774         165 ITKAGPGPWSP  175 (427)
Q Consensus       165 ~~~~g~~~~s~  175 (427)
                      .|..|.|.++.
T Consensus        81 ~n~~g~S~Ws~   91 (99)
T d1y6kr1          81 VDGSRHSQWTV   91 (99)
T ss_dssp             EETTEECCCEE
T ss_pred             EcCCCcCCCcc
Confidence            99999887754

>d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=97.41  E-value=0.00035  Score=50.53  Aligned_cols=33  Identities=21%  Similarity=0.339  Sum_probs=26.9

Q ss_pred             CceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         272 ESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       272 ~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                      ..+.|++|+|++.|.++|      |.+.+|....|+|+|
T Consensus        80 h~v~Lt~L~P~T~Y~YrV------G~~~~S~~~~F~T~P  112 (112)
T d2qfra1          80 HHTTIRKLKYNTKYYYEV------GLRNTTRRFSFITPP  112 (112)
T ss_dssp             EEEEECSCCTTCEEEEEE------CCSSSCEEEEEECCC
T ss_pred             EEEEECCCCCCCEEEEEE------CCCCceeeEEEEcCC
Confidence            467899999999999998      334578888999854

>d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=97.21  E-value=0.0018  Score=46.61  Aligned_cols=80  Identities=15%  Similarity=0.223  Sum_probs=50.6

Q ss_pred             CCCeeeEEEeec--CCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe------------eeeeEEEEccCCCC
Q psy8774          90 GPPANISHHFQT--PDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN------------TTQTKAVFSNLEEG  155 (427)
Q Consensus        90 ~~p~~~~~~~~~--~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p~  155 (427)
                      .+|..+++....  .+++.|+|....  ...    .-.|+|....+........            .-...+.|++|.|+
T Consensus        17 ~~P~qvhlt~~~~~~tsm~VsW~T~~--~~~----~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~   90 (112)
T d2qfra1          17 NAPQQVHITQGDLVGRAMIISWVTMD--EPG----SSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYN   90 (112)
T ss_dssp             TCCEEEEEEECSSSSSCEEEEEEESS--SCC----CCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTT
T ss_pred             CCCccEEEeCcCCCCCEEEEEEECCC--CCC----CcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCC
Confidence            358888877643  579999998652  211    2344555442222221110            11457899999999


Q ss_pred             cEEEEEEEEeeCCCCCCCCCCeEEEc
Q psy8774         156 IEYSAEVQAITKAGPGPWSPKLSLMT  181 (427)
Q Consensus       156 t~Y~~~V~a~~~~g~~~~s~~~~~~t  181 (427)
                      +.|.++|      |.+.+|+...|+|
T Consensus        91 T~Y~YrV------G~~~~S~~~~F~T  110 (112)
T d2qfra1          91 TKYYYEV------GLRNTTRRFSFIT  110 (112)
T ss_dssp             CEEEEEE------CCSSSCEEEEEEC
T ss_pred             CEEEEEE------CCCCceeeEEEEc
Confidence            9999998      3334788888887

>d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Sweet potato (Ipomoea batatas) [TaxId: 4120]

Probab=97.12  E-value=0.00054  Score=50.10  Aligned_cols=33  Identities=21%  Similarity=0.312  Sum_probs=26.3

Q ss_pred             CceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774         272 ESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP  310 (427)
Q Consensus       272 ~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~  310 (427)
                      ++..|++|+|++.|.++|      |.+.+|....|+|.|
T Consensus        87 H~v~LtgL~P~T~Y~YrV------G~~~~S~~~~F~T~P  119 (119)
T d1xzwa1          87 HHCTIKDLEYDTKYYYRL------GFGDAKRQFWFVTPP  119 (119)
T ss_dssp             EEEEECCCCTTCEEEEEE------CCGGGCEEEEEECCC
T ss_pred             EEEEECCCCCCCEEEEEE------CCCCccceEEEeCCC
Confidence            468899999999999998      233467888888854

>d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Sweet potato (Ipomoea batatas) [TaxId: 4120]

Probab=96.79  E-value=0.0035  Score=45.61  Aligned_cols=81  Identities=14%  Similarity=0.187  Sum_probs=50.3

Q ss_pred             CCeeeEEEeec--CCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe------------eeeeEEEEccCCCCc
Q psy8774          91 PPANISHHFQT--PDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN------------TTQTKAVFSNLEEGI  156 (427)
Q Consensus        91 ~p~~~~~~~~~--~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p~t  156 (427)
                      +|..+++...+  .+++.|+|...... ....    .|+|....+........            .-...+.|++|.|++
T Consensus        24 ~P~qvhl~~~~~~~tsm~VsW~T~~~~-~~~~----~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T   98 (119)
T d1xzwa1          24 APQQVHITQGDYEGRGVIISWTTPYDK-AGAN----KVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDT   98 (119)
T ss_dssp             CCEEEEEEECSSSSSCEEEEEEESSCC-TTTT----EEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTC
T ss_pred             CCCEEEEEecCCCCCEEEEEEECCCCC-CCCC----EEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCC
Confidence            57788777543  57899999975311 1111    55665553222221110            113578999999999


Q ss_pred             EEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774         157 EYSAEVQAITKAGPGPWSPKLSLMTA  182 (427)
Q Consensus       157 ~Y~~~V~a~~~~g~~~~s~~~~~~t~  182 (427)
                      .|.++|-      .+.+|....|+|.
T Consensus        99 ~Y~YrVG------~~~~S~~~~F~T~  118 (119)
T d1xzwa1          99 KYYYRLG------FGDAKRQFWFVTP  118 (119)
T ss_dssp             EEEEEEC------CGGGCEEEEEECC
T ss_pred             EEEEEEC------CCCccceEEEeCC
Confidence            9999982      2236778888873

>d1f6fb1 b.1.2.1 (B:5-100) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.61  E-value=0.011  Score=41.09  Aligned_cols=84  Identities=17%  Similarity=0.205  Sum_probs=58.0

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-e---eeeeEEEEc--cCCCCcEEEEEEEE
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-N---TTQTKAVFS--NLEEGIEYSAEVQA  164 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~---~~~~~~~i~--~L~p~t~Y~~~V~a  164 (427)
                      .|+++.+...+...+.++|++..  +. ..-..|.+.|+..... .+... .   ....++.+.  .+.....|.|.|.|
T Consensus         2 kP~~~sC~s~~~~~~~C~W~~G~--~t-~L~T~Y~l~~~~~~~~-~~~eCp~y~~~~~~~C~f~~~~~~~~~~y~i~V~a   77 (96)
T d1f6fb1           2 KPEIHKCRSPDKETFTCWWNPGT--DG-GLPTNYSLTYSKEGEK-TTYECPDYKTSGPNSCFFSKQYTSIWKIYIITVNA   77 (96)
T ss_dssp             CCEEEEEEBSSSSCEEEEEECCC--CT-TSCCEEEEEEEETTEE-EEEECSCSSTTCTTEEEECTTTCCSSCEEEEEEEE
T ss_pred             CCeEeEEEeCCCCEEEEEeeCCC--cC-CcCceEEEEEEecCCC-ccccCCcccCCCceeEEECCccCccceEEEEEEEE
Confidence            58899999888889999999863  22 2346899999865221 11111 1   224566664  46788999999999


Q ss_pred             eeCCCCCCCCCCeEE
Q psy8774         165 ITKAGPGPWSPKLSL  179 (427)
Q Consensus       165 ~~~~g~~~~s~~~~~  179 (427)
                      .|..|.. .|+.+.+
T Consensus        78 ~N~LG~~-~Sd~l~~   91 (96)
T d1f6fb1          78 TNQMGSS-SSDPLYV   91 (96)
T ss_dssp             EETTEEE-ECCCEEE
T ss_pred             EcCCCCc-ccccEEE
Confidence            9998875 5666544

>d2hfta1 b.1.2.1 (A:1-106) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.018  Score=40.48  Aligned_cols=76  Identities=16%  Similarity=0.171  Sum_probs=53.8

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEcc-C--CCCcEEEEEEEEeeC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSN-L--EEGIEYSAEVQAITK  167 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~-L--~p~t~Y~~~V~a~~~  167 (427)
                      +|.||++.+.+ -.-.|.|++++      .-..|.|+|...++.-...+.....+.|.|.+ +  .....|.+||+|...
T Consensus         8 ~p~NV~~~S~N-f~~iL~W~p~~------~~~~YtVqy~~~~~~W~~~C~nit~~~CDlt~~~~~d~~~~Y~aRVrA~~~   80 (106)
T d2hfta1           8 AAYNLTWKSTN-FKTILEWEPKP------VNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPA   80 (106)
T ss_dssp             CCEEEEEEEET-TEEEEEEECCC------SSEEEEEEEEETTSCCEEEEEEESCSEEECHHHHGGGTTSCEEEEEEEEEC
T ss_pred             cceEEEEEEEc-CeEEEEECCCC------CCEEEEEEEEEcCCchhhcccCcCccccccccccccCCCCCEEEEEEEEcC
Confidence            68999988755 47789999863      23469999987743322233445688899876 3  467889999999977


Q ss_pred             CCCCCC
Q psy8774         168 AGPGPW  173 (427)
Q Consensus       168 ~g~~~~  173 (427)
                      .+.+.+
T Consensus        81 ~~~S~~   86 (106)
T d2hfta1          81 GNVEST   86 (106)
T ss_dssp             SSCCCC
T ss_pred             CCcccc
Confidence            665543

>d1a21a1 b.1.2.1 (A:4-106) Extracellular region of human tissue factor {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.45  E-value=0.02  Score=40.05  Aligned_cols=75  Identities=16%  Similarity=0.273  Sum_probs=51.2

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEcc--CCC-CcEEEEEEEEee
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSN--LEE-GIEYSAEVQAIT  166 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~--L~p-~t~Y~~~V~a~~  166 (427)
                      +.|.|+++.+.+ -...|.|+++.      .-..|.|+|...++.-...+.....+.|.|++  |.+ ...|.+||+|..
T Consensus         2 ~k~~NV~~~S~N-f~~iL~W~p~~------~~~~YtVqy~~~~~~W~~~C~nit~~~CDlt~~~~~~~~~~Y~aRVra~~   74 (103)
T d1a21a1           2 GRAYNLTWKSTN-FKTILEWEPKS------IDHVYTVQISTRLENWKSKCFLTAETECDLTDEVVKDVGQTYMARVLSYP   74 (103)
T ss_dssp             CCCEEEEEEEET-TEEEEEEECCC------SSEEEEEEEECSSSCCEEEEEEESSSEEECHHHHTTCTTSCBEEEEEEEE
T ss_pred             CCCEEEEEEEEc-CceEEEECCCC------CCeEEEEEEEecCCCccccccCcCcceecCcccccccCCCCEEEEEEEec
Confidence            458899988755 46789999863      22469999987633222223445688899975  445 478999999997


Q ss_pred             CCCCC
Q psy8774         167 KAGPG  171 (427)
Q Consensus       167 ~~g~~  171 (427)
                      ..+.+
T Consensus        75 ~~~~s   79 (103)
T d1a21a1          75 ARNGN   79 (103)
T ss_dssp             CCC--
T ss_pred             CCCcc
Confidence            76554

>d2c4fu1 b.1.2.1 (U:91-210) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0087  Score=43.15  Aligned_cols=65  Identities=17%  Similarity=0.166  Sum_probs=45.5

Q ss_pred             ceEEEeeeCcEEEEEeeeCCC---CCC----------ceeEEEEEEEecccccccccccccccccccccceeEEeeeccc
Q psy8774         191 GVKALATSDQSVEVWWKPVPA---GRG----------KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAV  257 (427)
Q Consensus       191 ~l~~~~~~~~si~v~W~~p~~---~~g----------~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (427)
                      .+.+....+.+|.|.-.+|..   .++          .-..|.|.|+..+..   ..                       
T Consensus        22 ~v~~~~~~~~sl~V~i~~P~t~~~~~~~~~~~~d~~~~~l~Y~V~~w~~~s~---~~-----------------------   75 (116)
T d2c4fu1          22 TIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWSGKKT---AK-----------------------   75 (116)
T ss_dssp             CEEEEEEETTEEEEEECCCEEEEESSSCEEEHHHHHGGGCEEEEEECCCCEE---EE-----------------------
T ss_pred             eEEEEecCCCEEEEEEeCCCCcccCCCceeehhhhccCCcEEEEEEEECCce---EE-----------------------
Confidence            566666667899999988852   112          125799999876321   10                       


Q ss_pred             cccccccccccCCCCceeccCCCCCCeEEEEEEEEe
Q psy8774         258 EDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAART  293 (427)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~  293 (427)
                                  ....+.|.+|.|++.|+|+|+|.-
T Consensus        76 ------------~~~~~~l~~L~p~t~YCv~Vqa~i   99 (116)
T d2c4fu1          76 ------------TNTNEFLIDVDKGENYCFSVQAVI   99 (116)
T ss_dssp             ------------ESSSEEEEECCTTCCCEEEEEEEC
T ss_pred             ------------EeeeEEEeCCCCCCcEEEEEEEEe
Confidence                        123567999999999999999983

>d2hyma1 b.1.2.1 (A:1-109) Interferon-alpha/beta receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-alpha/beta receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.027  Score=39.79  Aligned_cols=73  Identities=10%  Similarity=0.140  Sum_probs=52.3

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEcc--CCCCcEEEEEEEE
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSN--LEEGIEYSAEVQA  164 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~--L~p~t~Y~~~V~a  164 (427)
                      .|.++++...+ -.-.|.|++..  . ...-..|.|+|+..+....|...    ....+.|.|++  +.+...|.++|+|
T Consensus        10 ~P~nv~i~s~N-f~~iL~W~p~~--~-s~~~~~YtVqy~~~~~~~~W~~v~~C~~it~t~CDLT~e~~~~~~~Y~~RV~A   85 (109)
T d2hyma1          10 ESCTFKISLRN-FRSILSWELKN--H-SIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEG   85 (109)
T ss_dssp             CCCEEEEEESS-SCEEEEEECCC--S-SCCCCEEEEEEEETTCTTCCEECSSSSSBSCSEEECTTTCCCSSSCEEEEEEE
T ss_pred             CCeeEEEEEEC-CceEEEECCCC--C-CCCCeEEEEEEEEEcccccCccchhhhCCCCCeEeCchhhccCCccEEEEEEE
Confidence            47788877644 46789999873  2 23455899999876444445443    35688899987  4578889999999


Q ss_pred             eeC
Q psy8774         165 ITK  167 (427)
Q Consensus       165 ~~~  167 (427)
                      ..+
T Consensus        86 ~~G   88 (109)
T d2hyma1          86 FSG   88 (109)
T ss_dssp             EET
T ss_pred             EcC
Confidence            954

>d1f6fb1 b.1.2.1 (B:5-100) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.02  E-value=0.025  Score=39.05  Aligned_cols=81  Identities=19%  Similarity=0.283  Sum_probs=53.5

Q ss_pred             CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccc
Q psy8774         188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKS  267 (427)
Q Consensus       188 ~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (427)
                      .|+++.+...+...+..+|++-... ..-..|.+.|+........+.   .                          ...
T Consensus         2 kP~~~sC~s~~~~~~~C~W~~G~~t-~L~T~Y~l~~~~~~~~~~~eC---p--------------------------~y~   51 (96)
T d1f6fb1           2 KPEIHKCRSPDKETFTCWWNPGTDG-GLPTNYSLTYSKEGEKTTYEC---P--------------------------DYK   51 (96)
T ss_dssp             CCEEEEEEBSSSSCEEEEEECCCCT-TSCCEEEEEEEETTEEEEEEC---S--------------------------CSS
T ss_pred             CCeEeEEEeCCCCEEEEEeeCCCcC-CcCceEEEEEEecCCCccccC---C--------------------------ccc
Confidence            5788888888888999999986532 345789999986532221111   0                          011


Q ss_pred             cCCCCc--eeccCCCCCCeEEEEEEEEeccCCC
Q psy8774         268 VPLTES--AELTSLEKFTEYAVAVAARTVNGLG  298 (427)
Q Consensus       268 ~~~~~~--~~l~~L~p~t~Y~~~V~a~~~~G~g  298 (427)
                      ....++  +....+.....|.|.|.|.|.-|..
T Consensus        52 ~~~~~~C~f~~~~~~~~~~y~i~V~a~N~LG~~   84 (96)
T d1f6fb1          52 TSGPNSCFFSKQYTSIWKIYIITVNATNQMGSS   84 (96)
T ss_dssp             TTCTTEEEECTTTCCSSCEEEEEEEEEETTEEE
T ss_pred             CCCceeEEECCccCccceEEEEEEEEEcCCCCc
Confidence            122233  4445677888999999999988753

>d2hyma1 b.1.2.1 (A:1-109) Interferon-alpha/beta receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-alpha/beta receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.67  E-value=0.026  Score=39.88  Aligned_cols=60  Identities=13%  Similarity=0.068  Sum_probs=44.5

Q ss_pred             EEEeeCCCCCCCcceEeEEEEEEec-CccceeEe---ecCcceEEEcC--CCCCceEEEEEEEEecc
Q psy8774          11 ELVWSQPTQTYGEILGYRVKYGVRE-HTLKENLV---NSKNMSFLITN--LERGVEYEFRIAGQNHI   71 (427)
Q Consensus        11 ~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~---~~~~~~~~~~~--L~p~t~Y~~~V~a~~~~   71 (427)
                      .|+|++... ......|.|+|+.-+ ...|....   ....+.|.|++  +.+...|.+||+|..+.
T Consensus        24 iL~W~p~~~-s~~~~~YtVqy~~~~~~~~W~~v~~C~~it~t~CDLT~e~~~~~~~Y~~RV~A~~G~   89 (109)
T d2hyma1          24 ILSWELKNH-SIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLEGFSGN   89 (109)
T ss_dssp             EEEEECCCS-SCCCCEEEEEEEETTCTTCCEECSSSSSBSCSEEECTTTCCCSSSCEEEEEEEEETT
T ss_pred             EEEECCCCC-CCCCeEEEEEEEEEcccccCccchhhhCCCCCeEeCchhhccCCccEEEEEEEEcCC
Confidence            689998753 234468999998644 34577653   66788899987  56788899999999653

>d2c4fu1 b.1.2.1 (U:91-210) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.019  Score=41.26  Aligned_cols=69  Identities=22%  Similarity=0.376  Sum_probs=46.6

Q ss_pred             CCCeeeEEEeecCCEEEEEeeCCCC---CCCC--------cceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEE
Q psy8774          90 GPPANISHHFQTPDVVCITWDPPLR---THRN--------GQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEY  158 (427)
Q Consensus        90 ~~p~~~~~~~~~~~~v~v~W~~p~~---~~~~--------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y  158 (427)
                      +|| .+.+......++.|.-.+|..   .+..        +.-..|.|.|+..  +...    .......|.+|.|++.|
T Consensus        19 GPP-~v~~~~~~~~sl~V~i~~P~t~~~~~~~~~~~~d~~~~~l~Y~V~~w~~--~s~~----~~~~~~~l~~L~p~t~Y   91 (116)
T d2c4fu1          19 GQP-TIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWSG--KKTA----KTNTNEFLIDVDKGENY   91 (116)
T ss_dssp             CCC-CEEEEEEETTEEEEEECCCEEEEESSSCEEEHHHHHGGGCEEEEEECCC--CEEE----EESSSEEEEECCTTCCC
T ss_pred             CCc-eEEEEecCCCEEEEEEeCCCCcccCCCceeehhhhccCCcEEEEEEEEC--CceE----EEeeeEEEeCCCCCCcE
Confidence            445 566666666789888888731   1111        1235799999876  2221    23455789999999999


Q ss_pred             EEEEEEe
Q psy8774         159 SAEVQAI  165 (427)
Q Consensus       159 ~~~V~a~  165 (427)
                      .|+|+|.
T Consensus        92 Cv~Vqa~   98 (116)
T d2c4fu1          92 CFSVQAV   98 (116)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
Confidence            9999997

>d2hfta1 b.1.2.1 (A:1-106) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.15  E-value=0.09  Score=36.75  Aligned_cols=61  Identities=11%  Similarity=0.079  Sum_probs=44.1

Q ss_pred             EEEEeeCCCCCCCcceEeEEEEEEecCccceeE-eecCcceEEEcC-C--CCCceEEEEEEEEeccCcCc
Q psy8774          10 IELVWSQPTQTYGEILGYRVKYGVREHTLKENL-VNSKNMSFLITN-L--ERGVEYEFRIAGQNHIGYGQ   75 (427)
Q Consensus        10 v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~~-L--~p~t~Y~~~V~a~~~~g~~~   75 (427)
                      -.|+|+++.    ....|.|+|+..++ .|... .....+.|.|++ +  .....|.+||+|....+.+.
T Consensus        21 ~iL~W~p~~----~~~~YtVqy~~~~~-~W~~~C~nit~~~CDlt~~~~~d~~~~Y~aRVrA~~~~~~S~   85 (106)
T d2hfta1          21 TILEWEPKP----VNQVYTVQISTKSG-DWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVES   85 (106)
T ss_dssp             EEEEEECCC----SSEEEEEEEEETTS-CCEEEEEEESCSEEECHHHHGGGTTSCEEEEEEEEECSSCCC
T ss_pred             EEEEECCCC----CCEEEEEEEEEcCC-chhhcccCcCccccccccccccCCCCCEEEEEEEEcCCCccc
Confidence            468999863    23569999987654 46432 267788898875 3  45778999999998776664

>d1a21a1 b.1.2.1 (A:4-106) Extracellular region of human tissue factor {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.96  E-value=0.093  Score=36.44  Aligned_cols=62  Identities=15%  Similarity=0.114  Sum_probs=43.0

Q ss_pred             EEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcC--CCC-CceEEEEEEEEeccCcCc
Q psy8774           9 TIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITN--LER-GVEYEFRIAGQNHIGYGQ   75 (427)
Q Consensus         9 sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~--L~p-~t~Y~~~V~a~~~~g~~~   75 (427)
                      .-.|.|+++.    ....|.|+|+..++ .|...- ....+.|.|++  |.+ ...|.+||+|....+.+.
T Consensus        15 ~~iL~W~p~~----~~~~YtVqy~~~~~-~W~~~C~nit~~~CDlt~~~~~~~~~~Y~aRVra~~~~~~s~   80 (103)
T d1a21a1          15 KTILEWEPKS----IDHVYTVQISTRLE-NWKSKCFLTAETECDLTDEVVKDVGQTYMARVLSYPARNGNT   80 (103)
T ss_dssp             EEEEEEECCC----SSEEEEEEEECSSS-CCEEEEEEESSSEEECHHHHTTCTTSCBEEEEEEEECCC--C
T ss_pred             ceEEEECCCC----CCeEEEEEEEecCC-CccccccCcCcceecCcccccccCCCCEEEEEEEecCCCccc
Confidence            3468999863    23579999986544 564322 67788899875  445 467999999998776553

>d2gysa3 b.1.2.1 (A:218-316) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.96  E-value=1.8  Score=28.32  Aligned_cols=73  Identities=15%  Similarity=0.222  Sum_probs=44.1

Q ss_pred             CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC------ceEEEe-----------eeeeEEEEccCC
Q psy8774          91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN------NVIHRN-----------TTQTKAVFSNLE  153 (427)
Q Consensus        91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~------~~~~~~-----------~~~~~~~i~~L~  153 (427)
                      .|+||++...+...+.++|+.-.  ... .-..|-+.|+...+..      ...+..           .-..++.+.+-.
T Consensus         3 qPrNLqC~FdG~~~LsCSWEV~~--~Vt-~SVsFgLfYk~~P~ag~a~l~re~eCsPv~ke~~~spyv~~~Cqi~V~dp~   79 (99)
T d2gysa3           3 QPQNLECFFDGAAVLSCSWEVRK--EVA-SSVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPA   79 (99)
T ss_dssp             SCEEEEEEECSSSEEEEEEEEEH--HHH-TTCCEEEEEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTT
T ss_pred             CccceEEEeCCcceEEEEEEEee--eEe-eeEEEEEEeccCcccccccccchhccChhhhccCCCceEEEEeeeeCCCcc
Confidence            58999999999999999998652  111 2236889998664332      111111           113334455666


Q ss_pred             CCcEEEEEEEEee
Q psy8774         154 EGIEYSAEVQAIT  166 (427)
Q Consensus       154 p~t~Y~~~V~a~~  166 (427)
                      ...+|.++|+...
T Consensus        80 ~hsqY~VsVrp~e   92 (99)
T d2gysa3          80 THGQYIVSVQPRR   92 (99)
T ss_dssp             TCCEEEEEEEECC
T ss_pred             ccceEEEEEEecc
Confidence            6777777777653

>d1edqa1 b.1.18.2 (A:24-132) Chitinase A, N-terminal domain N {Serratia marcescens [TaxId: 615]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Chitinase A, N-terminal domain N
species: Serratia marcescens [TaxId: 615]

Probab=82.60  E-value=1.8  Score=29.69  Aligned_cols=66  Identities=11%  Similarity=0.084  Sum_probs=40.1

Q ss_pred             cceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcc
Q psy8774           6 PEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQE   76 (427)
Q Consensus         6 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~   76 (427)
                      ..-.|.|+|+...  +..-..|+|.+.  +...|.-..........+. ...+-.|+++|..+|..|.+.+
T Consensus        35 ~~v~v~VswN~Ws--G~~Gd~~~v~~d--g~~V~~g~~~~~~~~a~f~-v~kgG~y~m~V~LcN~~Gcs~S  100 (109)
T d1edqa1          35 NAADVSVSWNLWN--GDTGTTAKVLLN--GKEAWSGPSTGSSGTANFK-VNKGGRYQMQVALCNADGCTAS  100 (109)
T ss_dssp             SSEEEEEEEECCS--SCCCSEEEEEET--TEEEEEEECCSSEEEEEEE-ECSCEEEEEEEEEEETTEEEEC
T ss_pred             cceEEEEEEEEec--CCCCcEEEEEEC--CEEEEeccCCcCceEEEEE-ecCCCEEEEEEEEEcCCCcccc
Confidence            4456899999986  334467887742  2112322212233334443 3666789999999999986643

>d1axib1 b.1.2.1 (B:32-130) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.21  E-value=2  Score=29.12  Aligned_cols=75  Identities=9%  Similarity=0.166  Sum_probs=43.8

Q ss_pred             CeeeEEEeecCCEEEEEeeCCCCC--CCCcc-eeEEEEEEEEccCCCceEEE---eeeeeEEEEc--cCCCCcEEEEEEE
Q psy8774          92 PANISHHFQTPDVVCITWDPPLRT--HRNGQ-IVLYNVKFHKKIDANNVIHR---NTTQTKAVFS--NLEEGIEYSAEVQ  163 (427)
Q Consensus        92 p~~~~~~~~~~~~v~v~W~~p~~~--~~~~~-i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~i~--~L~p~t~Y~~~V~  163 (427)
                      |.++.+.......++..|++....  ...+. -..|.+.++..........-   ....+++.+.  .+...+.|.|.|+
T Consensus         2 P~~~~C~s~~~etftC~W~pG~~~~l~~~~~l~~~Y~~~~~~~~~~~~~eCpdY~~~~~nsC~F~~~~tsiw~~Y~i~v~   81 (99)
T d1axib1           2 PKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPYCIKLT   81 (99)
T ss_dssp             CCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEEEEEEE
T ss_pred             CeeeeEecCCCcEEEEEecCCCcCCCCCCCceeEEEEEeccccCCCccccCcCCccCCccceEeCCcccceeeEEEEEEE
Confidence            778899988999999999976421  01112 22466665544212111111   1235667774  4889999999999


Q ss_pred             Eee
Q psy8774         164 AIT  166 (427)
Q Consensus       164 a~~  166 (427)
                      |.|
T Consensus        82 a~n   84 (99)
T d1axib1          82 SNG   84 (99)
T ss_dssp             ETT
T ss_pred             eCC
Confidence            975