Psyllid ID: psy885

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Protein Sequence
MSGVFSVKKYSNSNPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIFF
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHccccccccccHHHHHHHccccEEEccccccccEEEEEcccccccccccccEEEEccccHHHHHHccccccccEEEEccHHHHHHHHHHHHHHcccccccEEcccccccccccccccccccccccccEEHHHHcccccccHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHcccccccccccccEEcHHHccccHHHHHHHcccccEEEccccccHHHHHHHHHHcccEEEccccccHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEcccccHHHHHHHHHHHHccccHHHHHHHcccEEEEEcccccccEEEEEEcccccccccccEEEEEEcccHHHHHHccEEEEcccEEcccHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccHHcccHcccEEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccccccccccEEEEccHcHHcccHHHHHHHHHccEEEEEccHHHHHHHHHHHHHcccEEEEcccccccHHHHcc
Coil and Loop (DISEMBL)
msgvfsvkkysnsnppnhcvsfsgRREQAIAVRQDVETKWKKEFTLEFsrdrksmssyctplkssklgssgpklfvkgapegvlerctharigsqkvslkdfsantrfenlrslepkskvsaivpwgmkpedmnladstkfASYEVNLTFVGVvgmldpprkevFDSIARCRAAGIRVIVITGDNKATAEAICRRIgvfteeedttgksysgrefddlplSEQKAAVARARLFsrvepahkSKIVEFLQGMNEIsamdsstgktelriff
Flexible Loop (DISEMBL)
msgvfsvkkysnsnppnhcvsfsGRREQAIAVRQDVETKWKKeftlefsrdrksmssyctplkssklgssgpkLFVKGAPEGVLERCTHarigsqkvslkdfSANTRfenlrslepkskvsaivpwgmkPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVivitgdnkatAEAICRrigvfteeedttgksysgrefddlpLSEQKAAVARARLfsrvepahkskIVEFLQGMNeisamdsstgktelriff
Low Complexity Region (SEG)
MSGVFSVKKYSNSNPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTplkssklgssgpklFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIFF
Disordered region (IsUnstruct)
*****************************IAVRQDVETKWKKEFTL****************************FVKGAPEGVLERCTHARIG***************************SAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT*******************************************IVEFL**********************
Disordered Region (DISOPRED)
*SGVFSVKKYSNSNPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMN*AD*TKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIFF
Disordered Region (DISEMBL)
MSGVFSVKKYSNSNPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIFF
Disordered Region (DISPRO)
**GVFSVKKYSNSNPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIFF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGVFSVKKYSNSNPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIFF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	270	2.2.26 [Sep-21-2011]
Q292Q0	1002	Calcium-transporting ATPa	yes	N/A	0.840	0.226	0.744	3e-99
Q7PPA5	1018	Calcium-transporting ATPa	yes	N/A	0.881	0.233	0.728	2e-97
P22700	1020	Calcium-transporting ATPa	yes	N/A	0.840	0.222	0.744	2e-97
P35316	1003	Calcium-transporting ATPa	N/A	N/A	0.9	0.242	0.638	2e-83
P13585	994	Sarcoplasmic/endoplasmic	yes	N/A	0.811	0.220	0.549	3e-69
P70083	996	Sarcoplasmic/endoplasmic	N/A	N/A	0.822	0.222	0.563	7e-69
Q8R429	994	Sarcoplasmic/endoplasmic	yes	N/A	0.833	0.226	0.568	2e-67
Q92105	994	Sarcoplasmic/endoplasmic	N/A	N/A	0.840	0.228	0.551	6e-67
Q64578	994	Sarcoplasmic/endoplasmic	yes	N/A	0.833	0.226	0.564	7e-67
Q9YGL9	1042	Sarcoplasmic/endoplasmic	yes	N/A	0.825	0.214	0.555	1e-66

>sp|Q292Q0|ATC1_DROPS Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila pseudoobscura pseudoobscura GN=Ca-P60A PE=3 SV=2

 Score =  361 bits (927), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 181/243 (74%), Positives = 202/243 (83%), Gaps = 16/243 (6%)

Query: 25  RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 84
           RR  AIA R ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+S+LG+ GPKLFVKGAPEGVL
Sbjct: 464 RRSNAIAARGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGT-GPKLFVKGAPEGVL 522

Query: 85  ERCTHARIGSQKVSL------KDFSANTRF----ENLRSLEPKSKVSAIVPWGMKPEDMN 134
           +RCTHAR+G+ KV L      K  +   ++    + LR L       A+    ++PEDM+
Sbjct: 523 DRCTHARVGTSKVPLTSALKAKILALTGQYGTGRDTLRCL-----ALAVADSPIRPEDMD 577

Query: 135 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR 194
           L DSTKF  YEVNLTFVGVVGMLDPPRKEVFD+I RCRAAGIRVIVITGDNKATAEAICR
Sbjct: 578 LGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDAIVRCRAAGIRVIVITGDNKATAEAICR 637

Query: 195 RIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEI 254
           RIGVFTEEEDTTGKSYSGREFDDL ++EQKAAVAR+RLFSRVEP HKSKIVE+LQGMNEI
Sbjct: 638 RIGVFTEEEDTTGKSYSGREFDDLSIAEQKAAVARSRLFSRVEPQHKSKIVEYLQGMNEI 697

Query: 255 SAM 257
           SAM
Sbjct: 698 SAM 700

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
Drosophila pseudoobscura pseudoobscura (taxid: 46245)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8

>sp|Q7PPA5|ATC1_ANOGA Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Anopheles gambiae GN=Ca-P60A PE=2 SV=5

 Score =  355 bits (911), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 185/254 (72%), Positives = 200/254 (78%), Gaps = 16/254 (6%)

Query: 14  NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK 73
           NP N       RR  AI VRQ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+SKLG+ GPK
Sbjct: 452 NPFNVAKQGLDRRSSAICVRQEIETKWKKEFTLEFSRDRKSMSSYCTPLKASKLGN-GPK 510

Query: 74  LFVKGAPEGVLERCTHARIGSQKVSLKDF----------SANTRFENLRSLEPKSKVSAI 123
           LF KGAPEGVLERCTHAR+GS KV L             +  T  + LR L   +  S  
Sbjct: 511 LFCKGAPEGVLERCTHARVGSTKVPLTQTLKQRILDLTRTYGTGRDTLRCLALATADSP- 569

Query: 124 VPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITG 183
               MKP+DM+L DSTKF +YEVNLTFVGVVGMLDPPRKEV DSI RCRAAGIRVIVITG
Sbjct: 570 ----MKPDDMDLNDSTKFYTYEVNLTFVGVVGMLDPPRKEVQDSIVRCRAAGIRVIVITG 625

Query: 184 DNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSK 243
           DNKATAEAICRRIGVF E+EDTTGKSYSGREFDDL +SEQ+ A +RARLFSRVEPAHKSK
Sbjct: 626 DNKATAEAICRRIGVFGEDEDTTGKSYSGREFDDLSVSEQREACSRARLFSRVEPAHKSK 685

Query: 244 IVEFLQGMNEISAM 257
           IVEFLQ MNEISAM
Sbjct: 686 IVEFLQSMNEISAM 699

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.

Anopheles gambiae (taxid: 7165)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|P22700|ATC1_DROME Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila melanogaster GN=Ca-P60A PE=1 SV=2

 Score =  355 bits (911), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 181/243 (74%), Positives = 199/243 (81%), Gaps = 16/243 (6%)

Query: 25  RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 84
           RR  AIA R ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+S+LG+ GPKLFVKGAPEGVL
Sbjct: 464 RRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGT-GPKLFVKGAPEGVL 522

Query: 85  ERCTHARIGSQKVSL------KDFSANTRF----ENLRSLEPKSKVSAIVPWGMKPEDMN 134
           ERCTHAR+G+ KV L      K  +   ++    + LR L       A+    MKP++M+
Sbjct: 523 ERCTHARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCL-----ALAVADSPMKPDEMD 577

Query: 135 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR 194
           L DSTKF  YEVNLTFVGVVGMLDPPRKEVFDSI RCRAAGIRVIVITGDNKATAEAICR
Sbjct: 578 LGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICR 637

Query: 195 RIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEI 254
           RIGVF E+EDTTGKSYSGREFDDL  +EQKAAVAR+RLFSRVEP HKSKIVEFLQ MNEI
Sbjct: 638 RIGVFAEDEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEI 697

Query: 255 SAM 257
           SAM
Sbjct: 698 SAM 700

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|P35316|ATC_ARTSF Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Artemia franciscana PE=2 SV=1

 Score =  308 bits (789), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 159/249 (63%), Positives = 190/249 (76%), Gaps = 6/249 (2%)

Query: 14  NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK 73
           NP N   +   RR  A+ VR+D++T+WKKEFTLEFSRDRKSMSSYC PLK+  L S+GPK
Sbjct: 457 NPYNLSKAGKDRRSAALVVREDMDTRWKKEFTLEFSRDRKSMSSYCVPLKAGLL-SNGPK 515

Query: 74  LFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSL-----EPKSKVSAIVPWGM 128
           +FVKGAPEGVL+RCTH R+G++KV +     +   E  R+        +    A +   M
Sbjct: 516 MFVKGAPEGVLDRCTHVRVGTKKVPMTPAIMDKILEVTRAYGTGRDTLRCLALATIDDPM 575

Query: 129 KPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKAT 188
            P+DM++ DSTKF  YE N TFVGVVGMLDPPRKEV D+I RCRAAGIRVIVITGDNKAT
Sbjct: 576 DPKDMDIIDSTKFVKYEQNCTFVGVVGMLDPPRKEVLDAIERCRAAGIRVIVITGDNKAT 635

Query: 189 AEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFL 248
           AEAICRRIGVF E+E+T G +Y+GREFDDL +  Q+ AVAR+RLF+RVEP HKSKIVE+L
Sbjct: 636 AEAICRRIGVFGEDENTEGMAYTGREFDDLSVEGQRDAVARSRLFARVEPFHKSKIVEYL 695

Query: 249 QGMNEISAM 257
           QGM EISAM
Sbjct: 696 QGMGEISAM 704

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium.

Artemia franciscana (taxid: 6661)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|P13585|AT2A1_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Gallus gallus GN=ATP2A1 PE=2 SV=2

 Score =  261 bits (668), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 138/251 (54%), Positives = 171/251 (68%), Gaps = 32/251 (12%)

Query: 25  RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 84
           + E+A A    ++   KKEFTLEFSRDRKSMS YC+P K+S+  + G K+FVKGAPEGV+
Sbjct: 464 KVERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCSPAKASR-AAVGNKMFVKGAPEGVI 522

Query: 85  ERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIV-PWGM--------------- 128
           +RC + R+G+ +V L             +   K K+ A++  WG                
Sbjct: 523 DRCNYVRVGTTRVPL-------------TPAVKEKILAVIKEWGTGRDTLRCLALATRDT 569

Query: 129 --KPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 186
             K EDM L DSTKFA YE +LTFVG VGMLDPPRKEV  SI  CR AGIRVI+ITGDNK
Sbjct: 570 PPKMEDMMLVDSTKFAEYETDLTFVGCVGMLDPPRKEVMGSIRLCRDAGIRVIMITGDNK 629

Query: 187 ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE 246
            TA AICRRIG+FTE+E+ +G++Y+GREFDDLP +EQ+ A  RA  F+RVEP HKSKIVE
Sbjct: 630 GTAIAICRRIGIFTEDEEVSGRAYTGREFDDLPPAEQREACRRACCFARVEPTHKSKIVE 689

Query: 247 FLQGMNEISAM 257
           FLQ  +EI+AM
Sbjct: 690 FLQSFDEITAM 700

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|P70083|AT2A1_MAKNI Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Makaira nigricans GN=atp2a1 PE=2 SV=2

 Score =  260 bits (665), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 138/245 (56%), Positives = 170/245 (69%), Gaps = 23/245 (9%)

Query: 25  RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 84
           R E+A A    ++   KK FTLEFSRDRKSMS YCTP K    G  G K+FVKGAPEGV+
Sbjct: 464 RIERANACCTVIKQLMKKNFTLEFSRDRKSMSVYCTPAK----GDGGAKMFVKGAPEGVI 519

Query: 85  ERCTHARIGSQKVSL------------KDFSANTRFENLRSLEPKSKVSAIVPWGMKPED 132
           +RC + R+G+ +V L            +D+   T  + LR L   ++ +      +K E+
Sbjct: 520 DRCAYVRVGTTRVPLTSAIKEKIMAVIRDWG--TGRDTLRCLALATRDTP-----LKVEE 572

Query: 133 MNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI 192
           MNL DSTKFA YE ++TFVG VGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AI
Sbjct: 573 MNLEDSTKFADYETDMTFVGCVGMLDPPRKEVTGSIELCRDAGIRVIMITGDNKGTAIAI 632

Query: 193 CRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMN 252
           CRRIG+F E+ED + K+Y+GREFDDLP  +Q  AV RA  F+RVEP+HKSKIVEFLQG +
Sbjct: 633 CRRIGIFKEDEDVSNKAYTGREFDDLPSQDQAEAVRRACCFARVEPSHKSKIVEFLQGND 692

Query: 253 EISAM 257
           +I+AM
Sbjct: 693 DITAM 697

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction.

Makaira nigricans (taxid: 13604)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q8R429|AT2A1_MOUSE Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus GN=Atp2a1 PE=2 SV=1

 Score =  255 bits (652), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 137/241 (56%), Positives = 170/241 (70%), Gaps = 16/241 (6%)

Query: 27  EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 86
           E+A A    +    KKEFTLEFSRDRKSMS YC+P KSS+  + G K+FVKGAPEGV++R
Sbjct: 466 ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR-AAVGNKMFVKGAPEGVIDR 524

Query: 87  CTHARIGSQKVSL------KDFSA----NTRFENLRSLEPKSKVSAIVPWGMKPEDMNLA 136
           C + R+G+ +V L      K  S      T  + LR L   ++ +       K E+M L 
Sbjct: 525 CNYVRVGTTRVPLTGPVKEKIMSVIKEWGTGRDTLRCLALATRDTP-----PKREEMVLD 579

Query: 137 DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 196
           DS KF  YE++LTFVGVVGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICRRI
Sbjct: 580 DSAKFMEYEMDLTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRI 639

Query: 197 GVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISA 256
           G+F+E E+ T ++Y+GREFDDLPL+EQ+ A  RA  F+RVEP+HKSKIVE+LQ  +EI+A
Sbjct: 640 GIFSENEEVTDRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITA 699

Query: 257 M 257
           M
Sbjct: 700 M 700

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q92105|AT2A1_RANES Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rana esculenta GN=ATP2A1 PE=2 SV=1

 Score =  254 bits (648), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 134/243 (55%), Positives = 170/243 (69%), Gaps = 16/243 (6%)

Query: 25  RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 84
           + E+A A    ++   KKEFTLEFSRDRKSMS YC P K+S+  + G K+FVKGAPEGV+
Sbjct: 464 KVERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCIPAKASR-AAVGNKMFVKGAPEGVI 522

Query: 85  ERCTHARIGSQKVSL------KDFSA----NTRFENLRSLEPKSKVSAIVPWGMKPEDMN 134
           +RC + R+G+ +V L      K  S      T  + LR L   ++ +       K EDM 
Sbjct: 523 DRCNYVRVGTTRVPLTSAIKDKILSVVKEWGTGRDTLRCLALATRDTP-----PKREDMV 577

Query: 135 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR 194
           L ++T+F  YE +LTFVG VGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICR
Sbjct: 578 LDEATRFIEYETDLTFVGCVGMLDPPRKEVMGSIQLCREAGIRVIMITGDNKGTAIAICR 637

Query: 195 RIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEI 254
           RIG+F E++D +G++++GREFDDLP +EQ+ A  RA  F+RVEPAHKSKIVEFLQ  +EI
Sbjct: 638 RIGIFGEDDDVSGRAFTGREFDDLPPAEQREACKRASCFARVEPAHKSKIVEFLQSFDEI 697

Query: 255 SAM 257
           +AM
Sbjct: 698 TAM 700

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction.

Rana esculenta (taxid: 8401)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q64578|AT2A1_RAT Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus GN=Atp2a1 PE=2 SV=1

 Score =  253 bits (647), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 136/241 (56%), Positives = 169/241 (70%), Gaps = 16/241 (6%)

Query: 27  EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 86
           E+A A    +    KKEFTLEFSRDRKSMS YC+P KSS+  + G K+FVKGAPEGV++R
Sbjct: 466 ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR-AAVGNKMFVKGAPEGVIDR 524

Query: 87  CTHARIGSQKVSL------KDFSA----NTRFENLRSLEPKSKVSAIVPWGMKPEDMNLA 136
           C + R+G+ +V L      K  S      T  + LR L   ++ +       K E+M L 
Sbjct: 525 CNYVRVGTTRVPLTGPVKEKIMSVIKEWGTGRDTLRCLALATRDTP-----PKREEMVLD 579

Query: 137 DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 196
           DS KF  YE++LTFVGVVGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICRRI
Sbjct: 580 DSAKFMEYEMDLTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRI 639

Query: 197 GVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISA 256
           G+F+E E+   ++Y+GREFDDLPL+EQ+ A  RA  F+RVEP+HKSKIVE+LQ  +EI+A
Sbjct: 640 GIFSENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITA 699

Query: 257 M 257
           M
Sbjct: 700 M 700

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q9YGL9|AT2A3_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus gallus GN=ATP2A3 PE=2 SV=1

 Score =  253 bits (646), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 135/243 (55%), Positives = 161/243 (66%), Gaps = 20/243 (8%)

Query: 27  EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 86
           E+A A    ++   +KE TLEFSRDRKSMS YCTP       S+G K+FVKGAPE V+ER
Sbjct: 466 ERANACNSVIKHLMRKECTLEFSRDRKSMSVYCTPTGPGH-NSAGSKMFVKGAPESVIER 524

Query: 87  CTHARIGSQKVSL------------KDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMN 134
           CTH R+G+ KV L            +D+   T  + LR L   +  + +     + E M 
Sbjct: 525 CTHVRVGTAKVPLTPPVREKILSQIRDWGMGT--DTLRCLALATHDAPV-----QRETMQ 577

Query: 135 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR 194
           L DST F  YE NLTFVG VGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICR
Sbjct: 578 LHDSTTFTHYETNLTFVGCVGMLDPPRKEVTSSIEMCRKAGIRVIMITGDNKGTAVAICR 637

Query: 195 RIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEI 254
           RIG+FTE ED  GK+Y+GREFD+L    Q+ A   AR F+RVEPAHKS+IVE+LQ  NEI
Sbjct: 638 RIGIFTESEDVAGKAYTGREFDELSPEAQRQACREARCFARVEPAHKSRIVEYLQSFNEI 697

Query: 255 SAM 257
           +AM
Sbjct: 698 TAM 700

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Transports calcium ions from the cytosol into the sarcoplasmic/endoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
328718401	1005	PREDICTED: calcium-transporting ATPase s	0.892	0.239	0.745	1e-98
157113753	999	calcium-transporting atpase sarcoplasmic	0.892	0.241	0.745	1e-98
157113755	1019	calcium-transporting atpase sarcoplasmic	0.892	0.236	0.745	1e-98
157113751	998	calcium-transporting atpase sarcoplasmic	0.892	0.241	0.745	1e-98
4191598	1000	sarco(endo)plasmic reticulum-type calciu	0.892	0.241	0.737	5e-98
328785449	1018	PREDICTED: calcium-transporting ATPase s	0.851	0.225	0.770	5e-98
350403500	1002	PREDICTED: calcium-transporting ATPase s	0.885	0.238	0.754	5e-98
380022760	1018	PREDICTED: LOW QUALITY PROTEIN: calcium-	0.851	0.225	0.770	6e-98
357615523	1025	sarco/endoplasmic reticulum calcium ATPa	0.892	0.235	0.741	6e-98
332020025	981	Calcium-transporting ATPase sarcoplasmic	0.851	0.234	0.766	1e-97

>gi|328718401|ref|XP_001943129.2| PREDICTED: calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type-like isoform 1 [Acyrthosiphon pisum] gi|328718403|ref|XP_003246477.1| PREDICTED: calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type-like isoform 2 [Acyrthosiphon pisum]

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 187/251 (74%), Positives = 204/251 (81%), Gaps = 10/251 (3%)

Query: 14  NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK 73
           NP N   S   RR  AI V+QD+ETKWKKEFTLEFSRDRKSMSSYCTP+K +KLG+ GPK
Sbjct: 456 NPNNVSKSGLDRRTTAIVVKQDIETKWKKEFTLEFSRDRKSMSSYCTPIKPTKLGN-GPK 514

Query: 74  LFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLR-------SLEPKSKVSAIVPW 126
           LFVKGAPEGVLERCTHAR+GSQKV L     N   E  R       +L   +  ++  P 
Sbjct: 515 LFVKGAPEGVLERCTHARVGSQKVPLTSALKNRILELTRKYGTGRDTLRCLALATSDSP- 573

Query: 127 GMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 186
             KPE M+L DS KF +YEVNLTFVGVVGMLDPPRKEVFDSI RCRAAGIRVIVITGDNK
Sbjct: 574 -TKPEQMDLNDSNKFHTYEVNLTFVGVVGMLDPPRKEVFDSIQRCRAAGIRVIVITGDNK 632

Query: 187 ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE 246
           ATAEAICRRIGVFTEEEDTTGKSYSGREFDDL LSEQK+AVA+ARLFSRVEP+HKSKI+E
Sbjct: 633 ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLSLSEQKSAVAKARLFSRVEPSHKSKIIE 692

Query: 247 FLQGMNEISAM 257
           +LQ MNEISAM
Sbjct: 693 YLQSMNEISAM 703

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157113753|ref|XP_001652085.1| calcium-transporting atpase sarcoplasmic/endoplasmic reticulum type (calcium pump) [Aedes aegypti] gi|108877603|gb|EAT41828.1| AAEL006582-PB [Aedes aegypti]

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 187/251 (74%), Positives = 204/251 (81%), Gaps = 10/251 (3%)

Query: 14  NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK 73
           NP N       RR  AI VRQ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+SKLG+ GPK
Sbjct: 452 NPFNVTKQGLDRRSAAICVRQEIETKWKKEFTLEFSRDRKSMSSYCTPLKASKLGT-GPK 510

Query: 74  LFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLR-------SLEPKSKVSAIVPW 126
           LF KGAPEGVL+RCTHAR+GS KV L     N   +  R       +L   +  +A  P 
Sbjct: 511 LFCKGAPEGVLDRCTHARVGSTKVPLTQTLKNRILDLTRQYGTGRDTLRCLALATADNP- 569

Query: 127 GMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 186
            MKP+DM+L DSTKF +YEVNLTFVGVVGMLDPPRKEV DSIARCRAAGIRVIVITGDNK
Sbjct: 570 -MKPDDMDLNDSTKFYTYEVNLTFVGVVGMLDPPRKEVLDSIARCRAAGIRVIVITGDNK 628

Query: 187 ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE 246
           ATAEAICRRIGVFTE+EDTTGKSYSGREFDDLP+SEQ+ A ARARLFSRVEPAHKSKIVE
Sbjct: 629 ATAEAICRRIGVFTEDEDTTGKSYSGREFDDLPVSEQREACARARLFSRVEPAHKSKIVE 688

Query: 247 FLQGMNEISAM 257
           +LQ MNEISAM
Sbjct: 689 YLQSMNEISAM 699

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157113755|ref|XP_001652086.1| calcium-transporting atpase sarcoplasmic/endoplasmic reticulum type (calcium pump) [Aedes aegypti] gi|108877604|gb|EAT41829.1| AAEL006582-PC [Aedes aegypti]

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 187/251 (74%), Positives = 204/251 (81%), Gaps = 10/251 (3%)

Query: 14  NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK 73
           NP N       RR  AI VRQ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+SKLG+ GPK
Sbjct: 452 NPFNVTKQGLDRRSAAICVRQEIETKWKKEFTLEFSRDRKSMSSYCTPLKASKLGT-GPK 510

Query: 74  LFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLR-------SLEPKSKVSAIVPW 126
           LF KGAPEGVL+RCTHAR+GS KV L     N   +  R       +L   +  +A  P 
Sbjct: 511 LFCKGAPEGVLDRCTHARVGSTKVPLTQTLKNRILDLTRQYGTGRDTLRCLALATADNP- 569

Query: 127 GMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 186
            MKP+DM+L DSTKF +YEVNLTFVGVVGMLDPPRKEV DSIARCRAAGIRVIVITGDNK
Sbjct: 570 -MKPDDMDLNDSTKFYTYEVNLTFVGVVGMLDPPRKEVLDSIARCRAAGIRVIVITGDNK 628

Query: 187 ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE 246
           ATAEAICRRIGVFTE+EDTTGKSYSGREFDDLP+SEQ+ A ARARLFSRVEPAHKSKIVE
Sbjct: 629 ATAEAICRRIGVFTEDEDTTGKSYSGREFDDLPVSEQREACARARLFSRVEPAHKSKIVE 688

Query: 247 FLQGMNEISAM 257
           +LQ MNEISAM
Sbjct: 689 YLQSMNEISAM 699

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157113751|ref|XP_001652084.1| calcium-transporting atpase sarcoplasmic/endoplasmic reticulum type (calcium pump) [Aedes aegypti] gi|108877602|gb|EAT41827.1| AAEL006582-PA [Aedes aegypti]

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 187/251 (74%), Positives = 204/251 (81%), Gaps = 10/251 (3%)

Query: 14  NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK 73
           NP N       RR  AI VRQ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+SKLG+ GPK
Sbjct: 452 NPFNVTKQGLDRRSAAICVRQEIETKWKKEFTLEFSRDRKSMSSYCTPLKASKLGT-GPK 510

Query: 74  LFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLR-------SLEPKSKVSAIVPW 126
           LF KGAPEGVL+RCTHAR+GS KV L     N   +  R       +L   +  +A  P 
Sbjct: 511 LFCKGAPEGVLDRCTHARVGSTKVPLTQTLKNRILDLTRQYGTGRDTLRCLALATADNP- 569

Query: 127 GMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 186
            MKP+DM+L DSTKF +YEVNLTFVGVVGMLDPPRKEV DSIARCRAAGIRVIVITGDNK
Sbjct: 570 -MKPDDMDLNDSTKFYTYEVNLTFVGVVGMLDPPRKEVLDSIARCRAAGIRVIVITGDNK 628

Query: 187 ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE 246
           ATAEAICRRIGVFTE+EDTTGKSYSGREFDDLP+SEQ+ A ARARLFSRVEPAHKSKIVE
Sbjct: 629 ATAEAICRRIGVFTEDEDTTGKSYSGREFDDLPVSEQREACARARLFSRVEPAHKSKIVE 688

Query: 247 FLQGMNEISAM 257
           +LQ MNEISAM
Sbjct: 689 YLQSMNEISAM 699

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|4191598|gb|AAD09820.1| sarco(endo)plasmic reticulum-type calcium ATPase [Heliothis virescens]

 Score =  363 bits (931), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 185/251 (73%), Positives = 206/251 (82%), Gaps = 10/251 (3%)

Query: 14  NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK 73
           NP N   +   RR  AI VRQ++ETKWKKEFTLEFSRDRKSMS+YCTPLK S+LG+ GPK
Sbjct: 453 NPFNVPKTGLDRRSCAIVVRQEIETKWKKEFTLEFSRDRKSMSTYCTPLKPSRLGN-GPK 511

Query: 74  LFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLR-------SLEPKSKVSAIVPW 126
           LFVKGAPEGVLERCTHAR+G+ KV L     N   +  R       +L   +  +A  P 
Sbjct: 512 LFVKGAPEGVLERCTHARVGTAKVPLNSTLKNRILDLTRQYGTGRDTLRCLALATADSP- 570

Query: 127 GMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 186
            +KP++M+L DSTKF +YEVNLTFVGVVGMLDPPRKEVFDSI RCRAAGIRVIVITGDNK
Sbjct: 571 -LKPDEMDLGDSTKFYTYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNK 629

Query: 187 ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE 246
           ATAEAICRRIGVFTEEEDTTGKS+SGREFDDLP+SEQ+AA A+ARLFSRVEPAHKSKIVE
Sbjct: 630 ATAEAICRRIGVFTEEEDTTGKSFSGREFDDLPVSEQRAACAKARLFSRVEPAHKSKIVE 689

Query: 247 FLQGMNEISAM 257
           FLQ MNEISAM
Sbjct: 690 FLQSMNEISAM 700

Source: Heliothis virescens

Species: Heliothis virescens

Genus: Heliothis

Family: Noctuidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328785449|ref|XP_393851.3| PREDICTED: calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type isoform 1 [Apis mellifera]

 Score =  363 bits (931), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 185/240 (77%), Positives = 200/240 (83%), Gaps = 10/240 (4%)

Query: 25  RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 84
           RR  AIAVRQD+ETKWKKEFTLEFSRDRKSMSSYC+PLK +KLG+ GPKLFVKGAPEGVL
Sbjct: 464 RRNAAIAVRQDIETKWKKEFTLEFSRDRKSMSSYCSPLKPTKLGT-GPKLFVKGAPEGVL 522

Query: 85  ERCTHARIGSQKVSLKDFSANTRFENLR-------SLEPKSKVSAIVPWGMKPEDMNLAD 137
           +RCTHAR+GS KV L     N   +  R       +L   +  +A  P  MKP+DM+L D
Sbjct: 523 DRCTHARVGSNKVPLTSTLKNRILDLTRQYGTGRDTLRCLALATADHP--MKPDDMDLDD 580

Query: 138 STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 197
           STKF +YE +LTF+GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG
Sbjct: 581 STKFYTYEKDLTFIGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 640

Query: 198 VFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
           VF E EDTTGKSYSGREFDDLP SEQKAA ARARLFSRVEPAHKSKIVEFLQ MNEISAM
Sbjct: 641 VFGENEDTTGKSYSGREFDDLPPSEQKAACARARLFSRVEPAHKSKIVEFLQSMNEISAM 700

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350403500|ref|XP_003486819.1| PREDICTED: calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type-like [Bombus impatiens]

 Score =  363 bits (931), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 191/253 (75%), Positives = 207/253 (81%), Gaps = 14/253 (5%)

Query: 14  NPPNHCVSFSG--RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSG 71
           NP  + VS SG  RR  AIA RQD+ETKWKKEFTLEFSRDRKSMSSYCTPLK +KLG+ G
Sbjct: 453 NP--YGVSKSGLDRRNTAIAARQDMETKWKKEFTLEFSRDRKSMSSYCTPLKPTKLGT-G 509

Query: 72  PKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLR-------SLEPKSKVSAIV 124
           PKLFVKGAPEGVL+RCTHAR+GS KV L     N   +  R       +L   +  +A  
Sbjct: 510 PKLFVKGAPEGVLDRCTHARVGSTKVPLTSTLKNRILDLTRQYGTGRDTLRCLALATADH 569

Query: 125 PWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD 184
           P  MKP+DM+L DSTKF +YE +LTF+GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD
Sbjct: 570 P--MKPDDMDLDDSTKFYTYEKDLTFIGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD 627

Query: 185 NKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKI 244
           NKATAEAICRRIGVF E+EDTTGKSYSGREFDDLP SEQKAA ARARLFSRVEPAHKSKI
Sbjct: 628 NKATAEAICRRIGVFGEDEDTTGKSYSGREFDDLPSSEQKAACARARLFSRVEPAHKSKI 687

Query: 245 VEFLQGMNEISAM 257
           VEFLQ MNEISAM
Sbjct: 688 VEFLQSMNEISAM 700

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022760|ref|XP_003695205.1| PREDICTED: LOW QUALITY PROTEIN: calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type-like [Apis florea]

 Score =  363 bits (931), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 185/240 (77%), Positives = 200/240 (83%), Gaps = 10/240 (4%)

Query: 25  RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 84
           RR  AIAVRQD+ETKWKKEFTLEFSRDRKSMSSYC+PLK +KLG+ GPKLFVKGAPEGVL
Sbjct: 464 RRNAAIAVRQDIETKWKKEFTLEFSRDRKSMSSYCSPLKPTKLGT-GPKLFVKGAPEGVL 522

Query: 85  ERCTHARIGSQKVSLKDFSANTRFENLR-------SLEPKSKVSAIVPWGMKPEDMNLAD 137
           +RCTHAR+GS KV L     N   +  R       +L   +  +A  P  MKP+DM+L D
Sbjct: 523 DRCTHARVGSNKVPLTSTLKNRILDLTRQYGTGRDTLRCLALATADHP--MKPDDMDLDD 580

Query: 138 STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 197
           STKF +YE +LTF+GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG
Sbjct: 581 STKFYTYEKDLTFIGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 640

Query: 198 VFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
           VF E EDTTGKSYSGREFDDLP SEQKAA ARARLFSRVEPAHKSKIVEFLQ MNEISAM
Sbjct: 641 VFGENEDTTGKSYSGREFDDLPPSEQKAACARARLFSRVEPAHKSKIVEFLQSMNEISAM 700

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357615523|gb|EHJ69709.1| sarco/endoplasmic reticulum calcium ATPase [Danaus plexippus]

 Score =  363 bits (931), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 186/251 (74%), Positives = 204/251 (81%), Gaps = 10/251 (3%)

Query: 14  NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK 73
           NP N   +   RR  AI VRQ+VETKWKKEFTLEFSRDRKSMS+YCTPLK S+LG+ GPK
Sbjct: 453 NPFNVPKTGLDRRSSAIVVRQEVETKWKKEFTLEFSRDRKSMSTYCTPLKPSRLGN-GPK 511

Query: 74  LFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRS-------LEPKSKVSAIVPW 126
           LFVKGAPEGVLERCTHAR+G+ KV L     N   E  RS       L   +  +A  P 
Sbjct: 512 LFVKGAPEGVLERCTHARVGTAKVPLSSTLKNRILELTRSYGTGRDTLRCLALATADNP- 570

Query: 127 GMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 186
            MKP++M+L DSTKF +YEVNLTFVGVVGMLDPPRKEVFDSI RCRAAGIRVIVITGDNK
Sbjct: 571 -MKPDEMDLGDSTKFYTYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNK 629

Query: 187 ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE 246
           ATAEAICRRIGVF E+EDTTGKSYSGREFDDLP++EQ+ A ARARLFSRVEPAHKSKIVE
Sbjct: 630 ATAEAICRRIGVFKEDEDTTGKSYSGREFDDLPVAEQRQACARARLFSRVEPAHKSKIVE 689

Query: 247 FLQGMNEISAM 257
           +LQ MNEISAM
Sbjct: 690 YLQSMNEISAM 700

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020025|gb|EGI60476.1| Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type [Acromyrmex echinatior]

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 184/240 (76%), Positives = 199/240 (82%), Gaps = 10/240 (4%)

Query: 25  RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 84
           RR  AI VRQD+ETKWKKEFTLEFSRDRKSMSSYC PLKSSKLG+ GPKLFVKGA EGVL
Sbjct: 425 RRAGAIVVRQDMETKWKKEFTLEFSRDRKSMSSYCVPLKSSKLGT-GPKLFVKGATEGVL 483

Query: 85  ERCTHARIGSQKVSLKDFSANTRFENLR-------SLEPKSKVSAIVPWGMKPEDMNLAD 137
           +RCTH R+G QKV L     N   +  R       +L   +  +A  P  MKP+DM+L D
Sbjct: 484 DRCTHCRVGGQKVPLTSTLKNRILDLTRQYGTGRDTLRCLALATADHP--MKPDDMDLGD 541

Query: 138 STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 197
           STKF +YE +LTF+GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG
Sbjct: 542 STKFYTYEKDLTFIGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 601

Query: 198 VFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
           VF E+EDTTGKSYSGREFDDLP SEQKAA ARARLFSRVEPAHKSKIVE+LQGMNEISAM
Sbjct: 602 VFGEDEDTTGKSYSGREFDDLPTSEQKAACARARLFSRVEPAHKSKIVEYLQGMNEISAM 661

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
UNIPROTKB|Q292Q0	1002	Ca-P60A "Calcium-transporting	0.874	0.235	0.699	2.5e-81
FB|FBgn0263006	1020	Ca-P60A "Calcium ATPase at 60A	0.874	0.231	0.699	6e-80
ZFIN|ZDB-GENE-041229-2	991	atp2a1l "ATPase, Ca++ transpor	0.822	0.224	0.605	1.5e-62
ZFIN|ZDB-GENE-020905-1	1005	atp2a1 "ATPase, Ca++ transport	0.781	0.209	0.581	9.3e-60
UNIPROTKB|P13585	994	ATP2A1 "Sarcoplasmic/endoplasm	0.851	0.231	0.546	3.8e-58
WB|WBGene00004736	1059	sca-1 [Caenorhabditis elegans	0.807	0.205	0.563	6.7e-58
UNIPROTKB|Q9DDB8	994	atp2A1 "Ca2+-ATPase" [Rana syl	0.848	0.230	0.544	1e-57
UNIPROTKB|Q9DDB9	994	atp2A1 "Ca2+-ATPase 1" [Rana c	0.844	0.229	0.554	1.7e-57
UNIPROTKB|P70083	996	atp2a1 "Sarcoplasmic/endoplasm	0.870	0.235	0.536	2.9e-57
UNIPROTKB|E1C8G4	993	ATP2A2 "Sarcoplasmic/endoplasm	0.855	0.232	0.533	1e-56

UNIPROTKB|Q292Q0 Ca-P60A "Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
 Identities = 172/246 (69%), Positives = 191/246 (77%)

Query:    20 VSFSG--RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVK 77
             V+ SG  RR  AIA R ++ETKWKKEFTLEFSRDRKSMSSYCT              FVK
Sbjct:   457 VNKSGLDRRSNAIAARGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKL-FVK 515

Query:    78 GAPEGVLERCTHARIGSQKVSL------KDFSANTRFENLRSLEPKSKVSAIVPWGMKPE 131
             GAPEGVL+RCTHAR+G+ KV L      K  +   ++   R    +    A+    ++PE
Sbjct:   516 GAPEGVLDRCTHARVGTSKVPLTSALKAKILALTGQYGTGRDTL-RCLALAVADSPIRPE 574

Query:   132 DMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEA 191
             DM+L DSTKF  YEVNLTFVGVVGMLDPPRKEVFD+I RCRAAGIRVIVITGDNKATAEA
Sbjct:   575 DMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDAIVRCRAAGIRVIVITGDNKATAEA 634

Query:   192 ICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGM 251
             ICRRIGVFTEEEDTTGKSYSGREFDDL ++EQKAAVAR+RLFSRVEP HKSKIVE+LQGM
Sbjct:   635 ICRRIGVFTEEEDTTGKSYSGREFDDLSIAEQKAAVARSRLFSRVEPQHKSKIVEYLQGM 694

Query:   252 NEISAM 257
             NEISAM
Sbjct:   695 NEISAM 700

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0016529 "sarcoplasmic reticulum" evidence=ISS

FB|FBgn0263006 Ca-P60A "Calcium ATPase at 60A" [Drosophila melanogaster (taxid:7227)]

 Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
 Identities = 172/246 (69%), Positives = 188/246 (76%)

Query:    20 VSFSG--RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVK 77
             V+ SG  RR  AIA R ++ETKWKKEFTLEFSRDRKSMSSYCT              FVK
Sbjct:   457 VNKSGLDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKL-FVK 515

Query:    78 GAPEGVLERCTHARIGSQKVSL------KDFSANTRFENLRSLEPKSKVSAIVPWGMKPE 131
             GAPEGVLERCTHAR+G+ KV L      K  +   ++   R    +    A+    MKP+
Sbjct:   516 GAPEGVLERCTHARVGTTKVPLTSALKAKILALTGQYGTGRDTL-RCLALAVADSPMKPD 574

Query:   132 DMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEA 191
             +M+L DSTKF  YEVNLTFVGVVGMLDPPRKEVFDSI RCRAAGIRVIVITGDNKATAEA
Sbjct:   575 EMDLGDSTKFYQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEA 634

Query:   192 ICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGM 251
             ICRRIGVF E+EDTTGKSYSGREFDDL  +EQKAAVAR+RLFSRVEP HKSKIVEFLQ M
Sbjct:   635 ICRRIGVFAEDEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSM 694

Query:   252 NEISAM 257
             NEISAM
Sbjct:   695 NEISAM 700

GO:0005783 "endoplasmic reticulum" evidence=ISS;IDA

GO:0005388 "calcium-transporting ATPase activity" evidence=ISS;NAS

GO:0005789 "endoplasmic reticulum membrane" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA;NAS

GO:0016529 "sarcoplasmic reticulum" evidence=NAS

GO:0006816 "calcium ion transport" evidence=IEA;NAS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051282 "regulation of sequestering of calcium ion" evidence=IMP

GO:0007274 "neuromuscular synaptic transmission" evidence=IMP

GO:0005635 "nuclear envelope" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005811 "lipid particle" evidence=IDA

GO:0006874 "cellular calcium ion homeostasis" evidence=IMP

GO:0030322 "stabilization of membrane potential" evidence=IGI

GO:0007629 "flight behavior" evidence=IGI

ZFIN|ZDB-GENE-041229-2 atp2a1l "ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 like" [Danio rerio (taxid:7955)]

 Score = 644 (231.8 bits), Expect = 1.5e-62, P = 1.5e-62
 Identities = 146/241 (60%), Positives = 169/241 (70%)

Query:    27 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLER 86
             E+A A    V+   KK FTLEFSRDRKSMS YCT              FVKGAPEGV++R
Sbjct:   466 ERANACCSVVKQLMKKNFTLEFSRDRKSMSVYCTPVKGDAGSKM----FVKGAPEGVIDR 521

Query:    87 CTHARIGSQKVSL----KDFSAN------TRFENLRSLEPKSKVSAIVPWGMKPEDMNLA 136
             CT+ R+GS +V L    KD   N      T  + LR L   ++ S   P  +K E+MNL 
Sbjct:   522 CTYVRVGSTRVPLTGAVKDKIMNVIKEWGTGRDTLRCLALATRDS---P--LKVEEMNLE 576

Query:   137 DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 196
             DSTKFA YE +LTFVG VGMLDPPRKEV  SI  CRAAGIRVI+ITGDNK TA AICRRI
Sbjct:   577 DSTKFADYETDLTFVGCVGMLDPPRKEVTGSIELCRAAGIRVIMITGDNKGTAVAICRRI 636

Query:   197 GVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISA 256
             G+F+E+ED TGK+Y+GREFDDLP SEQ  AV RA  F+RVEP+HKSKIVEFLQG +EI+A
Sbjct:   637 GIFSEDEDVTGKAYTGREFDDLPHSEQSEAVRRACCFARVEPSHKSKIVEFLQGYDEITA 696

Query:   257 M 257
             M
Sbjct:   697 M 697

GO:0019829 "cation-transporting ATPase activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-020905-1 atp2a1 "ATPase, Ca++ transporting, cardiac muscle, fast twitch 1" [Danio rerio (taxid:7955)]

 Score = 619 (223.0 bits), Expect = 9.3e-60, P = 9.3e-60
 Identities = 132/227 (58%), Positives = 165/227 (72%)

Query:    41 KKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTHARIGSQKVSL- 99
             KK+FTLEFSRDRKSMS YC+              FVKGAPEGV++RC + R+G+ +V L 
Sbjct:   480 KKDFTLEFSRDRKSMSVYCSPAKASKAPVGNKM-FVKGAPEGVIDRCAYVRVGTTRVPLT 538

Query:   100 ---KD-FSA-----NTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTF 150
                KD   A      T  + LR L   ++ +   P  ++PE+MNL DSTKFA YE +LTF
Sbjct:   539 GPVKDKIMAVIKEWGTGRDTLRCLALATRDN---P--LRPEEMNLEDSTKFAEYETDLTF 593

Query:   151 VGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSY 210
             VG VGMLDPPRKEV  SI  CRAAGIRVI+ITGDNK TA AICRRIG+F+++ED TG+++
Sbjct:   594 VGCVGMLDPPRKEVVGSIELCRAAGIRVIMITGDNKGTAVAICRRIGIFSDDEDVTGRAF 653

Query:   211 SGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
             +GREFDDLPL +Q+ AV +A  ++RVEP+HKSKIVEFLQG +EI+AM
Sbjct:   654 TGREFDDLPLPQQREAVRKACCYARVEPSHKSKIVEFLQGFDEITAM 700

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA;ISS

GO:0019829 "cation-transporting ATPase activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0006937 "regulation of muscle contraction" evidence=IMP

GO:0009612 "response to mechanical stimulus" evidence=IMP

GO:0006874 "cellular calcium ion homeostasis" evidence=IMP

GO:0006200 "ATP catabolic process" evidence=ISS

GO:0006942 "regulation of striated muscle contraction" evidence=ISS

GO:0016529 "sarcoplasmic reticulum" evidence=ISS

GO:0031448 "positive regulation of fast-twitch skeletal muscle fiber contraction" evidence=ISS

GO:0031674 "I band" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0031673 "H zone" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0045988 "negative regulation of striated muscle contraction" evidence=ISS

GO:0016787 "hydrolase activity" evidence=IEA

GO:0045932 "negative regulation of muscle contraction" evidence=IMP

UNIPROTKB|P13585 ATP2A1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Gallus gallus (taxid:9031)]

 Score = 604 (217.7 bits), Expect = 3.8e-58, P = 3.8e-58
 Identities = 129/236 (54%), Positives = 157/236 (66%)

Query:    27 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLER 86
             E+A A    ++   KKEFTLEFSRDRKSMS YC+              FVKGAPEGV++R
Sbjct:   466 ERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCSPAKASRAAVGNKM-FVKGAPEGVIDR 524

Query:    87 CTHARIGSQKVSLKDFSANTRFENLRSL---EPKSKVSAIVPWGMKP--EDMNLADSTKF 141
             C + R+G+ +V L           ++         +  A+      P  EDM L DSTKF
Sbjct:   525 CNYVRVGTTRVPLTPAVKEKILAVIKEWGTGRDTLRCLALATRDTPPKMEDMMLVDSTKF 584

Query:   142 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 201
             A YE +LTFVG VGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICRRIG+FTE
Sbjct:   585 AEYETDLTFVGCVGMLDPPRKEVMGSIRLCRDAGIRVIMITGDNKGTAIAICRRIGIFTE 644

Query:   202 EEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
             +E+ +G++Y+GREFDDLP +EQ+ A  RA  F+RVEP HKSKIVEFLQ  +EI+AM
Sbjct:   645 DEEVSGRAYTGREFDDLPPAEQREACRRACCFARVEPTHKSKIVEFLQSFDEITAM 700

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0045988 "negative regulation of striated muscle contraction" evidence=ISS

GO:0016529 "sarcoplasmic reticulum" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0006942 "regulation of striated muscle contraction" evidence=ISS

GO:0005388 "calcium-transporting ATPase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0006816 "calcium ion transport" evidence=ISS

GO:0033017 "sarcoplasmic reticulum membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0031673 "H zone" evidence=ISS

GO:0031674 "I band" evidence=ISS

GO:0006200 "ATP catabolic process" evidence=ISS

GO:0031448 "positive regulation of fast-twitch skeletal muscle fiber contraction" evidence=ISS

WB|WBGene00004736 sca-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 603 (217.3 bits), Expect = 6.7e-58, P = 6.7e-58
 Identities = 128/227 (56%), Positives = 149/227 (65%)

Query:    36 VETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTHARIGSQ 95
             ++ KWKKEFTLEFSRDRKSMS+YC               FVKGAPEGVL RCTH R+  Q
Sbjct:   479 IQQKWKKEFTLEFSRDRKSMSAYC----FPASGGSGAKMFVKGAPEGVLGRCTHVRVNGQ 534

Query:    96 KVSLKDFSANTRFENLRSLEPKSKVSAIVPWG-----MKPEDMNLADSTKFASYEVNLTF 150
             KV L         +              +  G     +   +MNL DST+F  YE ++TF
Sbjct:   535 KVPLTSAMTQKIVDQCVQYGTGRDTLRCLALGTIDTPVSVSNMNLEDSTQFVKYEQDITF 594

Query:   151 VGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSY 210
             VGVVGMLDPPR EV DSI  C  AGIRVI+ITGDNK TAEAI RRIG+F E EDTTGK+Y
Sbjct:   595 VGVVGMLDPPRTEVSDSIKACNHAGIRVIMITGDNKNTAEAIGRRIGLFGENEDTTGKAY 654

Query:   211 SGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
             +GREFDDLP  +Q  A  RA+LF+RVEP+HKSKIV+ LQ   EI+AM
Sbjct:   655 TGREFDDLPPEQQSEACRRAKLFARVEPSHKSKIVDILQSQGEITAM 701

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000003 "reproduction" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0071688 "striated muscle myosin thick filament assembly" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

GO:0006874 "cellular calcium ion homeostasis" evidence=IMP

GO:0030104 "water homeostasis" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0040024 "dauer larval development" evidence=IGI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=IGI

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0042175 "nuclear outer membrane-endoplasmic reticulum membrane network" evidence=IDA

GO:0031490 "chromatin DNA binding" evidence=IPI

GO:0070509 "calcium ion import" evidence=IDA

GO:0016529 "sarcoplasmic reticulum" evidence=IDA

GO:0005635 "nuclear envelope" evidence=IDA

GO:0031410 "cytoplasmic vesicle" evidence=IDA

UNIPROTKB|Q9DDB8 atp2A1 "Ca2+-ATPase" [Rana sylvatica (taxid:45438)]

 Score = 600 (216.3 bits), Expect = 1.0e-57, P = 1.0e-57
 Identities = 129/237 (54%), Positives = 160/237 (67%)

Query:    27 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLER 86
             E+A A    ++   KKEFTLEFSRDRKSMS YCT              FVKGAPEGV++R
Sbjct:   466 ERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPAKASRAAVGNKM-FVKGAPEGVIDR 524

Query:    87 CTHARIGSQKV----SLKDFSANTRFENLRSLEPKSKVSAIVPWGMKP--EDMNLADSTK 140
             C + R+G+ +V    ++KD   N   +   +     +  A+      P  EDM L D+TK
Sbjct:   525 CNYVRVGTTRVPFTSAIKD-KINAVVKEWGTGRDTLRCLALATRDTPPKREDMVLEDATK 583

Query:   141 FASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 200
             FA YE +LTFVG VGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICRRIG+F+
Sbjct:   584 FAEYETDLTFVGCVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFS 643

Query:   201 EEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
             E +D + ++Y+GREFDDLP +EQ+ AV  A  F+RVEP+HKSKIVEFLQ  +EI+AM
Sbjct:   644 ENDDVSTRAYTGREFDDLPPAEQREAVKHASCFARVEPSHKSKIVEFLQSCDEITAM 700

GO:0005388 "calcium-transporting ATPase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISS

GO:0006200 "ATP catabolic process" evidence=ISS

GO:0006816 "calcium ion transport" evidence=ISS

GO:0006942 "regulation of striated muscle contraction" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016529 "sarcoplasmic reticulum" evidence=ISS

GO:0031448 "positive regulation of fast-twitch skeletal muscle fiber contraction" evidence=ISS

GO:0031673 "H zone" evidence=ISS

GO:0031674 "I band" evidence=ISS

GO:0045988 "negative regulation of striated muscle contraction" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

UNIPROTKB|Q9DDB9 atp2A1 "Ca2+-ATPase 1" [Rana clamitans (taxid:145282)]

 Score = 598 (215.6 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 132/238 (55%), Positives = 160/238 (67%)

Query:    27 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLER 86
             E+A A    ++   KKEFTLEFSRDRKSMS YCT              FVKGAPEGV++R
Sbjct:   466 ERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPAKASRAAVGNKM-FVKGAPEGVIDR 524

Query:    87 CTHARIGSQKV----SLKD--FSANTRFENLR-SLEPKSKVSAIVPWGMKPEDMNLADST 139
             C + R+G+ +V     +KD   S    +   R +L   +  +   P   K EDM L DST
Sbjct:   525 CNYVRVGTTRVPFTSGIKDKILSVVKEWGTGRDTLRCLALATRDTP--PKREDMVLEDST 582

Query:   140 KFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 199
             KFA YE +LTFVG VGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICRRIG+F
Sbjct:   583 KFADYETDLTFVGCVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 642

Query:   200 TEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
              E +D + ++Y+GREFDDLP +EQ+ AV  A  F+RVEP+HKSKIVEFLQ  +EI+AM
Sbjct:   643 GENDDVSSRAYTGREFDDLPPAEQREAVKHASCFARVEPSHKSKIVEFLQSCDEITAM 700

GO:0005388 "calcium-transporting ATPase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISS

GO:0006200 "ATP catabolic process" evidence=ISS

GO:0006816 "calcium ion transport" evidence=ISS

GO:0006942 "regulation of striated muscle contraction" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016529 "sarcoplasmic reticulum" evidence=ISS

GO:0031448 "positive regulation of fast-twitch skeletal muscle fiber contraction" evidence=ISS

GO:0031673 "H zone" evidence=ISS

GO:0031674 "I band" evidence=ISS

GO:0045988 "negative regulation of striated muscle contraction" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

UNIPROTKB|P70083 atp2a1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Makaira nigricans (taxid:13604)]

 Score = 596 (214.9 bits), Expect = 2.9e-57, P = 2.9e-57
 Identities = 133/248 (53%), Positives = 162/248 (65%)

Query:    17 NHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFV 76
             N  V    R E+A A    ++   KK FTLEFSRDRKSMS YCT              FV
Sbjct:   456 NSNVKNLSRIERANACCTVIKQLMKKNFTLEFSRDRKSMSVYCTPAKGDGGAKM----FV 511

Query:    77 KGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLR-------SLEPKSKVSAIVPWGMK 129
             KGAPEGV++RC + R+G+ +V L           +R       +L   +  +   P  +K
Sbjct:   512 KGAPEGVIDRCAYVRVGTTRVPLTSAIKEKIMAVIRDWGTGRDTLRCLALATRDTP--LK 569

Query:   130 PEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATA 189
              E+MNL DSTKFA YE ++TFVG VGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA
Sbjct:   570 VEEMNLEDSTKFADYETDMTFVGCVGMLDPPRKEVTGSIELCRDAGIRVIMITGDNKGTA 629

Query:   190 EAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQ 249
              AICRRIG+F E+ED + K+Y+GREFDDLP  +Q  AV RA  F+RVEP+HKSKIVEFLQ
Sbjct:   630 IAICRRIGIFKEDEDVSNKAYTGREFDDLPSQDQAEAVRRACCFARVEPSHKSKIVEFLQ 689

Query:   250 GMNEISAM 257
             G ++I+AM
Sbjct:   690 GNDDITAM 697

GO:0005388 "calcium-transporting ATPase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISS

GO:0006200 "ATP catabolic process" evidence=ISS

GO:0006816 "calcium ion transport" evidence=ISS

GO:0006942 "regulation of striated muscle contraction" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016529 "sarcoplasmic reticulum" evidence=ISS

GO:0031448 "positive regulation of fast-twitch skeletal muscle fiber contraction" evidence=ISS

GO:0031673 "H zone" evidence=ISS

GO:0031674 "I band" evidence=ISS

GO:0045988 "negative regulation of striated muscle contraction" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

UNIPROTKB|E1C8G4 ATP2A2 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 2" [Gallus gallus (taxid:9031)]

 Score = 591 (213.1 bits), Expect = 1.0e-56, P = 1.0e-56
 Identities = 127/238 (53%), Positives = 156/238 (65%)

Query:    25 RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVL 84
             R E+A A    ++   KKEFTLEFSRDRKSMS YCT              FVKGAPEGV+
Sbjct:   464 RIERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPSRTSMSKM--FVKGAPEGVI 521

Query:    85 ERCTHARIGSQKVSLKDFSANTRFENLRSL---EPKSKVSAIVPWGMKP--EDMNLADST 139
             +RCTH R+G+ K+ L           +R         +  A+      P  E+MNL DS+
Sbjct:   522 DRCTHVRVGNAKIPLSSGIKQKIMSVIREWGTGRDTLRCLALATHDNPPRKEEMNLEDSS 581

Query:   140 KFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 199
              F +YE NLTFVG VGMLDPPR EV  SI  C+ AGIRVI+ITGDNK TA AICRRIG+F
Sbjct:   582 NFINYETNLTFVGCVGMLDPPRIEVASSIKLCKQAGIRVIMITGDNKGTAVAICRRIGIF 641

Query:   200 TEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
              E+ED + K+++GREFD+L L+ Q+ A   AR F+RVEP+HKSKIVEFLQ  +EI+AM
Sbjct:   642 VEDEDVSTKAFTGREFDELSLAAQRDACHHARCFARVEPSHKSKIVEFLQSFDEITAM 699

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0002026 "regulation of the force of heart contraction" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEA

GO:0006984 "ER-nucleus signaling pathway" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0044548 "S100 protein binding" evidence=IEA

GO:0045822 "negative regulation of heart contraction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P04191	AT2A1_RABIT	3, ., 6, ., 3, ., 8	0.5560	0.8333	0.2247	yes	N/A
Q9YGL9	AT2A3_CHICK	3, ., 6, ., 3, ., 8	0.5555	0.8259	0.2140	yes	N/A
O46674	AT2A2_CANFA	3, ., 6, ., 3, ., 8	0.5550	0.8481	0.2296	yes	N/A
P13585	AT2A1_CHICK	3, ., 6, ., 3, ., 8	0.5498	0.8111	0.2203	yes	N/A
Q292Q0	ATC1_DROPS	3, ., 6, ., 3, ., 8	0.7448	0.8407	0.2265	yes	N/A
Q0VCY0	AT2A1_BOVIN	3, ., 6, ., 3, ., 8	0.5643	0.8296	0.2255	yes	N/A
P11607	AT2A2_PIG	3, ., 6, ., 3, ., 8	0.5593	0.8481	0.2197	yes	N/A
Q64578	AT2A1_RAT	3, ., 6, ., 3, ., 8	0.5643	0.8333	0.2263	yes	N/A
Q7PPA5	ATC1_ANOGA	3, ., 6, ., 3, ., 8	0.7283	0.8814	0.2337	yes	N/A
Q8R429	AT2A1_MOUSE	3, ., 6, ., 3, ., 8	0.5684	0.8333	0.2263	yes	N/A
P22700	ATC1_DROME	3, ., 6, ., 3, ., 8	0.7448	0.8407	0.2225	yes	N/A
O14983	AT2A1_HUMAN	3, ., 6, ., 3, ., 8	0.5381	0.8037	0.2167	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	270
TIGR01116	917	TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic	6e-87
COG0474	917	COG0474, MgtA, Cation transport ATPase [Inorganic	2e-41
TIGR01494	543	TIGR01494, ATPase_P-type, ATPase, P-type (transpor	3e-27
TIGR01522	884	TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-	8e-26
TIGR01517	944	TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-	6e-21
TIGR01106	997	TIGR01106, ATPase-IIC_X-K, sodium or proton efflux	3e-19
PRK10517	902	PRK10517, PRK10517, magnesium-transporting ATPase	7e-19
TIGR01524	867	TIGR01524, ATPase-IIIB_Mg, magnesium-translocating	4e-17
TIGR01523	1053	TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu	3e-16
TIGR01647	754	TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e	5e-13
PRK15122	903	PRK15122, PRK15122, magnesium-transporting ATPase;	8e-13
pfam13246	91	pfam13246, Hydrolase_like2, Putative hydrolase of	1e-12
COG2217	713	COG2217, ZntA, Cation transport ATPase [Inorganic	2e-10
TIGR01657	1054	TIGR01657, P-ATPase-V, P-type ATPase of unknown pu	6e-09
TIGR01525	556	TIGR01525, ATPase-IB_hvy, heavy metal translocatin	2e-07
TIGR01512	536	TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb	2e-06
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	2e-06
TIGR01511	572	TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans	2e-06
PLN03190	1178	PLN03190, PLN03190, aminophospholipid translocase;	5e-05
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	2e-04
COG2216	681	COG2216, KdpB, High-affinity K+ transport system,	7e-04
PRK11033	741	PRK11033, zntA, zinc/cadmium/mercury/lead-transpor	7e-04
PRK01122	679	PRK01122, PRK01122, potassium-transporting ATPase	8e-04
TIGR01652	1057	TIGR01652, ATPase-Plipid, phospholipid-translocati	0.001
TIGR01497	675	TIGR01497, kdpB, K+-transporting ATPase, B subunit	0.001

>gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase

 Score =  277 bits (709), Expect = 6e-87
 Identities = 126/249 (50%), Positives = 156/249 (62%), Gaps = 12/249 (4%)

Query: 14  NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK 73
             P      S +R  A+        K+KK  TLEFSRDRKSMS  C P       S+G K
Sbjct: 394 GLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-------STGNK 446

Query: 74  LFVKGAPEGVLERCTHARIG-SQKVSLKDFSANTRFENLRSLEPKSKVS----AIVPWGM 128
           LFVKGAPEGVLERCTH   G  + V L D   NT    ++ +     +     A      
Sbjct: 447 LFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPD 506

Query: 129 KPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKAT 188
             E+  L+D   F + E +LTF+GVVGMLDPPR EV D+I +CR AGIRVI+ITGDNK T
Sbjct: 507 PREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKET 566

Query: 189 AEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFL 248
           AEAICRRIG+F+ +ED T KS++GREFD++  ++Q+AA   A LFSRVEP+HKS++VE L
Sbjct: 567 AEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELL 626

Query: 249 QGMNEISAM 257
           Q   EI AM
Sbjct: 627 QEQGEIVAM 635

This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917

>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score =  151 bits (384), Expect = 2e-41
 Identities = 73/228 (32%), Positives = 101/228 (44%), Gaps = 28/228 (12%)

Query: 39  KWKKEF----TLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGS 94
             + E+     + F  +RK MS         K       LFVKGAPE +LERC       
Sbjct: 435 GLEVEYPILAEIPFDSERKRMSVIV------KTDEGKYILFVKGAPEVILERCKS----- 483

Query: 95  QKVSLKDFSANTRFENLRSLEPK-----SKVSAIVPWGMKPEDMNLADSTKFASYEVNLT 149
                         E LR+LE       S+   ++    K  D    D       E +L 
Sbjct: 484 -----IGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEV-DEIESDLV 537

Query: 150 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKS 209
           F+G+ G+ DPPR++V ++I   R AGI+V +ITGD+  TA AI +  G+  E E  +   
Sbjct: 538 FLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE--SALV 595

Query: 210 YSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
             G E D L   E    V    +F+RV P  K++IVE LQ    + AM
Sbjct: 596 IDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAM 643

Length = 917

>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC

 Score =  109 bits (275), Expect = 3e-27
 Identities = 58/217 (26%), Positives = 82/217 (37%), Gaps = 70/217 (32%)

Query: 41  KKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLK 100
           K      FS   K MS         +       LFVKGAPE +LERC +      +    
Sbjct: 309 KILDVFPFSSVLKRMSVIV------ETPDGSDLLFVKGAPEFILERCNNY-----EEKYL 357

Query: 101 DFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPP 160
           + +       LR L       A                      E +L F+G++   DP 
Sbjct: 358 ELARQG----LRVL-------AFA----------------SKELEDDLEFLGLITFEDPL 390

Query: 161 RKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPL 220
           R +  ++I   +AAGI+V++ITGDN  TA+AI + +G+                      
Sbjct: 391 RPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGID--------------------- 429

Query: 221 SEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
                      +F+RV P  K +IVE LQ    I AM
Sbjct: 430 -----------VFARVSPEQKLQIVEALQKKGHIVAM 455

The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543

>gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase

 Score =  106 bits (265), Expect = 8e-26
 Identities = 62/224 (27%), Positives = 114/224 (50%), Gaps = 23/224 (10%)

Query: 34  QDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIG 93
            D+   + +   + FS +RK M+  C   +           F+KGA E VL+ CT+ +  
Sbjct: 422 DDLRETYIRVAEVPFSSERKWMAVKCVHRQDRS-----EMCFMKGAYEQVLKYCTYYQ-- 474

Query: 94  SQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGV 153
            +       +   R + ++  E  +++++    G++     +A ++     +  LTF+G+
Sbjct: 475 KKDGKTLTLTQQQR-DVIQ--EEAAEMASA---GLRV----IAFASGPEKGQ--LTFLGL 522

Query: 154 VGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGR 213
           VG+ DPPR  V +++      G+R+I+ITGD++ TA +I RR+G+ +     T +S SG 
Sbjct: 523 VGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPS----KTSQSVSGE 578

Query: 214 EFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
           + D +   +    V +  +F+R  P HK KIV+ LQ   ++ AM
Sbjct: 579 KLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622

This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884

>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase

 Score = 91.8 bits (228), Expect = 6e-21
 Identities = 64/218 (29%), Positives = 93/218 (42%), Gaps = 31/218 (14%)

Query: 48  FSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTH-------ARIGSQ--KVS 98
           F+ +RK MS     +     G    + F KGA E VL+ C         A   S   K  
Sbjct: 480 FNSERKFMSV----VVKHSGGKY--REFRKGASEIVLKPCRKRLDSNGEATPISDDDKDR 533

Query: 99  LKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLD 158
             D       + LR++        +      PE+    D          LT +GVVG+ D
Sbjct: 534 CADVIEPLASDALRTI-------CLAYRDFAPEEFPRKDYP-----NKGLTLIGVVGIKD 581

Query: 159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDL 218
           P R  V +++  C+ AGI V ++TGDN  TA+AI R  G+ T      G +  G+EF  L
Sbjct: 582 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT----FGGLAMEGKEFRSL 637

Query: 219 PLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISA 256
              E    + + R+ +R  P  K  +V  L+ M E+ A
Sbjct: 638 VYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVA 675

This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944

>gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

 Score = 86.8 bits (215), Expect = 3e-19
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 38/222 (17%)

Query: 69  SSGPK--LFVKGAPEGVLERCTHARIGSQKVSLKDFSA---NTRFENLRSLEPKSKVSAI 123
              P+  L +KGAPE +LERC+   I  ++  L +         +  L  L    +V   
Sbjct: 472 PRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGL--GERVLGF 529

Query: 124 VPWGMKPEDMNLADSTKFASYEVN-----LTFVGVVGMLDPPRKEVFDSIARCRAAGIRV 178
                 P++    +  +F + +VN     L FVG++ M+DPPR  V D++ +CR+AGI+V
Sbjct: 530 CHL-YLPDE-QFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKV 587

Query: 179 IVITGDNKATAEAICRRIGVFTE----EEDTTGK----------------SYSGREFDDL 218
           I++TGD+  TA+AI + +G+ +E     ED   +                   G +  D+
Sbjct: 588 IMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647

Query: 219 PLSEQKAAVARAR---LFSRVEPAHKSKIVEFLQGMNEISAM 257
             SEQ   + +     +F+R  P  K  IVE  Q    I A+
Sbjct: 648 T-SEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAV 688

This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997

>gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional

 Score = 85.9 bits (213), Expect = 7e-19
 Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 36/228 (15%)

Query: 33  RQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI 92
            + + ++W+K   + F  +R+ MS            +   +L  KGA E +L  C+  R 
Sbjct: 434 ARSLASRWQKIDEIPFDFERRRMSVVV------AENTEHHQLICKGALEEILNVCSQVRH 487

Query: 93  GSQKVSLKD--------FSANTRFENLRSLEPKSKVSAIVPWGMKP--EDMNLADSTKFA 142
             + V L D         +     + LR       V A+    +     D   AD     
Sbjct: 488 NGEIVPLDDIMLRRIKRVTDTLNRQGLR-------VVAVATKYLPAREGDYQRAD----- 535

Query: 143 SYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEE 202
             E +L   G +  LDPP++    ++   +A+G+ V ++TGD++  A  +C  +G+    
Sbjct: 536 --ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL---- 589

Query: 203 EDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQG 250
               G+   G + + L   E      R  LF+R+ P HK +IV  L+ 
Sbjct: 590 --DAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKR 635

Length = 902

>gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase

 Score = 80.7 bits (199), Expect = 4e-17
 Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 20/213 (9%)

Query: 39  KWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVS 98
           +WKK   + F  DR+ +S            +   +L  KGA E +L  CTH R G   V+
Sbjct: 405 RWKKVDEIPFDFDRRRLSVVVEN------RAEVTRLICKGAVEEMLTVCTHKRFGGAVVT 458

Query: 99  LKDFSANTRFENLRSLEPKSKVSAI--VPWGMKPEDMNLADSTKFASYEVNLTFVGVVGM 156
           L +    +    L+ +  +     I  +    K   +  AD TK  + E  L   G +G 
Sbjct: 459 LSE----SEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTK--TDEEQLIIEGFLGF 512

Query: 157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFD 216
           LDPP++   ++IA     GI V V+TGDN+     IC+ +G+             G + +
Sbjct: 513 LDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGI------DANDFLLGADIE 566

Query: 217 DLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQ 249
           +L   E    + +  +F+R+ P  KS+I+  L+
Sbjct: 567 ELSDEELARELRKYHIFARLTPMQKSRIIGLLK 599

This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867

>gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type

 Score = 78.1 bits (192), Expect = 3e-16
 Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 13/197 (6%)

Query: 74  LFVKGAPEGVLERCT--HARIGSQKVSLKDFSANTRFENLRSLEPKS-KVSAIVPWGMKP 130
           ++ KGA E ++E C+  + + G +   L+D        N+ SL  +  +V A        
Sbjct: 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDK 613

Query: 131 EDMN----LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 186
            D N      ++   A+ E +L F+G++G+ DPPR E   ++ +C  AGI V ++TGD  
Sbjct: 614 ADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFP 673

Query: 187 ATAEAICRRIGVFT------EEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAH 240
            TA+AI + +G+         +E       +G +FD L   E     A   + +R  P  
Sbjct: 674 ETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQT 733

Query: 241 KSKIVEFLQGMNEISAM 257
           K K++E L       AM
Sbjct: 734 KVKMIEALHRRKAFCAM 750

Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053

>gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase

 Score = 68.1 bits (167), Expect = 5e-13
 Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 13/117 (11%)

Query: 150 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG----VFTEEEDT 205
           F+G++ + DPPR +  ++I R R  G+ V ++TGD+ A A+   RR+G    ++T +   
Sbjct: 433 FLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLL 492

Query: 206 TGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTG 262
            G +      DDLP    +  V  A  F+ V P HK +IVE LQ    +  M   TG
Sbjct: 493 KGDNR-----DDLPSGLGE-MVEDADGFAEVFPEHKYEIVEILQKRGHLVGM---TG 540

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754

>gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional

 Score = 67.7 bits (166), Expect = 8e-13
 Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 26/185 (14%)

Query: 74  LFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSL-----EPKSKVSAI----V 124
           L  KGA E +L   TH R G     L +     R E L +L         +V  +    +
Sbjct: 467 LICKGAVEEMLAVATHVRDGDTVRPLDE----ARRERLLALAEAYNADGFRVLLVATREI 522

Query: 125 PWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD 184
           P G      + AD       E +L   G +  LDPP++    +IA  R  G+ V V+TGD
Sbjct: 523 PGGESRAQYSTAD-------ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575

Query: 185 NKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKI 244
           N      ICR +G+        G+   G E + +  +     V    +F+++ P  KS++
Sbjct: 576 NPIVTAKICREVGL------EPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRV 629

Query: 245 VEFLQ 249
           ++ LQ
Sbjct: 630 LKALQ 634

Length = 903

>gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit

 Score = 61.9 bits (151), Expect = 1e-12
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 35 DVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK-LFVKGAPEGVLERCTH 89
          ++  ++ +   + F+ +RK MS+        KL       LFVKGAPE +LERC+ 
Sbjct: 41 ELRARYPRVAEIPFNSERKRMSTVH------KLEDDDGYRLFVKGAPERILERCST 90

This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91

>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 22/53 (41%), Positives = 37/53 (69%)

Query: 146 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
           V+   VGV+ + D  R +  ++IA  +A GI+V+++TGDN+ TAEAI + +G+
Sbjct: 524 VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI 576

Length = 713

>gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V)

 Score = 56.2 bits (136), Expect = 6e-09
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 23/157 (14%)

Query: 46  LEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQ-KVSLKDFSA 104
            +FS   + MS       ++   S  P  FVKGAPE +   C+   + S  +  LK ++ 
Sbjct: 558 FQFSSALQRMSVIV---STNDERS--PDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTR 612

Query: 105 NTRFENLRSLEPKSKVSAIVPWGMKP-EDMNL--ADSTKFASYEVNLTFVGVVGMLDPPR 161
                             ++    K    + L  A      + E NLTF+G +   +P +
Sbjct: 613 EG--------------YRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLK 658

Query: 162 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
            +  + I   + A IR ++ITGDN  TA  + R  G+
Sbjct: 659 PDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI 695

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054

>gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 142 ASYEVNLTFVGVVGMLDPPRKEVFDSIAR-CRAAGIRVIVITGDNKATAEAICRRIGV 198
               V+   +GV+ + D  R E  ++IA   RA GI+++++TGDN++ AEA+   +G+
Sbjct: 367 VFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI 424

This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556

>gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 146 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGI-RVIVITGDNKATAEAICRRIGV 198
            + T++G + + D PR +  ++IA  +A GI +V+++TGD +A AE + R +G+
Sbjct: 349 RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI 402

This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 46.9 bits (111), Expect = 2e-06
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 109 ENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFAS--YEVNLTFVGVVGMLDPPRKEVFD 166
           ENL     +  V  ++   +  E++        A+    ++L  +G++ + DP      +
Sbjct: 42  ENLTKEGREELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGARE 101

Query: 167 SIARCRAAGIRVIVITGDNKATAEAICRRIGVF 199
           ++   + AGI++ ++TGDN+ TA AI R +G+F
Sbjct: 102 ALKELKEAGIKLAILTGDNRLTANAIARLLGLF 134

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 17/54 (31%), Positives = 31/54 (57%)

Query: 145 EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
            VN    GV+ + D  + E  + I   +  GI  +++TGDN+ TA+A+ + +G+
Sbjct: 400 AVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI 453

This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572

>gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional

 Score = 44.1 bits (104), Expect = 5e-05
 Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 28/162 (17%)

Query: 47  EFSRDRKSMSSYCTPLKSSKLG--SSGPKLFVKGAPE---GVLERCTHAR-IGSQKVSLK 100
           EF  DRK MS          LG      K+FVKGA      V++R  +   I + +  L 
Sbjct: 610 EFDSDRKRMSVI--------LGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLH 661

Query: 101 DFSA---NTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFA-------SYEVNLTF 150
            +S+    T    +R L      S    W    E  + A   + A       + E NLT 
Sbjct: 662 TYSSLGLRTLVVGMRELND----SEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717

Query: 151 VGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI 192
           +G   + D  ++ V ++I   R AGI+V V+TGD + TA +I
Sbjct: 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759

Length = 1178

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
           DP R +   ++ R   AG R++++TGDN  TA AI +  G+
Sbjct: 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI 689

Length = 834

>gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 150 FVGVVGMLD---PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
            +GV+ + D   P  KE F  +   R  GI+ ++ITGDN  TA AI    GV
Sbjct: 438 ILGVIYLKDIVKPGIKERFAEL---RKMGIKTVMITGDNPLTAAAIAAEAGV 486

Length = 681

>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 15/50 (30%), Positives = 29/50 (58%)

Query: 149 TFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
             +G++ + D  R +   +I+  +A GI+ +++TGDN   A AI   +G+
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI 607

Length = 741

>gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional

 Score = 40.2 bits (95), Expect = 8e-04
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 150 FVGVVGMLD---PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
            +GV+ + D   P  KE F  +   R  GI+ ++ITGDN  TA AI    GV
Sbjct: 436 VLGVIYLKDIVKPGIKERFAEL---RKMGIKTVMITGDNPLTAAAIAAEAGV 484

Length = 679

>gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 23/160 (14%)

Query: 46  LEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPE---GVLERCTHARIGSQKVSLKDF 102
           LEF+ DRK MS         +      KL  KGA       L    +      K  L+++
Sbjct: 515 LEFNSDRKRMSVIV------RNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENY 568

Query: 103 SANTRFENLRSLEPKSKV---SAIVPWGMKPEDMNLA------DSTKFASY-EVNLTFVG 152
           ++    E LR+L    +         W  +  + + A           A   E +L  +G
Sbjct: 569 AS----EGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLG 624

Query: 153 VVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI 192
              + D  ++ V ++I   R AGI++ V+TGD   TA  I
Sbjct: 625 ATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINI 664

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057

>gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 19/122 (15%)

Query: 94  SQKVSLKDFSANTR-----FENLRSLEPKSKVSAIVPW-----GMKPEDMNLA------- 136
           S   +  +F+A TR      +N R +  K  V AI        G  P D++ A       
Sbjct: 366 SLHATFVEFTAQTRMSGINLDNGRMIR-KGAVDAIKRHVEANGGHIPTDLDQAVDQVARQ 424

Query: 137 DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 196
             T     E N  + GV+ + D  +  + +  A+ R  GI+ I+ITGDN+ TA AI    
Sbjct: 425 GGTPLVVCEDNRIY-GVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA 483

Query: 197 GV 198
           GV
Sbjct: 484 GV 485

This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	270
KOG0202|consensus	972		100.0
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	100.0
KOG0204|consensus	1034		100.0
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	100.0
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	100.0
KOG0208|consensus	1140		100.0
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	100.0
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	100.0
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	100.0
PRK15122	903	magnesium-transporting ATPase; Provisional	100.0
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	100.0
PLN03190	1178	aminophospholipid translocase; Provisional	100.0
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	100.0
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	100.0
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	100.0
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	100.0
KOG0206|consensus	1151		100.0
KOG0203|consensus	1019		100.0
KOG0209|consensus	1160		100.0
KOG0210|consensus	1051		100.0
PRK14010	673	potassium-transporting ATPase subunit B; Provision	100.0
PRK01122	679	potassium-transporting ATPase subunit B; Provision	100.0
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	99.96
KOG0205|consensus	942		99.95
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	99.93
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	99.91
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	99.89
KOG0207|consensus	951		99.86
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.82
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	99.81
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	99.74
PRK10671	834	copA copper exporting ATPase; Provisional	99.71
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	99.67
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	99.64
COG4087	152	Soluble P-type ATPase [General function prediction	99.46
PF13246	91	Hydrolase_like2: Putative hydrolase of sodium-pota	99.44
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	98.74
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	98.7
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.62
KOG1615|consensus	227		98.62
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	98.44
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	98.33
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	98.3
PRK13582	205	thrH phosphoserine phosphatase; Provisional	98.22
PRK11133	322	serB phosphoserine phosphatase; Provisional	98.21
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	98.2
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.17
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.14
PLN02954	224	phosphoserine phosphatase	98.11
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	98.1
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.0
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	97.96
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.78
COG0546	220	Gph Predicted phosphatases [General function predi	97.76
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	97.75
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	97.72
PRK13222	226	phosphoglycolate phosphatase; Provisional	97.54
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	97.5
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	97.42
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	97.38
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	97.33
PRK13288	214	pyrophosphatase PpaX; Provisional	97.29
PRK13226	229	phosphoglycolate phosphatase; Provisional	97.23
PRK13223	272	phosphoglycolate phosphatase; Provisional	97.22
PRK13225	273	phosphoglycolate phosphatase; Provisional	97.2
PRK08238	479	hypothetical protein; Validated	97.16
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	97.14
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	97.14
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	97.09
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	97.07
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	97.03
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	97.03
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	96.81
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	96.8
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	96.78
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	96.77
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	96.76
PRK06769	173	hypothetical protein; Validated	96.66
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	96.63
PHA02530	300	pseT polynucleotide kinase; Provisional	96.61
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	96.6
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	96.58
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	96.54
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	96.5
COG4359	220	Uncharacterized conserved protein [Function unknow	96.49
PRK14988	224	GMP/IMP nucleotidase; Provisional	96.39
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	96.39
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	96.37
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	96.35
PRK11587	218	putative phosphatase; Provisional	96.32
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	96.31
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	96.28
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	96.22
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	96.15
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	96.15
KOG4383|consensus	1354		96.09
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	96.05
PRK11590	211	hypothetical protein; Provisional	96.04
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	96.03
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	95.98
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	95.8
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	95.8
PLN02575	381	haloacid dehalogenase-like hydrolase	95.77
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	95.77
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	95.73
PLN02811	220	hydrolase	95.68
PRK09449	224	dUMP phosphatase; Provisional	95.64
PLN02940	382	riboflavin kinase	95.64
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	95.63
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	95.63
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	95.52
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	95.46
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	95.45
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	95.22
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	95.12
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	94.72
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	94.61
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	94.43
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	94.29
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	93.97
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	93.79
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	93.52
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	92.8
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	92.64
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	92.55
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	92.35
PRK10563	221	6-phosphogluconate phosphatase; Provisional	92.21
PHA02597	197	30.2 hypothetical protein; Provisional	92.15
COG4030	315	Uncharacterized protein conserved in archaea [Func	91.81
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	91.3
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	91.28
COG0241	181	HisB Histidinol phosphatase and related phosphatas	91.28
KOG3120|consensus	256		91.01
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	90.9
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	90.53
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	90.5
PRK01158	230	phosphoglycolate phosphatase; Provisional	90.16
PLN02645	311	phosphoglycolate phosphatase	89.78
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	89.37
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	89.11
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	88.54
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	88.36
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	88.32
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	88.12
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	87.94
PHA03398	303	viral phosphatase superfamily protein; Provisional	87.64
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	87.62
PRK10976	266	putative hydrolase; Provisional	87.54
PRK10513	270	sugar phosphate phosphatase; Provisional	87.08
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	86.54
PRK10444	248	UMP phosphatase; Provisional	86.25
PLN02887	580	hydrolase family protein	85.83
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	85.78
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	85.52
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	85.39
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	84.19
PRK10748	238	flavin mononucleotide phosphatase; Provisional	84.18
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	83.59
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	83.46
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	83.41
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	83.1
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	83.04
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	83.0
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	82.96
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	80.78
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	80.07

>KOG0202|consensus

Probab=100.00  E-value=4.8e-53  Score=404.25  Aligned_cols=248  Identities=46%  Similarity=0.635  Sum_probs=221.6

Q ss_pred             ccCCCCCCccccCChhHHHhhhhhhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhcccc
Q psy885           11 SNSNPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHA   90 (270)
Q Consensus        11 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~   90 (270)
                      +|.|.++......+..| +..|+.-+...|++++++||+|+||+|+|++.+..++.    ++.+|+|||||.|+++|+.+
T Consensus       435 eKm~l~~~~~~~~s~~~-~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~----~~~~fvKGA~E~Vl~rcs~~  509 (972)
T KOG0202|consen  435 EKMGLPGTRSTNLSNEE-ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQS----GYKMFVKGAPESVLERCSTY  509 (972)
T ss_pred             HHcCCCcchhhcccccc-cccchhHHHHhhhheeEeecccccceEEEEEecCCCCc----cceEEecCChHHHHHhhhcE
Confidence            45666666555566666 67888999999999999999999999999998776432    58999999999999999776


Q ss_pred             cc-CC-eeeeccHHHHHh--------hhccceEEEeecccccceeCC-CCcccccccccchhhcccCCeEEEEEEeecCC
Q psy885           91 RI-GS-QKVSLKDFSANT--------RFENLRSLEPKSKVSAIVPWG-MKPEDMNLADSTKFASYEVNLTFVGVVGMLDP  159 (270)
Q Consensus        91 ~~-~~-~~~~l~~~~~~~--------~~~GlRvl~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~  159 (270)
                      .. +| ...|+++..++.        +++||||||+     |+++.+ ..+..+++.+..++..+|++|+|+|++++.||
T Consensus       510 ~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLal-----A~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DP  584 (972)
T KOG0202|consen  510 YGSDGQTKVPLTQASRETILANVYEMGSEGLRVLAL-----ASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDP  584 (972)
T ss_pred             EccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEE-----EccCCcccChhhhhhcccccccccccceEEEEEeeccCC
Confidence            65 33 558998876653        8999999999     888877 45556666677788889999999999999999


Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChh
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPA  239 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~  239 (270)
                      ||++++++|+.|+++||+|+|||||+..||.+||+++||...+++..+.++||++|+.|++++++....++.+|+|++|.
T Consensus       585 PR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~  664 (972)
T KOG0202|consen  585 PRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQ  664 (972)
T ss_pred             CchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCch
Confidence            99999999999999999999999999999999999999999988888899999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          240 HKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       240 ~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +|.+||++||++|.+|+|+|||+||++||
T Consensus       665 HK~kIVeaLq~~geivAMTGDGVNDApAL  693 (972)
T KOG0202|consen  665 HKLKIVEALQSRGEVVAMTGDGVNDAPAL  693 (972)
T ss_pred             hHHHHHHHHHhcCCEEEecCCCccchhhh
Confidence            99999999999999999999999999997

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=4e-51  Score=412.88  Aligned_cols=216  Identities=32%  Similarity=0.440  Sum_probs=187.0

Q ss_pred             hhhhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeecc--------HHH
Q psy885           32 VRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLK--------DFS  103 (270)
Q Consensus        32 ~~~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~--------~~~  103 (270)
                      ....++..|++++++||||+||||+|+++...+      ++++|+|||||+|+++|+..   +...+++        +..
T Consensus       432 ~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~------~~~~~~KGApe~il~~~~~~---~~~~~~~~~~~~~~~~~~  502 (917)
T COG0474         432 DLSGLEVEYPILAEIPFDSERKRMSVIVKTDEG------KYILFVKGAPEVILERCKSI---GELEPLTEEGLRTLEEAV  502 (917)
T ss_pred             CHHHHhhhcceeEEecCCCCceEEEEEEEcCCC------cEEEEEcCChHHHHHHhccc---CcccccCHHHHHHHHHHH
Confidence            455677777889999999999999999985442      59999999999999999875   3333444        335


Q ss_pred             HHhhhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcC
Q psy885          104 ANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITG  183 (270)
Q Consensus       104 ~~~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTG  183 (270)
                      ++++++|||||++     |||.++..+....     . +.+|++|+|+|+++|+||||++++++|+.|++|||++|||||
T Consensus       503 ~~la~~glRvla~-----A~k~~~~~~~~~~-----~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG  571 (917)
T COG0474         503 KELASEGLRVLAV-----AYKKLDRAEKDDE-----V-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG  571 (917)
T ss_pred             HHHHHHHHHHHHH-----HhccCCcccccch-----h-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence            5569999999999     8886654322111     1 457999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHh
Q psy885          184 DNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGK  263 (270)
Q Consensus       184 D~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~N  263 (270)
                      ||+.||.+||++||+......  .++++|.+++.++++++.+.+.++.||||+||+||.+||+.||+.|++|+|||||+|
T Consensus       572 D~~~TA~aIa~~~Gi~~~~~~--~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvN  649 (917)
T COG0474         572 DHVETAIAIAKECGIEAEAES--ALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVN  649 (917)
T ss_pred             CCHHHHHHHHHHcCCCCCCCc--eeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCch
Confidence            999999999999998866432  569999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhc
Q psy885          264 TELRIF  269 (270)
Q Consensus       264 D~~ai~  269 (270)
                      |++||.
T Consensus       650 DapALk  655 (917)
T COG0474         650 DAPALK  655 (917)
T ss_pred             hHHHHH
Confidence            999984

>KOG0204|consensus

Probab=100.00  E-value=5.6e-48  Score=369.41  Aligned_cols=237  Identities=26%  Similarity=0.309  Sum_probs=208.3

Q ss_pred             CCccccCChhHHHhhhhhhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhcccccc-CCe
Q psy885           17 NHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI-GSQ   95 (270)
Q Consensus        17 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~-~~~   95 (270)
                      .++.+.+...-+++...+..|.+.++++.+||+|.+|||+|+++.++.      ..++|+|||+|.|+..|+.+.+ +|.
T Consensus       509 pTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~------~~y~~~KGAsEiVL~~C~~~~~~~g~  582 (1034)
T KOG0204|consen  509 PTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDG------GHYVHWKGASEIVLKSCEYYIDSNGE  582 (1034)
T ss_pred             HHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCC------CeEEEEcChHHHHHHhhhheECCCCC
Confidence            344455666666788899999999999999999999999999998763      3249999999999999999877 888


Q ss_pred             eeeccHHHHHh--------hhccceEEEeecccccceeCCCCcc-cccccccchhhcccCCeEEEEEEeecCCCchhHHH
Q psy885           96 KVSLKDFSANT--------RFENLRSLEPKSKVSAIVPWGMKPE-DMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFD  166 (270)
Q Consensus        96 ~~~l~~~~~~~--------~~~GlRvl~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~  166 (270)
                      ..+++++.+.+        +.+|||++|+     ||+++..++. +.++++.   +..+.+|+++|+++++||.||++++
T Consensus       583 ~~~~~e~~~~~~~~~Ie~mA~~~LRti~l-----Ay~df~~~~~~~~~~~~~---~~~~~~lt~laivGIkDPvRPgV~~  654 (1034)
T KOG0204|consen  583 LVPFNEDDRKSFKDVIEPMASEGLRTICL-----AYRDFVAGPDEEPSWDNE---ELPEGGLTLLAIVGIKDPVRPGVPE  654 (1034)
T ss_pred             EeeCCHHHHHHHHHHHHHHHHhhhheeeE-----EeeccccCCCCCCCcccc---ccCCCCeEEEEEeeccCCCCCCcHH
Confidence            88998775543        9999999999     9999776522 2333321   2347899999999999999999999


Q ss_pred             HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHH
Q psy885          167 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE  246 (270)
Q Consensus       167 ~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~  246 (270)
                      +|+.|+.|||.|.|+||||..||.+||.+|||+.++.+  -.+++|.+|++++++++++++++.+|+||.+|.+|+-+|+
T Consensus       655 AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk  732 (1034)
T KOG0204|consen  655 AVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVK  732 (1034)
T ss_pred             HHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHH
Confidence            99999999999999999999999999999999988764  4799999999999999999999999999999999999999


Q ss_pred             HHhhCCCEEEEECCcHhhhhhhc
Q psy885          247 FLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       247 ~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      .|+++|++||++|||+||++||-
T Consensus       733 ~L~~~g~VVAVTGDGTNDaPALk  755 (1034)
T KOG0204|consen  733 GLIKQGEVVAVTGDGTNDAPALK  755 (1034)
T ss_pred             HHHhcCcEEEEecCCCCCchhhh
Confidence            99999999999999999999973

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=100.00  E-value=3.8e-47  Score=389.63  Aligned_cols=217  Identities=23%  Similarity=0.301  Sum_probs=183.1

Q ss_pred             hcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEee
Q psy885           38 TKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPK  117 (270)
Q Consensus        38 ~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~  117 (270)
                      ..|++++++||+|++|||||+++..+++     ++++|+|||||.|+++|+..   ..+..+.+...+++++|+||||+ 
T Consensus       550 ~~~~il~~~pF~S~~krMsvvv~~~~~~-----~~~~~~KGApE~Il~~c~~~---~~p~~~~~~~~~~a~~G~RVLal-  620 (1054)
T TIGR01657       550 QELSIIRRFQFSSALQRMSVIVSTNDER-----SPDAFVKGAPETIQSLCSPE---TVPSDYQEVLKSYTREGYRVLAL-  620 (1054)
T ss_pred             ceEEEEEEEeecCCCCEEEEEEEEcCCC-----eEEEEEECCHHHHHHHcCCc---CCChhHHHHHHHHHhcCCEEEEE-
Confidence            5789999999999999999999876532     57899999999999999852   12344667778889999999999 


Q ss_pred             cccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q psy885          118 SKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG  197 (270)
Q Consensus       118 ~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~g  197 (270)
                          |||+++..... .. ....++.+|++|+|+|+++|+||+|++++++|+.|+++||+++|+||||+.||.+||++||
T Consensus       621 ----A~k~l~~~~~~-~~-~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~g  694 (1054)
T TIGR01657       621 ----AYKELPKLTLQ-KA-QDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECG  694 (1054)
T ss_pred             ----EEeecCccchh-hh-hhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence                88877532100 00 1123466899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC-------------------------------------------------ccceeeechhhcC---CCHHHHHH
Q psy885          198 VFTEEED-------------------------------------------------TTGKSYSGREFDD---LPLSEQKA  225 (270)
Q Consensus       198 i~~~~~~-------------------------------------------------~~~~~i~G~~~~~---l~~~~~~~  225 (270)
                      |++++..                                                 ...++++|+++..   +.++++.+
T Consensus       695 ii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~  774 (1054)
T TIGR01657       695 IVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLR  774 (1054)
T ss_pred             CCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHH
Confidence            9865421                                                 0136899999876   45678889


Q ss_pred             hccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          226 AVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       226 ~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      .+.++.||||++|+||.+||+.||+.|++|+|||||+||++||.
T Consensus       775 ~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK  818 (1054)
T TIGR01657       775 LLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALK  818 (1054)
T ss_pred             HHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH
Confidence            99999999999999999999999999999999999999999984

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=100.00  E-value=7.5e-46  Score=378.28  Aligned_cols=222  Identities=25%  Similarity=0.381  Sum_probs=183.7

Q ss_pred             hcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhcccccc-CC-eeeeccHH--------HHHhh
Q psy885           38 TKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI-GS-QKVSLKDF--------SANTR  107 (270)
Q Consensus        38 ~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~-~~-~~~~l~~~--------~~~~~  107 (270)
                      ..|++++++||||+||||+|+++.++++     .+++|+|||||.|+++|+.... ++ ...++++.        ..+++
T Consensus       523 ~~~~~~~~~pFds~rK~msvv~~~~~~~-----~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a  597 (1053)
T TIGR01523       523 AQFEFIAEFPFDSEIKRMASIYEDNHGE-----TYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLA  597 (1053)
T ss_pred             cccceEEEeccCCCCCeEEEEEEeCCCC-----EEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHH
Confidence            3588999999999999999999865321     4789999999999999987543 22 34566544        33459


Q ss_pred             hccceEEEeecccccceeCCCCcccc-cccc-cchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCC
Q psy885          108 FENLRSLEPKSKVSAIVPWGMKPEDM-NLAD-STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN  185 (270)
Q Consensus       108 ~~GlRvl~~~~~~~a~~~~~~~~~~~-~~~~-~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~  185 (270)
                      ++|+||||+     |||+++..+... ...+ ...++.+|++|+|+|+++|+||+|++++++|+.|+++||+++|+|||+
T Consensus       598 ~~GlRvLa~-----A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~  672 (1053)
T TIGR01523       598 AEGLRVLAF-----ASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDF  672 (1053)
T ss_pred             hcCCeEEEE-----EEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCC
Confidence            999999999     777765421100 0000 012345789999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCC------CccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEEC
Q psy885          186 KATAEAICRRIGVFTEEE------DTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDS  259 (270)
Q Consensus       186 ~~ta~~iA~~~gi~~~~~------~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miG  259 (270)
                      +.||.+||+++||...+.      .....+++|.+++.++++++++.+.++.||||++|+||.+||+.||++|++|+|+|
T Consensus       673 ~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~G  752 (1053)
T TIGR01523       673 PETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTG  752 (1053)
T ss_pred             HHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeC
Confidence            999999999999985421      11247999999999999999999999999999999999999999999999999999


Q ss_pred             CcHhhhhhhc
Q psy885          260 STGKTELRIF  269 (270)
Q Consensus       260 DG~ND~~ai~  269 (270)
                      ||+||++||.
T Consensus       753 DGvNDapaLk  762 (1053)
T TIGR01523       753 DGVNDSPSLK  762 (1053)
T ss_pred             CCcchHHHHH
Confidence            9999999984

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>KOG0208|consensus

Probab=100.00  E-value=1.3e-45  Score=357.31  Aligned_cols=215  Identities=20%  Similarity=0.281  Sum_probs=186.3

Q ss_pred             cceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeec
Q psy885           39 KWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKS  118 (270)
Q Consensus        39 ~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~  118 (270)
                      .+-+++.+||+|..|||||||..++.+     +..+|+|||||.|.++|++...   +..+.+.++.|+.+||||||+  
T Consensus       600 ~~si~k~feF~S~LrRMSVIv~~~~e~-----~~~~ftKGaPE~I~~ic~p~tv---P~dy~evl~~Yt~~GfRVIAl--  669 (1140)
T KOG0208|consen  600 EISIVKQFEFSSALRRMSVIVSTGGED-----KMMVFTKGAPESIAEICKPETV---PADYQEVLKEYTHQGFRVIAL--  669 (1140)
T ss_pred             ceEEEEecccchhhheEEEEEecCCCC-----ceEeeccCCHHHHHHhcCcccC---CccHHHHHHHHHhCCeEEEEE--
Confidence            789999999999999999999998765     7999999999999999987433   344667889999999999999  


Q ss_pred             ccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q psy885          119 KVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV  198 (270)
Q Consensus       119 ~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi  198 (270)
                         |+|+++.. + ........++.+|++|.|+|++.|++++|++++.+|++|++|+||++|+||||..||+.+||+|||
T Consensus       670 ---A~K~L~~~-~-~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgm  744 (1140)
T KOG0208|consen  670 ---ASKELETS-T-LQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGM  744 (1140)
T ss_pred             ---ecCccCcc-h-HHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccc
Confidence               77777644 1 111123356788999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCc---------------------------------------------------cceeeechhhcCC---CHHHHH
Q psy885          199 FTEEEDT---------------------------------------------------TGKSYSGREFDDL---PLSEQK  224 (270)
Q Consensus       199 ~~~~~~~---------------------------------------------------~~~~i~G~~~~~l---~~~~~~  224 (270)
                      +.+....                                                   ..++++|+.|.-+   ..+.+.
T Consensus       745 i~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~  824 (1140)
T KOG0208|consen  745 IEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVP  824 (1140)
T ss_pred             cCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHH
Confidence            9765320                                                   1357888888754   456778


Q ss_pred             HhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          225 AAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       225 ~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +++.++.|||||+|.||.++|+.||+.|+.|+|||||+||++||
T Consensus       825 ~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgAL  868 (1140)
T KOG0208|consen  825 KILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGAL  868 (1140)
T ss_pred             HHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhh
Confidence            88999999999999999999999999999999999999999997

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=100.00  E-value=1.5e-44  Score=366.08  Aligned_cols=222  Identities=55%  Similarity=0.794  Sum_probs=190.4

Q ss_pred             hhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhcccccc-CCeeeeccHHH--------HHh
Q psy885           36 VETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI-GSQKVSLKDFS--------ANT  106 (270)
Q Consensus        36 ~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~-~~~~~~l~~~~--------~~~  106 (270)
                      .++.|++++++||||+||||+|+++.++       ++++|+|||||.|+++|+.+.. ++...|+++..        .++
T Consensus       416 ~~~~~~~~~~~pF~s~rK~msviv~~~~-------~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~  488 (917)
T TIGR01116       416 WNDKFKKLATLEFSRDRKSMSVLCKPST-------GNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEM  488 (917)
T ss_pred             HHhhcceeeecccChhhCeEEEEEeeCC-------cEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHH
Confidence            4567889999999999999999998653       6899999999999999998655 36667777653        344


Q ss_pred             hh-ccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCC
Q psy885          107 RF-ENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN  185 (270)
Q Consensus       107 ~~-~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~  185 (270)
                      ++ +|+|||++     |||.++.........+...++.+|++|+|+|+++++||+|++++++|+.|+++||+++|+|||+
T Consensus       489 a~~~GlRvl~~-----A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~  563 (917)
T TIGR01116       489 GTTKALRCLAL-----AFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDN  563 (917)
T ss_pred             HhhcCCeEEEE-----EEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCC
Confidence            88 99999999     8887754321111111223456799999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhh
Q psy885          186 KATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTE  265 (270)
Q Consensus       186 ~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~  265 (270)
                      ..||.++|+++|+..++......+++|.++..+.++++.+...+..||||++|+||.++|+.+|+.|++|+|+|||+||+
T Consensus       564 ~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~  643 (917)
T TIGR01116       564 KETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDA  643 (917)
T ss_pred             HHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchH
Confidence            99999999999998765544456899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhc
Q psy885          266 LRIF  269 (270)
Q Consensus       266 ~ai~  269 (270)
                      +||.
T Consensus       644 ~alk  647 (917)
T TIGR01116       644 PALK  647 (917)
T ss_pred             HHHH
Confidence            9984

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=100.00  E-value=2.2e-44  Score=363.13  Aligned_cols=210  Identities=24%  Similarity=0.427  Sum_probs=183.4

Q ss_pred             hhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHH--------HHhh
Q psy885           36 VETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFS--------ANTR  107 (270)
Q Consensus        36 ~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~--------~~~~  107 (270)
                      ....|+.+.++||||.+|||+++++..++      .+++|+|||||.|+++|+.+..++...++++..        .+++
T Consensus       437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~------~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a  510 (902)
T PRK10517        437 LASRWQKIDEIPFDFERRRMSVVVAENTE------HHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLN  510 (902)
T ss_pred             hhhcCceEEEeeeCCCcceEEEEEEECCC------eEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHH
Confidence            45689999999999999999999876542      578999999999999999877677767776553        3448


Q ss_pred             hccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHH
Q psy885          108 FENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKA  187 (270)
Q Consensus       108 ~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~  187 (270)
                      .+|+||+++     ||++++..+....       ...|++++|+|+++|.||+|++++++|+.|+++||+++|+||||+.
T Consensus       511 ~~G~rvlav-----A~k~~~~~~~~~~-------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~  578 (902)
T PRK10517        511 RQGLRVVAV-----ATKYLPAREGDYQ-------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSEL  578 (902)
T ss_pred             hcCCEEEEE-----EEecCCccccccc-------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHH
Confidence            899999999     8877654321110       1126799999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          188 TAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       188 ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      ||.+||+++||..      ..+++|.+++.|+++++.+.++++.||||++|+||.+||+.||++|++|+|+|||+||++|
T Consensus       579 tA~~IA~~lGI~~------~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPA  652 (902)
T PRK10517        579 VAAKVCHEVGLDA------GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPA  652 (902)
T ss_pred             HHHHHHHHcCCCc------cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHH
Confidence            9999999999952      2489999999999999999999999999999999999999999999999999999999999


Q ss_pred             hc
Q psy885          268 IF  269 (270)
Q Consensus       268 i~  269 (270)
                      |.
T Consensus       653 Lk  654 (902)
T PRK10517        653 LR  654 (902)
T ss_pred             HH
Confidence            84

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=100.00  E-value=2.8e-44  Score=365.18  Aligned_cols=213  Identities=28%  Similarity=0.376  Sum_probs=183.3

Q ss_pred             hhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccc-cCCeeeeccH-------HHHHh
Q psy885           35 DVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHAR-IGSQKVSLKD-------FSANT  106 (270)
Q Consensus        35 ~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~-~~~~~~~l~~-------~~~~~  106 (270)
                      ..+..|++++.+||+|.+|||+|+++.++.      ++++|+|||||.|+++|+.+. .++...++++       ...++
T Consensus       465 ~~~~~~~~~~~~pF~s~~k~msvv~~~~~~------~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~  538 (941)
T TIGR01517       465 EVRAEEKVVKIYPFNSERKFMSVVVKHSGG------KVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPL  538 (941)
T ss_pred             HHHhhchhccccccCCCCCeEEEEEEeCCC------cEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHH
Confidence            345678899999999999999999986542      589999999999999998753 3454445543       33456


Q ss_pred             hhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCH
Q psy885          107 RFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK  186 (270)
Q Consensus       107 ~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~  186 (270)
                      +.+|+||+++     ||++++..+..       ..+..|++|+|+|+++|+||+|++++++|+.|+++||+++|+|||++
T Consensus       539 a~~G~Rvl~~-----A~~~~~~~~~~-------~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~  606 (941)
T TIGR01517       539 ASDALRTICL-----AYRDFAPEEFP-------RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNI  606 (941)
T ss_pred             HhcCCEEEEE-----EEEecCccccc-------cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCCh
Confidence            8999999999     77776543211       01223789999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhh
Q psy885          187 ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTEL  266 (270)
Q Consensus       187 ~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~  266 (270)
                      .||.+||++|||.+++.    .+++|.+++.++++++++.+.++.||||++|+||.+||+.||++|++|+|||||+||++
T Consensus       607 ~tA~~iA~~~GI~~~~~----~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDap  682 (941)
T TIGR01517       607 DTAKAIARNCGILTFGG----LAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAP  682 (941)
T ss_pred             HHHHHHHHHcCCCCCCc----eEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHH
Confidence            99999999999986543    58999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhc
Q psy885          267 RIF  269 (270)
Q Consensus       267 ai~  269 (270)
                      ||.
T Consensus       683 ALk  685 (941)
T TIGR01517       683 ALK  685 (941)
T ss_pred             HHH
Confidence            984

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=100.00  E-value=6.1e-44  Score=360.26  Aligned_cols=212  Identities=24%  Similarity=0.319  Sum_probs=182.9

Q ss_pred             hhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHH--------HHHhh
Q psy885           36 VETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDF--------SANTR  107 (270)
Q Consensus        36 ~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~--------~~~~~  107 (270)
                      .+..|+.+.++||++.+|+|+++++..++      ++++|+|||||.|+++|+....++...++++.        ..+++
T Consensus       435 ~~~~~~~~~~~pF~s~~k~ms~v~~~~~~------~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a  508 (903)
T PRK15122        435 KPAGYRKVDELPFDFVRRRLSVVVEDAQG------QHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYN  508 (903)
T ss_pred             hhhcCceEEEeeeCCCcCEEEEEEEcCCC------cEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHH
Confidence            34578999999999999999999876432      68899999999999999987666666677654        23458


Q ss_pred             hccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHH
Q psy885          108 FENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKA  187 (270)
Q Consensus       108 ~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~  187 (270)
                      .+|+||+++     ||++++..+....     ..+..|++++|+|+++|.||+|++++++|+.|+++||+++|+||||+.
T Consensus       509 ~~G~rvlav-----A~k~~~~~~~~~~-----~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~  578 (903)
T PRK15122        509 ADGFRVLLV-----ATREIPGGESRAQ-----YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPI  578 (903)
T ss_pred             hCCCEEEEE-----EEeccCccccccc-----cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHH
Confidence            899999999     8877654321100     112247899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          188 TAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       188 ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      ||.+||+++||..      ..+++|.+++.|+++++.+.+.++.||||++|+||.+||+.||++|++|+|+|||+||++|
T Consensus       579 tA~aIA~~lGI~~------~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPA  652 (903)
T PRK15122        579 VTAKICREVGLEP------GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPA  652 (903)
T ss_pred             HHHHHHHHcCCCC------CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHH
Confidence            9999999999953      2489999999999999999999999999999999999999999999999999999999999


Q ss_pred             hc
Q psy885          268 IF  269 (270)
Q Consensus       268 i~  269 (270)
                      |.
T Consensus       653 Lk  654 (903)
T PRK15122        653 LR  654 (903)
T ss_pred             HH
Confidence            84

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=100.00  E-value=4.7e-44  Score=364.92  Aligned_cols=228  Identities=26%  Similarity=0.362  Sum_probs=186.9

Q ss_pred             hhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHH--------HH
Q psy885           34 QDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFS--------AN  105 (270)
Q Consensus        34 ~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~--------~~  105 (270)
                      ...+..|++++.+||+|+||||+++++..+.+  ++ ++++|+|||||.|+++|+.+..++...++++..        .+
T Consensus       442 ~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~--~~-~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~  518 (997)
T TIGR01106       442 MEMRERNPKVVEIPFNSTNKYQLSIHENEDPR--DP-RHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLE  518 (997)
T ss_pred             HHHHhhCceeEEeccCCCCceEEEEEeccCCC--Cc-eEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHH
Confidence            34678899999999999999999988643211  01 588999999999999999877777777776653        33


Q ss_pred             hhhccceEEEeecccccceeCCCCccccccc-ccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCC
Q psy885          106 TRFENLRSLEPKSKVSAIVPWGMKPEDMNLA-DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD  184 (270)
Q Consensus       106 ~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD  184 (270)
                      ++++|+||||+     ||++++..+....+. +....+.+|++|+|+|+++++||||++++++|+.|+++||+++|+|||
T Consensus       519 ~a~~GlRvla~-----A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd  593 (997)
T TIGR01106       519 LGGLGERVLGF-----CHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGD  593 (997)
T ss_pred             HHhcCCEEEEE-----EEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCC
Confidence            58999999999     777765421111000 001112348899999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHhCCCCCCCC--------------------ccceeeechhhcCCCHHHHHHhccCc--eEEEecChhhHH
Q psy885          185 NKATAEAICRRIGVFTEEED--------------------TTGKSYSGREFDDLPLSEQKAAVARA--RLFSRVEPAHKS  242 (270)
Q Consensus       185 ~~~ta~~iA~~~gi~~~~~~--------------------~~~~~i~G~~~~~l~~~~~~~~~~~~--~v~ar~tP~~K~  242 (270)
                      +..||.++|+++||..++..                    ....+++|.+++.++++++++.+.++  .||||++|+||+
T Consensus       594 ~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~  673 (997)
T TIGR01106       594 HPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKL  673 (997)
T ss_pred             CHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHH
Confidence            99999999999999865321                    11369999999999999999998765  499999999999


Q ss_pred             HHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          243 KIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       243 ~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      +||+.||+.|++|+|+|||+||++||.
T Consensus       674 ~IV~~lq~~g~vv~~~GDG~ND~paLk  700 (997)
T TIGR01106       674 IIVEGCQRQGAIVAVTGDGVNDSPALK  700 (997)
T ss_pred             HHHHHHHHCCCEEEEECCCcccHHHHh
Confidence            999999999999999999999999984

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PLN03190 aminophospholipid translocase; Provisional

Probab=100.00  E-value=2.5e-44  Score=368.92  Aligned_cols=224  Identities=21%  Similarity=0.198  Sum_probs=179.6

Q ss_pred             hhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEE
Q psy885           35 DVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSL  114 (270)
Q Consensus        35 ~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl  114 (270)
                      ..+..|++++++||+|+|||||||++.+++      ++++|+|||||+|+++|+.....+....+.+...+++.+|+|||
T Consensus       598 ~~~~~~~il~~~pF~S~rKrMSvIv~~~~~------~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL  671 (1178)
T PLN03190        598 GERQRFNVLGLHEFDSDRKRMSVILGCPDK------TVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTL  671 (1178)
T ss_pred             cceecceeEEEecccccccEEEEEEEcCCC------cEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceE
Confidence            356789999999999999999999987642      68999999999999999864333333334566778899999999


Q ss_pred             EeecccccceeCCCCccc-----c-----ccccc-----chhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEE
Q psy885          115 EPKSKVSAIVPWGMKPED-----M-----NLADS-----TKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVI  179 (270)
Q Consensus       115 ~~~~~~~a~~~~~~~~~~-----~-----~~~~~-----~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~  179 (270)
                      ++     |||+++..+..     .     ...+.     ...+.+|++|+|+|+++++||||++++++|+.|+++||++|
T Consensus       672 ~l-----A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~  746 (1178)
T PLN03190        672 VV-----GMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVW  746 (1178)
T ss_pred             EE-----EEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence            99     66666432110     0     00010     12246799999999999999999999999999999999999


Q ss_pred             EEcCCCHHHHHHHHHHhCCCCCCCC---------------------------------------------ccceeeechh
Q psy885          180 VITGDNKATAEAICRRIGVFTEEED---------------------------------------------TTGKSYSGRE  214 (270)
Q Consensus       180 mlTGD~~~ta~~iA~~~gi~~~~~~---------------------------------------------~~~~~i~G~~  214 (270)
                      |+|||+.+||.+||++|||++++..                                             ...++++|.+
T Consensus       747 mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~  826 (1178)
T PLN03190        747 VLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTS  826 (1178)
T ss_pred             EECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHH
Confidence            9999999999999999999866421                                             0136899999


Q ss_pred             hcCCCH----HHHHHhccC--ceEEEecChhhHHHHHHHHhhC-CCEEEEECCcHhhhhhhc
Q psy885          215 FDDLPL----SEQKAAVAR--ARLFSRVEPAHKSKIVEFLQGM-NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       215 ~~~l~~----~~~~~~~~~--~~v~ar~tP~~K~~iV~~lq~~-g~~V~miGDG~ND~~ai~  269 (270)
                      +..+.+    +++.++..+  ++||||+||.||++||+.+|+. +++|+|||||+||++||.
T Consensus       827 L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq  888 (1178)
T PLN03190        827 LVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQ  888 (1178)
T ss_pred             HHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHH
Confidence            988765    345555554  4589999999999999999997 589999999999999984

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=100.00  E-value=3.1e-43  Score=354.41  Aligned_cols=210  Identities=26%  Similarity=0.436  Sum_probs=182.6

Q ss_pred             hhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHH--------HHhh
Q psy885           36 VETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFS--------ANTR  107 (270)
Q Consensus        36 ~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~--------~~~~  107 (270)
                      .+..|+.++.+||||.+|+|+++++..+.      .+++|+|||||.|+++|+.+..++...+++++.        .+++
T Consensus       402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~------~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a  475 (867)
T TIGR01524       402 TASRWKKVDEIPFDFDRRRLSVVVENRAE------VTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMN  475 (867)
T ss_pred             HhhcCceEEEeccCCCcCEEEEEEEcCCc------eEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHH
Confidence            45688999999999999999999876542      478999999999999999876676666665442        3348


Q ss_pred             hccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHH
Q psy885          108 FENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKA  187 (270)
Q Consensus       108 ~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~  187 (270)
                      .+|+||+++     ||++++..+...  .     +..+++|+|+|+++|+||+|++++++|+.|+++||+++|+|||+..
T Consensus       476 ~~G~rvlav-----A~~~~~~~~~~~--~-----~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~  543 (867)
T TIGR01524       476 RQGIRVIAV-----ATKTLKVGEADF--T-----KTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEI  543 (867)
T ss_pred             hcCCEEEEE-----EEeccCcccccc--c-----ccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHH
Confidence            899999999     887765432211  0     1136789999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          188 TAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       188 ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      ||.+||+++||...      .+++|.+++.++++++.+.++++.||||++|+||.+||+.||++|++|+|+|||+||++|
T Consensus       544 tA~aIA~~lGI~~~------~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapA  617 (867)
T TIGR01524       544 VTARICQEVGIDAN------DFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPA  617 (867)
T ss_pred             HHHHHHHHcCCCCC------CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHH
Confidence            99999999999632      489999999999999999999999999999999999999999999999999999999999


Q ss_pred             hc
Q psy885          268 IF  269 (270)
Q Consensus       268 i~  269 (270)
                      |.
T Consensus       618 Lk  619 (867)
T TIGR01524       618 LR  619 (867)
T ss_pred             HH
Confidence            84

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=100.00  E-value=2.7e-44  Score=369.12  Aligned_cols=220  Identities=23%  Similarity=0.252  Sum_probs=175.5

Q ss_pred             hcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEee
Q psy885           38 TKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPK  117 (270)
Q Consensus        38 ~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~  117 (270)
                      ..|++++++||+|+||||||+++.+++      ++++|+|||||+|+++|+.. .+.....+.+...+++.+|+|||++ 
T Consensus       507 ~~~~il~~~pF~s~rKrmSviv~~~~~------~~~l~~KGA~e~il~~~~~~-~~~~~~~~~~~~~~~a~~GlRtL~~-  578 (1057)
T TIGR01652       507 KEYEILNVLEFNSDRKRMSVIVRNPDG------RIKLLCKGADTVIFKRLSSG-GNQVNEETKEHLENYASEGLRTLCI-  578 (1057)
T ss_pred             EEEEEEEecccCCCCCeEEEEEEeCCC------eEEEEEeCcHHHHHHHhhcc-chhHHHHHHHHHHHHHHcCCcEEEE-
Confidence            579999999999999999999997652      68999999999999999752 1111223455567779999999999 


Q ss_pred             cccccceeCCCCccc----------ccccc-----cchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEc
Q psy885          118 SKVSAIVPWGMKPED----------MNLAD-----STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVIT  182 (270)
Q Consensus       118 ~~~~a~~~~~~~~~~----------~~~~~-----~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlT  182 (270)
                          |||+++..+..          ....+     ...++.+|++|+|+|+++++||||++++++|+.|++|||++||+|
T Consensus       579 ----A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlT  654 (1057)
T TIGR01652       579 ----AYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLT  654 (1057)
T ss_pred             ----EEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEc
Confidence                77666532110          00001     011346799999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhCCCCCCCCc-------------------------------------cceeeechhhcCCCHHH---
Q psy885          183 GDNKATAEAICRRIGVFTEEEDT-------------------------------------TGKSYSGREFDDLPLSE---  222 (270)
Q Consensus       183 GD~~~ta~~iA~~~gi~~~~~~~-------------------------------------~~~~i~G~~~~~l~~~~---  222 (270)
                      ||+.+||.+||++|||++++...                                     ..++++|++++.+.+++   
T Consensus       655 GD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~  734 (1057)
T TIGR01652       655 GDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEK  734 (1057)
T ss_pred             CCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHH
Confidence            99999999999999999765321                                     12589999988655433   


Q ss_pred             -HHHhccC--ceEEEecChhhHHHHHHHHhhC-CCEEEEECCcHhhhhhhc
Q psy885          223 -QKAAVAR--ARLFSRVEPAHKSKIVEFLQGM-NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       223 -~~~~~~~--~~v~ar~tP~~K~~iV~~lq~~-g~~V~miGDG~ND~~ai~  269 (270)
                       +.+++..  ..||||++|+||.+||+.+|+. |++|+|||||+||++||.
T Consensus       735 ~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk  785 (1057)
T TIGR01652       735 EFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQ  785 (1057)
T ss_pred             HHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHh
Confidence             3445444  4699999999999999999998 999999999999999984

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=100.00  E-value=2.4e-40  Score=334.70  Aligned_cols=202  Identities=31%  Similarity=0.469  Sum_probs=179.3

Q ss_pred             hhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhcccccc-CCeeeeccHHH--------HHh
Q psy885           36 VETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI-GSQKVSLKDFS--------ANT  106 (270)
Q Consensus        36 ~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~-~~~~~~l~~~~--------~~~  106 (270)
                      .+..|+.++++||+|.+|||+++++...++     ++++|+|||||.|+.+|+.+.. ++...++++..        .++
T Consensus       424 ~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~-----~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~  498 (884)
T TIGR01522       424 LRETYIRVAEVPFSSERKWMAVKCVHRQDR-----SEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEM  498 (884)
T ss_pred             HHhhCcEEeEeCCCCCCCeEEEEEEEcCCC-----eEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHH
Confidence            455789999999999999999998764322     6899999999999999987654 45556665432        345


Q ss_pred             hhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCH
Q psy885          107 RFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK  186 (270)
Q Consensus       107 ~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~  186 (270)
                      +.+|+||+++     ||+++                  +.+|+|+|+++|+||+|++++++|+.|+++||+++|+|||+.
T Consensus       499 a~~G~rvl~~-----A~~~~------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~  555 (884)
T TIGR01522       499 ASAGLRVIAF-----ASGPE------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQ  555 (884)
T ss_pred             HhcCCEEEEE-----EEEcC------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCH
Confidence            8899999999     88764                  357999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhh
Q psy885          187 ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTEL  266 (270)
Q Consensus       187 ~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~  266 (270)
                      .||.++|+++||.....    .+++|.+++.+.++++++.+.++.||||++|+||..+|+.||+.|++|+|||||+||++
T Consensus       556 ~tA~~ia~~~Gi~~~~~----~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~p  631 (884)
T TIGR01522       556 ETAVSIARRLGMPSKTS----QSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAP  631 (884)
T ss_pred             HHHHHHHHHcCCCCCCC----ceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHH
Confidence            99999999999986432    47899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhc
Q psy885          267 RIF  269 (270)
Q Consensus       267 ai~  269 (270)
                      ||.
T Consensus       632 Al~  634 (884)
T TIGR01522       632 ALK  634 (884)
T ss_pred             HHH
Confidence            984

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=100.00  E-value=4.4e-40  Score=327.59  Aligned_cols=203  Identities=26%  Similarity=0.345  Sum_probs=171.0

Q ss_pred             hhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEE
Q psy885           36 VETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLE  115 (270)
Q Consensus        36 ~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~  115 (270)
                      .+..|+++..+||++.+|+|+++++....+     +.++|+|||||.|+++|+...  .....+.+...+++.+|+|+++
T Consensus       349 ~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g-----~~~~~~kGa~e~il~~c~~~~--~~~~~~~~~~~~~~~~G~rvl~  421 (755)
T TIGR01647       349 ARDGYKVLEFVPFDPVDKRTEATVEDPETG-----KRFKVTKGAPQVILDLCDNKK--EIEEKVEEKVDELASRGYRALG  421 (755)
T ss_pred             HHhcCceEEEeccCCCCCeEEEEEEeCCCc-----eEEEEEeCChHHHHHhcCCcH--HHHHHHHHHHHHHHhCCCEEEE
Confidence            356789999999999999999998765322     578899999999999997531  1112234455667899999999


Q ss_pred             eecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q psy885          116 PKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR  195 (270)
Q Consensus       116 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~  195 (270)
                      +     ||++.                  +++|+|+|+++|.||+|++++++|+.|+++||+++|+|||++.||.+||++
T Consensus       422 v-----A~~~~------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~  478 (755)
T TIGR01647       422 V-----ARTDE------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR  478 (755)
T ss_pred             E-----EEEcC------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence            9     87621                  568999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          196 IGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       196 ~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      +||.... .....+.+|.+++.++++++++.+.++.+|||++|+||.+||+.||++|++|+|+|||+||++||.
T Consensus       479 lGI~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~  551 (755)
T TIGR01647       479 LGLGTNI-YTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALK  551 (755)
T ss_pred             cCCCCCC-cCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHH
Confidence            9997421 111224556666788999999999999999999999999999999999999999999999999984

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>KOG0206|consensus

Probab=100.00  E-value=2.7e-41  Score=338.92  Aligned_cols=244  Identities=20%  Similarity=0.244  Sum_probs=189.3

Q ss_pred             CccccCChhHHHhhh--------------------hhhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEe
Q psy885           18 HCVSFSGRREQAIAV--------------------RQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVK   77 (270)
Q Consensus        18 ~~~~~~~~~e~~~~~--------------------~~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~K   77 (270)
                      ....+.+|+|.+...                    .-...+.|++++.++|+|.||||||||+.+.+      +.++|||
T Consensus       487 ~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g------~i~LycK  560 (1151)
T KOG0206|consen  487 LSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDG------RILLYCK  560 (1151)
T ss_pred             eeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCC------cEEEEEc
Confidence            345667788777655                    11135699999999999999999999999875      7999999


Q ss_pred             CChHHHHHhccccccCCeee-eccHHHHHhhhccceEEEeecccccceeCCCCcc-----cccccc-----cchhhcccC
Q psy885           78 GAPEGVLERCTHARIGSQKV-SLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPE-----DMNLAD-----STKFASYEV  146 (270)
Q Consensus        78 GApe~Il~~c~~~~~~~~~~-~l~~~~~~~~~~GlRvl~~~~~~~a~~~~~~~~~-----~~~~~~-----~~~~~~ie~  146 (270)
                      ||+.+|+++|+..  ..... .-...+.+++.+|||+||+|+|.++..++..|..     .....+     ...++.+|+
T Consensus       561 GADsvI~erL~~~--~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk  638 (1151)
T KOG0206|consen  561 GADSVIFERLSKN--GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEK  638 (1151)
T ss_pred             CcchhhHhhhhhc--chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHh
Confidence            9999999999851  11111 1224567789999999999444443333333311     111111     123567899


Q ss_pred             CeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------
Q psy885          147 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED----------------------  204 (270)
Q Consensus       147 ~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~----------------------  204 (270)
                      ||+++|..+++|+|+++++++|+.|++||||+||+|||..+||++||.+|+++.++..                      
T Consensus       639 ~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~  718 (1151)
T KOG0206|consen  639 DLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALK  718 (1151)
T ss_pred             cchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHH
Confidence            9999999999999999999999999999999999999999999999999999976422                      


Q ss_pred             ---------------------ccceeeechhhcCCCHHHHH-H-----hccCceEEEecChhhHHHHHHHHhh-CCCEEE
Q psy885          205 ---------------------TTGKSYSGREFDDLPLSEQK-A-----AVARARLFSRVEPAHKSKIVEFLQG-MNEISA  256 (270)
Q Consensus       205 ---------------------~~~~~i~G~~~~~l~~~~~~-~-----~~~~~~v~ar~tP~~K~~iV~~lq~-~g~~V~  256 (270)
                                           ..+++|+|+.+....+.+.. .     ..+++++|||+||.||+.+|+..++ .+.+++
T Consensus       719 ~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TL  798 (1151)
T KOG0206|consen  719 ETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTL  798 (1151)
T ss_pred             HHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEE
Confidence                                 13578999988765444222 2     2367899999999999999999974 589999


Q ss_pred             EECCcHhhhhhhc
Q psy885          257 MDSSTGKTELRIF  269 (270)
Q Consensus       257 miGDG~ND~~ai~  269 (270)
                      +||||+||+.||.
T Consensus       799 AIGDGANDVsMIQ  811 (1151)
T KOG0206|consen  799 AIGDGANDVSMIQ  811 (1151)
T ss_pred             EeeCCCccchhee
Confidence            9999999999984

>KOG0203|consensus

Probab=100.00  E-value=2.1e-39  Score=310.37  Aligned_cols=237  Identities=26%  Similarity=0.365  Sum_probs=195.8

Q ss_pred             CChhHHHhhhhhhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHH
Q psy885           23 SGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDF  102 (270)
Q Consensus        23 ~~~~e~~~~~~~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~  102 (270)
                      +..+|-..-....+|++++++.++||+|.+|+...+.+..+.+   +.++.+.+|||||.|+++|+.+..+|+..|+++.
T Consensus       453 lk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~---~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~  529 (1019)
T KOG0203|consen  453 LKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPS---DPRFLLVMKGAPERILDRCSTILINGEEKPLDEK  529 (1019)
T ss_pred             HHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCC---CccceeeecCChHHHHhhccceeecCCCCCcCHH
Confidence            3344444444589999999999999999999999998776532   2278899999999999999999999999999887


Q ss_pred             HHHh--------hhccceEEEeecccccceeCCCCccccccc---ccchhhcccCCeEEEEEEeecCCCchhHHHHHHHH
Q psy885          103 SANT--------RFENLRSLEPKSKVSAIVPWGMKPEDMNLA---DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARC  171 (270)
Q Consensus       103 ~~~~--------~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l  171 (270)
                      .++.        ...|-||++|     +++.++.......+.   +..++  --.+|.|+|++++-||||..+++++..|
T Consensus       530 ~~~~f~~ay~~lg~~GerVlgF-----~~~~l~~~~~p~~~~f~~d~~n~--p~~nl~FlGl~s~idPPR~~vP~Av~~C  602 (1019)
T KOG0203|consen  530 LKEAFQEAYLELGGLGERVLGF-----CDLELPDEKFPRGFQFDTDDVNF--PTDNLRFLGLISMIDPPRAAVPDAVGKC  602 (1019)
T ss_pred             HHHHHHHHHHHhhhcchHHHHH-----HHHhcchhcCCCceEeecCCCCC--cchhccccchhhccCCCcccCchhhhhh
Confidence            6543        7889999999     555555321111111   11111  1468999999999999999999999999


Q ss_pred             HhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCc--------------------cceeeechhhcCCCHHHHHHhccC--
Q psy885          172 RAAGIRVIVITGDNKATAEAICRRIGVFTEEEDT--------------------TGKSYSGREFDDLPLSEQKAAVAR--  229 (270)
Q Consensus       172 ~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~--------------------~~~~i~G~~~~~l~~~~~~~~~~~--  229 (270)
                      +.|||+|+|+|||++.||.++|++.||......+                    ...|++|.++..++.+++++++.+  
T Consensus       603 rsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~  682 (1019)
T KOG0203|consen  603 RSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQ  682 (1019)
T ss_pred             hhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCC
Confidence            9999999999999999999999999988754431                    235899999999999999999864  


Q ss_pred             ceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          230 ARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       230 ~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      -.||||.||+||+.||+.+|++|.+|+++|||+||++||.
T Consensus       683 eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALK  722 (1019)
T KOG0203|consen  683 EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALK  722 (1019)
T ss_pred             ceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhc
Confidence            4799999999999999999999999999999999999984

>KOG0209|consensus

Probab=100.00  E-value=3.6e-39  Score=307.59  Aligned_cols=216  Identities=22%  Similarity=0.255  Sum_probs=181.2

Q ss_pred             cceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeec
Q psy885           39 KWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKS  118 (270)
Q Consensus        39 ~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~  118 (270)
                      ..+|.+++.|+|..|||||++...+.++.  .++++.+|||||+|.++....     +..+++.+.+++++|.||||+  
T Consensus       569 ~lkI~~ryhFsSaLKRmsvva~~~~~g~s--~k~~~aVKGAPEvi~~ml~dv-----P~dY~~iYk~ytR~GsRVLAL--  639 (1160)
T KOG0209|consen  569 KLKIIQRYHFSSALKRMSVVASHQGPGSS--EKYFVAVKGAPEVIQEMLRDV-----PKDYDEIYKRYTRQGSRVLAL--  639 (1160)
T ss_pred             ccchhhhhhHHHHHHHHHhhhhcccCCCc--eEEEEEecCCHHHHHHHHHhC-----chhHHHHHHHHhhccceEEEE--
Confidence            46778999999999999999877654321  279999999999999988654     444777788999999999999  


Q ss_pred             ccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q psy885          119 KVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV  198 (270)
Q Consensus       119 ~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi  198 (270)
                         +||+++.-...  -...-.++.+|++|+|.|++.|..|+|++++.+|+.|++++++++||||||+.||.++|+++||
T Consensus       640 ---g~K~l~~~~~~--q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~i  714 (1160)
T KOG0209|consen  640 ---GYKPLGDMMVS--QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGI  714 (1160)
T ss_pred             ---ecccccccchh--hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeee
Confidence               77776521111  0112356788999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCC-------------------------------------ccceeeechhhcCCCHH-HHHHhccCceEEEecChhh
Q psy885          199 FTEEED-------------------------------------TTGKSYSGREFDDLPLS-EQKAAVARARLFSRVEPAH  240 (270)
Q Consensus       199 ~~~~~~-------------------------------------~~~~~i~G~~~~~l~~~-~~~~~~~~~~v~ar~tP~~  240 (270)
                      ......                                     ...++++|..++.+... .+.+++.++.||||+.|.|
T Consensus       715 v~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~Q  794 (1160)
T KOG0209|consen  715 VEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQ  794 (1160)
T ss_pred             eccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhh
Confidence            865211                                     12457889999877543 5677888999999999999


Q ss_pred             HHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          241 KSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       241 K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |..|+..|++.|++++|||||+||++||
T Consensus       795 KE~ii~tlK~~Gy~TLMCGDGTNDVGAL  822 (1160)
T KOG0209|consen  795 KEFIITTLKKLGYVTLMCGDGTNDVGAL  822 (1160)
T ss_pred             HHHHHHHHHhcCeEEEEecCCCcchhhh
Confidence            9999999999999999999999999997

>KOG0210|consensus

Probab=100.00  E-value=4.9e-38  Score=295.44  Aligned_cols=225  Identities=20%  Similarity=0.243  Sum_probs=182.1

Q ss_pred             hhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceE
Q psy885           34 QDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRS  113 (270)
Q Consensus        34 ~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRv  113 (270)
                      ......|+++..|||+|+.|||.+||+.+.++     ++..|.|||+-+|-..-...    .+  ++++.-+++++|+|+
T Consensus       533 ~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~-----evtfylKGAD~VMs~iVq~N----dW--leEE~gNMAREGLRt  601 (1051)
T KOG0210|consen  533 LDDELNYQILQVFPFTSETKRMGIIVRDETTE-----EVTFYLKGADVVMSGIVQYN----DW--LEEECGNMAREGLRT  601 (1051)
T ss_pred             CCcceeEEEEEEeccccccceeeEEEecCCCc-----eEEEEEecchHHHhcccccc----hh--hhhhhhhhhhhcceE
Confidence            34455899999999999999999999998655     89999999999987755431    11  455566779999999


Q ss_pred             EEeecccccceeCCCC-----ccccccccc-----chh-hcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEc
Q psy885          114 LEPKSKVSAIVPWGMK-----PEDMNLADS-----TKF-ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVIT  182 (270)
Q Consensus       114 l~~~~~~~a~~~~~~~-----~~~~~~~~~-----~~~-~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlT  182 (270)
                      |.+|+|.++.++++..     .+.++..+.     +.- ..+|.+|.++|+.+.+|.++++++.+++.||+|||++||+|
T Consensus       602 LVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLT  681 (1051)
T KOG0210|consen  602 LVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLT  681 (1051)
T ss_pred             EEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEc
Confidence            9999988876665421     112222221     111 25789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhCCCCCCCCc------------------------cceeeechhhcCC---CHHHHHHhcc--CceEE
Q psy885          183 GDNKATAEAICRRIGVFTEEEDT------------------------TGKSYSGREFDDL---PLSEQKAAVA--RARLF  233 (270)
Q Consensus       183 GD~~~ta~~iA~~~gi~~~~~~~------------------------~~~~i~G~~~~~l---~~~~~~~~~~--~~~v~  233 (270)
                      ||..+||..||+..+++..++.+                        .+++|+|+.+.-.   -++|+-++.+  .++|+
T Consensus       682 GDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~  761 (1051)
T KOG0210|consen  682 GDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVC  761 (1051)
T ss_pred             CcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEE
Confidence            99999999999999999877652                        3678999887632   3456666554  46899


Q ss_pred             EecChhhHHHHHHHHhhC-CCEEEEECCcHhhhhhhc
Q psy885          234 SRVEPAHKSKIVEFLQGM-NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       234 ar~tP~~K~~iV~~lq~~-g~~V~miGDG~ND~~ai~  269 (270)
                      ||+||.||+++++.+|+. |..|++||||-||+.||-
T Consensus       762 CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq  798 (1051)
T KOG0210|consen  762 CRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQ  798 (1051)
T ss_pred             EecChhHHHHHHHHHHHhhCceEEEEcCCCccchhee
Confidence            999999999999999975 899999999999999983

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=100.00  E-value=3.2e-33  Score=272.54  Aligned_cols=156  Identities=22%  Similarity=0.289  Sum_probs=133.3

Q ss_pred             eEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeeccccc
Q psy885           43 EFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSA  122 (270)
Q Consensus        43 ~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~~~~a  122 (270)
                      ...+||++.+|+|++.++  +       +  .+.||||+.++++|+.. ....+..+.....+++++|+|++++     +
T Consensus       365 ~~~~pF~~~~k~~gv~~~--g-------~--~i~kGa~~~il~~~~~~-g~~~~~~~~~~~~~~a~~G~~~l~v-----~  427 (673)
T PRK14010        365 GEYIPFTAETRMSGVKFT--T-------R--EVYKGAPNSMVKRVKEA-GGHIPVDLDALVKGVSKKGGTPLVV-----L  427 (673)
T ss_pred             cceeccccccceeEEEEC--C-------E--EEEECCHHHHHHHhhhc-CCCCchHHHHHHHHHHhCCCeEEEE-----E
Confidence            345899999999999753  1       2  45599999999999752 1111122344455668899999988     3


Q ss_pred             ceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC
Q psy885          123 IVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEE  202 (270)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~  202 (270)
                                             .+++++|+++|.||+|++++++|+.||++||+++|+||||+.||.+||+++||.   
T Consensus       428 -----------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~---  481 (673)
T PRK14010        428 -----------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD---  481 (673)
T ss_pred             -----------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---
Confidence                                   256899999999999999999999999999999999999999999999999997   


Q ss_pred             CCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          203 EDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       203 ~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                                                  .+|||++|+||.++|+.+|++|++|+|+|||+||++||.
T Consensus       482 ----------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa  520 (673)
T PRK14010        482 ----------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALA  520 (673)
T ss_pred             ----------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHH
Confidence                                        699999999999999999999999999999999999983

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=100.00  E-value=3.1e-33  Score=272.90  Aligned_cols=158  Identities=20%  Similarity=0.226  Sum_probs=136.2

Q ss_pred             ceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCe-eeeccHHHHHhhhccceEEEeec
Q psy885           40 WKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQ-KVSLKDFSANTRFENLRSLEPKS  118 (270)
Q Consensus        40 ~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~-~~~l~~~~~~~~~~GlRvl~~~~  118 (270)
                      |+....+||++.+|+|++.+.           ...|+|||||.|++.|...  ++. +..+.+...+++++|+|++++  
T Consensus       366 ~~~~~~~pF~s~~~~~gv~~~-----------g~~~~kGa~e~il~~~~~~--g~~~~~~~~~~~~~~a~~G~~~l~v--  430 (679)
T PRK01122        366 SLHATFVPFSAQTRMSGVDLD-----------GREIRKGAVDAIRRYVESN--GGHFPAELDAAVDEVARKGGTPLVV--  430 (679)
T ss_pred             cccceeEeecCcCceEEEEEC-----------CEEEEECCHHHHHHHHHhc--CCcChHHHHHHHHHHHhCCCcEEEE--
Confidence            456778999999998888642           2478999999999999642  111 122344455668999999999  


Q ss_pred             ccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q psy885          119 KVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV  198 (270)
Q Consensus       119 ~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi  198 (270)
                         |+                       +++++|+++++||+|++++++|+.||++||+++|+||||+.||.+||+++||
T Consensus       431 ---a~-----------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI  484 (679)
T PRK01122        431 ---AE-----------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV  484 (679)
T ss_pred             ---EE-----------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence               52                       4679999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          199 FTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       199 ~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      .                               .+|||++|+||.++|+.+|++|++|+|+|||+||++||-
T Consensus       485 d-------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa  524 (679)
T PRK01122        485 D-------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALA  524 (679)
T ss_pred             c-------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHH
Confidence            6                               799999999999999999999999999999999999983

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=99.96  E-value=1.8e-29  Score=246.13  Aligned_cols=159  Identities=20%  Similarity=0.245  Sum_probs=135.2

Q ss_pred             eEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeeccc
Q psy885           41 KKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKV  120 (270)
Q Consensus        41 ~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~~~  120 (270)
                      +.....||++.+++|++.+.          +...|+|||||.|++.|... ....+..+.+...+++.+|+|++++    
T Consensus       367 ~~~~~~pf~~~~~~sg~~~~----------~g~~~~kGa~e~i~~~~~~~-g~~~~~~~~~~~~~~a~~G~r~l~v----  431 (675)
T TIGR01497       367 LHATFVEFTAQTRMSGINLD----------NGRMIRKGAVDAIKRHVEAN-GGHIPTDLDQAVDQVARQGGTPLVV----  431 (675)
T ss_pred             ccceEEEEcCCCcEEEEEEe----------CCeEEEECCHHHHHHHHHhc-CCCCcHHHHHHHHHHHhCCCeEEEE----
Confidence            45678999999888776543          12468999999999998631 1111223445556678999999999    


Q ss_pred             ccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          121 SAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       121 ~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                       |+                       +.+++|++++.||+||+++++|+.|+++||+++|+|||+..||.++|+++||. 
T Consensus       432 -a~-----------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~-  486 (675)
T TIGR01497       432 -CE-----------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD-  486 (675)
T ss_pred             -EE-----------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-
Confidence             64                       24789999999999999999999999999999999999999999999999996 


Q ss_pred             CCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          201 EEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       201 ~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                                                    .++||++|++|..+|+.+|++|+.|+|+|||+||++||-
T Consensus       487 ------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~  525 (675)
T TIGR01497       487 ------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALA  525 (675)
T ss_pred             ------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHH
Confidence                                          789999999999999999999999999999999999973

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>KOG0205|consensus

Probab=99.95  E-value=8.5e-28  Score=225.57  Aligned_cols=210  Identities=26%  Similarity=0.305  Sum_probs=171.9

Q ss_pred             hhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceE
Q psy885           34 QDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRS  113 (270)
Q Consensus        34 ~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRv  113 (270)
                      ...+..|+.++.+|||+..||.+..+..+++      +....+|||||-|+++|..-  ..-+....+.+++++++|||.
T Consensus       390 Keara~ikevhF~PFnPV~Krta~ty~d~dG------~~~r~sKGAPeqil~l~~~~--~~i~~~vh~~id~~AeRGlRS  461 (942)
T KOG0205|consen  390 KEARAGIKEVHFLPFNPVDKRTALTYIDPDG------NWHRVSKGAPEQILKLCNED--HDIPERVHSIIDKFAERGLRS  461 (942)
T ss_pred             HHHhhCceEEeeccCCccccceEEEEECCCC------CEEEecCCChHHHHHHhhcc--CcchHHHHHHHHHHHHhcchh
Confidence            4567899999999999999999988877764      67888999999999999753  333445667788899999999


Q ss_pred             EEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q psy885          114 LEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAIC  193 (270)
Q Consensus       114 l~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA  193 (270)
                      |++     |++..++...+          .-...+.|+|+.-+.||||.+..++|+.....|+.|.|+|||....+...+
T Consensus       462 LgV-----Arq~v~e~~~~----------~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTg  526 (942)
T KOG0205|consen  462 LAV-----ARQEVPEKTKE----------SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG  526 (942)
T ss_pred             hhh-----hhhcccccccc----------CCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhh
Confidence            999     88876643211          114579999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCccceeeechhh-cCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          194 RRIGVFTEEEDTTGKSYSGREF-DDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       194 ~~~gi~~~~~~~~~~~i~G~~~-~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +++|+-.+--+  +..+-|..- ..+.....++.+++..=||.+.|+||++||+.||++||.|+|+|||+||++||
T Consensus       527 rrlgmgtnmyp--ss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaL  600 (942)
T KOG0205|consen  527 RRLGMGTNMYP--SSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPAL  600 (942)
T ss_pred             hhhccccCcCC--chhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhh
Confidence            99998754221  112222221 23344456677888899999999999999999999999999999999999986

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=99.93  E-value=6.4e-25  Score=210.34  Aligned_cols=148  Identities=38%  Similarity=0.525  Sum_probs=129.7

Q ss_pred             EeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeecccc
Q psy885           42 KEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVS  121 (270)
Q Consensus        42 ~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~~~~  121 (270)
                      .+...||++.+|+|+++++..+       +  .|+||+|+.++++|..         +.+....++.+|+|++++     
T Consensus       276 ~~~~~~f~~~~~~~~~~~~~~~-------~--~~~~G~~~~i~~~~~~---------~~~~~~~~~~~g~~~~~~-----  332 (499)
T TIGR01494       276 ILNVFEFSSVRKRMSVIVRGPD-------G--TYVKGAPEFVLSRVKD---------LEEKVKELAQSGLRVLAV-----  332 (499)
T ss_pred             CcceeccCCCCceEEEEEecCC-------c--EEEeCCHHHHHHhhHH---------HHHHHHHHHhCCCEEEEE-----
Confidence            3467899999999999998632       2  4789999999999863         223334467899999999     


Q ss_pred             cceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q psy885          122 AIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE  201 (270)
Q Consensus       122 a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~  201 (270)
                      |++.                       .++|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|+++||   
T Consensus       333 a~~~-----------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---  386 (499)
T TIGR01494       333 ASKE-----------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---  386 (499)
T ss_pred             EECC-----------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---
Confidence            7542                       58999999999999999999999999999999999999999999999986   


Q ss_pred             CCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          202 EEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       202 ~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                                                     +++++|++|.++|+.+|+.|+.|+|+|||+||++||.
T Consensus       387 -------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~  423 (499)
T TIGR01494       387 -------------------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALK  423 (499)
T ss_pred             -------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHH
Confidence                                           5889999999999999999999999999999999873

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=99.91  E-value=4e-24  Score=196.89  Aligned_cols=155  Identities=20%  Similarity=0.212  Sum_probs=132.2

Q ss_pred             eEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCC-eeeeccHHHHHhhhccceEEEeecccc
Q psy885           43 EFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGS-QKVSLKDFSANTRFENLRSLEPKSKVS  121 (270)
Q Consensus        43 ~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~-~~~~l~~~~~~~~~~GlRvl~~~~~~~  121 (270)
                      -..+||+.+.|++.+-...          ..-+.|||++.|.......  ++ .+..++....+-++.|=..|++     
T Consensus       370 ~~fvpFtA~TRmSGvd~~~----------~~~irKGA~dai~~~v~~~--~g~~p~~l~~~~~~vs~~GGTPL~V-----  432 (681)
T COG2216         370 AEFVPFTAQTRMSGVDLPG----------GREIRKGAVDAIRRYVRER--GGHIPEDLDAAVDEVSRLGGTPLVV-----  432 (681)
T ss_pred             ceeeecceecccccccCCC----------CceeecccHHHHHHHHHhc--CCCCCHHHHHHHHHHHhcCCCceEE-----
Confidence            4568999998766665432          2456799999999987631  22 3444566666668888888888     


Q ss_pred             cceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q psy885          122 AIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE  201 (270)
Q Consensus       122 a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~  201 (270)
                                             ..|-.++|++.++|-+|+++++-+.+||++|||++|+||||+.||..||++.|+.  
T Consensus       433 -----------------------~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD--  487 (681)
T COG2216         433 -----------------------VENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--  487 (681)
T ss_pred             -----------------------EECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch--
Confidence                                   2456789999999999999999999999999999999999999999999999998  


Q ss_pred             CCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          202 EEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       202 ~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                                                   ...|+++||+|.++|+.-|..|+.|+|||||+||++||
T Consensus       488 -----------------------------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPAL  525 (681)
T COG2216         488 -----------------------------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPAL  525 (681)
T ss_pred             -----------------------------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhh
Confidence                                         67899999999999999999999999999999999997

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=99.89  E-value=9.3e-23  Score=199.82  Aligned_cols=91  Identities=32%  Similarity=0.462  Sum_probs=88.4

Q ss_pred             CeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHh
Q psy885          147 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAA  226 (270)
Q Consensus       147 ~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~  226 (270)
                      |-.++|++++.|++|++++++|+.||+.||+++|+||||..+|.+||+++||.                           
T Consensus       525 dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId---------------------------  577 (713)
T COG2217         525 DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID---------------------------  577 (713)
T ss_pred             CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH---------------------------
Confidence            45799999999999999999999999999999999999999999999999996                           


Q ss_pred             ccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          227 VARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       227 ~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                          .++|.+.|++|.++|+.||++|+.|+|+|||+||++||
T Consensus       578 ----~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPAL  615 (713)
T COG2217         578 ----EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPAL  615 (713)
T ss_pred             ----hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHH
Confidence                89999999999999999999999999999999999997

>KOG0207|consensus

Probab=99.86  E-value=2.1e-21  Score=189.15  Aligned_cols=92  Identities=26%  Similarity=0.417  Sum_probs=88.8

Q ss_pred             CCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHH
Q psy885          146 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKA  225 (270)
Q Consensus       146 ~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~  225 (270)
                      .|-+++|++.++|++|+++..+|..|++.||+++|+||||..||.++|+++||.                          
T Consensus       710 vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------------------------  763 (951)
T KOG0207|consen  710 VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--------------------------  763 (951)
T ss_pred             ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--------------------------
Confidence            456789999999999999999999999999999999999999999999999976                          


Q ss_pred             hccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          226 AVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       226 ~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                           .|||.+.|+||.++|+.||+++..|+|+|||+||++||
T Consensus       764 -----~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPAL  801 (951)
T KOG0207|consen  764 -----NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPAL  801 (951)
T ss_pred             -----eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHH
Confidence                 89999999999999999999999999999999999987

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.82  E-value=1.9e-20  Score=158.91  Aligned_cols=94  Identities=34%  Similarity=0.552  Sum_probs=88.3

Q ss_pred             CeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHh
Q psy885          147 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAA  226 (270)
Q Consensus       147 ~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~  226 (270)
                      ++.++|.+.+.|++|+++.++|+.|+++|++++|+|||+..++..+|+++||...                         
T Consensus       115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~-------------------------  169 (215)
T PF00702_consen  115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS-------------------------  169 (215)
T ss_dssp             SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred             cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence            6889999999999999999999999999999999999999999999999999522                         


Q ss_pred             ccCceEEEec--ChhhH--HHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          227 VARARLFSRV--EPAHK--SKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       227 ~~~~~v~ar~--tP~~K--~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                          .+|+++  +|++|  ..+|+.||..++.|+|+|||+||++|+.
T Consensus       170 ----~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~  212 (215)
T PF00702_consen  170 ----IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALK  212 (215)
T ss_dssp             ----EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHH
T ss_pred             ----cccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHH
Confidence                699999  99999  9999999977779999999999999973

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=99.81  E-value=2.9e-19  Score=178.16  Aligned_cols=148  Identities=17%  Similarity=0.167  Sum_probs=116.7

Q ss_pred             eeCCCCCCceEEEE-EecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeecccccc
Q psy885           45 TLEFSRDRKSMSSY-CTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAI  123 (270)
Q Consensus        45 ~~pF~s~~krmsvi-v~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~~~~a~  123 (270)
                      .+||.++.+.+.-. ++..-.+     .  .+.-|+|+.+.+..         ..+......+..+|+|++.+     ++
T Consensus       497 ~~~~~~~~~~~~g~Gv~~~~~g-----~--~~~ig~~~~~~~~~---------~~~~~~~~~~~~~g~~~v~v-----a~  555 (741)
T PRK11033        497 AIPEAESQRALAGSGIEGQVNG-----E--RVLICAPGKLPPLA---------DAFAGQINELESAGKTVVLV-----LR  555 (741)
T ss_pred             CCCCCcceEEEeeEEEEEEECC-----E--EEEEecchhhhhcc---------HHHHHHHHHHHhCCCEEEEE-----EE
Confidence            36888888877421 2221110     2  23458988875411         11333445568899999999     53


Q ss_pred             eeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC
Q psy885          124 VPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEE  203 (270)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~  203 (270)
                                             +..++|+++|+|++|++++++|+.|++.|++++|+|||+..+|.++|+++||.    
T Consensus       556 -----------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----  608 (741)
T PRK11033        556 -----------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----  608 (741)
T ss_pred             -----------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----
Confidence                                   34789999999999999999999999999999999999999999999999993    


Q ss_pred             CccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          204 DTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       204 ~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                                                  .+++++|++|..+|+.||+. +.|+|+|||+||++||.
T Consensus       609 ----------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~  645 (741)
T PRK11033        609 ----------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMK  645 (741)
T ss_pred             ----------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHH
Confidence                                        46778999999999999965 58999999999999873

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=99.74  E-value=7.4e-18  Score=163.57  Aligned_cols=109  Identities=26%  Similarity=0.357  Sum_probs=99.8

Q ss_pred             HHHHhhhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCC-CeEEE
Q psy885          102 FSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAG-IRVIV  180 (270)
Q Consensus       102 ~~~~~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~ag-i~v~m  180 (270)
                      ....++.+|+|++.+     +                       .+.+++|.+.++|++||+++++|+.|++.| ++++|
T Consensus       355 ~~~~~~~~g~~~~~v-----~-----------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~i  406 (556)
T TIGR01525       355 LLNEGESQGKTVVFV-----A-----------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVM  406 (556)
T ss_pred             HHHHHhhCCcEEEEE-----E-----------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEE
Confidence            344567899999999     4                       235799999999999999999999999999 99999


Q ss_pred             EcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECC
Q psy885          181 ITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSS  260 (270)
Q Consensus       181 lTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGD  260 (270)
                      +|||+..++..+++++|+.                               .+|++++|++|..+++.++..++.|+|+||
T Consensus       407 vTgd~~~~a~~i~~~lgi~-------------------------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGD  455 (556)
T TIGR01525       407 LTGDNRSAAEAVAAELGID-------------------------------EVHAELLPEDKLAIVKELQEEGGVVAMVGD  455 (556)
T ss_pred             EeCCCHHHHHHHHHHhCCC-------------------------------eeeccCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence            9999999999999999995                               789999999999999999999999999999


Q ss_pred             cHhhhhhhc
Q psy885          261 TGKTELRIF  269 (270)
Q Consensus       261 G~ND~~ai~  269 (270)
                      |.||+.|+.
T Consensus       456 g~nD~~al~  464 (556)
T TIGR01525       456 GINDAPALA  464 (556)
T ss_pred             ChhHHHHHh
Confidence            999998863

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=99.71  E-value=1.3e-16  Score=161.41  Aligned_cols=131  Identities=21%  Similarity=0.267  Sum_probs=110.8

Q ss_pred             EEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEE
Q psy885           74 LFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGV  153 (270)
Q Consensus        74 l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~  153 (270)
                      .+.+|+++.+.+....      ...+.+.......+|.+++.+     ++                       +..++|+
T Consensus       599 ~~~~G~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~v~v-----a~-----------------------~~~~~g~  644 (834)
T PRK10671        599 ALLLGNQALLNEQQVD------TKALEAEITAQASQGATPVLL-----AV-----------------------DGKAAAL  644 (834)
T ss_pred             EEEEeCHHHHHHcCCC------hHHHHHHHHHHHhCCCeEEEE-----EE-----------------------CCEEEEE
Confidence            3567999977542210      112334445557889999998     53                       2358999


Q ss_pred             EeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEE
Q psy885          154 VGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLF  233 (270)
Q Consensus       154 i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~  233 (270)
                      +.+.|++|+++.++|+.|++.|++++|+|||+..++..+|+++||.                               .+|
T Consensus       645 ~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~-------------------------------~~~  693 (834)
T PRK10671        645 LAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID-------------------------------EVI  693 (834)
T ss_pred             EEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC-------------------------------EEE
Confidence            9999999999999999999999999999999999999999999996                               789


Q ss_pred             EecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          234 SRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       234 ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      +++.|++|.++++.++.+++.|+|+|||+||+.|+.
T Consensus       694 ~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~  729 (834)
T PRK10671        694 AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALA  729 (834)
T ss_pred             eCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHH
Confidence            999999999999999999999999999999999874

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=99.67  E-value=6.7e-16  Score=149.30  Aligned_cols=93  Identities=28%  Similarity=0.423  Sum_probs=88.3

Q ss_pred             CCeEEEEEEeecCCCchhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHH
Q psy885          146 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGI-RVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQK  224 (270)
Q Consensus       146 ~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi-~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~  224 (270)
                      .|..++|.+.++|++|++++++|+.|+++|+ +++|+|||+..++..+++++|+.                         
T Consensus       349 ~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~-------------------------  403 (536)
T TIGR01512       349 RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID-------------------------  403 (536)
T ss_pred             ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh-------------------------
Confidence            3578999999999999999999999999999 99999999999999999999996                         


Q ss_pred             HhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          225 AAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       225 ~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                            .+|+++.|++|..+++.++..++.|+|+|||.||+.|+.
T Consensus       404 ------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~  442 (536)
T TIGR01512       404 ------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALA  442 (536)
T ss_pred             ------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH
Confidence                  678999999999999999999999999999999999863

.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=99.64  E-value=1.2e-15  Score=148.12  Aligned_cols=92  Identities=27%  Similarity=0.407  Sum_probs=86.7

Q ss_pred             CCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHH
Q psy885          146 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKA  225 (270)
Q Consensus       146 ~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~  225 (270)
                      .+.+++|++.++|++||+++++|+.|++.|++++|+|||+..++..+|+++||                           
T Consensus       392 ~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi---------------------------  444 (562)
T TIGR01511       392 VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI---------------------------  444 (562)
T ss_pred             ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC---------------------------
Confidence            46789999999999999999999999999999999999999999999999998                           


Q ss_pred             hccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          226 AVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       226 ~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                           .+|+++.|++|.++++.+++.++.|+|+|||.||+.|+.
T Consensus       445 -----~~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~  483 (562)
T TIGR01511       445 -----NVRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALA  483 (562)
T ss_pred             -----cEEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHh
Confidence                 267888999999999999999999999999999999863

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=99.46  E-value=2.9e-13  Score=104.69  Aligned_cols=92  Identities=20%  Similarity=0.261  Sum_probs=85.8

Q ss_pred             eEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhc
Q psy885          148 LTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAV  227 (270)
Q Consensus       148 l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~  227 (270)
                      ..+.+.++---.+-++++++|+.|++. +++++.|||...+....|.-.||...                          
T Consensus        19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------   71 (152)
T COG4087          19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------   71 (152)
T ss_pred             ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence            456788888888999999999999999 99999999999999999999998643                          


Q ss_pred             cCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          228 ARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       228 ~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                         ++||...|+.|..|++.|++.++.|.|+|||+||.+||+
T Consensus        72 ---rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr  110 (152)
T COG4087          72 ---RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALR  110 (152)
T ss_pred             ---eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhh
Confidence               899999999999999999999999999999999999985

>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit

Probab=99.44  E-value=8.6e-14  Score=103.49  Aligned_cols=67  Identities=28%  Similarity=0.363  Sum_probs=52.7

Q ss_pred             CCCccccCChhHHH--hhhhhhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccc
Q psy885           16 PNHCVSFSGRREQA--IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTH   89 (270)
Q Consensus        16 ~~~~~~~~~~~e~~--~~~~~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~   89 (270)
                      +..+.+.+......  ......++..|++++++||||+||||+|+++..+       .+++|+|||||+|+++|+.
T Consensus        22 ~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~~~~-------~~~~~~KGA~e~il~~Ct~   90 (91)
T PF13246_consen   22 DPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVRNDG-------KYILYVKGAPEVILDRCTH   90 (91)
T ss_pred             CcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEeCCC-------EEEEEcCCChHHHHHhcCC
Confidence            34444555555555  3346788999999999999999999999998211       4777999999999999986

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=98.74  E-value=4.2e-08  Score=83.54  Aligned_cols=90  Identities=11%  Similarity=0.089  Sum_probs=69.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC---ccc-eeeechhhcCCCHHHHHHhccCceEEE
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED---TTG-KSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~---~~~-~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      +++|++.++|+.|++.+ ++.++||-....+..+++.+|+..--..   +.. -.++|.                 .+  
T Consensus        68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~-----------------~~--  127 (203)
T TIGR02137        68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGY-----------------QL--  127 (203)
T ss_pred             CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECe-----------------ee--
Confidence            68999999999999975 9999999999999999999998621000   000 112221                 11  


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                       ..|+.|..+++.+++.|..+.|+|||.||..|+-
T Consensus       128 -~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~  161 (203)
T TIGR02137       128 -RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLS  161 (203)
T ss_pred             -cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHH
Confidence             3578999999999988888999999999998863

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=98.70  E-value=4.2e-08  Score=81.71  Aligned_cols=92  Identities=16%  Similarity=0.222  Sum_probs=71.1

Q ss_pred             hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChh-h
Q psy885          162 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPA-H  240 (270)
Q Consensus       162 ~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~-~  240 (270)
                      +++.+.|+.++++|++++|+||+....+..+|+.+|+....       +-+..+..-.         ......+.+|. +
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-------v~~~~~~~~~---------~~~~~~~~~~~~~  155 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-------VIGNELFDNG---------GGIFTGRITGSNC  155 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-------EEEEEEECTT---------CCEEEEEEEEEEE
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-------EEEEeeeecc---------cceeeeeECCCCC
Confidence            77779999999999999999999999999999999997421       1111111000         12556677766 4


Q ss_pred             --HHHHHHHH------hhCCCEEEEECCcHhhhhhhc
Q psy885          241 --KSKIVEFL------QGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       241 --K~~iV~~l------q~~g~~V~miGDG~ND~~ai~  269 (270)
                        |...++.+      +.....+.++|||.||.+|+.
T Consensus       156 ~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  156 GGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             SHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred             CcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence              99999999      345789999999999999974

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.62  E-value=2.2e-07  Score=79.64  Aligned_cols=94  Identities=17%  Similarity=0.190  Sum_probs=72.9

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCc---cceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDT---TGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~---~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      .+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-...   ..-+++|                  .+..
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG------------------~v~g  137 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG------------------RVVG  137 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec------------------eeee
Confidence            789999999999999999999999999999999999999997432110   0013444                  4555


Q ss_pred             ecCh-hhHHHHHHHHhh-CCC---EEEEECCcHhhhhhhc
Q psy885          235 RVEP-AHKSKIVEFLQG-MNE---ISAMDSSTGKTELRIF  269 (270)
Q Consensus       235 r~tP-~~K~~iV~~lq~-~g~---~V~miGDG~ND~~ai~  269 (270)
                      ..+. +.|...++.+.+ .|.   .+.++|||.||.+||-
T Consensus       138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~  177 (212)
T COG0560         138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLE  177 (212)
T ss_pred             eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHH
Confidence            4444 789888866654 465   4999999999999974

>KOG1615|consensus

Probab=98.62  E-value=9.3e-08  Score=79.25  Aligned_cols=92  Identities=13%  Similarity=0.219  Sum_probs=68.6

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceee--ec-----hhhcCCCHHHHHHhccCceE
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSY--SG-----REFDDLPLSEQKAAVARARL  232 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i--~G-----~~~~~l~~~~~~~~~~~~~v  232 (270)
                      +-|++++.++.|++.|.+|+++||.....+..||.++||...+-....+.+  .|     +.....              
T Consensus        89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pt--------------  154 (227)
T KOG1615|consen   89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPT--------------  154 (227)
T ss_pred             cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCcc--------------
Confidence            579999999999999999999999999999999999999864322111111  11     111111              


Q ss_pred             EEecChhhHHHHHHHHhhC--CCEEEEECCcHhhhhhh
Q psy885          233 FSRVEPAHKSKIVEFLQGM--NEISAMDSSTGKTELRI  268 (270)
Q Consensus       233 ~ar~tP~~K~~iV~~lq~~--g~~V~miGDG~ND~~ai  268 (270)
                         +...-|.+++..+++.  ...++|||||+||..|+
T Consensus       155 ---sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~  189 (227)
T KOG1615|consen  155 ---SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAM  189 (227)
T ss_pred             ---ccCCccHHHHHHHHhCCChheeEEecCCccccccC
Confidence               2344899999999884  35799999999997664

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=98.44  E-value=7.5e-07  Score=73.26  Aligned_cols=94  Identities=13%  Similarity=0.098  Sum_probs=67.3

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCc----cceeeechhhcCCCHHHHHHhccCceEEEe
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDT----TGKSYSGREFDDLPLSEQKAAVARARLFSR  235 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~----~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar  235 (270)
                      +++++.+.++.+++.|++++++||.....+..++..+|+..--...    ....++|....              .  ..
T Consensus        74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~--------------~--~~  137 (177)
T TIGR01488        74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEG--------------Q--VN  137 (177)
T ss_pred             cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCC--------------c--cc
Confidence            6899999999999999999999999999999999999985210000    00011121000              0  12


Q ss_pred             cChhhHHHHHHHHhhC----CCEEEEECCcHhhhhhhc
Q psy885          236 VEPAHKSKIVEFLQGM----NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       236 ~tP~~K~~iV~~lq~~----g~~V~miGDG~ND~~ai~  269 (270)
                      ..+..|..+++.+++.    ...|.++|||.||..|+.
T Consensus       138 ~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~  175 (177)
T TIGR01488       138 PEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLK  175 (177)
T ss_pred             CCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHh
Confidence            4567899999887654    346899999999998863

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.33  E-value=2.6e-06  Score=70.53  Aligned_cols=105  Identities=16%  Similarity=0.017  Sum_probs=69.7

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEe-c
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSR-V  236 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar-~  236 (270)
                      -++++++.++++.|++.|+++.++|+........+.+..|+..--    ..++++..... ....+.-...++..+.. .
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f----~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~  145 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF----IEIYSNPASFD-NDGRHIVWPHHCHGCCSCP  145 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe----eEEeccCceEC-CCCcEEEecCCCCccCcCC
Confidence            489999999999999999999999999999999999988875321    11222211100 00000000011111111 1


Q ss_pred             ChhhHHHHHHHHhhC-CCEEEEECCcHhhhhh
Q psy885          237 EPAHKSKIVEFLQGM-NEISAMDSSTGKTELR  267 (270)
Q Consensus       237 tP~~K~~iV~~lq~~-g~~V~miGDG~ND~~a  267 (270)
                      ....|..+++.++.+ ...+.|+|||.||..|
T Consensus       146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~a  177 (188)
T TIGR01489       146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCP  177 (188)
T ss_pred             CCCCHHHHHHHHHhhcCceEEEECCCcchhch
Confidence            223699999999887 8889999999999665

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=98.30  E-value=4.3e-06  Score=71.49  Aligned_cols=102  Identities=12%  Similarity=-0.041  Sum_probs=69.7

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEE--Ee
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLF--SR  235 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~--ar  235 (270)
                      -+++|++.++++.|++.|+++.++||.....+..+.+.++.... -......++|..+....        +.-..+  ..
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i~~n~~~~~~~~~~~~~--------p~~~~~~~~~  139 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-IYCNEADFSNEYIHIDW--------PHPCDGTCQN  139 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-EEeceeEeeCCeeEEeC--------CCCCcccccc
Confidence            47999999999999999999999999999999888887744211 00011233333322110        000111  11


Q ss_pred             cChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          236 VEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       236 ~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      .+...|..+++.++.....|.|+|||.||..|.
T Consensus       140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a  172 (214)
T TIGR03333       140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAA  172 (214)
T ss_pred             CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHH
Confidence            224579999999987778899999999997764

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=98.22  E-value=5.8e-06  Score=69.76  Aligned_cols=91  Identities=12%  Similarity=0.099  Sum_probs=67.0

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE--ec
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS--RV  236 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a--r~  236 (270)
                      ++.|++.++++.|++. +++.++|+.....+..+...+|+..--.  ......+..                .+..  -.
T Consensus        68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~----------------~i~~~~~~  128 (205)
T PRK13582         68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC--HSLEVDEDG----------------MITGYDLR  128 (205)
T ss_pred             CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc--ceEEECCCC----------------eEECcccc
Confidence            4689999999999999 9999999999999999999999852100  000010000                1111  12


Q ss_pred             ChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          237 EPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       237 tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      .|..|..+++.++..+..+.|+|||.||..|.
T Consensus       129 ~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~  160 (205)
T PRK13582        129 QPDGKRQAVKALKSLGYRVIAAGDSYNDTTML  160 (205)
T ss_pred             ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHH
Confidence            47889999999988888999999999997653

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=98.21  E-value=6e-06  Score=75.15  Aligned_cols=94  Identities=13%  Similarity=0.123  Sum_probs=66.9

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC---ccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED---TTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~---~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      =++.|++.++|+.|++.|+++.++||.....+..+.+++|+..--..   +....++|.....                 
T Consensus       180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~-----------------  242 (322)
T PRK11133        180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGD-----------------  242 (322)
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCc-----------------
Confidence            36899999999999999999999999998888899999998521000   0001112211100                 


Q ss_pred             ecChhhHHHHHHHHhhC-C---CEEEEECCcHhhhhhh
Q psy885          235 RVEPAHKSKIVEFLQGM-N---EISAMDSSTGKTELRI  268 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~-g---~~V~miGDG~ND~~ai  268 (270)
                      -+....|.++++.+.++ |   ..|.|+|||.||..|+
T Consensus       243 iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~  280 (322)
T PRK11133        243 IVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMI  280 (322)
T ss_pred             cCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHH
Confidence            02346789888887653 4   5799999999999886

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=98.20  E-value=9.2e-06  Score=68.05  Aligned_cols=96  Identities=13%  Similarity=0.074  Sum_probs=65.7

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++++++.++|+.|++.|+++.++|+-....+..+++.+|+..-    .+..+...+-....        .  ..+....|
T Consensus        80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~----~~~~~~~~~~g~~~--------p--~~~~~~~~  145 (201)
T TIGR01491        80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV----YSNELVFDEKGFIQ--------P--DGIVRVTF  145 (201)
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE----EEEEEEEcCCCeEe--------c--ceeeEEcc
Confidence            6899999999999999999999999999999999999997421    01111110000000        0  11223456


Q ss_pred             hhHHHHHHHHhhC-C---CEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGM-N---EISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~-g---~~V~miGDG~ND~~ai  268 (270)
                      ..|..+++.+.+. |   ..+.|+||+.||..|.
T Consensus       146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a  179 (201)
T TIGR01491       146 DNKGEAVERLKRELNPSLTETVAVGDSKNDLPMF  179 (201)
T ss_pred             ccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHH
Confidence            6787777776543 2   4599999999998764

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.17  E-value=1e-05  Score=69.07  Aligned_cols=92  Identities=17%  Similarity=0.187  Sum_probs=63.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCc---cceeeechhhcCCCHHHHHHhccCceEEEe
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDT---TGKSYSGREFDDLPLSEQKAAVARARLFSR  235 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~---~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar  235 (270)
                      ++++++.++|+.|++.|+++.++||.....+..+++.+|+..--...   ....++|                  .+.+.
T Consensus        85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~------------------~~~~~  146 (219)
T TIGR00338        85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTG------------------LVEGP  146 (219)
T ss_pred             CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEE------------------EecCc
Confidence            68999999999999999999999999999999999999986310000   0000111                  01111


Q ss_pred             -cChhhHHHHHHHHhhC-C---CEEEEECCcHhhhhhh
Q psy885          236 -VEPAHKSKIVEFLQGM-N---EISAMDSSTGKTELRI  268 (270)
Q Consensus       236 -~tP~~K~~iV~~lq~~-g---~~V~miGDG~ND~~ai  268 (270)
                       ..+..|..+++.+.++ |   ..+.|+||+.+|+.|.
T Consensus       147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa  184 (219)
T TIGR00338       147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMI  184 (219)
T ss_pred             ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHH
Confidence             1233477777765443 3   3588999999998774

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.14  E-value=1.3e-05  Score=61.76  Aligned_cols=110  Identities=9%  Similarity=-0.049  Sum_probs=73.4

Q ss_pred             eecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          155 GMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       155 ~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      ....++.+++.+.++.|++.|++++++||.....+..+.+.+|+.....    .++.......-..............+.
T Consensus        20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~   95 (139)
T cd01427          20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD----PVITSNGAAIYYPKEGLFLGGGPFDIG   95 (139)
T ss_pred             cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh----heeccchhhhhcccccccccccccccC
Confidence            4556889999999999999999999999999999999999998842211    111111110000000000111224444


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +-.|+.+..+.+.+......+.++||+.+|+.|.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~  129 (139)
T cd01427          96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMA  129 (139)
T ss_pred             CCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHH
Confidence            5667777777777765567899999999998775

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PLN02954 phosphoserine phosphatase

Probab=98.11  E-value=1.9e-05  Score=67.55  Aligned_cols=93  Identities=13%  Similarity=0.152  Sum_probs=62.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCcccee------eechhhcCCCHHHHHHhccCceE
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKS------YSGREFDDLPLSEQKAAVARARL  232 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~------i~G~~~~~l~~~~~~~~~~~~~v  232 (270)
                      +++|++.++++.|++.|+++.++||.....+..+++.+|+....-....+.      ++|....              ..
T Consensus        84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~--------------~~  149 (224)
T PLN02954         84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDEN--------------EP  149 (224)
T ss_pred             CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCC--------------Cc
Confidence            478999999999999999999999999999999999999863110000000      1110000              00


Q ss_pred             EEecChhhHHHHHHHHhhC-C-CEEEEECCcHhhhhh
Q psy885          233 FSRVEPAHKSKIVEFLQGM-N-EISAMDSSTGKTELR  267 (270)
Q Consensus       233 ~ar~tP~~K~~iV~~lq~~-g-~~V~miGDG~ND~~a  267 (270)
                      .  ..+..|...++.+.+. | ..+.|+||+.||..|
T Consensus       150 ~--~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~a  184 (224)
T PLN02954        150 T--SRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEA  184 (224)
T ss_pred             c--cCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHh
Confidence            0  1123477777776553 3 468999999999776

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=98.10  E-value=1.8e-05  Score=67.91  Aligned_cols=99  Identities=11%  Similarity=0.076  Sum_probs=66.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCcc--ceeeechhhcCCCHHHHHHhccCceE--EE
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTT--GKSYSGREFDDLPLSEQKAAVARARL--FS  234 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~--~~~i~G~~~~~l~~~~~~~~~~~~~v--~a  234 (270)
                      +++|++.++++.|++.|+++.++||-....+..+.+.+ +..  ..+.  ...++|..+..-.        +.-..  +.
T Consensus        74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~~k--------p~p~~~~~~  142 (219)
T PRK09552         74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITITW--------PHPCDEHCQ  142 (219)
T ss_pred             CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEEec--------cCCcccccc
Confidence            68999999999999999999999999999999999887 643  1111  1223333221000        00000  00


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      ..+...|..+++.++.....|.|+|||.||..|.
T Consensus       143 ~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa  176 (219)
T PRK09552        143 NHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAA  176 (219)
T ss_pred             ccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHH
Confidence            0012348889988887777899999999998764

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.00  E-value=3.5e-05  Score=62.60  Aligned_cols=69  Identities=20%  Similarity=0.241  Sum_probs=52.9

Q ss_pred             HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHH
Q psy885          167 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE  246 (270)
Q Consensus       167 ~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~  246 (270)
                      +|+.|++.|+++.|+||+....+..+.+.+|+.                               ..|...  ..|...+.
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~-------------------------------~~~~~~--~~k~~~~~   82 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT-------------------------------HLYQGQ--SNKLIAFS   82 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC-------------------------------EEEecc--cchHHHHH
Confidence            899999999999999999999999999999986                               222221  23455555


Q ss_pred             HH-hhC---CCEEEEECCcHhhhhhh
Q psy885          247 FL-QGM---NEISAMDSSTGKTELRI  268 (270)
Q Consensus       247 ~l-q~~---g~~V~miGDG~ND~~ai  268 (270)
                      .+ ++.   ...+.|+||+.||+.|+
T Consensus        83 ~~~~~~~~~~~~~~~vGDs~~D~~~~  108 (154)
T TIGR01670        83 DILEKLALAPENVAYIGDDLIDWPVM  108 (154)
T ss_pred             HHHHHcCCCHHHEEEECCCHHHHHHH
Confidence            44 332   35799999999998875

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=97.96  E-value=3.1e-05  Score=65.13  Aligned_cols=95  Identities=13%  Similarity=0.049  Sum_probs=67.1

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC-c---cceeeechhhcCCCHHHHHHhccCceE
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED-T---TGKSYSGREFDDLPLSEQKAAVARARL  232 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~-~---~~~~i~G~~~~~l~~~~~~~~~~~~~v  232 (270)
                      ..++++++.+.|+.+++.|++++++||.....+..+++.+|+..--.. .   ....++|+...                
T Consensus        85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~----------------  148 (202)
T TIGR01490        85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDG----------------  148 (202)
T ss_pred             HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccC----------------
Confidence            457899999999999999999999999999999999999998521000 0   00011221100                


Q ss_pred             EEecChhhHHHHHHHHhh-CCC---EEEEECCcHhhhhhh
Q psy885          233 FSRVEPAHKSKIVEFLQG-MNE---ISAMDSSTGKTELRI  268 (270)
Q Consensus       233 ~ar~tP~~K~~iV~~lq~-~g~---~V~miGDG~ND~~ai  268 (270)
                       -.+.++.|...++.+.+ .+.   .+.++||+.+|..|+
T Consensus       149 -~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~  187 (202)
T TIGR01490       149 -NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLL  187 (202)
T ss_pred             -CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHH
Confidence             11346788888877643 342   688999999999876

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.78  E-value=7e-05  Score=62.62  Aligned_cols=70  Identities=20%  Similarity=0.170  Sum_probs=54.6

Q ss_pred             HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHH
Q psy885          166 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIV  245 (270)
Q Consensus       166 ~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV  245 (270)
                      ..|+.|++.|+++.++||.....+..+++++|+.                               .+|.  ....|...+
T Consensus        55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~-------------------------------~~f~--g~~~k~~~l  101 (183)
T PRK09484         55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT-------------------------------HLYQ--GQSNKLIAF  101 (183)
T ss_pred             HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc-------------------------------eeec--CCCcHHHHH
Confidence            5899999999999999999999999999999985                               2332  223465555


Q ss_pred             HHH-hhCC---CEEEEECCcHhhhhhh
Q psy885          246 EFL-QGMN---EISAMDSSTGKTELRI  268 (270)
Q Consensus       246 ~~l-q~~g---~~V~miGDG~ND~~ai  268 (270)
                      +.+ ++.|   .-|+|+||+.||..|+
T Consensus       102 ~~~~~~~gl~~~ev~~VGDs~~D~~~a  128 (183)
T PRK09484        102 SDLLEKLAIAPEQVAYIGDDLIDWPVM  128 (183)
T ss_pred             HHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence            554 4444   4699999999998875

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=97.76  E-value=0.00017  Score=62.01  Aligned_cols=91  Identities=14%  Similarity=0.112  Sum_probs=65.0

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEec
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRV  236 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~  236 (270)
                      ...+-+++.+++..|+++|++..++|+.....+..+.+..|+..--.    .++.+....                ...-
T Consensus        87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~----~i~g~~~~~----------------~~KP  146 (220)
T COG0546          87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD----VIVGGDDVP----------------PPKP  146 (220)
T ss_pred             cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc----eEEcCCCCC----------------CCCc
Confidence            55789999999999999999999999999999999999999974321    111111111                1112


Q ss_pred             ChhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          237 EPAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       237 tP~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      .|..-..+++.+.-....++||||..+|+.|
T Consensus       147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~a  177 (220)
T COG0546         147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILA  177 (220)
T ss_pred             CHHHHHHHHHHhCCChhheEEECCCHHHHHH
Confidence            4455555555554443479999999999765

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=97.75  E-value=0.00022  Score=63.35  Aligned_cols=45  Identities=13%  Similarity=0.195  Sum_probs=41.0

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEE  202 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~  202 (270)
                      -++|||+.+.++.|++.|+++.++||-....+..+.++.|+....
T Consensus       120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~  164 (277)
T TIGR01544       120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN  164 (277)
T ss_pred             CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence            357999999999999999999999999999999999999986444

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=97.72  E-value=0.00011  Score=60.71  Aligned_cols=72  Identities=10%  Similarity=0.096  Sum_probs=53.3

Q ss_pred             HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC--hhhHHH
Q psy885          166 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE--PAHKSK  243 (270)
Q Consensus       166 ~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t--P~~K~~  243 (270)
                      ..|+.|++.|+++.++|+.....+..+.+.+|+.                               ..|....  |+--..
T Consensus        41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~-------------------------------~~f~~~kpkp~~~~~   89 (169)
T TIGR02726        41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK-------------------------------RFHEGIKKKTEPYAQ   89 (169)
T ss_pred             HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc-------------------------------EEEecCCCCHHHHHH
Confidence            5789999999999999999999999999999996                               3333332  333333


Q ss_pred             HHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          244 IVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       244 iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +++.+.-...-|+|+||+.||..|+
T Consensus        90 ~~~~l~~~~~ev~~iGD~~nDi~~~  114 (169)
T TIGR02726        90 MLEEMNISDAEVCYVGDDLVDLSMM  114 (169)
T ss_pred             HHHHcCcCHHHEEEECCCHHHHHHH
Confidence            3333322235699999999998876

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=97.54  E-value=0.00032  Score=59.78  Aligned_cols=92  Identities=15%  Similarity=0.090  Sum_probs=62.2

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEec
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRV  236 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~  236 (270)
                      .-++.+++.++++.|++.|+++.++||........+.+..|+...-    ..++++..+..                ..-
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~----------------~kp  150 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF----SVVIGGDSLPN----------------KKP  150 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc----cEEEcCCCCCC----------------CCc
Confidence            3568999999999999999999999999999999999999985321    11222211110                011


Q ss_pred             ChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          237 EPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       237 tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      .|+-=..+++.++-....+.|+||+.+|+.|.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a  182 (226)
T PRK13222        151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAA  182 (226)
T ss_pred             ChHHHHHHHHHcCCChhheEEECCCHHHHHHH
Confidence            22222334444444456799999999998764

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=97.50  E-value=0.00031  Score=59.07  Aligned_cols=90  Identities=13%  Similarity=-0.039  Sum_probs=62.7

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEec
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRV  236 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~  236 (270)
                      .+++.+++.++++.|++.|+++.++||-....+..+.+.+|+..--    ..++++.+.                 ..+-
T Consensus       104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~-----------------~~KP  162 (197)
T TIGR01548       104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF----PVQIWMEDC-----------------PPKP  162 (197)
T ss_pred             ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC----CEEEeecCC-----------------CCCc
Confidence            3456777899999999999999999999999999999999986321    112222211                 1133


Q ss_pred             ChhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          237 EPAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       237 tP~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      .|+--..+++.+.-...-++||||+.+|+.|
T Consensus       163 ~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~a  193 (197)
T TIGR01548       163 NPEPLILAAKALGVEACHAAMVGDTVDDIIT  193 (197)
T ss_pred             CHHHHHHHHHHhCcCcccEEEEeCCHHHHHH
Confidence            4444344555554445679999999999765

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=97.42  E-value=0.0005  Score=58.11  Aligned_cols=41  Identities=20%  Similarity=0.262  Sum_probs=38.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ++.+++.++++.|++.|+++.++|+-....+..+.+..|+.
T Consensus        85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~  125 (213)
T TIGR01449        85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA  125 (213)
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence            68999999999999999999999999999999999999985

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=97.38  E-value=0.00084  Score=58.51  Aligned_cols=81  Identities=15%  Similarity=0.232  Sum_probs=56.9

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcC----CCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEE
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITG----DNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLF  233 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTG----D~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~  233 (270)
                      -.+.+++.++++.|++.|+++.+||+    -...|+..+.+..|+.....  ..                       .++
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~--f~-----------------------vil  167 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM--NP-----------------------VIF  167 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc--ee-----------------------EEE
Confidence            44778899999999999999999999    45779999999899942110  11                       222


Q ss_pred             EecCh--hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          234 SRVEP--AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       234 ar~tP--~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +.-++  ..|..   .+++.| +++|+||..+|..|
T Consensus       168 ~gd~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~a  199 (237)
T PRK11009        168 AGDKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITA  199 (237)
T ss_pred             cCCCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHH
Confidence            22221  33444   444555 48999999999755

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=97.33  E-value=0.0011  Score=55.81  Aligned_cols=90  Identities=16%  Similarity=0.138  Sum_probs=58.9

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++.|+++.++|+.....+..+.+..|+..--.    .+++..+.                ...+-.
T Consensus        74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~----------------~~~KP~  133 (205)
T TIGR01454        74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFD----HVIGSDEV----------------PRPKPA  133 (205)
T ss_pred             cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhee----eEEecCcC----------------CCCCCC
Confidence            3788999999999999999999999999888888888888853111    11221111                001112


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      |+-=..+++.+.-...-++||||+.+|+.|
T Consensus       134 ~~~~~~~~~~~~~~~~~~l~igD~~~Di~a  163 (205)
T TIGR01454       134 PDIVREALRLLDVPPEDAVMVGDAVTDLAS  163 (205)
T ss_pred             hHHHHHHHHHcCCChhheEEEcCCHHHHHH
Confidence            222223333333234569999999999754

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=97.29  E-value=0.0012  Score=56.11  Aligned_cols=89  Identities=15%  Similarity=0.170  Sum_probs=59.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+.....+..+.+..|+..--    ..++++....                ..+-.|
T Consensus        82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~----------------~~Kp~p  141 (214)
T PRK13288         82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF----DVVITLDDVE----------------HAKPDP  141 (214)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce----eEEEecCcCC----------------CCCCCc
Confidence            47899999999999999999999999999999888899986321    1122221110                011123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +-=..+++.+.-....++||||+.+|+.|
T Consensus       142 ~~~~~~~~~~~~~~~~~~~iGDs~~Di~a  170 (214)
T PRK13288        142 EPVLKALELLGAKPEEALMVGDNHHDILA  170 (214)
T ss_pred             HHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence            32233444443334568999999999765

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=97.23  E-value=0.0013  Score=56.77  Aligned_cols=89  Identities=13%  Similarity=0.015  Sum_probs=59.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++.|+++.++|+.....+..+-+..|+...-    ..++++....                ..+-.|
T Consensus        95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f----~~i~~~~~~~----------------~~KP~p  154 (229)
T PRK13226         95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC----AVLIGGDTLA----------------ERKPHP  154 (229)
T ss_pred             eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc----cEEEecCcCC----------------CCCCCH
Confidence            67899999999999999999999999988888877888875321    1122222110                011223


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +-=..+++.+.-...-++||||+.+|+.|
T Consensus       155 ~~~~~~~~~l~~~p~~~l~IGDs~~Di~a  183 (229)
T PRK13226        155 LPLLVAAERIGVAPTDCVYVGDDERDILA  183 (229)
T ss_pred             HHHHHHHHHhCCChhhEEEeCCCHHHHHH
Confidence            22233444444334669999999999765

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=97.22  E-value=0.0011  Score=58.96  Aligned_cols=43  Identities=14%  Similarity=0.194  Sum_probs=38.5

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ..++.+++.++|+.|+..|+++.|+|+-....+..+....|+.
T Consensus        99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~  141 (272)
T PRK13223         99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG  141 (272)
T ss_pred             CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH
Confidence            3478999999999999999999999999988888888888874

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=97.20  E-value=0.002  Score=57.38  Aligned_cols=42  Identities=19%  Similarity=0.279  Sum_probs=39.0

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      ++.|++.++++.|++.|+++.++|+.....+..+-+.+|+..
T Consensus       142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~  183 (273)
T PRK13225        142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS  183 (273)
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence            678999999999999999999999999999999999999853

>PRK08238 hypothetical protein; Validated

Probab=97.16  E-value=0.0024  Score=61.25  Aligned_cols=84  Identities=19%  Similarity=0.256  Sum_probs=62.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      |+++++.+.++.+++.|++++++|+-....+..+++.+|+.+       .++.++..                  .+..|
T Consensus        72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-------~Vigsd~~------------------~~~kg  126 (479)
T PRK08238         72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-------GVFASDGT------------------TNLKG  126 (479)
T ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-------EEEeCCCc------------------cccCC
Confidence            478999999999999999999999999999999999999842       23333221                  13556


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +.|...+...-..+ -+.++||..+|..+.
T Consensus       127 ~~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~  155 (479)
T PRK08238        127 AAKAAALVEAFGER-GFDYAGNSAADLPVW  155 (479)
T ss_pred             chHHHHHHHHhCcc-CeeEecCCHHHHHHH
Confidence            66766554322222 257889999998875

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=97.14  E-value=0.0013  Score=57.25  Aligned_cols=82  Identities=12%  Similarity=0.204  Sum_probs=56.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGD----NKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD----~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      .+.+++.++++.+++.|+++.++|+=    ...++..+.+.+|+....    ..+++|+....                 
T Consensus       114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f----~~i~~~d~~~~-----------------  172 (237)
T TIGR01672       114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN----PVIFAGDKPGQ-----------------  172 (237)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe----eEEECCCCCCC-----------------
Confidence            34555999999999999999999996    677999999999996321    12333322110                 


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                       -.| +|.   ..+++.| ++.|+||..||..|
T Consensus       173 -~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~a  199 (237)
T TIGR01672       173 -YQY-TKT---QWIQDKN-IRIHYGDSDNDITA  199 (237)
T ss_pred             -CCC-CHH---HHHHhCC-CeEEEeCCHHHHHH
Confidence             012 232   3455555 47999999999865

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=97.14  E-value=0.0043  Score=54.96  Aligned_cols=86  Identities=15%  Similarity=0.177  Sum_probs=61.7

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEE
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDN---KATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLF  233 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~---~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~  233 (270)
                      ..++-|++.++++.|++.|+++.++|+=.   ...+...-+..|+......                          .++
T Consensus       116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d--------------------------~ll  169 (266)
T TIGR01533       116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE--------------------------HLL  169 (266)
T ss_pred             CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc--------------------------eEE
Confidence            45678999999999999999999999954   3334455566788632111                          344


Q ss_pred             EecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          234 SRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       234 ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      .|-....|....+.+.+...+|+++||-.+|....
T Consensus       170 lr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~  204 (266)
T TIGR01533       170 LKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF  204 (266)
T ss_pred             eCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence            44333456677777766667899999999998654

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=97.09  E-value=0.0023  Score=53.64  Aligned_cols=41  Identities=17%  Similarity=0.421  Sum_probs=37.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ++.+++.++++.|++.|+++.++|+-+......+.+.+|+.
T Consensus        92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~  132 (198)
T TIGR01428        92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD  132 (198)
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence            57899999999999999999999998888888888888974

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=97.07  E-value=0.00067  Score=54.73  Aligned_cols=70  Identities=23%  Similarity=0.224  Sum_probs=56.4

Q ss_pred             HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHH
Q psy885          166 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIV  245 (270)
Q Consensus       166 ~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV  245 (270)
                      .-|+.|.++||++.+|||-+...+..=|+++||.                               .+|-.  ..+|....
T Consensus        42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~-------------------------------~~~qG--~~dK~~a~   88 (170)
T COG1778          42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK-------------------------------HLYQG--ISDKLAAF   88 (170)
T ss_pred             HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc-------------------------------eeeec--hHhHHHHH
Confidence            3588899999999999999999999999999996                               33332  34777777


Q ss_pred             HHHhhC-C---CEEEEECCcHhhhhhh
Q psy885          246 EFLQGM-N---EISAMDSSTGKTELRI  268 (270)
Q Consensus       246 ~~lq~~-g---~~V~miGDG~ND~~ai  268 (270)
                      +.|.++ +   .-|+++||-.||-+++
T Consensus        89 ~~L~~~~~l~~e~~ayiGDD~~Dlpvm  115 (170)
T COG1778          89 EELLKKLNLDPEEVAYVGDDLVDLPVM  115 (170)
T ss_pred             HHHHHHhCCCHHHhhhhcCccccHHHH
Confidence            776543 2   4699999999998875

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=97.03  E-value=0.0033  Score=54.86  Aligned_cols=87  Identities=14%  Similarity=0.101  Sum_probs=59.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++.|+++.++|+.....+..+-+..|+..--   ...++++.+..                  +..|
T Consensus        99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f---~d~ii~~~~~~------------------~~KP  157 (253)
T TIGR01422        99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR---PDYNVTTDDVP------------------AGRP  157 (253)
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC---CceEEccccCC------------------CCCC
Confidence            56899999999999999999999999999999888888876321   01223222211                  1123


Q ss_pred             hhHHHHHHHHhhCC----CEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMN----EISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g----~~V~miGDG~ND~~a  267 (270)
                       +...+..++++.|    ..++||||..+|+.|
T Consensus       158 -~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~a  189 (253)
T TIGR01422       158 -APWMALKNAIELGVYDVAACVKVGDTVPDIEE  189 (253)
T ss_pred             -CHHHHHHHHHHcCCCCchheEEECCcHHHHHH
Confidence             2233445555544    348999999999765

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=97.03  E-value=0.0028  Score=54.21  Aligned_cols=87  Identities=11%  Similarity=0.118  Sum_probs=59.7

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.|++.++|+.|++.|+++.++|+........+.+..||..--.    .++++..+.                  ...
T Consensus        91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~------------------~~K  148 (222)
T PRK10826         91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD----ALASAEKLP------------------YSK  148 (222)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc----EEEEcccCC------------------CCC
Confidence            4688999999999999999999999999999999999998763211    122221110                  111


Q ss_pred             hhhHHHHHHHHhhCC---CEEEEECCcHhhhhh
Q psy885          238 PAHKSKIVEFLQGMN---EISAMDSSTGKTELR  267 (270)
Q Consensus       238 P~~K~~iV~~lq~~g---~~V~miGDG~ND~~a  267 (270)
                      |.-. -+...+++.|   .-++|+||..||+.|
T Consensus       149 p~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~a  180 (222)
T PRK10826        149 PHPE-VYLNCAAKLGVDPLTCVALEDSFNGMIA  180 (222)
T ss_pred             CCHH-HHHHHHHHcCCCHHHeEEEcCChhhHHH
Confidence            2211 3334445444   458899999999765

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=96.81  E-value=0.0058  Score=53.38  Aligned_cols=89  Identities=13%  Similarity=0.131  Sum_probs=60.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++.|+++.++|+-....+..+-+.+||..--    ..++++.+...-                +-.|
T Consensus       108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F----d~iv~~~~~~~~----------------KP~p  167 (248)
T PLN02770        108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF----QAVIIGSECEHA----------------KPHP  167 (248)
T ss_pred             CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC----cEEEecCcCCCC----------------CCCh
Confidence            57899999999999999999999999999999988999986321    123444332111                1123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +-=..+.+.+.-....+.|+||..+|+.|
T Consensus       168 ~~~~~a~~~~~~~~~~~l~vgDs~~Di~a  196 (248)
T PLN02770        168 DPYLKALEVLKVSKDHTFVFEDSVSGIKA  196 (248)
T ss_pred             HHHHHHHHHhCCChhHEEEEcCCHHHHHH
Confidence            22233333333334568899999999754

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=96.80  E-value=0.0094  Score=50.67  Aligned_cols=41  Identities=24%  Similarity=0.359  Sum_probs=38.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+.+.+.++|+.|++.|+++++.||=....+..+++.+++.
T Consensus        18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~   58 (215)
T TIGR01487        18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS   58 (215)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence            47889999999999999999999999999999999999875

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=96.78  E-value=0.0068  Score=51.53  Aligned_cols=42  Identities=24%  Similarity=0.343  Sum_probs=39.1

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .++.+|+.++++.|++.|+++.++|+-....+..+.+..|+.
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~  127 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT  127 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence            479999999999999999999999999999999998888875

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=96.77  E-value=0.0081  Score=52.97  Aligned_cols=87  Identities=14%  Similarity=0.082  Sum_probs=57.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++-|++.++|+.|++.|+++.++|+.....+..+-+..|+..-..   ..++++.+..                  ..-|
T Consensus       101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~---d~i~~~~~~~------------------~~KP  159 (267)
T PRK13478        101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP---DHVVTTDDVP------------------AGRP  159 (267)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc---eEEEcCCcCC------------------CCCC
Confidence            578999999999999999999999999988877777776643110   1122222110                  0112


Q ss_pred             hhHHHHHHHHhhCC----CEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMN----EISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g----~~V~miGDG~ND~~a  267 (270)
                       +...+.+++++.|    .-++||||+.+|+.|
T Consensus       160 -~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~a  191 (267)
T PRK13478        160 -YPWMALKNAIELGVYDVAACVKVDDTVPGIEE  191 (267)
T ss_pred             -ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHH
Confidence             2233445555543    458999999999754

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=96.76  E-value=0.007  Score=49.51  Aligned_cols=40  Identities=18%  Similarity=0.314  Sum_probs=33.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ++.|++.++++.|++.|+++.++|+-.... ..+...+|+.
T Consensus        85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~  124 (183)
T TIGR01509        85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR  124 (183)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence            688999999999999999999999988777 5555557775

HAD subfamilies caused by an overly broad single model.

>PRK06769 hypothetical protein; Validated

Probab=96.66  E-value=0.0091  Score=49.32  Aligned_cols=27  Identities=15%  Similarity=0.106  Sum_probs=24.7

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCH
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNK  186 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~  186 (270)
                      +.|++.++++.|++.|+++.++|....
T Consensus        29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~   55 (173)
T PRK06769         29 LFPFTKASLQKLKANHIKIFSFTNQPG   55 (173)
T ss_pred             ECCCHHHHHHHHHHCCCEEEEEECCch
Confidence            679999999999999999999998753

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=96.63  E-value=0.012  Score=48.92  Aligned_cols=53  Identities=19%  Similarity=0.094  Sum_probs=43.8

Q ss_pred             CeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhCCC
Q psy885          147 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD-NKATAEAICRRIGVF  199 (270)
Q Consensus       147 ~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD-~~~ta~~iA~~~gi~  199 (270)
                      +........-.-++.+++.++++.|++.|+++.++|+- ....+..+-..+|+.
T Consensus        33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~   86 (174)
T TIGR01685        33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT   86 (174)
T ss_pred             CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence            34455556666678999999999999999999999965 888888888888874

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=96.61  E-value=0.0093  Score=53.36  Aligned_cols=101  Identities=15%  Similarity=0.058  Sum_probs=67.8

Q ss_pred             eecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          155 GMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       155 ~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      ...+++.+++.++|+.|++.|++++++||-...++..+.+.+|+....  +.  .+.|.+.       ....+.. .--.
T Consensus       183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~--f~--~i~~~~~-------~~~~~~~-~~~~  250 (300)
T PHA02530        183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIW--FD--DLIGRPP-------DMHFQRE-QGDK  250 (300)
T ss_pred             cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCc--hh--hhhCCcc-------hhhhccc-CCCC
Confidence            367899999999999999999999999999999999999998886310  00  1111110       0000000 0002


Q ss_pred             ecChhhHHHHHHHHhh-CCCEEEEECCcHhhhhh
Q psy885          235 RVEPAHKSKIVEFLQG-MNEISAMDSSTGKTELR  267 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~-~g~~V~miGDG~ND~~a  267 (270)
                      +-.|+-+...++.+-. .-..++|+||..+|+.|
T Consensus       251 kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~  284 (300)
T PHA02530        251 RPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDM  284 (300)
T ss_pred             CCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHH
Confidence            4456677777766533 33689999999999765

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=96.60  E-value=0.0037  Score=54.35  Aligned_cols=104  Identities=16%  Similarity=0.124  Sum_probs=67.7

Q ss_pred             CCchhHHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechh-hcCCCHHHHHHhccCceEEEe
Q psy885          159 PPRKEVFDSIARC--RAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGRE-FDDLPLSEQKAAVARARLFSR  235 (270)
Q Consensus       159 ~lr~~~~~~I~~l--~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~-~~~l~~~~~~~~~~~~~v~ar  235 (270)
                      |+.|+..++++.|  +..|+.+++||--|...-..+-+.-|+...-.    .++|... ++. .. .+.-...+.+-+.+
T Consensus        71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~----~I~TNpa~~~~-~G-~l~v~pyh~h~C~~  144 (234)
T PF06888_consen   71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS----EIFTNPACFDA-DG-RLRVRPYHSHGCSL  144 (234)
T ss_pred             CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc----eEEeCCceecC-Cc-eEEEeCccCCCCCc
Confidence            5788999999999  56899999999999999899989988863211    1232221 110 00 00000001122333


Q ss_pred             cCh-hhHHHHHHHHhhC----C---CEEEEECCcHhh-hhhh
Q psy885          236 VEP-AHKSKIVEFLQGM----N---EISAMDSSTGKT-ELRI  268 (270)
Q Consensus       236 ~tP-~~K~~iV~~lq~~----g---~~V~miGDG~ND-~~ai  268 (270)
                      +.| .=|..+++.+++.    |   ..|.+||||.|| ++++
T Consensus       145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~  186 (234)
T PF06888_consen  145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL  186 (234)
T ss_pred             CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence            334 4799999988764    4   689999999999 5554

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=96.58  E-value=0.0096  Score=52.25  Aligned_cols=41  Identities=24%  Similarity=0.381  Sum_probs=39.3

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      +.+.+.++|+++++.|++++++||=....+..+.+++++..
T Consensus        21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~   61 (264)
T COG0561          21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG   61 (264)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence            88999999999999999999999999999999999999874

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=96.54  E-value=0.0096  Score=52.58  Aligned_cols=89  Identities=10%  Similarity=-0.008  Sum_probs=58.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+-....+..+-+.+||..--    ..++++.+...-                .-.|
T Consensus       109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F----d~ii~~~d~~~~----------------KP~P  168 (260)
T PLN03243        109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF----SVVLAAEDVYRG----------------KPDP  168 (260)
T ss_pred             ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC----cEEEecccCCCC----------------CCCH
Confidence            57899999999999999999999999999999988889986321    234444332110                1112


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +-=...++.+.-....++||||..+|+.|
T Consensus       169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~a  197 (260)
T PLN03243        169 EMFMYAAERLGFIPERCIVFGNSNSSVEA  197 (260)
T ss_pred             HHHHHHHHHhCCChHHeEEEcCCHHHHHH
Confidence            21122222232223458889999998654

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=96.50  E-value=0.011  Score=50.20  Aligned_cols=86  Identities=20%  Similarity=0.107  Sum_probs=57.3

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++.|++++++|+-....+....+.+|+..--    ..++++.+..                  +..|
T Consensus        94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f----~~i~~~~~~~------------------~~KP  151 (221)
T TIGR02253        94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF----DAVITSEEEG------------------VEKP  151 (221)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc----cEEEEeccCC------------------CCCC
Confidence            68899999999999999999999998888888777888875321    1122222211                  1223


Q ss_pred             hhHHHHHHHHhhCC---CEEEEECCcH-hhhhh
Q psy885          239 AHKSKIVEFLQGMN---EISAMDSSTG-KTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g---~~V~miGDG~-ND~~a  267 (270)
                      ... .+..++++.|   ..++||||.. +|+.+
T Consensus       152 ~~~-~~~~~~~~~~~~~~~~~~igDs~~~di~~  183 (221)
T TIGR02253       152 HPK-IFYAALKRLGVKPEEAVMVGDRLDKDIKG  183 (221)
T ss_pred             CHH-HHHHHHHHcCCChhhEEEECCChHHHHHH
Confidence            221 2334444443   4689999997 89644

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=96.49  E-value=0.007  Score=50.24  Aligned_cols=100  Identities=11%  Similarity=0.002  Sum_probs=62.3

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE--ec
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS--RV  236 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a--r~  236 (270)
                      .++|+.++.++.++..+++++++|+.-.-....+-..++  .......--+++.+..-..       -.++..++-  ..
T Consensus        73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv--gke~i~~idi~sn~~~ih~-------dg~h~i~~~~ds~  143 (220)
T COG4359          73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV--GKERIYCIDIVSNNDYIHI-------DGQHSIKYTDDSQ  143 (220)
T ss_pred             ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc--cccceeeeEEeecCceEcC-------CCceeeecCCccc
Confidence            479999999999999999999999877666665555544  1110000001111000000       000111111  12


Q ss_pred             ChhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          237 EPAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       237 tP~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      .-.+|...|+.|++....+.|||||+.|..|
T Consensus       144 fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsa  174 (220)
T COG4359         144 FGHDKSSVIHELSEPNESIFYCGDSVSDLSA  174 (220)
T ss_pred             cCCCcchhHHHhhcCCceEEEecCCcccccH
Confidence            3458999999999999999999999999665

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=96.39  E-value=0.012  Score=50.70  Aligned_cols=42  Identities=17%  Similarity=0.208  Sum_probs=37.2

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      -.+.+++.++++.|++.|+++.++|.-....+...-+..|+.
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~  133 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD  133 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence            367899999999999999999999998888888777778875

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=96.39  E-value=0.022  Score=45.48  Aligned_cols=40  Identities=18%  Similarity=0.272  Sum_probs=34.2

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI  196 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~  196 (270)
                      ..+..+++.++++.|++.|+++.++|+-....+..+.+..
T Consensus        62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~  101 (154)
T TIGR01549        62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH  101 (154)
T ss_pred             hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence            3445689999999999999999999999988888777765

HAD subfamilies caused by an overly broad single model.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=96.37  E-value=0.0096  Score=48.95  Aligned_cols=84  Identities=7%  Similarity=0.090  Sum_probs=52.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++|+.|++.|+++.++|+...  +..+.+.+|+...-    ..++++.+.                  .+..|
T Consensus        87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f----~~~~~~~~~------------------~~~kp  142 (185)
T TIGR01990        87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF----DAIVDPAEI------------------KKGKP  142 (185)
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC----cEEEehhhc------------------CCCCC
Confidence            6789999999999999999999997432  34566777775221    112322221                  11122


Q ss_pred             hhHHHHHHHHhhCC---CEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMN---EISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g---~~V~miGDG~ND~~a  267 (270)
                      . ...+-..+++.+   ..++||||..+|+.|
T Consensus       143 ~-p~~~~~~~~~~~~~~~~~v~vgD~~~di~a  173 (185)
T TIGR01990       143 D-PEIFLAAAEGLGVSPSECIGIEDAQAGIEA  173 (185)
T ss_pred             C-hHHHHHHHHHcCCCHHHeEEEecCHHHHHH
Confidence            2 222333444433   459999999999765

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=96.35  E-value=0.015  Score=46.64  Aligned_cols=91  Identities=15%  Similarity=0.181  Sum_probs=61.3

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEec
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRV  236 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~  236 (270)
                      ..++.+++.++++.|++.|++++++|+-.......+.+.+|+..--.    .++.+.+....                .-
T Consensus        75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~----~i~~~~~~~~~----------------Kp  134 (176)
T PF13419_consen   75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFD----EIISSDDVGSR----------------KP  134 (176)
T ss_dssp             GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCS----EEEEGGGSSSS----------------TT
T ss_pred             ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccc----cccccchhhhh----------------hh
Confidence            44689999999999999999999999999999999999999873211    23333222111                01


Q ss_pred             ChhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          237 EPAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       237 tP~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      .|+-=..+++.+.-....++||||...|+.+
T Consensus       135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~  165 (176)
T PF13419_consen  135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEA  165 (176)
T ss_dssp             SHHHHHHHHHHHTSSGGGEEEEESSHHHHHH
T ss_pred             HHHHHHHHHHHcCCCcceEEEEeCCHHHHHH
Confidence            1222223333343345679999999999654

...

>PRK11587 putative phosphatase; Provisional

Probab=96.32  E-value=0.017  Score=49.19  Aligned_cols=40  Identities=15%  Similarity=0.184  Sum_probs=33.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV  198 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi  198 (270)
                      ++.|++.++++.|++.|+++.++|+.....+..+-+..|+
T Consensus        83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l  122 (218)
T PRK11587         83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL  122 (218)
T ss_pred             eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence            5789999999999999999999999887666655566666

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=96.31  E-value=0.0077  Score=49.54  Aligned_cols=40  Identities=18%  Similarity=0.224  Sum_probs=34.0

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      -++.|++.++++.|++.|+++.++|+-  ..+..+-+.+|+.
T Consensus        87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~  126 (185)
T TIGR02009        87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT  126 (185)
T ss_pred             CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence            468999999999999999999999986  5566667778875

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=96.28  E-value=0.032  Score=45.91  Aligned_cols=41  Identities=20%  Similarity=0.383  Sum_probs=34.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDN-KATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~-~~ta~~iA~~~gi~  199 (270)
                      .+-+++.++++.|++.|+++.++|+-. ...+..+++.+|+.
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~   84 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP   84 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence            567999999999999999999999987 56677777777764

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=96.22  E-value=0.04  Score=47.04  Aligned_cols=96  Identities=10%  Similarity=-0.005  Sum_probs=65.2

Q ss_pred             CCchhHHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceE-EEec
Q psy885          159 PPRKEVFDSIA-RCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARL-FSRV  236 (270)
Q Consensus       159 ~lr~~~~~~I~-~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v-~ar~  236 (270)
                      .++|++.++|+ .+++.|++++++|+-....+..+|+..++.....     +| |.++..-..         ..+ -..+
T Consensus        94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-----~i-~t~le~~~g---------g~~~g~~c  158 (210)
T TIGR01545        94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-----LI-ASQIERGNG---------GWVLPLRC  158 (210)
T ss_pred             CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-----EE-EEEeEEeCC---------ceEcCccC
Confidence            57999999996 7888999999999999999999999976643211     12 222221000         011 1235


Q ss_pred             ChhhHHHHHHHH-hhCCCEEEEECCcHhhhhhhc
Q psy885          237 EPAHKSKIVEFL-QGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       237 tP~~K~~iV~~l-q~~g~~V~miGDG~ND~~ai~  269 (270)
                      .-+.|..-++.+ .......-+=||..||.+||-
T Consensus       159 ~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~  192 (210)
T TIGR01545       159 LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLA  192 (210)
T ss_pred             CChHHHHHHHHHhCCChhheEEecCCcccHHHHH
Confidence            678888877754 322334568899999999874

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=96.15  E-value=0.018  Score=48.28  Aligned_cols=40  Identities=13%  Similarity=0.229  Sum_probs=32.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+-|++.++++.|++.|+++.++|.-... ...+.+.+|+.
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~  144 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL  144 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH
Confidence            57899999999999999999999976554 45566677774

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=96.15  E-value=0.039  Score=42.99  Aligned_cols=42  Identities=24%  Similarity=0.338  Sum_probs=36.2

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDN--------KATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~--------~~ta~~iA~~~gi~  199 (270)
                      -++.+++.++++.|++.|+++.++|+..        ......+.+.+|+.
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~   73 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP   73 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence            3578999999999999999999999988        66677777888874

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>KOG4383|consensus

Probab=96.09  E-value=0.02  Score=56.18  Aligned_cols=187  Identities=16%  Similarity=0.210  Sum_probs=122.0

Q ss_pred             eCChHHHHHhccccccCCeeeeccHHHHHh--------hhccceEEEeecccc--------cce--eCCCCcccccc---
Q psy885           77 KGAPEGVLERCTHARIGSQKVSLKDFSANT--------RFENLRSLEPKSKVS--------AIV--PWGMKPEDMNL---  135 (270)
Q Consensus        77 KGApe~Il~~c~~~~~~~~~~~l~~~~~~~--------~~~GlRvl~~~~~~~--------a~~--~~~~~~~~~~~---  135 (270)
                      -|-.+.+.+.|+.+.++....|++-..+..        ...| .++||+||..        +-|  +++.++..-..   
T Consensus       697 ~g~ad~~~eACTdfWdGadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~  775 (1354)
T KOG4383|consen  697 FGFADFFEEACTDFWDGADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA  775 (1354)
T ss_pred             ccHHHHHHHHhhhhcCCceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence            477888999999999988888887554432        3344 5899955532        111  11211100000   


Q ss_pred             ----------cc-cchh----------------hcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHH
Q psy885          136 ----------AD-STKF----------------ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKAT  188 (270)
Q Consensus       136 ----------~~-~~~~----------------~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~t  188 (270)
                                +| ...+                .+.-++-+|.|++.+.=..+.++-..|+.|-++.||.+-.+-.+..-
T Consensus       776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk  855 (1354)
T KOG4383|consen  776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK  855 (1354)
T ss_pred             ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence                      00 0011                11224568999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCccc--------------------------------eeeech---------------hhcCCCH-
Q psy885          189 AEAICRRIGVFTEEEDTTG--------------------------------KSYSGR---------------EFDDLPL-  220 (270)
Q Consensus       189 a~~iA~~~gi~~~~~~~~~--------------------------------~~i~G~---------------~~~~l~~-  220 (270)
                      ..-.|.++||-....--++                                ...+-.               .|..++. 
T Consensus       856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd  935 (1354)
T KOG4383|consen  856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD  935 (1354)
T ss_pred             HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence            9999999998743211000                                000000               0011100 


Q ss_pred             ------------------------HHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhh
Q psy885          221 ------------------------SEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKT  264 (270)
Q Consensus       221 ------------------------~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND  264 (270)
                                              ++.+...--+-+|..++|+.--+.|+.+|+.|.+|+.+|...|-
T Consensus       936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~ 1003 (1354)
T KOG4383|consen  936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANA 1003 (1354)
T ss_pred             hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEecccccc
Confidence                                    00111111346899999999999999999999999999998885

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=96.05  E-value=0.019  Score=45.93  Aligned_cols=41  Identities=27%  Similarity=0.397  Sum_probs=32.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNK---------------ATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~---------------~ta~~iA~~~gi~  199 (270)
                      .+.+++.++++.|++.|+++.++|....               .....+.+.+|+.
T Consensus        27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   82 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA   82 (147)
T ss_pred             EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc
Confidence            4689999999999999999999998652               3344556677764

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PRK11590 hypothetical protein; Provisional

Probab=96.04  E-value=0.063  Score=45.65  Aligned_cols=96  Identities=10%  Similarity=0.044  Sum_probs=65.2

Q ss_pred             CCchhHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE-ec
Q psy885          159 PPRKEVFDSI-ARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS-RV  236 (270)
Q Consensus       159 ~lr~~~~~~I-~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a-r~  236 (270)
                      .+.|++.++| +.+++.|++++++|+-....+..+++.+|+.... .    ++ |.++...         ....+.. .+
T Consensus        95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~----~i-~t~l~~~---------~tg~~~g~~c  159 (211)
T PRK11590         95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-N----LI-ASQMQRR---------YGGWVLTLRC  159 (211)
T ss_pred             cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-c----eE-EEEEEEE---------EccEECCccC
Confidence            5689999999 5788899999999999999999999999963211 1    11 2222110         0012222 26


Q ss_pred             ChhhHHHHHHHH-hhCCCEEEEECCcHhhhhhhc
Q psy885          237 EPAHKSKIVEFL-QGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       237 tP~~K~~iV~~l-q~~g~~V~miGDG~ND~~ai~  269 (270)
                      ..+.|..-++.+ .......-+=||..||.+||-
T Consensus       160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~  193 (211)
T PRK11590        160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLY  193 (211)
T ss_pred             CChHHHHHHHHHhCCCcceEEEecCCcccHHHHH
Confidence            678888877754 323344557899999999873

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=96.03  E-value=0.039  Score=45.64  Aligned_cols=26  Identities=38%  Similarity=0.597  Sum_probs=24.3

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDN  185 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~  185 (270)
                      +.+++.++++.|++.|+++.++|...
T Consensus        30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~   55 (181)
T PRK08942         30 PIPGSIEAIARLKQAGYRVVVATNQS   55 (181)
T ss_pred             ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence            67999999999999999999999875

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=95.98  E-value=0.012  Score=47.35  Aligned_cols=85  Identities=13%  Similarity=-0.031  Sum_probs=58.5

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEec
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRV  236 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~  236 (270)
                      .-.+||++.++++.|+ .++++.++|.-....+..+-+.+++...   +...++++.+..                    
T Consensus        43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~---~f~~i~~~~d~~--------------------   98 (148)
T smart00577       43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY---FGYRRLFRDECV--------------------   98 (148)
T ss_pred             EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC---EeeeEEECcccc--------------------
Confidence            3357999999999999 5799999999999999999888887421   111233332221                    


Q ss_pred             ChhhHHHHHHHHhhC---CCEEEEECCcHhhhhh
Q psy885          237 EPAHKSKIVEFLQGM---NEISAMDSSTGKTELR  267 (270)
Q Consensus       237 tP~~K~~iV~~lq~~---g~~V~miGDG~ND~~a  267 (270)
                        ..|-.+.+.++..   ..-+.|+||..+|..|
T Consensus        99 --~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~a  130 (148)
T smart00577       99 --FVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPF  130 (148)
T ss_pred             --ccCCeEeecHHHcCCChhcEEEEECCHHHhhc
Confidence              1111144444443   4679999999999765

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=95.80  E-value=0.038  Score=43.25  Aligned_cols=39  Identities=13%  Similarity=0.170  Sum_probs=34.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGD-NKATAEAICRRIG  197 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD-~~~ta~~iA~~~g  197 (270)
                      ++.+++.++++.|++.|+++.++|+- ....+..+-+..+
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~   68 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE   68 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence            78999999999999999999999999 7777777666666

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=95.80  E-value=0.028  Score=53.67  Aligned_cols=85  Identities=7%  Similarity=-0.026  Sum_probs=58.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++.|+++.++|+-....+..+.+.+|+..--    ..++++.+...                 .-.|
T Consensus       330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f----~~i~~~d~v~~-----------------~~kP  388 (459)
T PRK06698        330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV----TETFSIEQINS-----------------LNKS  388 (459)
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc----ceeEecCCCCC-----------------CCCc
Confidence            68899999999999999999999999999999999999885321    12333333211                 1123


Q ss_pred             hhHHHHHHHHhhC-CCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGM-NEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~-g~~V~miGDG~ND~~a  267 (270)
                      +   -+...+++. -.-+.|+||..+|+.|
T Consensus       389 ~---~~~~al~~l~~~~~v~VGDs~~Di~a  415 (459)
T PRK06698        389 D---LVKSILNKYDIKEAAVVGDRLSDINA  415 (459)
T ss_pred             H---HHHHHHHhcCcceEEEEeCCHHHHHH
Confidence            2   122223221 2469999999999765

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=95.77  E-value=0.045  Score=50.96  Aligned_cols=43  Identities=14%  Similarity=0.076  Sum_probs=39.1

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      -++.+|+.++++.|++.|+++.++|+-....+..+-+..||..
T Consensus       215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~  257 (381)
T PLN02575        215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG  257 (381)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence            3578999999999999999999999999999999989999863

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=95.77  E-value=0.065  Score=43.87  Aligned_cols=72  Identities=21%  Similarity=0.319  Sum_probs=56.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ..-|++.+-+..++.+|+++.++|--+..-+...+..+|+.                               =|+--.-|
T Consensus        46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~-------------------------------fi~~A~KP   94 (175)
T COG2179          46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP-------------------------------FIYRAKKP   94 (175)
T ss_pred             CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc-------------------------------eeecccCc
Confidence            35688999999999999999999999898888999999986                               23333344


Q ss_pred             hhHHHHHHHHhhCC---CEEEEECCcH
Q psy885          239 AHKSKIVEFLQGMN---EISAMDSSTG  262 (270)
Q Consensus       239 ~~K~~iV~~lq~~g---~~V~miGDG~  262 (270)
                      --+ .+-+++++.+   .-|+||||-.
T Consensus        95 ~~~-~fr~Al~~m~l~~~~vvmVGDqL  120 (175)
T COG2179          95 FGR-AFRRALKEMNLPPEEVVMVGDQL  120 (175)
T ss_pred             cHH-HHHHHHHHcCCChhHEEEEcchh
Confidence            444 4778887764   5799999954

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=95.73  E-value=0.047  Score=48.87  Aligned_cols=38  Identities=29%  Similarity=0.426  Sum_probs=33.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI  196 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~  196 (270)
                      ++.|++.++++.|++.|+++.++|+-.......+-+..
T Consensus       144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~  181 (286)
T PLN02779        144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL  181 (286)
T ss_pred             CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence            68899999999999999999999998887777665554

>PLN02811 hydrolase

Probab=95.68  E-value=0.028  Score=48.02  Aligned_cols=32  Identities=19%  Similarity=0.184  Sum_probs=27.7

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHH
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATA  189 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta  189 (270)
                      -++.+++.++|+.|++.|+++.++||-.....
T Consensus        77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~  108 (220)
T PLN02811         77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHF  108 (220)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence            45789999999999999999999999776533

>PRK09449 dUMP phosphatase; Provisional

Probab=95.64  E-value=0.044  Score=46.65  Aligned_cols=40  Identities=15%  Similarity=0.214  Sum_probs=34.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ++.+++.++++.|+ .|+++.++|......+...-+..|+.
T Consensus        95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~  134 (224)
T PRK09449         95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR  134 (224)
T ss_pred             ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence            47899999999999 68999999998888887777778875

>PLN02940 riboflavin kinase

Probab=95.64  E-value=0.037  Score=51.65  Aligned_cols=86  Identities=12%  Similarity=0.088  Sum_probs=55.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR-RIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~-~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      ++.+++.++++.|++.|+++.|+|+-....+..... ..|+...-    ..++++.+..                  +..
T Consensus        93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F----d~ii~~d~v~------------------~~K  150 (382)
T PLN02940         93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF----SVIVGGDEVE------------------KGK  150 (382)
T ss_pred             CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC----CEEEehhhcC------------------CCC
Confidence            578999999999999999999999998887776554 56764211    1233332211                  112


Q ss_pred             hhhHHHHHHHHhhC---CCEEEEECCcHhhhhh
Q psy885          238 PAHKSKIVEFLQGM---NEISAMDSSTGKTELR  267 (270)
Q Consensus       238 P~~K~~iV~~lq~~---g~~V~miGDG~ND~~a  267 (270)
                      | +...+..++++.   ...++|+||+.+|+.|
T Consensus       151 P-~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~a  182 (382)
T PLN02940        151 P-SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMA  182 (382)
T ss_pred             C-CHHHHHHHHHHcCCChhHEEEEeCCHHHHHH
Confidence            2 112233444443   4568999999999754

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=95.63  E-value=0.059  Score=45.57  Aligned_cols=41  Identities=17%  Similarity=0.300  Sum_probs=36.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      ++.+++.++++.|++. +++.++|+-....+..+.+..|+..
T Consensus        97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~  137 (224)
T TIGR02254        97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP  137 (224)
T ss_pred             eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence            5789999999999999 9999999998888888888888853

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=95.63  E-value=0.056  Score=49.91  Aligned_cols=26  Identities=15%  Similarity=0.305  Sum_probs=24.2

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITG  183 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTG  183 (270)
                      -++.|++.++++.|++.|+++.|+|.
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN   54 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTN   54 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence            35789999999999999999999998

>TIGR01675 plant-AP plant acid phosphatase

Probab=95.52  E-value=0.17  Score=43.78  Aligned_cols=89  Identities=16%  Similarity=0.077  Sum_probs=55.3

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH---HHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEE
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI---CRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLF  233 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~i---A~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~  233 (270)
                      .-|.-+++.++++.|++.|++|+++||=.......+   -++.|+..-    ..+++.+..-..                
T Consensus       118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~LiLR~~~d~~----------------  177 (229)
T TIGR01675       118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----KHLILRGLEDSN----------------  177 (229)
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----CeeeecCCCCCC----------------
Confidence            458889999999999999999999999876542222   234676521    112222110000                


Q ss_pred             EecChhhHHHHHHHHhhCCC-EEEEECCcHhhhh
Q psy885          234 SRVEPAHKSKIVEFLQGMNE-ISAMDSSTGKTEL  266 (270)
Q Consensus       234 ar~tP~~K~~iV~~lq~~g~-~V~miGDG~ND~~  266 (270)
                       .....-|...-+.+.+.|+ +++.+||-.+|-.
T Consensus       178 -~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~  210 (229)
T TIGR01675       178 -KTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL  210 (229)
T ss_pred             -chHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence             0001116666667776665 6778999999953

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=95.46  E-value=0.2  Score=44.96  Aligned_cols=40  Identities=15%  Similarity=0.272  Sum_probs=37.0

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .-+.+.++|+.|++.||.+++.||=.......+.+++|+.
T Consensus        19 ~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~   58 (302)
T PRK12702         19 SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE   58 (302)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence            5567899999999999999999999999999999999985

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=95.45  E-value=0.066  Score=46.51  Aligned_cols=49  Identities=12%  Similarity=0.177  Sum_probs=38.2

Q ss_pred             EEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHhCCCC
Q psy885          152 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAE--AICRRIGVFT  200 (270)
Q Consensus       152 G~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~--~iA~~~gi~~  200 (270)
                      |.+.-...+-|++.++++.|+++|+++.++|.-....+.  ...+++|+..
T Consensus        17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~   67 (242)
T TIGR01459        17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA   67 (242)
T ss_pred             cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence            555566778999999999999999999999985544333  4557788863

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=95.22  E-value=0.15  Score=41.97  Aligned_cols=74  Identities=15%  Similarity=0.175  Sum_probs=58.6

Q ss_pred             cCCCchhHHHHHHHHHhCCCe--EEEEcCC-------CHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhc
Q psy885          157 LDPPRKEVFDSIARCRAAGIR--VIVITGD-------NKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAV  227 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~--v~mlTGD-------~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~  227 (270)
                      ++.+-++..+.+++|++.+..  ++++|=-       +...|..+++.+|+.                            
T Consensus        57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----------------------------  108 (168)
T PF09419_consen   57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP----------------------------  108 (168)
T ss_pred             cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----------------------------
Confidence            456788999999999999874  9999865       478899999999985                            


Q ss_pred             cCceEEE-ecChhhHHHHHHHHhhC-----CCEEEEECCc
Q psy885          228 ARARLFS-RVEPAHKSKIVEFLQGM-----NEISAMDSST  261 (270)
Q Consensus       228 ~~~~v~a-r~tP~~K~~iV~~lq~~-----g~~V~miGDG  261 (270)
                         .+.. ..-|.-..++.+.++.+     -+-++||||=
T Consensus       109 ---vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDr  145 (168)
T PF09419_consen  109 ---VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDR  145 (168)
T ss_pred             ---EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcch
Confidence               3323 35787777889988765     4569999994

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>smart00775 LNS2 LNS2 domain

Probab=95.12  E-value=0.18  Score=41.04  Aligned_cols=96  Identities=17%  Similarity=0.118  Sum_probs=60.6

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCccceeeec-hhhcCCCHHHHHHhc
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAE---AICRRI---G--VFTEEEDTTGKSYSG-REFDDLPLSEQKAAV  227 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~---~iA~~~---g--i~~~~~~~~~~~i~G-~~~~~l~~~~~~~~~  227 (270)
                      .+.+.+++.++++.+++.|++++++||=....+.   ....++   |  +..  .   .++..+ ..+..+.        
T Consensus        25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g---~li~~~g~~~~~~~--------   91 (157)
T smart00775       25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--G---PVLLSPDRLFAALH--------   91 (157)
T ss_pred             cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--c---eEEEcCCcchhhhh--------
Confidence            4678899999999999999999999998877764   333331   2  221  0   112221 1111111        


Q ss_pred             cCceEEEecChhhHHHHHHHHhh-----CCCEEEEECCcHhhhhh
Q psy885          228 ARARLFSRVEPAHKSKIVEFLQG-----MNEISAMDSSTGKTELR  267 (270)
Q Consensus       228 ~~~~v~ar~tP~~K~~iV~~lq~-----~g~~V~miGDG~ND~~a  267 (270)
                       + .+..+-.-+.|...++.+++     ....++..|++.+|+.|
T Consensus        92 -~-e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~  134 (157)
T smart00775       92 -R-EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVIS  134 (157)
T ss_pred             -c-ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHH
Confidence             1 22222223348888887776     35788889999999865

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.72  E-value=0.28  Score=42.13  Aligned_cols=39  Identities=18%  Similarity=0.288  Sum_probs=34.0

Q ss_pred             hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          162 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       162 ~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      +.+...+..|+++|++|+.+|.-....-...-+.+|+..
T Consensus        26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~   64 (274)
T COG3769          26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG   64 (274)
T ss_pred             CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence            346788999999999999999998888888889999873

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=94.61  E-value=0.12  Score=42.32  Aligned_cols=41  Identities=20%  Similarity=0.365  Sum_probs=31.7

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDN---------------KATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~---------------~~ta~~iA~~~gi~  199 (270)
                      ++-+++.++|+.|++.|+++.++|--.               ......+....|+.
T Consensus        29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~   84 (161)
T TIGR01261        29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII   84 (161)
T ss_pred             eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc
Confidence            367899999999999999999999742               33455566667764

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=94.43  E-value=0.067  Score=45.11  Aligned_cols=29  Identities=24%  Similarity=0.334  Sum_probs=25.7

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCH
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNK  186 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~  186 (270)
                      -++.|++.++++.|++.|+++.++|....
T Consensus        93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~  121 (211)
T TIGR02247        93 TKLRPSMMAAIKTLRAKGFKTACITNNFP  121 (211)
T ss_pred             cccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence            35789999999999999999999998654

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=94.29  E-value=0.18  Score=43.39  Aligned_cols=41  Identities=10%  Similarity=0.132  Sum_probs=34.1

Q ss_pred             ecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q psy885          156 MLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI  196 (270)
Q Consensus       156 ~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~  196 (270)
                      +.-++.+++.++++.|++.|+++.++|.........+-+..
T Consensus        92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~  132 (220)
T TIGR01691        92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS  132 (220)
T ss_pred             cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence            44578999999999999999999999998877666655444

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=93.97  E-value=0.42  Score=39.29  Aligned_cols=26  Identities=15%  Similarity=0.337  Sum_probs=23.8

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDN  185 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~  185 (270)
                      +.|++.++|+.|++.|+++.++|.-.
T Consensus        27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~   52 (176)
T TIGR00213        27 FIDGVIDALRELKKMGYALVLVTNQS   52 (176)
T ss_pred             ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence            57899999999999999999999765

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=93.79  E-value=0.24  Score=40.65  Aligned_cols=40  Identities=15%  Similarity=0.250  Sum_probs=31.1

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHhCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKA------------TAEAICRRIGVF  199 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~------------ta~~iA~~~gi~  199 (270)
                      +-+++.++++.|++.|+++.++|.-...            ....+.+.+|+.
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~   94 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP   94 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence            3499999999999999999999964432            345566777774

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01686 FkbH FkbH-like domain

Probab=93.52  E-value=0.38  Score=43.70  Aligned_cols=81  Identities=11%  Similarity=0.159  Sum_probs=57.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----hCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR----IGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~----~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      ++.+++.++|+.|++.|+.+.++|.-....|..+-+.    +|+...-.                           .+  
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~---------------------------~~--   81 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD---------------------------AR--   81 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee---------------------------EE--
Confidence            4589999999999999999999999999999988877    66542100                           11  


Q ss_pred             ecChhhHHHHHHHH-hhC---CCEEEEECCcHhhhhhh
Q psy885          235 RVEPAHKSKIVEFL-QGM---NEISAMDSSTGKTELRI  268 (270)
Q Consensus       235 r~tP~~K~~iV~~l-q~~---g~~V~miGDG~ND~~ai  268 (270)
                      ...+.-|...+..+ ++.   -.-++|+||...|+.+.
T Consensus        82 ~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~  119 (320)
T TIGR01686        82 SINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANV  119 (320)
T ss_pred             EEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHH
Confidence            12233455544443 333   36799999999997653

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=92.80  E-value=0.42  Score=39.32  Aligned_cols=38  Identities=26%  Similarity=0.373  Sum_probs=32.7

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ++.+++.++++.|+   .+++++|.-....+..+.+..|+.
T Consensus        84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~  121 (184)
T TIGR01993        84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE  121 (184)
T ss_pred             CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence            47799999999997   579999998888888888888885

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=92.64  E-value=1  Score=39.09  Aligned_cols=41  Identities=22%  Similarity=0.387  Sum_probs=37.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+.+.+.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus        16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   56 (256)
T TIGR00099        16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD   56 (256)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            47788999999999999999999999999999999998875

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=92.55  E-value=1.3  Score=38.55  Aligned_cols=41  Identities=24%  Similarity=0.456  Sum_probs=37.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+.+.+.++|+++++.|+++++.||=....+..+.+++++.
T Consensus        20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (272)
T PRK10530         20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD   60 (272)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence            47788999999999999999999999999999999999875

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=92.35  E-value=0.48  Score=50.03  Aligned_cols=41  Identities=17%  Similarity=0.327  Sum_probs=37.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+.+++.++++.|+++|+++.++|+-....+..+-+..|+.
T Consensus       161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~  201 (1057)
T PLN02919        161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP  201 (1057)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence            36799999999999999999999999988888888888885

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=92.21  E-value=0.27  Score=41.72  Aligned_cols=39  Identities=8%  Similarity=0.109  Sum_probs=32.0

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      -++.+++.++++.|   ++++.++|+.....+..+-+..|+.
T Consensus        87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~  125 (221)
T PRK10563         87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML  125 (221)
T ss_pred             CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence            45678999999988   5999999999888777776777775

>PHA02597 30

Probab=92.15  E-value=0.82  Score=37.99  Aligned_cols=85  Identities=8%  Similarity=0.080  Sum_probs=47.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++.+ +.+++|.-+..+....-+.+|+..-.......                      .+.++...
T Consensus        74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~----------------------i~~~~~~~  130 (197)
T PHA02597         74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSE----------------------VLMCGHDE  130 (197)
T ss_pred             cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccE----------------------EEEeccCc
Confidence            47899999999999875 56677764444444344555553210000011                      22222222


Q ss_pred             hhHHHHHH-HHhhCC-CEEEEECCcHhhhhh
Q psy885          239 AHKSKIVE-FLQGMN-EISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~-~lq~~g-~~V~miGDG~ND~~a  267 (270)
                      . |-+++. ++++.| ..++|+||..+|+.|
T Consensus       131 ~-kp~~~~~a~~~~~~~~~v~vgDs~~di~a  160 (197)
T PHA02597        131 S-KEKLFIKAKEKYGDRVVCFVDDLAHNLDA  160 (197)
T ss_pred             c-cHHHHHHHHHHhCCCcEEEeCCCHHHHHH
Confidence            1 233333 344444 458899999999655

2 hypothetical protein; Provisional

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=91.81  E-value=0.59  Score=40.36  Aligned_cols=42  Identities=14%  Similarity=0.067  Sum_probs=34.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE  201 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~  201 (270)
                      .+-|++.++++.|+.. +..+++|--..+-+..+|.-+|+...
T Consensus        83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg  124 (315)
T COG4030          83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRG  124 (315)
T ss_pred             ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCcc
Confidence            3569999999999865 56677777788899999999999654

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=91.30  E-value=0.22  Score=40.64  Aligned_cols=43  Identities=12%  Similarity=0.075  Sum_probs=37.9

Q ss_pred             ecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          156 MLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       156 ~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      +.=..||++.+.++.|.+. +.+++.|-.....|..+...++..
T Consensus        39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~   81 (162)
T TIGR02251        39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG   81 (162)
T ss_pred             EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence            3345799999999999987 999999999999999999988864

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=91.28  E-value=2.1  Score=36.18  Aligned_cols=87  Identities=16%  Similarity=0.259  Sum_probs=60.5

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEE-Eec
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLF-SRV  236 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~-ar~  236 (270)
                      ..+-+.+.++|+.|+++|+++++.||-....+..+..++++...     ....+|.-+..-..         -.++ ...
T Consensus        14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~-----~I~~nGa~i~~~~~---------~~l~~~~i   79 (254)
T PF08282_consen   14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDY-----FICSNGALIDDPKG---------KILYEKPI   79 (254)
T ss_dssp             SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSE-----EEEGGGTEEEETTT---------EEEEEESB
T ss_pred             CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhh-----hcccccceeeeccc---------ccchhhhe
Confidence            34678999999999999999999999999999999999998622     23344444411100         0233 345


Q ss_pred             ChhhHHHHHHHHhhCCCEEEEE
Q psy885          237 EPAHKSKIVEFLQGMNEISAMD  258 (270)
Q Consensus       237 tP~~K~~iV~~lq~~g~~V~mi  258 (270)
                      +++.-..+++.+++.+..+.+.
T Consensus        80 ~~~~~~~i~~~~~~~~~~~~~~  101 (254)
T PF08282_consen   80 DSDDVKKILKYLKEHNISFFFY  101 (254)
T ss_dssp             -HHHHHHHHHHHHHTTCEEEEE
T ss_pred             eccchhheeehhhhcccccccc
Confidence            6677778888888876544443

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=91.28  E-value=0.75  Score=38.38  Aligned_cols=90  Identities=16%  Similarity=0.184  Sum_probs=59.9

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHH---HHHHhc--cCceEEE
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLS---EQKAAV--ARARLFS  234 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~---~~~~~~--~~~~v~a  234 (270)
                      +.+++.+++..|+++|++++|+|=           |.||...       .+++.+|..+...   .+...-  -....+|
T Consensus        32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg-------yf~~~~f~~~~~~m~~~l~~~gv~id~i~~C   93 (181)
T COG0241          32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG-------YFTEADFDKLHNKMLKILASQGVKIDGILYC   93 (181)
T ss_pred             cCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc-------CccHHHHHHHHHHHHHHHHHcCCccceEEEC
Confidence            568999999999999999999995           5566532       3444555443222   111111  1235666


Q ss_pred             ecChhh--------HHHHHHHHhhCC---CEEEEECCcHhhhhh
Q psy885          235 RVEPAH--------KSKIVEFLQGMN---EISAMDSSTGKTELR  267 (270)
Q Consensus       235 r~tP~~--------K~~iV~~lq~~g---~~V~miGDG~ND~~a  267 (270)
                      ...|++        ...+.+++++.+   ....||||-..|..+
T Consensus        94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~  137 (181)
T COG0241          94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQA  137 (181)
T ss_pred             CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHH
Confidence            666664        566777777765   678899999999654

>KOG3120|consensus

Probab=91.01  E-value=1.4  Score=37.96  Aligned_cols=41  Identities=20%  Similarity=0.287  Sum_probs=35.0

Q ss_pred             CCchhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGI-RVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi-~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      |+-|+..++|+.+++.|- .+++||--|...-..+-+..||-
T Consensus        84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~  125 (256)
T KOG3120|consen   84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH  125 (256)
T ss_pred             CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence            567899999999999996 99999999988877777777764

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=90.90  E-value=1.1  Score=37.49  Aligned_cols=32  Identities=28%  Similarity=0.466  Sum_probs=27.7

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHH
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAE  190 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~  190 (270)
                      ++.|++.++++.|++.|+++.++|.-......
T Consensus        84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~  115 (199)
T PRK09456         84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT  115 (199)
T ss_pred             ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHH
Confidence            57999999999999999999999987655443

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=90.53  E-value=1.3  Score=38.42  Aligned_cols=88  Identities=15%  Similarity=0.080  Sum_probs=54.9

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCCCCCCCccceeeechhh-cCCCHHHHHHhccCceEE
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDN---KATAEAICRRIGVFTEEEDTTGKSYSGREF-DDLPLSEQKAAVARARLF  233 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~---~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~-~~l~~~~~~~~~~~~~v~  233 (270)
                      ++.=|++.+.++.+++.|++|+.|||=.   ...+..=-++.|+...+    .+++.+..- ...               
T Consensus       114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~----~l~lr~~~~~~~~---------------  174 (229)
T PF03767_consen  114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWD----HLILRPDKDPSKK---------------  174 (229)
T ss_dssp             GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBS----CGEEEEESSTSS----------------
T ss_pred             CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccc----hhccccccccccc---------------
Confidence            4667889999999999999999999843   22333333566765321    122222111 000               


Q ss_pred             EecChhhHHHHHHHHhhCC-CEEEEECCcHhhhh
Q psy885          234 SRVEPAHKSKIVEFLQGMN-EISAMDSSTGKTEL  266 (270)
Q Consensus       234 ar~tP~~K~~iV~~lq~~g-~~V~miGDG~ND~~  266 (270)
                        ...+-|...-+.+++.| ++++++||-.+|..
T Consensus       175 --~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~  206 (229)
T PF03767_consen  175 --SAVEYKSERRKEIEKKGYRIIANIGDQLSDFS  206 (229)
T ss_dssp             -------SHHHHHHHHHTTEEEEEEEESSGGGCH
T ss_pred             --cccccchHHHHHHHHcCCcEEEEeCCCHHHhh
Confidence              01234888888888886 56778999999954

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=90.50  E-value=2.8  Score=36.75  Aligned_cols=41  Identities=17%  Similarity=0.225  Sum_probs=38.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+.+.+.++|++|++.|+++++.||=....+..+.+++|+.
T Consensus        19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   59 (272)
T PRK15126         19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD   59 (272)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence            47889999999999999999999999999999999999985

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=90.16  E-value=0.61  Score=39.67  Aligned_cols=40  Identities=28%  Similarity=0.356  Sum_probs=37.5

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      +.+.+.++|++|++.|+++++.||=....+..+++.+|+.
T Consensus        21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (230)
T PRK01158         21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS   60 (230)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence            7789999999999999999999999999999999999975

>PLN02645 phosphoglycolate phosphatase

Probab=89.78  E-value=0.79  Score=41.45  Aligned_cols=48  Identities=17%  Similarity=0.270  Sum_probs=39.5

Q ss_pred             EEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCC
Q psy885          152 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAIC---RRIGVF  199 (270)
Q Consensus       152 G~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA---~~~gi~  199 (270)
                      |++.-.+.+=+++.++|+.|++.|++++++|+....+...++   +.+|+.
T Consensus        37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~   87 (311)
T PLN02645         37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN   87 (311)
T ss_pred             CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence            556666677799999999999999999999999977766666   557775

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=89.37  E-value=0.77  Score=39.51  Aligned_cols=42  Identities=12%  Similarity=0.237  Sum_probs=37.5

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      +..-+.+.++|+.|++.|++++++||=....+..+++++|+.
T Consensus        14 ~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~   55 (225)
T TIGR02461        14 GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE   55 (225)
T ss_pred             CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            445567999999999999999999999999999999999974

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=89.11  E-value=0.21  Score=37.39  Aligned_cols=49  Identities=18%  Similarity=0.356  Sum_probs=35.3

Q ss_pred             EEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCCC
Q psy885          152 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAIC---RRIGVFT  200 (270)
Q Consensus       152 G~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA---~~~gi~~  200 (270)
                      |++...+.+=|++.++|+.|++.|++++++|-....+...++   +.+|+.-
T Consensus         7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~   58 (101)
T PF13344_consen    7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV   58 (101)
T ss_dssp             TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred             cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence            445556778899999999999999999999987755544444   5678763

...

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=88.54  E-value=6.1  Score=35.17  Aligned_cols=42  Identities=19%  Similarity=0.399  Sum_probs=32.3

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHhCCC
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKA----TAEAICRRIGVF  199 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~----ta~~iA~~~gi~  199 (270)
                      ..|.=|++.+..+.+++.|++|+.|||=...    |..++ ++.|+.
T Consensus       143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~  188 (275)
T TIGR01680       143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYH  188 (275)
T ss_pred             cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCC
Confidence            5677789999999999999999999997643    33333 245765

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=88.36  E-value=0.97  Score=39.39  Aligned_cols=40  Identities=23%  Similarity=0.280  Sum_probs=36.4

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .-+.+.++|+.|++.|++++++||-....+..+.+++|+.
T Consensus        17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~   56 (256)
T TIGR01486        17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE   56 (256)
T ss_pred             CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            3456899999999999999999999999999999999975

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=88.32  E-value=0.99  Score=39.80  Aligned_cols=42  Identities=19%  Similarity=0.246  Sum_probs=38.3

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ..+.+.+.++|+.|++.|++++++||-....+..+++++|+.
T Consensus        20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~   61 (273)
T PRK00192         20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE   61 (273)
T ss_pred             CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            346678999999999999999999999999999999999985

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=88.12  E-value=1.6  Score=35.81  Aligned_cols=39  Identities=23%  Similarity=0.280  Sum_probs=32.1

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      +-|+ .+++..|++. +++.++|+.....+..+-+..|+..
T Consensus        89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~  127 (188)
T PRK10725         89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRR  127 (188)
T ss_pred             CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHh
Confidence            3454 5889999865 8999999999999999888999853

>TIGR01684 viral_ppase viral phosphatase

Probab=87.94  E-value=1.2  Score=40.14  Aligned_cols=53  Identities=13%  Similarity=0.168  Sum_probs=42.5

Q ss_pred             Cc-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhc
Q psy885          160 PR-KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFD  216 (270)
Q Consensus       160 lr-~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~  216 (270)
                      +| |++.++++.|++.|+++.++|+-....+...-+.+||..--    ..+++|.+..
T Consensus       146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YF----dvIIs~Gdv~  199 (301)
T TIGR01684       146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYF----DIIISGGHKA  199 (301)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCccc----CEEEECCccc
Confidence            56 99999999999999999999998888888888999997421    2355555443

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=87.64  E-value=1.2  Score=40.05  Aligned_cols=41  Identities=15%  Similarity=0.173  Sum_probs=36.5

Q ss_pred             Cc-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          160 PR-KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       160 lr-~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      +| |++.++++.|+++|+++.++|+.....+..+.+.+|+..
T Consensus       148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~  189 (303)
T PHA03398        148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG  189 (303)
T ss_pred             cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence            46 999999999999999999999777788888889999963

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=87.62  E-value=2.8  Score=37.09  Aligned_cols=49  Identities=16%  Similarity=0.204  Sum_probs=35.5

Q ss_pred             EEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHhCCCC
Q psy885          152 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEA---ICRRIGVFT  200 (270)
Q Consensus       152 G~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~---iA~~~gi~~  200 (270)
                      |++.-.+.+-+++.++|+.|++.|++++++|+-...+...   --+.+|+..
T Consensus        11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~   62 (279)
T TIGR01452        11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG   62 (279)
T ss_pred             CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence            4444556677889999999999999999999965333322   235578753

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK10976 putative hydrolase; Provisional

Probab=87.54  E-value=1.1  Score=39.02  Aligned_cols=41  Identities=15%  Similarity=0.186  Sum_probs=37.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+.+.+.++|+++++.|+++++.||=....+..+.+.+|+.
T Consensus        19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   59 (266)
T PRK10976         19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK   59 (266)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence            47788999999999999999999999999999999999875

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=87.08  E-value=1.3  Score=38.78  Aligned_cols=41  Identities=24%  Similarity=0.298  Sum_probs=38.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+-+.+.++|++|++.|+++++.||=....+..+.+++|+.
T Consensus        20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (270)
T PRK10513         20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME   60 (270)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence            57888999999999999999999999999999999999974

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=86.54  E-value=1.5  Score=37.02  Aligned_cols=41  Identities=24%  Similarity=0.477  Sum_probs=37.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+.+.+.++|+.|++.|+.+++.||=....+..+++.+|+.
T Consensus        15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~   55 (225)
T TIGR01482        15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP   55 (225)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence            36788899999999999999999999999999999999854

catalyze the same reaction as SPP.

>PRK10444 UMP phosphatase; Provisional

Probab=86.25  E-value=0.85  Score=39.94  Aligned_cols=48  Identities=19%  Similarity=0.246  Sum_probs=41.3

Q ss_pred             EEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---hCCC
Q psy885          152 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR---IGVF  199 (270)
Q Consensus       152 G~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~---~gi~  199 (270)
                      |++.-.+.+-|++.++|+.|++.|++++++|+....+...++++   +|+.
T Consensus        10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~   60 (248)
T PRK10444         10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD   60 (248)
T ss_pred             CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence            66666778889999999999999999999999998888877776   4664

>PLN02887 hydrolase family protein

Probab=85.83  E-value=5.5  Score=39.35  Aligned_cols=48  Identities=13%  Similarity=0.241  Sum_probs=40.9

Q ss_pred             EEEeecC-CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          152 GVVGMLD-PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       152 G~i~~~d-~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      |.+.-.| .+-+.+.++|+.+++.|+++++.||=....+..+.+++++.
T Consensus       317 GTLLn~d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~  365 (580)
T PLN02887        317 GTLLNSKSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA  365 (580)
T ss_pred             CCCCCCCCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence            4444333 48899999999999999999999999999999999999874

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=85.78  E-value=0.73  Score=39.05  Aligned_cols=30  Identities=10%  Similarity=-0.022  Sum_probs=22.3

Q ss_pred             hHHHHHHHHhh-C---CCEEEEECCcHhhhhhhc
Q psy885          240 HKSKIVEFLQG-M---NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       240 ~K~~iV~~lq~-~---g~~V~miGDG~ND~~ai~  269 (270)
                      .|..-++.+.+ .   ..-|+++||+.||..|+-
T Consensus       179 ~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~  212 (221)
T TIGR02463       179 SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLE  212 (221)
T ss_pred             CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHH
Confidence            46666666543 2   356999999999999974

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=85.52  E-value=1.8  Score=36.61  Aligned_cols=38  Identities=26%  Similarity=0.369  Sum_probs=35.2

Q ss_pred             hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          162 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       162 ~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      +.+.++|+.|++.|++++++||=....+..+.+.+|+.
T Consensus        19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            44889999999999999999999999999999999985

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=85.39  E-value=1.2  Score=39.02  Aligned_cols=49  Identities=22%  Similarity=0.308  Sum_probs=37.4

Q ss_pred             EEEeecCC----CchhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCC
Q psy885          152 GVVGMLDP----PRKEVFDSIARCRAAGIRVIVITGDNKAT---AEAICRRIGVFT  200 (270)
Q Consensus       152 G~i~~~d~----lr~~~~~~I~~l~~agi~v~mlTGD~~~t---a~~iA~~~gi~~  200 (270)
                      |.+.-.+.    +-|++.++|+.|++.|++++++||....+   .....+.+|+.-
T Consensus        10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~   65 (257)
T TIGR01458        10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI   65 (257)
T ss_pred             CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            55555565    78899999999999999999999876655   444445678753

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=84.19  E-value=2.3  Score=37.11  Aligned_cols=50  Identities=8%  Similarity=0.046  Sum_probs=38.9

Q ss_pred             EEEeecCCCchhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCCCC
Q psy885          152 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITG---DNKATAEAICRRIGVFTE  201 (270)
Q Consensus       152 G~i~~~d~lr~~~~~~I~~l~~agi~v~mlTG---D~~~ta~~iA~~~gi~~~  201 (270)
                      |++.-.+.+-+++.++|+.|++.|++++++||   -.........+.+|+...
T Consensus        10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~   62 (249)
T TIGR01457        10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT   62 (249)
T ss_pred             CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence            44445566678999999999999999999997   456666666777887643

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=84.18  E-value=2.1  Score=36.95  Aligned_cols=28  Identities=14%  Similarity=0.213  Sum_probs=23.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHH
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKA  187 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~  187 (270)
                      ++-|++.++++.|++. +++.++|..+..
T Consensus       113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~  140 (238)
T PRK10748        113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ  140 (238)
T ss_pred             CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence            5668999999999975 999999886554

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=83.59  E-value=0.79  Score=37.17  Aligned_cols=80  Identities=11%  Similarity=0.136  Sum_probs=48.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++       ++.++|.-.......+.+..|+...-    ..++++.+..                  ...|
T Consensus        90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~v~~~~~~~------------------~~KP  140 (175)
T TIGR01493        90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF----DRAFSVDTVR------------------AYKP  140 (175)
T ss_pred             CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH----hhhccHhhcC------------------CCCC
Confidence            57899999997       36788988888888888888875211    1122222211                  1122


Q ss_pred             hhH--HHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHK--SKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K--~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      .-.  ....+.+.-...-++||||...|+.+
T Consensus       141 ~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~  171 (175)
T TIGR01493       141 DPVVYELVFDTVGLPPDRVLMVAAHQWDLIG  171 (175)
T ss_pred             CHHHHHHHHHHHCCCHHHeEeEecChhhHHH
Confidence            222  23333333233569999999999754

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=83.46  E-value=2.4  Score=37.25  Aligned_cols=40  Identities=18%  Similarity=0.230  Sum_probs=36.6

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      +-+.+.++|++|++.|+++++.||=....+..+++++|+.
T Consensus        25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~   64 (271)
T PRK03669         25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence            4567889999999999999999999999999999999984

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=83.41  E-value=4.1  Score=35.87  Aligned_cols=30  Identities=13%  Similarity=0.056  Sum_probs=23.6

Q ss_pred             hHHHHHHHHhh----CC-CEEEEECCcHhhhhhhc
Q psy885          240 HKSKIVEFLQG----MN-EISAMDSSTGKTELRIF  269 (270)
Q Consensus       240 ~K~~iV~~lq~----~g-~~V~miGDG~ND~~ai~  269 (270)
                      .|..-++.+.+    .. .-|+++||+.||..|+.
T Consensus       190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~  224 (273)
T PRK00192        190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLE  224 (273)
T ss_pred             CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHH
Confidence            67777777653    24 78999999999999874

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=83.10  E-value=7  Score=32.83  Aligned_cols=42  Identities=17%  Similarity=0.340  Sum_probs=35.0

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .=++-+++.++++.++.. +++.++|=-....+....+++||.
T Consensus        97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~  138 (229)
T COG1011          97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL  138 (229)
T ss_pred             hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh
Confidence            346778899999999988 999999987777778888899965

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=83.04  E-value=1.4  Score=38.89  Aligned_cols=35  Identities=11%  Similarity=-0.023  Sum_probs=26.0

Q ss_pred             ecCh--hhHHHHHHHHhh-------CCCEEEEECCcHhhhhhhc
Q psy885          235 RVEP--AHKSKIVEFLQG-------MNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       235 r~tP--~~K~~iV~~lq~-------~g~~V~miGDG~ND~~ai~  269 (270)
                      .++|  -.|..=++.|.+       ....|+++|||.||..||.
T Consensus       180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~  223 (271)
T PRK03669        180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLD  223 (271)
T ss_pred             EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHH
Confidence            4455  478877777644       2356999999999999984

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=83.00  E-value=7.9  Score=35.69  Aligned_cols=99  Identities=10%  Similarity=0.114  Sum_probs=61.5

Q ss_pred             chhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh-CCCCCCC---Cccceeeech----------hhcCCCHH----H
Q psy885          161 RKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI-GVFTEEE---DTTGKSYSGR----------EFDDLPLS----E  222 (270)
Q Consensus       161 r~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~-gi~~~~~---~~~~~~i~G~----------~~~~l~~~----~  222 (270)
                      -|++.++++.|+++|+++.++|.-....+..+.+.+ |-.....   ..-..++++.          .|..+..+    .
T Consensus       186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~  265 (343)
T TIGR02244       186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK  265 (343)
T ss_pred             chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence            579999999999999999999999999999988885 6111000   0112333333          12111110    0


Q ss_pred             HHH--hccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcH
Q psy885          223 QKA--AVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTG  262 (270)
Q Consensus       223 ~~~--~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~  262 (270)
                      ...  .+++..||+.-+-.+   +-+.+.-.+..|+++||-+
T Consensus       266 ~~~~~~l~~g~vY~gGn~~~---~~~~l~~~~~~vlYvGD~i  304 (343)
T TIGR02244       266 WGEVDGLEPGKVYSGGSLKQ---FHELLKWRGKEVLYFGDHI  304 (343)
T ss_pred             CCccccccCCCeEeCCCHHH---HHHHHCCCCCcEEEECCcc
Confidence            000  134556777666543   4445556788999999954

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=82.96  E-value=4.7  Score=40.89  Aligned_cols=39  Identities=28%  Similarity=0.379  Sum_probs=32.5

Q ss_pred             CCchhHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHhC
Q psy885          159 PPRKEVFDSIARCRA-AGIRVIVITGDNKATAEAICRRIG  197 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~-agi~v~mlTGD~~~ta~~iA~~~g  197 (270)
                      .+-+++.++|+.|.+ .|+.|+++||-............+
T Consensus       514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~  553 (726)
T PRK14501        514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLP  553 (726)
T ss_pred             CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence            367899999999999 699999999999988877655444

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=80.78  E-value=4.1  Score=39.76  Aligned_cols=40  Identities=25%  Similarity=0.380  Sum_probs=31.3

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHhCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNK------------ATAEAICRRIGVF  199 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~------------~ta~~iA~~~gi~  199 (270)
                      +-+++.+.|+.|++.|++++|+|-=..            ..+..+.+++|+.
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip  249 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP  249 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence            469999999999999999999996333            3355667777763

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=80.07  E-value=1.2  Score=37.68  Aligned_cols=31  Identities=10%  Similarity=-0.070  Sum_probs=24.0

Q ss_pred             hhHHHHHHHHhhC-C---CEEEEECCcHhhhhhhc
Q psy885          239 AHKSKIVEFLQGM-N---EISAMDSSTGKTELRIF  269 (270)
Q Consensus       239 ~~K~~iV~~lq~~-g---~~V~miGDG~ND~~ai~  269 (270)
                      ..|..-++.+.+. |   .-|+++||+.||..|+.
T Consensus       148 ~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~  182 (225)
T TIGR01482       148 VNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFE  182 (225)
T ss_pred             CCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHH
Confidence            3777778777543 3   46999999999999874

catalyze the same reaction as SPP.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	270
3tlm_A	992	Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp		1e-63
3ba6_A	994	Structure Of The Ca2e1p Phosphoenzyme Intermediate		2e-62
2dqs_A	995	Crystal Structure Of The Calcium Pump With Amppcp I		2e-62
1kju_A	994	Ca2+-Atpase In The E2 State Length = 994		2e-62
3ixz_A	1034	Pig Gastric H+K+-Atpase Complexed With Aluminium Fl		5e-16
3b8e_A	998	Crystal Structure Of The Sodium-Potassium Pump Leng		1e-15
3n23_A	992	Crystal Structure Of The High Affinity Complex Betw		1e-15
2zxe_A	1028	Crystal Structure Of The Sodium - Potassium Pump In		5e-15
3b8c_A	885	Crystal Structure Of A Plasma Membrane Proton Pump		4e-09
1mhs_A	920	Model Of Neurospora Crassa Proton Atpase Length = 9		3e-07

>pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992

Iteration: 1
 Score =  239 bits (610), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 131/243 (53%), Positives = 159/243 (65%), Gaps = 17/243 (6%)
Query: 25  RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVL 84
           + E+A A    +    KKEFTLEFSRDRKSMS YC+              FVKGAPEGV+
Sbjct: 464 KVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNKM--FVKGAPEGVI 521
Query: 85  ERCTHARIGSQKVSL------KDFSA----NTRFENLRSLEPKSKVSAIVPWGMKPEDMN 134
           +RC + R+G+ +V +      K  S      T  + LR L   ++ +       K E+M 
Sbjct: 522 DRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTP-----PKREEMV 576
Query: 135 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR 194
           L DSTKF  YE +LTFVGVVGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICR
Sbjct: 577 LDDSTKFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICR 636
Query: 195 RIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEI 254
           RIG+F E ED   ++Y+GREFDDLPL+EQ+ A  RA  F+RVEP HKSKIVE+LQ  +EI
Sbjct: 637 RIGIFGENEDVADRAYTGREFDDLPLAEQREACRRACCFARVEPTHKSKIVEYLQSFDEI 696
Query: 255 SAM 257
           +AM
Sbjct: 697 TAM 699

>pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994

Iteration: 1
 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 128/241 (53%), Positives = 159/241 (65%), Gaps = 16/241 (6%)
Query: 27  EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLER 86
           E+A A    +    KKEFTLEFSRDRKSMS YC+              FVKGAPEGV++R
Sbjct: 466 ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKM-FVKGAPEGVIDR 524
Query: 87  CTHARIGSQKVSL------KDFSA----NTRFENLRSLEPKSKVSAIVPWGMKPEDMNLA 136
           C + R+G+ +V +      K  S      T  + LR L   ++ +       K E+M L 
Sbjct: 525 CNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTP-----PKREEMVLD 579
Query: 137 DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 196
           DS++F  YE +LTFVGVVGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICRRI
Sbjct: 580 DSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI 639
Query: 197 GVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISA 256
           G+F E E+   ++Y+GREFDDLPL+EQ+ A  RA  F+RVEP+HKSKIVE+LQ  +EI+A
Sbjct: 640 GIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITA 699
Query: 257 M 257
           M
Sbjct: 700 M 700

>pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995

Iteration: 1
 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 128/241 (53%), Positives = 159/241 (65%), Gaps = 16/241 (6%)
Query: 27  EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLER 86
           E+A A    +    KKEFTLEFSRDRKSMS YC+              FVKGAPEGV++R
Sbjct: 467 ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKM-FVKGAPEGVIDR 525
Query: 87  CTHARIGSQKVSL------KDFSA----NTRFENLRSLEPKSKVSAIVPWGMKPEDMNLA 136
           C + R+G+ +V +      K  S      T  + LR L   ++ +       K E+M L 
Sbjct: 526 CNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTP-----PKREEMVLD 580
Query: 137 DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 196
           DS++F  YE +LTFVGVVGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICRRI
Sbjct: 581 DSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI 640
Query: 197 GVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISA 256
           G+F E E+   ++Y+GREFDDLPL+EQ+ A  RA  F+RVEP+HKSKIVE+LQ  +EI+A
Sbjct: 641 GIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITA 700
Query: 257 M 257
           M
Sbjct: 701 M 701

>pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994

Iteration: 1
 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 128/241 (53%), Positives = 159/241 (65%), Gaps = 16/241 (6%)
Query: 27  EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLER 86
           E+A A    +    KKEFTLEFSRDRKSMS YC+              FVKGAPEGV++R
Sbjct: 466 ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKM-FVKGAPEGVIDR 524
Query: 87  CTHARIGSQKVSL------KDFSA----NTRFENLRSLEPKSKVSAIVPWGMKPEDMNLA 136
           C + R+G+ +V +      K  S      T  + LR L   ++ +       K E+M L 
Sbjct: 525 CNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTP-----PKREEMVLD 579
Query: 137 DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 196
           DS++F  YE +LTFVGVVGMLDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICRRI
Sbjct: 580 DSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI 639
Query: 197 GVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISA 256
           G+F E E+   ++Y+GREFDDLPL+EQ+ A  RA  F+RVEP+HKSKIVE+LQ  +EI+A
Sbjct: 640 GIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITA 699
Query: 257 M 257
           M
Sbjct: 700 M 700

>pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 76  VKGAPEGVLERCTHARIGSQKVSLKDF---SANTRFENLRSLEPK---------SKVSAI 123
           +KGAPE VLERC+   I  Q++ L +    +  T + +L  L  +         S+    
Sbjct: 517 MKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYP 576
Query: 124 VPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITG 183
             +    E MN   S         L+F G+V M+DPPR  V D++ +CR AGIRVI++TG
Sbjct: 577 PGYAFDVEAMNFPTS--------GLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTG 628
Query: 184 DNKATAEAICRRIGVFTE--------------------EEDTTGKSYSGREFDDLPLSEQ 223
           D+  TA+AI   +G+ +E                     +D      +G +  D+  SE 
Sbjct: 629 DHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSEL 688
Query: 224 KAAVARA--RLFSRVEPAHKSKIVEFLQGMNEISAM 257
             A+      +F+R  P  K  IVE  Q +  I A+
Sbjct: 689 VEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAV 724

>pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 34/212 (16%)
Query: 76  VKGAPEGVLERCT----HARIGSQKVSLKDFSANTRFENLRSLEPKSK--VSAIVPWGMK 129
           +KGAPE +L+RC+    H +       LKD   N   E L  L  +        +P    
Sbjct: 482 MKGAPERILDRCSSILIHGKEQPLDEELKDAFQNAYLE-LGGLGERVLGFCHLFLPDEQF 540
Query: 130 PEDMNL-ADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKAT 188
           PE      D   F     NL FVG++ M+DPPR  V D++ +CR+AGI+VI++TGD+  T
Sbjct: 541 PEGFQFDTDDVNFPLD--NLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 598
Query: 189 AEAICRRIGVFTEEEDTT--------------------GKSYSGREFDDLPLSEQKAAVA 228
           A+AI + +G+ +E  +T                          G +  D+  SEQ   + 
Sbjct: 599 AKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT-SEQLDDIL 657
Query: 229 RAR---LFSRVEPAHKSKIVEFLQGMNEISAM 257
           +     +F+R  P  K  IVE  Q    I A+
Sbjct: 658 KYHTEIVFARTSPQQKLIIVEGCQRQGAIVAV 689

>pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 34/212 (16%)
Query: 76  VKGAPEGVLERCT----HARIGSQKVSLKDFSANTRFENLRSLEPKSK--VSAIVPWGMK 129
           +KGAPE +L+RC+    H +       LKD   N   E L  L  +        +P    
Sbjct: 476 MKGAPERILDRCSSILIHGKEQPLDEELKDAFQNAYLE-LGGLGERVLGFCHLFLPDEQF 534
Query: 130 PEDMNL-ADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKAT 188
           PE      D   F     NL FVG++ M+DPPR  V D++ +CR+AGI+VI++TGD+  T
Sbjct: 535 PEGFQFDTDDVNFPLD--NLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 592
Query: 189 AEAICRRIGVFTEEEDTT--------------------GKSYSGREFDDLPLSEQKAAVA 228
           A+AI + +G+ +E  +T                          G +  D+  SEQ   + 
Sbjct: 593 AKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT-SEQLDDIL 651
Query: 229 RAR---LFSRVEPAHKSKIVEFLQGMNEISAM 257
           +     +F+R  P  K  IVE  Q    I A+
Sbjct: 652 KYHTEIVFARTSPQQKLIIVEGCQRQGAIVAV 683

>pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 76  VKGAPEGVLERCTHARIGSQKVSLKDFSANTRFEN--LRSLEPKSKVSAIVPWGMKPEDM 133
           +KGAPE +L+RC+   +   +  LK+      F+N  L       +V     + +  +  
Sbjct: 512 MKGAPERILDRCSTILLNGAEEPLKE-DMKEAFQNAYLELGGLGERVLGFCHFALPEDKY 570
Query: 134 NL-----ADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKAT 188
           N      AD   F +   +L FVG++ M+DPPR  V D++ +CR+AGI+VI++TGD+  T
Sbjct: 571 NEGYPFDADEPNFPT--TDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 628
Query: 189 AEAICRRIGVFTEEEDT 205
           A+AI + +G+ +E  +T
Sbjct: 629 AKAIAKGVGIISEGNET 645

>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 32/188 (17%)
Query: 77  KGAPEGVLERCTHARIGSQKV-SLKDFSANTRFENL---RSLEP-KSKVSAIVPWGMKPE 131
           KGAPE +LE    +   S+KV S+ D  A     +L   R + P K+K S   PW     
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPW----- 477
Query: 132 DMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEA 191
                             FVG++ + DPPR +  ++I R    G+ V +ITGD  A  + 
Sbjct: 478 -----------------EFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE 520
Query: 192 ICRRIGVFTEEEDTTG--KSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQ 249
             RR+G+ T    ++    ++       +P+ E    + +A  F+ V P HK +IV+ LQ
Sbjct: 521 TGRRLGMGTNMYPSSALLGTHKDANLASIPVEE---LIEKADGFAGVFPEHKYEIVKKLQ 577
Query: 250 GMNEISAM 257
               I  M
Sbjct: 578 ERKHIVGM 585

>pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 142 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 201
            S+E+    +G++  +DPPR + + ++   +  G+ + ++TGD    A    R++G+ T 
Sbjct: 522 GSWEI----LGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTN 577
Query: 202 EEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
             +   +        D+P SE    V  A  F+ V P HK  +VE LQ    + AM
Sbjct: 578 IYNA--ERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAM 631

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	270
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	4e-87
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	1e-55
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	8e-49
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	2e-42
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	7e-42
3gwi_A	170	Magnesium-transporting ATPase, P-type 1; P-type AT	7e-16
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	3e-11
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	2e-10
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	3e-10
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	1e-09
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	2e-09
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	4e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
3fvv_A	232	Uncharacterized protein; unknown function, structu	4e-04

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995

 Score =  277 bits (712), Expect = 4e-87
 Identities = 136/259 (52%), Positives = 168/259 (64%), Gaps = 19/259 (7%)

Query: 14  NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK 73
           N  N  V    + E+A A    +    KKEFTLEFSRDRKSMS YC+P   S   + G K
Sbjct: 454 NVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSP-AKSSRAAVGNK 512

Query: 74  LFVKGAPEGVLERCTHARIGSQKVSLKD------FSANTRF----ENLRSLEPKSKVSAI 123
           +FVKGAPEGV++RC + R+G+ +V +         S    +    + LR L       A 
Sbjct: 513 MFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL-----ALAT 567

Query: 124 VPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITG 183
                K E+M L DS++F  YE +LTFVGVVGMLDPPRKEV  SI  CR AGIRVI+ITG
Sbjct: 568 RDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITG 627

Query: 184 DNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSK 243
           DNK TA AICRRIG+F E E+   ++Y+GREFDDLPL+EQ+ A  RA  F+RVEP+HKSK
Sbjct: 628 DNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSK 687

Query: 244 IVEFLQGMNEISAMDSSTG 262
           IVE+LQ  +EI+AM   TG
Sbjct: 688 IVEYLQSYDEITAM---TG 703

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034

 Score =  191 bits (487), Expect = 1e-55
 Identities = 70/270 (25%), Positives = 104/270 (38%), Gaps = 48/270 (17%)

Query: 27  EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 86
           E  +        ++ K   + F+   K   S                L +KGAPE VLER
Sbjct: 471 ELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIH---TLEDPRDPRHVLVMKGAPERVLER 527

Query: 87  CTHARIGSQKVSLKD------FSANTRF--ENLRSLEPKSKVSAI----VPWGMKPEDMN 134
           C+   I  Q++ L +       +A         R L             +     P    
Sbjct: 528 CSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVL-------GFCQLYLSEKDYPPGYA 580

Query: 135 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR 194
             D          L+F G+V M+DPPR  V D++ +CR AGIRVI++TGD+  TA+AI  
Sbjct: 581 F-DVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAA 639

Query: 195 RIGVFTEEEDTTGKSY--------------------SGREFDDLPLSEQKAAVARAR--L 232
            +G+ +E  +T                         +G +  D+  SE   A+      +
Sbjct: 640 SVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMV 699

Query: 233 FSRVEPAHKSKIVEFLQGMNEISAMDSSTG 262
           F+R  P  K  IVE  Q +  I A+   TG
Sbjct: 700 FARTSPQQKLVIVESCQRLGAIVAV---TG 726

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028

 Score =  172 bits (437), Expect = 8e-49
 Identities = 68/270 (25%), Positives = 107/270 (39%), Gaps = 48/270 (17%)

Query: 27  EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 86
           E      Q +  +  K   + F+   K   S     ++ K   S   L +KGAPE +L+R
Sbjct: 466 ELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIH---ENEKSSESRYLLVMKGAPERILDR 522

Query: 87  CTHARIGSQKVSLKDF------SANTRF--ENLRSLEPKSKVSAI----VPWGMKPEDMN 134
           C+   +   +  LK+       +A         R L             +P     E   
Sbjct: 523 CSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVL-------GFCHFALPEDKYNEGYP 575

Query: 135 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR 194
             D+ +      +L FVG++ M+DPPR  V D++ +CR+AGI+VI++TGD+  TA+AI +
Sbjct: 576 F-DADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAK 634

Query: 195 RIGVFTEEEDTTGKSY--------------------SGREFDDLPLSEQKAAVARARL-- 232
            +G+ +E  +T                          G +  DL        +       
Sbjct: 635 GVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIV 694

Query: 233 FSRVEPAHKSKIVEFLQGMNEISAMDSSTG 262
           F+R  P  K  IVE  Q    I A+   TG
Sbjct: 695 FARTSPQQKLIIVEGCQRQGAIVAV---TG 721

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920

 Score =  153 bits (389), Expect = 2e-42
 Identities = 51/231 (22%), Positives = 85/231 (36%), Gaps = 36/231 (15%)

Query: 34  QDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIG 93
           + V +K+K      F    K + +        +         VKGAP  VL+        
Sbjct: 437 KSVLSKYKVLQFHPFDPVSKKVVAVV------ESPQGERITCVKGAPLFVLKTVEEDHPI 490

Query: 94  SQKVSLKDFSANTRF--ENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFV 151
            ++V     +    F     RSL        +     K               E +   +
Sbjct: 491 PEEVDQAYKNKVAEFATRGFRSL-------GV---ARKRG-------------EGSWEIL 527

Query: 152 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYS 211
           G++  +DPPR + + ++   +  G+ + ++TGD    A    R++G+ T   +   +   
Sbjct: 528 GIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYN--AERLG 585

Query: 212 GREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTG 262
                D+P SE    V  A  F+ V P HK  +VE LQ    + AM   TG
Sbjct: 586 LGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAM---TG 633

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885

 Score =  152 bits (385), Expect = 7e-42
 Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 31/237 (13%)

Query: 28  QAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERC 87
             +A  ++     ++   L F+   K  +           GS       KGAPE +LE  
Sbjct: 380 GMLADPKEARAGIREVHFLPFNPVDKRTALTY------IDGSGNWHRVSKGAPEQILELA 433

Query: 88  THARIGSQKVSLKDFSANTRF--ENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYE 145
             +   S+KV     S   ++    LRSL       A+     +       +S       
Sbjct: 434 KASNDLSKKVL----SIIDKYAERGLRSL-------AV---ARQVVPEKTKESP-----G 474

Query: 146 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDT 205
               FVG++ + DPPR +  ++I R    G+ V +ITGD  A  +   RR+G+ T     
Sbjct: 475 APWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP- 533

Query: 206 TGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTG 262
           +       +  +L     +  + +A  F+ V P HK +IV+ LQ    I  M   TG
Sbjct: 534 SSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGM---TG 587

>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170

 Score = 72.2 bits (178), Expect = 7e-16
 Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 26/136 (19%)

Query: 34  QDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIG 93
           + + ++W+K   + F  +R+ MS            +   +L  KGA + +L  C+  R  
Sbjct: 50  RSLASRWQKIDEIPFDFERRRMSVVV------AENTEHHQLVCKGALQEILNVCSQVRHN 103

Query: 94  SQKVSLKD------FSANTRF--ENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYE 145
            + V L D               + LR +       A      +  D   AD       E
Sbjct: 104 GEIVPLDDIMLRKIKRVTDTLNRQGLRVV-----AVATKYLPAREGDYQRAD-------E 151

Query: 146 VNLTFVGVVGMLDPPR 161
            +L   G +  LD   
Sbjct: 152 SDLILEGYIAFLDHHH 167

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263

 Score = 60.9 bits (149), Expect = 3e-11
 Identities = 16/112 (14%), Positives = 40/112 (35%), Gaps = 31/112 (27%)

Query: 146 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDT 205
           +N   +    + D PR  + D + + +  G+++I+++GD +   + + + + +       
Sbjct: 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI------- 175

Query: 206 TGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
                                      +S + P  K +I+E L+       M
Sbjct: 176 ------------------------QEYYSNLSPEDKVRIIEKLKQNGNKVLM 203

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 31/112 (27%)

Query: 146 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDT 205
           V+   V ++ + DP +    ++I   + +GI ++++TGD+K TAEA+   +G+       
Sbjct: 541 VDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI------- 593

Query: 206 TGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
                                    ++ + + P  KS+IV  L+    I AM
Sbjct: 594 ------------------------KKVVAEIMPEDKSRIVSELKDKGLIVAM 621

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280

 Score = 58.2 bits (142), Expect = 3e-10
 Identities = 15/49 (30%), Positives = 31/49 (63%)

Query: 150 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
             GV+ + D  R E  ++I++ +A GI+ +++TGDN+  A+ +   +G+
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL 183

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287

 Score = 56.7 bits (138), Expect = 1e-09
 Identities = 15/49 (30%), Positives = 28/49 (57%)

Query: 150 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
             G++ + D  ++    ++   +  GI+V +ITGDN  +AEAI R + +
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 202

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 16/53 (30%), Positives = 29/53 (54%)

Query: 146 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
            N    G++ + D  ++    ++   +  GI+V +ITGDN  +AEAI R + +
Sbjct: 444 RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 496

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 55.6 bits (135), Expect = 4e-09
 Identities = 15/49 (30%), Positives = 28/49 (57%)

Query: 150 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
             G++ + D  ++    ++   +  GI+V +ITGDN  +AEAI R + +
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 574

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 29/187 (15%), Positives = 51/187 (27%), Gaps = 56/187 (29%)

Query: 80  PEGVLERCT--HARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLAD 137
           PE VLE       +I     S  D S+N +   LR    ++++  ++        + +  
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIK---LRIHSIQAELRRLLKSKPYENCLLVLL 251

Query: 138 STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD---------NKAT 188
                   V           +      F+    C+     +++ T              T
Sbjct: 252 -------NVQ----------NAKAWNAFN--LSCK-----ILLTTRFKQVTDFLSAATTT 287

Query: 189 AEAICRRIGVFTEEEDTTGKS----YSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKI 244
             ++       T +E    KS    Y      DLP                  P   S I
Sbjct: 288 HISLDHHSMTLTPDE---VKSLLLKYLDCRPQDLPREVLT-----------TNPRRLSII 333

Query: 245 VEFLQGM 251
            E ++  
Sbjct: 334 AESIRDG 340

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} Length = 232

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 5/74 (6%)

Query: 161 RKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV----FTEEEDTTGKSYSGREFD 216
             +  D +    AAG    ++T  N      I R  GV     T+ E   G+ Y+GR   
Sbjct: 94  TVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGR-YTGRIEG 152

Query: 217 DLPLSEQKAAVARA 230
                E K      
Sbjct: 153 TPSFREGKVVRVNQ 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	270
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	100.0
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	100.0
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	100.0
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	100.0
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	100.0
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	99.88
3gwi_A	170	Magnesium-transporting ATPase, P-type 1; P-type AT	99.87
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	99.85
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	99.84
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	99.44
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.04
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.23
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.19
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.43
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.43
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	98.38
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.33
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.32
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.23
4gxt_A	385	A conserved functionally unknown protein; structur	98.22
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.21
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.17
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.1
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.07
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	98.04
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.03
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.02
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	97.99
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	97.99
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	97.93
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.92
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	97.92
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	97.88
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	97.84
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	97.84
2hsz_A	243	Novel predicted phosphatase; structural genomics,	97.76
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	97.74
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	97.71
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.71
1te2_A	226	Putative phosphatase; structural genomics, phospha	97.69
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	97.67
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	97.65
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	97.65
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	97.65
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	97.62
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	97.61
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	97.53
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	97.5
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	97.49
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	97.45
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	97.43
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	97.42
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	97.42
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	97.4
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	97.38
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	97.38
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	97.34
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	97.3
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	97.29
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	97.28
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	97.25
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	97.24
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	97.24
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	97.24
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	97.2
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	97.17
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	97.16
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	97.16
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	97.15
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	97.13
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	97.11
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	97.08
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	97.01
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	96.97
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	96.96
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	96.94
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	96.93
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	96.91
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	96.91
2o2x_A	218	Hypothetical protein; structural genomics, joint c	96.87
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	96.86
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	96.84
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	96.82
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	96.78
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	96.76
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	96.74
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	96.65
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	96.64
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	96.56
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	96.54
1svj_A	156	Potassium-transporting ATPase B chain; alpha-beta	96.5
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	96.45
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	96.41
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	96.39
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	96.33
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	96.26
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	96.24
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	96.19
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	96.05
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	96.01
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	95.97
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	95.95
2zg6_A	220	Putative uncharacterized protein ST2620, probable	95.94
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	95.88
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	95.84
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	95.79
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	95.78
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	95.73
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	95.57
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	95.23
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	94.47
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	94.39
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	93.98
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	93.92
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	93.04
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	92.88
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	92.86
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	92.24
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	91.76
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	91.06
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	89.85
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	88.93
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	88.63
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	88.58
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	88.11
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	87.97
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	86.64
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	86.25
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	86.24
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	85.42
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	85.19
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	85.11
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	84.7
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	82.67
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	82.01
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	81.58
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	81.58
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	81.51
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	81.49
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	80.95
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	80.94

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=100.00  E-value=4.7e-42  Score=350.27  Aligned_cols=228  Identities=57%  Similarity=0.882  Sum_probs=192.7

Q ss_pred             hhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHH--------HHHh-
Q psy885           36 VETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDF--------SANT-  106 (270)
Q Consensus        36 ~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~--------~~~~-  106 (270)
                      .+..|++++++||+|+||||||+++...++...+ +.++|+|||||.|+++|+.+..++...++++.        ..++ 
T Consensus       476 ~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~-~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~  554 (995)
T 3ar4_A          476 IRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAV-GNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWG  554 (995)
T ss_dssp             HHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSC-CCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHH
T ss_pred             hhhhCceEEEeecCCCCCeeEEEEecCCCCcccc-ceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHH
Confidence            5678999999999999999999998654311001 47899999999999999987777777777643        3355 


Q ss_pred             -hhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCC
Q psy885          107 -RFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN  185 (270)
Q Consensus       107 -~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~  185 (270)
                       +++|+|||++     ||++++..+......+...++.+|.+++|+|+++++||+|++++++|+.|+++||+++|+|||+
T Consensus       555 ~a~~GlRvLa~-----A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~  629 (995)
T 3ar4_A          555 TGRDTLRCLAL-----ATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDN  629 (995)
T ss_dssp             HSTTCCEEEEE-----EEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hhhccceEEEE-----EEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCC
Confidence             7899999999     8877754332222222234566789999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhh
Q psy885          186 KATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTE  265 (270)
Q Consensus       186 ~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~  265 (270)
                      ..||.++|+++||..........+++|.++..+.++++.+.+.+..+|||++|+||.++|+.||++|+.|+|+|||+||+
T Consensus       630 ~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~  709 (995)
T 3ar4_A          630 KGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDA  709 (995)
T ss_dssp             HHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGH
T ss_pred             HHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhH
Confidence            99999999999998654433456899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhc
Q psy885          266 LRIF  269 (270)
Q Consensus       266 ~ai~  269 (270)
                      +||.
T Consensus       710 ~alk  713 (995)
T 3ar4_A          710 PALK  713 (995)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9973

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=100.00  E-value=2.5e-40  Score=338.21  Aligned_cols=226  Identities=27%  Similarity=0.366  Sum_probs=186.0

Q ss_pred             hhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHH--------HHHh
Q psy885           35 DVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDF--------SANT  106 (270)
Q Consensus        35 ~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~--------~~~~  106 (270)
                      .++..|++++++||+|.||||+++++.....  ++ ++++|+|||||.|+++|+....++...++++.        ..++
T Consensus       474 ~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~--~~-~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~  550 (1028)
T 2zxe_A          474 GMRDRNPKIVEIPFNSTNKYQLSIHENEKSS--ES-RYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLEL  550 (1028)
T ss_dssp             HHHHHSCEEEEECCCTTTCEEEEEEECSCTT--TC-CEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCceEEEeccCcccceEEEEEeccCCC--CC-cEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHH
Confidence            4577899999999999999999999864210  01 68999999999999999987777777777654        3345


Q ss_pred             hhccceEEEeecccccceeCCCCccc--ccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCC
Q psy885          107 RFENLRSLEPKSKVSAIVPWGMKPED--MNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD  184 (270)
Q Consensus       107 ~~~GlRvl~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD  184 (270)
                      +++|+|||++     ||++++.....  ..+. ......+|.+++|+|+++++||+|++++++|+.|+++||+++|+|||
T Consensus       551 a~~G~RvL~~-----A~~~l~~~~~~~~~~~~-~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD  624 (1028)
T 2zxe_A          551 GGLGERVLGF-----CHFALPEDKYNEGYPFD-ADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGD  624 (1028)
T ss_dssp             HHTTCEEEEE-----EEEECCSTTSCTTCCCC-TTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred             HhcCCEEEEE-----EEEecCccccccccccc-hhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCC
Confidence            8999999999     77776542111  0010 01112347899999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHhCCCCCCCCc--------------------cceeeechhhcCCCHHHHHHhccCc--eEEEecChhhHH
Q psy885          185 NKATAEAICRRIGVFTEEEDT--------------------TGKSYSGREFDDLPLSEQKAAVARA--RLFSRVEPAHKS  242 (270)
Q Consensus       185 ~~~ta~~iA~~~gi~~~~~~~--------------------~~~~i~G~~~~~l~~~~~~~~~~~~--~v~ar~tP~~K~  242 (270)
                      +..||.++|++|||...+...                    ...+++|.++..+.++++++.+.++  .+|||++|+||.
T Consensus       625 ~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~  704 (1028)
T 2zxe_A          625 HPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKL  704 (1028)
T ss_dssp             CHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHH
T ss_pred             CHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHH
Confidence            999999999999998543211                    1468999999999999998887766  499999999999


Q ss_pred             HHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          243 KIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       243 ~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      .+|+.+|+.|++|+|+|||+||++||.
T Consensus       705 ~iV~~lq~~g~~V~~iGDG~ND~paLk  731 (1028)
T 2zxe_A          705 IIVEGCQRQGAIVAVTGDGVNDSPALK  731 (1028)
T ss_dssp             HHHHHHHHTTCCEEEEECSGGGHHHHH
T ss_pred             HHHHHHHhCCCEEEEEcCCcchHHHHH
Confidence            999999999999999999999999983

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=100.00  E-value=4e-39  Score=329.57  Aligned_cols=229  Identities=29%  Similarity=0.385  Sum_probs=187.6

Q ss_pred             hhhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHH--------
Q psy885           33 RQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSA--------  104 (270)
Q Consensus        33 ~~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~--------  104 (270)
                      ....++.|++++++||+|.||||++++.......  + ++++|+|||||.|+++|+.+..++...++++..+        
T Consensus       477 ~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~--~-~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~  553 (1034)
T 3ixz_A          477 AMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRD--P-RHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYL  553 (1034)
T ss_pred             hHHHHHhCcceEEeeecCCCceEEEEEEecCCCC--c-cEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHH
Confidence            4566889999999999999999988876543210  1 6899999999999999998877788888876543        


Q ss_pred             HhhhccceEEEeecccccceeCCCCccccccc-ccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcC
Q psy885          105 NTRFENLRSLEPKSKVSAIVPWGMKPEDMNLA-DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITG  183 (270)
Q Consensus       105 ~~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTG  183 (270)
                      .++.+|+|||++     ||+.++......... +....+.+|++|+|+|+++++||+|++++++|+.|+++||+++|+||
T Consensus       554 ~~a~~G~RvLa~-----A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTG  628 (1034)
T 3ixz_A          554 SLGGLGERVLGF-----CQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTG  628 (1034)
T ss_pred             HHHhcCcHhheE-----eEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeC
Confidence            348899999999     777665332111100 11112345889999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHhCCCCCCCC--------------------ccceeeechhhcCCCHHHHHHhccCc--eEEEecChhhH
Q psy885          184 DNKATAEAICRRIGVFTEEED--------------------TTGKSYSGREFDDLPLSEQKAAVARA--RLFSRVEPAHK  241 (270)
Q Consensus       184 D~~~ta~~iA~~~gi~~~~~~--------------------~~~~~i~G~~~~~l~~~~~~~~~~~~--~v~ar~tP~~K  241 (270)
                      |+..||.++|+++||..++..                    ....+++|.++..+..+++.+.+...  .+|+|++|+||
T Consensus       629 d~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K  708 (1034)
T 3ixz_A          629 DHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQK  708 (1034)
T ss_pred             CCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHH
Confidence            999999999999999754321                    12358999999999999888887654  59999999999


Q ss_pred             HHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          242 SKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       242 ~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      .++|+.+|+.|++|+|+|||.||++||.
T Consensus       709 ~~iv~~lq~~g~~V~a~GDG~ND~~mLk  736 (1034)
T 3ixz_A          709 LVIVESCQRLGAIVAVTGDGVNDSPALK  736 (1034)
T ss_pred             HHHHHHHHHcCCEEEEECCcHHhHHHHH
Confidence            9999999999999999999999999984

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=100.00  E-value=2e-39  Score=326.32  Aligned_cols=215  Identities=24%  Similarity=0.280  Sum_probs=173.9

Q ss_pred             ChhHHHhhhh-------hhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhcccccc-CC-
Q psy885           24 GRREQAIAVR-------QDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI-GS-   94 (270)
Q Consensus        24 ~~~e~~~~~~-------~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~-~~-   94 (270)
                      +|.|.+....       +.....|++++.+||+|.+|+|+++++..++      +.++|+|||||.|+++|+.... +. 
T Consensus       420 ~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g------~~~~~~KGape~il~~c~~~~~~~~~  493 (920)
T 1mhs_A          420 DAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQG------ERITCVKGAPLFVLKTVEEDHPIPEE  493 (920)
T ss_dssp             CSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSS------SCEEEEEECHHHHHHHCCCSSCCCHH
T ss_pred             ChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeCCC------cEEEEEeCCHHHHHHhccccCCCCHH
Confidence            5666555431       1235678999999999999999999976432      6789999999999999974210 00 


Q ss_pred             eeeeccHHHHHhhhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhC
Q psy885           95 QKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAA  174 (270)
Q Consensus        95 ~~~~l~~~~~~~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~a  174 (270)
                      ....+.+...+++.+|+|||++     ||+..                  |.+++|+|++++.||+|++++++|+.|+++
T Consensus       494 ~~~~~~~~~~~~a~~G~RvL~v-----A~~~~------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~a  550 (920)
T 1mhs_A          494 VDQAYKNKVAEFATRGFRSLGV-----ARKRG------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTL  550 (920)
T ss_dssp             HHHHHHHHHHHHHTSSCCCCEE-----CCCSS------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEE-----EEecc------------------ccccEEEEEEEEeccccccHHHHHHHHhhc
Confidence            0111223345668999999999     87631                  467899999999999999999999999999


Q ss_pred             CCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCE
Q psy885          175 GIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEI  254 (270)
Q Consensus       175 gi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~  254 (270)
                      ||+++|+|||++.||.+||+++||..........+++|.  ..++++++.+.+.++.||||++|+||.++|+.||++|++
T Consensus       551 GI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~  628 (920)
T 1mhs_A          551 GLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYL  628 (920)
T ss_dssp             TCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCC
T ss_pred             CceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCe
Confidence            999999999999999999999999742211123467776  567788888889999999999999999999999999999


Q ss_pred             EEEECCcHhhhhhhc
Q psy885          255 SAMDSSTGKTELRIF  269 (270)
Q Consensus       255 V~miGDG~ND~~ai~  269 (270)
                      |+|+|||+||++||.
T Consensus       629 Vam~GDGvNDapaLk  643 (920)
T 1mhs_A          629 VAMTGDGVNDAPSLK  643 (920)
T ss_dssp             CEECCCCGGGHHHHH
T ss_pred             EEEEcCCcccHHHHH
Confidence            999999999999983

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=100.00  E-value=1.7e-39  Score=326.43  Aligned_cols=209  Identities=25%  Similarity=0.262  Sum_probs=175.1

Q ss_pred             hhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEE
Q psy885           36 VETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLE  115 (270)
Q Consensus        36 ~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~  115 (270)
                      .+..|+.++.+||+|.+|||+++++..++      +.++|+|||||.|+++|+..  ......+.+...+++.+|+||++
T Consensus       388 ~~~~~~~~~~~pF~s~~k~~sv~~~~~~g------~~~~~~KGa~e~il~~c~~~--~~~~~~~~~~~~~~a~~G~rvl~  459 (885)
T 3b8c_A          388 ARAGIREVHFLPFNPVDKRTALTYIDGSG------NWHRVSKGAPEQILELAKAS--NDLSKKVLSIIDKYAERGLRSLA  459 (885)
T ss_dssp             CCCSSCCBCCCCCCTTTCCCCCBBCSSSS------CBCBCCCCSGGGTSSSSCCC--STTTTTHHHHHHHHTTTTCEEEE
T ss_pred             HhhcCceeecccCCcccceEEEEEEecCC------cEEEEEeCCHHHHHHhccCc--hhhHHHHHHHHHHHHhCCCeEEE
Confidence            34578899999999999999998875322      67889999999999999741  11122344556677999999999


Q ss_pred             eecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q psy885          116 PKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR  195 (270)
Q Consensus       116 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~  195 (270)
                      +     ||++++...          .+..|++++|+|++++.||+|++++++|+.|+++||+++|+|||+..||.+||++
T Consensus       460 v-----A~~~~~~~~----------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~  524 (885)
T 3b8c_A          460 V-----ARQVVPEKT----------KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR  524 (885)
T ss_dssp             E-----CCBCCCSSS----------SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHT
T ss_pred             E-----EEecccccc----------ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHH
Confidence            9     888765421          1234788999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCCccceeeechhhcC-CCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          196 IGVFTEEEDTTGKSYSGREFDD-LPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       196 ~gi~~~~~~~~~~~i~G~~~~~-l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      +||..+.  ....+++|.+++. +++.++++.+.++.||+|++|+||.++|+.||++|++|+|+|||+||++||.
T Consensus       525 lGi~~~~--~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk  597 (885)
T 3b8c_A          525 LGMGTNM--YPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALK  597 (885)
T ss_dssp             TTCTTCC--STTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHH
T ss_pred             hCCcccc--CCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHH
Confidence            9996421  1234678888876 7777788888899999999999999999999999999999999999999973

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=99.88  E-value=1.6e-22  Score=199.83  Aligned_cols=156  Identities=19%  Similarity=0.194  Sum_probs=128.4

Q ss_pred             cceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeec
Q psy885           39 KWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKS  118 (270)
Q Consensus        39 ~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~  118 (270)
                      .+......+|++...+...- ..++       .  .+.+|+++.+.+.+..      ..++.+...+++.+|+|++.+  
T Consensus       478 ~~~~~~~~~f~~~~g~gv~~-~~~g-------~--~~~~G~~~~~~~~~~~------~~~~~~~~~~~~~~G~~vl~v--  539 (736)
T 3rfu_A          478 GLSLGSVEAFEAPTGKGVVG-QVDG-------H--HVAIGNARLMQEHGGD------NAPLFEKADELRGKGASVMFM--  539 (736)
T ss_dssp             CCCCCCCSCCCCCTTTEEEE-CSSS-------S--CEEEESHHHHHHHCCC------CHHHHHHHHHHHHTTCEEEEE--
T ss_pred             CCCccCcccccccCCceEEE-EECC-------E--EEEEcCHHHHHHcCCC------hhHHHHHHHHHHhcCCeEEEE--
Confidence            34445566788887765332 2222       2  2467999988765432      123445566778999999999  


Q ss_pred             ccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q psy885          119 KVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV  198 (270)
Q Consensus       119 ~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi  198 (270)
                         |+                       +..++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+|+++||
T Consensus       540 ---a~-----------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi  593 (736)
T 3rfu_A          540 ---AV-----------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI  593 (736)
T ss_dssp             ---EE-----------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred             ---EE-----------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence               64                       3478999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          199 FTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       199 ~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      .                               .++++++|++|.++|+.||+.|+.|+|+|||+||++||.
T Consensus       594 ~-------------------------------~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~  633 (736)
T 3rfu_A          594 K-------------------------------KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA  633 (736)
T ss_dssp             C-------------------------------CEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHH
T ss_pred             C-------------------------------EEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHH
Confidence            7                               799999999999999999999999999999999999973

>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}

Probab=99.87  E-value=1.7e-22  Score=166.23  Aligned_cols=108  Identities=23%  Similarity=0.364  Sum_probs=88.3

Q ss_pred             hhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHH--------H
Q psy885           34 QDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSA--------N  105 (270)
Q Consensus        34 ~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~--------~  105 (270)
                      ..++..|+++.++||||.||||+|+++..++      ++++|+|||||+|+++|+.+..++...|+++..+        .
T Consensus        50 ~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g------~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~  123 (170)
T 3gwi_A           50 RSLASRWQKIDEIPFDFERRRMSVVVAENTE------HHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDT  123 (170)
T ss_dssp             HHHHHHSEEEEEECCCTTTCEEEEEEESSSS------EEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHH
T ss_pred             hhhhhcCeEEeeEecCcccCcEEEEEEeCCC------CEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999986532      6889999999999999999888888889986543        3


Q ss_pred             hhhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCC
Q psy885          106 TRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDP  159 (270)
Q Consensus       106 ~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~  159 (270)
                      ++.+|+||||+     ||++++..+....       ...|++|+|+|+++|.|.
T Consensus       124 la~~GlRvLav-----A~k~~~~~~~~~~-------~~~E~~L~f~G~~g~~~~  165 (170)
T 3gwi_A          124 LNRQGLRVVAV-----ATKYLPAREGDYQ-------RADESDLILEGYIAFLDH  165 (170)
T ss_dssp             HHHTTCEEEEE-----EEEEEECCSSCCC-------GGGSCSEEEEEEEEEEC-
T ss_pred             HHhCCCEEEEE-----EEEECCCCccccC-------ccccCCcEEEehhccccc
Confidence            49999999999     8888765432211       134899999999999885

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=99.85  E-value=4.4e-21  Score=189.81  Aligned_cols=130  Identities=22%  Similarity=0.197  Sum_probs=112.5

Q ss_pred             EEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEE
Q psy885           75 FVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVV  154 (270)
Q Consensus        75 ~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i  154 (270)
                      +.+|+++.+.+....     ....+......++.+|+|++.+     ++                       ++.++|++
T Consensus       484 ~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~v-----a~-----------------------~~~~~G~i  530 (723)
T 3j09_A          484 ILVGNKRLMEDFGVA-----VSNEVELALEKLEREAKTAVIV-----AR-----------------------NGRVEGII  530 (723)
T ss_dssp             EEEECHHHHHHTTCC-----CCHHHHHHHHHHHTTTCEEEEE-----EE-----------------------TTEEEEEE
T ss_pred             EEECCHHHHHhcCCC-----ccHHHHHHHHHHHhcCCeEEEE-----EE-----------------------CCEEEEEE
Confidence            568998877654321     1122344556678999999999     53                       46899999


Q ss_pred             eecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          155 GMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       155 ~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      +++|++|++++++|+.|+++||+++|+|||+..+|..+|+++||.                               .+|+
T Consensus       531 ~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-------------------------------~~~~  579 (723)
T 3j09_A          531 AVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-------------------------------LVIA  579 (723)
T ss_dssp             EEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------EEEC
T ss_pred             eecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc-------------------------------EEEc
Confidence            999999999999999999999999999999999999999999997                               8999


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      +++|++|..+|+.||+. +.|+|+|||+||++||.
T Consensus       580 ~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~  613 (723)
T 3j09_A          580 EVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA  613 (723)
T ss_dssp             SCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHH
T ss_pred             cCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHh
Confidence            99999999999999988 89999999999999973

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=99.84  E-value=9.2e-21  Score=185.31  Aligned_cols=130  Identities=22%  Similarity=0.197  Sum_probs=112.1

Q ss_pred             EEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEE
Q psy885           75 FVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVV  154 (270)
Q Consensus        75 ~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i  154 (270)
                      +.+|+++.+.+....     ....+.....+++.+|+|++.+     ++                       ++.++|++
T Consensus       406 v~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~l~v-----a~-----------------------~~~~~G~i  452 (645)
T 3j08_A          406 ILVGNKRLMEDFGVA-----VSNEVELALEKLEREAKTAVIV-----AR-----------------------NGRVEGII  452 (645)
T ss_dssp             EEEECHHHHHHTTCC-----CCHHHHHHHHHHHTTTCCCEEE-----EE-----------------------TTEEEEEE
T ss_pred             EEECCHHHHHhcCCC-----ccHHHHHHHHHHHhcCCeEEEE-----EE-----------------------CCEEEEEE
Confidence            568998877653321     1122344456668899999999     53                       46799999


Q ss_pred             eecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          155 GMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       155 ~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      +++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+.                               .+|+
T Consensus       453 ~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-------------------------------~~~~  501 (645)
T 3j08_A          453 AVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-------------------------------LVIA  501 (645)
T ss_dssp             EEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------EEEC
T ss_pred             EecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-------------------------------EEEE
Confidence            999999999999999999999999999999999999999999997                               8999


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      +++|++|..+|+.+|+. +.|+|+|||.||++||.
T Consensus       502 ~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~  535 (645)
T 3j08_A          502 EVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA  535 (645)
T ss_dssp             SCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHH
T ss_pred             eCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHH
Confidence            99999999999999998 89999999999999973

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=99.44  E-value=5.9e-14  Score=124.31  Aligned_cols=107  Identities=10%  Similarity=0.002  Sum_probs=81.6

Q ss_pred             ecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhc--cCceEE
Q psy885          156 MLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAV--ARARLF  233 (270)
Q Consensus       156 ~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~--~~~~v~  233 (270)
                      ..+++||+++++++.|+++|++++|+|||+..++.++|+++|+...+....+..+..      .++.+...+  +...++
T Consensus       138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~------~~~~~~~~~~~~~i~~~  211 (297)
T 4fe3_A          138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF------DENGVLKGFKGELIHVF  211 (297)
T ss_dssp             SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE------CTTSBEEEECSSCCCTT
T ss_pred             cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE------cccceeEeccccccchh
Confidence            357999999999999999999999999999999999999999875432111111111      001000001  123567


Q ss_pred             EecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          234 SRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       234 ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      ++..|.+|...+..+++.++.|+|+|||+||++|+
T Consensus       212 ~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~  246 (297)
T 4fe3_A          212 NKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMA  246 (297)
T ss_dssp             CHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTT
T ss_pred             hcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHH
Confidence            88899999999999999999999999999999984

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.04  E-value=7.1e-14  Score=121.98  Aligned_cols=93  Identities=17%  Similarity=0.366  Sum_probs=86.0

Q ss_pred             cCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHH
Q psy885          145 EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQK  224 (270)
Q Consensus       145 e~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~  224 (270)
                      ..+-.+.|.+.+.|+++|++.++|+.|++.|++++|+|||+..++..+++++||.                         
T Consensus       122 ~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------  176 (263)
T 2yj3_A          122 YINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ-------------------------  176 (263)
Confidence            3456789999999999999999999999999999999999999999999999986                         


Q ss_pred             HhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          225 AAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       225 ~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                            .+|+.+.|+.|..+++.++..+..|+|||||.||+.|+
T Consensus       177 ------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa  214 (263)
T 2yj3_A          177 ------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAAL  214 (263)
Confidence                  67788889999999999998888999999999998875

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.23  E-value=7.3e-11  Score=103.80  Aligned_cols=106  Identities=25%  Similarity=0.274  Sum_probs=93.8

Q ss_pred             HHHhhhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEc
Q psy885          103 SANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVIT  182 (270)
Q Consensus       103 ~~~~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlT  182 (270)
                      ...+..+|.+++.+     ++                       +..+++.+...++++|++.++|+.|++.|+++.++|
T Consensus       135 ~~~~~~~g~~~i~~-----~~-----------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T  186 (287)
T 3a1c_A          135 LEKLEREAKTAVIV-----AR-----------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT  186 (287)
T ss_dssp             HHHHHHTTCEEEEE-----EE-----------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHhCCCeEEEE-----EE-----------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEe
Confidence            44557789999988     53                       236788899999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCcH
Q psy885          183 GDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSSTG  262 (270)
Q Consensus       183 GD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~  262 (270)
                      |+....+..+++.+|+.                               ..|..+.|..|...++.|... ..|+|+||+.
T Consensus       187 ~~~~~~~~~~l~~~gl~-------------------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~  234 (287)
T 3a1c_A          187 GDNWRSAEAISRELNLD-------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGI  234 (287)
T ss_dssp             SSCHHHHHHHHHHHTCS-------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTT
T ss_pred             CCCHHHHHHHHHHhCCc-------------------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCH
Confidence            99999999999999986                               677778899999999999887 8899999999


Q ss_pred             hhhhhh
Q psy885          263 KTELRI  268 (270)
Q Consensus       263 ND~~ai  268 (270)
                      ||+.|.
T Consensus       235 ~Di~~a  240 (287)
T 3a1c_A          235 NDAPAL  240 (287)
T ss_dssp             TCHHHH
T ss_pred             HHHHHH
Confidence            998875

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.19  E-value=3.7e-10  Score=97.46  Aligned_cols=125  Identities=21%  Similarity=0.276  Sum_probs=102.3

Q ss_pred             EEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEE
Q psy885           75 FVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVV  154 (270)
Q Consensus        75 ~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i  154 (270)
                      +..|.++.+......         ...........+.+++.+     ++                       +..++|.+
T Consensus        97 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-----~~-----------------------~~~~~~~~  139 (280)
T 3skx_A           97 YMVVSPGYIRELGIK---------TDESVEKLKQQGKTVVFI-----LK-----------------------NGEVSGVI  139 (280)
T ss_dssp             EEEECHHHHHHTTCC---------CCTTHHHHHTTTCEEEEE-----EE-----------------------TTEEEEEE
T ss_pred             EEEecHHHHHHcCCC---------chHHHHHHHhCCCeEEEE-----EE-----------------------CCEEEEEE
Confidence            345777776654422         223344556677777776     32                       34678999


Q ss_pred             eecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          155 GMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       155 ~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      .+.++++|++.++++.|++.|+++.|+||+....+..+++.+|+.                               ..|.
T Consensus       140 ~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------------~~f~  188 (280)
T 3skx_A          140 ALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD-------------------------------DYFA  188 (280)
T ss_dssp             EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------EEEC
T ss_pred             EecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh-------------------------------hHhH
Confidence            999999999999999999999999999999999999999999986                               6788


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      .+.|.+|...++.+.+.. .++|+||+.||+.|+
T Consensus       189 ~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~  221 (280)
T 3skx_A          189 EVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPAL  221 (280)
T ss_dssp             SCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHH
T ss_pred             hcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHH
Confidence            899999999999998876 569999999999886

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.43  E-value=3e-07  Score=75.68  Aligned_cols=69  Identities=22%  Similarity=0.217  Sum_probs=58.2

Q ss_pred             HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHH
Q psy885          167 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE  246 (270)
Q Consensus       167 ~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~  246 (270)
                      +|+.|++.|+++.|+||+....+..+++.+|+.                               .+|...  ..|...++
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~-------------------------------~~f~~~--~~K~~~~~  100 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE-------------------------------HLFQGR--EDKLVVLD  100 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS-------------------------------EEECSC--SCHHHHHH
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH-------------------------------HHhcCc--CChHHHHH
Confidence            999999999999999999999999999999996                               344443  66777777


Q ss_pred             HHhhC----CCEEEEECCcHhhhhhh
Q psy885          247 FLQGM----NEISAMDSSTGKTELRI  268 (270)
Q Consensus       247 ~lq~~----g~~V~miGDG~ND~~ai  268 (270)
                      .+.+.    ...|+|+||+.||+.|+
T Consensus       101 ~~~~~~g~~~~~~~~vGD~~nDi~~~  126 (189)
T 3mn1_A          101 KLLAELQLGYEQVAYLGDDLPDLPVI  126 (189)
T ss_dssp             HHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHHHcCCChhHEEEECCCHHHHHHH
Confidence            76553    46799999999999876

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.43  E-value=2.9e-07  Score=77.49  Aligned_cols=70  Identities=19%  Similarity=0.097  Sum_probs=59.4

Q ss_pred             HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHH
Q psy885          167 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE  246 (270)
Q Consensus       167 ~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~  246 (270)
                      +|+.|++.|+++.|+||+....+..+++.+|+.                               .+|...  ..|..+++
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~-------------------------------~~f~~~--k~K~~~l~  130 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT-------------------------------HLYQGQ--SDKLVAYH  130 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC-------------------------------EEECSC--SSHHHHHH
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-------------------------------hhhccc--CChHHHHH
Confidence            899999999999999999999999999999996                               455544  56778887


Q ss_pred             HHhhC----CCEEEEECCcHhhhhhhc
Q psy885          247 FLQGM----NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       247 ~lq~~----g~~V~miGDG~ND~~ai~  269 (270)
                      .+.+.    ...|+|+||+.||+.|+.
T Consensus       131 ~~~~~lg~~~~~~~~vGDs~nDi~~~~  157 (211)
T 3ij5_A          131 ELLATLQCQPEQVAYIGDDLIDWPVMA  157 (211)
T ss_dssp             HHHHHHTCCGGGEEEEECSGGGHHHHT
T ss_pred             HHHHHcCcCcceEEEEcCCHHHHHHHH
Confidence            76553    567999999999998863

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=98.38  E-value=4.2e-07  Score=81.30  Aligned_cols=97  Identities=9%  Similarity=0.103  Sum_probs=63.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCc---cceeeechhhcCCCHHHHHHhccCceEEEe
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDT---TGKSYSGREFDDLPLSEQKAAVARARLFSR  235 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~---~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar  235 (270)
                      ++++++.++++.|++.|+++.|+||+....+..+++.+|+..--...   ....++|.-...             ..+++
T Consensus       178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~-------------~~~~k  244 (335)
T 3n28_A          178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGE-------------VVSAQ  244 (335)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESC-------------CCCHH
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeeccc-------------ccChh
Confidence            78999999999999999999999999999999999999985210000   000111110000             11112


Q ss_pred             cChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          236 VEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       236 ~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      -.|+-...+++.+.-....|+|+|||.||+.|+
T Consensus       245 pk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a  277 (335)
T 3n28_A          245 TKADILLTLAQQYDVEIHNTVAVGDGANDLVMM  277 (335)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             hhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHH
Confidence            233334444444443456799999999999886

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.33  E-value=4e-07  Score=75.69  Aligned_cols=71  Identities=14%  Similarity=0.090  Sum_probs=57.0

Q ss_pred             HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHH
Q psy885          166 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIV  245 (270)
Q Consensus       166 ~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV  245 (270)
                      ..|+.|++.|+++.|+||+....+..+++++|+.                               .+|...  ..|...+
T Consensus        59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~-------------------------------~~~~~~--k~k~~~~  105 (195)
T 3n07_A           59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGIS-------------------------------LIYQGQ--DDKVQAY  105 (195)
T ss_dssp             HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC-------------------------------EEECSC--SSHHHHH
T ss_pred             HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc-------------------------------EEeeCC--CCcHHHH
Confidence            4599999999999999999999999999999986                               344444  4566666


Q ss_pred             HHHhhC----CCEEEEECCcHhhhhhhc
Q psy885          246 EFLQGM----NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       246 ~~lq~~----g~~V~miGDG~ND~~ai~  269 (270)
                      +.+.+.    ...|+|+||+.||+.|+.
T Consensus       106 ~~~~~~~~~~~~~~~~vGD~~nDi~~~~  133 (195)
T 3n07_A          106 YDICQKLAIAPEQTGYIGDDLIDWPVME  133 (195)
T ss_dssp             HHHHHHHCCCGGGEEEEESSGGGHHHHT
T ss_pred             HHHHHHhCCCHHHEEEEcCCHHHHHHHH
Confidence            655432    357999999999998863

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.32  E-value=1.3e-06  Score=71.11  Aligned_cols=76  Identities=16%  Similarity=0.028  Sum_probs=60.1

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChh
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPA  239 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~  239 (270)
                      +.+...++|+.|++.|++++++||+....+..+++.+|+.                               ..|...  .
T Consensus        36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~-------------------------------~~~~~~--k   82 (180)
T 1k1e_A           36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK-------------------------------LFFLGK--L   82 (180)
T ss_dssp             EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC-------------------------------EEEESC--S
T ss_pred             eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc-------------------------------eeecCC--C
Confidence            3456779999999999999999999999999999999986                               333332  4


Q ss_pred             hHHHHHHHHhh-CC---CEEEEECCcHhhhhhh
Q psy885          240 HKSKIVEFLQG-MN---EISAMDSSTGKTELRI  268 (270)
Q Consensus       240 ~K~~iV~~lq~-~g---~~V~miGDG~ND~~ai  268 (270)
                      .|...++.+.+ .|   ..|+|+||+.||+.|+
T Consensus        83 ~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~  115 (180)
T 1k1e_A           83 EKETACFDLMKQAGVTAEQTAYIGDDSVDLPAF  115 (180)
T ss_dssp             CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence            56666665543 34   5799999999998875

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.23  E-value=1.1e-06  Score=72.63  Aligned_cols=71  Identities=17%  Similarity=0.140  Sum_probs=56.8

Q ss_pred             HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEec--ChhhHHHH
Q psy885          167 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRV--EPAHKSKI  244 (270)
Q Consensus       167 ~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~--tP~~K~~i  244 (270)
                      .|+.|++.|+++.++||+....+..+++.+|+.                               .+|...  .|+-...+
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~-------------------------------~~~~~~kpk~~~~~~~  102 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT-------------------------------HYYKGQVDKRSAYQHL  102 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC-------------------------------EEECSCSSCHHHHHHH
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc-------------------------------cceeCCCChHHHHHHH
Confidence            599999999999999999999999999999996                               344433  45555555


Q ss_pred             HHHHhhCCCEEEEECCcHhhhhhh
Q psy885          245 VEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       245 V~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      ++.+.-....|+|+||+.||+.|+
T Consensus       103 ~~~~~~~~~~~~~vGD~~~Di~~~  126 (191)
T 3n1u_A          103 KKTLGLNDDEFAYIGDDLPDLPLI  126 (191)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHhCCCHHHEEEECCCHHHHHHH
Confidence            555554456799999999998875

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.22  E-value=9e-07  Score=81.19  Aligned_cols=99  Identities=10%  Similarity=0.060  Sum_probs=67.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEe---
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSR---  235 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar---  235 (270)
                      .++|++.++|+.|++.|++|+||||.....+..+|.++|+.-.-.+  ..|+ |..+..-.         ...+..+   
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~--~~Vi-g~~l~~~~---------dG~~tg~~~~  288 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKE--EKVL-GLRLMKDD---------EGKILPKFDK  288 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCG--GGEE-EECEEECT---------TCCEEEEECT
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCc--ceEE-EeEEEEec---------CCceeeeecC
Confidence            4689999999999999999999999999999999999987321100  0111 22221100         0112222   


Q ss_pred             ----cChhhHHHHHHHHhhC--C-CEEEEECCcHhhhhhhc
Q psy885          236 ----VEPAHKSKIVEFLQGM--N-EISAMDSSTGKTELRIF  269 (270)
Q Consensus       236 ----~tP~~K~~iV~~lq~~--g-~~V~miGDG~ND~~ai~  269 (270)
                          +..+.|...|+.+-..  | ..|+++|||.||..||.
T Consensus       289 ~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~  329 (385)
T 4gxt_A          289 DFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLK  329 (385)
T ss_dssp             TSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHH
T ss_pred             ccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHh
Confidence                3456799999887432  2 34778899999999983

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.21  E-value=9.1e-06  Score=67.76  Aligned_cols=92  Identities=21%  Similarity=0.147  Sum_probs=64.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC---ccceeeechhhcCCCHHHHHHhccCceEE-E
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED---TTGKSYSGREFDDLPLSEQKAAVARARLF-S  234 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~---~~~~~i~G~~~~~l~~~~~~~~~~~~~v~-a  234 (270)
                      ++.|++.++++.|++.|+++.++||.....+..+++.+|+..--..   .....++|.                  +. .
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~------------------~~~~  153 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGR------------------IEGT  153 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEE------------------EESS
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeee------------------ecCC
Confidence            5799999999999999999999999999999999999998510000   000011111                  11 0


Q ss_pred             ecChhhHHHHHHHH-hhCC------CEEEEECCcHhhhhhh
Q psy885          235 RVEPAHKSKIVEFL-QGMN------EISAMDSSTGKTELRI  268 (270)
Q Consensus       235 r~tP~~K~~iV~~l-q~~g------~~V~miGDG~ND~~ai  268 (270)
                      ...+..|...++.+ ++.|      ..|.|+||+.||+.|+
T Consensus       154 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~  194 (232)
T 3fvv_A          154 PSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLL  194 (232)
T ss_dssp             CSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHH
T ss_pred             CCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHH
Confidence            12346777777654 4445      5799999999998875

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.17  E-value=2.9e-06  Score=68.90  Aligned_cols=68  Identities=12%  Similarity=0.160  Sum_probs=55.8

Q ss_pred             HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHH
Q psy885          167 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE  246 (270)
Q Consensus       167 ~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~  246 (270)
                      +|+.|++.|+++.++||+....+..+++.+|+.                                +|+..  ..|...++
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--------------------------------~~~~~--~~k~~~l~   92 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--------------------------------VLHGI--DRKDLALK   92 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--------------------------------EEESC--SCHHHHHH
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--------------------------------eEeCC--CChHHHHH
Confidence            899999999999999999999999999999983                                22222  56777777


Q ss_pred             HHhhC----CCEEEEECCcHhhhhhh
Q psy885          247 FLQGM----NEISAMDSSTGKTELRI  268 (270)
Q Consensus       247 ~lq~~----g~~V~miGDG~ND~~ai  268 (270)
                      .+.+.    ...|+|+||+.||+.|+
T Consensus        93 ~~~~~~~~~~~~~~~vGD~~nD~~~~  118 (176)
T 3mmz_A           93 QWCEEQGIAPERVLYVGNDVNDLPCF  118 (176)
T ss_dssp             HHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHHHcCCCHHHEEEEcCCHHHHHHH
Confidence            66543    35799999999999876

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.10  E-value=1.3e-06  Score=71.02  Aligned_cols=81  Identities=15%  Similarity=0.051  Sum_probs=60.2

Q ss_pred             CeEEEEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HhCCCCCCCCccceeeechhhcCCCHHHHH
Q psy885          147 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR--RIGVFTEEEDTTGKSYSGREFDDLPLSEQK  224 (270)
Q Consensus       147 ~l~~lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~--~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~  224 (270)
                      +-..++.+.+.|.      .+|+.|++.|+++.|+||+  ..+..+++  .+|+.                         
T Consensus        30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-------------------------   76 (168)
T 3ewi_A           30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-------------------------   76 (168)
T ss_dssp             SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred             CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence            3356777777776      3799999999999999999  67777888  45542                         


Q ss_pred             HhccCceEEEecChhhHHHHHHHHhhC-C---CEEEEECCcHhhhhhhc
Q psy885          225 AAVARARLFSRVEPAHKSKIVEFLQGM-N---EISAMDSSTGKTELRIF  269 (270)
Q Consensus       225 ~~~~~~~v~ar~tP~~K~~iV~~lq~~-g---~~V~miGDG~ND~~ai~  269 (270)
                             +|  ..+.+|...++.+.+. |   .-|+|+||+.||+.|+.
T Consensus        77 -------~~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~  116 (168)
T 3ewi_A           77 -------TE--VSVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLK  116 (168)
T ss_dssp             -------EE--CSCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHH
T ss_pred             -------EE--ECCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHH
Confidence                   12  1245788888876543 3   56999999999998863

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.07  E-value=6.9e-06  Score=73.22  Aligned_cols=91  Identities=12%  Similarity=0.104  Sum_probs=63.3

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEe---
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSR---  235 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar---  235 (270)
                      ++.|++.++++.|++.|+++.++||.....+..+++.+|+..--    ..++...+               ..+-.+   
T Consensus       179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f----~~~l~~~d---------------g~~tg~i~~  239 (317)
T 4eze_A          179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAF----SNTVEIRD---------------NVLTDNITL  239 (317)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEE----EECEEEET---------------TEEEEEECS
T ss_pred             EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEE----EEEEEeeC---------------CeeeeeEec
Confidence            58999999999999999999999999999999999999985210    00000000               000001   


Q ss_pred             --cChhhHHHHHHHHhh-C---CCEEEEECCcHhhhhhh
Q psy885          236 --VEPAHKSKIVEFLQG-M---NEISAMDSSTGKTELRI  268 (270)
Q Consensus       236 --~tP~~K~~iV~~lq~-~---g~~V~miGDG~ND~~ai  268 (270)
                        ..+..|..+++.+.+ .   ...++|+||+.||+.|.
T Consensus       240 ~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa  278 (317)
T 4eze_A          240 PIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPML  278 (317)
T ss_dssp             SCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             ccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHH
Confidence              134566666665533 2   35699999999998875

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=98.04  E-value=1.4e-05  Score=65.36  Aligned_cols=93  Identities=10%  Similarity=0.057  Sum_probs=70.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++. +++.++|+.....+..+.+.+|+..-   +...++.+.+..             ....-.-.|
T Consensus        69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~---f~~~~~~~~~~~-------------~~~~~~p~p  131 (206)
T 1rku_A           69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL---LCHKLEIDDSDR-------------VVGYQLRQK  131 (206)
T ss_dssp             CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE---EEEEEEECTTSC-------------EEEEECCSS
T ss_pred             CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce---ecceeEEcCCce-------------EEeeecCCC
Confidence            6799999999999999 99999999999999999999998631   101122221100             001112578


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +.|...++.+......++|+||+.||+.|.
T Consensus       132 ~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a  161 (206)
T 1rku_A          132 DPKRQSVIAFKSLYYRVIAAGDSYNDTTML  161 (206)
T ss_dssp             SHHHHHHHHHHHTTCEEEEEECSSTTHHHH
T ss_pred             chHHHHHHHHHhcCCEEEEEeCChhhHHHH
Confidence            899999999988888999999999998775

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.03  E-value=1.1e-05  Score=64.14  Aligned_cols=69  Identities=22%  Similarity=0.164  Sum_probs=54.5

Q ss_pred             HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHHH
Q psy885          167 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVE  246 (270)
Q Consensus       167 ~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV~  246 (270)
                      +++.|++.|+++.++||+....+..+++.+|+.                               ..|...  ..|...++
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------------~~~~~~--kpk~~~~~   85 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD-------------------------------YLFQGV--VDKLSAAE   85 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS-------------------------------EEECSC--SCHHHHHH
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC-------------------------------Eeeccc--CChHHHHH
Confidence            899999999999999999999999999999986                               334333  34555555


Q ss_pred             HHhhC----CCEEEEECCcHhhhhhh
Q psy885          247 FLQGM----NEISAMDSSTGKTELRI  268 (270)
Q Consensus       247 ~lq~~----g~~V~miGDG~ND~~ai  268 (270)
                      .+.+.    ...|+|+||+.||+.|.
T Consensus        86 ~~~~~~~~~~~~~~~vGD~~~Di~~~  111 (164)
T 3e8m_A           86 ELCNELGINLEQVAYIGDDLNDAKLL  111 (164)
T ss_dssp             HHHHHHTCCGGGEEEECCSGGGHHHH
T ss_pred             HHHHHcCCCHHHEEEECCCHHHHHHH
Confidence            44332    35799999999998875

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.02  E-value=7.8e-06  Score=75.27  Aligned_cols=93  Identities=10%  Similarity=0.088  Sum_probs=66.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC---ccceeeechhhcCCCHHHHHHhccCceEEEe
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED---TTGKSYSGREFDDLPLSEQKAAVARARLFSR  235 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~---~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar  235 (270)
                      ++.|++.++++.|++.|+++.++||.....+..+++.+|+..--..   .....++|......                 
T Consensus       256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v-----------------  318 (415)
T 3p96_A          256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPI-----------------  318 (415)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSC-----------------
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCC-----------------
Confidence            7899999999999999999999999999999999999998521000   00011222111100                 


Q ss_pred             cChhhHHHHHHHHhhC-C---CEEEEECCcHhhhhhh
Q psy885          236 VEPAHKSKIVEFLQGM-N---EISAMDSSTGKTELRI  268 (270)
Q Consensus       236 ~tP~~K~~iV~~lq~~-g---~~V~miGDG~ND~~ai  268 (270)
                      ..+..|..+++.+.+. |   ..|.|+|||.||..|+
T Consensus       319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a  355 (415)
T 3p96_A          319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDML  355 (415)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHH
Confidence            1266777777776443 3   4699999999998875

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=97.99  E-value=1.1e-05  Score=68.22  Aligned_cols=42  Identities=17%  Similarity=0.244  Sum_probs=39.0

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ..+.+.+.++|+.|++.|++++++||+....+..+++++|+.
T Consensus        21 ~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~   62 (227)
T 1l6r_A           21 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN   62 (227)
T ss_dssp             SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC
Confidence            457889999999999999999999999999999999999975

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=97.99  E-value=2.6e-05  Score=63.47  Aligned_cols=98  Identities=5%  Similarity=-0.054  Sum_probs=65.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      .+.+++.++++.|++.|+++.++|+.....+..+.+.+|+....-.....+++....  .         . .......+|
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~-~~~~~~~~~  149 (219)
T 3kd3_A           82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS--F---------K-ELDNSNGAC  149 (219)
T ss_dssp             TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB--E---------E-EEECTTSTT
T ss_pred             cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc--e---------e-ccCCCCCCc
Confidence            378999999999999999999999999999999999999852110000011111000  0         0 011123356


Q ss_pred             hhHHHHHHHH-hhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFL-QGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~l-q~~g~~V~miGDG~ND~~ai  268 (270)
                      ..+...+..+ .-...-+.|+||+.||+.|+
T Consensus       150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~  180 (219)
T 3kd3_A          150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLY  180 (219)
T ss_dssp             TCHHHHHHHHGGGCCSEEEEEESSHHHHHHH
T ss_pred             ccHHHHHHHHhCCCCCCEEEEECCHhHHHHH
Confidence            6777776655 43567899999999998875

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=97.93  E-value=1.9e-05  Score=62.61  Aligned_cols=76  Identities=17%  Similarity=0.090  Sum_probs=56.8

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChh
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPA  239 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~  239 (270)
                      +.+++.++|+.|++.|+++.++||.....+..+.+.+|+.                               ..|....| 
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~-------------------------------~~~~~~kp-   84 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE-------------------------------EIYTGSYK-   84 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC-------------------------------EEEECC---
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH-------------------------------hhccCCCC-
Confidence            4577899999999999999999999999999999999986                               23333223 


Q ss_pred             hHHHHHH-HHhhC---CCEEEEECCcHhhhhhh
Q psy885          240 HKSKIVE-FLQGM---NEISAMDSSTGKTELRI  268 (270)
Q Consensus       240 ~K~~iV~-~lq~~---g~~V~miGDG~ND~~ai  268 (270)
                       |...++ .++..   ...++|+||+.||+.|.
T Consensus        85 -~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a  116 (162)
T 2p9j_A           85 -KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVM  116 (162)
T ss_dssp             -CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH
T ss_pred             -CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence             333333 33333   35699999999998764

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=97.92  E-value=1.6e-05  Score=65.02  Aligned_cols=70  Identities=20%  Similarity=0.180  Sum_probs=54.5

Q ss_pred             HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHH
Q psy885          166 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIV  245 (270)
Q Consensus       166 ~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV  245 (270)
                      .+|+.|++.|+++.++||+....+..+++.+|+.                               .+|...  ..|...+
T Consensus        60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~-------------------------------~~~~~~--kpk~~~~  106 (188)
T 2r8e_A           60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGIT-------------------------------HLYQGQ--SNKLIAF  106 (188)
T ss_dssp             HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC-------------------------------EEECSC--SCSHHHH
T ss_pred             HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc-------------------------------eeecCC--CCCHHHH
Confidence            4899999999999999999999999999999986                               333333  3345555


Q ss_pred             HHHh-hCC---CEEEEECCcHhhhhhh
Q psy885          246 EFLQ-GMN---EISAMDSSTGKTELRI  268 (270)
Q Consensus       246 ~~lq-~~g---~~V~miGDG~ND~~ai  268 (270)
                      +.+. +.|   ..|+|+||+.||+.|.
T Consensus       107 ~~~~~~~g~~~~~~~~iGD~~~Di~~a  133 (188)
T 2r8e_A          107 SDLLEKLAIAPENVAYVGDDLIDWPVM  133 (188)
T ss_dssp             HHHHHHHTCCGGGEEEEESSGGGHHHH
T ss_pred             HHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence            5543 334   5799999999998875

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=97.92  E-value=1.9e-05  Score=64.74  Aligned_cols=97  Identities=6%  Similarity=0.019  Sum_probs=64.5

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEec-
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRV-  236 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~-  236 (270)
                      -++.+++.++++.|++.|+++.++|+.....+..+.+.+|+..--    ..+++..+-           .....+...+ 
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~-----------~~~~~~~~~~~  138 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF----SNTLIVEND-----------ALNGLVTGHMM  138 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE----EEEEEEETT-----------EEEEEEEESCC
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc----cceeEEeCC-----------EEEeeeccCCC
Confidence            468999999999999999999999999999999999999986310    111110000           0000011111 


Q ss_pred             ChhhHHHHHHHHhhC----CCEEEEECCcHhhhhhhc
Q psy885          237 EPAHKSKIVEFLQGM----NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       237 tP~~K~~iV~~lq~~----g~~V~miGDG~ND~~ai~  269 (270)
                      ....|..+++.+.+.    ..-+.|+||+.||+.|+.
T Consensus       139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~  175 (217)
T 3m1y_A          139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFK  175 (217)
T ss_dssp             STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHT
T ss_pred             CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHH
Confidence            245666666665432    356899999999988763

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=97.88  E-value=2.9e-05  Score=64.36  Aligned_cols=94  Identities=13%  Similarity=0.228  Sum_probs=63.6

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeech-hhcCCCHHHHHHhccCceEEEec
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGR-EFDDLPLSEQKAAVARARLFSRV  236 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~-~~~~l~~~~~~~~~~~~~v~ar~  236 (270)
                      -++.|++.++++.|++.|+++.++|+.....+..+.+.+|+....      .+... .+.           ....+.+.-
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~------~f~~~~~~~-----------~~~~~~~~~  147 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN------VFANRLKFY-----------FNGEYAGFD  147 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG------EEEECEEEC-----------TTSCEEEEC
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc------EEeeeEEEc-----------CCCcEecCC
Confidence            368999999999999999999999999999999999999986310      11000 000           000111211


Q ss_pred             ------ChhhHHHHHHHHhh-CC-CEEEEECCcHhhhhhh
Q psy885          237 ------EPAHKSKIVEFLQG-MN-EISAMDSSTGKTELRI  268 (270)
Q Consensus       237 ------tP~~K~~iV~~lq~-~g-~~V~miGDG~ND~~ai  268 (270)
                            .+..|-.+++.+.+ .| ..++|+||+.||+.|.
T Consensus       148 ~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a  187 (225)
T 1nnl_A          148 ETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEAC  187 (225)
T ss_dssp             TTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTT
T ss_pred             CCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHH
Confidence                  12367667666543 34 5699999999998764

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=97.84  E-value=3.2e-05  Score=62.89  Aligned_cols=41  Identities=15%  Similarity=0.173  Sum_probs=38.0

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDN-KATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~-~~ta~~iA~~~gi~  199 (270)
                      ++.|++.++|+.|++.|+++.++||.. ...+..+.+.+|+.
T Consensus        68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~  109 (187)
T 2wm8_A           68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF  109 (187)
T ss_dssp             CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred             CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence            678999999999999999999999998 78889999999986

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=97.84  E-value=3.2e-05  Score=62.78  Aligned_cols=96  Identities=13%  Similarity=0.129  Sum_probs=61.7

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEe-c
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSR-V  236 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar-~  236 (270)
                      .++.+++.++++.|++.|+++.++||.....+..+.+.+|+...   ....+.....           .+ ...+... +
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----------~~-~~~~~~~~~  139 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA---FANRLIVKDG-----------KL-TGDVEGEVL  139 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE---EEEEEEEETT-----------EE-EEEEECSSC
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE---EEeeeEEECC-----------EE-cCCcccCcc
Confidence            45778999999999999999999999998888888888887421   0000100000           00 0011111 2


Q ss_pred             ChhhHHHHHHHH-hhCC---CEEEEECCcHhhhhhh
Q psy885          237 EPAHKSKIVEFL-QGMN---EISAMDSSTGKTELRI  268 (270)
Q Consensus       237 tP~~K~~iV~~l-q~~g---~~V~miGDG~ND~~ai  268 (270)
                      .+..|...+..+ ++.|   .-|.|+||+.||+.|+
T Consensus       140 ~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~  175 (211)
T 1l7m_A          140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMF  175 (211)
T ss_dssp             STTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             CCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHH
Confidence            235676666554 3334   4599999999999875

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=97.76  E-value=9e-05  Score=62.51  Aligned_cols=91  Identities=11%  Similarity=0.116  Sum_probs=64.0

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...    ...++++..+...                .-.
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~----f~~~~~~~~~~~~----------------Kp~  172 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL----FSEMLGGQSLPEI----------------KPH  172 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG----CSEEECTTTSSSC----------------TTS
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe----EEEEEecccCCCC----------------CcC
Confidence            35779999999999999999999999999999999999998532    1123433332111                012


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |+--..+++.+.-....|+|+||+.||+.|.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a  203 (243)
T 2hsz_A          173 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAA  203 (243)
T ss_dssp             SHHHHHHHHHHTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHHhCcChhhEEEEcCCHHHHHHH
Confidence            3344445555544445699999999998775

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=97.74  E-value=8.6e-06  Score=65.75  Aligned_cols=88  Identities=11%  Similarity=0.103  Sum_probs=64.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++++++.++++.|++.|+++.++|++....+..+ +.+|+..-   ..........                .--....|
T Consensus        79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~----------------~~~~~~~~  138 (201)
T 4ap9_A           79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM---ANRAIFEDGK----------------FQGIRLRF  138 (201)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE---EEEEEEETTE----------------EEEEECCS
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh---eeeEEeeCCc----------------eECCcCCc
Confidence            7899999999999999999999999988887777 77776421   0000000000                00135577


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      ..|...++.+  ....+.|+||+.||+.|+
T Consensus       139 ~~k~~~l~~l--~~~~~i~iGD~~~Di~~~  166 (201)
T 4ap9_A          139 RDKGEFLKRF--RDGFILAMGDGYADAKMF  166 (201)
T ss_dssp             SCHHHHHGGG--TTSCEEEEECTTCCHHHH
T ss_pred             cCHHHHHHhc--CcCcEEEEeCCHHHHHHH
Confidence            8899999888  456688999999998875

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=97.71  E-value=4.1e-05  Score=63.65  Aligned_cols=91  Identities=16%  Similarity=0.077  Sum_probs=63.7

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      .++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++..+..                ..-.
T Consensus       103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~----------------~kp~  162 (237)
T 4ex6_A          103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL----TVIAGDDSVER----------------GKPH  162 (237)
T ss_dssp             GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC----SEEECTTTSSS----------------CTTS
T ss_pred             CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe----eeEEeCCCCCC----------------CCCC
Confidence            457899999999999999999999999999999999999985321    12333332111                1112


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |+--..+++.+.-...-|+|+||+.||+.|.
T Consensus       163 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a  193 (237)
T 4ex6_A          163 PDMALHVARGLGIPPERCVVIGDGVPDAEMG  193 (237)
T ss_dssp             SHHHHHHHHHHTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHH
Confidence            3333444455544445699999999998875

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=97.71  E-value=3.5e-05  Score=64.86  Aligned_cols=103  Identities=14%  Similarity=0.032  Sum_probs=67.9

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHH--hccCceEEE
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKA--AVARARLFS  234 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~--~~~~~~v~a  234 (270)
                      .-++.|++.++|+.|++.|+++.++|+.....+..+.+  |+...     ..++++.....-  ..+..  .-+....+.
T Consensus        75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-----~~v~~~~~~~~~--~~~~~~~~kp~p~~~~  145 (236)
T 2fea_A           75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-----DRIYCNHASFDN--DYIHIDWPHSCKGTCS  145 (236)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-----GGEEEEEEECSS--SBCEEECTTCCCTTCC
T ss_pred             CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-----CeEEeeeeEEcC--CceEEecCCCCccccc
Confidence            35789999999999999999999999999988888777  76432     123433322100  00000  000001011


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +.+...|..+++.+.-....++|+||+.+|+.|.
T Consensus       146 ~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a  179 (236)
T 2fea_A          146 NQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAA  179 (236)
T ss_dssp             SCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHH
T ss_pred             cccCCcHHHHHHHHhccCCeEEEEeCChHHHHHH
Confidence            1235678899998876678899999999998764

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=97.69  E-value=9e-05  Score=60.53  Aligned_cols=90  Identities=12%  Similarity=0.039  Sum_probs=60.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.+.++.|++.|++++++|+........+.+.+|+...-    ..++++.....                ..-.|
T Consensus        94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~----------------~kp~~  153 (226)
T 1te2_A           94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF----DALASAEKLPY----------------SKPHP  153 (226)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEECTTSSC----------------CTTST
T ss_pred             CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC----cEEEeccccCC----------------CCCCh
Confidence            56799999999999999999999999988888888888875321    12222222110                00113


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      .--..+.+.+.-...-|+++||+.||+.|+
T Consensus       154 ~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a  183 (226)
T 1te2_A          154 QVYLDCAAKLGVDPLTCVALEDSVNGMIAS  183 (226)
T ss_dssp             HHHHHHHHHHTSCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHeEEEeCCHHHHHHH
Confidence            333444444443345689999999998875

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=97.67  E-value=6.7e-05  Score=62.15  Aligned_cols=90  Identities=3%  Similarity=-0.059  Sum_probs=61.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.+...                ..-.|
T Consensus       103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~~----------------~Kp~~  162 (231)
T 3kzx_A          103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF----DSIIGSGDTGT----------------IKPSP  162 (231)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC----SEEEEETSSSC----------------CTTSS
T ss_pred             eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe----eeEEcccccCC----------------CCCCh
Confidence            46899999999999999999999999999999999999986321    11222222110                01122


Q ss_pred             hhHHHHHHHHhhCCC-EEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNE-ISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~-~V~miGDG~ND~~ai  268 (270)
                      +--..+.+.+.-... -|+|+||+.||+.|.
T Consensus       163 ~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a  193 (231)
T 3kzx_A          163 EPVLAALTNINIEPSKEVFFIGDSISDIQSA  193 (231)
T ss_dssp             HHHHHHHHHHTCCCSTTEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccCEEEEcCCHHHHHHH
Confidence            222344444443344 699999999998775

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=97.65  E-value=6.5e-05  Score=61.32  Aligned_cols=91  Identities=13%  Similarity=0.058  Sum_probs=59.0

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+.....+..+.+.+|+..--..  ..++++.. .                ...-.|
T Consensus        70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~i~~~~~-~----------------~~kp~~  130 (205)
T 3m9l_A           70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAE--ADVLGRDE-A----------------PPKPHP  130 (205)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCG--GGEECTTT-S----------------CCTTSS
T ss_pred             CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCc--ceEEeCCC-C----------------CCCCCH
Confidence            4678999999999999999999999999999999999998532100  11222111 0                001122


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+++.+.-...-|+|+||+.||+.|.
T Consensus       131 ~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a  160 (205)
T 3m9l_A          131 GGLLKLAEAWDVSPSRMVMVGDYRFDLDCG  160 (205)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence            222233333322235699999999998775

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=97.65  E-value=0.00012  Score=60.77  Aligned_cols=91  Identities=14%  Similarity=0.154  Sum_probs=63.2

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.++..                ..-.
T Consensus        82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~~----------------~Kp~  141 (222)
T 2nyv_A           82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF----DLIVGGDTFGE----------------KKPS  141 (222)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC----SEEECTTSSCT----------------TCCT
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh----eEEEecCcCCC----------------CCCC
Confidence            356899999999999999999999999999888999999975321    12333322110                1123


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |+--..+++.+.-....++|+||+.||+.|.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a  172 (222)
T 2nyv_A          142 PTPVLKTLEILGEEPEKALIVGDTDADIEAG  172 (222)
T ss_dssp             THHHHHHHHHHTCCGGGEEEEESSHHHHHHH
T ss_pred             hHHHHHHHHHhCCCchhEEEECCCHHHHHHH
Confidence            4444455555544445689999999998764

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=97.62  E-value=0.00012  Score=59.16  Aligned_cols=90  Identities=12%  Similarity=0.046  Sum_probs=62.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.....-                .-.|
T Consensus        89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------kp~~  148 (214)
T 3e58_A           89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF----DIVLSGEEFKES----------------KPNP  148 (214)
T ss_dssp             HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGCSSC----------------TTSS
T ss_pred             CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe----eeEeecccccCC----------------CCCh
Confidence            57899999999999999999999999999999999999986321    123333322111                1123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+.+.+.-...-|+++||+.||+.|.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a  178 (214)
T 3e58_A          149 EIYLTALKQLNVQASRALIIEDSEKGIAAG  178 (214)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSHHHHHHH
T ss_pred             HHHHHHHHHcCCChHHeEEEeccHhhHHHH
Confidence            333444444443445699999999998775

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=97.61  E-value=8e-05  Score=61.25  Aligned_cols=91  Identities=9%  Similarity=-0.013  Sum_probs=60.3

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.....-                .-.
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------kp~  144 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF----DAIVGSSLDGKL----------------STK  144 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC----SEEEEECTTSSS----------------CSH
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe----eeeeccCCCCCC----------------CCC
Confidence            357899999999999999999999999999999999999986321    112222211100                001


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |+--..+.+.+.-...-|+|+||+.||+.|.
T Consensus       145 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a  175 (226)
T 3mc1_A          145 EDVIRYAMESLNIKSDDAIMIGDREYDVIGA  175 (226)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHHhCcCcccEEEECCCHHHHHHH
Confidence            2222223333332335799999999998875

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=97.53  E-value=0.0001  Score=61.44  Aligned_cols=87  Identities=10%  Similarity=0.017  Sum_probs=59.8

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.....                    
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~--------------------  164 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF----KYIAGSNLDGT--------------------  164 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC----SEEEEECTTSC--------------------
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE----EEEEeccccCC--------------------
Confidence            357899999999999999999999999999999999999986321    11222221110                    


Q ss_pred             hhhHHHHHH----HHhhC-CCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVE----FLQGM-NEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~----~lq~~-g~~V~miGDG~ND~~ai  268 (270)
                      +.-|..+++    .+.-. ..-|+++||+.||+.|.
T Consensus       165 ~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a  200 (240)
T 3sd7_A          165 RVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGA  200 (240)
T ss_dssp             CCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHH
Confidence            112333333    33333 45689999999998764

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=97.50  E-value=7.4e-05  Score=59.95  Aligned_cols=89  Identities=10%  Similarity=0.012  Sum_probs=59.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      .+.+++.++++.|++.|+++.++|+....... +.+.+|+...    ...++.+.....                ..-.|
T Consensus        85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~----f~~~~~~~~~~~----------------~Kp~~  143 (207)
T 2go7_A           85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY----FTEILTSQSGFV----------------RKPSP  143 (207)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG----EEEEECGGGCCC----------------CTTSS
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh----eeeEEecCcCCC----------------CCCCc
Confidence            36899999999999999999999999888777 7777887521    112222222110                00113


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+.+.+.-....|+++||+.||+.|+
T Consensus       144 ~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~  173 (207)
T 2go7_A          144 EAATYLLDKYQLNSDNTYYIGDRTLDVEFA  173 (207)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHhCCCcccEEEECCCHHHHHHH
Confidence            333345555543445689999999998875

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=97.49  E-value=0.00011  Score=60.42  Aligned_cols=91  Identities=5%  Similarity=-0.063  Sum_probs=60.1

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.....                ..-.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~----------------~kp~  149 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK----INIVTRDDVSY----------------GKPD  149 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS----SCEECGGGSSC----------------CTTS
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh----heeeccccCCC----------------CCCC
Confidence            346799999999999999999999999999999998888886421    12333332210                0011


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |.--..+.+.+.-...-|+|+||+.||+.|.
T Consensus       150 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a  180 (233)
T 3s6j_A          150 PDLFLAAAKKIGAPIDECLVIGDAIWDMLAA  180 (233)
T ss_dssp             THHHHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred             hHHHHHHHHHhCCCHHHEEEEeCCHHhHHHH
Confidence            2222223333322235699999999998775

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=97.45  E-value=0.00017  Score=59.66  Aligned_cols=88  Identities=10%  Similarity=0.046  Sum_probs=56.0

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+...  +..+.+.+|+...-    ..++++...                -...-.|
T Consensus        92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f----~~i~~~~~~----------------~~~Kp~~  149 (233)
T 3nas_A           92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF----HAIVDPTTL----------------AKGKPDP  149 (233)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC----SEECCC-------------------------C
T ss_pred             CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc----CEEeeHhhC----------------CCCCCCh
Confidence            3789999999999999999999999754  66677888875321    122222211                0111122


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +-=..+++.+.-...-|+|+||+.||+.|.
T Consensus       150 ~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a  179 (233)
T 3nas_A          150 DIFLTAAAMLDVSPADCAAIEDAEAGISAI  179 (233)
T ss_dssp             CHHHHHHHHHTSCGGGEEEEECSHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHEEEEeCCHHHHHHH
Confidence            222445555544446799999999998775

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=97.43  E-value=0.00029  Score=57.90  Aligned_cols=91  Identities=12%  Similarity=0.093  Sum_probs=61.4

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.....-                .-.
T Consensus        95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------kp~  154 (230)
T 3um9_A           95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF----DHLISVDEVRLF----------------KPH  154 (230)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC----SEEEEGGGTTCC----------------TTC
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc----ceeEehhhcccC----------------CCC
Confidence            467899999999999999999999999999888888899985321    123333222110                011


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |.--..+.+.+.-...-+.|+||+.||+.|.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a  185 (230)
T 3um9_A          155 QKVYELAMDTLHLGESEILFVSCNSWDATGA  185 (230)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEESCHHHHHHH
T ss_pred             hHHHHHHHHHhCCCcccEEEEeCCHHHHHHH
Confidence            2222333444433345689999999998775

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=97.42  E-value=0.00076  Score=56.13  Aligned_cols=90  Identities=11%  Similarity=0.058  Sum_probs=61.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.....-                .-.|
T Consensus       105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------Kp~~  164 (240)
T 2no4_A          105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL----DSCLSADDLKIY----------------KPDP  164 (240)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGTTCC----------------TTSH
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc----CEEEEccccCCC----------------CCCH
Confidence            67899999999999999999999999999888888999985321    123333322110                1123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+.+.+.-...-++|+||+.||+.|.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a  194 (240)
T 2no4_A          165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGA  194 (240)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccEEEEeCCHHHHHHH
Confidence            333334444433345688999999998764

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=97.42  E-value=0.00013  Score=59.61  Aligned_cols=89  Identities=10%  Similarity=0.037  Sum_probs=56.5

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChh
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPA  239 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~  239 (270)
                      +.+++.+.++.|++.|+++.++|+........+.+.+|+...-    ..++++.....-                .-.|.
T Consensus        90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----------------k~~~~  149 (225)
T 3d6j_A           90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF----DIIIGGEDVTHH----------------KPDPE  149 (225)
T ss_dssp             ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC----SEEECGGGCSSC----------------TTSTH
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe----eeeeehhhcCCC----------------CCChH
Confidence            4689999999999999999999999988888888888875321    122322221100                00111


Q ss_pred             hHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          240 HKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       240 ~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      --..+++.+.-...-|.++||+.||+.|+
T Consensus       150 ~~~~~~~~~~~~~~~~i~iGD~~nDi~~~  178 (225)
T 3d6j_A          150 GLLLAIDRLKACPEEVLYIGDSTVDAGTA  178 (225)
T ss_dssp             HHHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHhCCChHHeEEEcCCHHHHHHH
Confidence            11223333322234588999999998875

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=97.40  E-value=0.00038  Score=55.67  Aligned_cols=39  Identities=18%  Similarity=0.211  Sum_probs=32.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNK---------------ATAEAICRRIG  197 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~---------------~ta~~iA~~~g  197 (270)
                      ++.|++.++|+.|++.|+++.++|+...               ..+..+.+.+|
T Consensus        27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g   80 (179)
T 3l8h_A           27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG   80 (179)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999875               45556666777

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=97.38  E-value=0.00049  Score=59.52  Aligned_cols=87  Identities=11%  Similarity=0.087  Sum_probs=65.7

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceE
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNK----ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARL  232 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~----~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v  232 (270)
                      ..++.|++.++|+.|++.|+++.+|||=..    ..+..-.+.+||..-...                          .+
T Consensus        99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~--------------------------~L  152 (260)
T 3pct_A           99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK--------------------------TL  152 (260)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT--------------------------TE
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc--------------------------ee
Confidence            467889999999999999999999998643    466666678899632110                          24


Q ss_pred             EEecChhhHHHHHHHHhhCC-CEEEEECCcHhhhhhhc
Q psy885          233 FSRVEPAHKSKIVEFLQGMN-EISAMDSSTGKTELRIF  269 (270)
Q Consensus       233 ~ar~tP~~K~~iV~~lq~~g-~~V~miGDG~ND~~ai~  269 (270)
                      +-|.....|....+.|.+.| .+|+++||-.+|..+.|
T Consensus       153 ilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~~~  190 (260)
T 3pct_A          153 LLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGDAT  190 (260)
T ss_dssp             EEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCGGG
T ss_pred             EecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCccc
Confidence            44434567888888888854 57899999999987644

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=97.38  E-value=0.00067  Score=58.15  Aligned_cols=95  Identities=15%  Similarity=0.002  Sum_probs=61.3

Q ss_pred             CCCchhHHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEe
Q psy885          158 DPPRKEVFDSIARCRAAGI--RVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSR  235 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi--~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar  235 (270)
                      -++.+++.++++.|++.|+  ++.++|+.....+..+.+.+|+...-    ..++++......            ...+.
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f----d~v~~~~~~~~~------------~~~~K  204 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF----DGLTYCDYSRTD------------TLVCK  204 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC----SEEECCCCSSCS------------SCCCT
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc----ceEEEeccCCCc------------ccCCC
Confidence            3578999999999999999  99999999999999999999986321    112222211100            01111


Q ss_pred             cChhhHHHHHHHHhhCC-CEEEEECCcHhhhhhh
Q psy885          236 VEPAHKSKIVEFLQGMN-EISAMDSSTGKTELRI  268 (270)
Q Consensus       236 ~tP~~K~~iV~~lq~~g-~~V~miGDG~ND~~ai  268 (270)
                      -.|+-=..+.+.+.-.. .-|.|+||+.||+.|.
T Consensus       205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a  238 (282)
T 3nuq_A          205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETG  238 (282)
T ss_dssp             TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHH
T ss_pred             cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHH
Confidence            12222223333333334 6799999999998775

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=97.34  E-value=0.00067  Score=56.01  Aligned_cols=90  Identities=12%  Similarity=0.084  Sum_probs=61.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.....                ..-.|
T Consensus        95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~----------------~Kp~~  154 (232)
T 1zrn_A           95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF----DHLLSVDPVQV----------------YKPDN  154 (232)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEESGGGTC----------------CTTSH
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh----heEEEecccCC----------------CCCCH
Confidence            57799999999999999999999999998888888888885321    12333322211                11123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+.+.+.-...-++|+||+.||+.|.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a  184 (232)
T 1zrn_A          155 RVYELAEQALGLDRSAILFVASNAWDATGA  184 (232)
T ss_dssp             HHHHHHHHHHTSCGGGEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccEEEEeCCHHHHHHH
Confidence            333344444443345688999999998764

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=97.30  E-value=0.00028  Score=58.13  Aligned_cols=42  Identities=12%  Similarity=0.105  Sum_probs=37.4

Q ss_pred             CCchhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          159 PPRKEVFDSIARCRAA-GIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~a-gi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      ++.+++.++++.|++. |+++.++|+.....+..+.+.+|+..
T Consensus        93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~  135 (234)
T 2hcf_A           93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH  135 (234)
T ss_dssp             EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred             CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh
Confidence            3679999999999999 99999999999988888888888753

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=97.29  E-value=0.00033  Score=58.50  Aligned_cols=90  Identities=11%  Similarity=-0.062  Sum_probs=59.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.....-                .-.|
T Consensus        94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------Kp~~  153 (241)
T 2hoq_A           94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF----EHVIISDFEGVK----------------KPHP  153 (241)
T ss_dssp             CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTCC----------------TTCH
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc----cEEEEeCCCCCC----------------CCCH
Confidence            57899999999999999999999999988888888888875321    123333222110                0112


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcH-hhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTG-KTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~-ND~~ai  268 (270)
                      +-=..+.+.+.-...-++|+||+. ||+.|.
T Consensus       154 ~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a  184 (241)
T 2hoq_A          154 KIFKKALKAFNVKPEEALMVGDRLYSDIYGA  184 (241)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCTTTTHHHH
T ss_pred             HHHHHHHHHcCCCcccEEEECCCchHhHHHH
Confidence            221233333333345689999998 998764

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=97.28  E-value=0.00034  Score=59.16  Aligned_cols=92  Identities=12%  Similarity=-0.131  Sum_probs=62.0

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      .++.+++.++++.|++.|+++.++|+.....+..+.+.+|+..-.   ...++++.....-                .-.
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~----------------kp~  170 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT---PASTVFATDVVRG----------------RPF  170 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC---CSEEECGGGSSSC----------------TTS
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC---CceEecHHhcCCC----------------CCC
Confidence            367899999999999999999999999998888888888865321   1123333321110                112


Q ss_pred             hhhHHHHHHHHhhCC-CEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMN-EISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g-~~V~miGDG~ND~~ai  268 (270)
                      |.-=..+.+.+.-.. .-|+|+||+.||+.|.
T Consensus       171 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a  202 (277)
T 3iru_A          171 PDMALKVALELEVGHVNGCIKVDDTLPGIEEG  202 (277)
T ss_dssp             SHHHHHHHHHHTCSCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCccEEEEcCCHHHHHHH
Confidence            222233444444444 6799999999998775

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=97.25  E-value=0.00042  Score=58.06  Aligned_cols=89  Identities=10%  Similarity=0.080  Sum_probs=56.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+.....+..+.+.+|+. .-    ..++++.....-                .-.|
T Consensus       110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f----~~~~~~~~~~~~----------------Kp~p  168 (240)
T 2hi0_A          110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SF----DFALGEKSGIRR----------------KPAP  168 (240)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TC----SEEEEECTTSCC----------------TTSS
T ss_pred             CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ce----eEEEecCCCCCC----------------CCCH
Confidence            35689999999999999999999999888888888888874 21    123333221100                0011


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +-=..+.+.+.-...-++|+||+.||+.|.
T Consensus       169 ~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a  198 (240)
T 2hi0_A          169 DMTSECVKVLGVPRDKCVYIGDSEIDIQTA  198 (240)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHeEEEcCCHHHHHHH
Confidence            111222333322335689999999998764

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=97.24  E-value=0.00085  Score=54.10  Aligned_cols=89  Identities=15%  Similarity=0.062  Sum_probs=59.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.| ++.++|+........+.+.+|+...-    ..++++.....                ..-.|
T Consensus        86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f----~~~~~~~~~~~----------------~Kp~~  144 (200)
T 3cnh_A           86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL----LAFFTSSALGV----------------MKPNP  144 (200)
T ss_dssp             CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC----SCEEEHHHHSC----------------CTTCH
T ss_pred             ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc----ceEEeecccCC----------------CCCCH
Confidence            47899999999999999 99999999999888888888875321    12333322211                11123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+++.+.-...-++|+||+.||+.|.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a  174 (200)
T 3cnh_A          145 AMYRLGLTLAQVRPEEAVMVDDRLQNVQAA  174 (200)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHeEEeCCCHHHHHHH
Confidence            333334444433345689999999997764

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=97.24  E-value=0.00016  Score=54.79  Aligned_cols=41  Identities=12%  Similarity=0.242  Sum_probs=35.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus        18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~   58 (137)
T 2pr7_A           18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN   58 (137)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence            46789999999999999999999999888877777788764

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=97.24  E-value=0.00037  Score=58.95  Aligned_cols=92  Identities=15%  Similarity=0.040  Sum_probs=62.0

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      .++.+++.++++.|++.|+++.++|++....+..+.+.+|+....   ...++++.....                ..-.
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~----------------~kp~  162 (267)
T 1swv_A          102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK---PDFLVTPDDVPA----------------GRPY  162 (267)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC---CSCCBCGGGSSC----------------CTTS
T ss_pred             cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC---hHheecCCccCC----------------CCCC
Confidence            356799999999999999999999999988888888887764221   012333322110                0113


Q ss_pred             hhhHHHHHHHHhhCC-CEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMN-EISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g-~~V~miGDG~ND~~ai  268 (270)
                      |+--..+++.+.-.. .-|+|+||+.||+.|+
T Consensus       163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a  194 (267)
T 1swv_A          163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEG  194 (267)
T ss_dssp             SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHH
Confidence            444444555554444 5799999999998875

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=97.20  E-value=0.0003  Score=59.35  Aligned_cols=92  Identities=12%  Similarity=0.064  Sum_probs=59.9

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccce-eeechhhcCCCHHHHHHhccCceEEEec
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGK-SYSGREFDDLPLSEQKAAVARARLFSRV  236 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~-~i~G~~~~~l~~~~~~~~~~~~~v~ar~  236 (270)
                      -++.+++.++++.|++.|+++.++|+.....+..+.+.+|+..--    .. ++++.....               ...-
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~i~~~~~~~~---------------~~Kp  169 (259)
T 4eek_A          109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA----GEHIYDPSWVGG---------------RGKP  169 (259)
T ss_dssp             CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH----CSCEECGGGGTT---------------CCTT
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc----cceEEeHhhcCc---------------CCCC
Confidence            456799999999999999999999999999999998888874210    11 233322210               0011


Q ss_pred             ChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          237 EPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       237 tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      .|+-=..+.+.+.-...-|+|+||+.||+.|.
T Consensus       170 ~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a  201 (259)
T 4eek_A          170 HPDLYTFAAQQLGILPERCVVIEDSVTGGAAG  201 (259)
T ss_dssp             SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred             ChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHH
Confidence            12222233333322335699999999998775

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=97.17  E-value=0.00093  Score=55.31  Aligned_cols=41  Identities=15%  Similarity=0.123  Sum_probs=35.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNK---------------ATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~---------------~ta~~iA~~~gi~  199 (270)
                      ++.+++.++|+.|++.|+++.++|+...               ..+..+.+.+|+.
T Consensus        50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~  105 (211)
T 2gmw_A           50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD  105 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred             cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence            6789999999999999999999999983               5667777788874

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=97.16  E-value=0.00096  Score=54.90  Aligned_cols=91  Identities=13%  Similarity=0.028  Sum_probs=61.3

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-    ..++++.....-                .-.
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------kp~  157 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF----DHVLSVDAVRLY----------------KTA  157 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC----SEEEEGGGTTCC----------------TTS
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc----CEEEEecccCCC----------------CcC
Confidence            456799999999999999999999999999988888888876321    123333322111                112


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |+--..+.+.+.-...-++|+||+.||+.|.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a  188 (233)
T 3umb_A          158 PAAYALAPRAFGVPAAQILFVSSNGWDACGA  188 (233)
T ss_dssp             HHHHTHHHHHHTSCGGGEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHhCCCcccEEEEeCCHHHHHHH
Confidence            2222334444433345689999999998764

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=97.16  E-value=0.0009  Score=54.30  Aligned_cols=94  Identities=10%  Similarity=0.084  Sum_probs=59.7

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNK---ATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~---~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      -++.+++.++++.|++.|+++.++|+-..   ..+..+.+.+|+..--    ..++++.+....            .-..
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f----d~i~~~~~~~~~------------~~~~   96 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF----DFIYASNSELQP------------GKME   96 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE----EEEEECCTTSST------------TCCC
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe----EEEEEccccccc------------cCCC
Confidence            35889999999999999999999998765   7888888899985311    122222221000            0011


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCc-Hhhhhh
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSST-GKTELR  267 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG-~ND~~a  267 (270)
                      .-.|+-=..+++.+.-...-++||||+ .+|+.|
T Consensus        97 KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~  130 (189)
T 3ib6_A           97 KPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIG  130 (189)
T ss_dssp             TTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHH
T ss_pred             CcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHH
Confidence            113333334444444334679999999 799765

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.15  E-value=0.00058  Score=55.83  Aligned_cols=81  Identities=12%  Similarity=0.033  Sum_probs=58.6

Q ss_pred             CCchhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          159 PPRKEVFDSIARCRAAG-IRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~ag-i~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      ++.+++.++++.|++.| +++.++|+........+.+.+|+...-.                           .+++...
T Consensus       105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------~~~~~~k  157 (234)
T 3ddh_A          105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------HIEVMSD  157 (234)
T ss_dssp             CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS---------------------------EEEEESC
T ss_pred             CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh---------------------------eeeecCC
Confidence            57899999999999999 9999999998888888888888853211                           2333333


Q ss_pred             hhhHHHHHHHH-hhC---CCEEEEECCcH-hhhhhh
Q psy885          238 PAHKSKIVEFL-QGM---NEISAMDSSTG-KTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~l-q~~---g~~V~miGDG~-ND~~ai  268 (270)
                      |  |...++.+ +..   ..-|+|+||+. ||+.|.
T Consensus       158 p--k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a  191 (234)
T 3ddh_A          158 K--TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPV  191 (234)
T ss_dssp             C--SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHH
T ss_pred             C--CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHH
Confidence            3  44444433 322   35699999996 998764

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=97.13  E-value=0.00077  Score=59.88  Aligned_cols=40  Identities=15%  Similarity=0.076  Sum_probs=35.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ++++++.++++.|++ |+.+.++||+....+..++..+++.
T Consensus       103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~  142 (332)
T 1y8a_A          103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVR  142 (332)
T ss_dssp             CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhh
Confidence            679999999999999 9999999999977777777777774

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=97.11  E-value=0.00078  Score=58.34  Aligned_cols=86  Identities=12%  Similarity=0.054  Sum_probs=64.1

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceE
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDN----KATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARL  232 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~----~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v  232 (270)
                      ..++.|++.++++.|++.|+++.+|||=.    ...+..-.+.+||..-...                          .+
T Consensus        99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~--------------------------~L  152 (262)
T 3ocu_A           99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEES--------------------------AF  152 (262)
T ss_dssp             CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGG--------------------------GE
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccccc--------------------------ce
Confidence            46789999999999999999999999764    3466666678898631100                          23


Q ss_pred             EEecChhhHHHHHHHHhhCC-CEEEEECCcHhhhhhh
Q psy885          233 FSRVEPAHKSKIVEFLQGMN-EISAMDSSTGKTELRI  268 (270)
Q Consensus       233 ~ar~tP~~K~~iV~~lq~~g-~~V~miGDG~ND~~ai  268 (270)
                      +-|..-..|....+.|.+.| .+|+++||-.+|..+-
T Consensus       153 ilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~~  189 (262)
T 3ocu_A          153 YLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNT  189 (262)
T ss_dssp             EEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCST
T ss_pred             eccCCCCChHHHHHHHHhcCCCEEEEECCChHHhccc
Confidence            33434467888888888774 5789999999998753

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=97.08  E-value=0.00012  Score=59.75  Aligned_cols=89  Identities=9%  Similarity=0.054  Sum_probs=57.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++. +++.++|+.....+..+.+.+|+...    ...++++.+...-                .-.|
T Consensus        83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~----f~~~~~~~~~~~~----------------KP~~  141 (209)
T 2hdo_A           83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR----MAVTISADDTPKR----------------KPDP  141 (209)
T ss_dssp             EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG----EEEEECGGGSSCC----------------TTSS
T ss_pred             CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh----ccEEEecCcCCCC----------------CCCc
Confidence            4689999999999999 99999999998888888888877421    1122222221000                0012


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+.+.+.-....|+|+||+.||+.|.
T Consensus       142 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a  171 (209)
T 2hdo_A          142 LPLLTALEKVNVAPQNALFIGDSVSDEQTA  171 (209)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccEEEECCChhhHHHH
Confidence            222333344333345699999999998765

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=97.01  E-value=0.00062  Score=56.50  Aligned_cols=92  Identities=5%  Similarity=-0.033  Sum_probs=57.3

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++.|+++.++|+.....+....+. |+..--.  ...++++.....                ..-.
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~--~~~~~~~~~~~~----------------~kp~  167 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQ--ANLMVTAFDVKY----------------GKPN  167 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCC--GGGEECGGGCSS----------------CTTS
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcC--CCeEEecccCCC----------------CCCC
Confidence            46789999999999999999999999887777766666 7753210  012343333211                1112


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |+-=..+.+.+.-...-|+|+||+.||+.|.
T Consensus       168 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a  198 (247)
T 3dv9_A          168 PEPYLMALKKGGFKPNEALVIENAPLGVQAG  198 (247)
T ss_dssp             SHHHHHHHHHHTCCGGGEEEEECSHHHHHHH
T ss_pred             CHHHHHHHHHcCCChhheEEEeCCHHHHHHH
Confidence            3333344444443345689999999998774

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=96.97  E-value=0.0015  Score=53.10  Aligned_cols=88  Identities=8%  Similarity=-0.021  Sum_probs=54.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.+.++.|++.|+++.++|++  ..+..+.+.+|+...-    ..++++.....-                .-.|
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------Kp~~  148 (221)
T 2wf7_A           91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF----DAIADPAEVAAS----------------KPAP  148 (221)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC----SEECCTTTSSSC----------------TTSS
T ss_pred             CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc----ceEeccccCCCC----------------CCCh
Confidence            46799999999999999999999998  3445566777765321    122333221110                0112


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+.+.+.-...-|.++||+.||+.|+
T Consensus       149 ~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a  178 (221)
T 2wf7_A          149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAI  178 (221)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHeEEEeCCHHHHHHH
Confidence            222333333332335689999999998875

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=96.96  E-value=0.0011  Score=57.09  Aligned_cols=42  Identities=12%  Similarity=0.150  Sum_probs=34.2

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDN---KATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~---~~ta~~iA~~~gi~  199 (270)
                      .++.|++.++|+.|++.|+++.++||-.   .......-+.+|+.
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~  144 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP  144 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999976   44444555677886

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=96.94  E-value=0.00077  Score=54.57  Aligned_cols=86  Identities=8%  Similarity=0.071  Sum_probs=58.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.+ ++.|++. +++.++|+.....+..+.+.+|+...-    ..++++.+...-                .-.|
T Consensus        74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------Kp~~  131 (201)
T 2w43_A           74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF----KGIFSAESVKEY----------------KPSP  131 (201)
T ss_dssp             EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTCC----------------TTCH
T ss_pred             ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC----cEEEehhhcCCC----------------CCCH
Confidence            56799999 9999999 999999999988888888899885321    123333322111                1123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+++.+.  ..-++|+||+.||+.|.
T Consensus       132 ~~~~~~~~~~~--~~~~~~vGD~~~Di~~a  159 (201)
T 2w43_A          132 KVYKYFLDSIG--AKEAFLVSSNAFDVIGA  159 (201)
T ss_dssp             HHHHHHHHHHT--CSCCEEEESCHHHHHHH
T ss_pred             HHHHHHHHhcC--CCcEEEEeCCHHHhHHH
Confidence            33344455554  45688999999998764

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=96.93  E-value=0.0051  Score=50.08  Aligned_cols=89  Identities=12%  Similarity=0.065  Sum_probs=60.3

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..--    ..++++.++...                .-.|
T Consensus        84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f----d~~~~~~~~~~~----------------KP~p  143 (216)
T 3kbb_A           84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF----DVMVFGDQVKNG----------------KPDP  143 (216)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC----SEEECGGGSSSC----------------TTST
T ss_pred             ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc----cccccccccCCC----------------cccH
Confidence            46799999999999999999999999999999999999986421    123333332211                1123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +-=..+.+.+.-...-++||||..+|+.|
T Consensus       144 ~~~~~a~~~lg~~p~e~l~VgDs~~Di~a  172 (216)
T 3kbb_A          144 EIYLLVLERLNVVPEKVVVFEDSKSGVEA  172 (216)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSHHHHHH
T ss_pred             HHHHHHHHhhCCCccceEEEecCHHHHHH
Confidence            22223333333333568899999999654

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=96.91  E-value=0.002  Score=51.22  Aligned_cols=87  Identities=10%  Similarity=-0.067  Sum_probs=54.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      .+.+++.++++.|++.|+++.++|+... .+..+.+.+|+...    ...++++..+..-                .-.|
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~----f~~~~~~~~~~~~----------------kp~~  140 (190)
T 2fi1_A           82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY----FTEVVTSSSGFKR----------------KPNP  140 (190)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG----EEEEECGGGCCCC----------------TTSC
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh----eeeeeeccccCCC----------------CCCH
Confidence            3689999999999999999999998764 45666677777521    1122333221100                0112


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+.+.+.-.  -|+++||+.||+.|.
T Consensus       141 ~~~~~~~~~~~~~--~~~~iGD~~~Di~~a  168 (190)
T 2fi1_A          141 ESMLYLREKYQIS--SGLVIGDRPIDIEAG  168 (190)
T ss_dssp             HHHHHHHHHTTCS--SEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHcCCC--eEEEEcCCHHHHHHH
Confidence            2222333333222  689999999998775

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=96.91  E-value=0.0031  Score=51.60  Aligned_cols=90  Identities=12%  Similarity=0.053  Sum_probs=58.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEe
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDN---KATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSR  235 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~---~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar  235 (270)
                      .+.+++.++++.|++.|+++.++|+..   ......+.+.+|+...-    ..++.+.++....                
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~k----------------  158 (235)
T 2om6_A           99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI----DKTFFADEVLSYK----------------  158 (235)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC----SEEEEHHHHTCCT----------------
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh----hhheeccccCCCC----------------
Confidence            358999999999999999999999999   88888888888875321    1233333221110                


Q ss_pred             cChhhHHHHHHHHhhCCCEEEEECCcH-hhhhhh
Q psy885          236 VEPAHKSKIVEFLQGMNEISAMDSSTG-KTELRI  268 (270)
Q Consensus       236 ~tP~~K~~iV~~lq~~g~~V~miGDG~-ND~~ai  268 (270)
                      -.|+-=..+.+.+.-...-|+++||+. ||+.|.
T Consensus       159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a  192 (235)
T 2om6_A          159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGA  192 (235)
T ss_dssp             TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHH
T ss_pred             CCHHHHHHHHHHcCCCccceEEECCChHHHHHHH
Confidence            112211222222222235689999999 998775

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=96.87  E-value=0.0023  Score=52.99  Aligned_cols=42  Identities=31%  Similarity=0.440  Sum_probs=36.1

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNK---------------ATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~---------------~ta~~iA~~~gi~  199 (270)
                      .++.+++.++|+.|++.|+++.++|+-..               ..+..+.+.+|+.
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~  111 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF  111 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc
Confidence            46789999999999999999999999876               5667777888873

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=96.86  E-value=0.00091  Score=55.75  Aligned_cols=92  Identities=5%  Similarity=-0.049  Sum_probs=57.2

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++.|+++.++|+.....+....+. |+..--.  ...++++..+..-                .-.
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~--~d~i~~~~~~~~~----------------kp~  168 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFH--KELMVTAFDVKYG----------------KPN  168 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCC--GGGEECTTTCSSC----------------TTS
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcC--cceEEeHHhCCCC----------------CCC
Confidence            46789999999999999999999999887776666666 7653210  0123444332111                112


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |+-=..+.+.+.-...-|+|+||+.||+.|.
T Consensus       169 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a  199 (243)
T 3qxg_A          169 PEPYLMALKKGGLKADEAVVIENAPLGVEAG  199 (243)
T ss_dssp             SHHHHHHHHHTTCCGGGEEEEECSHHHHHHH
T ss_pred             hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHH
Confidence            2222223333322235689999999998775

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=96.84  E-value=0.0014  Score=53.67  Aligned_cols=83  Identities=16%  Similarity=0.161  Sum_probs=57.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++ |+++.++|+.....+..+.+.+|+..--.    .                      .+.+...+
T Consensus        84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----~----------------------i~~~~~~~  136 (210)
T 2ah5_A           84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----G----------------------IYGSSPEA  136 (210)
T ss_dssp             EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS----E----------------------EEEECSSC
T ss_pred             CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee----e----------------------eecCCCCC
Confidence            467999999999999 99999999988888888888889863211    1                      12222112


Q ss_pred             hhHHHHHHH-HhhCC---CEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEF-LQGMN---EISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~-lq~~g---~~V~miGDG~ND~~ai  268 (270)
                      .-|-.++.. ++..|   .-++|+||+.||+.|.
T Consensus       137 Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a  170 (210)
T 2ah5_A          137 PHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGA  170 (210)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred             CCChHHHHHHHHHcCCCcccEEEECCCHHHHHHH
Confidence            234444443 44444   4589999999998663

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=96.82  E-value=0.0016  Score=52.86  Aligned_cols=89  Identities=11%  Similarity=0.025  Sum_probs=56.0

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------hCCCCCCCCccceeeechhhcCCCHHHHHHhccCceE
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR------IGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARL  232 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~------~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v  232 (270)
                      ++.+++.++++.|++ |+++.++|+.....+..+.+.      .|+...-    ..++++.....               
T Consensus        89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f----~~~~~~~~~~~---------------  148 (211)
T 2i6x_A           89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF----DKVYASCQMGK---------------  148 (211)
T ss_dssp             EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS----SEEEEHHHHTC---------------
T ss_pred             ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc----CeEEeecccCC---------------
Confidence            467999999999999 999999999888777776665      5553211    12222222110               


Q ss_pred             EEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          233 FSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       233 ~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                       ..-.|+--..+++.+.-...-++|+||+.||+.|.
T Consensus       149 -~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a  183 (211)
T 2i6x_A          149 -YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATA  183 (211)
T ss_dssp             -CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHH
Confidence             11122233334444433345699999999998764

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=96.78  E-value=0.0053  Score=51.54  Aligned_cols=88  Identities=13%  Similarity=0.056  Sum_probs=59.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|+  |+++.++|+.....+..+.+.+|+...-    ..++++.....                ..-.|
T Consensus        93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~~~----------------~Kp~~  150 (253)
T 1qq5_A           93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF----DAVISVDAKRV----------------FKPHP  150 (253)
T ss_dssp             CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTC----------------CTTSH
T ss_pred             CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc----cEEEEccccCC----------------CCCCH
Confidence            67899999999999  9999999999999998888899875321    12333332211                11123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      +--..+++.+.-....++|+||+.||+.|.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a  180 (253)
T 1qq5_A          151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGA  180 (253)
T ss_dssp             HHHHHHHHHHCCCGGGEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHEEEEeCChhhHHHH
Confidence            333334444433335689999999998764

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=96.76  E-value=0.0022  Score=53.73  Aligned_cols=82  Identities=16%  Similarity=0.069  Sum_probs=57.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC-
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE-  237 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t-  237 (270)
                      ++.+++.++++.|+ .|+++.++|+.....+..+.+.+|+...-.                           .+++... 
T Consensus       112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------~i~~~~kp  163 (251)
T 2pke_A          112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP---------------------------RIEVVSEK  163 (251)
T ss_dssp             CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC---------------------------CEEEESCC
T ss_pred             CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc---------------------------eeeeeCCC
Confidence            56899999999999 999999999999888888888888753211                           2222222 


Q ss_pred             -hhhHHHHHHHHhhCCCEEEEECCcH-hhhhhh
Q psy885          238 -PAHKSKIVEFLQGMNEISAMDSSTG-KTELRI  268 (270)
Q Consensus       238 -P~~K~~iV~~lq~~g~~V~miGDG~-ND~~ai  268 (270)
                       |+-=..+.+.+.-...-|+++||+. ||+.|.
T Consensus       164 ~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a  196 (251)
T 2pke_A          164 DPQTYARVLSEFDLPAERFVMIGNSLRSDVEPV  196 (251)
T ss_dssp             SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHH
T ss_pred             CHHHHHHHHHHhCcCchhEEEECCCchhhHHHH
Confidence             3222333344433345699999999 998764

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=96.74  E-value=0.0035  Score=53.63  Aligned_cols=89  Identities=8%  Similarity=-0.140  Sum_probs=60.3

Q ss_pred             CCchhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          159 PPRKEVFDSIARCRAA-GIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~a-gi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      .+.+++.++++.|++. |+++.++|+.....+..+.+.+|+..     ...++++.+...-.                -.
T Consensus       114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~-----f~~i~~~~~~~~~k----------------p~  172 (275)
T 2qlt_A          114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR-----PEYFITANDVKQGK----------------PH  172 (275)
T ss_dssp             EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC-----CSSEECGGGCSSCT----------------TS
T ss_pred             CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc-----cCEEEEcccCCCCC----------------CC
Confidence            3579999999999999 99999999999998888888888752     12344444321110                12


Q ss_pred             hhhHHHHHHHHhh-------CCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQG-------MNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~-------~g~~V~miGDG~ND~~ai  268 (270)
                      |+--..+.+.+.-       ...-|+++||+.||+.|+
T Consensus       173 ~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a  210 (275)
T 2qlt_A          173 PEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAG  210 (275)
T ss_dssp             SHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHH
T ss_pred             hHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHH
Confidence            2222333344432       334599999999998775

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=96.65  E-value=0.0035  Score=51.38  Aligned_cols=86  Identities=9%  Similarity=-0.019  Sum_probs=57.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|+ .|+++.++|+.....+..+.+.+|+...-    ..++++.....                  ..|
T Consensus       107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~------------------~kp  163 (240)
T 3qnm_A          107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF----KKIILSEDLGV------------------LKP  163 (240)
T ss_dssp             CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC----SEEEEGGGTTC------------------CTT
T ss_pred             CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc----eeEEEeccCCC------------------CCC
Confidence            56899999999999 99999999999988888888888875321    12333322211                  011


Q ss_pred             hhHHHHHHHHhhCC---CEEEEECCcH-hhhhhh
Q psy885          239 AHKSKIVEFLQGMN---EISAMDSSTG-KTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g---~~V~miGDG~-ND~~ai  268 (270)
                       ....+-..++..|   .-|+|+||+. ||+.|.
T Consensus       164 -~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a  196 (240)
T 3qnm_A          164 -RPEIFHFALSATQSELRESLMIGDSWEADITGA  196 (240)
T ss_dssp             -SHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHH
T ss_pred             -CHHHHHHHHHHcCCCcccEEEECCCchHhHHHH
Confidence             1122223334433   5799999996 998765

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=96.64  E-value=0.0041  Score=50.98  Aligned_cols=35  Identities=11%  Similarity=0.109  Sum_probs=30.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAIC  193 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA  193 (270)
                      ++.+++.++++.|++.|+++.++||-....+..++
T Consensus        36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~   70 (196)
T 2oda_A           36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA   70 (196)
T ss_dssp             SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence            56899999999999999999999999887775544

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=96.56  E-value=0.0019  Score=54.00  Aligned_cols=34  Identities=18%  Similarity=0.124  Sum_probs=29.5

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEA  191 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~  191 (270)
                      -++.+++.++++.|++.|+++.++|+........
T Consensus       111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~  144 (250)
T 3l5k_A          111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDM  144 (250)
T ss_dssp             CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHH
Confidence            4678999999999999999999999998665543

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=96.54  E-value=0.011  Score=48.48  Aligned_cols=86  Identities=12%  Similarity=0.073  Sum_probs=58.4

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      -++.+++.++++.|++. +++.++|+.....+..+.+.+|+..--    ..++++.....                  ..
T Consensus       102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~------------------~k  158 (238)
T 3ed5_A          102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF----KDIFVSEDTGF------------------QK  158 (238)
T ss_dssp             CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC----SEEEEGGGTTS------------------CT
T ss_pred             CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh----heEEEecccCC------------------CC
Confidence            35789999999999999 999999999998888888888876321    12333322211                  01


Q ss_pred             hhhHHHHH-HHHhhCC----CEEEEECCcH-hhhhhh
Q psy885          238 PAHKSKIV-EFLQGMN----EISAMDSSTG-KTELRI  268 (270)
Q Consensus       238 P~~K~~iV-~~lq~~g----~~V~miGDG~-ND~~ai  268 (270)
                      |  |..++ ..++..|    .-|+|+||+. ||+.|.
T Consensus       159 p--~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a  193 (238)
T 3ed5_A          159 P--MKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGG  193 (238)
T ss_dssp             T--CHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHH
T ss_pred             C--ChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHH
Confidence            1  12222 3334444    4699999998 998765

>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*

Probab=96.50  E-value=0.004  Score=49.58  Aligned_cols=78  Identities=9%  Similarity=0.076  Sum_probs=55.2

Q ss_pred             eeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeecccccce
Q psy885           45 TLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKVSAIV  124 (270)
Q Consensus        45 ~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~~~~a~~  124 (270)
                      ..||++..++..|.+  +         ...+.+|+++.|..++...... ....+.+.....+.+|.+++.+     |. 
T Consensus        79 ~~~F~a~~G~~Gv~v--~---------G~~v~vGn~~~i~~l~~~~gi~-~~~~~~~~~~~la~~G~T~v~V-----A~-  140 (156)
T 1svj_A           79 FVPFTAQSRMSGINI--D---------NRMIRKGSVDAIRRHVEANGGH-FPTDVDQKVDQVARQGATPLVV-----VE-  140 (156)
T ss_dssp             EEEEETTTTEEEEEE--T---------TEEEEEEEHHHHHHHHHHHTCC-CCHHHHHHHHHHHHTTCEEEEE-----EE-
T ss_pred             eeeccccCCCCeEEE--C---------CEEEEEeCcHHHHHHHHHcCCC-CcHHHHHHHHHHHhCCCCEEEE-----EE-
Confidence            368999988777754  1         2456799999888877542110 0112455566678999999999     52 


Q ss_pred             eCCCCcccccccccchhhcccCCeEEEEEEeecCCCch
Q psy885          125 PWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRK  162 (270)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr~  162 (270)
                                            +..++|+|++.|++|+
T Consensus       141 ----------------------d~~l~GvIalaD~iK~  156 (156)
T 1svj_A          141 ----------------------GSRVLGVIALKDIVKG  156 (156)
T ss_dssp             ----------------------TTEEEEEEEEEECCCC
T ss_pred             ----------------------CCEEEEEEEEecCCCC
Confidence                                  3568999999999996

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=96.45  E-value=0.0087  Score=48.93  Aligned_cols=89  Identities=13%  Similarity=-0.002  Sum_probs=59.7

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++. +++.++|+.....+..+.+.+|+...-    ..++++.....                ..-.|
T Consensus       100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f----~~~~~~~~~~~----------------~kp~~  158 (234)
T 3u26_A          100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF----DSITTSEEAGF----------------FKPHP  158 (234)
T ss_dssp             CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEHHHHTB----------------CTTSH
T ss_pred             CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc----ceeEeccccCC----------------CCcCH
Confidence            5679999999999999 999999999999888888888885321    12333222110                01122


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcH-hhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTG-KTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~-ND~~ai  268 (270)
                      +--..+.+.+.-...-|+|+||+. ||+.|.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a  189 (234)
T 3u26_A          159 RIFELALKKAGVKGEEAVYVGDNPVKDCGGS  189 (234)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCTTTTHHHH
T ss_pred             HHHHHHHHHcCCCchhEEEEcCCcHHHHHHH
Confidence            222334444433345699999997 998775

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=96.41  E-value=0.0062  Score=55.53  Aligned_cols=42  Identities=19%  Similarity=0.267  Sum_probs=38.7

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      ++.|++.++++.|+++|+++.++|+-....+..+.+.+|+..
T Consensus       215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~  256 (384)
T 1qyi_A          215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP  256 (384)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred             CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence            678999999999999999999999999999988888999863

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=96.39  E-value=0.00055  Score=55.37  Aligned_cols=90  Identities=12%  Similarity=0.106  Sum_probs=51.3

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR-IGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~-~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      ++.+++.++++.|++.|+++.++|+........+... .|+...    ...++++.+...                ..-.
T Consensus        91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~----f~~~~~~~~~~~----------------~Kp~  150 (206)
T 2b0c_A           91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA----ADHIYLSQDLGM----------------RKPE  150 (206)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH----CSEEEEHHHHTC----------------CTTC
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh----eeeEEEecccCC----------------CCCC
Confidence            5689999999999999999999998654433222222 222100    011222221100                0112


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      |+--..+++.+.-...-++|+||+.||+.|.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a  181 (206)
T 2b0c_A          151 ARIYQHVLQAEGFSPSDTVFFDDNADNIEGA  181 (206)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHeEEeCCCHHHHHHH
Confidence            3333344444443445689999999997664

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=96.33  E-value=0.0082  Score=50.86  Aligned_cols=89  Identities=13%  Similarity=0.116  Sum_probs=58.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++.|+++.++|+.... ...+.+.+|+...-    ..++++.+...                ..-.|
T Consensus       106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f----~~~~~~~~~~~----------------~Kp~~  164 (263)
T 3k1z_A          106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF----DFVLTSEAAGW----------------PKPDP  164 (263)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC----SCEEEHHHHSS----------------CTTSH
T ss_pred             eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh----hEEEeecccCC----------------CCCCH
Confidence            36799999999999999999999987654 56777888875321    12333332211                11233


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcH-hhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTG-KTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~-ND~~ai  268 (270)
                      +--..+.+.+.-...-++|+||+. ||+.|.
T Consensus       165 ~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a  195 (263)
T 3k1z_A          165 RIFQEALRLAHMEPVVAAHVGDNYLCDYQGP  195 (263)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCHHHHTHHH
T ss_pred             HHHHHHHHHcCCCHHHEEEECCCcHHHHHHH
Confidence            333444454543446799999997 997764

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=96.26  E-value=0.0078  Score=51.19  Aligned_cols=88  Identities=11%  Similarity=0.068  Sum_probs=58.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++ ++++.++|+.....+..+.+.+|+..--    ..++++.+...                ..-.|
T Consensus       121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~~----------------~KP~p  179 (260)
T 2gfh_A          121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF----DAIVIGGEQKE----------------EKPAP  179 (260)
T ss_dssp             CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC----SEEEEGGGSSS----------------CTTCH
T ss_pred             CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh----heEEecCCCCC----------------CCCCH
Confidence            678999999999998 6999999999999888888899986321    12333332211                11123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECC-cHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSS-TGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGD-G~ND~~a  267 (270)
                      +-=..+.+.+.-...-++|||| ..||+.+
T Consensus       180 ~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~  209 (260)
T 2gfh_A          180 SIFYHCCDLLGVQPGDCVMVGDTLETDIQG  209 (260)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCTTTHHHH
T ss_pred             HHHHHHHHHcCCChhhEEEECCCchhhHHH
Confidence            3323333444333456899999 4999754

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=96.19  E-value=0.011  Score=48.78  Aligned_cols=84  Identities=7%  Similarity=0.038  Sum_probs=56.7

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++. +++.++|+........+.+.+|+.-      ..++++..+..                  ..|
T Consensus       116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f------~~~~~~~~~~~------------------~kp  170 (254)
T 3umg_A          116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW------DVIIGSDINRK------------------YKP  170 (254)
T ss_dssp             CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC------SCCCCHHHHTC------------------CTT
T ss_pred             cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe------eEEEEcCcCCC------------------CCC
Confidence            5679999999999997 9999999999999989889998841      11222222111                  112


Q ss_pred             hhHHHHHHHHhhCC---CEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMN---EISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g---~~V~miGDG~ND~~ai  268 (270)
                      . ...+-..++..|   .-|+|+||+.||+.|.
T Consensus       171 ~-~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a  202 (254)
T 3umg_A          171 D-PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAA  202 (254)
T ss_dssp             S-HHHHHHHHHHTTCCGGGEEEEESCHHHHHHH
T ss_pred             C-HHHHHHHHHHcCCChHHEEEEeCChHhHHHH
Confidence            1 112223334433   5689999999998775

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=96.05  E-value=0.0034  Score=50.41  Aligned_cols=41  Identities=20%  Similarity=0.263  Sum_probs=35.3

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGD---------------NKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD---------------~~~ta~~iA~~~gi~  199 (270)
                      ++.|++.++|+.|++.|+++.++|+-               ....+..+.+.+|+.
T Consensus        42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~   97 (176)
T 2fpr_A           42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ   97 (176)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred             cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence            57899999999999999999999997               456677778888874

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=96.01  E-value=0.014  Score=50.61  Aligned_cols=89  Identities=15%  Similarity=0.083  Sum_probs=59.2

Q ss_pred             ecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHH--------hCCCCCCCCccceeeechhhcCCCHHHHH
Q psy885          156 MLDPPRKEVFDSIARCRAAGIRVIVITGDNKATA---EAICRR--------IGVFTEEEDTTGKSYSGREFDDLPLSEQK  224 (270)
Q Consensus       156 ~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta---~~iA~~--------~gi~~~~~~~~~~~i~G~~~~~l~~~~~~  224 (270)
                      ...++.+++.++++.|++.|+++.++||-....+   ..+-+.        .|+. -    . .++.+.+..        
T Consensus       185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~-~----~-~~~~~~~~~--------  250 (301)
T 1ltq_A          185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP-L----V-MQCQREQGD--------  250 (301)
T ss_dssp             GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC-C----S-EEEECCTTC--------
T ss_pred             cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC-c----h-heeeccCCC--------
Confidence            4678899999999999999999999999764332   222333        5772 1    1 122222110        


Q ss_pred             HhccCceEEEecChhhHHHHHHHHhhCC-CEEEEECCcHhhhhh
Q psy885          225 AAVARARLFSRVEPAHKSKIVEFLQGMN-EISAMDSSTGKTELR  267 (270)
Q Consensus       225 ~~~~~~~v~ar~tP~~K~~iV~~lq~~g-~~V~miGDG~ND~~a  267 (270)
                               .+-.|+-+..+.+.+.... ..++|+||..+|+.|
T Consensus       251 ---------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~  285 (301)
T 1ltq_A          251 ---------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEM  285 (301)
T ss_dssp             ---------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHH
T ss_pred             ---------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHH
Confidence                     1234777788878775443 346899999999865

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=95.97  E-value=0.015  Score=48.21  Aligned_cols=87  Identities=10%  Similarity=0.082  Sum_probs=56.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++. +++.++|+........+.+.+|+.-      ..++++.....                ..-.|
T Consensus       120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f------~~~~~~~~~~~----------------~kp~~  176 (254)
T 3umc_A          120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW------DMLLCADLFGH----------------YKPDP  176 (254)
T ss_dssp             EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC------SEECCHHHHTC----------------CTTSH
T ss_pred             CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc------ceEEeeccccc----------------CCCCH
Confidence            4578999999999985 9999999999988888888888841      12222222110                01122


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      .-=..+.+.+.-...-|+|+||+.||+.|.
T Consensus       177 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a  206 (254)
T 3umc_A          177 QVYLGACRLLDLPPQEVMLCAAHNYDLKAA  206 (254)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHcCCChHHEEEEcCchHhHHHH
Confidence            222233333332335699999999998775

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=95.95  E-value=0.0088  Score=53.35  Aligned_cols=112  Identities=12%  Similarity=0.012  Sum_probs=67.9

Q ss_pred             ecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh----CCCCCCCCccce--eeechhhcC-CCH-HHHHH--
Q psy885          156 MLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI----GVFTEEEDTTGK--SYSGREFDD-LPL-SEQKA--  225 (270)
Q Consensus       156 ~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~----gi~~~~~~~~~~--~i~G~~~~~-l~~-~~~~~--  225 (270)
                      ....+.+++.++++.|++.|++|+||||-....+..+|..+    ||.+..  +.+.  .+....... +.. .+...  
T Consensus       140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~--ViG~~~~~~~~~~~~~~~~~~~~~dg~  217 (327)
T 4as2_A          140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPEN--VIGVTTLLKNRKTGELTTARKQIAEGK  217 (327)
T ss_dssp             CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGG--EEEECEEEECTTTCCEECHHHHHHTTC
T ss_pred             cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHH--eEeeeeeeecccccccccccccccccc
Confidence            34457899999999999999999999999999999999874    565332  1111  111110000 000 00000  


Q ss_pred             ----hccCceEEEe-----cChhhHHHHHHHHhhCC-CEEEEECCcH-hhhhhhc
Q psy885          226 ----AVARARLFSR-----VEPAHKSKIVEFLQGMN-EISAMDSSTG-KTELRIF  269 (270)
Q Consensus       226 ----~~~~~~v~ar-----~tP~~K~~iV~~lq~~g-~~V~miGDG~-ND~~ai~  269 (270)
                          ......+..+     +--+-|..-|+.+...| ..+++.||+. .|..||+
T Consensus       218 y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~  272 (327)
T 4as2_A          218 YDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLF  272 (327)
T ss_dssp             CCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHH
T ss_pred             ccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHh
Confidence                0011122222     22367888777765443 4688999995 7999984

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=95.94  E-value=0.0049  Score=50.63  Aligned_cols=40  Identities=3%  Similarity=0.194  Sum_probs=34.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ++.|++.++++.|++.|+++.++|+... .+..+.+.+|+.
T Consensus        95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~  134 (220)
T 2zg6_A           95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK  134 (220)
T ss_dssp             EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence            4679999999999999999999998765 467777888875

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=95.88  E-value=0.016  Score=47.16  Aligned_cols=90  Identities=8%  Similarity=0.006  Sum_probs=54.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.+.++.|+.   ++.++|+........+.+.+|+...-   ...++++.....-            .  ..-.|
T Consensus        87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~---~~~~~~~~~~~~~------------~--~kpk~  146 (229)
T 2fdr_A           87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF---APHIYSAKDLGAD------------R--VKPKP  146 (229)
T ss_dssp             CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT---TTCEEEHHHHCTT------------C--CTTSS
T ss_pred             ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhc---cceEEeccccccC------------C--CCcCH
Confidence            567888888887764   99999999998888888888875321   0122333221100            0  00112


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      .--..+++.+.-...-|+++||+.||+.|.
T Consensus       147 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a  176 (229)
T 2fdr_A          147 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGA  176 (229)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHeEEEcCCHHHHHHH
Confidence            222333344433345689999999998775

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=95.84  E-value=0.021  Score=48.70  Aligned_cols=88  Identities=10%  Similarity=0.157  Sum_probs=55.6

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh---CCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI---GVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~---gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      -++.|++.++++.|++.|+++.++|.-....+..+-+.+   |+..--    ..++++ ++.                 .
T Consensus       129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f----d~i~~~-~~~-----------------~  186 (261)
T 1yns_A          129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV----DGHFDT-KIG-----------------H  186 (261)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC----SEEECG-GGC-----------------C
T ss_pred             cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc----cEEEec-CCC-----------------C
Confidence            468999999999999999999999999888777665543   353211    112222 211                 1


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      .-.|+-=..+.+.+.-...-++||||..+|+.|
T Consensus       187 KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~a  219 (261)
T 1yns_A          187 KVESESYRKIADSIGCSTNNILFLTDVTREASA  219 (261)
T ss_dssp             TTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHH
T ss_pred             CCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHH
Confidence            112222233344443334568999999999754

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=95.79  E-value=0.028  Score=47.83  Aligned_cols=42  Identities=17%  Similarity=0.299  Sum_probs=37.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      .+-+.+.++|+.+++.|+++++.||=....+..+.+.+|+..
T Consensus        22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   63 (279)
T 3mpo_A           22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDG   63 (279)
T ss_dssp             --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence            467889999999999999999999999999999999999753

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=95.78  E-value=0.016  Score=47.73  Aligned_cols=89  Identities=13%  Similarity=0.075  Sum_probs=55.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------hCCCCCCCCccceeeechhhcCCCHHHHHHhccCceE
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR------IGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARL  232 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~------~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v  232 (270)
                      ++.|++.++++.|++. +++.++|+.....+..+.+.      .|+...-    ..++++.+..                
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f----d~i~~~~~~~----------------  170 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF----EKTYLSYEMK----------------  170 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC----SEEEEHHHHT----------------
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC----CEEEeecccC----------------
Confidence            4679999999999998 99999999998888766633      3442110    1122222211                


Q ss_pred             EEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          233 FSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       233 ~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      ...-.|+-=..+++.+.-...-|+|+||+.||+.|.
T Consensus       171 ~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a  206 (229)
T 4dcc_A          171 MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVA  206 (229)
T ss_dssp             CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHH
Confidence            011123333344444443446799999999998764

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=95.73  E-value=0.019  Score=46.80  Aligned_cols=87  Identities=6%  Similarity=0.167  Sum_probs=56.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++ |+++.++|+........+.+.++-.      ...++++.++...                .-.|
T Consensus        99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~------fd~i~~~~~~~~~----------------KP~~  155 (240)
T 3smv_A           99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE------FDHIITAQDVGSY----------------KPNP  155 (240)
T ss_dssp             CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC------CSEEEEHHHHTSC----------------TTSH
T ss_pred             CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc------cCEEEEccccCCC----------------CCCH
Confidence            678999999999999 8999999998887777665543311      1233443332211                1234


Q ss_pred             hhHHHHHHHHhhC---CCEEEEECCcH-hhhhhh
Q psy885          239 AHKSKIVEFLQGM---NEISAMDSSTG-KTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~---g~~V~miGDG~-ND~~ai  268 (270)
                      +-....++.++..   ..-++|+||+. ||+.|.
T Consensus       156 ~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a  189 (240)
T 3smv_A          156 NNFTYMIDALAKAGIEKKDILHTAESLYHDHIPA  189 (240)
T ss_dssp             HHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHH
T ss_pred             HHHHHHHHHHHhcCCCchhEEEECCCchhhhHHH
Confidence            4333443334443   35699999996 998764

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=95.57  E-value=0.031  Score=46.16  Aligned_cols=41  Identities=10%  Similarity=0.219  Sum_probs=36.6

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      -++.|++.++++.|++.| ++.++|+-....+..+.+.+|+.
T Consensus        95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~  135 (231)
T 2p11_A           95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLW  135 (231)
T ss_dssp             GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHH
T ss_pred             CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcH
Confidence            468899999999999999 99999998888888888888874

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=95.23  E-value=0.021  Score=49.01  Aligned_cols=95  Identities=18%  Similarity=0.137  Sum_probs=56.1

Q ss_pred             CCchhHHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHhCCCCCCCCccceeeechhhc
Q psy885          159 PPRKEVFDSIARCRAA-GIRVIVITGD---------------------NKATAEAICRRIGVFTEEEDTTGKSYSGREFD  216 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~a-gi~v~mlTGD---------------------~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~  216 (270)
                      .+++++.++++.|++. |+++.+.|..                     ....+..+.+..|+...       +.....+.
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-------~~~~~~~~  194 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN-------INRCNPLA  194 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE-------EEECCGGG
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE-------EEEccccc
Confidence            5788999999999988 9999888866                     33444445555555310       00000000


Q ss_pred             CCCHHHHHHhccCceEEEecCh--hhHHHHHHHHhhC-C---CEEEEECCcHhhhhhhc
Q psy885          217 DLPLSEQKAAVARARLFSRVEP--AHKSKIVEFLQGM-N---EISAMDSSTGKTELRIF  269 (270)
Q Consensus       217 ~l~~~~~~~~~~~~~v~ar~tP--~~K~~iV~~lq~~-g---~~V~miGDG~ND~~ai~  269 (270)
                      .-         .....+....|  ..|...++.+.+. |   ..++|+||+.||..|+.
T Consensus       195 ~~---------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~  244 (289)
T 3gyg_A          195 GD---------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQ  244 (289)
T ss_dssp             TC---------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHT
T ss_pred             cC---------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHH
Confidence            00         00013333333  3566777665442 3   45999999999998863

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=94.47  E-value=0.12  Score=43.21  Aligned_cols=88  Identities=6%  Similarity=-0.051  Sum_probs=55.8

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      .++.|++.++++.|++.|+++.+.|+-.  .+..+-+.+|+...-    ..++++.+...-                .-.
T Consensus       115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F----d~i~~~~~~~~~----------------KP~  172 (250)
T 4gib_A          115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF----DFIADAGKCKNN----------------KPH  172 (250)
T ss_dssp             GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC----SEECCGGGCCSC----------------TTS
T ss_pred             cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc----ceeecccccCCC----------------CCc
Confidence            4578999999999999999999877643  355667788886432    234444443221                123


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      |+-=..+++.+.-...-++||||..+|+.|
T Consensus       173 p~~~~~a~~~lg~~p~e~l~VGDs~~Di~a  202 (250)
T 4gib_A          173 PEIFLMSAKGLNVNPQNCIGIEDASAGIDA  202 (250)
T ss_dssp             SHHHHHHHHHHTCCGGGEEEEESSHHHHHH
T ss_pred             HHHHHHHHHHhCCChHHeEEECCCHHHHHH
Confidence            333333444443334568899999998654

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=94.39  E-value=0.14  Score=43.10  Aligned_cols=36  Identities=22%  Similarity=0.407  Sum_probs=31.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV  198 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi  198 (270)
                      .+.+.+.++|+.|++.|+++++.||-......    .+|+
T Consensus        16 ~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~----~l~~   51 (259)
T 3zx4_A           16 GELGPAREALERLRALGVPVVPVTAKTRKEVE----ALGL   51 (259)
T ss_dssp             SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH----HTTC
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH----HcCC
Confidence            46678899999999999999999999987766    6775

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=93.98  E-value=0.17  Score=42.11  Aligned_cols=40  Identities=18%  Similarity=0.061  Sum_probs=32.3

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      ++.|++.++++.|++.|+++.++|....  +..+-+.+|+..
T Consensus        95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~  134 (243)
T 4g9b_A           95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE  134 (243)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred             cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence            5689999999999999999999997543  344566788764

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=93.92  E-value=0.011  Score=48.98  Aligned_cols=28  Identities=18%  Similarity=0.264  Sum_probs=24.6

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHH
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKA  187 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~  187 (270)
                      +.+++.++++.|++.|+++.++|+-...
T Consensus        89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~  116 (211)
T 2b82_A           89 PKEVARQLIDMHVRRGDAIFFVTGRSPT  116 (211)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence            4679999999999999999999997643

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=93.04  E-value=0.097  Score=42.43  Aligned_cols=84  Identities=13%  Similarity=0.048  Sum_probs=48.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.++++.|++. +++.++|+....     .+.+|+...-    ..++++.....                ..-.|
T Consensus       105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f----~~~~~~~~~~~----------------~kp~~  158 (230)
T 3vay_A          105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF----AFALCAEDLGI----------------GKPDP  158 (230)
T ss_dssp             CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC----SEEEEHHHHTC----------------CTTSH
T ss_pred             ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe----eeeEEccccCC----------------CCcCH
Confidence            4779999999999998 999999987643     2334443211    11222221110                01122


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcH-hhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTG-KTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~-ND~~ai  268 (270)
                      +-=..+.+.+.-...-++|+||+. ||+.|.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a  189 (230)
T 3vay_A          159 APFLEALRRAKVDASAAVHVGDHPSDDIAGA  189 (230)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCTTTTHHHH
T ss_pred             HHHHHHHHHhCCCchheEEEeCChHHHHHHH
Confidence            222333444433345699999998 998764

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=92.88  E-value=0.16  Score=46.47  Aligned_cols=40  Identities=23%  Similarity=0.375  Sum_probs=33.0

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHhCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDN------------KATAEAICRRIGVF  199 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~------------~~ta~~iA~~~gi~  199 (270)
                      +-+++.++|+.|+++|+++.++|+-.            ...+..+.+.+|+.
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~  139 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP  139 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999954            22266777888874

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=92.86  E-value=0.39  Score=40.46  Aligned_cols=25  Identities=16%  Similarity=0.230  Sum_probs=21.5

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGD  184 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD  184 (270)
                      .++.+.++++.+++.++.+.+.|++
T Consensus        91 ~~~~~~~i~~~~~~~~~~~~~~~~~  115 (279)
T 4dw8_A           91 PNEVVPVLYECARTNHLSILTYDGA  115 (279)
T ss_dssp             CGGGHHHHHHHHHHTTCEEEEEETT
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEECC
Confidence            4567999999999999999888876

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=92.24  E-value=0.36  Score=44.08  Aligned_cols=26  Identities=12%  Similarity=0.245  Sum_probs=24.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGD  184 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD  184 (270)
                      ++.+++.++++.|++.|+++.++|+-
T Consensus       100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~  125 (555)
T 3i28_A          100 KINRPMLQAALMLRKKGFTTAILTNT  125 (555)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence            57899999999999999999999985

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=91.76  E-value=0.037  Score=44.77  Aligned_cols=40  Identities=13%  Similarity=0.177  Sum_probs=37.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+||++.+.++.|.+. +++++.|.-....|..+...++..
T Consensus        55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~   94 (181)
T 2ght_A           55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW   94 (181)
T ss_dssp             EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred             EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence            5799999999999998 999999999999999999999875

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=91.06  E-value=0.044  Score=45.00  Aligned_cols=40  Identities=13%  Similarity=0.173  Sum_probs=37.7

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+||++.+.++.|++. +++++.|.-....|..+...+++.
T Consensus        68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~  107 (195)
T 2hhl_A           68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW  107 (195)
T ss_dssp             EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred             EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence            5799999999999998 999999999999999999999875

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=89.85  E-value=0.56  Score=39.72  Aligned_cols=35  Identities=17%  Similarity=0.279  Sum_probs=29.2

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI  196 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~  196 (270)
                      -++.|++.++++.    |+++.++|......+..+-+.+
T Consensus       124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~  158 (253)
T 2g80_A          124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYV  158 (253)
T ss_dssp             BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSB
T ss_pred             CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhh
Confidence            4678999888877    9999999999988877766655

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=88.93  E-value=0.28  Score=40.96  Aligned_cols=28  Identities=11%  Similarity=0.177  Sum_probs=24.7

Q ss_pred             hHHHHHHHHhhC-CCEEEEECCcHhhhhhhc
Q psy885          240 HKSKIVEFLQGM-NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       240 ~K~~iV~~lq~~-g~~V~miGDG~ND~~ai~  269 (270)
                      .|..-++.|.+. |  |+++||+.||..||-
T Consensus       160 ~Kg~al~~l~~~~g--via~GD~~ND~~Ml~  188 (239)
T 1u02_A          160 NKGSAIRSVRGERP--AIIAGDDATDEAAFE  188 (239)
T ss_dssp             CHHHHHHHHHTTSC--EEEEESSHHHHHHHH
T ss_pred             CHHHHHHHHHhhCC--eEEEeCCCccHHHHH
Confidence            799999998775 5  999999999999974

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=88.63  E-value=1.3  Score=37.55  Aligned_cols=42  Identities=24%  Similarity=0.302  Sum_probs=37.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      .+-+.+.++|++|++.|++++++||=....+..+.+++++..
T Consensus        22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~   63 (282)
T 1rkq_A           22 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ   63 (282)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence            467889999999999999999999999999999999998753

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=88.58  E-value=3.7  Score=34.46  Aligned_cols=88  Identities=18%  Similarity=0.203  Sum_probs=60.0

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE-ecC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS-RVE  237 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a-r~t  237 (270)
                      .+-+.+.++|+.+++.|+.+++.||=....+..+.+.+|+...     ....+|..+.....        + .++. ...
T Consensus        23 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~-----~i~~nGa~i~~~~~--------~-~~~~~~l~   88 (290)
T 3dnp_A           23 KIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAK-----LITHSGAYIAEKID--------A-PFFEKRIS   88 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSC-----EEEGGGTEEESSTT--------S-CSEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCe-----EEEcCCeEEEcCCC--------C-EEEecCCC
Confidence            4678899999999999999999999999999999999987521     12223333211100        0 2222 245


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECC
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSS  260 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGD  260 (270)
                      ++.-.++++.+++.+..+.+.++
T Consensus        89 ~~~~~~i~~~~~~~~~~~~~~~~  111 (290)
T 3dnp_A           89 DDHTFNIVQVLESYQCNIRLLHE  111 (290)
T ss_dssp             HHHHHHHHHHHHTSSCEEEEECS
T ss_pred             HHHHHHHHHHHHHcCceEEEEEC
Confidence            66667788888887766665544

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=88.11  E-value=1.7  Score=35.99  Aligned_cols=41  Identities=17%  Similarity=0.328  Sum_probs=36.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+.+.+.++|+.+++.|+++++.||-....+..+.+++++.
T Consensus        20 ~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~   60 (258)
T 2pq0_A           20 QLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGID   60 (258)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCC
Confidence            46788999999999999999999999998888888888764

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=87.97  E-value=1.7  Score=35.67  Aligned_cols=30  Identities=10%  Similarity=-0.083  Sum_probs=22.7

Q ss_pred             hhHHHHHHHHhhC-C---CEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGM-N---EISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~-g---~~V~miGDG~ND~~ai  268 (270)
                      ..|...++.+.+. |   ..|+|+||+.||..|+
T Consensus       152 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~  185 (231)
T 1wr8_A          152 INKGSGIEKASEFLGIKPKEVAHVGDGENDLDAF  185 (231)
T ss_dssp             CCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHH
T ss_pred             CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence            3677777776542 3   4689999999999886

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=86.64  E-value=1.1  Score=36.83  Aligned_cols=41  Identities=27%  Similarity=0.421  Sum_probs=37.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+.+.+.++|+.|++.|++++++||-....+..+.+.+|+.
T Consensus        20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~   60 (231)
T 1wr8_A           20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS   60 (231)
T ss_dssp             CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC
Confidence            46788999999999999999999999999999999999874

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=86.25  E-value=3.8  Score=34.26  Aligned_cols=40  Identities=8%  Similarity=-0.017  Sum_probs=36.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+-+.+.++|++ ++.|+++++.||=....+..+.+.+|+.
T Consensus        19 ~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~   58 (268)
T 1nf2_A           19 EISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKR   58 (268)
T ss_dssp             CCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSS
T ss_pred             ccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCC
Confidence            466788999999 9999999999999999999999999975

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=86.24  E-value=1  Score=34.82  Aligned_cols=40  Identities=15%  Similarity=0.136  Sum_probs=33.0

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDN---KATAEAICRRIGVF  199 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~---~~ta~~iA~~~gi~  199 (270)
                      +-+++.++|+.|++.|++++++||=.   ...+...+.+.|+.
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~   67 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE   67 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence            34689999999999999999999976   55566667777874

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=85.42  E-value=5  Score=33.41  Aligned_cols=89  Identities=11%  Similarity=0.121  Sum_probs=57.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEe-cC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSR-VE  237 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar-~t  237 (270)
                      .+-+.+.++|+.+++.|+++++.||-....+..+.+.+|+......  ....+|..+....        ..-.++.. ..
T Consensus        22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~--~i~~nGa~i~~~~--------~~~~~~~~~l~   91 (279)
T 4dw8_A           22 EISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGF--ILSYNGGEIINWE--------SKEMMYENVLP   91 (279)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCE--EEEGGGTEEEETT--------TCCEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCE--EEEeCCeEEEECC--------CCeEEEEecCC
Confidence            4678999999999999999999999999999999999997421111  1122333221110        00123332 45


Q ss_pred             hhhHHHHHHHHhhCCCEEEE
Q psy885          238 PAHKSKIVEFLQGMNEISAM  257 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~m  257 (270)
                      ++.-.++++.+++.+..+..
T Consensus        92 ~~~~~~i~~~~~~~~~~~~~  111 (279)
T 4dw8_A           92 NEVVPVLYECARTNHLSILT  111 (279)
T ss_dssp             GGGHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHcCCEEEE
Confidence            56667777878777655444

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=85.19  E-value=0.59  Score=39.09  Aligned_cols=42  Identities=14%  Similarity=0.274  Sum_probs=34.2

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITG---DNKATAEAICRRIGVF  199 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTG---D~~~ta~~iA~~~gi~  199 (270)
                      +.+-+++.++|+.|++.|++++++||   -.........+.+|+.
T Consensus        23 ~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~   67 (268)
T 3qgm_A           23 VTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE   67 (268)
T ss_dssp             TEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred             CEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence            33557899999999999999999999   5666666666788875

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=85.11  E-value=0.83  Score=40.81  Aligned_cols=92  Identities=14%  Similarity=0.157  Sum_probs=56.7

Q ss_pred             EeecCCCchhHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCCCCccceeeec-hhhcCCCHHHHHHhcc
Q psy885          154 VGMLDPPRKEVFDSIARCRAAGIRVIVITGDN----KATAEAICRRIGVFTEEEDTTGKSYSG-REFDDLPLSEQKAAVA  228 (270)
Q Consensus       154 i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~----~~ta~~iA~~~gi~~~~~~~~~~~i~G-~~~~~l~~~~~~~~~~  228 (270)
                      +.-.+.+-+++.++|+.|++.|++++++|.-.    ...+..+++.+|+....+    .+++. .....+..       .
T Consensus        24 l~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~----~i~ts~~~~~~~~~-------~   92 (352)
T 3kc2_A           24 LFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPL----QIIQSHTPYKSLVN-------K   92 (352)
T ss_dssp             TEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGG----GEECTTGGGGGGTT-------T
T ss_pred             eEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChh----hEeehHHHHHHHHh-------c
Confidence            33345566899999999999999999999865    455666666789864322    23333 22222211       1


Q ss_pred             CceEEEecChhhHHHHHHHHhhCCCEEEEECC
Q psy885          229 RARLFSRVEPAHKSKIVEFLQGMNEISAMDSS  260 (270)
Q Consensus       229 ~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGD  260 (270)
                      ...||.=-++    .+.+.+++.|..+..+|.
T Consensus        93 ~~~v~viG~~----~l~~~l~~~G~~~v~~~~  120 (352)
T 3kc2_A           93 YSRILAVGTP----SVRGVAEGYGFQDVVHQT  120 (352)
T ss_dssp             CSEEEEESST----THHHHHHHHTCSEEEEHH
T ss_pred             CCEEEEECCH----HHHHHHHhCCCeEecchh
Confidence            2245554444    456667777876665553

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=84.70  E-value=4.7  Score=34.03  Aligned_cols=86  Identities=19%  Similarity=0.190  Sum_probs=57.7

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEe-cC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSR-VE  237 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar-~t  237 (270)
                      .+.+.+.++|+.|++.|++++++||=....+..+.+.+|+..+     -...+|..+....         .-.++.. +.
T Consensus        21 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~-----~I~~NGa~i~~~~---------~~~~~~~~~~   86 (288)
T 1nrw_A           21 QVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTW-----VISANGAVIHDPE---------GRLYHHETID   86 (288)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCE-----EEEGGGTEEECTT---------CCEEEECCCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc-----EEEcCCeEEEcCC---------CcEEEEeeCC
Confidence            3567889999999999999999999999999888888876421     1233444332211         0133333 45


Q ss_pred             hhhHHHHHHHHhhCCCEEEEE
Q psy885          238 PAHKSKIVEFLQGMNEISAMD  258 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~mi  258 (270)
                      ++.-.++++.+++.|..+.+.
T Consensus        87 ~~~~~~i~~~l~~~~~~~~~~  107 (288)
T 1nrw_A           87 KKRAYDILSWLESENYYYEVF  107 (288)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHHHCCcEEEEE
Confidence            566677888888877654443

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=82.67  E-value=1.7  Score=36.10  Aligned_cols=41  Identities=7%  Similarity=0.119  Sum_probs=33.6

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITG---DNKATAEAICRRIGVFT  200 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTG---D~~~ta~~iA~~~gi~~  200 (270)
                      +-+++.++|+.|++.|++++++||   -..........++|+..
T Consensus        23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~   66 (266)
T 3pdw_A           23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA   66 (266)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence            457899999999999999999988   55666666777888853

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=82.01  E-value=0.94  Score=37.79  Aligned_cols=38  Identities=16%  Similarity=0.196  Sum_probs=34.7

Q ss_pred             hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          162 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       162 ~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      +.+.++|+.|++.|++++++||=....+..+.+.+|+.
T Consensus        20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~   57 (249)
T 2zos_A           20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE   57 (249)
T ss_dssp             GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            44899999999999999999999999999999999874

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=81.58  E-value=1.4  Score=34.51  Aligned_cols=25  Identities=4%  Similarity=0.040  Sum_probs=23.0

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGD  184 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD  184 (270)
                      ++.|++.++++.|++ ++++.++|+-
T Consensus        69 ~~~pg~~e~L~~L~~-~~~~~i~T~~   93 (180)
T 3bwv_A           69 DVMPHAQEVVKQLNE-HYDIYIATAA   93 (180)
T ss_dssp             CBCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred             CCCcCHHHHHHHHHh-cCCEEEEeCC
Confidence            678999999999998 5999999986

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=81.58  E-value=0.31  Score=38.96  Aligned_cols=41  Identities=10%  Similarity=0.085  Sum_probs=35.0

Q ss_pred             CCCchhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCC
Q psy885          158 DPPRKEVFDSIARCRAA-GIRVIVITGDNKATAEAICRRIGV  198 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~a-gi~v~mlTGD~~~ta~~iA~~~gi  198 (270)
                      -++.|++.++++.|++. |+++.++|+-....+..+.+.+|+
T Consensus        72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl  113 (193)
T 2i7d_A           72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW  113 (193)
T ss_dssp             CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred             CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence            35789999999999999 999999999877777767777666

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=81.51  E-value=0.9  Score=37.92  Aligned_cols=31  Identities=13%  Similarity=-0.062  Sum_probs=24.0

Q ss_pred             hhHHHHHHHHhhC-----CCEEEEECCcHhhhhhhc
Q psy885          239 AHKSKIVEFLQGM-----NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       239 ~~K~~iV~~lq~~-----g~~V~miGDG~ND~~ai~  269 (270)
                      -.|..-++.|.+.     ..-|+++||+.||..|+.
T Consensus       178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~  213 (249)
T 2zos_A          178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFE  213 (249)
T ss_dssp             CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHT
T ss_pred             CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHH
Confidence            4688877776543     357999999999999974

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=81.49  E-value=2.2  Score=36.11  Aligned_cols=39  Identities=18%  Similarity=0.247  Sum_probs=35.3

Q ss_pred             chhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          161 RKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       161 r~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      -+.+.++|++|++.|++++++||=....+..+.+++|+.
T Consensus        28 ~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   66 (275)
T 1xvi_A           28 WQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ   66 (275)
T ss_dssp             CCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred             CHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            356789999999999999999999999999999998874

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=80.95  E-value=1.1  Score=42.40  Aligned_cols=36  Identities=14%  Similarity=0.237  Sum_probs=33.3

Q ss_pred             hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh-CC
Q psy885          162 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI-GV  198 (270)
Q Consensus       162 ~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~-gi  198 (270)
                      ++++..++.|+++| ++.+||.-+..-+..++..+ |+
T Consensus       249 p~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~  285 (555)
T 2jc9_A          249 GKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDF  285 (555)
T ss_dssp             THHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCS
T ss_pred             hHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCC
Confidence            58999999999999 99999999999999999887 75

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=80.94  E-value=1.6  Score=35.19  Aligned_cols=20  Identities=15%  Similarity=-0.079  Sum_probs=17.1

Q ss_pred             CchhHHHHHHHHHhCCCeEE
Q psy885          160 PRKEVFDSIARCRAAGIRVI  179 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~  179 (270)
                      +.+++.++++.|++.|+++.
T Consensus        88 ~~~~~~~~l~~l~~~g~~~~  107 (250)
T 2c4n_A           88 YVVGEGALIHELYKAGFTIT  107 (250)
T ss_dssp             EEECCTHHHHHHHHTTCEEC
T ss_pred             EEEcCHHHHHHHHHcCCccc
Confidence            56788899999999998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	270
d1wpga2	168	c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca	9e-26
d1wpga3	239	d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc	6e-19
d1q3ia_	214	d.220.1.1 (A:) Sodium/potassium-transporting ATPas	1e-15
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	5e-11
d2b8ea1	135	c.108.1.7 (A:416-434,A:548-663) Cation-transportin	6e-11
d1wr8a_	230	c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa	7e-04
d1l6ra_	225	c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa	0.004

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 97.5 bits (242), Expect = 9e-26
 Identities = 70/111 (63%), Positives = 84/111 (75%)

Query: 147 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTT 206
           + T       LDPPRKEV  SI  CR AGIRVI+ITGDNK TA AICRRIG+F E E+  
Sbjct: 8   DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67

Query: 207 GKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
            ++Y+GREFDDLPL+EQ+ A  RA  F+RVEP+HKSKIVE+LQ  +EI+AM
Sbjct: 68  DRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAM 118

>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Calcium ATPase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 81.1 bits (199), Expect = 6e-19
 Identities = 60/137 (43%), Positives = 80/137 (58%), Gaps = 6/137 (4%)

Query: 25  RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 84
           + E+A A    +    KKEFTLEFSRDRKSMS YC+P KSS+  + G K+FVKGAPEGV+
Sbjct: 104 KVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR-AAVGNKMFVKGAPEGVI 162

Query: 85  ERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSK-----VSAIVPWGMKPEDMNLADST 139
           +RC + R+G+ +V +           ++              A      K E+M L DS+
Sbjct: 163 DRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSS 222

Query: 140 KFASYEVNLTFVGVVGM 156
           +F  YE +LTFVGVVGM
Sbjct: 223 RFMEYETDLTFVGVVGM 239

>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Sodium/potassium-transporting ATPase alpha chain
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 71.8 bits (175), Expect = 1e-15
 Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 10/140 (7%)

Query: 27  EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 86
           E +    + +  +  K   + F+   K   S        +       L +KGAPE +L+R
Sbjct: 77  ELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIH----EREDNPQSHVLVMKGAPERILDR 132

Query: 87  CTHARIGSQKVSLKDFSANTRFENLRSLEPKS-KVSAI----VPWGMKPEDMNLADSTKF 141
           C+   +  +++ L     +        L     +V       +P G  P      D+ + 
Sbjct: 133 CSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF-DTDEL 191

Query: 142 ASYEVNLTFVGVVGMLDPPR 161
                 L FVG++ M+D   
Sbjct: 192 NFPTEKLCFVGLMSMIDHHH 211

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 59.8 bits (144), Expect = 5e-11
 Identities = 20/234 (8%), Positives = 48/234 (20%), Gaps = 37/234 (15%)

Query: 33  RQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI 92
            Q++ T     F L      + + +      +            + A   +         
Sbjct: 115 LQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIY------AALEEFATTELHVSDATLFS 168

Query: 93  GSQKVSLKDFSANTRFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVG 152
               +     +     E  +             W +  +     +              G
Sbjct: 169 LKGAL--WTLAQ----EVYQE------------WYLGSKLYEDVEKKI----ARTTFKTG 206

Query: 153 VVGMLDP--PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV---FTEEEDTTG 207
            +       P  EV   +   + AG  + + TG            +G+   F  +   T 
Sbjct: 207 YIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATA 266

Query: 208 KSYSGREFDDLPLSEQK----AAVARARLFSRVEPAHKSKIVEFLQGMNEISAM 257
                 E               +   A   +  +        +      +   +
Sbjct: 267 SDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 57.0 bits (137), Expect = 6e-11
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 146 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 196
            + T     G  D  ++    ++   +  GI+V +ITGDN  +AEAI R +
Sbjct: 8   FDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 58

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

 Score = 37.7 bits (86), Expect = 7e-04
 Identities = 17/86 (19%), Positives = 34/86 (39%)

Query: 162 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLS 221
           ++  ++I R  + GI ++++TG+    AEA    IG         G + S ++      S
Sbjct: 22  EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLAS 81

Query: 222 EQKAAVARARLFSRVEPAHKSKIVEF 247
             +  +    +  R   A  S  +  
Sbjct: 82  MDEEWILWNEIRKRFPNARTSYTMPD 107

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 35.3 bits (80), Expect = 0.004
 Identities = 7/37 (18%), Positives = 17/37 (45%)

Query: 162 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 198
            +  +SI      G+ V +++G+      A+   +G+
Sbjct: 23  TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGI 59

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	270
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	99.96
d1q3ia_	214	Sodium/potassium-transporting ATPase alpha chain {	99.93
d1wpga3	239	Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta	99.89
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	99.88
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.8
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.7
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.49
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	97.96
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	97.73
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.72
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	97.54
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	97.52
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	97.34
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	97.22
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.15
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	97.1
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.07
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	97.06
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	97.01
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	96.93
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	96.9
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	96.81
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	96.8
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	96.76
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	96.5
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	96.36
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	96.3
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	96.09
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	96.06
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	95.83
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	95.81
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	95.6
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	95.52
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	94.46
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	94.45
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	94.4
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	94.22
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	94.15
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	93.34
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	92.32
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	92.02
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	91.69
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	91.6
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	89.39
d2a29a1	136	Potassium-transporting ATPase B chain, KdpB {Esche	88.34
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	85.86
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	83.64

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=5.2e-30  Score=208.72  Aligned_cols=112  Identities=61%  Similarity=0.958  Sum_probs=108.5

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      ||||++++++|+.|+++||++||+|||+..||.++|+++||..++.......++|.++..++..++.+.+.+..+|||++
T Consensus        19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~   98 (168)
T d1wpga2          19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE   98 (168)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred             CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence            99999999999999999999999999999999999999999988877777889999999999999999999999999999


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      |+||..+|+.||+.|++|+|+|||+||++||.
T Consensus        99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~  130 (168)
T d1wpga2          99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALK  130 (168)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHH
T ss_pred             hhHHHHHHHHHHhcccceeEEecCCCCHHHHH
Confidence            99999999999999999999999999999985

>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Sodium/potassium-transporting ATPase alpha chain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.93  E-value=1.3e-26  Score=195.50  Aligned_cols=134  Identities=18%  Similarity=0.204  Sum_probs=99.1

Q ss_pred             ccCChhHHHhhhhhhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeecc
Q psy885           21 SFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLK  100 (270)
Q Consensus        21 ~~~~~~e~~~~~~~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~  100 (270)
                      +.+...+..+...+.++..|++++++||+|.+|||+++++.+.++.    .+++|+|||||+|+++|+.+..+|...+++
T Consensus        71 ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~----~~~~~~KGApe~Il~~C~~~~~~g~~~~l~  146 (214)
T d1q3ia_          71 ALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQ----SHVLVMKGAPERILDRCSSILVQGKEIPLD  146 (214)
T ss_dssp             HHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTT----SEEEEEEECHHHHHHTEEEEEETTEEEECC
T ss_pred             HHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCC----ceeEEecCCHHHHHHhhhheeeCCceeech
Confidence            3333444445557889999999999999999999999998764321    688999999999999999998899999998


Q ss_pred             HHHHH--------hhhccceEEEeecccccceeCCCCcccccc-cccchhhcccCCeEEEEEEeecCCCchh
Q psy885          101 DFSAN--------TRFENLRSLEPKSKVSAIVPWGMKPEDMNL-ADSTKFASYEVNLTFVGVVGMLDPPRKE  163 (270)
Q Consensus       101 ~~~~~--------~~~~GlRvl~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~ie~~l~~lG~i~~~d~lr~~  163 (270)
                      +..++        ++.+|+|||||     ||++++........ .+....+.++++|+|+|++++.||||++
T Consensus       147 ~~~~~~i~~~~~~~a~~GlRvLa~-----A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~  213 (214)
T d1q3ia_         147 KEMQDAFQNAYLELGGLGERVLGF-----CQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH  213 (214)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEEEEE-----EEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred             HHHHHHHHHHHHHHhhCCcEEEEE-----EEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence            87554        39999999999     88877654322111 1122345668999999999999999975

>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Calcium ATPase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.89  E-value=8.4e-24  Score=181.04  Aligned_cols=137  Identities=48%  Similarity=0.693  Sum_probs=106.8

Q ss_pred             CCCCCccccCChhHHHhhhhhhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccC
Q psy885           14 NPPNHCVSFSGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIG   93 (270)
Q Consensus        14 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~   93 (270)
                      +.+..........+........+++.|++++++||||.||||+|+++.+++....+ .+++|+|||||.|+++|+.+..+
T Consensus        93 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~-~~~l~vKGApe~iL~~C~~~~~~  171 (239)
T d1wpga3          93 NVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAV-GNKMFVKGAPEGVIDRCNYVRVG  171 (239)
T ss_dssp             CTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGG-CSEEEEEECHHHHHHTEEEEEET
T ss_pred             CCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccc-eeEEEEeCChHHHHHhccceecC
Confidence            33333344444555666667788999999999999999999999998876421111 47899999999999999998888


Q ss_pred             CeeeeccHHHHHh----------hhccceEEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEee
Q psy885           94 SQKVSLKDFSANT----------RFENLRSLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGM  156 (270)
Q Consensus        94 ~~~~~l~~~~~~~----------~~~GlRvl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~  156 (270)
                      +...++++..++.          +++|+|||||     |||+++..+.....++...+..+|++|+|+|++++
T Consensus       172 ~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~-----A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi  239 (239)
T d1wpga3         172 TTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL-----ATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM  239 (239)
T ss_dssp             TEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEE-----EEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred             CceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEE-----EEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence            9999999876542          6799999999     88888876554444445566778999999999986

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.88  E-value=9.9e-24  Score=165.14  Aligned_cols=87  Identities=28%  Similarity=0.296  Sum_probs=81.9

Q ss_pred             EEEEeecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCc
Q psy885          151 VGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARA  230 (270)
Q Consensus       151 lG~i~~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~  230 (270)
                      .+.++++|++|++++++|+.|+++||+++|+|||+..+|.++|++|||.                               
T Consensus        13 ~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~-------------------------------   61 (135)
T d2b8ea1          13 TLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-------------------------------   61 (135)
T ss_dssp             CCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-------------------------------
T ss_pred             EEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-------------------------------
Confidence            4468899999999999999999999999999999999999999999996                               


Q ss_pred             eEEEecChhhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          231 RLFSRVEPAHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       231 ~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      .+|++++|++|..+|+.+|+. ++|+|+|||.||++||.
T Consensus        62 ~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~   99 (135)
T d2b8ea1          62 LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA   99 (135)
T ss_dssp             EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHH
T ss_pred             hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHH
Confidence            899999999999999999875 68999999999999974

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.80  E-value=5.2e-24  Score=194.01  Aligned_cols=206  Identities=10%  Similarity=-0.096  Sum_probs=147.1

Q ss_pred             hhhhhhcceEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccce
Q psy885           33 RQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLR  112 (270)
Q Consensus        33 ~~~~~~~~~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlR  112 (270)
                      ...+++.|.....+||++.+|+|+++......      .+.++.||+++.+.- .     ......+.....+++.+|+|
T Consensus       115 ~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~------~~~~~~~~a~~~~~~-~-----~~~~~~~~~~~~~~a~~~~r  182 (380)
T d1qyia_         115 LQNISTNLADCFNLNEQLPLQFLDNVKVGKNN------IYAALEEFATTELHV-S-----DATLFSLKGALWTLAQEVYQ  182 (380)
T ss_dssp             HTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHH------HHHHHHHHHHHHTTC-S-----CCGGGSTTCHHHHHHHHHHH
T ss_pred             HHHHHHhccccccCCcchHHHHHhhhcccccc------hhHhhhhccHhhcCC-c-----HHHHHHHHhHHHHHHHHHHH
Confidence            56677888999999999999999887654431      455666777776521 1     22233455566777999999


Q ss_pred             EEEeecccccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCC--chhHHHHHHHHHhCCCeEEEEcCCCHHHHH
Q psy885          113 SLEPKSKVSAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPP--RKEVFDSIARCRAAGIRVIVITGDNKATAE  190 (270)
Q Consensus       113 vl~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~l--r~~~~~~I~~l~~agi~v~mlTGD~~~ta~  190 (270)
                      ++++     +++.++....           .....+...|++..++++  +++++++|+.|+++||+++|+|||+..+|.
T Consensus       183 ~l~~-----~~~~~~~~~~-----------~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~  246 (380)
T d1qyia_         183 EWYL-----GSKLYEDVEK-----------KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETV  246 (380)
T ss_dssp             HHHH-----HHHHHHHHHC-----------SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHH
T ss_pred             HHHH-----hhhccccccc-----------ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence            9999     7665421100           012233346788888885  559999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCccceeeechhhcCCCHHH---------HHHhccCceEEEecChhhHHHHHHHHhhCCCEEEEECCc
Q psy885          191 AICRRIGVFTEEEDTTGKSYSGREFDDLPLSE---------QKAAVARARLFSRVEPAHKSKIVEFLQGMNEISAMDSST  261 (270)
Q Consensus       191 ~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~---------~~~~~~~~~v~ar~tP~~K~~iV~~lq~~g~~V~miGDG  261 (270)
                      .+++++||...-.  ...+++|.+........         .-..+..+..++|.+|.+|..+|+.++..++.|+|||||
T Consensus       247 ~il~~lgl~~~F~--~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~  324 (380)
T d1qyia_         247 VPFENLGLLPYFE--ADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDS  324 (380)
T ss_dssp             HHHHHHTCGGGSC--GGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESS
T ss_pred             HHHHHcCCcccCC--cceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCC
Confidence            9999999974321  12355665432110000         001223346788999999999999999999999999999


Q ss_pred             Hhhhhhh
Q psy885          262 GKTELRI  268 (270)
Q Consensus       262 ~ND~~ai  268 (270)
                      +||+.|+
T Consensus       325 ~~D~~aa  331 (380)
T d1qyia_         325 LADLLSA  331 (380)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999885

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.6e-08  Score=83.24  Aligned_cols=99  Identities=11%  Similarity=0.113  Sum_probs=68.8

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccce--eeechhhcCCCHHHHHHhccCceEEEec
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGK--SYSGREFDDLPLSEQKAAVARARLFSRV  236 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~--~i~G~~~~~l~~~~~~~~~~~~~v~ar~  236 (270)
                      +++|++.++|+.|++.|++++++||.....+..+++.+|+..........  ..+|.-....            ..-.-.
T Consensus        82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~------------~~~p~~  149 (217)
T d1nnla_          82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD------------ETQPTA  149 (217)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC------------TTSGGG
T ss_pred             ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccce------------eeeeee
Confidence            47899999999999999999999999999999999999996321000000  0011100000            000013


Q ss_pred             ChhhHHHHHHHHhhC--CCEEEEECCcHhhhhhhc
Q psy885          237 EPAHKSKIVEFLQGM--NEISAMDSSTGKTELRIF  269 (270)
Q Consensus       237 tP~~K~~iV~~lq~~--g~~V~miGDG~ND~~ai~  269 (270)
                      .+..|..+++.++++  -..|.|+|||.||+.|+.
T Consensus       150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~  184 (217)
T d1nnla_         150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACP  184 (217)
T ss_dssp             STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTT
T ss_pred             ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHH
Confidence            467899999999764  246899999999998863

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.49  E-value=7.9e-08  Score=78.47  Aligned_cols=103  Identities=13%  Similarity=-0.045  Sum_probs=74.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      +++|++.++++.|++.|+++.++|+.....+..+.+.+|+...-. .....+.+..+...      ........++...|
T Consensus        75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~-an~~~~~~~~~~~~------~~~~~~~~~~~~k~  147 (226)
T d2feaa1          75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIY-CNHASFDNDYIHID------WPHSCKGTCSNQCG  147 (226)
T ss_dssp             CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEE-EEEEECSSSBCEEE------CTTCCCTTCCSCCS
T ss_pred             chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCcccee-eeeEEEeCCcceec------cccccccccccCCH
Confidence            578999999999999999999999999999999999988753200 00011111111000      00001133456789


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRI  268 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai  268 (270)
                      ..|..+++.++..++.|.|+||+.||..|+
T Consensus       148 ~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a  177 (226)
T d2feaa1         148 CCKPSVIHELSEPNQYIIMIGDSVTDVEAA  177 (226)
T ss_dssp             SCHHHHHHHHCCTTCEEEEEECCGGGHHHH
T ss_pred             HHHHHHHHHhcCCCceEEEEeCchhhHHHH
Confidence            999999999999899999999999999886

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=97.96  E-value=8.8e-06  Score=64.63  Aligned_cols=70  Identities=17%  Similarity=0.079  Sum_probs=55.5

Q ss_pred             HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChhhHHHHH
Q psy885          166 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPAHKSKIV  245 (270)
Q Consensus       166 ~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~~K~~iV  245 (270)
                      ..|+.|+..|+.+.++||+....+...++++++.                               .++....  .|...+
T Consensus        39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~-------------------------------~~~~~~~--~K~~~l   85 (177)
T d1k1ea_          39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK-------------------------------LFFLGKL--EKETAC   85 (177)
T ss_dssp             HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC-------------------------------EEEESCS--CHHHHH
T ss_pred             HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccc-------------------------------ccccccc--cHHHHH
Confidence            4799999999999999999999999999999986                               4444443  455555


Q ss_pred             HHHhh-C---CCEEEEECCcHhhhhhh
Q psy885          246 EFLQG-M---NEISAMDSSTGKTELRI  268 (270)
Q Consensus       246 ~~lq~-~---g~~V~miGDG~ND~~ai  268 (270)
                      +.+.+ .   ..-|+++|||.||..||
T Consensus        86 ~~~~~~~~i~~~~v~~vGDd~nDl~~l  112 (177)
T d1k1ea_          86 FDLMKQAGVTAEQTAYIGDDSVDLPAF  112 (177)
T ss_dssp             HHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred             HHHHHHhcCCcceeEEecCCccHHHHH
Confidence            54433 2   36799999999999887

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.73  E-value=3.6e-05  Score=65.70  Aligned_cols=43  Identities=16%  Similarity=0.288  Sum_probs=40.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE  201 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~  201 (270)
                      ++|+|+.+.++.|++.|+.+.++||--......+++++|+..+
T Consensus       135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~  177 (291)
T d2bdua1         135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS  177 (291)
T ss_dssp             CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBT
T ss_pred             CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCcc
Confidence            4899999999999999999999999999999999999998754

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.72  E-value=5.5e-05  Score=60.51  Aligned_cols=42  Identities=26%  Similarity=0.402  Sum_probs=38.2

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      .+.+.+.++|+.|+++|++++++||.....+..++..+++..
T Consensus        19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~   60 (230)
T d1wr8a_          19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG   60 (230)
T ss_dssp             CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCc
Confidence            467889999999999999999999999999999999998753

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.54  E-value=0.00037  Score=55.99  Aligned_cols=43  Identities=16%  Similarity=0.230  Sum_probs=38.5

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      ..+.+++.++++.|++.|++++++||.+...+..++..+|+..
T Consensus        19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~   61 (225)
T d1l6ra_          19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   61 (225)
T ss_dssp             SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc
Confidence            3466899999999999999999999999999999999998753

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=0.00011  Score=58.47  Aligned_cols=89  Identities=12%  Similarity=0.046  Sum_probs=63.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++.|+++.++|+.....+..+.+..|+..--    ..++++.+...                ++-.|
T Consensus        88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F----~~i~~~~~~~~----------------~Kp~~  147 (218)
T d1te2a_          88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF----DALASAEKLPY----------------SKPHP  147 (218)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEECTTSSC----------------CTTST
T ss_pred             cccchHHHHHHHhhhccccccccccccccccccccccccccccc----ccccccccccc----------------chhhH
Confidence            45799999999999999999999999999999999999996321    12444433221                11223


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +-=..+++.+.-....++|+||+.+|+.|
T Consensus       148 ~~~~~~~~~l~~~~~~~l~igD~~~di~a  176 (218)
T d1te2a_         148 QVYLDCAAKLGVDPLTCVALEDSVNGMIA  176 (218)
T ss_dssp             HHHHHHHHHHTSCGGGEEEEESSHHHHHH
T ss_pred             HHHHHHHHHcCCCchhcEEEeeCHHHHHH
Confidence            33334445554445679999999999655

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=7.2e-05  Score=61.78  Aligned_cols=43  Identities=23%  Similarity=0.291  Sum_probs=39.3

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE  201 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~  201 (270)
                      .+-+.+.++|++|++.|++++++||-+...+..+.+++++..+
T Consensus        21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~   63 (271)
T d1rkqa_          21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQP   63 (271)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCST
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCC
Confidence            4668899999999999999999999999999999999998754

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=97.22  E-value=0.00021  Score=56.71  Aligned_cols=88  Identities=11%  Similarity=0.100  Sum_probs=61.6

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecChh
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEPA  239 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP~  239 (270)
                      +.+++.++++.|++.|+++.++|+.....+..+.+.+||..--.    .++++.+...                ..-.|+
T Consensus        96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~----~~~~~~~~~~----------------~kp~p~  155 (224)
T d2hsza1          96 LYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS----EMLGGQSLPE----------------IKPHPA  155 (224)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS----EEECTTTSSS----------------CTTSSH
T ss_pred             hHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcc----cccccccccc----------------ccccch
Confidence            57999999999999999999999999999999999999863211    1222222111                112333


Q ss_pred             hHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          240 HKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       240 ~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      --..+.+.++-....++|+||..+|+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~  183 (224)
T d2hsza1         156 PFYYLCGKFGLYPKQILFVGDSQNDIFA  183 (224)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESSHHHHHH
T ss_pred             hhHHHHHHhhhhhhccchhcCcHHHHHH
Confidence            3344445555456679999999999654

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.15  E-value=0.00044  Score=53.91  Aligned_cols=44  Identities=18%  Similarity=0.268  Sum_probs=39.6

Q ss_pred             ecCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          156 MLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       156 ~~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ...++.+++.+.++.++..|..+.++||.....+....++.++.
T Consensus        72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (210)
T d1j97a_          72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD  115 (210)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred             hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchh
Confidence            34578899999999999999999999999999999999988775

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.10  E-value=0.0011  Score=51.37  Aligned_cols=94  Identities=9%  Similarity=0.054  Sum_probs=66.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      +..++....+..+ ..+.+++++|+........++...++.....    ..+....            ...........+
T Consensus        69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~----~~l~~~~------------~~~~~~~~~~~~  131 (206)
T d1rkua_          69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLC----HKLEIDD------------SDRVVGYQLRQK  131 (206)
T ss_dssp             CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEE----EEEEECT------------TSCEEEEECCSS
T ss_pred             cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhc----ceeeeec------------ccccccccccch
Confidence            4566777777666 4789999999999999999999888763210    0000000            011234455666


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      ..+..+++.++-...-|.|+|||.||+.||-
T Consensus       132 ~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~  162 (206)
T d1rkua_         132 DPKRQSVIAFKSLYYRVIAAGDSYNDTTMLS  162 (206)
T ss_dssp             SHHHHHHHHHHHTTCEEEEEECSSTTHHHHH
T ss_pred             hhHHHHHHHhcccccceEEecCCccCHHHHH
Confidence            7777888888888899999999999999974

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.07  E-value=0.0023  Score=50.98  Aligned_cols=43  Identities=16%  Similarity=0.159  Sum_probs=38.0

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      +...+.+.++|+.|+++|+.+++.||-....+..+.+++++..
T Consensus        16 ~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~   58 (243)
T d1wzca1          16 GYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET   58 (243)
T ss_dssp             SSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence            3345678899999999999999999999999999999999853

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.06  E-value=0.00046  Score=54.29  Aligned_cols=88  Identities=11%  Similarity=0.032  Sum_probs=58.0

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|++.|+++.++|+-.. .+..+.+..||..-    -..++.+.+..                ...-.|
T Consensus        82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~----f~~i~~s~~~~----------------~~Kp~~  140 (204)
T d2go7a1          82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY----FTEILTSQSGF----------------VRKPSP  140 (204)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG----EEEEECGGGCC----------------CCTTSS
T ss_pred             cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc----ccccccccccc----------------ccchhH
Confidence            3579999999999999999999998554 45667788898632    11222222211                111244


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +-=..+++.+.-...-|+||||+.+|..+
T Consensus       141 ~~~~~~~~~~~~~p~~~l~VgD~~~Di~~  169 (204)
T d2go7a1         141 EAATYLLDKYQLNSDNTYYIGDRTLDVEF  169 (204)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESSHHHHHH
T ss_pred             HHHHHHHHHhCCCCceEEEEeCCHHHHHH
Confidence            44444555554445689999999999654

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=97.01  E-value=0.00056  Score=55.84  Aligned_cols=90  Identities=16%  Similarity=0.052  Sum_probs=62.6

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      .+.+++.++++.|++.|+++.++|+.....+..+-+..|+..-..   ..++++.+...                .+-.|
T Consensus        99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~---d~~~~~d~~~~----------------~KP~p  159 (257)
T d1swva_          99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP---DFLVTPDDVPA----------------GRPYP  159 (257)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC---SCCBCGGGSSC----------------CTTSS
T ss_pred             ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccc---ccccccccccc----------------cccCh
Confidence            588999999999999999999999999999999999988863211   12344433221                11234


Q ss_pred             hhHHHHHHHHhhC-CCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGM-NEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~-g~~V~miGDG~ND~~a  267 (270)
                      +.=...++.+.-. ...|+||||..+|+.|
T Consensus       160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~a  189 (257)
T d1swva_         160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKE  189 (257)
T ss_dssp             HHHHHHHHHHTCCSGGGEEEEESSHHHHHH
T ss_pred             HHHHHHHHHhCCCCcceEEEEeCChhhHHH
Confidence            3434444545432 3569999999999754

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.93  E-value=0.00094  Score=53.36  Aligned_cols=41  Identities=12%  Similarity=0.109  Sum_probs=37.2

Q ss_pred             CchhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          160 PRKEVFDSIARCRAAG-IRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       160 lr~~~~~~I~~l~~ag-i~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      +-|++.++++.|++.| +++.++|+.....+..+.+..||..
T Consensus        92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~  133 (228)
T d2hcfa1          92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH  133 (228)
T ss_dssp             ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred             ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence            4689999999999987 8999999999999999999999864

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=96.90  E-value=0.00022  Score=58.72  Aligned_cols=40  Identities=10%  Similarity=0.163  Sum_probs=35.6

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      +.+.+.++|+.|++.|+.++++||=+...+..+.+++++.
T Consensus        21 ~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~   60 (269)
T d1rlma_          21 NQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDE   60 (269)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTT
T ss_pred             ChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcc
Confidence            3578999999999999999999999999998888888765

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.81  E-value=0.00062  Score=56.21  Aligned_cols=41  Identities=22%  Similarity=0.313  Sum_probs=37.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+-+.+.++|++|++.|++++++||=+...+..+++++++.
T Consensus        18 ~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~   58 (285)
T d1nrwa_          18 QVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK   58 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCC
Confidence            45688999999999999999999999999999999999875

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.0038  Score=49.15  Aligned_cols=40  Identities=18%  Similarity=0.235  Sum_probs=37.3

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      +-+.+.++|+.|++.|+.++++||-....+..+.+++++.
T Consensus        22 i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~   61 (232)
T d1xvia_          22 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ   61 (232)
T ss_dssp             SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence            5678899999999999999999999999999999999975

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.76  E-value=0.0014  Score=50.19  Aligned_cols=82  Identities=7%  Similarity=-0.066  Sum_probs=53.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGD-NKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD-~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      ++.|++.++++.|++.|+++.++|.- ....+..+-+..++.....                           .+...-.
T Consensus        46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~---------------------------~~~~~~k   98 (164)
T d1u7pa_          46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI---------------------------QREIYPG   98 (164)
T ss_dssp             CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS---------------------------EEEESSS
T ss_pred             ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce---------------------------eeecccC
Confidence            57899999999999999999999964 4566666666666642111                           2333333


Q ss_pred             hhhH--HHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          238 PAHK--SKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       238 P~~K--~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      |.-+  ..+.+.+.-....++|+||..+|+.+
T Consensus        99 p~~~~~~~~~~~~~~~~~~~l~igD~~~di~a  130 (164)
T d1u7pa_          99 SKVTHFERLHHKTGVPFSQMVFFDDENRNIID  130 (164)
T ss_dssp             CHHHHHHHHHHHHCCCGGGEEEEESCHHHHHH
T ss_pred             CChHHHHHHHHHhCCChHHEEEEcCCHHHHHH
Confidence            4332  22333333334678999999999655

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.50  E-value=0.0016  Score=51.12  Aligned_cols=82  Identities=16%  Similarity=0.149  Sum_probs=56.9

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.+.++.|+..+ ++.++|+.....+..+.+.+|+...-.    .++                      .+...+
T Consensus        84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd----~v~----------------------~~~~~~  136 (210)
T d2ah5a1          84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD----GIY----------------------GSSPEA  136 (210)
T ss_dssp             EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS----EEE----------------------EECSSC
T ss_pred             cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc----ccc----------------------cccccc
Confidence            46799999999998764 899999999999999999999874321    122                      222223


Q ss_pred             hhHHHHHHH----HhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEF----LQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~----lq~~g~~V~miGDG~ND~~a  267 (270)
                      ..|-.++..    +.-...-++||||+.+|+.|
T Consensus       137 ~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~a  169 (210)
T d2ah5a1         137 PHKADVIHQALQTHQLAPEQAIIIGDTKFDMLG  169 (210)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHH
T ss_pred             cccccccchhhhhhhcccccceeecCCHHHHHH
Confidence            333333333    32234579999999999765

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=96.36  E-value=0.0012  Score=54.15  Aligned_cols=40  Identities=20%  Similarity=0.179  Sum_probs=35.7

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV  198 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi  198 (270)
                      ++-+.+.++|++|++.|++++++||-+...+..++.++++
T Consensus        28 ~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~   67 (283)
T d2b30a1          28 KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENL   67 (283)
T ss_dssp             CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence            4678999999999999999999999999999988877653

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=96.30  E-value=0.00043  Score=54.65  Aligned_cols=88  Identities=9%  Similarity=0.062  Sum_probs=58.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.|++.++++.|+ .++++.++|+-....+..+.+..|+...    ...++++.+...                ..-.|
T Consensus        82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~----f~~i~~~~~~~~----------------~KP~p  140 (207)
T d2hdoa1          82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMR----MAVTISADDTPK----------------RKPDP  140 (207)
T ss_dssp             EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGG----EEEEECGGGSSC----------------CTTSS
T ss_pred             ccccchhhhhhhhc-cccccccccccccccccccccccccccc----cccccccccccc----------------chhhh
Confidence            35699999999997 5899999999999999999999888632    122333332211                11123


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +--..+++.++-...-++||||..+|+.|
T Consensus       141 ~~~~~~~~~~~~~~~~~l~VgDs~~Di~~  169 (207)
T d2hdoa1         141 LPLLTALEKVNVAPQNALFIGDSVSDEQT  169 (207)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEESSHHHHHH
T ss_pred             hhhcccccceeeeccceeEecCCHHHHHH
Confidence            33344444443233568999999999764

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.0031  Score=50.05  Aligned_cols=43  Identities=12%  Similarity=0.139  Sum_probs=38.5

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .-.+.|++.++++.|++.|+++.++|+........+...+|+.
T Consensus       125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~  167 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG  167 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred             ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence            3457899999999999999999999999999988888888875

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.06  E-value=0.0055  Score=49.10  Aligned_cols=41  Identities=12%  Similarity=0.199  Sum_probs=36.5

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT  200 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~  200 (270)
                      ++.|++.++++.|++ |+++.++|+........+-+.+|+..
T Consensus       109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~  149 (247)
T d2gfha1         109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS  149 (247)
T ss_dssp             CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred             ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence            467999999999985 89999999999999899899999864

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.83  E-value=0.0067  Score=46.80  Aligned_cols=86  Identities=10%  Similarity=-0.033  Sum_probs=53.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      ++.+++.+.|+.|++.|+++.++|+-...+. .+-+.+|+..-    -..++++.++..-                .-.|
T Consensus        79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~----fd~i~~~~~~~~~----------------KP~p  137 (187)
T d2fi1a1          79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY----FTEVVTSSSGFKR----------------KPNP  137 (187)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG----EEEEECGGGCCCC----------------TTSC
T ss_pred             cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc----ccccccccccccc----------------CCCH
Confidence            5679999999999999999999998766544 56677887532    1123333332111                1122


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +-=..+.+.+.  -.-++||||..+|+.|
T Consensus       138 ~~~~~~~~~~~--~~~~l~vgDs~~Di~a  164 (187)
T d2fi1a1         138 ESMLYLREKYQ--ISSGLVIGDRPIDIEA  164 (187)
T ss_dssp             HHHHHHHHHTT--CSSEEEEESSHHHHHH
T ss_pred             HHHHHHHHHcC--CCCeEEEeCCHHHHHH
Confidence            22223333332  2348999999999654

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=95.81  E-value=0.0017  Score=53.10  Aligned_cols=37  Identities=16%  Similarity=0.346  Sum_probs=29.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR  195 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~  195 (270)
                      .+-+.+.++|+.|+++|++++++||=.......++..
T Consensus        19 ~i~~~~~~al~~l~~~gi~v~~~TGR~~~~~~~l~~~   55 (260)
T d2rbka1          19 RIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSEL   55 (260)
T ss_dssp             SCCHHHHHHHHHHHHTTCEEEEECSSCGGGCCSCHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence            3567889999999999999999999665555544443

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.60  E-value=0.022  Score=45.46  Aligned_cols=37  Identities=14%  Similarity=0.258  Sum_probs=31.3

Q ss_pred             HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q psy885          165 FDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE  201 (270)
Q Consensus       165 ~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~  201 (270)
                      ...+..+++.|+.+.++||-....+..+.+++++..+
T Consensus        24 ~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~   60 (244)
T d1s2oa1          24 LQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEP   60 (244)
T ss_dssp             HHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCC
Confidence            3455567888999999999999999999999998654

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.52  E-value=0.0062  Score=48.43  Aligned_cols=40  Identities=18%  Similarity=0.153  Sum_probs=36.1

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      ++.|++.++++.|+ .|+++.++|+........+.+.+|+.
T Consensus       100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~  139 (230)
T d1x42a1         100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIK  139 (230)
T ss_dssp             CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCG
T ss_pred             cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccc
Confidence            56899999999996 58999999999999999999999986

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=94.46  E-value=0.045  Score=44.21  Aligned_cols=40  Identities=8%  Similarity=-0.016  Sum_probs=33.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF  199 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~  199 (270)
                      .+.+.+.++|+.+++. +.++++||=+...+..+.++.+..
T Consensus        19 ~i~~~~~~al~~l~~~-~~~~i~TGR~~~~~~~~~~~~~~~   58 (267)
T d1nf2a_          19 EISEKDRRNIEKLSRK-CYVVFASGRMLVSTLNVEKKYFKR   58 (267)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEECSSCHHHHHHHHHHHSSS
T ss_pred             ccCHHHHHHHHHHHcC-CEEEEECCCChHHHHHHHHHhccc
Confidence            4668899999999875 479999999988888888887754

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=94.45  E-value=0.065  Score=41.09  Aligned_cols=26  Identities=19%  Similarity=0.376  Sum_probs=23.5

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDN  185 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~  185 (270)
                      +-+++.++++.|+++|+++.++|.-.
T Consensus        28 ~~~gv~e~l~~L~~~g~~~~ivTNq~   53 (182)
T d2gmwa1          28 FIDGVIDAMRELKKMGFALVVVTNQS   53 (182)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred             ECCCHHHHHHHHhhcCchhhhhhccc
Confidence            44899999999999999999999865

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=94.40  E-value=0.023  Score=44.38  Aligned_cols=85  Identities=8%  Similarity=0.051  Sum_probs=54.1

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      .++-+++.++++.|++.|+++.++|+...  +..+.+..|+...-.    .++++.+...                  .-
T Consensus        90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~----~i~~~~~~~~------------------~K  145 (221)
T d1o08a_          90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFD----AIADPAEVAA------------------SK  145 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCS----EECCTTTSSS------------------CT
T ss_pred             ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccc----cccccccccc------------------cc
Confidence            45778999999999999999999999754  456677788864311    2333333211                  11


Q ss_pred             hhhHHHHHHHHhhC---CCEEEEECCcHhhhhh
Q psy885          238 PAHKSKIVEFLQGM---NEISAMDSSTGKTELR  267 (270)
Q Consensus       238 P~~K~~iV~~lq~~---g~~V~miGDG~ND~~a  267 (270)
                      |.- ..+-..+++.   ..-++||||..+|+.|
T Consensus       146 P~~-~~~~~~l~~~~i~~~~~l~VgD~~~di~~  177 (221)
T d1o08a_         146 PAP-DIFIAAAHAVGVAPSESIGLEDSQAGIQA  177 (221)
T ss_dssp             TST-HHHHHHHHHTTCCGGGEEEEESSHHHHHH
T ss_pred             cCh-HHHHHHHHHcCCCCceEEEEecCHHHHHH
Confidence            211 1133344443   3458899999999654

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=94.22  E-value=0.039  Score=43.76  Aligned_cols=24  Identities=38%  Similarity=0.582  Sum_probs=22.4

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITG  183 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTG  183 (270)
                      +-|++.++|+.|+++|+++.++|-
T Consensus        49 l~pgv~e~L~~L~~~G~~l~IvTN   72 (209)
T d2o2xa1          49 LRPQMLPAIATANRAGIPVVVVTN   72 (209)
T ss_dssp             BCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred             ecccHHHHHHHHHhhCCeEEEecc
Confidence            569999999999999999999993

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=94.15  E-value=0.024  Score=45.19  Aligned_cols=79  Identities=11%  Similarity=0.193  Sum_probs=54.5

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEe
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGDN----KATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSR  235 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD~----~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar  235 (270)
                      +.+++.+.++.+++.|++|+-|||=.    ..|+..+-+.+|+...+..  .                       .+|.+
T Consensus        87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~--~-----------------------vll~~  141 (209)
T d2b82a1          87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN--P-----------------------VIFAG  141 (209)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC--C-----------------------CEECC
T ss_pred             cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc--c-----------------------eEeeC
Confidence            56899999999999999999999832    4566777777898643211  1                       22322


Q ss_pred             cC--hhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          236 VE--PAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       236 ~t--P~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      -.  ...|...|+   + ..+++++||-.+|..|
T Consensus       142 ~~~~K~~rr~~Ik---~-y~I~l~~GD~l~Df~a  171 (209)
T d2b82a1         142 DKPGQNTKSQWLQ---D-KNIRIFYGDSDNDITA  171 (209)
T ss_dssp             CCTTCCCSHHHHH---H-TTEEEEEESSHHHHHH
T ss_pred             CCCCchHHHHHHH---H-cCeEEEecCCHHHHhH
Confidence            21  133444443   3 4589999999999765

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=93.34  E-value=0.031  Score=41.03  Aligned_cols=29  Identities=17%  Similarity=0.263  Sum_probs=26.4

Q ss_pred             cCCCchhHHHHHHHHHhCCCeEEEEcCCC
Q psy885          157 LDPPRKEVFDSIARCRAAGIRVIVITGDN  185 (270)
Q Consensus       157 ~d~lr~~~~~~I~~l~~agi~v~mlTGD~  185 (270)
                      .+.+.+++.++++.|++.|++++++||=.
T Consensus        34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~   62 (149)
T d1ltqa1          34 TDVINPMVVELSKMYALMGYQIVVVSGRE   62 (149)
T ss_dssp             GCCBCHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             cCccCHHHHHHHHHHHhccCeEEEEecCc
Confidence            57889999999999999999999999843

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=92.32  E-value=0.16  Score=39.02  Aligned_cols=89  Identities=12%  Similarity=0.104  Sum_probs=57.4

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecCh
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVEP  238 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~tP  238 (270)
                      .+.+++.++++.++..|+++.++|.-.......+-+..++...-.    .+++..+...-                +-.|
T Consensus        93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd----~~~~s~~~~~~----------------KP~p  152 (220)
T d1zrna_          93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD----HLLSVDPVQVY----------------KPDN  152 (220)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEESGGGTCC----------------TTSH
T ss_pred             cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccccc----ceeeeeeeecc----------------ccHH
Confidence            456899999999999999999999999999988888877764321    23333322111                1122


Q ss_pred             hhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          239 AHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       239 ~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      +-=..+++.+.-...-|+||||..+|+.+
T Consensus       153 ~~~~~~~~~~g~~p~e~l~VgD~~~Di~~  181 (220)
T d1zrna_         153 RVYELAEQALGLDRSAILFVASNAWDATG  181 (220)
T ss_dssp             HHHHHHHHHHTSCGGGEEEEESCHHHHHH
T ss_pred             HHHHHHHHHhCCCCceEEEEecChHhHHH
Confidence            22222333333233568899998888643

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.02  E-value=0.019  Score=44.30  Aligned_cols=27  Identities=11%  Similarity=0.192  Sum_probs=24.0

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCCC
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGDN  185 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD~  185 (270)
                      .+.+++.+.+..|++.|++++++|...
T Consensus        99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~  125 (225)
T d1zd3a1          99 KINRPMLQAALMLRKKGFTTAILTNTW  125 (225)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCCccHHHHHHHHHhccCccccccccc
Confidence            367999999999999999999999753

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.69  E-value=0.12  Score=39.76  Aligned_cols=89  Identities=7%  Similarity=0.026  Sum_probs=54.3

Q ss_pred             CCchhHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEE
Q psy885          159 PPRKEVFDSIARCRAAGIRVIVITGD----NKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFS  234 (270)
Q Consensus       159 ~lr~~~~~~I~~l~~agi~v~mlTGD----~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~a  234 (270)
                      .+.+++.+++..|++.|+++.++|+-    ............|+..--    ..++.+.+...                .
T Consensus        97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f----d~i~~s~~~~~----------------~  156 (222)
T d1cr6a1          97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF----DFLIESCQVGM----------------I  156 (222)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC----SEEEEHHHHSC----------------C
T ss_pred             CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh----ceeeehhhccC----------------C
Confidence            36799999999999999999999952    222333344455553211    12333322211                1


Q ss_pred             ecChhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          235 RVEPAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       235 r~tP~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      .-.|+-=...++.++-...-++||||...|+.+
T Consensus       157 KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~  189 (222)
T d1cr6a1         157 KPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKP  189 (222)
T ss_dssp             TTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHH
T ss_pred             CCChHHHHHHHHHhCCCcceEEEEECCHHHHHH
Confidence            124554555566665555668999999999754

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=91.60  E-value=0.071  Score=40.35  Aligned_cols=25  Identities=20%  Similarity=0.379  Sum_probs=22.7

Q ss_pred             CchhHHHHHHHHHhCCCeEEEEcCC
Q psy885          160 PRKEVFDSIARCRAAGIRVIVITGD  184 (270)
Q Consensus       160 lr~~~~~~I~~l~~agi~v~mlTGD  184 (270)
                      +-|++.++|+.|++.|++++++|.-
T Consensus        31 ~~pgv~e~L~~L~~~g~~l~i~TNq   55 (161)
T d2fpwa1          31 FEPGVIPQLLKLQKAGYKLVMITNQ   55 (161)
T ss_dssp             BCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred             ECccHHHHHHHHHHcCCceeeeccc
Confidence            4689999999999999999999963

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=89.39  E-value=0.3  Score=37.98  Aligned_cols=88  Identities=13%  Similarity=0.062  Sum_probs=55.4

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCccceeeechhhcCCCHHHHHHhccCceEEEecC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSGREFDDLPLSEQKAAVARARLFSRVE  237 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~~~~~~~~~i~G~~~~~l~~~~~~~~~~~~~v~ar~t  237 (270)
                      .++.+++.++++.|+  ++.+.++|.-+...+..+-+..|+...-    ..++++.+...-                +=.
T Consensus        92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f----d~v~~s~~~~~~----------------KP~  149 (245)
T d1qq5a_          92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF----DAVISVDAKRVF----------------KPH  149 (245)
T ss_dssp             CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTCC----------------TTS
T ss_pred             cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc----cccccccccccc----------------Ccc
Confidence            467789999999885  7889999999998888888888876432    234444443221                111


Q ss_pred             hhhHHHHHHHHhhCCCEEEEECCcHhhhhh
Q psy885          238 PAHKSKIVEFLQGMNEISAMDSSTGKTELR  267 (270)
Q Consensus       238 P~~K~~iV~~lq~~g~~V~miGDG~ND~~a  267 (270)
                      |+-=..+++.+.-...-|+||||..+|+.+
T Consensus       150 p~~f~~a~~~lg~~p~e~l~VgD~~~di~~  179 (245)
T d1qq5a_         150 PDSYALVEEVLGVTPAEVLFVSSNGFDVGG  179 (245)
T ss_dssp             HHHHHHHHHHHCCCGGGEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHhCCChhhEEEEeCCHHHHHH
Confidence            211122233333233459999999999643

>d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Potassium-transporting ATPase B chain, KdpB
species: Escherichia coli [TaxId: 562]

Probab=88.34  E-value=0.43  Score=34.47  Aligned_cols=81  Identities=10%  Similarity=0.119  Sum_probs=52.6

Q ss_pred             eEeEeeCCCCCCceEEEEEecCCCCCCCCCccEEEEeCChHHHHHhccccccCCeeeeccHHHHHhhhccceEEEeeccc
Q psy885           41 KKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKVSLKDFSANTRFENLRSLEPKSKV  120 (270)
Q Consensus        41 ~~~~~~pF~s~~krmsviv~~~~~~~~~~~~~~l~~KGApe~Il~~c~~~~~~~~~~~l~~~~~~~~~~GlRvl~~~~~~  120 (270)
                      .....+||....+...+.+           ....+..|++..|..++... ....+..+......++.+|..++.+    
T Consensus        55 ~~~~~~~~~~~~~~~g~~~-----------~g~~v~~G~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~G~Tvv~V----  118 (136)
T d2a29a1          55 LHATFVPFTAQSRMSGINI-----------DNRMIRKGSVDAIRRHVEAN-GGHFPTDVDQKVDQVARQGATPLVV----  118 (136)
T ss_dssp             TTCEEEEEETTTTEEEEEE-----------TTEEEEEECHHHHHHHHHHH-TCCCCHHHHHHHHHHHHTTSEEEEE----
T ss_pred             ccccccccccccceEEEEE-----------CCEEEEecHHHHHHHHHHHc-CCCCcHHHHHHHHHHHHCCCeEEEE----
Confidence            3344556666665444433           34567899998887765431 0111223445566678999999999    


Q ss_pred             ccceeCCCCcccccccccchhhcccCCeEEEEEEeecCCCc
Q psy885          121 SAIVPWGMKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPR  161 (270)
Q Consensus       121 ~a~~~~~~~~~~~~~~~~~~~~~ie~~l~~lG~i~~~d~lr  161 (270)
                       +                       .|-.++|+|++.|++|
T Consensus       119 -a-----------------------~d~~~~G~i~l~D~iK  135 (136)
T d2a29a1         119 -V-----------------------EGSRVLGVIALKDIVK  135 (136)
T ss_dssp             -E-----------------------ETTEEEEEEEEEESSC
T ss_pred             -E-----------------------ECCEEEEEEEEEeecC
Confidence             4                       3457899999999987

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=85.86  E-value=0.23  Score=38.08  Aligned_cols=29  Identities=10%  Similarity=0.155  Sum_probs=24.5

Q ss_pred             hHHHHHHHHhhCCCEEEEECCcHhhhhhhc
Q psy885          240 HKSKIVEFLQGMNEISAMDSSTGKTELRIF  269 (270)
Q Consensus       240 ~K~~iV~~lq~~g~~V~miGDG~ND~~ai~  269 (270)
                      .|..-++.|.+.. -+.++||+.||..|+-
T Consensus       159 ~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~  187 (229)
T d1u02a_         159 NKGSAIRSVRGER-PAIIAGDDATDEAAFE  187 (229)
T ss_dssp             CHHHHHHHHHTTS-CEEEEESSHHHHHHHH
T ss_pred             CHHHHHHHHhccc-cceeecCCCChHHHHh
Confidence            7999999998765 4678899999999874

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=83.64  E-value=1.8  Score=32.76  Aligned_cols=41  Identities=7%  Similarity=0.039  Sum_probs=32.8

Q ss_pred             CCCchhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q psy885          158 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE  201 (270)
Q Consensus       158 d~lr~~~~~~I~~l~~agi~v~mlTGD~~~ta~~iA~~~gi~~~  201 (270)
                      ..+.+++.+.++.|+   .+..++|+-....+..+-..+|+...
T Consensus        84 ~~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~  124 (222)
T d2fdra1          84 VKIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPY  124 (222)
T ss_dssp             CCBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGG
T ss_pred             cchhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccc
Confidence            357888888877664   56679999999999999999999743