Psyllid ID: psy8808

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKNDALPCYQFGK
Secondary Structure (PSIPRED)
cccccccccccccccccHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHEEEccccHHHccHHHHHHccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHcHHHHHHcccccccccccHHHHHHHHcHHHEHHccccccccccccccccccccccccEEEEccc
Coil and Loop (DISEMBL)
mpdddpvyskFRQVCMNFVRsttdidqgcnpgytpaeQMIQVKHNRIATVLghlnphwddetLYQEARKILIAEYSHINYYEWLPIVVVTHWMDaslvygsdDELAAKLREfnggrlavefrdgrpwppaaanksavcdskndalpcyqfgk
Flexible Loop (DISEMBL)
MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAaanksavcdskndalpcyqfgk
Low Complexity Region (SEG)
MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKNDALPCYQFGK
Disordered region (IsUnstruct)
*******YSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGR*W*************************
Disordered Region (DISOPRED)
MP******SKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAAN*SA*CDSKNDALPCYQFG*
Disordered Region (DISEMBL)
MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKNDALPCYQFGK
Disordered Region (DISPRO)
****DPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKNDALPCYQFG*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKNDALPCYQFGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
Q01603	690	Peroxidase OS=Drosophila	yes	N/A	0.131	0.028	0.522	2e-14
P82600	790	Chorion peroxidase OS=Aed	N/A	N/A	0.532	0.102	0.428	7e-13
Q9VZZ4	1527	Peroxidasin OS=Drosophila	no	N/A	0.342	0.034	0.5	1e-10
Q9VEG6	809	Chorion peroxidase OS=Dro	no	N/A	0.355	0.066	0.509	2e-10
A1KZ92	1463	Peroxidasin-like protein	yes	N/A	0.243	0.025	0.608	2e-10
Q92626	1479	Peroxidasin homolog OS=Ho	no	N/A	0.335	0.034	0.508	9e-10
A4IGL7	1457	Peroxidasin OS=Xenopus tr	yes	N/A	0.328	0.034	0.5	1e-09
Q3UQ28	1475	Peroxidasin homolog OS=Mu	yes	N/A	0.335	0.034	0.491	2e-09
P05164	745	Myeloperoxidase OS=Homo s	no	N/A	0.335	0.068	0.482	6e-09
Q7QH73	767	Chorion peroxidase OS=Ano	no	N/A	0.039	0.007	0.490	2e-08

>sp|Q01603|PERO_DROME Peroxidase OS=Drosophila melanogaster GN=Pxd PE=2 SV=2

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 46/67 (68%)

Query: 22  TTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYY 81
           + D+    NPG    + ++  +HNRIA  L  LNPH+DD TL+QEARKI IA+Y  I+YY
Sbjct: 327 SGDVRVNQNPGLAILQTILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYY 386

Query: 82  EWLPIVV 88
           EWLPI +
Sbjct: 387 EWLPIFL 393

Involved in the chorion hardening process, through protein cross-linking mediated by the formation of di- and tri-tyrosine bonds.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7

>sp|P82600|PERC_AEDAE Chorion peroxidase OS=Aedes aegypti GN=pxt PE=1 SV=3

 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 3/84 (3%)

Query: 8   YSKFRQVCMNFVR---STTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLY 64
           +++ R  C+ + R      DI      G T    +   +HNR+A  L  +NPHWDDE LY
Sbjct: 426 FARNRTACVPWARVCYEGGDIRTNQLLGLTMVHTLFMREHNRLAVGLSKINPHWDDERLY 485

Query: 65  QEARKILIAEYSHINYYEWLPIVV 88
           QEAR+ILIAEY ++ Y E+LPI++
Sbjct: 486 QEARRILIAEYQNVVYNEFLPILL 509

Involved in the formation of a rigid and insoluble egg chorion by catalyzing chorion protein cross-linking through dityrosine formation and phenol oxidase-catalyzed chorion melanization.

Aedes aegypti (taxid: 7159)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q9VZZ4|PXDN_DROME Peroxidasin OS=Drosophila melanogaster GN=Pxn PE=1 SV=1

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 38/52 (73%)

Query: 43   KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMD 94
            +HNRIA+ L  +N HWD +TLYQEARKI+ A+  HI + +WLP+++    M+
Sbjct: 1029 EHNRIASKLKQINSHWDGDTLYQEARKIVGAQMQHITFKQWLPLIIGESGME 1080

Plays a role in extracellular matrix consolidation, phagocytosis and defense.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q9VEG6|PERC_DROME Chorion peroxidase OS=Drosophila melanogaster GN=Pxt PE=2 SV=3

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 38/55 (69%)

Query: 39  MIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWM 93
           ++  +HNR+A  L  LNP   DETL+QEAR+I+IAE  HI Y E+LPI++    M
Sbjct: 477 LLAREHNRVAGALHELNPSASDETLFQEARRIVIAEMQHITYNEFLPIIIGPQQM 531

Required for ovarian follicle maturation. Involved in the formation of a rigid and insoluble egg chorion by catalyzing chorion protein cross-linking through dityrosine formation and phenol oxidase-catalyzed chorion melanization.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|A1KZ92|PXDNL_HUMAN Peroxidasin-like protein OS=Homo sapiens GN=PXDNL PE=1 SV=3

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 34/46 (73%)

Query: 43   KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
            +HNR+AT L  LNPHW+  T+YQEARKI+ AE  HI Y  WLP V+
Sbjct: 977  EHNRMATELSALNPHWEGNTVYQEARKIVGAELQHITYSHWLPKVL 1022

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q92626|PXDN_HUMAN Peroxidasin homolog OS=Homo sapiens GN=PXDN PE=1 SV=2

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 36/57 (63%)

Query: 32   GYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
            G T    +   +HNRIAT L  LNPHWD +T+Y E RKI+ AE  HI Y  WLP ++
Sbjct: 983  GLTSMHTLWFREHNRIATELLKLNPHWDGDTIYYETRKIVGAEIQHITYQHWLPKIL 1039

Displays low peroxidase activity and is likely to participate in H(2)O(2) metabolism and peroxidative reactions in the cardiovascular system. Plays a role in extracellular matrix formation.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|A4IGL7|PXDN_XENTR Peroxidasin OS=Xenopus tropicalis GN=pxdn PE=2 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%)

Query: 32   GYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
            G T    +   +HNRIAT L  LNPHWD +T+Y E RKI+ A+  HI Y  WLP +
Sbjct: 972  GLTSMHTLWFREHNRIATELLRLNPHWDGDTIYHETRKIVGAQMQHITYSHWLPKI 1027

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q3UQ28|PXDN_MOUSE Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=2

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 35/57 (61%)

Query: 32   GYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
            G T    +   +HNRIA  L  LNPHWD +T+Y E RKI+ AE  HI Y  WLP ++
Sbjct: 980  GLTSMHTLWFREHNRIAAELLKLNPHWDGDTVYHETRKIVGAEIQHITYRHWLPKIL 1036

Displays low peroxidase activity and is likely to participate in H(2)O(2) metabolism and peroxidative reactions in the cardiovascular system (By similarity). Plays a role in extracellular matrix formation.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|P05164|PERM_HUMAN Myeloperoxidase OS=Homo sapiens GN=MPO PE=1 SV=1

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 37/58 (63%)

Query: 31  PGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           P  T    ++  +HNR+AT L  LNP WD E LYQEARKI+ A    I Y ++LP+V+
Sbjct: 410 PELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVL 467

Part of the host defense system of polymorphonuclear leukocytes. It is responsible for microbicidal activity against a wide range of organisms. In the stimulated PMN, MPO catalyzes the production of hypohalous acids, primarily hypochlorous acid in physiologic situations, and other toxic intermediates that greatly enhance PMN microbicidal activity.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: .

EC: 2

>sp|Q7QH73|PERC_ANOGA Chorion peroxidase OS=Anopheles gambiae GN=pxt PE=2 SV=3

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 34/55 (61%)

Query: 34  TPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           T    +   +HNR+AT L  LN HWDDE LYQE R+I+ A    I Y E+LP +V
Sbjct: 433 TEMHTLFLREHNRVATALAALNRHWDDERLYQETRRIVGAVMQKIFYNEYLPSIV 487

Involved in the formation of a rigid and insoluble egg chorion by catalyzing chorion protein cross-linking through dityrosine formation and phenol oxidase-catalyzed chorion melanization.

Anopheles gambiae (taxid: 7165)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
328707938	694	PREDICTED: peroxidase-like [Acyrthosipho	0.684	0.149	0.496	6e-32
307167191	1552	Peroxidase [Camponotus floridanus]	0.684	0.067	0.397	6e-22
340717182	702	PREDICTED: peroxidase-like isoform 1 [Bo	0.684	0.148	0.384	5e-20
156549449	696	PREDICTED: peroxidase-like [Nasonia vitr	0.684	0.149	0.384	1e-19
350407373	702	PREDICTED: peroxidase-like isoform 1 [Bo	0.684	0.148	0.377	4e-19
383856116	692	PREDICTED: peroxidase-like [Megachile ro	0.684	0.150	0.384	1e-18
307209899	745	Peroxidase [Harpegnathos saltator]	0.684	0.139	0.364	1e-18
328776817	703	PREDICTED: peroxidase [Apis mellifera]	0.684	0.147	0.364	1e-17
91078176	673	PREDICTED: similar to AGAP010734-PA [Tri	0.684	0.154	0.317	1e-15
380021230	709	PREDICTED: peroxidase-like [Apis florea]	0.684	0.146	0.364	5e-15

>gi|328707938|ref|XP_001949485.2| PREDICTED: peroxidase-like [Acyrthosiphon pisum]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/151 (49%), Positives = 85/151 (56%), Gaps = 47/151 (31%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
           +P+DDPV+SKF + CMNFVRSTTD + GCN G  PAEQ+                     
Sbjct: 224 IPEDDPVFSKFHRECMNFVRSTTDQETGCNAGNKPAEQL--------------------- 262

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE 120
                                     VVV+HWMDAS VYGS+  LA  LRE  GGRL VE
Sbjct: 263 --------------------------VVVSHWMDASFVYGSNQRLADTLREGIGGRLRVE 296

Query: 121 FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
           FRDGRPWPPAAANKSAVCD + +  PCYQFG
Sbjct: 297 FRDGRPWPPAAANKSAVCDQQTEEEPCYQFG 327

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167191|gb|EFN60907.1| Peroxidase [Camponotus floridanus]

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 77/151 (50%), Gaps = 47/151 (31%)

Query: 1    MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
            +PDDDPVYSK    CMNFVRSTTD+D+GC+  Y PAEQ+                     
Sbjct: 1121 IPDDDPVYSKTPMQCMNFVRSTTDLDRGCSSSYKPAEQL--------------------- 1159

Query: 61   ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE 120
                                        V+ ++D SLVYGS+DE+AA LR   GGRL VE
Sbjct: 1160 --------------------------NTVSQYLDLSLVYGSNDEVAASLRAGFGGRLNVE 1193

Query: 121  FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
             ++ R +PP+A+NKSA CD+  +   CY  G
Sbjct: 1194 LKNNREFPPSASNKSATCDTIYEFETCYVAG 1224

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717182|ref|XP_003397066.1| PREDICTED: peroxidase-like isoform 1 [Bombus terrestris] gi|340717184|ref|XP_003397067.1| PREDICTED: peroxidase-like isoform 2 [Bombus terrestris]

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 71/151 (47%), Gaps = 47/151 (31%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
           +P DDP YSK    C+NFVRSTTD+D+ C   Y PAEQ+                     
Sbjct: 239 IPYDDPTYSKANIRCLNFVRSTTDLDRSCASRYKPAEQL--------------------- 277

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE 120
                                      VVTH++D SLVYGS D+LA  LR   GGR+ VE
Sbjct: 278 --------------------------TVVTHFLDLSLVYGSSDQLATSLRAGVGGRMNVE 311

Query: 121 FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
            R  R WPP A NKS +C++ +    CYQ G
Sbjct: 312 IRRNREWPPMATNKSQLCETTDPNEICYQAG 342

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156549449|ref|XP_001603589.1| PREDICTED: peroxidase-like [Nasonia vitripennis]

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 71/151 (47%), Gaps = 47/151 (31%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
           +P +DPVYS   Q C NFVRSTTD+D+GC+ GYTPAEQ+                     
Sbjct: 231 IPPNDPVYSYEMQQCRNFVRSTTDLDRGCSSGYTPAEQL--------------------- 269

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE 120
                                      VV+H++D S++YGS D +AA LR   GGRL  +
Sbjct: 270 --------------------------TVVSHFLDLSIIYGSSDAVAASLRAGVGGRLLTD 303

Query: 121 FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
            R  R W P A NKS  CD   DA  CY  G
Sbjct: 304 VRGNREWLPQATNKSGTCDIYGDADVCYTSG 334

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350407373|ref|XP_003488069.1| PREDICTED: peroxidase-like isoform 1 [Bombus impatiens] gi|350407376|ref|XP_003488070.1| PREDICTED: peroxidase-like isoform 2 [Bombus impatiens]

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 70/151 (46%), Gaps = 47/151 (31%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
           +P DD  YSK    C+NFVRSTTD+D+ C   Y PAEQ+                     
Sbjct: 239 IPYDDSTYSKANIRCLNFVRSTTDLDRSCASRYKPAEQL--------------------- 277

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE 120
                                      VVTH++D SLVYGS D+LA  LR   GGR+ VE
Sbjct: 278 --------------------------TVVTHFLDLSLVYGSSDQLATSLRAGVGGRMNVE 311

Query: 121 FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
            R  R WPP A NKS +C++ +    CYQ G
Sbjct: 312 IRRNREWPPMATNKSQLCETTDPNEICYQAG 342

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856116|ref|XP_003703556.1| PREDICTED: peroxidase-like [Megachile rotundata]

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 71/151 (47%), Gaps = 47/151 (31%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
           +P +DPV+SK    C+NFVRSTTD+D+GC+    PAEQ+                     
Sbjct: 228 IPYEDPVFSKANIRCLNFVRSTTDLDRGCSSQSKPAEQL--------------------- 266

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE 120
                                       VTH +D SLVYGS D+ AA LR   GGRL V+
Sbjct: 267 --------------------------NTVTHLLDLSLVYGSSDQTAAGLRAGVGGRLNVD 300

Query: 121 FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
            R  R WPPAA NKS  C++  D   CYQ G
Sbjct: 301 VRHDREWPPAAMNKSQSCENMGDEGVCYQAG 331

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307209899|gb|EFN86678.1| Peroxidase [Harpegnathos saltator]

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 73/151 (48%), Gaps = 47/151 (31%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
           + + DPVYS     C+NFVRSTTD+D+GC+    PA+Q+                     
Sbjct: 275 IAEGDPVYSSSSVRCLNFVRSTTDLDRGCSSPRMPAQQL--------------------- 313

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE 120
                                       VTH++D SLVYGS D++AA LR   GGRL  E
Sbjct: 314 --------------------------NTVTHYLDLSLVYGSSDQVAASLRAGFGGRLNAE 347

Query: 121 FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
            R+ R +PP AANKSA+C++  +  PCY  G
Sbjct: 348 LRNNREFPPTAANKSAICETMYEHEPCYATG 378

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776817|ref|XP_623940.3| PREDICTED: peroxidase [Apis mellifera]

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 70/151 (46%), Gaps = 47/151 (31%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
           +P +DPVY K    C+NFVRSTTD+D GC+  + PAEQM                     
Sbjct: 238 IPFNDPVYGKTNTRCLNFVRSTTDLDHGCSDRFKPAEQM--------------------- 276

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE 120
                                      VVTH++D S+VYGS+D++AA LR    GRL V+
Sbjct: 277 --------------------------NVVTHFLDLSIVYGSNDQVAANLRAGVNGRLRVD 310

Query: 121 FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
            R  R WPP+A N S  CD  +    CY  G
Sbjct: 311 VRTNREWPPSALNASESCDIVSPVEVCYLAG 341

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91078176|ref|XP_967241.1| PREDICTED: similar to AGAP010734-PA [Tribolium castaneum] gi|270002725|gb|EEZ99172.1| hypothetical protein TcasGA2_TC000175 [Tribolium castaneum]

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 68/151 (45%), Gaps = 47/151 (31%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
           +P+DDP +S+    CMNFVR+ TD D+ C  G  PAEQ+                     
Sbjct: 203 LPNDDPAHSQTNAKCMNFVRTITDRDRNCVGGSQPAEQL--------------------- 241

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE 120
                                       V H++D S+VYG+ D++  ++R+F GGRL VE
Sbjct: 242 --------------------------TAVNHYLDLSIVYGNSDQINQQVRQFQGGRLRVE 275

Query: 121 FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
            RDG+ W P + N S VC  ++    CY  G
Sbjct: 276 VRDGKEWLPRSTNASGVCSIQSPQEVCYLAG 306

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021230|ref|XP_003694474.1| PREDICTED: peroxidase-like [Apis florea]

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 65/151 (43%), Gaps = 47/151 (31%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
           +P +DPVY K    C+NFVRSTTD+D GC     PAEQM                     
Sbjct: 243 IPFNDPVYGKTNIRCLNFVRSTTDLDYGCLDRLKPAEQM--------------------- 281

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE 120
                                      VVTH++D SLVYGS D++AA LR    GRL V+
Sbjct: 282 --------------------------NVVTHFLDLSLVYGSSDQVAANLRAGVNGRLRVD 315

Query: 121 FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
            R  R W P+A N S  CD       CY  G
Sbjct: 316 VRTNREWLPSAPNASESCDIVKPVEVCYLAG 346

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
FB|FBgn0038511	753	CG5873 [Drosophila melanogaste	0.394	0.079	0.491	7.8e-14
FB|FBgn0004577	690	Pxd "Peroxidase" [Drosophila m	0.414	0.091	0.555	1.5e-13
FB|FBgn0263986	830	cd "cardinal" [Drosophila mela	0.296	0.054	0.577	9e-13
FB|FBgn0261987	809	Pxt "Peroxinectin-like" [Droso	0.302	0.056	0.586	1.3e-12
UNIPROTKB|P82600	790	pxt "Chorion peroxidase" [Aede	0.532	0.102	0.428	5.7e-12
UNIPROTKB|F1M335	1317	F1M335 "Uncharacterized protei	0.519	0.059	0.445	9.5e-12
MGI|MGI:1916925	1475	Pxdn "peroxidasin homolog (Dro	0.519	0.053	0.445	1.1e-11
WB|WBGene00016700	1537	C46A5.4 [Caenorhabditis elegan	0.532	0.052	0.393	3.8e-09
FB|FBgn0032685	1394	CG10211 [Drosophila melanogast	0.440	0.048	0.4	3.4e-08
WB|WBGene00011530	1490	T06D8.10 [Caenorhabditis elega	0.381	0.038	0.448	2.2e-09

FB|FBgn0038511 CG5873 [Drosophila melanogaster (taxid:7227)]

 Score = 152 (58.6 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
 Identities = 30/61 (49%), Positives = 41/61 (67%)

Query:    43 KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDA-SLVYGS 101
             +HNR+AT L  +N HWDDETL+QEAR+I IA   H+ + E+LPI++    M+   LV   
Sbjct:   398 EHNRLATALAQINKHWDDETLFQEARRINIAIVQHVTFNEFLPILLGKEVMEKFGLVLQK 457

Query:   102 D 102
             D
Sbjct:   458 D 458

GO:0004601 "peroxidase activity" evidence=ISS

GO:0020037 "heme binding" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

FB|FBgn0004577 Pxd "Peroxidase" [Drosophila melanogaster (taxid:7227)]

 Score = 187 (70.9 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    24 DIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEW 83
             D+    NPG    + ++  +HNRIA  L  LNPH+DD TL+QEARKI IA+Y  I+YYEW
Sbjct:   329 DVRVNQNPGLAILQTILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYYEW 388

Query:    84 LPI 86
             LPI
Sbjct:   389 LPI 391

GO:0004601 "peroxidase activity" evidence=ISS;NAS

GO:0005506 "iron ion binding" evidence=NAS

GO:0005576 "extracellular region" evidence=NAS

GO:0020037 "heme binding" evidence=IEA;NAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0007306 "eggshell chorion assembly" evidence=NAS

GO:0042600 "chorion" evidence=IDA

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

FB|FBgn0263986 cd "cardinal" [Drosophila melanogaster (taxid:7227)]

 Score = 143 (55.4 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
 Identities = 26/45 (57%), Positives = 34/45 (75%)

Query:    44 HNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
             HN +A  L   NPHW+DE LYQEARKIL A+ +HI Y E+LP+++
Sbjct:   457 HNYLARQLQEQNPHWEDERLYQEARKILGAQMAHITYNEFLPVLL 501

GO:0006727 "ommochrome biosynthetic process" evidence=IMP

GO:0004601 "peroxidase activity" evidence=ISS

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0060967 "negative regulation of gene silencing by RNA" evidence=IMP

GO:0005764 "lysosome" evidence=IDA

FB|FBgn0261987 Pxt "Peroxinectin-like" [Drosophila melanogaster (taxid:7227)]

 Score = 145 (56.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
 Identities = 27/46 (58%), Positives = 35/46 (76%)

Query:    43 KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
             +HNR+A  L  LNP   DETL+QEAR+I+IAE  HI Y E+LPI++
Sbjct:   481 EHNRVAGALHELNPSASDETLFQEARRIVIAEMQHITYNEFLPIII 526

GO:0004601 "peroxidase activity" evidence=ISS;NAS

GO:0020037 "heme binding" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004666 "prostaglandin-endoperoxide synthase activity" evidence=ISM

GO:0001516 "prostaglandin biosynthetic process" evidence=IMP

GO:0030707 "ovarian follicle cell development" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0007304 "chorion-containing eggshell formation" evidence=IMP

UNIPROTKB|P82600 pxt "Chorion peroxidase" [Aedes aegypti (taxid:7159)]

 Score = 173 (66.0 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 36/84 (42%), Positives = 51/84 (60%)

Query:     8 YSKFRQVCMNFVR---STTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLY 64
             +++ R  C+ + R      DI      G T    +   +HNR+A  L  +NPHWDDE LY
Sbjct:   426 FARNRTACVPWARVCYEGGDIRTNQLLGLTMVHTLFMREHNRLAVGLSKINPHWDDERLY 485

Query:    65 QEARKILIAEYSHINYYEWLPIVV 88
             QEAR+ILIAEY ++ Y E+LPI++
Sbjct:   486 QEARRILIAEYQNVVYNEFLPILL 509

GO:0004601 "peroxidase activity" evidence=IDA

GO:0005576 "extracellular region" evidence=IC

GO:0007306 "eggshell chorion assembly" evidence=IDA

GO:0042743 "hydrogen peroxide metabolic process" evidence=IDA

UNIPROTKB|F1M335 F1M335 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 146 (56.5 bits), Expect = 9.5e-12, Sum P(3) = 9.5e-12
 Identities = 37/83 (44%), Positives = 45/83 (54%)

Query:    43 KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVY-GS 101
             +HNRIA  L  LNPHWD +T+Y E RKI+ AE  HI Y  WLP ++    M     Y G 
Sbjct:   833 EHNRIAAELLKLNPHWDGDTVYHETRKIVGAEIQHITYRHWLPKILGEVGMKMLGEYRGY 892

Query:   102 DDELAAKLREFNGGRLAVEFRDG 124
             D  + A +  FN    A  FR G
Sbjct:   893 DPSVNAGI--FNAFATAA-FRFG 912

GO:0004601 "peroxidase activity" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

MGI|MGI:1916925 Pxdn "peroxidasin homolog (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 146 (56.5 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
 Identities = 37/83 (44%), Positives = 45/83 (54%)

Query:    43 KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVY-GS 101
             +HNRIA  L  LNPHWD +T+Y E RKI+ AE  HI Y  WLP ++    M     Y G 
Sbjct:   991 EHNRIAAELLKLNPHWDGDTVYHETRKIVGAEIQHITYRHWLPKILGEVGMKMLGEYRGY 1050

Query:   102 DDELAAKLREFNGGRLAVEFRDG 124
             D  + A +  FN    A  FR G
Sbjct:  1051 DPSVNAGI--FNAFATAA-FRFG 1070

GO:0004601 "peroxidase activity" evidence=ISO

GO:0005201 "extracellular matrix structural constituent" evidence=ISO

GO:0005576 "extracellular region" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005615 "extracellular space" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0020037 "heme binding" evidence=ISO

GO:0030198 "extracellular matrix organization" evidence=ISO;IDA

GO:0031012 "extracellular matrix" evidence=ISO;IDA

GO:0042744 "hydrogen peroxide catabolic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA;ISO

WB|WBGene00016700 C46A5.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 150 (57.9 bits), Expect = 3.8e-09, P = 3.8e-09
 Identities = 35/89 (39%), Positives = 49/89 (55%)

Query:    31 PGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV-- 88
             PG T    +   +HNRIA  L  +N  W DE L+QE+R+I IA+  HI Y EWLP+V+  
Sbjct:  1123 PGLTAIHNIFLREHNRIARYLKQINNFWSDEKLFQESRRINIAQLQHIIYKEWLPVVLGC 1182

Query:    89 --VTHW--MDASLVY--GSDDELAAKLRE 111
               +  W  M  +  Y  G DD+  A + +
Sbjct:  1183 QNMEKWGLMPQTAGYFEGYDDQCDATISQ 1211

GO:0004601 "peroxidase activity" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

FB|FBgn0032685 CG10211 [Drosophila melanogaster (taxid:7227)]

 Score = 126 (49.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
 Identities = 28/70 (40%), Positives = 39/70 (55%)

Query:    31 PGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVT 90
             PG T        +HNRI   L  +NPHW+ E L+  ARKI+ A+  HI + E+LP ++  
Sbjct:   942 PGLTAIHTAFLREHNRIVEGLRGVNPHWNGEQLFHHARKIVSAQVQHIVFNEFLPRIL-- 999

Query:    91 HWMDASLVYG 100
              W   +L YG
Sbjct:  1000 SWNAVNL-YG 1008

GO:0004601 "peroxidase activity" evidence=ISS

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

WB|WBGene00011530 T06D8.10 [Caenorhabditis elegans (taxid:6239)]

 Score = 143 (55.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
 Identities = 26/58 (44%), Positives = 38/58 (65%)

Query:    31 PGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
             PG T        +HNRIA  L  LNP W+D+T+++EAR+I+ AE  HI + E+LP ++
Sbjct:  1076 PGLTIMHTFFVREHNRIAMQLSALNPQWNDDTVFEEARRIVTAEMQHITFAEFLPKII 1133

GO:0004601 "peroxidase activity" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	152
cd09823	378	cd09823, peroxinectin_like, peroxinectin_like anim	2e-25
pfam03098	521	pfam03098, An_peroxidase, Animal haem peroxidase	9e-22
cd09826	440	cd09826, peroxidasin_like, Animal heme peroxidase	2e-17
cd09823	378	cd09823, peroxinectin_like, peroxinectin_like anim	3e-17
pfam03098	521	pfam03098, An_peroxidase, Animal haem peroxidase	6e-16
cd05396	370	cd05396, An_peroxidase_like, Animal heme peroxidas	1e-15
cd09824	411	cd09824, myeloperoxidase_like, Myeloperoxidases, e	9e-14
cd09825	565	cd09825, thyroid_peroxidase, Thyroid peroxidase (T	3e-13
cd09822	420	cd09822, peroxinectin_like_bacterial, Uncharacteri	4e-11
cd09820	558	cd09820, dual_peroxidase_like, Dual oxidase and re	2e-10
cd09816	490	cd09816, prostaglandin_endoperoxide_synthase, Anim	4e-09
cd05396	370	cd05396, An_peroxidase_like, Animal heme peroxidas	2e-08
cd09824	411	cd09824, myeloperoxidase_like, Myeloperoxidases, e	1e-07
cd09826	440	cd09826, peroxidasin_like, Animal heme peroxidase	1e-06
cd09822	420	cd09822, peroxinectin_like_bacterial, Uncharacteri	2e-06
cd09818	484	cd09818, PIOX_like, Animal heme oxidases similar t	3e-05
cd09825	565	cd09825, thyroid_peroxidase, Thyroid peroxidase (T	2e-04
cd09820	558	cd09820, dual_peroxidase_like, Dual oxidase and re	7e-04
cd09818	484	cd09818, PIOX_like, Animal heme oxidases similar t	0.001
PLN02283	633	PLN02283, PLN02283, alpha-dioxygenase	0.003

>gnl|CDD|188655 cd09823, peroxinectin_like, peroxinectin_like animal heme peroxidases

 Score = 99.2 bits (248), Expect = 2e-25
 Identities = 30/45 (66%), Positives = 36/45 (80%)

Query: 44  HNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           HNRIA  L  LNPHWDDE L+QEARKI+IA+  HI Y E+LPI++
Sbjct: 90  HNRIADELKKLNPHWDDERLFQEARKIVIAQMQHITYNEFLPILL 134

Peroxinectin is an arthropod protein that plays a role in invertebrate immunity mechanisms. Specifically, peroxinectins are secreted as cell-adhesive and opsonic peroxidases. The immunity mechanism appears to involve an interaction between peroxinectin and a transmembrane receptor of the integrin family. Human myeloperoxidase, which is included in this wider family, has also been reported to interact with integrins. Length = 378

>gnl|CDD|217366 pfam03098, An_peroxidase, Animal haem peroxidase

 Score = 90.1 bits (224), Expect = 9e-22
 Identities = 27/45 (60%), Positives = 33/45 (73%)

Query: 44  HNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           HNRIA  L  LNPHW DE L+QEAR I+IA+Y  I Y E+LP ++
Sbjct: 227 HNRIADELKALNPHWSDEKLFQEARLIVIAQYQKITYNEYLPALL 271

Length = 521

>gnl|CDD|188658 cd09826, peroxidasin_like, Animal heme peroxidase domain of peroxidasin and related proteins

 Score = 77.3 bits (191), Expect = 2e-17
 Identities = 26/45 (57%), Positives = 32/45 (71%)

Query: 44  HNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           HNRIA+ L  LNPHWD ET+Y E RKI+ A+  HI Y  WLP ++
Sbjct: 132 HNRIASELLELNPHWDGETIYHETRKIVGAQMQHITYSHWLPKIL 176

Peroxidasin is a secreted heme peroxidase which is involved in hydrogen peroxide metabolism and peroxidative reactions in the cardiovascular system. The domain co-occurs with extracellular matrix domains and may play a role in the formation of the extracellular matrix. Length = 440

>gnl|CDD|188655 cd09823, peroxinectin_like, peroxinectin_like animal heme peroxidases

 Score = 76.5 bits (189), Expect = 3e-17
 Identities = 26/63 (41%), Positives = 35/63 (55%)

Query: 89  VTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKNDALPCY 148
           VT ++D S VYGS +E A KLR F GG L  + R+GR   P + N +  C   +   PC+
Sbjct: 7   VTSFLDGSQVYGSSEEEARKLRTFKGGLLKTQRRNGRELLPFSNNPTDDCSLSSAGKPCF 66

Query: 149 QFG 151
             G
Sbjct: 67  LAG 69

Peroxinectin is an arthropod protein that plays a role in invertebrate immunity mechanisms. Specifically, peroxinectins are secreted as cell-adhesive and opsonic peroxidases. The immunity mechanism appears to involve an interaction between peroxinectin and a transmembrane receptor of the integrin family. Human myeloperoxidase, which is included in this wider family, has also been reported to interact with integrins. Length = 378

>gnl|CDD|217366 pfam03098, An_peroxidase, Animal haem peroxidase

 Score = 73.1 bits (180), Expect = 6e-16
 Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 59/154 (38%)

Query: 2   PDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDE 61
           P  DP +S F + C+ F RS      G +    P EQ+ Q+                   
Sbjct: 108 PPGDPYFSPFGR-CLPFFRSAPACGTGPSCN-LPREQINQL------------------- 146

Query: 62  TLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVE- 120
                                       T ++D S VYGS +E A KLR F  G+L V  
Sbjct: 147 ----------------------------TSYLDLSQVYGSSEEEADKLRTFKDGKLKVNG 178

Query: 121 ---FRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
                +G+   PA     + C      L C+  G
Sbjct: 179 EFPPPNGKGLLPAPPPGPSGC------LSCFLAG 206

Length = 521

>gnl|CDD|188647 cd05396, An_peroxidase_like, Animal heme peroxidases and related proteins

 Score = 72.1 bits (177), Expect = 1e-15
 Identities = 25/44 (56%), Positives = 31/44 (70%)

Query: 44  HNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           HNR+A  L   +P WDDE LYQEAR I+IA+Y  I Y E+LP +
Sbjct: 92  HNRLADRLKKEHPEWDDERLYQEARLIVIAQYQLITYNEYLPAI 135

A diverse family of enzymes, which includes prostaglandin G/H synthase, thyroid peroxidase, myeloperoxidase, linoleate diol synthase, lactoperoxidase, peroxinectin, peroxidasin, and others. Despite its name, this family is not restricted to metazoans: members are found in fungi, plants, and bacteria as well. Length = 370

>gnl|CDD|188656 cd09824, myeloperoxidase_like, Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases

 Score = 66.7 bits (163), Expect = 9e-14
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 30  NPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           NPG      ++  +HNR+A  L  LNPHWD ETLYQEARKI+ A    I Y ++LP+++
Sbjct: 94  NPGLAALHTLLLREHNRLARELHRLNPHWDGETLYQEARKIVGAMVQIITYRDYLPLIL 152

This well conserved family of animal heme peroxidases contains members with somewhat diverse functions. Myeloperoxidases are lysosomal proteins found in azurophilic granules of neutrophils and the lysosomes of monocytes. They are involved in the formation of microbicidal agents upon activation of activated neutrophils (neutrophils undergoing respiratory bursts as a result of phagocytosis), by catalyzing the conversion of hydrogen peroxide to hypochlorous acid. As a heme protein, myeloperoxidase is responsible for the greenish tint of pus, which is rich in neutrophils. Eosinophil peroxidases are haloperoxidases as well, preferring bromide over chloride. Expressed by eosinophil granulocytes, they are involved in attacking multicellular parasites and play roles in various inflammatory diseases such as asthma. The haloperoxidase lactoperoxidase is secreted from mucosal glands and provides antibacterial activity by oxidizing a variety of substrates such as bromide or chloride in the presence of hydrogen peroxide. Length = 411

>gnl|CDD|188657 cd09825, thyroid_peroxidase, Thyroid peroxidase (TPO)

 Score = 65.5 bits (160), Expect = 3e-13
 Identities = 21/42 (50%), Positives = 30/42 (71%)

Query: 44  HNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLP 85
           HNR+A  L  +NPHWD E +YQEARKI+ A +  I + +++P
Sbjct: 245 HNRLARALKSINPHWDGEQIYQEARKIVGALHQIITFRDYIP 286

TPO is a member of the animal heme peroxidase family, which is expressed in the thyroid and involved in the processing of iodine and iodine compounds. Specifically, TPO oxidizes iodide via hydrogen peroxide to form active iodine, which is then, for example, incorporated into the tyrosine residues of thyroglobulin to yield mono- and di-iodotyrosines. Length = 565

>gnl|CDD|188654 cd09822, peroxinectin_like_bacterial, Uncharacterized family of heme peroxidases, mostly bacterial

 Score = 59.2 bits (144), Expect = 4e-11
 Identities = 24/59 (40%), Positives = 32/59 (54%)

Query: 44  HNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSD 102
           HNR+A  L   NP   DE +YQ AR I+IAE   I Y E+LP ++  + + A   Y   
Sbjct: 137 HNRLADELARRNPSLSDEEIYQAARAIVIAEIQAITYNEFLPALLGENALPAYSGYDET 195

Animal heme peroxidases are diverse family of enzymes which are not restricted to animals. Members are also found in metazoans, fungi, and plants, and also in bacteria - like most members of this family of uncharacterized proteins. Length = 420

>gnl|CDD|188652 cd09820, dual_peroxidase_like, Dual oxidase and related animal heme peroxidases

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 21/43 (48%), Positives = 29/43 (67%)

Query: 44  HNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPI 86
           HN +A  +   +P W DE ++QEARK +IA Y +I +YEWLP 
Sbjct: 225 HNYLAQRIAREHPDWSDEDIFQEARKWVIATYQNIVFYEWLPA 267

Animal heme peroxidases of the dual-oxidase like subfamily play vital roles in the innate mucosal immunity of gut epithelia. They provide reactive oxygen species which help control infection. Length = 558

>gnl|CDD|188648 cd09816, prostaglandin_endoperoxide_synthase, Animal prostaglandin endoperoxide synthase and related bacterial proteins

 Score = 53.4 bits (129), Expect = 4e-09
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 44  HNRIATVLGHLNPHWDDETLYQEARKILIAE 74
           HNR+  +L   +P WDDE L+Q AR ILI E
Sbjct: 223 HNRVCDILKKEHPDWDDERLFQTARNILIGE 253

Animal prostaglandin endoperoxide synthases, including prostaglandin H2 synthase and a set of similar bacterial proteins which may function as cyclooxygenases. Prostaglandin H2 synthase catalyzes the synthesis of prostaglandin H2 from arachidonic acid. In two reaction steps, arachidonic acid is converted to Prostaglandin G2, a peroxide (cyclooxygenase activity) and subsequently converted to the end product via the enzyme's peroxidase activity. Prostaglandin H2 synthase is the target of aspirin and other non-steroid anti-inflammatory drugs such as ibuprofen, which block the substrate's access to the active site and may acetylate a conserved serine residue. In humans and other mammals, prostaglandin H2 synthase (PGHS), also called cyclooxygenase (COX) is present as at least two isozymes, PGHS-1 (or COX-1) and PGHS-2 (or COX-2), respectively. PGHS-1 is expressed constitutively in most mammalian cells, while the expression of PGHS-2 is induced via inflammation response in endothelial cells, activated macrophages, and others. COX-3 is a splice variant of COX-1. Length = 490

>gnl|CDD|188647 cd05396, An_peroxidase_like, Animal heme peroxidases and related proteins

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 89  VTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPW----PPAAANKSAVCDSKNDA 144
            T ++D S +YGS+ ++A  LR F GG L      G  +     P      ++       
Sbjct: 5   RTPYLDGSSIYGSNPDVARALRTFKGGLLKTNEVKGPSYGTELLPFNNPNPSMGTIGLPP 64

Query: 145 LPCYQFG 151
             C+  G
Sbjct: 65  TRCFIAG 71

A diverse family of enzymes, which includes prostaglandin G/H synthase, thyroid peroxidase, myeloperoxidase, linoleate diol synthase, lactoperoxidase, peroxinectin, peroxidasin, and others. Despite its name, this family is not restricted to metazoans: members are found in fungi, plants, and bacteria as well. Length = 370

>gnl|CDD|188656 cd09824, myeloperoxidase_like, Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)

Query: 86  IVVVTHWMDASLVYGSDDELAAKLREFN--GGRLAV--EFRD-GRPWPPAAANKSAVCDS 140
           I  +T ++DAS+VYGS+  LA  LR      G LAV   F D G    P     +  C  
Sbjct: 15  INALTSFVDASMVYGSEPSLAKXLRNLTNQLGLLAVNQRFTDNGLALLPFENLHNDPCAL 74

Query: 141 KNDA--LPCYQFG 151
           +N +  +PC+  G
Sbjct: 75  RNTSANIPCFLAG 87

This well conserved family of animal heme peroxidases contains members with somewhat diverse functions. Myeloperoxidases are lysosomal proteins found in azurophilic granules of neutrophils and the lysosomes of monocytes. They are involved in the formation of microbicidal agents upon activation of activated neutrophils (neutrophils undergoing respiratory bursts as a result of phagocytosis), by catalyzing the conversion of hydrogen peroxide to hypochlorous acid. As a heme protein, myeloperoxidase is responsible for the greenish tint of pus, which is rich in neutrophils. Eosinophil peroxidases are haloperoxidases as well, preferring bromide over chloride. Expressed by eosinophil granulocytes, they are involved in attacking multicellular parasites and play roles in various inflammatory diseases such as asthma. The haloperoxidase lactoperoxidase is secreted from mucosal glands and provides antibacterial activity by oxidizing a variety of substrates such as bromide or chloride in the presence of hydrogen peroxide. Length = 411

>gnl|CDD|188658 cd09826, peroxidasin_like, Animal heme peroxidase domain of peroxidasin and related proteins

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 39/164 (23%), Positives = 53/164 (32%), Gaps = 67/164 (40%)

Query: 2   PDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYT--------PAEQMIQVKHNRIATVLGH 53
           P DDP     R  C+ FVRS+      C  G T        P EQ+ Q+           
Sbjct: 1   PPDDPRRRGHR--CIEFVRSSA----VCGSGSTSLLFNSVTPREQINQL----------- 43

Query: 54  LNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFN 113
                                               T ++DAS VYGS DE A +LR+  
Sbjct: 44  ------------------------------------TSYIDASNVYGSSDEEALELRDLA 67

Query: 114 GG----RLAVEFRDGRPWPPAAANKSAVC--DSKNDALPCYQFG 151
                 R+ +    G+P  P   +    C  D     +PC+  G
Sbjct: 68  SDRGLLRVGIVSEAGKPLLPFERDSPMDCRRDPNESPIPCFLAG 111

Peroxidasin is a secreted heme peroxidase which is involved in hydrogen peroxide metabolism and peroxidative reactions in the cardiovascular system. The domain co-occurs with extracellular matrix domains and may play a role in the formation of the extracellular matrix. Length = 440

>gnl|CDD|188654 cd09822, peroxinectin_like_bacterial, Uncharacterized family of heme peroxidases, mostly bacterial

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 18/45 (40%), Positives = 24/45 (53%)

Query: 85  PIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPP 129
            I  +T ++D S VYGSD+E A  LR F GG+L     +     P
Sbjct: 50  QINAITAYIDGSNVYGSDEERADALRSFGGGKLKTSVANAGDLLP 94

Animal heme peroxidases are diverse family of enzymes which are not restricted to animals. Members are also found in metazoans, fungi, and plants, and also in bacteria - like most members of this family of uncharacterized proteins. Length = 420

>gnl|CDD|188650 cd09818, PIOX_like, Animal heme oxidases similar to plant pathogen-inducible oxygenases

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 88  VVTHWMDASLVYGSDDELAAKLREFN-GGRLAVE 120
             THW D S +YGS +E   +LR F   G+L ++
Sbjct: 89  TNTHWWDGSQIYGSTEEAQKRLRTFPPDGKLKLD 122

This is a diverse family of oxygenases related to the animal heme peroxidases, with members from plants, animals, and bacteria. The plant pathogen-inducible oxygenases (PIOX) oxygenate fatty acids into 2R-hydroperoxides. They may be involved in the hypersensitive reaction, rapid and localized cell death induced by infection with pathogens, and the rapidly induced expression of PIOX may be caused by the oxidative burst that occurs in the process of cell death. Length = 484

>gnl|CDD|188657 cd09825, thyroid_peroxidase, Thyroid peroxidase (TPO)

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 40/156 (25%), Positives = 59/156 (37%), Gaps = 50/156 (32%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
           +P +DP      + C+ F RS+      C  G T              T+ G+L      
Sbjct: 108 LPSEDPRILG--RACLPFFRSSA----VCGTGDTS-------------TLFGNL------ 142

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNG--GRLA 118
                          S  N  E   I  +T ++DAS VYGS   LA  LR+ +   G L 
Sbjct: 143 ---------------SLANPRE--QINGLTSFIDASTVYGSTLALARSLRDLSSDDGLLR 185

Query: 119 VE--FRD-GRPWPPAAANKSAVCDSKN---DALPCY 148
           V   F D GR + P    + + C+      + +PC+
Sbjct: 186 VNSKFDDSGRDYLPFQPEEVSSCNPDPNGGERVPCF 221

TPO is a member of the animal heme peroxidase family, which is expressed in the thyroid and involved in the processing of iodine and iodine compounds. Specifically, TPO oxidizes iodide via hydrogen peroxide to form active iodine, which is then, for example, incorporated into the tyrosine residues of thyroglobulin to yield mono- and di-iodotyrosines. Length = 565

>gnl|CDD|188652 cd09820, dual_peroxidase_like, Dual oxidase and related animal heme peroxidases

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 89  VTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRP 126
           VT W+D S +YGS    +  LR F+GGRLA     G P
Sbjct: 137 VTSWIDGSSIYGSSKAWSDALRSFSGGRLASGDDGGFP 174

Animal heme peroxidases of the dual-oxidase like subfamily play vital roles in the innate mucosal immunity of gut epithelia. They provide reactive oxygen species which help control infection. Length = 558

>gnl|CDD|188650 cd09818, PIOX_like, Animal heme oxidases similar to plant pathogen-inducible oxygenases

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 44  HNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLP 85
           HN I   L    P W DE L+ +AR +  A  + I+  EW P
Sbjct: 159 HNAICDALRKEYPDWSDEQLFDKARLVNAALMAKIHTVEWTP 200

This is a diverse family of oxygenases related to the animal heme peroxidases, with members from plants, animals, and bacteria. The plant pathogen-inducible oxygenases (PIOX) oxygenate fatty acids into 2R-hydroperoxides. They may be involved in the hypersensitive reaction, rapid and localized cell death induced by infection with pathogens, and the rapidly induced expression of PIOX may be caused by the oxidative burst that occurs in the process of cell death. Length = 484

>gnl|CDD|177921 PLN02283, PLN02283, alpha-dioxygenase

 Score = 36.7 bits (85), Expect = 0.003
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query: 90  THWMDASLVYGSDDELAAKLREFNGGRLAV 119
           T W D S++YGS+++   ++R F  G+L +
Sbjct: 211 TPWWDGSVIYGSNEKGLRRVRTFKDGKLKI 240

Length = 633

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
KOG2408|consensus	719		99.94
PF03098	530	An_peroxidase: Animal haem peroxidase; InterPro: I	99.93
PLN02283	633	alpha-dioxygenase	99.86
KOG2408|consensus	719		99.08
PF03098	530	An_peroxidase: Animal haem peroxidase; InterPro: I	98.1
PLN02283	633	alpha-dioxygenase	97.64

>KOG2408|consensus

Probab=99.94  E-value=6.1e-28  Score=217.63  Aligned_cols=116  Identities=40%  Similarity=0.613  Sum_probs=95.1

Q ss_pred             CCCCCcccCCCCCeeeecccCccccCCCCCCCCCchhhchh---------------------------------------
Q psy8808           1 MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQ---------------------------------------   41 (152)
Q Consensus         1 vp~~D~~~~~~~~~c~~~~Rs~~~~~~~c~~~~~~r~q~n~---------------------------------------   41 (152)
                      ||++||+|...+ .||+|+||.+++..++..+  +|||+|+                                       
T Consensus       267 ~p~~dp~~~~~~-~C~~f~Rs~~~~~~~~~~~--~reQlNq~T~~lD~S~IYGss~~~~~~lR~f~~~~g~l~~~~~~~~  343 (719)
T KOG2408|consen  267 IPPNDPYFPSNQ-RCLPFVRSLPACGSGYNLG--PREQLNQLTSFLDASVIYGSSDEDARKLRLFKDGKGLLRVDTGLFE  343 (719)
T ss_pred             cCCCCCccCCcc-cceeceecCCCccccccCC--hhhhhccccccccchhccCCCHHHHHHHhcccCcccceeecccccc
Confidence            689999998755 9999999999965444555  9999998                                       


Q ss_pred             -------------------------------------------------hHHHHHHHHhhhcCCCCCchHHHHHHHHHHH
Q psy8808          42 -------------------------------------------------VKHNRIATVLGHLNPHWDDETLYQEARKILI   72 (152)
Q Consensus        42 -------------------------------------------------r~HN~~a~~l~~~~p~w~de~lf~~aR~i~~   72 (152)
                                                                       |||||||.+|+..||||+||+||||||||++
T Consensus       344 ~~~~~lP~~~~~~~~c~~~~~~~~~~cf~aGD~R~~~~pgL~~~hti~lREHNRiA~~Lk~~np~W~dE~lfQeaRkI~~  423 (719)
T KOG2408|consen  344 NGRPLLPFSTDPPNSCRSKPPGAPKPCFTAGDERANEQPGLAALHTLFLREHNRIATELKALNPHWSDERLFQEARKIVG  423 (719)
T ss_pred             cCcccCCCCCCCCccccccCCCCCCcccccCccccccCcchHHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHH
Confidence                                                             9999999999999999999999999999999


Q ss_pred             Hhhcccccccchhhhhhhccc-ccccc--------CCCCHHHHHhhcccCCCeEEE
Q psy8808          73 AEYSHINYYEWLPIVVVTHWM-DASLV--------YGSDDELAAKLREFNGGRLAV  119 (152)
Q Consensus        73 a~~q~I~~~e~lP~lLgt~~i-D~sl~--------ygss~~~a~~lR~f~~G~L~~  119 (152)
                      |++|||||+||||.+||..+- ..|..        .+.+.+++.++.+|.++++.-
T Consensus       424 A~~q~Ity~e~LP~ilG~~~~~~~g~~~gY~~~~dp~IsneFataAfRfgHsli~~  479 (719)
T KOG2408|consen  424 AQVQHITYNEYLPKLLGAPLKVSLGGYRGYDPNVDPTISNEFATAAFRFGHSLIPP  479 (719)
T ss_pred             HHHhhhhHHhhhhhhcCcccccCCccccCcCCCCChhhhhhhhHHHHhhhcccCch
Confidence            999999999999999994433 22333        233345566666677776664

>PF03098 An_peroxidase: Animal haem peroxidase; InterPro: IPR002007 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions

Probab=99.93  E-value=3.2e-27  Score=207.48  Aligned_cols=117  Identities=43%  Similarity=0.678  Sum_probs=86.7

Q ss_pred             CCCCCcccCCCCCeeeecccCccccCCCCCCCCCchhhchh---------------------------------------
Q psy8808           1 MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQ---------------------------------------   41 (152)
Q Consensus         1 vp~~D~~~~~~~~~c~~~~Rs~~~~~~~c~~~~~~r~q~n~---------------------------------------   41 (152)
                      ||++||+|... .+||+|+||.++.. .|.....+|||+|+                                       
T Consensus       106 ip~~Dp~~~~~-~~c~~~~Rs~~~~~-~~~~~~~~req~N~~T~~lD~S~vYGs~~~~~~~LR~~~~~G~L~~~~~~~~~  183 (530)
T PF03098_consen  106 IPPDDPFYRPF-VRCMPFTRSAPAPD-PGQSCSLPREQINQATSYLDLSQVYGSSEEQARRLRSSFKGGKLKSDNGEFPP  183 (530)
T ss_dssp             --TTEHHHHHT-TSEE--B-B-BSST-SSS-SSSSTTBEE-STSSSS-HHHH-SSHHHHHHTBESSTTTEB--ETSSEEB
T ss_pred             cCCCcccccCC-CCCccccccccccc-CCCCCccchhhhccccceeecccccCCCHHHHHHhhcchhhhhhhcccccccc
Confidence            68999999876 89999999999965 23332338999997                                       


Q ss_pred             ------------------------------------------hHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHhhcccc
Q psy8808          42 ------------------------------------------VKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHIN   79 (152)
Q Consensus        42 ------------------------------------------r~HN~~a~~l~~~~p~w~de~lf~~aR~i~~a~~q~I~   79 (152)
                                                                |||||||++|++.||+|+||+|||+||+||+|++|||+
T Consensus       184 ~~~~~~lp~~~~~~~~~~~~f~~GD~R~ne~~~l~~lhtlflReHNria~~L~~~np~w~de~lFqeAR~iv~a~~Q~Iv  263 (530)
T PF03098_consen  184 PNGGGLLPSDDPPTDSGCRCFLAGDPRVNENPGLTALHTLFLREHNRIADELKKINPHWDDERLFQEARRIVIAQYQHIV  263 (530)
T ss_dssp             BTTBES--B-TSCSSGHHGSB-TSSTTTTSBHHHHHHHHHHHHHHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhhhh
Confidence                                                      99999999999999999999999999999999999999


Q ss_pred             cccchhhhhhhcccc-c---------------cccCCCCHHHHHhhcccCCCeEEE
Q psy8808          80 YYEWLPIVVVTHWMD-A---------------SLVYGSDDELAAKLREFNGGRLAV  119 (152)
Q Consensus        80 ~~e~lP~lLgt~~iD-~---------------sl~ygss~~~a~~lR~f~~G~L~~  119 (152)
                      |+||||.+||.+.++ .               +..+....|+++++-+|.+.++.-
T Consensus       264 y~E~LP~llG~~~~~~~~~~~~~~g~~~~y~~~~~~~i~~EFa~aA~RfgHs~i~~  319 (530)
T PF03098_consen  264 YNEYLPALLGPEAMNKFLLPPLNNGYYKGYDPSVDPSISNEFAAAAYRFGHSMIPD  319 (530)
T ss_dssp             HHTTHHHHHGHGGHHHHS-G----GCGTTS-TTS--S-BTTH-HHHGGGGGGGS-S
T ss_pred             HhhhhhhhcchhhhhhccccccccccccCCCCCCCCchhHHHHHHHHHhhheeehh
Confidence            999999999987652 1               222344567788888887666553

Peroxidases are found in bacteria, fungi, plants and animals. On the basis of sequence similarity, a number of animal haem peroxidases can be categorised as members of a superfamily: myeloperoxidase (MPO); eosinophil peroxidase (EPO); lactoperoxidase (LPO); thyroid peroxidase (TPO); prostaglandin H synthase (PGHS); and peroxidasin [, , ]. MPO plays a major role in the oxygen-dependent microbicidal system of neutrophils. EPO from eosinophilic granulocytes participates in immunological reactions, and potentiates tumor necrosis factor (TNF) production and hydrogen peroxide release by human monocyte-derived macrophages [, ]. In the main, MPO (and possibly EPO) utilises Cl-ions and H2O2 to form hypochlorous acid (HOCl), which can effectively kill bacteria or parasites. In secreted fluids, LPO catalyses the oxidation of thiocyanate ions (SCN-) by H2O2, producing the weak oxidising agent hypothiocyanite (OSCN-), which has bacteriostatic activity []. TPO uses I- ions and H2O2 to generate iodine, and plays a central role in the biosynthesis of thyroid hormones T(3) and T(4). To date, the 3D structures of MPO and PGHS have been reported. MPO is a homodimer: each monomer consists of a light (A or B) and a heavy (C or D) chain resulting from post-translational excision of 6 residues from the common precursor. Monomers are linked by a single inter-chain disulphide. Each monomer includes a bound calcium ion []. PGHS exists as a symmetric dimer, each monomer of which consists of 3 domains: an N-terminal epidermal growth factor (EGF) like module; a membrane-binding domain; and a large C-terminal catalytic domain containing the cyclooxygenase and the peroxidase active sites. The catalytic domain shows striking structural similarity to MPO. The cyclooxygenase active site, which catalyses the formation of prostaglandin G2 (PGG2) from arachidonic acid, resides at the apex of a long hydrophobic channel, extending from the membrane-binding domain to the centre of the molecule. The peroxidase active site, which catalyses the reduction of PGG2 to PGH2, is located on the other side of the molecule, at the haem binding site []. Both MPO and the catalytic domain of PGHS are mainly alpha-helical, 19 helices being identified as topologically and spatially equivalent; PGHS contains 5 additional N-terminal helices that have no equivalent in MPO. In both proteins, three Asn residues in each monomer are glycosylated.; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1FE2_A 1PGG_B 1PGF_A 3N8W_B 1IGZ_A 3KK6_B 3N8Z_A 1Q4G_A 1PTH_A 1EQH_A ....

>PLN02283 alpha-dioxygenase

Probab=99.86  E-value=5.2e-22  Score=177.26  Aligned_cols=52  Identities=29%  Similarity=0.475  Sum_probs=50.1

Q ss_pred             hHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHhhcccccccchhhhhhhccc
Q psy8808          42 VKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWM   93 (152)
Q Consensus        42 r~HN~~a~~l~~~~p~w~de~lf~~aR~i~~a~~q~I~~~e~lP~lLgt~~i   93 (152)
                      |||||||++|+++||+|+||+|||+||+||+|++|||+|+||||.+||+..+
T Consensus       275 REHNrIad~L~~~nP~w~DE~LFQeAR~Iv~A~~q~I~~~EylP~iLg~~~~  326 (633)
T PLN02283        275 KEHNAVCDALKEEYPDFDDEELYRHARLVTSAVIAKIHTIDWTVELLKTDTL  326 (633)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHheeeeeeeccHHhcCCccc
Confidence            9999999999999999999999999999999999999999999999987654

>KOG2408|consensus

Probab=99.08  E-value=3.9e-11  Score=109.15  Aligned_cols=105  Identities=30%  Similarity=0.498  Sum_probs=87.9

Q ss_pred             HHHHHhhhcCCCCCch-HHHHHHHHHHHHhh-cccccccchhhhhhhccccccccCCCCHHHHHhhcccCC--CeEEEE-
Q psy8808          46 RIATVLGHLNPHWDDE-TLYQEARKILIAEY-SHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNG--GRLAVE-  120 (152)
Q Consensus        46 ~~a~~l~~~~p~w~de-~lf~~aR~i~~a~~-q~I~~~e~lP~lLgt~~iD~sl~ygss~~~a~~lR~f~~--G~L~~~-  120 (152)
                      .++..+...+|..... .|+..+|...+..- ++..++|+|.++  |+|+|+|++||++...+.+||.|.+  |+|++. 
T Consensus       262 C~pi~~p~~dp~~~~~~~C~~f~Rs~~~~~~~~~~~~reQlNq~--T~~lD~S~IYGss~~~~~~lR~f~~~~g~l~~~~  339 (719)
T KOG2408|consen  262 CFPIKIPPNDPYFPSNQRCLPFVRSLPACGSGYNLGPREQLNQL--TSFLDASVIYGSSDEDARKLRLFKDGKGLLRVDT  339 (719)
T ss_pred             ccceecCCCCCccCCcccceeceecCCCccccccCChhhhhccc--cccccchhccCCCHHHHHHHhcccCcccceeecc
Confidence            5556667777877764 69999999887653 589999999865  9999999999999999999999998  788887 


Q ss_pred             --cCCCCCCCCCCCCCCCCCCCCC--CCCCcccCCC
Q psy8808         121 --FRDGRPWPPAAANKSAVCDSKN--DALPCYQFGK  152 (152)
Q Consensus       121 --~~~g~~~lP~~~~~~~~C~~~~--~~~~CF~aGd  152 (152)
                        +.++..++|+..+++..|....  ....||.|||
T Consensus       340 ~~~~~~~~~lP~~~~~~~~c~~~~~~~~~~cf~aGD  375 (719)
T KOG2408|consen  340 GLFENGRPLLPFSTDPPNSCRSKPPGAPKPCFTAGD  375 (719)
T ss_pred             cccccCcccCCCCCCCCccccccCCCCCCcccccCc
Confidence              3578999999988888897655  4689999998

>PF03098 An_peroxidase: Animal haem peroxidase; InterPro: IPR002007 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions

Probab=98.10  E-value=8.7e-07  Score=78.43  Aligned_cols=81  Identities=27%  Similarity=0.458  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHh---hcccccccchhhhhhhccccccccCCCCHHHHHhhcc-cCCCeEEEE-----cCCCCCCCCCCC
Q psy8808          62 TLYQEARKILIAE---YSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLRE-FNGGRLAVE-----FRDGRPWPPAAA  132 (152)
Q Consensus        62 ~lf~~aR~i~~a~---~q~I~~~e~lP~lLgt~~iD~sl~ygss~~~a~~lR~-f~~G~L~~~-----~~~g~~~lP~~~  132 (152)
                      .|+..+|..+...   -+.+ ++|++...  |+|+|+|.+||++++.+..||+ +.+|+|++.     ..++..+||...
T Consensus       118 ~c~~~~Rs~~~~~~~~~~~~-~req~N~~--T~~lD~S~vYGs~~~~~~~LR~~~~~G~L~~~~~~~~~~~~~~~lp~~~  194 (530)
T PF03098_consen  118 RCMPFTRSAPAPDPGQSCSL-PREQINQA--TSYLDLSQVYGSSEEQARRLRSSFKGGKLKSDNGEFPPPNGGGLLPSDD  194 (530)
T ss_dssp             SEE--B-B-BSSTSSS-SSS-STTBEE-S--TSSSS-HHHH-SSHHHHHHTBESSTTTEB--ETSSEEBBTTBES--B-T
T ss_pred             CCcccccccccccCCCCCcc-chhhhccc--cceeecccccCCCHHHHHHhhcchhhhhhhcccccccccCCCCCCCCCc
Confidence            3555566555422   1223 88999866  9999999999999999999999 999999983     246778899876


Q ss_pred             CCC-CCCCCCCCCCCcccCCC
Q psy8808         133 NKS-AVCDSKNDALPCYQFGK  152 (152)
Q Consensus       133 ~~~-~~C~~~~~~~~CF~aGd  152 (152)
                      .+. +.|       .||.|||
T Consensus       195 ~~~~~~~-------~~f~~GD  208 (530)
T PF03098_consen  195 PPTDSGC-------RCFLAGD  208 (530)
T ss_dssp             SCSSGHH-------GSB-TSS
T ss_pred             ccccccc-------ccccccc
Confidence            221 234       7999998

Peroxidases are found in bacteria, fungi, plants and animals. On the basis of sequence similarity, a number of animal haem peroxidases can be categorised as members of a superfamily: myeloperoxidase (MPO); eosinophil peroxidase (EPO); lactoperoxidase (LPO); thyroid peroxidase (TPO); prostaglandin H synthase (PGHS); and peroxidasin [, , ]. MPO plays a major role in the oxygen-dependent microbicidal system of neutrophils. EPO from eosinophilic granulocytes participates in immunological reactions, and potentiates tumor necrosis factor (TNF) production and hydrogen peroxide release by human monocyte-derived macrophages [, ]. In the main, MPO (and possibly EPO) utilises Cl-ions and H2O2 to form hypochlorous acid (HOCl), which can effectively kill bacteria or parasites. In secreted fluids, LPO catalyses the oxidation of thiocyanate ions (SCN-) by H2O2, producing the weak oxidising agent hypothiocyanite (OSCN-), which has bacteriostatic activity []. TPO uses I- ions and H2O2 to generate iodine, and plays a central role in the biosynthesis of thyroid hormones T(3) and T(4). To date, the 3D structures of MPO and PGHS have been reported. MPO is a homodimer: each monomer consists of a light (A or B) and a heavy (C or D) chain resulting from post-translational excision of 6 residues from the common precursor. Monomers are linked by a single inter-chain disulphide. Each monomer includes a bound calcium ion []. PGHS exists as a symmetric dimer, each monomer of which consists of 3 domains: an N-terminal epidermal growth factor (EGF) like module; a membrane-binding domain; and a large C-terminal catalytic domain containing the cyclooxygenase and the peroxidase active sites. The catalytic domain shows striking structural similarity to MPO. The cyclooxygenase active site, which catalyses the formation of prostaglandin G2 (PGG2) from arachidonic acid, resides at the apex of a long hydrophobic channel, extending from the membrane-binding domain to the centre of the molecule. The peroxidase active site, which catalyses the reduction of PGG2 to PGH2, is located on the other side of the molecule, at the haem binding site []. Both MPO and the catalytic domain of PGHS are mainly alpha-helical, 19 helices being identified as topologically and spatially equivalent; PGHS contains 5 additional N-terminal helices that have no equivalent in MPO. In both proteins, three Asn residues in each monomer are glycosylated.; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1FE2_A 1PGG_B 1PGF_A 3N8W_B 1IGZ_A 3KK6_B 3N8Z_A 1Q4G_A 1PTH_A 1EQH_A ....

>PLN02283 alpha-dioxygenase

Probab=97.64  E-value=3.7e-05  Score=69.66  Aligned_cols=56  Identities=25%  Similarity=0.328  Sum_probs=43.4

Q ss_pred             cccchhhhhhhccccccccCCCCHHHHHhhcccCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCcccCCC
Q psy8808          80 YYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKNDALPCYQFGK  152 (152)
Q Consensus        80 ~~e~lP~lLgt~~iD~sl~ygss~~~a~~lR~f~~G~L~~~~~~g~~~lP~~~~~~~~C~~~~~~~~CF~aGd  152 (152)
                      ..+++...  |+|+|+|.+||++++.+..||+|.+|+|++..   ..++|...     +       .||.|||
T Consensus       203 ~~~qiN~~--Ts~lD~S~IYGss~~~~~~LRtf~~GkLk~~~---~~~l~~~~-----~-------~~~~~Gd  258 (633)
T PLN02283        203 KTGSLNIR--TPWWDGSVIYGSNEKGLRRVRTFKDGKLKISE---DGLLLHDE-----D-------GIPISGD  258 (633)
T ss_pred             Cccccccc--cceeecccccCCCHHHHHhhhCCCCCccCcCC---CCCCCCCc-----c-------CCcccCc
Confidence            45666544  99999999999999999999999999999853   23555431     1       3888887

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	152
3f9p_C	467	Crystal Structure Of Myeloperoxidase From Human Leu		7e-10
1myp_C	466	X-Ray Crystal Structure Of Canine Myeloperoxidase A		8e-10
1cxp_C	466	Cryogenic Crystal Structure Of Human Myeloperoxidas		8e-10
2ikc_A	595	Crystal Structure Of Sheep Lactoperoxidase At 3.25		2e-09
2ikc_A	595	Crystal Structure Of Sheep Lactoperoxidase At 3.25		8e-05
3r5q_A	595	Crystal Structure Of Sheep Lactoperoxidase In Compl		2e-09
3r5q_A	595	Crystal Structure Of Sheep Lactoperoxidase In Compl		1e-04
2e9e_A	595	Crystal Structure Of The Complex Of Goat Lactoperox		2e-09
2e9e_A	595	Crystal Structure Of The Complex Of Goat Lactoperox		7e-05
2r5l_A	595	Crystal Structure Of Lactoperoxidase At 2.4a Resolu		2e-09
2r5l_A	595	Crystal Structure Of Lactoperoxidase At 2.4a Resolu		9e-05
2gjm_A	583	Crystal Structure Of Buffalo Lactoperoxidase At 2.7		7e-09
2gj1_A	583	Crystal Structure Of Bovine Lactoperoxidase At 2.3a		7e-09
3erh_A	595	First Structural Evidence Of Substrate Specificity		7e-09
2ips_A	595	Crystal Structure Of A Ternary Complex Of Bovine La		8e-09
2pt3_A	595	Crystal Structure Of Bovine Lactoperoxidase At 2.34		8e-09
2z5z_A	595	Crystal Structure Of The Complex Of Buffalo Lactope		1e-08
2o86_A	595	Crystal Structure Of A Ternary Complex Of Buffalo L		1e-08
1ebv_A	551	Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid		9e-05
1ht5_A	551	The 2.75 Angstrom Resolution Model Of Ovine Cox-1 C		9e-05
3n8w_B	553	Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1 H		9e-05
3n8y_B	553	Structure Of Aspirin Acetylated Cyclooxygenase-1 In		9e-05
1diy_A	553	Crystal Structure Of Arachidonic Acid Bound In The		1e-04
1pge_A	576	Prostaglandin H2 Synthase-1 Complexed With P-(2'-Io		1e-04
2oye_P	600	Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To		1e-04
1pth_A	576	The Structural Basis Of Aspirin Activity Inferred F		1e-04
1cqe_A	580	Prostaglandin H2 Synthase-1 Complex With Flurbiprof		1e-04
1ddx_A	552	Crystal Structure Of A Mixture Of Arachidonic Acid		2e-04
3rr3_A	560	Structure Of (R)-Flurbiprofen Bound To Mcox-2 Lengt		2e-04
3mdl_A	587	X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol		2e-04
3tzi_A	593	X-Ray Crystal Structure Of Arachidonic Acid Bound I		2e-04
3olt_A	592	X-Ray Crystal Structure Of Arachidonic Acid Bound T		2e-04
3krk_A	591	X-Ray Crystal Structure Of Arachidonic Acid Bound I		2e-04
3hs5_A	591	X-Ray Crystal Structure Of Arachidonic Acid Bound T		2e-04
3nt1_A	587	High Resolution Structure Of Naproxen:cox-2 Complex		2e-04
1pxx_A	604	Crystal Structure Of Diclofenac Bound To The Cycloo		2e-04
3qh0_A	610	X-Ray Crystal Structure Of Palmitic Acid Bound To T		2e-04
1u67_A	600	Crystal Structure Of Arachidonic Acid Bound To A Mu		3e-04

>pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes Length = 467

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 31  PGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           P  T    ++  +HNR+AT L  LNP WD E LYQEARKI+ A    I Y ++LP+V+
Sbjct: 132 PELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVL 189

>pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3 Angstroms Resolution Length = 466

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 31  PGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           P  T    ++  +HNR+AT L  LNP WD E LYQEARKI+ A    I Y ++LP+V+
Sbjct: 132 PELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVL 189

>pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase Isoform C Length = 466

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 31  PGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           P  T    ++  +HNR+AT L  LNP WD E LYQEARKI+ A    I Y ++LP+V+
Sbjct: 132 PELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVL 189

>pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A Resolution Reveals The Binding Sites For Formate Length = 595

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 39  MIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           ++  +HNR+A  L  LNPHWD E LYQEARKIL A    I + ++LPIV+
Sbjct: 268 LLLREHNRLARELKRLNPHWDGEKLYQEARKILGAFIQIITFRDYLPIVL 317

>pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A Resolution Reveals The Binding Sites For Formate Length = 595

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 86  IVVVTHWMDASLVYGSDDELAAKLREFNG--GRLAVE---FRDGRPWPPAAANKSAVCDS 140
           I  VT ++DASLVYGS+  LA++LR  +   G +AV    +  G  +PP    K + C+ 
Sbjct: 180 INSVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNMKPSPCEF 239
Query: 141 KNDA--LPCYQFG 151
            N    +PC+Q G
Sbjct: 240 INTTARVPCFQAG 252

>pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With Tetrahydrofuran At 2.7 A Resolution Length = 595

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 39  MIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           ++  +HNR+A  L  LNPHWD E LYQEARKIL A    I + ++LPIV+
Sbjct: 268 LLLREHNRLARELKRLNPHWDGEKLYQEARKILGAFIQIITFRDYLPIVL 317

>pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With Tetrahydrofuran At 2.7 A Resolution Length = 595

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 86  IVVVTHWMDASLVYGSDDELAAKLREFNG--GRLAVE---FRDGRPWPPAAANKSAVCDS 140
           I  VT ++DASLVYGS+  LA++LR  +   G +AV    +  G  +PP    K + C+ 
Sbjct: 180 INSVTSFLDASLVYGSEPXLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNMKPSPCEF 239
Query: 141 KNDA--LPCYQFG 151
            N    +PC+Q G
Sbjct: 240 INTTARVPCFQAG 252

>pdb|2E9E|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase With Nitrate At 3.25 A Resolution Length = 595

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 39  MIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           ++  +HNR+A  L  LNPHWD E LYQEARKIL A    I + ++LPIV+
Sbjct: 268 LLLREHNRLARELKRLNPHWDGEMLYQEARKILGAFIQIITFRDYLPIVL 317

>pdb|2E9E|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase With Nitrate At 3.25 A Resolution Length = 595

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 86  IVVVTHWMDASLVYGSDDELAAKLREFNG--GRLAVE---FRDGRPWPPAAANKSAVCDS 140
           I  VT ++DASLVYGS+  LA++LR  +   G +AV    +  G  +PP    K + C+ 
Sbjct: 180 INAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNVKPSPCEF 239
Query: 141 KNDA--LPCYQFG 151
            N    +PC+Q G
Sbjct: 240 INTTAHVPCFQAG 252

>pdb|2R5L|A Chain A, Crystal Structure Of Lactoperoxidase At 2.4a Resolution Length = 595

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 39  MIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           ++  +HNR+A  L  LNPHWD E LYQEARKIL A    I + ++LPIV+
Sbjct: 268 LLLREHNRLARELKRLNPHWDGEMLYQEARKILGAFIQIITFRDYLPIVL 317

>pdb|2R5L|A Chain A, Crystal Structure Of Lactoperoxidase At 2.4a Resolution Length = 595

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 86  IVVVTHWMDASLVYGSDDELAAKLREFNG--GRLAVE---FRDGRPWPPAAANKSAVCDS 140
           I  VT ++DASLVYGS+  LA++LR  +   G +AV    +  G  +PP    K + C+ 
Sbjct: 180 INAVTSFLDASLVYGSEPXLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNVKPSPCEF 239
Query: 141 KNDA--LPCYQFG 151
            N    +PC+Q G
Sbjct: 240 INTTAHVPCFQAG 252

>pdb|2GJM|A Chain A, Crystal Structure Of Buffalo Lactoperoxidase At 2.75a Resolution Length = 583

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 43  KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           +HNR+A  L  LNPHW+ E LYQEARKIL A    I + ++LPIV+
Sbjct: 260 EHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVL 305

>pdb|2GJ1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.3a Resolution Length = 583

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 43  KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           +HNR+A  L  LNPHW+ E LYQEARKIL A    I + ++LPIV+
Sbjct: 260 EHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVL 305

>pdb|3ERH|A Chain A, First Structural Evidence Of Substrate Specificity In Mammalian Peroxidases: Crystal Structures Of Substrate Complexes With Lactoperoxidases From Two Different Species Length = 595

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 43  KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           +HNR+A  L  LNPHW+ E LYQEARKIL A    I + ++LPIV+
Sbjct: 272 EHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVL 317

>pdb|2IPS|A Chain A, Crystal Structure Of A Ternary Complex Of Bovine Lactoperoxidase With Thiocyanate And Iodide At 3.1 A Resolution Length = 595

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 43  KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           +HNR+A  L  LNPHW+ E LYQEARKIL A    I + ++LPIV+
Sbjct: 272 EHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVL 317

>pdb|2PT3|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.34 A Resolution Reveals Multiple Anion Binding Sites Length = 595

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 43  KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           +HNR+A  L  LNPHW+ E LYQEARKIL A    I + ++LPIV+
Sbjct: 272 EHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVL 317

>pdb|2Z5Z|A Chain A, Crystal Structure Of The Complex Of Buffalo Lactoperoxidase With Fluoride Ion At 3.5a Resolution Length = 595

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 43  KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           +HNR+A  L  LNP WD E LYQEARKIL A    I + ++LPIV+
Sbjct: 272 EHNRLARELKKLNPQWDGEKLYQEARKILGAFVQIITFRDYLPIVL 317

>pdb|2O86|A Chain A, Crystal Structure Of A Ternary Complex Of Buffalo Lactoperoxidase With Nitrate And Iodide At 2.8 A Resolution Length = 595

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 43  KHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVV 88
           +HNR+A  L  LNP WD E LYQEARKIL A    I + ++LPIV+
Sbjct: 272 EHNRLARELKKLNPQWDGEKLYQEARKILGAFVQIITFRDYLPIVL 317

>pdb|1EBV|A Chain A, Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid Length = 551

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHI---NYYEWL 84
           G  PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I    Y + L
Sbjct: 261 GLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQL 320
Query: 85  PIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAV 137
               +    D  L++G+  +           R+A+EF     W P   +   V
Sbjct: 321 SGYFLQLKFDPELLFGAQFQYR--------NRIAMEFNQLYHWHPLMPDSFRV 365

>pdb|1HT5|A Chain A, The 2.75 Angstrom Resolution Model Of Ovine Cox-1 Complexed With Methyl Ester Flurbiprofen Length = 551

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHI---NYYEWL 84
           G  PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I    Y + L
Sbjct: 261 GLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQL 320
Query: 85  PIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAV 137
               +    D  L++G+  +           R+A+EF     W P   +   V
Sbjct: 321 SGYFLQLKFDPELLFGAQFQYR--------NRIAMEFNQLYHWHPLMPDSFRV 365

>pdb|3N8W|B Chain B, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1 Heterodimer Mutant In Complex With Flurbiprofen Length = 553

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHI---NYYEWL 84
           G  PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I    Y + L
Sbjct: 262 GLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQL 321
Query: 85  PIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAV 137
               +    D  L++G+  +           R+A+EF     W P   +   V
Sbjct: 322 SGYFLQLKFDPELLFGAQFQYR--------NRIAMEFNQLYHWHPLMPDSFRV 366

>pdb|3N8Y|B Chain B, Structure Of Aspirin Acetylated Cyclooxygenase-1 In Complex With Diclofenac Length = 553

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHI---NYYEWL 84
           G  PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I    Y + L
Sbjct: 262 GLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQL 321
Query: 85  PIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAV 137
               +    D  L++G+  +           R+A+EF     W P   +   V
Sbjct: 322 SGYFLQLKFDPELLFGAQFQYR--------NRIAMEFNQLYHWHPLMPDSFRV 366

>pdb|1DIY|A Chain A, Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Active Site Of Pghs-1 Length = 553

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHI---NYYEWL 84
           G  PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I    Y + L
Sbjct: 262 GLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQL 321
Query: 85  PIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAV 137
               +    D  L++G+  +           R+A+EF     W P   +   V
Sbjct: 322 SGYFLQLKFDPELLFGAQFQYR--------NRIAMEFNQLYHWHPLMPDSFRV 366

>pdb|1PGE|A Chain A, Prostaglandin H2 Synthase-1 Complexed With P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen) Length = 576

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHI---NYYEWL 84
           G  PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I    Y + L
Sbjct: 269 GLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQL 328
Query: 85  PIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAV 137
               +    D  L++G+  +           R+A+EF     W P   +   V
Sbjct: 329 SGYFLQLKFDPELLFGAQFQYR--------NRIAMEFNQLYHWHPLMPDSFRV 373

>pdb|2OYE|P Chain P, Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To Cyclooxygenase-1 Length = 600

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHI---NYYEWL 84
           G  PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I    Y + L
Sbjct: 293 GLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQL 352
Query: 85  PIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAV 137
               +    D  L++G+  +           R+A+EF     W P   +   V
Sbjct: 353 SGYFLQLKFDPELLFGAQFQYR--------NRIAMEFNQLYHWHPLMPDSFRV 397

>pdb|1PTH|A Chain A, The Structural Basis Of Aspirin Activity Inferred From The Crystal Structure Of Inactivated Prostaglandin H2 Synthase Length = 576

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHI---NYYEWL 84
           G  PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I    Y + L
Sbjct: 269 GLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQL 328
Query: 85  PIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAV 137
               +    D  L++G+  +           R+A+EF     W P   +   V
Sbjct: 329 SGYFLQLKFDPELLFGAQFQYR--------NRIAMEFNQLYHWHPLMPDSFRV 373

>pdb|1CQE|A Chain A, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen Length = 580

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHI---NYYEWL 84
           G  PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I    Y + L
Sbjct: 273 GLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQL 332
Query: 85  PIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAV 137
               +    D  L++G+  +           R+A+EF     W P   +   V
Sbjct: 333 SGYFLQLKFDPELLFGAQFQYR--------NRIAMEFNQLYHWHPLMPDSFRV 377

>pdb|1DDX|A Chain A, Crystal Structure Of A Mixture Of Arachidonic Acid And Prostaglandin Bound To The Cyclooxygenase Active Site Of Cox-2: Prostaglandin Structure Length = 552

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           G  PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   ++    
Sbjct: 262 GLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDY---- 317
Query: 88  VVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSK 141
            V H          D EL    +     R+A EF     W P   +   + D +
Sbjct: 318 -VQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQE 370

>pdb|3RR3|A Chain A, Structure Of (R)-Flurbiprofen Bound To Mcox-2 Length = 560

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           G  PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   ++    
Sbjct: 262 GLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDY---- 317
Query: 88  VVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSK 141
            V H          D EL    +     R+A EF     W P   +   + D +
Sbjct: 318 -VQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQE 370

>pdb|3MDL|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 587

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           G  PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   ++    
Sbjct: 267 GLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDY---- 322
Query: 88  VVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSK 141
            V H          D EL    +     R+A EF     W P   +   + D +
Sbjct: 323 -VQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQE 375

>pdb|3TZI|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of G533v Murine Cox-2 Length = 593

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           G  PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   ++    
Sbjct: 268 GLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDY---- 323
Query: 88  VVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSK 141
            V H          D EL    +     R+A EF     W P   +   + D +
Sbjct: 324 -VQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQE 376

>pdb|3OLT|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of R513h Murine Cox-2 Length = 592

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           G  PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   ++    
Sbjct: 267 GLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDY---- 322
Query: 88  VVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSK 141
            V H          D EL    +     R+A EF     W P   +   + D +
Sbjct: 323 -VQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQE 375

>pdb|3KRK|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of L531f Murine Cox-2 Length = 591

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           G  PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   ++    
Sbjct: 266 GLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDY---- 321
Query: 88  VVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSK 141
            V H          D EL    +     R+A EF     W P   +   + D +
Sbjct: 322 -VQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQE 374

>pdb|3HS5|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 591

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           G  PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   ++    
Sbjct: 266 GLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDY---- 321
Query: 88  VVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSK 141
            V H          D EL    +     R+A EF     W P   +   + D +
Sbjct: 322 -VQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQE 374

>pdb|3NT1|A Chain A, High Resolution Structure Of Naproxen:cox-2 Complex. Length = 587

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           G  PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   ++    
Sbjct: 262 GLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDY---- 317
Query: 88  VVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSK 141
            V H          D EL    +     R+A EF     W P   +   + D +
Sbjct: 318 -VQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQE 370

>pdb|1PXX|A Chain A, Crystal Structure Of Diclofenac Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 604

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           G  PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   ++    
Sbjct: 279 GLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDY---- 334
Query: 88  VVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSK 141
            V H          D EL    +     R+A EF     W P   +   + D +
Sbjct: 335 -VQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQE 387

>pdb|3QH0|A Chain A, X-Ray Crystal Structure Of Palmitic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 610

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIV 87
           G  PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   ++    
Sbjct: 285 GLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDY---- 340
Query: 88  VVTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSK 141
            V H          D EL    +     R+A EF     W P   +   + D +
Sbjct: 341 -VQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQE 393

>pdb|1U67|A Chain A, Crystal Structure Of Arachidonic Acid Bound To A Mutant Of Prostagladin H Synthase-1 That Forms Predominantly 11-hpete Length = 600

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 28  GCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHI---NYYEWL 84
           G  PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I    Y + L
Sbjct: 293 GLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYAQQL 352
Query: 85  PIVVVTHWMDASLVYGSDDELAAKL-REFN 113
               +    D  L++G+  +   ++  EFN
Sbjct: 353 SGYFLQLKFDPELLFGAQFQYRNRIAMEFN 382

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	1e-18
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	1e-11
1d2v_C	466	Myeloperoxidase; heme-protein, oxidoreductase, per	4e-18
1d2v_C	466	Myeloperoxidase; heme-protein, oxidoreductase, per	1e-12
3q9k_A	595	Lactoperoxidase, LPO; bovine lactoperoxidase, oxid	4e-18
3q9k_A	595	Lactoperoxidase, LPO; bovine lactoperoxidase, oxid	9e-07
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	1e-17
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	3e-12

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* 3krk_A* ... Length = 587

 Score = 80.5 bits (198), Expect = 1e-18
 Identities = 19/65 (29%), Positives = 31/65 (47%)

Query: 30  NPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVV 89
            PG      +   +HNR+  +L   +P W DE L+Q +R ILI E   I   +++  +  
Sbjct: 264 VPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSG 323

Query: 90  THWMD 94
            H+  
Sbjct: 324 YHFKL 328

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* 3krk_A* ... Length = 587

 Score = 60.5 bits (146), Expect = 1e-11
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 89  VTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVC--DSKNDALP 146
           + H +D + +YG   +   KLR F  G+L  +   G  +PP   +               
Sbjct: 193 LGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENL 252

Query: 147 CYQFGK 152
            +  G+
Sbjct: 253 QFAVGQ 258

>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Length = 466

 Score = 78.7 bits (193), Expect = 4e-18
 Identities = 30/71 (42%), Positives = 39/71 (54%)

Query: 23  TDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYE 82
            D      P  T    ++  +HNR+AT L  LNP WD E LYQEARKI+ A    I Y +
Sbjct: 124 GDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRD 183

Query: 83  WLPIVVVTHWM 93
           +LP+V+    M
Sbjct: 184 YLPLVLGPTAM 194

>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Length = 466

 Score = 63.3 bits (153), Expect = 1e-12
 Identities = 27/154 (17%), Positives = 41/154 (26%), Gaps = 56/154 (36%)

Query: 2   PDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDE 61
           P +DP     +  C+ F RS            T   Q+  +                   
Sbjct: 19  PPNDPRIK-NQADCIPFFRSCPACPGS---NITIRNQINAL------------------- 55

Query: 62  TLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRLAVEF 121
                                       T ++DAS+VYGS++ LA  LR  +     +  
Sbjct: 56  ----------------------------TSFVDASMVYGSEEPLARNLRNMSNQLGLLAV 87

Query: 122 -----RDGRPWPPAAANKSAVCDSKNDALPCYQF 150
                 +GR   P        C   N +     F
Sbjct: 88  NQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCF 121

>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Length = 595

 Score = 78.9 bits (193), Expect = 4e-18
 Identities = 28/93 (30%), Positives = 38/93 (40%)

Query: 2   PDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDE 61
                                 D           A  ++  +HNR+A  L  LNPHW+ E
Sbjct: 231 NKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGE 290

Query: 62  TLYQEARKILIAEYSHINYYEWLPIVVVTHWMD 94
            LYQEARKIL A    I + ++LPIV+ +    
Sbjct: 291 KLYQEARKILGAFIQIITFRDYLPIVLGSEMQK 323

>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Length = 595

 Score = 46.1 bits (108), Expect = 9e-07
 Identities = 29/156 (18%), Positives = 43/156 (27%), Gaps = 54/156 (34%)

Query: 1   MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDD 60
            P +DP      + CM F R+               EQ+  V                  
Sbjct: 144 FPKNDPKLKTQGK-CMPFFRAGFVCPTPPYQS-LAREQINAV------------------ 183

Query: 61  ETLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNGGRL--- 117
                                        T ++DASLVYGS+  LA++LR  +       
Sbjct: 184 -----------------------------TSFLDASLVYGSEPSLASRLRNLSSPLGLMA 214

Query: 118 --AVEFRDGRPWPPAAANKSAVCDSKNDALPCYQFG 151
                +  G  + P    K + C+  N       F 
Sbjct: 215 VNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFL 250

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Length = 553

 Score = 77.4 bits (190), Expect = 1e-17
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 30  NPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVV 89
            PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I   E++  +  
Sbjct: 264 LPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSG 323

Query: 90  THWM---DASLVYGSDDE 104
                  D  L++G+  +
Sbjct: 324 YFLQLKFDPELLFGAQFQ 341

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Length = 553

 Score = 62.0 bits (150), Expect = 3e-12
 Identities = 15/62 (24%), Positives = 26/62 (41%)

Query: 89  VTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKNDALPCY 148
           + H +D   +YG + E   +LR F  G+L  +  +G  +PP+      +        P  
Sbjct: 193 LGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQS 252

Query: 149 QF 150
           Q 
Sbjct: 253 QM 254

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
3q9k_A	595	Lactoperoxidase, LPO; bovine lactoperoxidase, oxid	99.96
1d2v_C	466	Myeloperoxidase; heme-protein, oxidoreductase, per	99.96
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	99.78
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	99.78
3q9k_A	595	Lactoperoxidase, LPO; bovine lactoperoxidase, oxid	98.96
1d2v_C	466	Myeloperoxidase; heme-protein, oxidoreductase, per	98.95
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	98.48
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	98.37

>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...

Probab=99.96  E-value=7.7e-30  Score=225.26  Aligned_cols=115  Identities=32%  Similarity=0.446  Sum_probs=96.2

Q ss_pred             CCCCCcccCCCCCeeeecccCccccCCCCCCCCCchhhchh---------------------------------------
Q psy8808           1 MPDDDPVYSKFRQVCMNFVRSTTDIDQGCNPGYTPAEQMIQ---------------------------------------   41 (152)
Q Consensus         1 vp~~D~~~~~~~~~c~~~~Rs~~~~~~~c~~~~~~r~q~n~---------------------------------------   41 (152)
                      ||++||+|...+ .||+|+||.+++. +|.+++.+|||||+                                       
T Consensus       144 ip~~Dp~~~~~~-~Cm~f~RS~~~~~-~~~~~~~~reQiN~~Ts~lD~S~VYGss~~~~~~LR~~~~~~G~Lk~~~~~~~  221 (595)
T 3q9k_A          144 FPKNDPKLKTQG-KCMPFFRAGFVCP-TPPYQSLAREQINAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWD  221 (595)
T ss_dssp             CCTTCHHHHHSC-SEECCBCBCBSSC-SSCCCSSCCCBEECSCSSSSCHHHHCSSHHHHHHTBCCSSTTCCBCCCSSCCB
T ss_pred             CCCCCCcccCCC-ceeEeecCCCcCC-CCCCCcchHhhhccccceeeeeeccCCCHHHHHHHhCCCCCCceeecccccCC
Confidence            799999996555 4999999999865 46665569999998                                       


Q ss_pred             -------------------------------------------------hHHHHHHHHhhhcCCCCCchHHHHHHHHHHH
Q psy8808          42 -------------------------------------------------VKHNRIATVLGHLNPHWDDETLYQEARKILI   72 (152)
Q Consensus        42 -------------------------------------------------r~HN~~a~~l~~~~p~w~de~lf~~aR~i~~   72 (152)
                                                                       |||||||++|+++||+|+||+|||+||+|||
T Consensus       222 ~g~~~lP~~~~~~~~c~~~~~~~~~~cf~aGD~R~ne~p~L~~lhtlflREHNria~~L~~~nP~W~dE~LfQeAR~Iv~  301 (595)
T 3q9k_A          222 HGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILG  301 (595)
T ss_dssp             TTBCCCCBCCCSSCHHHHTCTTTCCCCBCCSSTTTTSBHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCCCCcccccCCCCCCcccccCCccccccHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence                                                             9999999999999999999999999999999


Q ss_pred             Hhhcccccccchhhhhhhcc---c------cccccCCCCHHHHHhhcccCCCeEE
Q psy8808          73 AEYSHINYYEWLPIVVVTHW---M------DASLVYGSDDELAAKLREFNGGRLA  118 (152)
Q Consensus        73 a~~q~I~~~e~lP~lLgt~~---i------D~sl~ygss~~~a~~lR~f~~G~L~  118 (152)
                      |++|||||+||||.|||..+   +      +.++.++.+.++ +++.+|.+.++.
T Consensus       302 A~~Q~Ity~E~LP~ilG~~~~~~~~~~~gY~~~v~p~i~neF-~aafRfgHsli~  355 (595)
T 3q9k_A          302 AFIQIITFRDYLPIVLGSEMQKWIPPYQGYNNSVDPRISNVF-TFAFRFGHMEVP  355 (595)
T ss_dssp             HHHHHHHHHTHHHHHHGGGHHHHSCSCCCCCTTSCCCCBTTH-HHHGGGGGGGCC
T ss_pred             HHeeeeeHHHHHHHHhCchhhhhCCCccCCCCCCCCccHHHH-HHHHHhHHhhCc
Confidence            99999999999999999872   1      234456666788 777777655443

>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*

Probab=99.96  E-value=2e-29  Score=217.35  Aligned_cols=76  Identities=37%  Similarity=0.534  Sum_probs=65.7

Q ss_pred             hHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHhhcccccccchhhhhhhccc----------cccccCCCCHHHHHhhcc
Q psy8808          42 VKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWM----------DASLVYGSDDELAAKLRE  111 (152)
Q Consensus        42 r~HN~~a~~l~~~~p~w~de~lf~~aR~i~~a~~q~I~~~e~lP~lLgt~~i----------D~sl~ygss~~~a~~lR~  111 (152)
                      |||||||++|++.||+|+||+|||+||+||||++|||+|+||||.|||...+          +.+..++.+.++ +++-+
T Consensus       143 ReHNria~~L~~~nP~W~DE~LFqeAR~Iv~a~~Q~I~~~EyLp~ilG~~~~~~~~~~~~gy~~~v~p~isnEF-~aafR  221 (466)
T 1d2v_C          143 REHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVF-TNAFR  221 (466)
T ss_dssp             HHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHSCCCCCCCTTSCCSCBHHH-HHHGG
T ss_pred             HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHhCchhhhhcCCcccCCCCCCCCchhHHH-HHHHh
Confidence            9999999999999999999999999999999999999999999999996543          224556777889 77888


Q ss_pred             cCCCeEE
Q psy8808         112 FNGGRLA  118 (152)
Q Consensus       112 f~~G~L~  118 (152)
                      |.+.++.
T Consensus       222 fgHsli~  228 (466)
T 1d2v_C          222 YGHTLIQ  228 (466)
T ss_dssp             GGGGGCC
T ss_pred             cccccCc
Confidence            8665544

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=99.78  E-value=7e-20  Score=161.53  Aligned_cols=52  Identities=33%  Similarity=0.579  Sum_probs=49.6

Q ss_pred             hHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHhhcccccccchhhhhhhccc
Q psy8808          42 VKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWM   93 (152)
Q Consensus        42 r~HN~~a~~l~~~~p~w~de~lf~~aR~i~~a~~q~I~~~e~lP~lLgt~~i   93 (152)
                      |||||||++|+++||+|+||+|||+||+||||++|||+|+||||.|+|..++
T Consensus       276 REHNriA~~L~~~nP~W~DE~LFQeAR~Iv~A~~Q~Ity~EyLP~ilG~~~~  327 (587)
T 3nt1_A          276 REHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFK  327 (587)
T ss_dssp             HHHHHHHHHHHC-CTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCSSC
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhhheeeeHHHHHHHhcCcchh
Confidence            9999999999999999999999999999999999999999999999998764

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=99.78  E-value=9.7e-20  Score=159.84  Aligned_cols=67  Identities=30%  Similarity=0.387  Sum_probs=57.8

Q ss_pred             hHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHhhcccccccchhhhhhhccc---ccc--------ccCCCCHHHHHh
Q psy8808          42 VKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWM---DAS--------LVYGSDDELAAK  108 (152)
Q Consensus        42 r~HN~~a~~l~~~~p~w~de~lf~~aR~i~~a~~q~I~~~e~lP~lLgt~~i---D~s--------l~ygss~~~a~~  108 (152)
                      |||||||++|+++||+|+||+|||+||+||||++|||+|+||||.++|..+.   |-+        ..+..+.+++..
T Consensus       276 ReHNria~~L~~~nP~W~DE~LFQeAR~Iv~a~~Q~I~~~EyLp~ilg~~~~~~~dp~~~~~~~~~~~~~is~EF~~a  353 (553)
T 1q4g_A          276 REHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGAQFQYRNRIAMEFNQL  353 (553)
T ss_dssp             HHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCSSCCCCCGGGGTTSCCCCCCCCBHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCcccccCCCcccCcchhHHHHHH
Confidence            9999999999999999999999999999999999999999999999998764   222        223456777664

>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...

Probab=98.96  E-value=1.6e-10  Score=102.20  Aligned_cols=71  Identities=35%  Similarity=0.639  Sum_probs=61.6

Q ss_pred             cccchhhhhhhccccccccCCCCHHHHHhhcccCC--CeEEEEcC---CCCCCCCCCCCCCCCCCC--CCCCCCcccCCC
Q psy8808          80 YYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNG--GRLAVEFR---DGRPWPPAAANKSAVCDS--KNDALPCYQFGK  152 (152)
Q Consensus        80 ~~e~lP~lLgt~~iD~sl~ygss~~~a~~lR~f~~--G~L~~~~~---~g~~~lP~~~~~~~~C~~--~~~~~~CF~aGd  152 (152)
                      ++|+|.++  |+|+|+|.+||++++.+..||+|++  |+|++...   +|..|||+..+....|..  .....+||.|||
T Consensus       176 ~reQiN~~--Ts~lD~S~VYGss~~~~~~LR~~~~~~G~Lk~~~~~~~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~aGD  253 (595)
T 3q9k_A          176 AREQINAV--TSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGD  253 (595)
T ss_dssp             CCCBEECS--CSSSSCHHHHCSSHHHHHHTBCCSSTTCCBCCCSSCCBTTBCCCCBCCCSSCHHHHTCTTTCCCCBCCSS
T ss_pred             hHhhhccc--cceeeeeeccCCCHHHHHHHhCCCCCCceeecccccCCCCccCCCCCCCCCCcccccCCCCCCcccccCC
Confidence            88999876  9999999999999999999999998  99998654   789999998877778842  234678999998

>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*

Probab=98.95  E-value=3e-11  Score=104.08  Aligned_cols=99  Identities=27%  Similarity=0.436  Sum_probs=74.8

Q ss_pred             hhcCCCCCch-HHHHHHHHHHHHhhcccccccchhhhhhhccccccccCCCCHHHHHhhcccCC--CeEEEEc--C-CCC
Q psy8808          52 GHLNPHWDDE-TLYQEARKILIAEYSHINYYEWLPIVVVTHWMDASLVYGSDDELAAKLREFNG--GRLAVEF--R-DGR  125 (152)
Q Consensus        52 ~~~~p~w~de-~lf~~aR~i~~a~~q~I~~~e~lP~lLgt~~iD~sl~ygss~~~a~~lR~f~~--G~L~~~~--~-~g~  125 (152)
                      +..+|.++.. +|+...|...........++|++..+  |+|+|+|.+||++++.+..||+|.+  |+|++..  . +|.
T Consensus        19 p~~Dp~~~~~~~cl~f~Rs~~~~~~g~~~~req~N~~--T~~lD~S~vYGs~~~~~~~LR~~~~~~G~Lk~~~~~~~~g~   96 (466)
T 1d2v_C           19 PPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINAL--TSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGR   96 (466)
T ss_dssp             CTTCSSCCCTTCEECCBCCCBSSTTCSSSCCCBEECS--CSSSSCHHHHCSSHHHHHHHBCCSSSSCCBCCCSSCCBTTB
T ss_pred             CCCCCCcCCCCcceeeecCccccCCCCCCHHHHhhcc--ccccccccCcCCCHHHHHHHhccCCCCCeeccCCccCCCCC
Confidence            3455655443 46677776544333345689999876  9999999999999999999999987  9999853  2 688


Q ss_pred             CCCCCCCCCCCCCCC--CCCCCCcccCCC
Q psy8808         126 PWPPAAANKSAVCDS--KNDALPCYQFGK  152 (152)
Q Consensus       126 ~~lP~~~~~~~~C~~--~~~~~~CF~aGd  152 (152)
                      .|||.....++.|..  ...+..||.|||
T Consensus        97 ~~lP~~~~~~~~c~~~~~~~~~~cf~~GD  125 (466)
T 1d2v_C           97 ALLPFDNLHDDPCLLTNRSARIPCFLAGD  125 (466)
T ss_dssp             CCCCBCCCTTCSGGGGCTTTCCCCBCCSS
T ss_pred             cCCCCCCCCCCcccccccCCCcchhcccC
Confidence            999998776677853  233578999998

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=98.48  E-value=1.3e-08  Score=89.77  Aligned_cols=63  Identities=22%  Similarity=0.364  Sum_probs=51.6

Q ss_pred             hccccccccCCCCHHHHHhhcccCCCeEEEEcCCCCCCCCCCCCCCCCCCCCC--CCCCcccCCC
Q psy8808          90 THWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKN--DALPCYQFGK  152 (152)
Q Consensus        90 t~~iD~sl~ygss~~~a~~lR~f~~G~L~~~~~~g~~~lP~~~~~~~~C~~~~--~~~~CF~aGd  152 (152)
                      ++|+|+|.+||++++.+.+||+|.+|+|++...+|..|||...+....|...+  ....||.|||
T Consensus       194 t~~lD~S~IYGss~~~~~~LR~~~~G~Lk~~~~~g~~~pP~~~~~~~~~~~~~~~~~~~cf~~GD  258 (587)
T 3nt1_A          194 GHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQ  258 (587)
T ss_dssp             TCSCCCHHHHCSSHHHHHHHBCSSTTCBCCEEETTEEECCBHHHHCCCCCCCTTSCGGGCBCCSS
T ss_pred             cceeeeccCCCCCHHHHHhccCCCCCeeeeecCCCccCCCCCCCcccccccCCCCCcccccccCC
Confidence            78999999999999999999999999999987789999998654333453322  2457999998

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=98.37  E-value=1e-07  Score=83.62  Aligned_cols=63  Identities=22%  Similarity=0.404  Sum_probs=49.7

Q ss_pred             hccccccccCCCCHHHHHhhcccCCCeEEEEcCCCCCCCCCCCCCCCCCCC--CCCCCCcccCCC
Q psy8808          90 THWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDS--KNDALPCYQFGK  152 (152)
Q Consensus        90 t~~iD~sl~ygss~~~a~~lR~f~~G~L~~~~~~g~~~lP~~~~~~~~C~~--~~~~~~CF~aGd  152 (152)
                      |+|+|+|.+||++++.+..||+|.+|+|++...+|..|||........|..  ......||.|||
T Consensus       194 T~~lD~S~vYGs~~~~~~~LR~~~~G~Lk~~~~~g~~~~P~~~~~~~~~~~~~~~~~~~cf~~GD  258 (553)
T 1q4g_A          194 GHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQ  258 (553)
T ss_dssp             TCSSSCHHHHCSSHHHHHHHBCSSTTCBCCEEETTEEECCBTTTSCCCCCCCTTCCGGGSBCCSS
T ss_pred             cccccccccCCCCHHHHHhhhcCCCCEecccCCCCccCCCccCCCCCcccCCCCCCchhccccCc
Confidence            899999999999999999999999999998766788899976543222211  112457999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
g1cxp.1	570	a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapi	2e-18
g1cxp.1	570	a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapi	8e-07
d1q4ga1	511	a.93.1.2 (A:74-584) Prostaglandin H2 synthase {She	6e-18
d1q4ga1	511	a.93.1.2 (A:74-584) Prostaglandin H2 synthase {She	2e-12
d1cvua1	511	a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mou	6e-17
d1cvua1	511	a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mou	2e-12

>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Length = 511

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 76.9 bits (189), Expect = 6e-18
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 30  NPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVV 89
            PG      +   +HNR+  +L   +P W DE L+Q AR ILI E   I   E++  +  
Sbjct: 222 LPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSG 281

Query: 90  THWM---DASLVYGSD 102
                  D  L++G+ 
Sbjct: 282 YFLQLKFDPELLFGAQ 297

>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Length = 511

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 61.5 bits (149), Expect = 2e-12
 Identities = 15/63 (23%), Positives = 26/63 (41%)

Query: 89  VTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKNDALPCY 148
           + H +D   +YG + E   +LR F  G+L  +  +G  +PP+      +        P  
Sbjct: 151 LGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQS 210

Query: 149 QFG 151
           Q  
Sbjct: 211 QMA 213

>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Length = 511

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 74.2 bits (182), Expect = 6e-17
 Identities = 18/71 (25%), Positives = 31/71 (43%)

Query: 24  DIDQGCNPGYTPAEQMIQVKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEW 83
               G  PG      +   +H R+  +L   +P W DE L+Q ++ ILI E   I   ++
Sbjct: 217 QEVFGLVPGLMMYATIWLREHQRVCDILKQEHPEWGDEQLFQTSKLILIGETIKIVIEDY 276

Query: 84  LPIVVVTHWMD 94
           +  +   H+  
Sbjct: 277 VQHLSGYHFKL 287

>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Length = 511

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.5 bits (149), Expect = 2e-12
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 89  VTHWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKNDALPCY 148
           + H +D + +YG   +   KLR F  G+L  +   G  +PP   +               
Sbjct: 152 LGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENL 211

Query: 149 QF 150
           QF
Sbjct: 212 QF 213

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
g1cxp.1	570	Myeloperoxidase {Human (Homo sapiens) [TaxId: 9606	99.95
d1q4ga1	511	Prostaglandin H2 synthase {Sheep (Ovis aries) [Tax	99.78
d1cvua1	511	Prostaglandin H2 synthase {Mouse (Mus musculus) [T	99.78
g1cxp.1	570	Myeloperoxidase {Human (Homo sapiens) [TaxId: 9606	98.53
d1cvua1	511	Prostaglandin H2 synthase {Mouse (Mus musculus) [T	98.44
d1q4ga1	511	Prostaglandin H2 synthase {Sheep (Ovis aries) [Tax	98.43

>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.78  E-value=4.8e-20  Score=158.42  Aligned_cols=52  Identities=35%  Similarity=0.506  Sum_probs=50.8

Q ss_pred             hHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHhhcccccccchhhhhhhccc
Q psy8808          42 VKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWM   93 (152)
Q Consensus        42 r~HN~~a~~l~~~~p~w~de~lf~~aR~i~~a~~q~I~~~e~lP~lLgt~~i   93 (152)
                      |||||||++|+++||+|+||+|||+||+||||++|||+|+||||.|+|..+.
T Consensus       234 REHNriad~L~~~nP~W~DE~LFQ~AR~Ivia~~q~I~~~EyLp~llG~~~~  285 (511)
T d1q4ga1         234 REHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQ  285 (511)
T ss_dssp             HHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCSSC
T ss_pred             HhccHHHHHHHhhCCCCCHHHHHHHHHHHHHHHeeeeeHHhhHHHhcCcccc
Confidence            9999999999999999999999999999999999999999999999998765

>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=2.7e-20  Score=159.93  Aligned_cols=52  Identities=29%  Similarity=0.547  Sum_probs=51.0

Q ss_pred             hHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHhhcccccccchhhhhhhccc
Q psy8808          42 VKHNRIATVLGHLNPHWDDETLYQEARKILIAEYSHINYYEWLPIVVVTHWM   93 (152)
Q Consensus        42 r~HN~~a~~l~~~~p~w~de~lf~~aR~i~~a~~q~I~~~e~lP~lLgt~~i   93 (152)
                      |||||||++|++.||+|+||+|||+||+||||++|||+|+||||.|+|.++.
T Consensus       235 REHNriad~L~~~nP~W~DE~LFQ~AR~Ivia~~q~I~y~EyLp~llG~~~~  286 (511)
T d1cvua1         235 REHQRVCDILKQEHPEWGDEQLFQTSKLILIGETIKIVIEDYVQHLSGYHFK  286 (511)
T ss_dssp             HHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTCSSC
T ss_pred             HhhhHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHHhhCcccc
Confidence            9999999999999999999999999999999999999999999999998875

>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.44  E-value=9.1e-09  Score=87.47  Aligned_cols=63  Identities=22%  Similarity=0.361  Sum_probs=52.9

Q ss_pred             hccccccccCCCCHHHHHhhcccCCCeEEEEcCCCCCCCCCCCCCCCCCCC--CCCCCCcccCCC
Q psy8808          90 THWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDS--KNDALPCYQFGK  152 (152)
Q Consensus        90 t~~iD~sl~ygss~~~a~~lR~f~~G~L~~~~~~g~~~lP~~~~~~~~C~~--~~~~~~CF~aGd  152 (152)
                      ++|+|+|.+||++++.+..||+|.+|+|++...+|.+|||...+....|..  ...+..||.+||
T Consensus       153 ts~lD~S~iYGss~~~~~~LRtf~~GkLk~~~~~g~~~pP~~~~~~~~~~~~~~~~~~~~f~~Gd  217 (511)
T d1cvua1         153 GHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQ  217 (511)
T ss_dssp             TCSCCCHHHHCSSHHHHHHHBCSSTTCBCCEEETTEEECCBHHHHCCCCCCCTTSCGGGCBCCSS
T ss_pred             cchhhcccccCCCHHHHHhccCCCCCEeccCCCCcccCCCCCCCCcccccCCCCCchhhhhhcCC
Confidence            899999999999999999999999999999877899999986555444532  224568999998

>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Myeloperoxidase-like
domain: Prostaglandin H2 synthase
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.43  E-value=2.7e-08  Score=84.47  Aligned_cols=63  Identities=22%  Similarity=0.423  Sum_probs=52.4

Q ss_pred             hccccccccCCCCHHHHHhhcccCCCeEEEEcCCCCCCCCCCCCCCCCCCCCC--CCCCcccCCC
Q psy8808          90 THWMDASLVYGSDDELAAKLREFNGGRLAVEFRDGRPWPPAAANKSAVCDSKN--DALPCYQFGK  152 (152)
Q Consensus        90 t~~iD~sl~ygss~~~a~~lR~f~~G~L~~~~~~g~~~lP~~~~~~~~C~~~~--~~~~CF~aGd  152 (152)
                      ++|+|+|.+||++++.+..||+|++|+|++...+|..|||........|....  ....||.|||
T Consensus       152 t~~lD~S~IYGss~~~~~~LRtf~~GkLk~~~~~g~~~pP~~~~~~~~~~~~~~~~~~~~f~aGd  216 (511)
T d1q4ga1         152 GHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQ  216 (511)
T ss_dssp             TCSSSCHHHHCSSHHHHHHHBCSSTTCBCCEEETTEEECCBTTTSCCCCCCCTTCCGGGSBCCSS
T ss_pred             cccccccccCCCCHHHHHhccCCCCCEecccCCCCCcCCCCCCcccccccCCCCCChhhhhhcCc
Confidence            78999999999999999999999999999877788899998766555453322  3467999998