Psyllid ID: psy8898

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------
Protein Sequence
YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLETGTKKKKKNMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQVILINGYL
Secondary Structure (PSIPRED)
cccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHHcHHHHHHHHHHccccccccccccccccccccccccccHHcccccccccccccccccHHHHHcccccHHHHHHHHHccccccccccHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHccccHHHHHHccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcccccHHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccHHHHHHHHccHHHHHHHHcccccccccccHHHHHHHcccHHHHHHHHccccccccccccccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHccccccccccHHHHHHHHHHHcccccccccccHHHHHccccccHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccccHHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHccccHHHHHHccccccHHHHHHccccHHHHHHHHHHcccccccccccHHHHHHHccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHccHHHHHHHHcccHHHHHHHHccccccHHHHHccccHHHHHHccccHHHHHHHcccHHHHHHHHcccccccccccccccHHHHHHHcccccccEEEEHHccccccccccccccccccHHHHHccHHHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHcccHHHHHHHccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccccHHHHHHHccccccccccccccccccHHHHHHHHHccccHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
HccHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHccHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHHHHcccccccccccccccHHHHHHHcccHHcccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHcccccccccHHHHHHHcccHHHHHHHHHccccEEEccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHccHHHHHHHHcccccccccccccccHHHHHHHcccHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccHcccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccccHHHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHcccccccEEccccccccHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHccHHHHHHHHHHHHcccccHHHcccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHccHccccHHHHHHccccHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHccccHHHHHHHHcccEEEEccccc
Coil and Loop (DISEMBL)
YGRKDVVEYLLASGasiharddgglhplhnacsfgHADVVRLLLEadanpntrdnwnftplheaaakgktdVCIGIYFaehssksnqyvygigggtgcpmhkdrscylahgadpflknqegqtpldlTVAEDVRSLLQDAMaqypgapscaetasvpppsqysntscgdnvslpppaqysgsggdsvslpptsppqplaletvimpsgqavalglvplhnacsyghFEVTEMLIKAGAnvnamdlwqftplheaaSKSRLEVCSLLLsegadptlhnchsksaidvapTRELQQRLSNEFKGHCLleacrqgdpsrvkkfltsdvvnfkhpytgdtplpgtLLIDLLSDDKEFITVAEEMQATVREhrdngqsggyTALQVAGEnskkllqeppsvvDLESQLleaskggdmTVVTRLLSscphivncrdldgrhstplhfaaGYNRVAVVEYLLAHgadvhskdnatdkwgftplheAAQKGRTQlsallplspsaandPLRELFEackggdltkvkklvnpqtvnardtagrkstplhfaaglvplhnacsyghYEVTEMLVKHGanvnvadlwkftPLHEAAAKALLQHgadinlkntdgktaldlavpctravlsgdhKKEELLEAARMMGgglhrytwplgttdigwcsccckmelmfmprikdefKGHCLleacrqgdpsrvkkfltsdvvnfkhpytgdtplhcavtspypkRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQtalhrtardDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEklcsspsfsqpgtLLIDLLSDDKEFITVAEEMQATVREhrdngqsggifsryNIIRIQKVQNRKLWERYVHRRAevadenggqaHERMLFHGSPFINAIVQKGFDERHAIRYVHRRaevadenggqaHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDqlsmaggletgtkkkkknmyygtltphnvkhganvnvadlwkftplheaaaKGKADIVRLLLqhgadpskknrdgatpldlvregdqDVSDLLRGNSALLDAAKKGNLGRVQKLLtadnincrdaqgrnstplhlaAGEKRHLLMCRVTLGKSFLQFNaikmahappghhsvmgrpssgglyfpeyvvYRGEQVILINGYL
Flexible Loop (DISEMBL)
YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEacrqgdpsrvKKFLTSDVVnfkhpytgdtplpGTLLIDLLSDDKEFITVAEEMQATvrehrdngqSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACkggdltkvkklvnpqtvnardtagrksTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTravlsgdhKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEacrqgdpsrvKKFLTSDVVNfkhpytgdtplhcavtspYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQtalhrtarddkTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQPGTLLIDLLSDDKEFITVAEEMQATvrehrdngqsggifsryniirIQKVQNRKLWERYVHRRAevadenggqAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLsmaggletgtkkkkknMYYGTLTphnvkhganVNVADLWKFTPLHEAAAKGKADIVRLLLqhgadpskknrdgatpldlvregdQDVSDLLRGNSAlldaakkgnlgrVQKLLTadnincrdaqgrnstPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQVILINGYL
Low Complexity Region (SEG)
YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQlsallplspsaandplRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLETGTkkkkkNMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQVILINGYL
Disordered region (IsUnstruct)
*****VVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLK*******LDLTVA*********************************************************************LETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHS**AIDV*********LSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAE***************************************************GDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLH**************************ELFEACKGGDLTKVKKLVN**************TPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQPGTLLIDLLSDDKEFITVAEEMQA**********SGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGV********************YYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQ***********************************LLDAAKKGNLGRVQKLLTADNINCRDAQ****TPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKMAHA************SGGLYFPEYVVYRGEQVILINGY*
Disordered Region (DISOPRED)
YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLETGTKKKKKNMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQVILINGYL
Disordered Region (DISEMBL)
YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPA*************PTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLETGTKKKKKNMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQVILINGYL
Disordered Region (DISPRO)
YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVN*******KSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLETGTKKKKKNMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQVILING*L
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLETGTKKKKKNMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQVILINGYL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	1236	2.2.26 [Sep-21-2011]
Q3UES3	1166	Tankyrase-2 OS=Mus muscul	yes	N/A	0.453	0.481	0.423	1e-140
Q9H2K2	1166	Tankyrase-2 OS=Homo sapie	yes	N/A	0.453	0.481	0.420	1e-140
Q6PFX9	1320	Tankyrase-1 OS=Mus muscul	no	N/A	0.455	0.426	0.413	1e-136
O95271	1327	Tankyrase-1 OS=Homo sapie	no	N/A	0.455	0.424	0.411	1e-135
Q8N8A2	993	Serine/threonine-protein	no	N/A	0.567	0.706	0.250	3e-27
B2RXR6	993	Serine/threonine-protein	no	N/A	0.594	0.740	0.253	4e-26
G5E8K5	1961	Ankyrin-3 OS=Mus musculus	no	N/A	0.538	0.339	0.253	5e-26
Q8C8R3	3898	Ankyrin-2 OS=Mus musculus	no	N/A	0.304	0.096	0.318	3e-25
Q01484	3957	Ankyrin-2 OS=Homo sapiens	no	N/A	0.304	0.095	0.318	9e-25
Q12955	4377	Ankyrin-3 OS=Homo sapiens	no	N/A	0.402	0.113	0.281	1e-24

>sp|Q3UES3|TNKS2_MOUSE Tankyrase-2 OS=Mus musculus GN=Tnks2 PE=2 SV=2

 Score =  500 bits (1287), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 324/765 (42%), Positives = 410/765 (53%), Gaps = 204/765 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +GRKDVVEYLL +GA++ ARDDGGL PLHNACSFGHA+VV LLL+  A+PN RDNWN+TP
Sbjct: 68  FGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLQHGADPNARDNWNYTP 127

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAA KGK DVCI +                               L HGA+P ++N +
Sbjct: 128 LHEAAIKGKIDVCIVL-------------------------------LQHGAEPTIRNTD 156

Query: 121 GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
           G+T LDL      +++L     +D + +   + +  +  ++  P    N +C        
Sbjct: 157 GRTALDLA-DPSAKAVLTGDYKKDELLESARSGNEEKMMALLTPL---NVNC-------- 204

Query: 176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
              ++  G  S  L   +    + +  +++  G  V       LVPLHNACSYGH+EVTE
Sbjct: 205 ---HASDGRKSTPLHLAAGYNRVKIVQLLLHHGADVHAKDKGDLVPLHNACSYGHYEVTE 261

Query: 232 MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
           +L+K GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH+KSAID+APT +
Sbjct: 262 LLVKHGACVNAMDLWQFTPLHEAASKNRIEVCSLLLSYGADPTLLNCHNKSAIDLAPTAQ 321

Query: 292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT--------PLPGTLL 343
           L++RLS EFKGH LL+A R+ D +R+KK L+ ++VNFKHP T +T        P P    
Sbjct: 322 LKERLSYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALHCAAASPYPKRKQ 381

Query: 344 I-DLL--------SDDKEFIT---------------VAEEMQATVREHRDNGQSG----- 374
           I +LL           KEF+T               V  + +A V      GQ+      
Sbjct: 382 ICELLLRKGANTNEKTKEFLTPLHVASENAHNDVVEVVVKHEAKVNALDSLGQTSLHRAA 441

Query: 375 ------------------------GYTALQVAGENSKKLLQEPPSV--VDLESQLLEASK 408
                                   G+TALQ+  EN ++LLQE  S+   + + QLLEA+K
Sbjct: 442 HCGHLQTCRLLLSYGCDPNIISLQGFTALQMGNENVQQLLQEGASLGHSEADRQLLEAAK 501

Query: 409 GGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD--- 465
            GD+  V +L +     VNCRD++GR STPLHFAAGYNRV+VVEYLL HGADVH+KD   
Sbjct: 502 AGDVETVKKLCTV--QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGG 559

Query: 466 --------------------------NATDKWGFTPLHEAAQKGRTQLSALL---PLSPS 496
                                     N  D W FTPLHEAA KG+ ++  LL      P+
Sbjct: 560 LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT 619

Query: 497 AAN------------------DPLR---ELFEACKGGDLTKVKKLVNPQTVNARDTAGRK 535
             N                  D LR    L +A K G L +VKKL +P  VN RDT GR 
Sbjct: 620 KKNRDGNTPLDLVKDGDTDIQDLLRGDAALLDAAKKGCLARVKKLSSPDNVNCRDTQGRH 679

Query: 536 STPLHFAA------------------------GLVPLHNACSYGHYEVTEMLVKHGANVN 571
           STPLH AA                        GL+PLHNA SYGH +V  +L+K+ A VN
Sbjct: 680 STPLHLAAGYNNLEVAEYLLQHGADVNAQDKGGLIPLHNAASYGHVDVAALLIKYNACVN 739

Query: 572 VADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDL 609
             D W FTPLHEAA K        LL HGAD  LKN +G+T LDL
Sbjct: 740 ATDKWAFTPLHEAAQKGRTQLCALLLAHGADPTLKNQEGQTPLDL 784

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles (By similarity).$.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 3EC: 0

>sp|Q9H2K2|TNKS2_HUMAN Tankyrase-2 OS=Homo sapiens GN=TNKS2 PE=1 SV=1

 Score =  498 bits (1283), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 322/765 (42%), Positives = 410/765 (53%), Gaps = 204/765 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +GRKDVVEYLL +GA++ ARDDGGL PLHNACSFGHA+VV LLL   A+PN RDNWN+TP
Sbjct: 68  FGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLRHGADPNARDNWNYTP 127

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAA KGK DVCI +                               L HGA+P ++N +
Sbjct: 128 LHEAAIKGKIDVCIVL-------------------------------LQHGAEPTIRNTD 156

Query: 121 GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
           G+T LDL      +++L     +D + +   + +  +  ++  P    N +C        
Sbjct: 157 GRTALDLA-DPSAKAVLTGEYKKDELLESARSGNEEKMMALLTPL---NVNC-------- 204

Query: 176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
              ++  G  S  L   +    + +  +++  G  V       LVPLHNACSYGH+EVTE
Sbjct: 205 ---HASDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVPLHNACSYGHYEVTE 261

Query: 232 MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
           +L+K GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH+KSAID+APT +
Sbjct: 262 LLVKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSAIDLAPTPQ 321

Query: 292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT--------PLPGTLL 343
           L++RL+ EFKGH LL+A R+ D +R+KK L+ ++VNFKHP T +T        P P    
Sbjct: 322 LKERLAYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALHCAAASPYPKRKQ 381

Query: 344 I---------DLLSDDKEFIT---------------VAEEMQATVREHRDNGQSG----- 374
           I         ++    KEF+T               V  + +A V    + GQ+      
Sbjct: 382 ICELLLRKGANINEKTKEFLTPLHVASEKAHNDVVEVVVKHEAKVNALDNLGQTSLHRAA 441

Query: 375 ------------------------GYTALQVAGENSKKLLQEPPSVVDLES--QLLEASK 408
                                   G+TALQ+  EN ++LLQE  S+ + E+  QLLEA+K
Sbjct: 442 YCGHLQTCRLLLSYGCDPNIISLQGFTALQMGNENVQQLLQEGISLGNSEADRQLLEAAK 501

Query: 409 GGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD--- 465
            GD+  V +L +     VNCRD++GR STPLHFAAGYNRV+VVEYLL HGADVH+KD   
Sbjct: 502 AGDVETVKKLCTV--QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGG 559

Query: 466 --------------------------NATDKWGFTPLHEAAQKGRTQLSALL---PLSPS 496
                                     N  D W FTPLHEAA KG+ ++  LL      P+
Sbjct: 560 LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT 619

Query: 497 AAN------------------DPLR---ELFEACKGGDLTKVKKLVNPQTVNARDTAGRK 535
             N                  D LR    L +A K G L +VKKL +P  VN RDT GR 
Sbjct: 620 KKNRDGNTPLDLVKDGDTDIQDLLRGDAALLDAAKKGCLARVKKLSSPDNVNCRDTQGRH 679

Query: 536 STPLHFAA------------------------GLVPLHNACSYGHYEVTEMLVKHGANVN 571
           STPLH AA                        GL+PLHNA SYGH +V  +L+K+ A VN
Sbjct: 680 STPLHLAAGYNNLEVAEYLLQHGADVNAQDKGGLIPLHNAASYGHVDVAALLIKYNACVN 739

Query: 572 VADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDL 609
             D W FTPLHEAA K        LL HGAD  LKN +G+T LDL
Sbjct: 740 ATDKWAFTPLHEAAQKGRTQLCALLLAHGADPTLKNQEGQTPLDL 784

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: 0

>sp|Q6PFX9|TNKS1_MOUSE Tankyrase-1 OS=Mus musculus GN=Tnks PE=1 SV=1

 Score =  486 bits (1251), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 317/767 (41%), Positives = 407/767 (53%), Gaps = 204/767 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +GRKDVVE+LL  GA++HARDDGGL PLHNACSFGHA+VV LLL   A+PN RDNWN+TP
Sbjct: 219 FGRKDVVEHLLQMGANVHARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYTP 278

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAA KGK DVCI +                               L HGADP ++N +
Sbjct: 279 LHEAAIKGKIDVCIVL-------------------------------LQHGADPNIRNTD 307

Query: 121 GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
           G++ LDL      +++L     +D + +   + +  +  ++  P    N +C        
Sbjct: 308 GKSALDL-ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPL---NVNC-------- 355

Query: 176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
              ++  G  S  L   +    + +  +++  G  V      GLVPLHNACSYGH+EVTE
Sbjct: 356 ---HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTE 412

Query: 232 MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
           +L+K GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH KSA+D+APT E
Sbjct: 413 LLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPE 472

Query: 292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPL------------- 338
           L++RL+ EFKGH LL+A R+ D ++VKK L  +++NFK P + +T L             
Sbjct: 473 LRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQ 532

Query: 339 PGTLLI----DLLSDDKEFIT----VAEEMQATVRE--HRDNGQ-----SGGYTAL---- 379
              LL+    ++   +K+F+T     AE     V E  H+   +     S G TAL    
Sbjct: 533 VAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAA 592

Query: 380 -----------------------------QVAGENSKKLLQE--PPSVVDLESQLLEASK 408
                                        Q+  E  +++L E  P    D++ +LLEASK
Sbjct: 593 LAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSESTPMRTSDVDYRLLEASK 652

Query: 409 GGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD--- 465
            GD+  V +L S  P  VNCRDL+GRHSTPLHFAAGYNRV+VVEYLL HGADVH+KD   
Sbjct: 653 AGDLETVKQLCS--PQNVNCRDLEGRHSTPLHFAAGYNRVSVVEYLLHHGADVHAKDKGG 710

Query: 466 --------------------------NATDKWGFTPLHEAAQKGRTQLSALL---PLSPS 496
                                     N  D W FTPLHEAA KG+ ++  LL      P+
Sbjct: 711 LVPLHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAKGKYEICKLLLKHGADPT 770

Query: 497 AAN------------------DPLR---ELFEACKGGDLTKVKKLVNPQTVNARDTAGRK 535
             N                  D LR    L +A K G L +V+KL  P+ +N RDT GR 
Sbjct: 771 KKNRDGNTPLDLVKEGDTDIQDLLRGDAALLDAAKKGCLARVQKLCTPENINCRDTQGRN 830

Query: 536 STPLHFAA------------------------GLVPLHNACSYGHYEVTEMLVKHGANVN 571
           STPLH AA                        GL+PLHNA SYGH ++  +L+K+   VN
Sbjct: 831 STPLHLAAGYNNLEVAEYLLEHGADVNAQDKGGLIPLHNAASYGHVDIAALLIKYNTCVN 890

Query: 572 VADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLAV 611
             D W FTPLHEAA K        LL HGAD  +KN +G+T LDLA 
Sbjct: 891 ATDKWAFTPLHEAAQKGRTQLCALLLAHGADPTMKNQEGQTPLDLAT 937

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: 0

>sp|O95271|TNKS1_HUMAN Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2

 Score =  484 bits (1247), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 316/767 (41%), Positives = 406/767 (52%), Gaps = 204/767 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +GRKDVVE+LL  GA++HARDDGGL PLHNACSFGHA+VV LLL   A+PN RDNWN+TP
Sbjct: 226 FGRKDVVEHLLQMGANVHARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYTP 285

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAA KGK DVCI +                               L HGADP ++N +
Sbjct: 286 LHEAAIKGKIDVCIVL-------------------------------LQHGADPNIRNTD 314

Query: 121 GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
           G++ LDL      +++L     +D + +   + +  +  ++  P    N +C        
Sbjct: 315 GKSALDL-ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPL---NVNC-------- 362

Query: 176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
              ++  G  S  L   +    + +  +++  G  V      GLVPLHNACSYGH+EVTE
Sbjct: 363 ---HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTE 419

Query: 232 MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
           +L+K GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH KSA+D+APT E
Sbjct: 420 LLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPE 479

Query: 292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTL--------- 342
           L++RL+ EFKGH LL+A R+ D ++VKK L  +++NFK P + +T L   +         
Sbjct: 480 LRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQ 539

Query: 343 LIDLL--------SDDKEFIT----VAEEMQATVRE--HRDNGQSG-----GYTAL---- 379
           + +LL          +K+F+T     AE     V E  H+   +       G TAL    
Sbjct: 540 VTELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDTLGQTALHRAA 599

Query: 380 -----------------------------QVAGENSKKLLQE--PPSVVDLESQLLEASK 408
                                        Q+  E  +++L E  P    D++ +LLEASK
Sbjct: 600 LAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSESTPIRTSDVDYRLLEASK 659

Query: 409 GGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD--- 465
            GD+  V +L SS    VNCRDL+GRHSTPLHFAAGYNRV+VVEYLL HGADVH+KD   
Sbjct: 660 AGDLETVKQLCSS--QNVNCRDLEGRHSTPLHFAAGYNRVSVVEYLLHHGADVHAKDKGG 717

Query: 466 --------------------------NATDKWGFTPLHEAAQKGRTQLSALL---PLSPS 496
                                     N  D W FTPLHEAA KG+ ++  LL      P+
Sbjct: 718 LVPLHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAKGKYEICKLLLKHGADPT 777

Query: 497 AAN------------------DPLR---ELFEACKGGDLTKVKKLVNPQTVNARDTAGRK 535
             N                  D LR    L +A K G L +V+KL  P+ +N RDT GR 
Sbjct: 778 KKNRDGNTPLDLVKEGDTDIQDLLRGDAALLDAAKKGCLARVQKLCTPENINCRDTQGRN 837

Query: 536 STPLHFAA------------------------GLVPLHNACSYGHYEVTEMLVKHGANVN 571
           STPLH AA                        GL+PLHNA SYGH ++  +L+K+   VN
Sbjct: 838 STPLHLAAGYNNLEVAEYLLEHGADVNAQDKGGLIPLHNAASYGHVDIAALLIKYNTCVN 897

Query: 572 VADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLAV 611
             D W FTPLHEAA K        LL HGAD  +KN +G+T LDLA 
Sbjct: 898 ATDKWAFTPLHEAAQKGRTQLCALLLAHGADPTMKNQEGQTPLDLAT 944

Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: 0

>sp|Q8N8A2|ANR44_HUMAN Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Homo sapiens GN=ANKRD44 PE=1 SV=3

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 213/850 (25%), Positives = 325/850 (38%), Gaps = 148/850 (17%)

Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           G  ++V  LLA GA+I+A D      LH A   GH DVV LL+   A    +D   +TPL
Sbjct: 151 GHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTCKDKKGYTPL 210

Query: 62  HEAAAKGKTDVC-----IGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSC--YLAHGADP 114
           H AA+ G+ +V      +G+   E +   N  ++       C   +D      + +GA+ 
Sbjct: 211 HAAASNGQINVVKHLLNLGVEIDEINVYGNTALH-----IACYNGQDAVVNELIDYGANV 265

Query: 115 FLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLP 174
              N  G TPL    A    +L  + +    GA    ++     P     T+     +  
Sbjct: 266 NQPNNNGFTPLHFAAASTHGALCLELLVN-NGADVNIQSKDGKSPLHM--TAVHGRFTRS 322

Query: 175 PPAQYSGSGGDSVSLPPTSP-------PQPLALETVIMPSGQAVALG---LVPLHNACSY 224
                +G   D V     +P          L + T+I         G   + PLH A   
Sbjct: 323 QTLIQNGGEIDCVDKDGNTPLHVAARYGHELLINTLITSGADTAKCGIHSMFPLHLAALN 382

Query: 225 GHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD---------PTL 275
            H +    L+ +G  ++  D +  T LH AA+   +E   LL S GAD           L
Sbjct: 383 AHSDCCRKLLSSGFEIDTPDKFGRTCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRTPL 442

Query: 276 H----NCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHP 331
           H    NCH    I+   T       ++++ G   L      D  R K  L +   N +  
Sbjct: 443 HYAAANCHFH-CIETLVTTGANVNETDDW-GRTALHYAAASDMDRNKTILGNAHDNSEEL 500

Query: 332 YTGD--TPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTA-------LQVA 382
                      TL ++ L        +  +   ++R+ ++   S  Y A       L++ 
Sbjct: 501 ERARELKEKEATLCLEFL--------LQNDANPSIRD-KEGYNSIHYAAAYGHRQCLELL 551

Query: 383 GENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFA 442
            E +    +E  S    +S L  A+  G    +  LL S   + + RD  GR  T L  A
Sbjct: 552 LERTNSGFEESDSGAT-KSPLHLAAYNGHHQALEVLLQSLVDL-DIRDEKGR--TALDLA 607

Query: 443 AGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPL 502
           A       VE L+  GA +  KDN T +   TPLH +   G T                L
Sbjct: 608 AFKGHTECVEALINQGASIFVKDNVTKR---TPLHASVINGHTLC--------------L 650

Query: 503 RELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEM 562
           R L E              NP+ V+ +D           A G  PL  A +YGH +   +
Sbjct: 651 RLLLEIAD-----------NPEAVDVKD-----------AKGQTPLMLAVAYGHIDAVSL 688

Query: 563 LVKHGANVNVADLWKFTPLH-------EAAAKALLQHGADINLKNTDGKTALDLAVPCTR 615
           L++  ANV+  D+   T LH       E   + LL+    I  K++ G+T L  A     
Sbjct: 689 LLEKEANVDTVDILGCTALHRGIMTGHEECVQMLLEQEVSILCKDSRGRTPLHYAAARGH 748

Query: 616 AVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHC 675
           A         ELL+ A             L   D     CC K    + P          
Sbjct: 749 ATWLS-----ELLQMA-------------LSEED-----CCFKDNQGYTP---------- 775

Query: 676 LLEACRQGDPSRVKKFLTSDVVN--FKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAH 733
           L  AC  G+ + ++  L          +P+T   PLHCA+ + +    +++   I     
Sbjct: 776 LHWACYNGNENCIEVLLEQKCFRKFIGNPFT---PLHCAIINDHGNCASLLLGAIDSSI- 831

Query: 734 LNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL 793
           ++ ++ +   P+H AA   H++ L  LLR  A VN VD  G+TAL   A + +  AV +L
Sbjct: 832 VSCRDDKGRTPLHAAAFADHVECLQLLLRHSAPVNAVDNSGKTALMMAAENGQAGAVDIL 891

Query: 794 L-SHNADTSI 802
           + S  AD ++
Sbjct: 892 VNSAQADLTV 901

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Homo sapiens (taxid: 9606)

>sp|B2RXR6|ANR44_MOUSE Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus GN=Ankrd44 PE=2 SV=1

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 232/916 (25%), Positives = 357/916 (38%), Gaps = 181/916 (19%)

Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD-NWNFTP 60
           G  +++E L+ SGA ++A+D+  L PLH A +    + V++L++  A+ N RD NW  TP
Sbjct: 52  GDAEIIELLILSGARVNAKDNMWLTPLHRAVASRSEEAVQVLIKHSADVNARDKNWQ-TP 110

Query: 61  LHEAAAKGKTDVCIGIYF---------------AEHSSKSNQYVYGI------GGGTGCP 99
           LH AAA  K   C  +                 A H +  N ++  +      G      
Sbjct: 111 LHVAAAN-KAVKCAEVIIPLLSSVNVSDRGGRTALHHAALNGHMEMVNLLLAKGANINAF 169

Query: 100 MHKDR---------------SCYLAHGADPFLKNQEGQTPLDLTVAED----VRSLLQ-- 138
             KDR               +  + HGA+   K+++G TPL    +      V+ LL   
Sbjct: 170 DKKDRRALHWAAYMGHLDVVALLINHGAEVTCKDKKGYTPLHAAASNGQISVVKHLLNLG 229

Query: 139 ---DAMAQYPGAP---SC--AETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLP 190
              D +  Y       +C   + A V     Y     G NV+ P     + SG   +   
Sbjct: 230 VEIDEINVYGNTALHIACYNGQDAVVNELIDY-----GANVNQP-----NNSGFTPLHFA 279

Query: 191 PTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLW 246
             S    L LE +++ +G  V +    G  PLH    +G F  ++ LI+ G  ++ +D  
Sbjct: 280 AASTHGALCLE-LLVNNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEIDCVDKD 338

Query: 247 QFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE----LQQRLSNEFK- 301
             TPLH AA      + + L++ GAD      HS   + +A         ++ LS+ F+ 
Sbjct: 339 GNTPLHVAARHGHELLINTLITSGADTAKCGIHSMFPLHLAALNAHSDCCRKLLSSGFEI 398

Query: 302 ------GHCLLEACRQGDPSRVKKFLTSDVVNF-KHPYTGDTPLPGTLLIDLLSDDKEFI 354
                 G   L A   G      K L S   +F K    G TPL            K  +
Sbjct: 399 DTPDTFGRTCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRTPLHYAAANCHFHCIKALV 458

Query: 355 TVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEAS---KGGD 411
           T      A V E  D G++  + A     + +K +L          S+ LE +   K  D
Sbjct: 459 TTG----ANVNETDDWGRTALHYAAASDMDRNKMILGNAHD----NSEELERAREVKEKD 510

Query: 412 MTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH-GADVHSKDNATDK 470
             +    L       + RD +G +S  +H+AA Y     +E LL          D    K
Sbjct: 511 AALCLEFLLQNDANPSIRDKEGYNS--IHYAAAYGHRQCLELLLERTNTGFEESDGGALK 568

Query: 471 WGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRE------LFEACKGGDLTKVKKLVNP- 523
              +PLH AA  G  Q  AL  L  S  +  +R+      L+ A   G    V+ LVN  
Sbjct: 569 ---SPLHLAAYNGHHQ--ALEVLLQSLVDLDIRDEKGRTALYLAAFKGHTECVEALVNQG 623

Query: 524 QTVNARDTAGRKSTPLHF---------------------------AAGLVPLHNACSYGH 556
            ++  +D   ++ TPLH                            A G  PL  A +YGH
Sbjct: 624 ASIFVKDNVTKR-TPLHASVINGHTLCLRLLLETADNPEVVDVKDAKGQTPLMLAVAYGH 682

Query: 557 YEVTEMLVKHGANVNVADLWKFTPL-------HEAAAKALLQHGADINLKNTDGKTALDL 609
            +   +L++  ANV+  D+   T L       HE   + LL+  A I  K++ G+T L  
Sbjct: 683 IDAVSLLLEKEANVDAVDIVGCTALHRGIMTGHEECVQMLLEQEASILCKDSRGRTPLHY 742

Query: 610 AVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKD 669
           A     A         ELL+ A             L   D     CC K    + P    
Sbjct: 743 AAARGHATW-----LNELLQIA-------------LSEED-----CCLKDNQGYTP---- 775

Query: 670 EFKGHCLLEACRQGDPSRVKKFLTSDVVN--FKHPYTGDTPLHCAVTSPYPKRKAIVESL 727
                 L  AC  G+ + ++  L          +P+   TPLHCA+ + +    +++   
Sbjct: 776 ------LHWACYNGNENCIEVLLEQKCFRKFIGNPF---TPLHCAIINGHESCASLLLGA 826

Query: 728 IRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKT 787
           I     ++ ++ +    +H AA   H + L  LLR  A+VN VD  G+TAL   A + + 
Sbjct: 827 IDPSI-VSCRDDKGRTTLHAAAFGDHAECLQLLLRHDAQVNAVDNSGKTALMMAAENGQA 885

Query: 788 QAVRVLL-SHNADTSI 802
            AV +L+ S  AD ++
Sbjct: 886 GAVDILVNSAQADLTV 901

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Mus musculus (taxid: 10090)

>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 215/849 (25%), Positives = 322/849 (37%), Gaps = 183/849 (21%)

Query: 11  LASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKT 70
           + +G  ++  +  GL+ LH A   GH +VV  LL+ +AN +       T LH A+  G+ 
Sbjct: 44  IKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAATKKGNTALHIASLAGQA 103

Query: 71  DVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVA 130
           +V                                   + +GA+   ++Q G TPL +   
Sbjct: 104 EVV-------------------------------KVLVTNGANVNAQSQNGFTPLYMAAQ 132

Query: 131 ED----VRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDS 186
           E+    VR LL +  +Q                      S        P A     G D 
Sbjct: 133 ENHLEVVRFLLDNGASQ----------------------SLATEDGFTPLAVALQQGHDQ 170

Query: 187 VSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLW 246
           V              ++++ +     + L  LH A      +   +L++   N +     
Sbjct: 171 VV-------------SLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDTNADVESKS 217

Query: 247 QFTPLHEAASKSRLEVCSLLLSEGA--DPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHC 304
            FTPLH AA    + V +LLL+  A  D T  N       D+ P                
Sbjct: 218 GFTPLHIAAHYGNINVATLLLNRAAAVDFTARN-------DITP---------------- 254

Query: 305 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATV 364
           L  A ++G+ + VK  L            G TPL         S  ++ + +  +  A +
Sbjct: 255 LHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLH----CGARSGHEQVVEMLLDRSAPI 310

Query: 365 REHRDNGQSGGYTALQVAGENSKKLL-QEPPSVVDLESQLLEA----SKGGDMTVVTRLL 419
                NG S  + A Q    N  +LL Q    V D+ +  L A    +  G   V   LL
Sbjct: 311 LSKTKNGLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLL 370

Query: 420 --SSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLH 477
              + P   N + L+G   TPLH A   NR+ V+E LL HGA +     A  + G TP+H
Sbjct: 371 DKKASP---NAKALNG--FTPLHIACKKNRIRVMELLLKHGASIQ----AVTESGLTPIH 421

Query: 478 EAAQKGRTQLSALLP---LSPSAANDPLR---ELFEACKGGDLTKVKKLVNPQTVNARDT 531
            AA  G   + + L     SP+  N  +R    L  A + G    V+ LV          
Sbjct: 422 VAAFMGHVNIVSQLMHHGASPNTTN--VRGETALHMAARSGQAEVVRYLVQ-DGAQVEAK 478

Query: 532 AGRKSTPLHFAA------------------------GLVPLHNACSYGHYEVTEMLVKHG 567
           A    TPLH +A                        G  PLH A   GH +V   L+ HG
Sbjct: 479 AKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHG 538

Query: 568 ANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSG 620
           A++++     FTPLH AA       A  LLQ  A  +     G T L +A          
Sbjct: 539 ASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAA-------HY 591

Query: 621 DHKKEELL---EAARMMGGGLHRYTWPL------GTTDIGWCSCCCKMELMFMPRIKDEF 671
           D++K  LL   + A       + YT PL         DI         +   + R     
Sbjct: 592 DNQKVALLLLDQGASPHAAAKNGYT-PLHIAAKKNQMDIATSLLEYGADANAVTR----- 645

Query: 672 KGHCLLE-ACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIR 729
           +G   +  A ++G    V   L+ +  VN  +  +G TPLH A       R  + E L+ 
Sbjct: 646 QGIASVHLAAQEGHVDMVSLLLSRNANVNLSN-KSGLTPLHLAAQE---DRVNVAEVLVN 701

Query: 730 KGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQA 789
           +GAH++ + K    P+H+    G++ +++ LL+  AKVN     G TALH+ A+   T  
Sbjct: 702 QGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHI 761

Query: 790 VRVLLSHNA 798
           + VLL +NA
Sbjct: 762 INVLLQNNA 770

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.

Mus musculus (taxid: 10090)

>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 177/402 (44%), Gaps = 26/402 (6%)

Query: 406 ASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD 465
           AS  G   VV  L+    +I N +  +G   TPL+ AA  N + VV+YLL +GA+   + 
Sbjct: 104 ASLAGQAEVVKVLVKEGANI-NAQSQNG--FTPLYMAAQENHIDVVKYLLENGAN---QS 157

Query: 466 NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQT 525
            AT+  GFTPL  A Q+G  Q  A+L  + +     L  L  A +  D TK   L+    
Sbjct: 158 TATED-GFTPLAVALQQGHNQAVAILLENDTKGKVRLPALHIAARKDD-TKSAALLLQND 215

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
            NA D   +        +G  PLH A  YG+  V  +L+  GA V+       TPLH A+
Sbjct: 216 HNA-DVQSKMMVNRTTESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVAS 274

Query: 586 -------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGL 638
                   K LL  G  I+ K  DG T L  A     A    D   E LLE    +    
Sbjct: 275 KRGNTNMVKLLLDRGGQIDAKTRDGLTPLHCA-----ARSGHDQVVELLLERKAPLLART 329

Query: 639 HRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGH-CLLEACRQGDPSRVKKFLTSDVV 697
                PL     G    C K  L +   + D    +   L         RV K L     
Sbjct: 330 KNGLSPLHMAAQGDHVECVKHLLQYKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDKRA 389

Query: 698 NFK-HPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
           N       G TPLH A       R  ++E L++ GA +    +  L PIH+AA +GHL++
Sbjct: 390 NPNARALNGFTPLHIACKK---NRIKVMELLVKYGASIQAITESGLTPIHVAAFMGHLNI 446

Query: 757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           +  LL+ GA  ++ ++ G+TALH  AR  + + VR LL + A
Sbjct: 447 VLLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGA 488

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Mus musculus (taxid: 10090)

>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4

 Score =  117 bits (292), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 176/402 (43%), Gaps = 26/402 (6%)

Query: 406 ASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD 465
           AS  G   VV  L+    +I N +  +G   TPL+ AA  N + VV+YLL +GA+   + 
Sbjct: 104 ASLAGQAEVVKVLVKEGANI-NAQSQNG--FTPLYMAAQENHIDVVKYLLENGAN---QS 157

Query: 466 NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQT 525
            AT+  GFTPL  A Q+G  Q  A+L  + +     L  L  A +  D TK   L+    
Sbjct: 158 TATED-GFTPLAVALQQGHNQAVAILLENDTKGKVRLPALHIAARKDD-TKSAALLLQND 215

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
            NA D   +        +G  PLH A  YG+  V  +L+  GA V+       TPLH A+
Sbjct: 216 HNA-DVQSKMMVNRTTESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVAS 274

Query: 586 -------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGL 638
                   K LL  G  I+ K  DG T L  A     A    D   E LLE    +    
Sbjct: 275 KRGNTNMVKLLLDRGGQIDAKTRDGLTPLHCA-----ARSGHDQVVELLLERGAPLLART 329

Query: 639 HRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGH-CLLEACRQGDPSRVKKFLTSDVV 697
                PL     G    C K  L     + D    +   L         RV K L     
Sbjct: 330 KNGLSPLHMAAQGDHVECVKHLLQHKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDKRA 389

Query: 698 NFK-HPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
           N       G TPLH A       R  ++E L++ GA +    +  L PIH+AA +GHL++
Sbjct: 390 NPNARALNGFTPLHIACKK---NRIKVMELLVKYGASIQAITESGLTPIHVAAFMGHLNI 446

Query: 757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           +  LL+ GA  ++ ++ G+TALH  AR  + + VR LL + A
Sbjct: 447 VLLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGA 488

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Homo sapiens (taxid: 9606)

>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 172/611 (28%), Positives = 229/611 (37%), Gaps = 113/611 (18%)

Query: 210 AVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSE 269
           A   G   LH A   G  EV ++L+  GANVNA     FTPL+ AA ++ LEV   LL  
Sbjct: 103 ATKKGNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVKFLLDN 162

Query: 270 GADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFK 329
           GA                      Q L+ E     L  A +QG    V   L +D     
Sbjct: 163 GA---------------------SQSLATEDGFTPLAVALQQGHDQVVSLLLENDT---- 197

Query: 330 HPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGE----N 385
               G   LP  L I    DD    T A  +      + D     G+T L +A      N
Sbjct: 198 ---KGKVRLPA-LHIAARKDD----TKAAALLLQNDNNADVESKSGFTPLHIAAHYGNIN 249

Query: 386 SKKLLQEPPSVVDLESQ-----LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLH 440
              LL    + VD  ++     L  ASK G+  +V  LL     I + +  DG   TPLH
Sbjct: 250 VATLLLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKI-DAKTRDGL--TPLH 306

Query: 441 FAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL-----PLSP 495
             A      VVE LL   A + SK     K G +PLH A Q        LL     P+  
Sbjct: 307 CGARSGHEQVVEMLLDRAAPILSK----TKNGLSPLHMATQGDHLNCVQLLLQHNVPVD- 361

Query: 496 SAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFA-AGLVPLHNACSY 554
              ND L  L  A   G     K L++           +K+ P   A  G  PLH AC  
Sbjct: 362 DVTNDYLTALHVAAHCGHYKVAKVLLD-----------KKANPNAKALNGFTPLHIACKK 410

Query: 555 GHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTAL 607
              +V E+L+KHGA++        TP+H AA          L+ HGA  N  N  G+TAL
Sbjct: 411 NRIKVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETAL 470

Query: 608 DLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRI 667
            +                    AAR     + RY       D        K         
Sbjct: 471 HM--------------------AARSGQAEVVRYL----VQDGAQVEAKAK--------- 497

Query: 668 KDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESL 727
            D+   H    + R G    V++ L           +G TPLH +    +   + +   L
Sbjct: 498 DDQTPLHI---SARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGH---EDVAAFL 551

Query: 728 IRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKT 787
           +  GA L+   K+   P+H+AA  G L+V + LL+  A  +     G T LH  A  D  
Sbjct: 552 LDHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAHYDNQ 611

Query: 788 QAVRVLLSHNA 798
           +   +LL   A
Sbjct: 612 KVALLLLDQGA 622

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	1236
193621486	1166	PREDICTED: tankyrase-1-like [Acyrthosiph	0.739	0.783	0.398	0.0
417413341	1011	Putative ankyrin, partial [Desmodus rotu	0.706	0.863	0.398	0.0
417405709	1053	Putative ankyrin [Desmodus rotundus]	0.673	0.790	0.417	0.0
345322774	1172	PREDICTED: tankyrase-1 [Ornithorhynchus	0.725	0.765	0.373	1e-177
91076368	1166	PREDICTED: similar to tankyrase [Triboli	0.456	0.483	0.458	1e-159
270002551	1203	hypothetical protein TcasGA2_TC004859 [T	0.456	0.468	0.458	1e-159
242017239	1151	Tankyrase-1, putative [Pediculus humanus	0.459	0.493	0.454	1e-156
345490851	1219	PREDICTED: tankyrase-1-like [Nasonia vit	0.457	0.463	0.451	1e-154
312376647	1930	hypothetical protein AND_12459 [Anophele	0.457	0.292	0.450	1e-152
440895226	1336	Tankyrase-1 [Bos grunniens mutus]	0.707	0.654	0.346	1e-151

>gi|193621486|ref|XP_001950172.1| PREDICTED: tankyrase-1-like [Acyrthosiphon pisum]

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/1172 (39%), Positives = 597/1172 (50%), Gaps = 258/1172 (22%)

Query: 1    YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            +GR+D+VE LLA+GASI A DDGGLHPLHNACSFGH DVV LLLEA A+PNTRDNWN+TP
Sbjct: 66   FGRRDIVELLLAAGASIQAHDDGGLHPLHNACSFGHEDVVGLLLEAGADPNTRDNWNYTP 125

Query: 61   LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
            LHEAA KGK ++CI +                               L HGADP ++N E
Sbjct: 126  LHEAAVKGKIEICIAL-------------------------------LQHGADPTIRNSE 154

Query: 121  GQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS 180
             ++P+DL     V  + +  + ++       E++     ++ S+     NV+      ++
Sbjct: 155  NKSPIDLANVSGVPGINEVLVGEWR-KDEILESSRSGDDAKLSSLLTPLNVNC-----HA 208

Query: 181  GSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTEMLIKA 236
              G  S  L   +    +    +++  G  V      GLVPLHNACSYGH EVTEMLIK 
Sbjct: 209  SDGRKSTPLHLAAGFNRIRCVQLLLRHGSDVHAKDKGGLVPLHNACSYGHIEVTEMLIKH 268

Query: 237  GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRL 296
            GA VNAMDLWQFTPLHEAASKSR+EVCSLLLS+GADPTL NCHSKSAID+A TRELQ++L
Sbjct: 269  GACVNAMDLWQFTPLHEAASKSRVEVCSLLLSKGADPTLLNCHSKSAIDLASTRELQEKL 328

Query: 297  SNEFKGHCLLEACR-----------QGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLID 345
            S EFKG+CLLE+CR             D ++ K  LT D  N  H            +I+
Sbjct: 329  SYEFKGYCLLESCRTADVSKVKKLLSSDIAKFKHHLTGD--NAFHIVAASLGSKRKQVIE 386

Query: 346  LLS--------DDKEFIT---VAEE------MQATVR-EHRDNGQSG------------- 374
            LLS         +K+ +T   +A +      M+  +R   R N   G             
Sbjct: 387  LLSRKGAQINESNKDLLTPLHIAADYGHFDVMETFIRLGARVNATDGLGQTALHRCARND 446

Query: 375  ---------------------GYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMT 413
                                 G+ A+ +A +N KK+LQEPP V+DLES+LLEASK G++ 
Sbjct: 447  CLQGCKILLSYNIDTNITSIQGFKAIDMATDNIKKILQEPPVVLDLESELLEASKAGELD 506

Query: 414  VVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD-------- 465
             V R+L++ PHIVNCRDLDGRHSTPLHFAAGYNRVAV +YLL+HGADVH+KD        
Sbjct: 507  KVQRVLTAYPHIVNCRDLDGRHSTPLHFAAGYNRVAVCQYLLSHGADVHAKDKGGLVPLH 566

Query: 466  ---------------------NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRE 504
                                 N +D W FTPLHEAA KG+ ++              +R 
Sbjct: 567  NACSYGHFEVTDMLIQHGANVNVSDLWKFTPLHEAAAKGKYEI--------------VRL 612

Query: 505  LFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLV 564
            L +   G D TK  +  +      RD     +  L   A L+   +A   G     + L+
Sbjct: 613  LLQ--HGADDTKKNRDGHTPLGLVRDNDNEVADLLRGNAALL---DAAKKGILARVQRLL 667

Query: 565  KHGANVNVADLW--KFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTR 615
                N+N  D      TPLH AA       A+ LL+ GAD+   N   K  L   +P   
Sbjct: 668  T-SENINCRDTQGRNSTPLHLAAGYNNLEVAEFLLEQGADV---NAQDKGGL---IPLHN 720

Query: 616  AVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHC 675
            A   G       L+ A +    L ++   +  TD  W          F P          
Sbjct: 721  ASSYGH------LDLAAL----LIKHNTTVNATD-NWG---------FTP---------- 750

Query: 676  LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRK-GAHL 734
            L EA ++G        L      F     G TPL  A       R  + +++     A+ 
Sbjct: 751  LHEAAQKGRTQLSALLLAHGADPFLRNQEGQTPLELATAEDV--RSLLTDAMASHPSANS 808

Query: 735  NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
             E N     P      L   +    ++  GA V L    G T            +V    
Sbjct: 809  VENNASTYVPT--PPQLSPEETATVVMPSGASVALPSP-GGTGRSFMLGSQGDGSVNGYE 865

Query: 795  SHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRH 854
            S +   + ++L  +    ++L L+HL E+FEREQITLDILAEM HEDLKQ+G++AYGYRH
Sbjct: 866  SAHPHPNCITLSTVQGFLSSLCLEHLNEIFEREQITLDILAEMEHEDLKQIGITAYGYRH 925

Query: 855  KLLKGIEKL-------CSSPSFSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSG 907
            KL+KG+EKL       CS  S   P TLLIDLL +DKEFITV +E+Q+T+REHRDNGQSG
Sbjct: 926  KLIKGMEKLVSKHGGVCSGLSGGMPCTLLIDLLPEDKEFITVEQELQSTIREHRDNGQSG 985

Query: 908  GIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDE 967
            GIF+RYNI+RIQK+QNRKLW+RY+HR+ EV+ ENG QA+ERMLFHGSPFINAIVQKGFDE
Sbjct: 986  GIFNRYNIVRIQKIQNRKLWDRYIHRKREVSLENGNQANERMLFHGSPFINAIVQKGFDE 1045

Query: 968  RHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWL 1027
            RH                                           AYIGGMFGAG  ++ 
Sbjct: 1046 RH-------------------------------------------AYIGGMFGAG--IYF 1060

Query: 1028 GDVKQGVDQLSMAGGLETGTKKKKKNMYYGTL 1059
             +     +Q     G  TG    K    Y  L
Sbjct: 1061 AENSSKSNQYVYGIGGGTGCPSHKDRSCYQCL 1092

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|417413341|gb|JAA53005.1| Putative ankyrin, partial [Desmodus rotundus]

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/1143 (39%), Positives = 583/1143 (51%), Gaps = 270/1143 (23%)

Query: 1    YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            +GRKDVVEYLL +GA++ ARDDGGL PLHNACSFGHA+VV LLL   A+PN RDNWN+TP
Sbjct: 48   FGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLRHGADPNARDNWNYTP 107

Query: 61   LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
            LHEAA KGK DVCI +                               L HGA+P ++N +
Sbjct: 108  LHEAAIKGKIDVCIVL-------------------------------LQHGAEPTIRNTD 136

Query: 121  GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
            G+T LDL      +++L     +D + +   + +  +  ++  P    N +C        
Sbjct: 137  GRTALDLA-DPSAKAVLTGEYKKDELLESARSGNEEKMMALLTPL---NVNC-------- 184

Query: 176  PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
               ++  G  S  L   +    + +  +++  G  V       LVPLHNACSYGH+EVTE
Sbjct: 185  ---HASDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVPLHNACSYGHYEVTE 241

Query: 232  MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
            +L+K GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH+KSAID+APT +
Sbjct: 242  LLVKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSAIDLAPTPQ 301

Query: 292  LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDK 351
            L++RL+ EFKGH LL+A R+ D +R+KK L+ ++VNFKHP T +T L            K
Sbjct: 302  LKERLAYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALH-CAAASPYPKRK 360

Query: 352  EFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGD 411
            +   +     A + E          T L VA E +   + E                   
Sbjct: 361  QICELLLRKGANINEKTKEF----LTPLHVASEKAHNDVVE------------------- 397

Query: 412  MTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKW 471
              VV +      H      LD    T LH AA    +     LL++G D     N     
Sbjct: 398  --VVVK------HEAKVNALDNLGQTSLHRAAHCGHLQTCRLLLSYGCD----PNIISLQ 445

Query: 472  GFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT 531
            GFT L    +  +  L   +PL  S A+   R+L EA K GD+  VKKL   Q+VN RD 
Sbjct: 446  GFTALQMGNENVQQLLQEGIPLGNSEAD---RQLLEAAKAGDVETVKKLCTVQSVNCRDI 502

Query: 532  AGRKSTPLHFAAG------------------------LVPLHNACSYGHYEVTEMLVKHG 567
             GR+STPLHFAAG                        LVPLHNACSYGHYEV E+LVKHG
Sbjct: 503  EGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHG 562

Query: 568  ANVNVADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLAVPCTRAVLSG 620
            A VNVADLWKFTPLHEAAAK        LLQHGAD   KN DG T LDL       V  G
Sbjct: 563  AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL-------VKDG 615

Query: 621  DHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKG-HCLLEA 679
            D                          TDI                 +D  +G   LL+A
Sbjct: 616  D--------------------------TDI-----------------QDLLRGDSALLDA 632

Query: 680  CRQGDPSRVKKFLTSDVVNFKHPY-TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN 738
             ++G  +RVKK  + D VN +       TPLH A          + E L++ GA +N ++
Sbjct: 633  AKKGCLARVKKLSSPDNVNCRDTQGRHSTPLHLAAGY---NNLEVAEYLLQHGADVNAQD 689

Query: 739  KELLAPIHLAADLGHLD---------------------VLDTLLRLGAKVNLVDVLGQTA 777
            K  L P+H AA  G  D                     VL+ L   GA  + +     + 
Sbjct: 690  KGGLIPLHNAASYGADDVSALLTAAMPPSALPSCYKPQVLNGLRNPGATADALSSGPSSP 749

Query: 778  LHRTAR---DDKTQAVRVL---LSHNADTSIVSLL------VIFSCST---NLGLKHLLE 822
               +A    D+ + +   L   +S N      SL       V FS +    NLGL+HL++
Sbjct: 750  SSLSAASSLDNLSASFSELSSVVSSNGTEGASSLEKKEVPGVDFSITQFVRNLGLEHLMD 809

Query: 823  LFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQP---------G 873
            +FEREQITLD+L EM H++LK++G++AYG+RHKL+KG+E+L S      P         G
Sbjct: 810  IFEREQITLDVLVEMGHKELKEIGINAYGHRHKLIKGVERLISGQQGLNPYLTLNTSGSG 869

Query: 874  TLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHR 933
            T+LIDL   DKEF +V EEMQ+TVREHRD G +GGIF+RYNI++IQKV N+KLWERY HR
Sbjct: 870  TVLIDLSPGDKEFQSVEEEMQSTVREHRDGGHAGGIFNRYNILKIQKVCNKKLWERYTHR 929

Query: 934  RAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERML 993
            R EV++EN   A+ERMLFHGSPF+NAI+ KGFDER                         
Sbjct: 930  RKEVSEENHNHANERMLFHGSPFVNAIIHKGFDER------------------------- 964

Query: 994  FHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLETGTKKKKKN 1053
                              HAYIGGMFGAG  ++  +     +Q     G  TG    K  
Sbjct: 965  ------------------HAYIGGMFGAG--IYFAENSSKSNQYVYGIGGGTGCPVHKDR 1004

Query: 1054 MYY 1056
              Y
Sbjct: 1005 SCY 1007

Source: Desmodus rotundus

Species: Desmodus rotundus

Genus: Desmodus

Family: Phyllostomidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|417405709|gb|JAA49558.1| Putative ankyrin [Desmodus rotundus]

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/1057 (41%), Positives = 564/1057 (53%), Gaps = 225/1057 (21%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +GRKDVVEYLL +GA++ ARDDGGL PLHNACSFGHA+VV LLL   A+PN RDNWN+TP
Sbjct: 18  FGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFGHAEVVNLLLRHGADPNARDNWNYTP 77

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAA KGK DVCI +                               L HGA+P ++N +
Sbjct: 78  LHEAAIKGKIDVCIVL-------------------------------LQHGAEPTIRNTD 106

Query: 121 GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
           G+T LDL      +++L     +D + +   + +  +  ++  P    N +C        
Sbjct: 107 GRTALDLA-DPSAKAVLTGEYKKDELLESARSGNEEKMMALLTPL---NVNC-------- 154

Query: 176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
              ++  G  S  L   +    + +  +++  G  V       LVPLHNACSYGH+EVTE
Sbjct: 155 ---HASDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVPLHNACSYGHYEVTE 211

Query: 232 MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
           +L+K GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH+KSAID+APT +
Sbjct: 212 LLVKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSAIDLAPTPQ 271

Query: 292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDK 351
           L++RL+ EFKGH LL+A R+ D +R+KK L+ ++VNFKHP T +T L            K
Sbjct: 272 LKERLAYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALH-CAAASPYPKRK 330

Query: 352 EFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGD 411
           +   +     A + E          T L VA E +   + E                   
Sbjct: 331 QICELLLRKGANINEKTKEF----LTPLHVASEKAHNDVVE------------------- 367

Query: 412 MTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKW 471
             VV +      H      LD    T LH AA    +     LL++G D     N     
Sbjct: 368 --VVVK------HEAKVNALDNLGQTSLHRAAHCGHLQTCRLLLSYGCD----PNIISLQ 415

Query: 472 GFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT 531
           GFT L    +  +  L   +PL  S A+   R+L EA K GD+  VKKL   Q+VN RD 
Sbjct: 416 GFTALQMGNENVQQLLQEGIPLGNSEAD---RQLLEAAKAGDVETVKKLCTVQSVNCRDI 472

Query: 532 AGRKSTPLHFAAG------------------------LVPLHNACSYGHYEVTEMLVKHG 567
            GR+STPLHFAAG                        LVPLHNACSYGHYEV E+LVKHG
Sbjct: 473 EGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHG 532

Query: 568 ANVNVADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLAVPCTRAVLSG 620
           A VNVADLWKFTPLHEAAAK        LLQHGAD   KN DG T LDL       V  G
Sbjct: 533 AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL-------VKDG 585

Query: 621 DHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKG-HCLLEA 679
           D                          TDI                 +D  +G   LL+A
Sbjct: 586 D--------------------------TDI-----------------QDLLRGDSALLDA 602

Query: 680 CRQGDPSRVKKFLTSDVVNFKHPY-TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN 738
            ++G  +RVKK  + D VN +       TPLH A          + E L++ GA +N ++
Sbjct: 603 AKKGCLARVKKLSSPDNVNCRDTQGRHSTPLHLAAGY---NNLEVAEYLLQHGADVNAQD 659

Query: 739 KELLAPIHLAADLGHLD---------------------VLDTLLRLGAKVNLVDVLGQTA 777
           K  L P+H AA  G  D                     VL+ L   GA  + +     + 
Sbjct: 660 KGGLIPLHNAASYGADDVSALLTAAMPPSALPSCYKPQVLNGLRNPGATADALSSGPSSP 719

Query: 778 LHRTAR---DDKTQAVRVL---LSHNADTSIVSLL------VIFSCST---NLGLKHLLE 822
              +A    D+ + +   L   +S N      SL       V FS +    NLGL+HL++
Sbjct: 720 SSLSAASSLDNLSASFSELSSVVSSNGTEGASSLEKKEVPGVDFSITQFVRNLGLEHLMD 779

Query: 823 LFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQP---------G 873
           +FEREQITLD+L EM H++LK++G++AYG+RHKL+KG+E+L S      P         G
Sbjct: 780 IFEREQITLDVLVEMGHKELKEIGINAYGHRHKLIKGVERLISGQQGLNPYLTLNTSGSG 839

Query: 874 TLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHR 933
           T+LIDL   DKEF +V EEMQ+TVREHRD G +GGIF+RYNI++IQKV N+KLWERY HR
Sbjct: 840 TVLIDLSPGDKEFQSVEEEMQSTVREHRDGGHAGGIFNRYNILKIQKVCNKKLWERYTHR 899

Query: 934 RAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHA 970
           R EV++EN   A+ERMLFHGSPF+NAI+ KGFDERHA
Sbjct: 900 RKEVSEENHNHANERMLFHGSPFVNAIIHKGFDERHA 936

Source: Desmodus rotundus

Species: Desmodus rotundus

Genus: Desmodus

Family: Phyllostomidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|345322774|ref|XP_001508887.2| PREDICTED: tankyrase-1 [Ornithorhynchus anatinus]

 Score =  630 bits (1625), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 440/1177 (37%), Positives = 576/1177 (48%), Gaps = 280/1177 (23%)

Query: 1    YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            +GRKDVVE+LL  GA++HARDDGGL PLHNACSFGHA+VV LLL   A+PN RDNWN+TP
Sbjct: 71   FGRKDVVEHLLQMGANVHARDDGGLIPLHNACSFGHAEVVSLLLGQGADPNARDNWNYTP 130

Query: 61   LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
            LHEAA KGK DVCI +                               L HGADP ++N +
Sbjct: 131  LHEAAIKGKIDVCIVL-------------------------------LQHGADPNIRNTD 159

Query: 121  GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
            G++ LDL      +++L     +D + +   + +  +  ++  P    N +C        
Sbjct: 160  GKSALDL-ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPL---NVNC-------- 207

Query: 176  PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
               ++  G  S  L   +    + +  +++  G  V      GLVPLHNACSYGH+EVTE
Sbjct: 208  ---HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTE 264

Query: 232  MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
            +L+K GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH KSA+D+APT E
Sbjct: 265  LLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPE 324

Query: 292  LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDK 351
            L++RL+ EFKGH LL+A R+ D ++VKK L  +++NFK P + +T L    +  L    K
Sbjct: 325  LRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALH-CAVASLHPKRK 383

Query: 352  EFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGD 411
            +   +     A V E   +  +  + A + A  +  ++L +                   
Sbjct: 384  QVTELLLRKGANVNEKNKDFMTPVHVAAERAHNDVLEVLHK------------------- 424

Query: 412  MTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKW 471
                        H      LD    T LH AA    +     LL++G+D     +     
Sbjct: 425  ------------HGAKMNALDTLGQTALHRAALAGHLQTCRLLLSYGSD----PSIVSLQ 468

Query: 472  GFTPLHEAAQKGRTQLSALLPLS-PSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARD 530
            GFT    AAQ G   +  +L  S P   +D    L EA K GDL  VK+L +PQ VN RD
Sbjct: 469  GFT----AAQMGSEAVQQILSESTPMRTSDVDYRLLEASKAGDLETVKQLCSPQNVNCRD 524

Query: 531  TAGRKSTPLHFAAG------------------------LVPLHNACSYGHYEVTEMLVKH 566
              GR STPLHFAAG                        LVPLHNACSYGHYEV E+LV+H
Sbjct: 525  LEGRHSTPLHFAAGYNRVSVVEFLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRH 584

Query: 567  GANVNVADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLAVPCTRAVLS 619
            GA+VNVADLWKFTPLHEAAAK        LL+HGAD   KN DG T LDL       V  
Sbjct: 585  GASVNVADLWKFTPLHEAAAKGKYEICKLLLKHGADPTKKNRDGNTPLDL-------VKE 637

Query: 620  GDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEA 679
            GD   ++LL     +              D     C  +++ +  P        +C    
Sbjct: 638  GDTDIQDLLRGDAAL-------------LDAAKKGCLARVQKLCTPE-----NINCRDTQ 679

Query: 680  CRQGDPSRVKK-FLTSDVVNFKHPYTGDT---------PLHCAVTSPYPKRKAIVESLIR 729
             R   P  +   +   +V  +   +  D          PLH A +  +    A+   LI+
Sbjct: 680  GRNSTPLHLAAGYNNLEVAEYLLEHGADVNAQDKGGLIPLHNAASYGHVDIAAL---LIK 736

Query: 730  KGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDD---- 785
                +N  +K    P+H AA  G   +   LL  GA   + +  GQT L     DD    
Sbjct: 737  YNTCVNATDKWAFTPLHEAAQKGRTQLCALLLAHGADPTMKNQEGQTPLDLATADDIRAL 796

Query: 786  --------------KTQAVRVLLSHNADTSIVSLLVIFSCSTNL---------------- 815
                          K QA  V  S  + TS  S L   S   NL                
Sbjct: 797  LIDAMPPEALPTCFKPQATVVSASLISPTSTPSCLSAASSIDNLTGPLSELAVGGASNAG 856

Query: 816  ---------------------------GLKHLLELFEREQITLDILAEMNHEDLKQVGVS 848
                                       GL+HL ++FE EQITLD+LA+M HE+LK++G++
Sbjct: 857  DGAAGTERKEGDVTGLDMNISQFLKSLGLEHLRDIFETEQITLDVLADMGHEELKEIGIN 916

Query: 849  AYGYRHKLLKGIEKLCSSPSFSQP---------GTLLIDLLSDDKEFITVAEEMQATVRE 899
            AYG+RHKL+KG+E+L      + P         GT+L+DL  DDKE+ +V EEMQ+T+RE
Sbjct: 917  AYGHRHKLIKGVERLLGGQQGTNPYLTFHCVSQGTILLDLAPDDKEYQSVEEEMQSTIRE 976

Query: 900  HRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINA 959
            HRD G +GGIF+RYN+IRIQKV N+KL ER+ HR+ EV++EN    +ERMLFHGSPFINA
Sbjct: 977  HRDGGNAGGIFNRYNVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSPFINA 1036

Query: 960  IVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMF 1019
            I+ KGFDER                                           HAYIGGMF
Sbjct: 1037 IIHKGFDER-------------------------------------------HAYIGGMF 1053

Query: 1020 GAGKRVWLGDVKQGVDQLSMAGGLETGTKKKKKNMYY 1056
            GAG  ++  +     +Q     G  TG    K    Y
Sbjct: 1054 GAG--IYFAENSSKSNQYVYGIGGGTGCPTHKDRSCY 1088

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|91076368|ref|XP_967640.1| PREDICTED: similar to tankyrase [Tribolium castaneum]

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 351/765 (45%), Positives = 432/765 (56%), Gaps = 201/765 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           YGR+DVVE+LL++GASI ARDDGGLHPLHNACSFGHADVVRLLLEA ANPNTRDNWN+TP
Sbjct: 65  YGRRDVVEFLLSAGASIQARDDGGLHPLHNACSFGHADVVRLLLEAGANPNTRDNWNYTP 124

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAA KGK DVCI +                               L HGA+P + N E
Sbjct: 125 LHEAAIKGKVDVCIAL-------------------------------LQHGAEPDITNSE 153

Query: 121 GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
           G+TPLD+      R++L     +D + +   A  C     +       N +C        
Sbjct: 154 GKTPLDVA-DNSTRAVLTGEYRKDELLE---AARCGAEDKLLALLTPLNVNC-------- 201

Query: 176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
              ++  G  S  L   +      +  +++  G  V      GLVPLHNACSYGHFEVTE
Sbjct: 202 ---HASDGRRSTPLHLAAGYNRSRVVQLLLQHGADVHAKDKGGLVPLHNACSYGHFEVTE 258

Query: 232 MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
           MLIK GANVNA DLW FTPLHEAASKSRLEVCSLLLSEGADPT  NCHSKSAIDVAPTRE
Sbjct: 259 MLIKHGANVNANDLWAFTPLHEAASKSRLEVCSLLLSEGADPTQLNCHSKSAIDVAPTRE 318

Query: 292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT--------PLPG-TL 342
           LQ+RLS E++GH LL+AC+Q D +++KKFLTS+VVNFKHPYTGDT        P P    
Sbjct: 319 LQERLSCEYRGHQLLDACKQADTTKLKKFLTSEVVNFKHPYTGDTALHVAVNSPYPKRKQ 378

Query: 343 LIDLL--------SDDKEFIT---VAEE------MQATVRE---------------HR-- 368
           +I+LL          +K+F+T   +A +      M+  +R                HR  
Sbjct: 379 IIELLIRKGIHLNEKNKDFLTPLHLAADNSHLDLMEVLLRHGAKVNALDGLGQTALHRCT 438

Query: 369 --DNGQS----------------GGYTALQVAGENSKKLLQEPPSVV-DLESQLLEASKG 409
             DN Q+                 GYTA Q+AGEN++KL Q+PP+V  D+E Q+LEA+K 
Sbjct: 439 KDDNVQACRLLLSYNVDPSIVSLQGYTAAQLAGENAQKLFQDPPAVNGDVECQVLEAAKS 498

Query: 410 GDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD---- 465
           GD+  V RLL + P+ VNCRDLDGRHSTPLHFA+GYNRVAVVEYLL  GADVH+KD    
Sbjct: 499 GDLEQVQRLLETYPNTVNCRDLDGRHSTPLHFASGYNRVAVVEYLLEQGADVHAKDKGGL 558

Query: 466 -------------------------NATDKWGFTPLHEAAQKGRTQLSALL---PLSPSA 497
                                    N  D W FTPLHEA+ KG+ ++  LL      P+ 
Sbjct: 559 VPLHNACSYGHYEVTELLVKHGANVNVADLWKFTPLHEASAKGKYEIVKLLLKHGADPTK 618

Query: 498 AN-------DPLRE--------------LFEACKGGDLTKVKKLVNPQTVNARDTAGRKS 536
            N       D +RE              L +A K G+L ++++L+  + +N RD  GR S
Sbjct: 619 KNRDGATALDLVREGDQDVADLLRGNAALLDAAKKGNLARIQRLITAENINCRDVQGRNS 678

Query: 537 TPLHFAA------------------------GLVPLHNACSYGHYEVTEMLVKHGANVNV 572
           TPLH AA                        GL+PLHNA SYGH ++  +L+K+   VN 
Sbjct: 679 TPLHLAAGYNNVEVAEYLLEHGADVNAQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNA 738

Query: 573 ADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLA 610
            D W FTPLHEAA K        LL HGAD  LKN +G+T +DL+
Sbjct: 739 TDKWGFTPLHEAAQKGRTQLCALLLAHGADPFLKNQEGQTPMDLS 783

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002551|gb|EEZ98998.1| hypothetical protein TcasGA2_TC004859 [Tribolium castaneum]

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 351/765 (45%), Positives = 432/765 (56%), Gaps = 201/765 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           YGR+DVVE+LL++GASI ARDDGGLHPLHNACSFGHADVVRLLLEA ANPNTRDNWN+TP
Sbjct: 65  YGRRDVVEFLLSAGASIQARDDGGLHPLHNACSFGHADVVRLLLEAGANPNTRDNWNYTP 124

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAA KGK DVCI +                               L HGA+P + N E
Sbjct: 125 LHEAAIKGKVDVCIAL-------------------------------LQHGAEPDITNSE 153

Query: 121 GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
           G+TPLD+      R++L     +D + +   A  C     +       N +C        
Sbjct: 154 GKTPLDVA-DNSTRAVLTGEYRKDELLE---AARCGAEDKLLALLTPLNVNC-------- 201

Query: 176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
              ++  G  S  L   +      +  +++  G  V      GLVPLHNACSYGHFEVTE
Sbjct: 202 ---HASDGRRSTPLHLAAGYNRSRVVQLLLQHGADVHAKDKGGLVPLHNACSYGHFEVTE 258

Query: 232 MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
           MLIK GANVNA DLW FTPLHEAASKSRLEVCSLLLSEGADPT  NCHSKSAIDVAPTRE
Sbjct: 259 MLIKHGANVNANDLWAFTPLHEAASKSRLEVCSLLLSEGADPTQLNCHSKSAIDVAPTRE 318

Query: 292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT--------PLPG-TL 342
           LQ+RLS E++GH LL+AC+Q D +++KKFLTS+VVNFKHPYTGDT        P P    
Sbjct: 319 LQERLSCEYRGHQLLDACKQADTTKLKKFLTSEVVNFKHPYTGDTALHVAVNSPYPKRKQ 378

Query: 343 LIDLL--------SDDKEFIT---VAEE------MQATVRE---------------HR-- 368
           +I+LL          +K+F+T   +A +      M+  +R                HR  
Sbjct: 379 IIELLIRKGIHLNEKNKDFLTPLHLAADNSHLDLMEVLLRHGAKVNALDGLGQTALHRCT 438

Query: 369 --DNGQS----------------GGYTALQVAGENSKKLLQEPPSVV-DLESQLLEASKG 409
             DN Q+                 GYTA Q+AGEN++KL Q+PP+V  D+E Q+LEA+K 
Sbjct: 439 KDDNVQACRLLLSYNVDPSIVSLQGYTAAQLAGENAQKLFQDPPAVNGDVECQVLEAAKS 498

Query: 410 GDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD---- 465
           GD+  V RLL + P+ VNCRDLDGRHSTPLHFA+GYNRVAVVEYLL  GADVH+KD    
Sbjct: 499 GDLEQVQRLLETYPNTVNCRDLDGRHSTPLHFASGYNRVAVVEYLLEQGADVHAKDKGGL 558

Query: 466 -------------------------NATDKWGFTPLHEAAQKGRTQLSALL---PLSPSA 497
                                    N  D W FTPLHEA+ KG+ ++  LL      P+ 
Sbjct: 559 VPLHNACSYGHYEVTELLVKHGANVNVADLWKFTPLHEASAKGKYEIVKLLLKHGADPTK 618

Query: 498 AN-------DPLRE--------------LFEACKGGDLTKVKKLVNPQTVNARDTAGRKS 536
            N       D +RE              L +A K G+L ++++L+  + +N RD  GR S
Sbjct: 619 KNRDGATALDLVREGDQDVADLLRGNAALLDAAKKGNLARIQRLITAENINCRDVQGRNS 678

Query: 537 TPLHFAA------------------------GLVPLHNACSYGHYEVTEMLVKHGANVNV 572
           TPLH AA                        GL+PLHNA SYGH ++  +L+K+   VN 
Sbjct: 679 TPLHLAAGYNNVEVAEYLLEHGADVNAQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNA 738

Query: 573 ADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLA 610
            D W FTPLHEAA K        LL HGAD  LKN +G+T +DL+
Sbjct: 739 TDKWGFTPLHEAAQKGRTQLCALLLAHGADPFLKNQEGQTPMDLS 783

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017239|ref|XP_002429099.1| Tankyrase-1, putative [Pediculus humanus corporis] gi|212513963|gb|EEB16361.1| Tankyrase-1, putative [Pediculus humanus corporis]

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 345/759 (45%), Positives = 419/759 (55%), Gaps = 191/759 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           YGRK+VVE+LL++GASI ARDDGGLHPLHNACSFGHADVVRLLLEA ANPNTRDNW++TP
Sbjct: 65  YGRKEVVEFLLSTGASIQARDDGGLHPLHNACSFGHADVVRLLLEAGANPNTRDNWSYTP 124

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAA KGK DVCI +                               L +GADP ++N E
Sbjct: 125 LHEAAIKGKIDVCIAL-------------------------------LQNGADPSIRNSE 153

Query: 121 GQTPLDLTVAEDVRSLLQDAMAQ--YPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQ 178
           G+T L+L        L  D   +     A S +E   +   +   N +C           
Sbjct: 154 GKTALELADVSTRPVLTGDYKKEELLEAARSGSEDHLLTLLNPL-NVNC----------- 201

Query: 179 YSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTEMLI 234
           ++  G  S  L   +      +  +++ +G  V      GLVPLHNACSYGHFEVTEMLI
Sbjct: 202 HASDGRRSTPLHLAAGYNRGRVVQLLLKNGADVHAKDKGGLVPLHNACSYGHFEVTEMLI 261

Query: 235 KAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQ 294
           K GANVNAMDLWQFTPLHEAASKSR+EVCSLLLSEGADPT+ NCHSKS IDVAPTR+LQQ
Sbjct: 262 KHGANVNAMDLWQFTPLHEAASKSRVEVCSLLLSEGADPTIFNCHSKSPIDVAPTRDLQQ 321

Query: 295 RLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT--------PLPG------ 340
           +L +EFKGHCLLEACRQ DP+RVKK+L+S++VNFKH YTGDT        P P       
Sbjct: 322 KLIHEFKGHCLLEACRQTDPARVKKYLSSELVNFKHLYTGDTPLHCVAASPYPKRKQVLD 381

Query: 341 --------------TLLIDL-LSDDKEFITVAEEM---QATVREHRDNGQSG-------- 374
                          LL  L L+ DK    V + +    A V    D GQ+         
Sbjct: 382 SLIRKGANLNDKNKNLLTPLHLAADKSHYDVMDALLRHGAKVNALDDLGQTALHRCARDG 441

Query: 375 ---------------------GYTALQVAGENSKKLLQEPPS-VVDLESQLLEASKGGDM 412
                                G TA Q+  EN  K+LQ+P S   D E QLLEA+K GD+
Sbjct: 442 NIQACKILMSYNVDLSIVSLQGLTAAQLGTENVTKILQDPSSGSSDSECQLLEAAKSGDL 501

Query: 413 TVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD------- 465
             + RLLSS P IVNC+DLDGRHSTPLHFA+GYNRV++VEYLL HGADVH+KD       
Sbjct: 502 EAIQRLLSSYPQIVNCQDLDGRHSTPLHFASGYNRVSIVEYLLDHGADVHAKDKGGLVPL 561

Query: 466 ----------------------NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLR 503
                                 N  D W FTPLHEAA KG+ ++  LL    + A+   R
Sbjct: 562 HNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKGKYEIVRLLLKHGADASKKNR 621

Query: 504 E------------------------LFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPL 539
           +                        L +A K G++T+V++L++   +N RD  GR STPL
Sbjct: 622 DGSTPLDLVKEGDQDVADLLRGNVALLDAAKKGNVTRVQRLISSDNINCRDAQGRNSTPL 681

Query: 540 HFAAG------------------------LVPLHNACSYGHYEVTEMLVKHGANVNVADL 575
           H AAG                        L+PLHNA SYGH ++  +L+K+   VN  D 
Sbjct: 682 HLAAGYNNIEVAELLLEHGADVNAQDKGGLIPLHNASSYGHLDIAALLIKYHTAVNATDK 741

Query: 576 WKFTPLHEAAAKA---LLQHGADINLKNTDGKTALDLAV 611
           W FTPLHEAA K     L HGAD  LKN +G+T L+LA 
Sbjct: 742 WGFTPLHEAAQKEERNYLAHGADPFLKNQEGQTPLELAT 780

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490851|ref|XP_001607870.2| PREDICTED: tankyrase-1-like [Nasonia vitripennis]

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 345/764 (45%), Positives = 422/764 (55%), Gaps = 199/764 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           YGR+DVVEYLL +GASI ARDDGGLHPLHNACSFGH+DVVRLLLEA ANPNTRDNWN+TP
Sbjct: 67  YGRRDVVEYLLLAGASIQARDDGGLHPLHNACSFGHSDVVRLLLEAGANPNTRDNWNYTP 126

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAA KGK DVCI +                               L HGADP ++N E
Sbjct: 127 LHEAAIKGKIDVCIAL-------------------------------LQHGADPNIRNTE 155

Query: 121 GQTPLDL--TVAEDVRS--LLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPP 176
           G+T L+L  T  + V +    +D + +   + +      +  P    N +C         
Sbjct: 156 GKTALELADTATKPVLTGEYKKDELLEAARSGNEERLLQLLNPL---NVNC--------- 203

Query: 177 AQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTEM 232
             ++  G  S  L   +      +  +++ +G  V      GLVPLHNACSYGHFEVTE 
Sbjct: 204 --HASDGRRSTPLHLAAGYNRSRIVQILLQNGADVHAKDKGGLVPLHNACSYGHFEVTEA 261

Query: 233 LIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTREL 292
           L+K GA VNA DLW FTPLHEAASKSR EVCSLLLSEGADPT  NCHSKSAIDVAPT EL
Sbjct: 262 LLKHGAAVNASDLWAFTPLHEAASKSRAEVCSLLLSEGADPTQLNCHSKSAIDVAPTLEL 321

Query: 293 QQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGD--------TPLPG-TLL 343
           Q+RL+ E+KGHCLL+ACRQ DP+++KK+L+ +V NFKHPY+GD        +P P    +
Sbjct: 322 QERLAYEYKGHCLLDACRQADPAKLKKYLSPEVANFKHPYSGDTPLHCAAASPYPKRKQI 381

Query: 344 IDLL--------SDDKEFIT-----------------VAEEMQATVRE-------HR--- 368
           +++L          +K+F+T                 +A   +    +       HR   
Sbjct: 382 VEMLIRKNVALNEKNKDFLTPLHVATDHSHYDVMDVLLAHNAKVNALDGLGQTALHRCAR 441

Query: 369 -DNGQS----------------GGYTALQVAGENSKKLLQEPPS-VVDLESQLLEASKGG 410
            DN Q+                 GYTA QVA EN  K+LQ+PP+   D E+QLLEASK G
Sbjct: 442 EDNIQACRILLSYNVDQSIVSLQGYTAAQVATENVLKILQDPPNGSEDAEAQLLEASKSG 501

Query: 411 DMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD----- 465
           D+T V R+L + PH VNCRDLDGRHSTPLHFAAGYNRV VVEYLLAHGADVH+KD     
Sbjct: 502 DLTAVERILQANPHSVNCRDLDGRHSTPLHFAAGYNRVPVVEYLLAHGADVHAKDKGGLV 561

Query: 466 ------------------------NATDKWGFTPLHEAAQKGRTQLSALL---------- 491
                                   N  D W FTPLHEAA KG+ ++  LL          
Sbjct: 562 PLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKGKCEIVRLLLHHGADATKK 621

Query: 492 ------PLS-----PSAANDPLR---ELFEACKGGDLTKVKKLVNPQTVNARDTAGRKST 537
                 PL           D LR    L +A K G+L +V++LV    +N RD  GR ST
Sbjct: 622 NRDGATPLDLVRDGDQDVADLLRGNSALLDAAKKGNLARVQRLVTQDNINCRDAQGRNST 681

Query: 538 PLHFAAG------------------------LVPLHNACSYGHYEVTEMLVKHGANVNVA 573
           PLH AAG                        L+PLHNA SYGH ++  +L+K+   VN  
Sbjct: 682 PLHLAAGYNNLEVAEFLLERGADVNAQDKGGLIPLHNASSYGHLDIAALLIKYSTVVNAT 741

Query: 574 DLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLA 610
           D W FTPLHEAA K        LL HGAD  LKN +G++ +DLA
Sbjct: 742 DKWGFTPLHEAAQKGRTQLCALLLAHGADPFLKNQEGQSPVDLA 785

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312376647|gb|EFR23671.1| hypothetical protein AND_12459 [Anopheles darlingi]

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 345/766 (45%), Positives = 418/766 (54%), Gaps = 201/766 (26%)

Query: 1    YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            YGR+DVVE+LLASGASI ARDDGGLHPLHNACSFGHADVVRLLLEA ANPNTRDNWN+TP
Sbjct: 853  YGRRDVVEFLLASGASIQARDDGGLHPLHNACSFGHADVVRLLLEAGANPNTRDNWNYTP 912

Query: 61   LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
            LHEAA+KGK DVCI +                               L HGADP ++N E
Sbjct: 913  LHEAASKGKIDVCIAL-------------------------------LQHGADPNIRNSE 941

Query: 121  GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
             + PLDL      R +L     +D + +   + S      +  P    N +C        
Sbjct: 942  NKIPLDL-ADPCTRPVLTGEYRKDELLEAARSGSEDRLLELLTPL---NVNC-------- 989

Query: 176  PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
               ++  G  S  L   +    + +  +++  G  V      GLVPLHNACSYGHFEVTE
Sbjct: 990  ---HASDGRKSTPLHLAAGYNRIRVVQILLQHGADVHAKDKGGLVPLHNACSYGHFEVTE 1046

Query: 232  MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
            +LIK G NVNA DLW FTPLHEAASKSR+EVCSLLLSEGADPTL NCH+KSAID APTRE
Sbjct: 1047 LLIKHGGNVNANDLWAFTPLHEAASKSRIEVCSLLLSEGADPTLLNCHNKSAIDSAPTRE 1106

Query: 292  LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGT---------- 341
            LQ++++ E+KGH +LEACRQ D  R+KK LT++ VNF HPY GDTP+             
Sbjct: 1107 LQEKIAYEYKGHSVLEACRQADIQRLKKNLTTETVNFVHPYNGDTPVHAVAQSVYPKRKQ 1166

Query: 342  ---LLID----LLSDDKEFIT---VA------EEMQATVRE---------------HR-- 368
               +LI     L   +K+F+T   +A      E M   +R                HR  
Sbjct: 1167 VLEVLIRKGALLNEKNKDFLTPLHIAADNSHYELMDVLLRHGAKVDAIDGLGQTALHRCA 1226

Query: 369  --DNGQS----------GGYTALQ------VAGENSKKLLQEPPS-VVDLESQLLEASKG 409
              DN Q+           G  +LQ      +A EN  K+LQ+PPS  VDLE QLLEA+K 
Sbjct: 1227 REDNIQACRLLLSYGIDTGIVSLQGYTAAQLATENVLKILQDPPSDTVDLECQLLEAAKA 1286

Query: 410  GDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD---- 465
            GD+  V R++ S P  VNCRDLDGRHSTPLHFAAGYNRV VVE+LL HGA+VH+ D    
Sbjct: 1287 GDLDTVRRIILSSPMTVNCRDLDGRHSTPLHFAAGYNRVPVVEFLLEHGAEVHASDKGGL 1346

Query: 466  -------------------------NATDKWGFTPLHEAAQKGRTQLSALL--------- 491
                                     N  D W FTPLHEAA KG+ ++  LL         
Sbjct: 1347 VPLHNACSYGHYEVTELLVKHGANVNVADLWKFTPLHEAAAKGKYEIVKLLIKHGADVTK 1406

Query: 492  -------PLS-----PSAANDPLR---ELFEACKGGDLTKVKKLVNPQTVNARDTAGRKS 536
                   PL           D LR    L +A K G+L +V++LV    +N RD  GR S
Sbjct: 1407 KNRDGATPLDLVREGDQDVADLLRGNAALLDAAKKGNLARVQRLVTTDNINCRDAQGRNS 1466

Query: 537  TPLHFAA------------------------GLVPLHNACSYGHYEVTEMLVKHGANVNV 572
            TPLH AA                        GL+PLHNA SYGH ++  +L+KH   VN 
Sbjct: 1467 TPLHLAAGYNNLEVAEYLLEHGADVNAQDKGGLIPLHNASSYGHLDIAALLIKHNTVVNA 1526

Query: 573  ADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLAV 611
             D W +TPLHEAA K        LL HGAD  +KN +G+T+LDLA 
Sbjct: 1527 TDKWGYTPLHEAAQKGRTQLCSLLLAHGADPFMKNQEGQTSLDLAT 1572

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|440895226|gb|ELR47482.1| Tankyrase-1 [Bos grunniens mutus]

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 418/1208 (34%), Positives = 557/1208 (46%), Gaps = 333/1208 (27%)

Query: 1    YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            +GRKDVVE+LL  GA++HARDDGGL PLHNACSFGHA+VV LLL   A+PN RDNWN+TP
Sbjct: 226  FGRKDVVEHLLQMGANVHARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYTP 285

Query: 61   LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
            LHEAA KGK DVCI +                               L HGADP ++N +
Sbjct: 286  LHEAAIKGKIDVCIVL-------------------------------LQHGADPNIRNTD 314

Query: 121  GQTPLDLTVAEDVRSLL-----QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
            G++ LDL      +++L     +D + +   + +  +  ++  P    N +C        
Sbjct: 315  GKSALDL-ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPL---NVNC-------- 362

Query: 176  PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTE 231
               ++  G  S  L   +    + +  +++  G  V      GLVPLHNACSYGH+EVTE
Sbjct: 363  ---HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTE 419

Query: 232  MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
            +L+K GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH KSA+D+APT E
Sbjct: 420  LLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPE 479

Query: 292  LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDK 351
            L++RL+ EFKGH LL+A R+ D ++VKK L  +++NFK P + +T L    +  L    K
Sbjct: 480  LRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETAL-HCAVASLHPKRK 538

Query: 352  EFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGD 411
            +   +     A V E   +      T L VA E +   +                     
Sbjct: 539  QVTELLLRKGANVNEKNKDFM----TPLHVAAERAHNDV--------------------- 573

Query: 412  MTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKW 471
            M V+ +      H      LD    T LH AA    +     LL++G+D     +     
Sbjct: 574  MEVLHK------HGAKMNALDTLGQTALHRAALAGHLQTCRLLLSYGSD----PSIISLQ 623

Query: 472  GFTPLHEAAQKGRTQLSALLPLS-PSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARD 530
            GFT    AAQ G   +  +L  S P   +D    L EA K GDL  VK+L +PQ VN RD
Sbjct: 624  GFT----AAQMGNEAVQQILSESTPIRTSDVDYRLLEASKAGDLETVKQLCSPQNVNCRD 679

Query: 531  TAGRKSTPLHFAAG------------------------LVPLHNACSYGH---------- 556
              GR STPLHFAAG                        LVPLHNACSYGH          
Sbjct: 680  LEGRHSTPLHFAAGYNRVSVVEYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRH 739

Query: 557  -----------------------YEVTEMLVKHGA------------------------- 568
                                   YE+ ++L+KHGA                         
Sbjct: 740  GASVNVADLWKFTPLHEAAAKGKYEICKLLLKHGADPTKKNRDGNTPLDLVKEGDTDIQD 799

Query: 569  ---------------------------NVNVADLW--KFTPLHEAA-------AKALLQH 592
                                       N+N  D      TPLH AA       A+ LL+H
Sbjct: 800  LLRGDAALLDAAKKGCLARVQKLCTPENINCRDTQGRNSTPLHLAAGYNNLEVAEYLLEH 859

Query: 593  GADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGW 652
            GAD+N ++  G       +P   A   G      LL           +Y   +  TD  W
Sbjct: 860  GADVNAQDKGG------LIPLHNAASYGHVDIAALLI----------KYNTCVNATD-KW 902

Query: 653  CSCCCKMELMFMPRIKDEFKGH---CLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPL 709
                      F P  +   KG    C L      DP+   +              G TPL
Sbjct: 903  A---------FTPLHEAAQKGRTQLCALLLAHGADPTMKNQ-------------EGQTPL 940

Query: 710  HCAVTSPYPKRKAIVESLIRKGAHLNEK------NKELLAPIHLAADLGHLDVLDTL--- 760
              A       R  +++++  +      K      +  L++P    + L     +D L   
Sbjct: 941  DLATADDI--RALLIDAMPPEALPTCFKPQATVVSASLISPASTPSCLSAASSIDNLTGP 998

Query: 761  ---LRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGL 817
               L +G   N  D  G     R   + K  A R  ++   D +I   L       +LGL
Sbjct: 999  LAELAVGGASNTGD--GAAGAERKEGEGKYTAERPFVA-GLDMNISQFL------KSLGL 1049

Query: 818  KHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQP----- 872
            +HL ++FE EQITLD+LA+M HE+LK++G++AYG+RHKL+KG+E+L      + P     
Sbjct: 1050 EHLRDIFETEQITLDVLADMGHEELKEIGINAYGHRHKLIKGVERLLGGQQGTNPYLTFH 1109

Query: 873  ----GTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWE 928
                GT+L+DL  +DKE+ +V EEMQ+T+REHRD G +GG+F+RYN+IRIQKV N KL  
Sbjct: 1110 CVNQGTILLDLAPEDKEYQSVEEEMQSTIREHRDGGNAGGVFNRYNVIRIQKVVNTKLRA 1169

Query: 929  RYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQA 988
            R+ HR+ EV++EN    +ERMLFHGSPFINAI+ KGFDER                    
Sbjct: 1170 RFCHRQKEVSEENHNHHNERMLFHGSPFINAIIHKGFDER-------------------- 1209

Query: 989  HERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLETGTK 1048
                                   HAYIGGMFGAG  ++  +     +Q     G  TG  
Sbjct: 1210 -----------------------HAYIGGMFGAG--IYFAENSSKSNQYVYGIGGGTGCP 1244

Query: 1049 KKKKNMYY 1056
              K    Y
Sbjct: 1245 THKDRSCY 1252

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	1236
FB|FBgn0027508	1181	tankyrase "tankyrase" [Drosoph	0.124	0.130	0.751	7.1e-201
ZFIN|ZDB-GENE-030131-4865	1267	si:ch211-155m12.3 "si:ch211-15	0.252	0.246	0.413	2e-188
UNIPROTKB|E1BMY0	1149	TNKS2 "Uncharacterized protein	0.298	0.321	0.452	1.9e-186
UNIPROTKB|F1P1N0	1269	TNKS "Uncharacterized protein"	0.252	0.245	0.406	2e-186
MGI|MGI:1921743	1166	Tnks2 "tankyrase, TRF1-interac	0.449	0.476	0.389	8.1e-172
UNIPROTKB|F1P4A9	1167	TNKS2 "Uncharacterized protein	0.446	0.473	0.384	9.8e-172
RGD|1305026	1166	Tnks2 "tankyrase, TRF1-interac	0.449	0.476	0.387	4e-170
UNIPROTKB|F6Y5Y4	1151	TNKS2 "Uncharacterized protein	0.450	0.483	0.381	6.1e-170
UNIPROTKB|F1SCW9	1166	TNKS2 "Uncharacterized protein	0.450	0.477	0.381	9.6e-170
UNIPROTKB|Q9H2K2	1166	TNKS2 "Tankyrase-2" [Homo sapi	0.450	0.477	0.381	9.6e-170

FB|FBgn0027508 tankyrase "tankyrase" [Drosophila melanogaster (taxid:7227)]

 Score = 615 (221.5 bits), Expect = 7.1e-201, Sum P(6) = 7.1e-201
 Identities = 118/157 (75%), Positives = 135/157 (85%)

Query:   817 LKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQPG--- 873
             L HL+ELFEREQITLDILAEM H+DLKQVGVSAYG+RHK+LKGI +L S+          
Sbjct:   903 LHHLIELFEREQITLDILAEMGHDDLKQVGVSAYGFRHKILKGIAQLRSTTGIGNNVNLC 962

Query:   874 TLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHR 933
             TLL+DLL DDKEF+ V EEMQAT+REHRDNGQ+GG F+RYNIIR+QKVQNRKLWERY HR
Sbjct:   963 TLLVDLLPDDKEFVAVEEEMQATIREHRDNGQAGGYFTRYNIIRVQKVQNRKLWERYAHR 1022

Query:   934 RAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHA 970
             R E+A+EN  Q++ERMLFHGSPFINAIVQ+GFDERHA
Sbjct:  1023 RQEIAEENFLQSNERMLFHGSPFINAIVQRGFDERHA 1059

GO:0007016 "cytoskeletal anchoring at plasma membrane" evidence=ISS

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

GO:0035220 "wing disc development" evidence=IGI

GO:0022416 "chaeta development" evidence=IGI

ZFIN|ZDB-GENE-030131-4865 si:ch211-155m12.3 "si:ch211-155m12.3" [Danio rerio (taxid:7955)]

 Score = 568 (205.0 bits), Expect = 2.0e-188, Sum P(6) = 2.0e-188
 Identities = 141/341 (41%), Positives = 195/341 (57%)

Query:    11 LASGASIHARDDGGLH--PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKG 68
             L    +++A+D  G    PLH A  FG  DVV  LL+  AN ++RD+    PLH A + G
Sbjct:   143 LVDSVNVNAKDMAGRKSTPLHFAAGFGRKDVVEHLLQTGANVHSRDDGGLIPLHNACSFG 202

Query:    69 KTDV-----CIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCY--LAHGADPFLKNQEG 121
               +V     C G   A+ +++ N     +         K   C   L HGADP ++N +G
Sbjct:   203 HAEVVSLLLCSG---ADPNARDNWNYTPLH--EAAIKGKIDVCIVLLQHGADPNIRNTDG 257

Query:   122 QTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSG 181
             ++ LDL      +++L     +Y       E A      +        NV+      ++ 
Sbjct:   258 KSALDLA-DPSAKTVLT---GEYK-KDELLEAARSGNEEKLMALLTPLNVNC-----HAS 307

Query:   182 SGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTEMLIKAG 237
              G  S  L   +    + +  +++  G  V      GLVPLHNACSYGH+EVTE+L+K G
Sbjct:   308 DGRKSTPLHLAAGYNRVRIVQLLLQYGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHG 367

Query:   238 ANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLS 297
             A VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH KSA+DVAPT EL++RL+
Sbjct:   368 ACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLLNCHGKSAVDVAPTPELKERLT 427

Query:   298 NEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPL 338
              EFKGH LL+A R+ D ++VKK    ++++FKHP++ D+ L
Sbjct:   428 YEFKGHSLLQAAREADMAKVKK-TAQEIISFKHPHSHDSAL 467

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

UNIPROTKB|E1BMY0 TNKS2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 707 (253.9 bits), Expect = 1.9e-186, Sum P(5) = 1.9e-186
 Identities = 187/413 (45%), Positives = 236/413 (57%)

Query:   215 LVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPT 274
             LVPLHNACSYGH+EVTE+L+K GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPT
Sbjct:   228 LVPLHNACSYGHYEVTELLVKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYGADPT 287

Query:   275 LHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTG 334
             L NCH+KSAID+APT +L++RL+ EFKGH LL+A R+ D +R+KK L+ ++VNFKHP T 
Sbjct:   288 LLNCHNKSAIDLAPTPQLKERLAYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTH 347

Query:   335 DTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPP 394
             +T L            K+   +     A + E          T L VA E +   + E  
Sbjct:   348 ETALH-CAAASPYPKRKQICELLLRKGANINEKTKEF----LTPLHVASEKAHNDVVEV- 401

Query:   395 SVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTP-LHFAAGYNRVAV--- 450
              VV  E+++      G  T + R  + C H+  CR L      P +    G+  + +   
Sbjct:   402 -VVKHEAKVNALDNLGQ-TSLHRA-AHCGHLQTCRLLLSYGCDPNIISLQGFTALQMGNE 458

Query:   451 -VEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG--RTQXXXXXXXXXXXXXXXXRE--- 504
              V+ LL  G  + + +   D+     L EAA+ G   T                 R+   
Sbjct:   459 NVQQLLQEGIPLGNSE--ADR----QLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTP 512

Query:   505 LFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEML 563
             L  A     ++ V+ L+ +   V+A+D  G           LVPLHNACSYGHYEV E+L
Sbjct:   513 LHFAAGYNRVSVVEYLLQHGADVHAKDKGG-----------LVPLHNACSYGHYEVAELL 561

Query:   564 VKHGANVNVADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDL 609
             VKHGA VNVADLWKFTPLHEAAAK        LLQHGAD   KN DG T LDL
Sbjct:   562 VKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL 614

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0070213 "protein auto-ADP-ribosylation" evidence=IEA

GO:0070198 "protein localization to chromosome, telomeric region" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0040014 "regulation of multicellular organism growth" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

GO:0000242 "pericentriolar material" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

UNIPROTKB|F1P1N0 TNKS "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 568 (205.0 bits), Expect = 2.0e-186, Sum P(6) = 2.0e-186
 Identities = 139/342 (40%), Positives = 194/342 (56%)

Query:    11 LASGASIHARDDGGLH--PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKG 68
             L    +++A+D  G    PLH A  FG  DVV  LL+  AN + RD+    PLH A + G
Sbjct:   143 LVDAGNVNAKDMAGRKSTPLHFAAGFGRKDVVEHLLQTGANVHARDDGGLIPLHNACSFG 202

Query:    69 KTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH------KDRSCY--LAHGADPFLKNQE 120
               +V + +   + +  + +  +        P+H      K   C   L HGADP ++N +
Sbjct:   203 HAEV-VSLLLCQGADPNARDNWNY-----TPLHEAAIKGKIDVCIVLLQHGADPNIRNTD 256

Query:   121 GQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS 180
             G++ LDL      +++L     +Y       E A      +        NV+      ++
Sbjct:   257 GKSALDLA-DPSAKAVLT---GEYK-KDELLEAARSGNEEKLMALLTPLNVNC-----HA 306

Query:   181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTEMLIKA 236
               G  S  L   +    + +  +++  G  V      GLVPLHNACSYGH+EVTE+L+K 
Sbjct:   307 SDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKH 366

Query:   237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRL 296
             GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH KSA+D+APT EL++RL
Sbjct:   367 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERL 426

Query:   297 SNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPL 338
             + EFKGH LL+A R+ D ++VKK L  +++NFK P + +T L
Sbjct:   427 TYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETAL 468

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0000784 "nuclear chromosome, telomeric region" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0032212 "positive regulation of telomere maintenance via telomerase" evidence=IEA

GO:0043392 "negative regulation of DNA binding" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0070198 "protein localization to chromosome, telomeric region" evidence=IEA

GO:0070212 "protein poly-ADP-ribosylation" evidence=IEA

GO:0070213 "protein auto-ADP-ribosylation" evidence=IEA

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

MGI|MGI:1921743 Tnks2 "tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2" [Mus musculus (taxid:10090)]

 Score = 812 (290.9 bits), Expect = 8.1e-172, Sum P(4) = 8.1e-172
 Identities = 246/632 (38%), Positives = 324/632 (51%)

Query:    11 LASGASIHARDDGGLH--PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKG 68
             L +   +++RD  G    PLH A  FG  DVV  LL+  AN   RD+    PLH A + G
Sbjct:    43 LVTPEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFG 102

Query:    69 KTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH------KDRSCY--LAHGADPFLKNQE 120
               +V + +   +H +  N            P+H      K   C   L HGA+P ++N +
Sbjct:   103 HAEV-VNLLL-QHGADPNAR----DNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTD 156

Query:   121 GQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS 180
             G+T LDL      +++L      Y       E+A      +        NV+      ++
Sbjct:   157 GRTALDLA-DPSAKAVLT---GDYK-KDELLESARSGNEEKMMALLTPLNVNC-----HA 206

Query:   181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL---G-LVPLHNACSYGHFEVTEMLIKA 236
               G  S  L   +    + +  +++  G  V     G LVPLHNACSYGH+EVTE+L+K 
Sbjct:   207 SDGRKSTPLHLAAGYNRVKIVQLLLHHGADVHAKDKGDLVPLHNACSYGHYEVTELLVKH 266

Query:   237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRL 296
             GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH+KSAID+APT +L++RL
Sbjct:   267 GACVNAMDLWQFTPLHEAASKNRIEVCSLLLSYGADPTLLNCHNKSAIDLAPTAQLKERL 326

Query:   297 SNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITV 356
             S EFKGH LL+A R+ D +R+KK L+ ++VNFKHP T +T L            K+   +
Sbjct:   327 SYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALH-CAAASPYPKRKQICEL 385

Query:   357 AEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVT 416
                  A   E          T L VA EN+   + E   VV  E+++      G  T + 
Sbjct:   386 LLRKGANTNEKTKEF----LTPLHVASENAHNDVVEV--VVKHEAKVNALDSLGQ-TSLH 438

Query:   417 RLLSSCPHIVNCRDLDGRHSTP-LHFAAGYNRVAV----VEYLLAHGADV-HSKDNATDK 470
             R  + C H+  CR L      P +    G+  + +    V+ LL  GA + HS+    D+
Sbjct:   439 RA-AHCGHLQTCRLLLSYGCDPNIISLQGFTALQMGNENVQQLLQEGASLGHSE---ADR 494

Query:   471 WGFTPLHEAAQKG--RTQXXXXXXXXXXXXXXXXRE---LFEACKGGDLTKVKKLV-NPQ 524
                  L EAA+ G   T                 R+   L  A     ++ V+ L+ +  
Sbjct:   495 ----QLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA 550

Query:   525 TVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA 584
              V+A+D  G           LVPLHNACSYGHYEV E+LVKHGA VNVADLWKFTPLHEA
Sbjct:   551 DVHAKDKGG-----------LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEA 599

Query:   585 AAKA-------LLQHGADINLKNTDGKTALDL 609
             AAK        LLQHGAD   KN DG T LDL
Sbjct:   600 AAKGKYEICKLLLQHGADPTKKNRDGNTPLDL 631

GO:0000209 "protein polyubiquitination" evidence=ISO

GO:0000242 "pericentriolar material" evidence=ISO

GO:0000723 "telomere maintenance" evidence=ISS;IMP

GO:0000781 "chromosome, telomeric region" evidence=IEA

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005635 "nuclear envelope" evidence=ISO

GO:0005694 "chromosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006471 "protein ADP-ribosylation" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0019899 "enzyme binding" evidence=ISO

GO:0035264 "multicellular organism growth" evidence=IMP

GO:0040014 "regulation of multicellular organism growth" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0070198 "protein localization to chromosome, telomeric region" evidence=ISO

GO:0070213 "protein auto-ADP-ribosylation" evidence=ISO

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=ISO

UNIPROTKB|F1P4A9 TNKS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 809 (289.8 bits), Expect = 9.8e-172, Sum P(4) = 9.8e-172
 Identities = 241/626 (38%), Positives = 325/626 (51%)

Query:    16 SIHARDDGGLH--PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVC 73
             ++++RD  G    PLH A  FG  DVV  LL++ AN + RD+    PLH A + G  +V 
Sbjct:    49 NVNSRDTAGRKSSPLHFAAGFGRKDVVEYLLQSGANVHARDDGGLIPLHNACSFGHAEV- 107

Query:    74 IGIYFAEHSSKSNQYVYGIGGGTGCPMH----KDRS--CY--LAHGADPFLKNQEGQTPL 125
             + +    H +  N            P+H    K ++  C   L HGA+P ++N +G+T L
Sbjct:   108 VNLLL-RHGADPNAR----DNWNYTPLHEAAIKGKTDVCIVLLQHGAEPTIRNTDGRTAL 162

Query:   126 DLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGD 185
             DL      +++L     +Y       E+A      +  +     NV+      ++  G  
Sbjct:   163 DLA-DPSAKAVLT---GEYK-KDELLESARSGNEEKMMSLLTPLNVNC-----HASDGRK 212

Query:   186 SVSLPPTSPPQPLALETVIMPSGQAVAL---G-LVPLHNACSYGHFEVTEMLIKAGANVN 241
             S  L   +    + +  +++  G  V     G LVPLHNACSYGH+EVTE+L+K GA VN
Sbjct:   213 STPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVPLHNACSYGHYEVTELLVKHGACVN 272

Query:   242 AMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFK 301
             AMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH+KS ID+APT +L++RL+ EFK
Sbjct:   273 AMDLWQFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSTIDLAPTPQLKERLAYEFK 332

Query:   302 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQ 361
             GH LL+A R+ D +R+KK L+ + VNFKHP T +T L            K+   +     
Sbjct:   333 GHSLLQAARESDVARIKKHLSLETVNFKHPQTHETALH-CAAASPYPKRKQVCELLLRKG 391

Query:   362 ATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSS 421
             A + E   N      T L VA E +   + E   VV  E+++      G  T + R  + 
Sbjct:   392 ANINEKTKNF----LTPLHVASEKAHNDVVEV--VVKHEAKVNALDNLGQ-TSLHRA-AH 443

Query:   422 CPHIVNCRDLDGRHSTP-LHFAAGYNRVAV----VEYLLAHGADVHSKDNATDKWGFTPL 476
             C H+  CR L      P +    G+  + +    V+ LL  G  + + D   D+     L
Sbjct:   444 CGHLQTCRLLLSSGCDPSIVSLQGFTALQMGNESVQQLLQEGIPLGNSD--ADR----QL 497

Query:   477 HEAAQKGR--TQXXXXXXXXXXXXXXXXRE---LFEACKGGDLTKVKKLV-NPQTVNARD 530
              EAA+ G   T                 R+   L  A     ++ V+ L+ +   V+A+D
Sbjct:   498 LEAAKAGDVDTVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKD 557

Query:   531 TAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-- 588
               G           LVPLHNACSYGHYEV E+LVKHGA VNVADLWKFTPLHEAAAK   
Sbjct:   558 KGG-----------LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKY 606

Query:   589 -----LLQHGADINLKNTDGKTALDL 609
                  LLQHGAD   KN DG T LDL
Sbjct:   607 EICKLLLQHGADPTKKNRDGNTPLDL 632

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0000242 "pericentriolar material" evidence=IEA

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0040014 "regulation of multicellular organism growth" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0070198 "protein localization to chromosome, telomeric region" evidence=IEA

GO:0070213 "protein auto-ADP-ribosylation" evidence=IEA

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

RGD|1305026 Tnks2 "tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2" [Rattus norvegicus (taxid:10116)]

 Score = 804 (288.1 bits), Expect = 4.0e-170, Sum P(4) = 4.0e-170
 Identities = 245/632 (38%), Positives = 322/632 (50%)

Query:    11 LASGASIHARDDGGLH--PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKG 68
             L +   +++RD  G    PLH A  FG  DVV  LL+  AN   RD+    PLH A + G
Sbjct:    43 LVTPEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFG 102

Query:    69 KTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH------KDRSCY--LAHGADPFLKNQE 120
               +V + +   +H +  N            P+H      K   C   L HGA+P ++N +
Sbjct:   103 HAEV-VNLLL-QHGADPNAR----DNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTD 156

Query:   121 GQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS 180
             G+T LDL      +++L      Y       E+A      +        NV+      ++
Sbjct:   157 GRTALDLA-DPSAKAVLT---GDYK-KDELLESARSGNEEKMMALLTPLNVNC-----HA 206

Query:   181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL---G-LVPLHNACSYGHFEVTEMLIKA 236
               G  S  L   +    + +  +++  G  V     G LVPLHNACSYGH+EVTE+L+K 
Sbjct:   207 SDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVPLHNACSYGHYEVTELLVKH 266

Query:   237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRL 296
             GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH+KSAID+APT +L++RL
Sbjct:   267 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSAIDLAPTAQLKERL 326

Query:   297 SNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITV 356
             S EFKGH LL+A R+ D +R+KK L+ ++VNFKHP T +T L            K+   +
Sbjct:   327 SYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALH-CAAASPYPKRKQICEL 385

Query:   357 AEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVT 416
                  A   E          T L VA EN+   + E   VV  E+++      G  T + 
Sbjct:   386 LLRKGANTNEKTKEF----LTPLHVASENAHNDVVEV--VVKHEAKVNALDSLGQ-TSLH 438

Query:   417 RLLSSCPHIVNCRDLDGRHSTP-LHFAAGYNRVAV----VEYLLAHGADV-HSKDNATDK 470
             R  + C H+  CR L      P +    G   + +    V+ LL  G  + HS+    D+
Sbjct:   439 RA-AHCGHLQTCRLLLSYGCDPNIISLQGLTALQMGNENVQQLLQEGVSLGHSE---ADR 494

Query:   471 WGFTPLHEAAQKG--RTQXXXXXXXXXXXXXXXXRE---LFEACKGGDLTKVKKLV-NPQ 524
                  L EAA+ G   T                 R+   L  A     ++ V+ L+ +  
Sbjct:   495 ----QLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA 550

Query:   525 TVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA 584
              V+A+D  G           LVPLHNACSYGHYEV E+LVKHGA VNVADLWKFTPLHEA
Sbjct:   551 DVHAKDKGG-----------LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEA 599

Query:   585 AAKA-------LLQHGADINLKNTDGKTALDL 609
             AAK        LLQHGAD   KN DG T LDL
Sbjct:   600 AAKGKYEICKLLLQHGADPTKKNRDGNTPLDL 631

GO:0000209 "protein polyubiquitination" evidence=ISO

GO:0000242 "pericentriolar material" evidence=ISO

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005635 "nuclear envelope" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006471 "protein ADP-ribosylation" evidence=ISO

GO:0019899 "enzyme binding" evidence=ISO

GO:0035264 "multicellular organism growth" evidence=ISO

GO:0040014 "regulation of multicellular organism growth" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0070198 "protein localization to chromosome, telomeric region" evidence=ISO

GO:0070213 "protein auto-ADP-ribosylation" evidence=ISO

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=ISO

GO:0000723 "telomere maintenance" evidence=ISO

UNIPROTKB|F6Y5Y4 TNKS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 797 (285.6 bits), Expect = 6.1e-170, Sum P(4) = 6.1e-170
 Identities = 241/631 (38%), Positives = 322/631 (51%)

Query:    11 LASGASIHARDDGGLH--PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKG 68
             L +   +++RD  G    PLH A  FG  DVV  LL+  AN   RD+    PLH A + G
Sbjct:    18 LVTPEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFG 77

Query:    69 KTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH------KDRSCY--LAHGADPFLKNQE 120
               +V + +    H +  N            P+H      K   C   L HGA+P ++N +
Sbjct:    78 HAEV-VSLLL-RHGADPNAR----DNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTD 131

Query:   121 GQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS 180
             G+T LDL      +++L     +Y       E+A      +        NV+      ++
Sbjct:   132 GRTALDLA-DPSAKAVLT---GEYK-KDELLESARNGNEEKMMALLTPLNVNC-----HA 181

Query:   181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL---G-LVPLHNACSYGHFEVTEMLIKA 236
               G  S  L   +    + +  +++  G  V     G LVPLHNACSYGH+EVTE+L+K 
Sbjct:   182 SDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVPLHNACSYGHYEVTELLVKH 241

Query:   237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRL 296
             GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH+KSAID+APT +L++RL
Sbjct:   242 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSAIDLAPTPQLKERL 301

Query:   297 SNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITV 356
             + EFKGH LL+A R+ D +R+KK L+ ++VNFKHP T +T L            K+   +
Sbjct:   302 AYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALH-CAAASPYPKRKQICEL 360

Query:   357 AEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVT 416
                  A + E          T L VA E +   + E   VV  E+++      G  T + 
Sbjct:   361 LLRKGANINEKTKEF----LTPLHVASEKAHNDVVEV--VVKHEAKVNALDNLGQ-TSLH 413

Query:   417 RLLSSCPHIVNCRDLDGRHSTP-LHFAAGYNRVAV----VEYLLAHGADVHSKDNATDKW 471
             R  + C H+  CR L      P +    G+  + +    V+ LL  G  + + +   D+ 
Sbjct:   414 RA-AHCGHLQTCRLLLSYGCDPNIISLQGFTALQMGNENVQQLLQEGIPLGNSE--ADR- 469

Query:   472 GFTPLHEAAQKG--RTQXXXXXXXXXXXXXXXXRE---LFEACKGGDLTKVKKLV-NPQT 525
                 L EAA+ G   T                 R+   L  A     ++ V+ L+ +   
Sbjct:   470 ---QLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD 526

Query:   526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
             V+A+D  G           LVPLHNACSYGHYEV E+LVKHGA VNVADLWKFTPLHEAA
Sbjct:   527 VHAKDKGG-----------LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAA 575

Query:   586 AKA-------LLQHGADINLKNTDGKTALDL 609
             AK        LLQHGAD   KN DG T LDL
Sbjct:   576 AKGKYEICKLLLQHGADPTKKNRDGNTPLDL 606

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

UNIPROTKB|F1SCW9 TNKS2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 798 (286.0 bits), Expect = 9.6e-170, Sum P(4) = 9.6e-170
 Identities = 241/631 (38%), Positives = 322/631 (51%)

Query:    11 LASGASIHARDDGGLH--PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKG 68
             L +   +++RD  G    PLH A  FG  DVV  LL+  AN   RD+    PLH A + G
Sbjct:    43 LVTPEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFG 102

Query:    69 KTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH------KDRSCY--LAHGADPFLKNQE 120
               +V + +    H +  N            P+H      K   C   L HGA+P ++N +
Sbjct:   103 HAEV-VNLLL-RHGADPNAR----DNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTD 156

Query:   121 GQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS 180
             G+T LDL      +++L     +Y       E+A      +        NV+      ++
Sbjct:   157 GRTALDLA-DPSAKAVLT---GEYK-KDELLESARSGNEEKMMALLTPLNVNC-----HA 206

Query:   181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL---G-LVPLHNACSYGHFEVTEMLIKA 236
               G  S  L   +    + +  +++  G  V     G LVPLHNACSYGH+EVTE+L+K 
Sbjct:   207 SDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVPLHNACSYGHYEVTELLVKH 266

Query:   237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRL 296
             GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH+KSAID+APT +L++RL
Sbjct:   267 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSAIDLAPTPQLKERL 326

Query:   297 SNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITV 356
             + EFKGH LL+A R+ D +R+KK L+ ++VNFKHP T +T L            K+   +
Sbjct:   327 AYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALH-CAAASPYPKRKQICEL 385

Query:   357 AEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVT 416
                  A + E          T L VA E +   + E   VV  E+++      G  T + 
Sbjct:   386 LLRKGANINEKTKEF----LTPLHVASEKAHNDVVEV--VVKHEAKVNALDNLGQ-TSLH 438

Query:   417 RLLSSCPHIVNCRDLDGRHSTP-LHFAAGYNRVAV----VEYLLAHGADVHSKDNATDKW 471
             R  + C H+  CR L      P +    G+  + +    V+ LL  G  + + +   D+ 
Sbjct:   439 RA-AHCGHLQTCRLLLSYGCDPNIISLQGFTALQMGNENVQQLLQEGIPLGNSE--ADR- 494

Query:   472 GFTPLHEAAQKG--RTQXXXXXXXXXXXXXXXXRE---LFEACKGGDLTKVKKLV-NPQT 525
                 L EAA+ G   T                 R+   L  A     ++ V+ L+ +   
Sbjct:   495 ---QLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD 551

Query:   526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
             V+A+D  G           LVPLHNACSYGHYEV E+LVKHGA VNVADLWKFTPLHEAA
Sbjct:   552 VHAKDKGG-----------LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAA 600

Query:   586 AKA-------LLQHGADINLKNTDGKTALDL 609
             AK        LLQHGAD   KN DG T LDL
Sbjct:   601 AKGKYEICKLLLQHGADPTKKNRDGNTPLDL 631

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0070213 "protein auto-ADP-ribosylation" evidence=IEA

GO:0070198 "protein localization to chromosome, telomeric region" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0040014 "regulation of multicellular organism growth" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

GO:0000242 "pericentriolar material" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

UNIPROTKB|Q9H2K2 TNKS2 "Tankyrase-2" [Homo sapiens (taxid:9606)]

 Score = 798 (286.0 bits), Expect = 9.6e-170, Sum P(4) = 9.6e-170
 Identities = 241/631 (38%), Positives = 322/631 (51%)

Query:    11 LASGASIHARDDGGLH--PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKG 68
             L +   +++RD  G    PLH A  FG  DVV  LL+  AN   RD+    PLH A + G
Sbjct:    43 LVTPEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFG 102

Query:    69 KTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH------KDRSCY--LAHGADPFLKNQE 120
               +V + +    H +  N            P+H      K   C   L HGA+P ++N +
Sbjct:   103 HAEV-VNLLL-RHGADPNAR----DNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTD 156

Query:   121 GQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS 180
             G+T LDL      +++L     +Y       E+A      +        NV+      ++
Sbjct:   157 GRTALDLA-DPSAKAVLT---GEYK-KDELLESARSGNEEKMMALLTPLNVNC-----HA 206

Query:   181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL---G-LVPLHNACSYGHFEVTEMLIKA 236
               G  S  L   +    + +  +++  G  V     G LVPLHNACSYGH+EVTE+L+K 
Sbjct:   207 SDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVPLHNACSYGHYEVTELLVKH 266

Query:   237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRL 296
             GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADPTL NCH+KSAID+APT +L++RL
Sbjct:   267 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSAIDLAPTPQLKERL 326

Query:   297 SNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITV 356
             + EFKGH LL+A R+ D +R+KK L+ ++VNFKHP T +T L            K+   +
Sbjct:   327 AYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALH-CAAASPYPKRKQICEL 385

Query:   357 AEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVT 416
                  A + E          T L VA E +   + E   VV  E+++      G  T + 
Sbjct:   386 LLRKGANINEKTKEF----LTPLHVASEKAHNDVVEV--VVKHEAKVNALDNLGQ-TSLH 438

Query:   417 RLLSSCPHIVNCRDLDGRHSTP-LHFAAGYNRVAV----VEYLLAHGADVHSKDNATDKW 471
             R  + C H+  CR L      P +    G+  + +    V+ LL  G  + + +   D+ 
Sbjct:   439 RA-AYCGHLQTCRLLLSYGCDPNIISLQGFTALQMGNENVQQLLQEGISLGNSE--ADR- 494

Query:   472 GFTPLHEAAQKG--RTQXXXXXXXXXXXXXXXXRE---LFEACKGGDLTKVKKLV-NPQT 525
                 L EAA+ G   T                 R+   L  A     ++ V+ L+ +   
Sbjct:   495 ---QLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD 551

Query:   526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
             V+A+D  G           LVPLHNACSYGHYEV E+LVKHGA VNVADLWKFTPLHEAA
Sbjct:   552 VHAKDKGG-----------LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAA 600

Query:   586 AKA-------LLQHGADINLKNTDGKTALDL 609
             AK        LLQHGAD   KN DG T LDL
Sbjct:   601 AKGKYEICKLLLQHGADPTKKNRDGNTPLDL 631

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0040014 "regulation of multicellular organism growth" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IMP

GO:0000209 "protein polyubiquitination" evidence=IDA

GO:0070213 "protein auto-ADP-ribosylation" evidence=IDA

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IDA

GO:0019899 "enzyme binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0000242 "pericentriolar material" evidence=IDA

GO:0005635 "nuclear envelope" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0000784 "nuclear chromosome, telomeric region" evidence=IC

GO:0005634 "nucleus" evidence=IDA

GO:0006471 "protein ADP-ribosylation" evidence=IDA

GO:0032212 "positive regulation of telomere maintenance via telomerase" evidence=IC

GO:0070198 "protein localization to chromosome, telomeric region" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.2	0.766
3rd Layer	2.4.2.30	0.824

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	1236
cd01438	223	cd01438, tankyrase_like, Tankyrases interact with	1e-47
cd09524	66	cd09524, SAM_tankyrase1,2, SAM domain of tankyrase	2e-26
cd01438	223	cd01438, tankyrase_like, Tankyrases interact with	3e-26
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	5e-23
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-22
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	6e-22
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	6e-22
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-20
cd01438	223	cd01438, tankyrase_like, Tankyrases interact with	2e-18
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-18
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	3e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-18
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-16
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-16
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	5e-16
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-15
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-15
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-15
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	7e-15
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-14
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	3e-14
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	6e-13
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	7e-13
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-12
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	5e-12
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	8e-12
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	9e-12
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	9e-12
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-11
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-11
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-11
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-11
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-11
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	5e-11
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	1e-10
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-10
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	3e-10
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-10
cd09487	56	cd09487, SAM_superfamily, SAM (Sterile alpha motif	3e-10
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	4e-10
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	5e-10
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	6e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	6e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-10
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	9e-10
cd01438	223	cd01438, tankyrase_like, Tankyrases interact with	1e-09
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-09
pfam07647	66	pfam07647, SAM_2, SAM domain (Sterile alpha motif)	1e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-09
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-09
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-09
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-09
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	6e-09
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	7e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	8e-09
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	9e-09
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	1e-08
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-08
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-08
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-08
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-08
smart00454	68	smart00454, SAM, Sterile alpha motif	2e-08
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-08
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	4e-08
pfam00536	62	pfam00536, SAM_1, SAM domain (Sterile alpha motif)	5e-08
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	6e-08
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	8e-08
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	8e-08
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	8e-08
cd09523	65	cd09523, SAM_TAL, SAM domain of TAL subfamily	8e-08
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-07
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	2e-07
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	3e-07
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-07
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-07
cd09520	65	cd09520, SAM_BICC1, SAM domain of BICC1 (bicaudal)	3e-07
pfam00023	33	pfam00023, Ank, Ankyrin repeat	3e-07
cd09535	65	cd09535, SAM_BOI-like_fungal, SAM domain of BOI-li	3e-07
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	4e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-07
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	7e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	9e-07
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	1e-06
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-06
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	1e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-06
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-06
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	3e-06
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	4e-06
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	4e-06
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	4e-06
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	5e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	5e-06
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-06
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	6e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	6e-06
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	8e-06
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	8e-06
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	8e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	8e-06
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	8e-06
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	9e-06
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	9e-06
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	9e-06
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	1e-05
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-05
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-05
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-05
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-05
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	1e-05
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	1e-05
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-05
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	2e-05
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-05
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-05
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-05
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	3e-05
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	3e-05
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	3e-05
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-05
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-05
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-05
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	4e-05
cd09521	64	cd09521, SAM_ASZ1, SAM domain of ASZ1 subfamily	4e-05
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	5e-05
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	5e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	5e-05
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-05
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	6e-05
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	6e-05
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	8e-05
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	8e-05
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	9e-05
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-04
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-04
smart00248	30	smart00248, ANK, ankyrin repeats	1e-04
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	2e-04
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-04
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-04
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-04
cd09533	58	cd09533, SAM_Ste50-like_fungal, SAM domain of Ste5	2e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	2e-04
pfam00644	206	pfam00644, PARP, Poly(ADP-ribose) polymerase catal	2e-04
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	3e-04
cd09508	70	cd09508, SAM_HD, SAM domain of HD-phosphohydrolase	3e-04
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	4e-04
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	4e-04
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	5e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-04
smart00248	30	smart00248, ANK, ankyrin repeats	5e-04
smart00248	30	smart00248, ANK, ankyrin repeats	5e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	5e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	6e-04
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	6e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	7e-04
cd09519	64	cd09519, SAM_ANKS3, SAM domain of ANKS3 subfamily	7e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	8e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	9e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	9e-04
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	0.001
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.001
pfam00023	33	pfam00023, Ank, Ankyrin repeat	0.001
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	0.001
cd09534	62	cd09534, SAM_Ste11_fungal, SAM domain of Ste11_fun	0.001
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	0.002
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	0.002
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.002
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	0.002
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	0.003
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	0.003
smart00248	30	smart00248, ANK, ankyrin repeats	0.003
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	0.003
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	0.003
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	0.003
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	0.004
smart00248	30	smart00248, ANK, ankyrin repeats	0.004

>gnl|CDD|238718 cd01438, tankyrase_like, Tankyrases interact with the telomere reverse transcriptase complex (TERT)

 Score =  169 bits (429), Expect = 1e-47
 Identities = 78/150 (52%), Positives = 92/150 (61%), Gaps = 43/150 (28%)

Query: 873  GTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVH 932
            GT+L+DL  DDKE+ +V EEMQ+T+REHRD G +GGIF+RYNIIRIQKV N+KL ERY H
Sbjct: 15   GTILLDLAPDDKEYQSVEEEMQSTIREHRDGGNAGGIFNRYNIIRIQKVVNKKLRERYCH 74

Query: 933  RRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERM 992
            R+ E+A+EN    +ERMLFHG                                       
Sbjct: 75   RQKEIAEENHNHHNERMLFHG--------------------------------------- 95

Query: 993  LFHGSPFINAIVQKGFDERHAYIGGMFGAG 1022
                SPFINAI+ KGFDERHAYIGGMFGAG
Sbjct: 96   ----SPFINAIIHKGFDERHAYIGGMFGAG 121

Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin repeats that mediate protein-protein interaction (binding TRF1 and insulin-responsive aminopeptidase) and may function as a complex. Overexpression of Tank1 promotes increased telomere length when overexpressed, while overexpressed Tank2 has been shown to promote PARP cleavage- independent cell death (necrosis). Length = 223

>gnl|CDD|188923 cd09524, SAM_tankyrase1,2, SAM domain of tankyrase1,2 subfamily

 Score =  102 bits (257), Expect = 2e-26
 Identities = 36/53 (67%), Positives = 49/53 (92%)

Query: 814 NLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSS 866
           +LGL+HL E+FEREQITLD+LAEM HE+LK++G++AYG+RHKL+KG+E+L S 
Sbjct: 14  SLGLEHLREIFEREQITLDVLAEMGHEELKEIGINAYGHRHKLIKGVERLISG 66

SAM (sterile alpha motif) domain of Tankyrase1,2 subfamily is a protein-protein interaction domain. In addition to the SAM domain, proteins of this group have ankyrin repeats and a ADP- ribosyltransferase (poly-(ADP-ribose) synthase) domain. Tankyrases can polymerize through their SAM domains forming homoligomers and these complexes are disrupted by autoribosylation. Tankyrases apparently act as master scaffolding proteins and thus may interact simultaneously with multiple proteins, in particular with TRF1, NuMA, IRAP and Grb14 (ankyrin repeats are involved in these interactions). Tankyrases participate in a variety of cell signaling pathways as effector molecules. Their functions are different depending on the intracellular location: at telomeres they play a role in the regulation of telomere length via control of telomerase access to telomeres, at centrosomes they promote spindle assembly/disassembly, in Golgi vesicles they participate in the regulation of vesicle trafficking and Golgi dynamics. Tankyrase 1 may be of interest as new potential target for telomerase-directed cancer therapy. Length = 66

>gnl|CDD|238718 cd01438, tankyrase_like, Tankyrases interact with the telomere reverse transcriptase complex (TERT)

 Score =  108 bits (270), Expect = 3e-26
 Identities = 41/53 (77%), Positives = 47/53 (88%)

Query: 1176 RHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQ 1228
            R +L CRVTLGKSFLQF+A+KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ
Sbjct: 157  RQMLFCRVTLGKSFLQFSAMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQ 209

Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin repeats that mediate protein-protein interaction (binding TRF1 and insulin-responsive aminopeptidase) and may function as a complex. Overexpression of Tank1 promotes increased telomere length when overexpressed, while overexpressed Tank2 has been shown to promote PARP cleavage- independent cell death (necrosis). Length = 223

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 95.5 bits (238), Expect = 5e-23
 Identities = 61/161 (37%), Positives = 78/161 (48%), Gaps = 45/161 (27%)

Query: 427 NCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQ 486
           N RD DGR  TPLH AA    + VV+ LL +GADV++KDN     G TPLH AA+ G  +
Sbjct: 1   NARDEDGR--TPLHLAASNGHLEVVKLLLENGADVNAKDND----GRTPLHLAAKNGHLE 54

Query: 487 LSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLV 546
           +  LL                         ++K  +   VNARD  G   TPLH A    
Sbjct: 55  IVKLL-------------------------LEKGAD---VNARDKDGN--TPLHLA---- 80

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAK 587
                   G+ +V ++L+KHGA+VN  D    TPLH AA  
Sbjct: 81  -----ARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKN 116

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 92.8 bits (231), Expect = 4e-22
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 3/101 (2%)

Query: 703 YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLR 762
             G TPLH A ++       +V+ L+  GA +N K+ +   P+HLAA  GHL+++  LL 
Sbjct: 5   EDGRTPLHLAASN---GHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE 61

Query: 763 LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIV 803
            GA VN  D  G T LH  AR+     V++LL H AD +  
Sbjct: 62  KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNAR 102

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 92.4 bits (230), Expect = 6e-22
 Identities = 53/153 (34%), Positives = 71/153 (46%), Gaps = 46/153 (30%)

Query: 466 NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQT 525
           NA D+ G TPLH AA  G  ++  LL                         ++   +   
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLL-------------------------LENGAD--- 32

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
           VNA+D  GR  TPLH A            GH E+ ++L++ GA+VN  D    TPLH AA
Sbjct: 33  VNAKDNDGR--TPLHLA---------AKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAA 81

Query: 586 -------AKALLQHGADINLKNTDGKTALDLAV 611
                   K LL+HGAD+N ++ DG+T L LA 
Sbjct: 82  RNGNLDVVKLLLKHGADVNARDKDGRTPLHLAA 114

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 92.4 bits (230), Expect = 6e-22
 Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 31/138 (22%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  +VV+ LL +GA ++A+D+ G  PLH A   GH ++V+LLLE  A+ N RD    TP
Sbjct: 17  NGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTP 76

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH AA  G  DV                                   L HGAD   ++++
Sbjct: 77  LHLAARNGNLDVV-------------------------------KLLLKHGADVNARDKD 105

Query: 121 GQTPLDLTVAEDVRSLLQ 138
           G+TPL L        +++
Sbjct: 106 GRTPLHLAAKNGHLEVVK 123

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 88.2 bits (219), Expect = 2e-20
 Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 3/128 (2%)

Query: 667 IKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVES 726
            +DE     L  A   G    VK  L +          G TPLH A  +       IV+ 
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKN---GHLEIVKL 58

Query: 727 LIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDK 786
           L+ KGA +N ++K+   P+HLAA  G+LDV+  LL+ GA VN  D  G+T LH  A++  
Sbjct: 59  LLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGH 118

Query: 787 TQAVRVLL 794
            + V++LL
Sbjct: 119 LEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238718 cd01438, tankyrase_like, Tankyrases interact with the telomere reverse transcriptase complex (TERT)

 Score = 85.3 bits (211), Expect = 2e-18
 Identities = 32/36 (88%), Positives = 34/36 (94%)

Query: 75  GIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAH 110
           GIYFAE+SSKSNQYVYGIGGGTGCP HKDRSCY+ H
Sbjct: 121 GIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYVCH 156

Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin repeats that mediate protein-protein interaction (binding TRF1 and insulin-responsive aminopeptidase) and may function as a complex. Overexpression of Tank1 promotes increased telomere length when overexpressed, while overexpressed Tank2 has been shown to promote PARP cleavage- independent cell death (necrosis). Length = 223

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 82.0 bits (203), Expect = 2e-18
 Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 17/126 (13%)

Query: 1071 NVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL- 1128
            N  D    TPLH AA+ G  ++V+LLL++GAD + K+ DG TPL L  + G  ++  LL 
Sbjct: 1    NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 1129 -----------RGNSALLDAAKKGNLGRVQKLLTA-DNINCRDAQGRNSTPLHLAAGEKR 1176
                        GN+ L  AA+ GNL  V+ LL    ++N RD  GR  TPLHLAA +  
Sbjct: 61   EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGR--TPLHLAA-KNG 117

Query: 1177 HLLMCR 1182
            HL + +
Sbjct: 118  HLEVVK 123

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 88.9 bits (221), Expect = 3e-18
 Identities = 100/370 (27%), Positives = 144/370 (38%), Gaps = 81/370 (21%)

Query: 443 AGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPL 502
           A    V  V  LLA GADV+ +      +G TPLH             L  S     D +
Sbjct: 22  ASNVTVEEVRRLLAAGADVNFRGE----YGKTPLH-----------LYLHYSSEKVKDIV 66

Query: 503 RELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEM 562
           R L EA  G D            VNA +  G   TPLH       L+NA +    +V ++
Sbjct: 67  RLLLEA--GAD------------VNAPERCG--FTPLHLY-----LYNATTL---DVIKL 102

Query: 563 LVKHGANVNVADLWKFTPLH---------EAAAKALLQHGADINLKNTDGKTALDLAVPC 613
           L+K GA+VN  D    TPLH             + LL+ GAD+N  +  G T L + +  
Sbjct: 103 LIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKS 162

Query: 614 TRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKG 673
             A +       ELL    ++  G   Y       D           L+           
Sbjct: 163 RNANV-------ELLR--LLIDAGADVY-----AVDD------RFRSLL----------- 191

Query: 674 HCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAH 733
           H  L++ +      V++ + +          G+TPLH   T    KR ++V  L+  G  
Sbjct: 192 HHHLQSFKP-RARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKR-SLVLPLLIAGIS 249

Query: 734 LNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL 793
           +N +N+    P+H AA   +      L+ LGA +N V   G T L    R++  +AVR  
Sbjct: 250 INARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAA 309

Query: 794 LSHNADTSIV 803
           L+ N     V
Sbjct: 310 LAKNPSAETV 319

Length = 471

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 80.0 bits (198), Expect = 4e-18
 Identities = 40/103 (38%), Positives = 51/103 (49%), Gaps = 19/103 (18%)

Query: 505 LFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLV 564
           L  A K G+L  VK L+      A    G   T LH AA           G+ E+ ++L+
Sbjct: 1   LHLAAKNGNLELVKLLLEK---GADVNLGDTDTALHLAA---------RNGNLEIVKLLL 48

Query: 565 KHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKN 600
           +HGA+VN  D    T LH AA        K LL+HGADINLK+
Sbjct: 49  EHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 79.0 bits (195), Expect = 3e-17
 Identities = 58/162 (35%), Positives = 72/162 (44%), Gaps = 46/162 (28%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  A+  G + VV  LL +   + N +D DGR  TPLH AA    + +V+ LL  GADV 
Sbjct: 11  LHLAASNGHLEVVKLLLENGADV-NAKDNDGR--TPLHLAAKNGHLEIVKLLLEKGADV- 66

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              NA DK G TPLH AA+ G   +  LL                            L +
Sbjct: 67  ---NARDKDGNTPLHLAARNGNLDVVKLL----------------------------LKH 95

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLV 564
              VNARD  GR  TPLH AA           GH EV ++L+
Sbjct: 96  GADVNARDKDGR--TPLHLAA---------KNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 74.6 bits (184), Expect = 3e-16
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 1  YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           G  ++V+ LL  GA ++  D      LH A   G+ ++V+LLLE  A+ N +D    T 
Sbjct: 7  NGNLELVKLLLEKGADVNLGDTDT--ALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTA 64

Query: 61 LHEAAAKGKTDVC 73
          LH AA  G  ++ 
Sbjct: 65 LHLAARNGNLEIV 77

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 75.5 bits (186), Expect = 4e-16
 Identities = 30/74 (40%), Positives = 42/74 (56%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PLH A   GH E+ ++L++ GA+VNA D    TPLH AA    L+V  LLL  GAD 
Sbjct: 40  GRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADV 99

Query: 274 TLHNCHSKSAIDVA 287
              +   ++ + +A
Sbjct: 100 NARDKDGRTPLHLA 113

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 82.2 bits (203), Expect = 5e-16
 Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 49/205 (23%)

Query: 413 TVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWG 472
             +T+LL S    +N +D   + +T LH+A       + E LL++GA+V    N  DK  
Sbjct: 147 AEITKLLLSYGADINMKDRH-KGNTALHYATENKDQRLTELLLSYGANV----NIPDKTN 201

Query: 473 FTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTA 532
            +PLH A +                    +  L E              N  + +ARD  
Sbjct: 202 NSPLHHAVKHYN--------------KPIVHILLE--------------NGASTDARDKC 233

Query: 533 GRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNV-ADLWKFTPLH-----EAAA 586
           G  +TPLH + G            Y++ ++L++HG +VN  + +   T LH     E   
Sbjct: 234 G--NTPLHISVGYCK--------DYDILKLLLEHGVDVNAKSYILGLTALHSSIKSERKL 283

Query: 587 KALLQHGADINLKNTDGKTALDLAV 611
           K LL++GADIN  N+   T L  AV
Sbjct: 284 KLLLEYGADINSLNSYKLTPLSSAV 308

Length = 477

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 26/61 (42%), Positives = 35/61 (57%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
            LH A   G+ E+ ++L++ GA+VNA D    T LH AA    LE+  LLL  GAD  L 
Sbjct: 31  ALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Query: 277 N 277
           +
Sbjct: 91  D 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 9/71 (12%)

Query: 548 LHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKN 600
           LH A   G+ E+ ++L++ GA+VN+ D    T LH AA        K LL+HGAD+N K+
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGD--TDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 601 TDGKTALDLAV 611
            DG TAL LA 
Sbjct: 59  KDGNTALHLAA 69

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 71.5 bits (176), Expect = 5e-15
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 5/95 (5%)

Query: 709 LHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVN 768
           LH A  +   +   +V+ L+ KGA +N  + +    +HLAA  G+L+++  LL  GA VN
Sbjct: 1   LHLAAKNGNLE---LVKLLLEKGADVNLGDTDT--ALHLAARNGNLEIVKLLLEHGADVN 55

Query: 769 LVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIV 803
             D  G TALH  AR+   + V++LL H AD ++ 
Sbjct: 56  AKDKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 72.0 bits (177), Expect = 7e-15
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++ GA+VN  D    TPLH AA  G  D+V+LLL+HGAD + +++DG TPL L  + G  
Sbjct: 60   LEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHL 119

Query: 1123 DVSDLL 1128
            +V  LL
Sbjct: 120  EVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  A+K G++ +V  LL             G   T LH AA    + +V+ LL HGADV 
Sbjct: 1   LHLAAKNGNLELVKLLLEK-----GADVNLGDTDTALHLAARNGNLEIVKLLLEHGADV- 54

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALL 491
              NA DK G T LH AA+ G  ++  LL
Sbjct: 55  ---NAKDKDGNTALHLAARNGNLEIVKLL 80

Length = 91

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 77.4 bits (190), Expect = 3e-14
 Identities = 76/265 (28%), Positives = 121/265 (45%), Gaps = 38/265 (14%)

Query: 559 VTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLAV 611
           + EML++ GA+VN  D++  TP+H AA +        LL +GAD+N+   D  + L+ AV
Sbjct: 160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAV 219

Query: 612 PCT-----RAVL---SGDHKKE-ELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELM 662
                   +A++   S  +K +  LL+A R                D+   +     +  
Sbjct: 220 DSKNIDTIKAIIDNRSNINKNDLSLLKAIR--------------NEDLE--TSLLLYDAG 263

Query: 663 FMPRIKDEFKGHCLLEACRQGDPSR-VKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKR 720
           F     D+ K   L  A +    SR V K L     VN K+   G+TPL+    + Y   
Sbjct: 264 FSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKN-IKGETPLYLMAKNGYDTE 322

Query: 721 KAIVESLIRKGAHLNEKNKELLAPIHLAADLG-HLDVLDTLLRLGAKVNLVDVLGQTALH 779
              + +LI  GA +N  ++  + P+H A+ L  + D++ TLL LGA VN  D   +T +H
Sbjct: 323 N--IRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIH 380

Query: 780 RTARDDKTQAVRVLLSHNADTSIVS 804
             A  +    +  LL + AD   +S
Sbjct: 381 YAAVRNNVVIINTLLDYGADIEALS 405

Length = 682

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 66.6 bits (163), Expect = 6e-13
 Identities = 32/74 (43%), Positives = 43/74 (58%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PLH A S GH EV ++L++ GA+VNA D    TPLH AA    LE+  LLL +GAD 
Sbjct: 7   GRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADV 66

Query: 274 TLHNCHSKSAIDVA 287
              +    + + +A
Sbjct: 67  NARDKDGNTPLHLA 80

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 71.6 bits (176), Expect = 7e-13
 Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 24/195 (12%)

Query: 690 KFLTSDVVNFK-HPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNK-ELL----- 742
           ++L  +  N       G+  LH  + S     K I++ LI KG  +N KN+   L     
Sbjct: 125 EYLLDNGANVNIKNSDGENLLHLYLESNKIDLK-ILKLLIDKGVDINAKNRVNYLLSYGV 183

Query: 743 ----------APIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
                      P+H A    + + +  LL LGA  NLV+  G T LH    ++  +  ++
Sbjct: 184 PINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKL 243

Query: 793 LLSHNADTS-IVSLLVIFSCSTNLGLKHLLELFERE---QITLDILAEMNHEDLKQVGVS 848
           LL++      I+  L+ F    +L     +++ ++       LD     N + ++    S
Sbjct: 244 LLNNGPSIKTIIETLLYFK-DKDLNTITKIKMLKKSIMYMFLLDPGFYKNRKLIENS-KS 301

Query: 849 AYGYRHKLLKGIEKL 863
                ++  K IE++
Sbjct: 302 LKDVINECEKEIERM 316

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 21/54 (38%), Positives = 33/54 (61%)

Query: 1  YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD 54
           G  ++V+ LL  GA ++A+D  G   LH A   G+ ++V+LLLE  A+ N +D
Sbjct: 38 NGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 66.8 bits (162), Expect = 5e-12
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 7/162 (4%)

Query: 668 KDEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVT--SPYPKRKAIV 724
           +D      L  A  +GD   VK  L S   VN K    GDTPLH A    +P      + 
Sbjct: 69  RDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDAD-GDTPLHLAALNGNPPEGNIEVA 127

Query: 725 ESLIRKGAHL---NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRT 781
           + L+  GA L   N ++++   P+H AA  G  D+++ LL  GA  N  +  G TAL   
Sbjct: 128 KLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPA 187

Query: 782 ARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLEL 823
           A++ + + V++LL      S++   +    + N+  +++L L
Sbjct: 188 AKNGRIELVKLLLDKGLHLSLLKFNLEGVANANVSKRNILNL 229

Length = 235

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 68.5 bits (168), Expect = 8e-12
 Identities = 25/64 (39%), Positives = 35/64 (54%)

Query: 4   KDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHE 63
           K+ V YLL+ G  I+ +D  G  PLH A    + + V+ LL+  ANPN  + +  TPLH 
Sbjct: 172 KNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHI 231

Query: 64  AAAK 67
           A   
Sbjct: 232 AILN 235

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 61.9 bits (151), Expect = 9e-12
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)

Query: 676 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLN 735
           L  A + G+   VK  L     +     T DT LH A  +       IV+ L+  GA +N
Sbjct: 1   LHLAAKNGNLELVKLLLEKGA-DVNLGDT-DTALHLAARN---GNLEIVKLLLEHGADVN 55

Query: 736 EKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVD 771
            K+K+    +HLAA  G+L+++  LL  GA +NL D
Sbjct: 56  AKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 61.9 bits (151), Expect = 9e-12
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 218 LHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHN 277
           LH A   G+ E+ ++L++ GA+VN  D    T LH AA    LE+  LLL  GAD    +
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGD--TDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 278 CHSKSAIDVA 287
               +A+ +A
Sbjct: 59  KDGNTALHLA 68

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 63.2 bits (154), Expect = 1e-11
 Identities = 27/54 (50%), Positives = 33/54 (61%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLL 267
           G  PLH A   G+ +V ++L+K GA+VNA D    TPLH AA    LEV  LLL
Sbjct: 73  GNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
           N ++++   P+HLAA  GHL+V+  LL  GA VN  D  G+T LH  A++   + V++LL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 795 SHNAD 799
              AD
Sbjct: 61  EKGAD 65

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 60.7 bits (148), Expect = 2e-11
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 3/66 (4%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++ GA+VN+ D    T LH AA  G  +IV+LLL+HGAD + K++DG T L L  R G+ 
Sbjct: 17   LEKGADVNLGD--TDTALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNL 74

Query: 1123 DVSDLL 1128
            ++  LL
Sbjct: 75   EIVKLL 80

Length = 91

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 67.0 bits (164), Expect = 3e-11
 Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 42/185 (22%)

Query: 426 VNCRDLDGRHSTPLHFAAGY--NRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG 483
            N    D    TPL +A     N  ++VEYLL +GA+V    N  +  G   LH   +  
Sbjct: 97  ANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANV----NIKNSDGENLLHLYLESN 152

Query: 484 RTQLSALLPLSPSAANDPLRELFEACKGGDL---TKVKKLVNPQT-VNARDTAGRKSTPL 539
           +  L              L+ L +  KG D+    +V  L++    +N +D  G   TPL
Sbjct: 153 KIDL------------KILKLLID--KGVDINAKNRVNYLLSYGVPINIKDVYG--FTPL 196

Query: 540 HFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAA-------KALLQH 592
           H          A    + E  + L+  GAN N+ + +  TPLH A         K LL +
Sbjct: 197 H---------YAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNN 247

Query: 593 GADIN 597
           G  I 
Sbjct: 248 GPSIK 252

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 66.6 bits (163), Expect = 3e-11
 Identities = 54/198 (27%), Positives = 80/198 (40%), Gaps = 53/198 (26%)

Query: 435 HSTPLHFAAGYNRVA-----VVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSA 489
           +STPLH+ +           +V+ LL +GA+V    NA D  G TPL  A  K     S 
Sbjct: 68  NSTPLHYLSNIKYNLTDVKEIVKLLLEYGANV----NAPDNNGITPLLYAISKKSNSYSI 123

Query: 490 LLPLSPSAAN--------DPLRELFEACKGGDLTKVKKLVNPQT-VNARDTAGRKSTPLH 540
           +  L  + AN        + L  L+      DL  +K L++    +NA++          
Sbjct: 124 VEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKN---------- 173

Query: 541 FAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHG 593
                                 L+ +G  +N+ D++ FTPLH A         K LL  G
Sbjct: 174 ------------------RVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLG 215

Query: 594 ADINLKNTDGKTALDLAV 611
           A+ NL N  G T L +A+
Sbjct: 216 ANPNLVNKYGDTPLHIAI 233

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 65.8 bits (161), Expect = 5e-11
 Identities = 50/192 (26%), Positives = 69/192 (35%), Gaps = 57/192 (29%)

Query: 423 PHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQK 482
             + +          PL+ A     + VV+ LL +GAD++S     +    TPLH     
Sbjct: 25  DDLNDYSYKK--PVLPLYLAKEARNIDVVKILLDNGADINSSTK-NN---STPLHY---- 74

Query: 483 GRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLV-----NPQTVNARDTAGRKST 537
                     LS    N              LT VK++V         VNA D  G   T
Sbjct: 75  ----------LSNIKYN--------------LTDVKEIVKLLLEYGANVNAPDNNG--IT 108

Query: 538 PLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA---------AKA 588
           PL +A        +     Y + E L+ +GANVN+ +      LH             K 
Sbjct: 109 PLLYAI-------SKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKL 161

Query: 589 LLQHGADINLKN 600
           L+  G DIN KN
Sbjct: 162 LIDKGVDINAKN 173

Length = 422

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 65.0 bits (158), Expect = 1e-10
 Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 56/221 (25%)

Query: 398 DLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH 457
           +L++ L  A K GD+  +  L       VN  D +G +  P+H A  +N   +++ LL  
Sbjct: 123 ELKTFLHYAIKKGDLESIKMLFEYGAD-VNIEDDNGCY--PIHIAIKHNFFDIIKLLLEK 179

Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKV 517
           GA  + KDN     G +PLH AA                             + GD   +
Sbjct: 180 GAYANVKDN----NGESPLHNAA-----------------------------EYGDYACI 206

Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK 577
           K L++    +  +      TPLH A     +HN          E+L+ + A++N  D+  
Sbjct: 207 KLLID-HGNHIMNKCKNGFTPLHNAI----IHNR------SAIELLINN-ASINDQDIDG 254

Query: 578 FTPLHEA--------AAKALLQHGADINLKNTDGKTALDLA 610
            TPLH A            LL H ADI++K+  G+  +D A
Sbjct: 255 STPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTA 295

Length = 434

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 64.7 bits (157), Expect = 2e-10
 Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 34/178 (19%)

Query: 446 NRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSA-----AND 500
           + + + E LL  GADV    NA D +  TP+H AA++G  ++  LL LS  A     A D
Sbjct: 156 DELLIAEMLLEGGADV----NAKDIYCITPIHYAAERGNAKMVNLL-LSYGADVNIIALD 210

Query: 501 PLRELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEV 559
            L  L  A    ++  +K ++ N   +N  D               + L  A      E 
Sbjct: 211 DLSVLECAVDSKNIDTIKAIIDNRSNINKND---------------LSLLKAIRNEDLET 255

Query: 560 TEMLVKHGANVNVADLWKFTPLHEAA--------AKALLQHGADINLKNTDGKTALDL 609
           + +L   G +VN  D  K TPLH A+           LL+ GAD+N KN  G+T L L
Sbjct: 256 SLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYL 313

Length = 682

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 61.4 bits (148), Expect = 3e-10
 Identities = 55/189 (29%), Positives = 77/189 (40%), Gaps = 19/189 (10%)

Query: 435 HSTPLHFAAGYNRVAVVEYLLAHG--ADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLP 492
            S  L     +  + +V  LL         S            L  A+         +  
Sbjct: 5   LSALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDR 64

Query: 493 LSPSAANDPLRELFEACKGGDLTKVKKLVNPQ-TVNARDTAGRKSTPLHFAAGLVPLHNA 551
              +   D    L  A   GD   VK L+     VNA+D  G   TPLH AA    L+  
Sbjct: 65  HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADG--DTPLHLAA----LNGN 118

Query: 552 CSYGHYEVTEMLVKHGANVNVADLWKF---TPLHEAAA-------KALLQHGADINLKNT 601
              G+ EV ++L++ GA+++V +L      TPLH AA        + LL+ GAD N +N+
Sbjct: 119 PPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNS 178

Query: 602 DGKTALDLA 610
            G TALD A
Sbjct: 179 YGVTALDPA 187

Length = 235

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 63.4 bits (154), Expect = 3e-10
 Identities = 68/271 (25%), Positives = 104/271 (38%), Gaps = 73/271 (26%)

Query: 410 GDMTVVTRLLSSCPHIVNCRDLDGRHS-TPLHFAAGYNRVAVVEYLLAHGADV-HSKDNA 467
           GD+  + +++ +     NC ++    + TPL  A       +VE  + HGAD+ H     
Sbjct: 12  GDIEAIEKIIKN---KGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKI 68

Query: 468 TDKWGFTPLHEAAQKGRTQL----------SALLPLSPSAANDPLRELFE---------- 507
                  PL  A + G   +          +++LP+ P    D ++ + +          
Sbjct: 69  PH-----PLLTAIKIGAHDIIKLLIDNGVDTSILPI-PCIEKDMIKTILDCGIDVNIKDA 122

Query: 508 --------ACKGGDLTKVKKLVNPQT-VNARDTAGRKSTPLHFAA--------------- 543
                   A K GDL  +K L      VN  D  G    P+H A                
Sbjct: 123 ELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNG--CYPIHIAIKHNFFDIIKLLLEKG 180

Query: 544 ---------GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA-----AAKAL 589
                    G  PLHNA  YG Y   ++L+ HG ++       FTPLH A     +A  L
Sbjct: 181 AYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIEL 240

Query: 590 LQHGADINLKNTDGKTALDLAV--PCTRAVL 618
           L + A IN ++ DG T L  A+  PC   ++
Sbjct: 241 LINNASINDQDIDGSTPLHHAINPPCDIDII 271

Length = 434

>gnl|CDD|188886 cd09487, SAM_superfamily, SAM (Sterile alpha motif )

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 18/48 (37%), Positives = 33/48 (68%)

Query: 815 LGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEK 862
           LGL+   +LF + +I  D L  +  EDLK++G+++ G+R K+L+ I++
Sbjct: 9   LGLEQYADLFRKNEIDGDALLLLTDEDLKELGITSPGHRKKILRAIQR 56

SAM (Sterile Alpha Motif) domain is a module consisting of approximately 70 amino acids. This domain is found in the Fungi/Metazoa group and in a restricted number of bacteria. Proteins with SAM domains are represented by a wide variety of domain architectures and have different intracellular localization, including nucleus, cytoplasm and membranes. SAM domains have diverse functions. They can interact with proteins, RNAs and membrane lipids, contain site of phosphorylation and/or kinase docking site, and play a role in protein homo and hetero dimerization/oligomerization in processes ranging from signal transduction to regulation of transcription. Mutations in SAM domains have been linked to several diseases. Length = 56

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 63.1 bits (154), Expect = 4e-10
 Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 57/251 (22%)

Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA------------AKALLQHG 593
           +PL+ A    + +V ++L+ +GA++N +     TPLH  +             K LL++G
Sbjct: 37  LPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG 96

Query: 594 ADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARM--------MGGGLHRYTWPL 645
           A++N  + +G T L  A+       S  +   E L                 LH Y    
Sbjct: 97  ANVNAPDNNGITPLLYAISKK----SNSYSIVEYLLDNGANVNIKNSDGENLLHLYL--- 149

Query: 646 GTTDIGWCSCCCK----MELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFK 700
                            ++L+    +         + A      +RV   L+  V +N K
Sbjct: 150 --------ESNKIDLKILKLLIDKGVD--------INAK-----NRVNYLLSYGVPINIK 188

Query: 701 HPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTL 760
             Y G TPLH AV +  P+    V+ L+  GA+ N  NK    P+H+A    + ++   L
Sbjct: 189 DVY-GFTPLHYAVYNNNPE---FVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLL 244

Query: 761 LRLGAKVNLVD 771
           L  G  +  + 
Sbjct: 245 LNNGPSIKTII 255

Length = 422

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 61.0 bits (147), Expect = 5e-10
 Identities = 52/162 (32%), Positives = 66/162 (40%), Gaps = 37/162 (22%)

Query: 427 NCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQ 486
             RDLDGR   PLH AA      +V+ LLA GADV    NA D  G TPLH AA  G   
Sbjct: 67  AARDLDGR--LPLHSAASKGDDKIVKLLLASGADV----NAKDADGDTPLHLAALNGNPP 120

Query: 487 LSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLV 546
                        +  + L E              +    N RD  G   TPLH+AA   
Sbjct: 121 EGN---------IEVAKLLLE-----------AGADLDVNNLRDEDGN--TPLHWAAL-- 156

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA 588
                   G  ++ E+L++ GA+ N  + +  T L  AA   
Sbjct: 157 -------NGDADIVELLLEAGADPNSRNSYGVTALDPAAKNG 191

Length = 235

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 57.8 bits (140), Expect = 6e-10
 Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 41/166 (24%)

Query: 597 NLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCC 656
           N ++ DG+T L L      A  +G  +  +LL                            
Sbjct: 1   NARDEDGRTPLHL------AASNGHLEVVKLL---------------------------- 26

Query: 657 CKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTS 715
             +E       KD      L  A + G    VK  L     VN +    G+TPLH A  +
Sbjct: 27  --LENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARD-KDGNTPLHLAARN 83

Query: 716 PYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLL 761
                  +V+ L++ GA +N ++K+   P+HLAA  GHL+V+  LL
Sbjct: 84  GNLD---VVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 56.9 bits (138), Expect = 6e-10
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKN 1107
            ++HGA+VN  D    T LH AA  G  +IV+LLL+HGAD + K+
Sbjct: 48   LEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 56.5 bits (137), Expect = 7e-10
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)

Query: 387 KKLLQEPPSVVDLESQ--LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAG 444
           K LL++   V   ++   L  A++ G++ +V  LL     + N +D DG   T LH AA 
Sbjct: 14  KLLLEKGADVNLGDTDTALHLAARNGNLEIVKLLLEHGADV-NAKDKDGN--TALHLAAR 70

Query: 445 YNRVAVVEYLLAHGADVHSKD 465
              + +V+ LL HGAD++ KD
Sbjct: 71  NGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 62.3 bits (152), Expect = 9e-10
 Identities = 55/195 (28%), Positives = 74/195 (37%), Gaps = 50/195 (25%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNR--VAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG 483
           VN  DL G   TPL          V ++  L+  GADV++ D+       + LH   Q  
Sbjct: 145 VNALDLYGM--TPLAVLLKSRNANVELLRLLIDAGADVYAVDDR----FRSLLHHHLQ-- 196

Query: 484 RTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAA 543
                     S       +REL  A  G D              A D  G   TPLH  A
Sbjct: 197 ----------SFKPRARIVRELIRA--GCD------------PAATDMLGN--TPLHSMA 230

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQHGADI 596
                 ++C      +   L+  G ++N  + +  TPLH AA          L+  GADI
Sbjct: 231 ----TGSSCKRS---LVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADI 283

Query: 597 NLKNTDGKTALDLAV 611
           N  ++DG T L L V
Sbjct: 284 NAVSSDGNTPLSLMV 298

Length = 471

>gnl|CDD|238718 cd01438, tankyrase_like, Tankyrases interact with the telomere reverse transcriptase complex (TERT)

 Score = 59.1 bits (143), Expect = 1e-09
 Identities = 23/37 (62%), Positives = 30/37 (81%)

Query: 340 GTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGY 376
           GT+L+DL  DDKE+ +V EEMQ+T+REHRD G +GG 
Sbjct: 15  GTILLDLAPDDKEYQSVEEEMQSTIREHRDGGNAGGI 51

Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin repeats that mediate protein-protein interaction (binding TRF1 and insulin-responsive aminopeptidase) and may function as a complex. Overexpression of Tank1 promotes increased telomere length when overexpressed, while overexpressed Tank2 has been shown to promote PARP cleavage- independent cell death (necrosis). Length = 223

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 25/93 (26%)

Query: 1081 LHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKK 1140
            LH AA  G  ++V+LLL+ GAD +  + D                      +AL  AA+ 
Sbjct: 1    LHLAAKNGNLELVKLLLEKGADVNLGDTD----------------------TALHLAARN 38

Query: 1141 GNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
            GNL  V+ LL    ++N +D  G   T LHLAA
Sbjct: 39   GNLEIVKLLLEHGADVNAKDKDGN--TALHLAA 69

Length = 91

>gnl|CDD|203706 pfam07647, SAM_2, SAM domain (Sterile alpha motif)

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           ++GL    + F  + IT  ++L  +  EDLK +G+++ G+R K+LK I++L
Sbjct: 15  SIGLPQYADNFRDQGITGGELLLRLTEEDLKALGITSVGHRKKILKKIQRL 65

Length = 66

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 435 HSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
             T LH AA   R+ +V+YLL  G D+    N TD+ G T LH AA+ G  ++  LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDI----NRTDEDGNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 60.4 bits (147), Expect = 3e-09
 Identities = 68/248 (27%), Positives = 94/248 (37%), Gaps = 45/248 (18%)

Query: 249 TPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEA 308
            PL+ A     ++V  +LL  GAD      +S +  +  P   L     N          
Sbjct: 37  LPLYLAKEARNIDVVKILLDNGADI-----NSSTKNNSTPLHYLSNIKYNL--------- 82

Query: 309 CRQGDPSRVKKFLTSDVVNFKHPY-TGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREH 367
               D   + K L     N   P   G TPL     I   S+    +    +  A V   
Sbjct: 83  ---TDVKEIVKLLLEYGANVNAPDNNGITPL--LYAISKKSNSYSIVEYLLDNGANVNIK 137

Query: 368 RDNGQSGGYTALQVAGENSKKLLQEPPSVVDLE-SQLLEASKGGD---MTVVTRLLSSCP 423
                S G   L +  E++K         +DL+  +LL   KG D      V  LLS   
Sbjct: 138 N----SDGENLLHLYLESNK---------IDLKILKLL-IDKGVDINAKNRVNYLLSYGV 183

Query: 424 HIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG 483
            I N +D+ G   TPLH+A   N    V+YLL  GA+     N  +K+G TPLH A    
Sbjct: 184 PI-NIKDVYG--FTPLHYAVYNNNPEFVKYLLDLGANP----NLVNKYGDTPLHIAILNN 236

Query: 484 RTQLSALL 491
             ++  LL
Sbjct: 237 NKEIFKLL 244

Length = 422

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 18/50 (36%), Positives = 23/50 (46%)

Query: 24 GLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVC 73
          G   LH A   G  ++V+ LLE   + N  D    T LH AA  G  +V 
Sbjct: 1  GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVL 50

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 53.4 bits (129), Expect = 4e-09
 Identities = 20/51 (39%), Positives = 26/51 (50%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLL 267
            LH A   G  E+ + L++ G ++N  D    T LH AA    LEV  LLL
Sbjct: 4   ALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 59.7 bits (145), Expect = 6e-09
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIH--LAADLGHLDVLDTLLR 762
           G TPLH  +         +++ LI+ GA +N K+K    P+H  L+    +  V+  LLR
Sbjct: 83  GFTPLHLYLY--NATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLR 140

Query: 763 LGAKVNLVDVLGQTALHRTARDDKTQAVRVLL-SHNADTSIVSLLV 807
            GA VN +D+ G T L             VLL S NA+  ++ LL+
Sbjct: 141 KGADVNALDLYGMTPLA------------VLLKSRNANVELLRLLI 174

Length = 471

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 59.7 bits (145), Expect = 6e-09
 Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 24/130 (18%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGK---ADIVRLLLQHGADPSKKNRDGATPLD-LVRE 1119
            +K GA+VN  D    TPLH     G      ++RLLL+ GAD +  +  G TPL  L++ 
Sbjct: 104  IKAGADVNAKDKVGRTPLH-VYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKS 162

Query: 1120 GDQDVS--DLL------------RGNSAL---LDAAKKGNLGRVQKLLTADNINCRDAQG 1162
             + +V    LL            R  S L   L + K     R+ + L     +      
Sbjct: 163  RNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRA--RIVRELIRAGCDPAATDM 220

Query: 1163 RNSTPLHLAA 1172
              +TPLH  A
Sbjct: 221  LGNTPLHSMA 230

Length = 471

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 59.3 bits (144), Expect = 6e-09
 Identities = 43/153 (28%), Positives = 55/153 (35%), Gaps = 30/153 (19%)

Query: 1043 LETGTKKKKKNMYYGTLTP----------HNV-------KHGANVNVADLWKFTPLHEAA 1085
            L+ G           T                       ++GANVN  D    TPL  A 
Sbjct: 55   LDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAI 114

Query: 1086 AK--GKADIVRLLLQHGADPSKKNRDGATPLDLVREG---DQDVSDLLRGNSALLDAAKK 1140
            +K      IV  LL +GA+ + KN DG   L L  E    D  +  LL      ++A   
Sbjct: 115  SKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKN- 173

Query: 1141 GNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                RV  LL+    IN +D      TPLH A 
Sbjct: 174  ----RVNYLLSYGVPINIKDV--YGFTPLHYAV 200

Length = 422

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 59.5 bits (144), Expect = 7e-09
 Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 37/207 (17%)

Query: 438 PLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQ-LSALLP-LSP 495
           PLH A     + VV+ LL  G +V    N  D    TPLH   ++     +  ++  ++ 
Sbjct: 40  PLHQAVEARNLDVVKSLLTRGHNV----NQPDHRDLTPLHIICKEPNKLGMKEMIRSINK 95

Query: 496 SAANDPLRELFEACKGGDLTKVK-------------KLVNPQTVNARDTAGRKSTPLHFA 542
            +    L  + +A    ++   K              LV     +  D    + T L  +
Sbjct: 96  CSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLS 155

Query: 543 AGL-----------VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAA----- 586
            G              LH A       +TE+L+ +GANVN+ D    +PLH A       
Sbjct: 156 YGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKP 215

Query: 587 --KALLQHGADINLKNTDGKTALDLAV 611
               LL++GA  + ++  G T L ++V
Sbjct: 216 IVHILLENGASTDARDKCGNTPLHISV 242

Length = 477

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 52.2 bits (126), Expect = 8e-09
 Identities = 18/44 (40%), Positives = 27/44 (61%)

Query: 1  YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLL 44
           GR ++V+YLL  G  I+  D+ G   LH A   G+ +V++LLL
Sbjct: 11 SGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 52.4 bits (126), Expect = 9e-09
 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 1064 VKHG-ANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLV 1117
            ++HG  ++N  D    TPLH AA  G  ++V+ LL+ G D + ++ DG T LDL 
Sbjct: 2    LEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 58.5 bits (142), Expect = 1e-08
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 10/132 (7%)

Query: 3   RKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADV--VRLLLEADANPNTRDNWNFTP 60
              V+  LL  GA ++A D  G+ PL       +A+V  +RLL++A A+    D+   + 
Sbjct: 131 NPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSL 190

Query: 61  LH-------EAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGAD 113
           LH         A   +  +  G   A      N  ++ +  G+ C         L  G  
Sbjct: 191 LHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCK-RSLVLPLLIAGIS 249

Query: 114 PFLKNQEGQTPL 125
              +N+ GQTPL
Sbjct: 250 INARNRYGQTPL 261

Length = 471

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 33/98 (33%)

Query: 28  LHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQ 87
           LH A   G+ ++V+LLLE  A+ N  D    T LH AA  G  ++               
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIV-------------- 44

Query: 88  YVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                               L HGAD   K+++G T L
Sbjct: 45  -----------------KLLLEHGADVNAKDKDGNTAL 65

Length = 91

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 58.7 bits (142), Expect = 1e-08
 Identities = 65/286 (22%), Positives = 101/286 (35%), Gaps = 52/286 (18%)

Query: 207 SGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLL 266
           S  A  +  +PLH A    + +V + L+  G NVN  D    TPLH    +        +
Sbjct: 30  STSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEM 89

Query: 267 LSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVV 326
           +                         +  +        + +A    +    K  LT+   
Sbjct: 90  IRS---------------------INKCSVFYTLVA--IKDAFNNRNVEIFKIILTN--- 123

Query: 327 NFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVR---EHRDNGQSGGYTALQVAG 383
            +K+  T D         D    + E   +     A +     H+ N      TAL  A 
Sbjct: 124 RYKNIQTIDLVYIDKKSKD-DIIEAEITKLLLSYGADINMKDRHKGN------TALHYAT 176

Query: 384 ENSKKLLQE-------PPSVVDL--ESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGR 434
           EN  + L E         ++ D    S L  A K  +  +V  LL +     + RD  G 
Sbjct: 177 ENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST-DARDKCG- 234

Query: 435 HSTPLHFAAGY-NRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEA 479
            +TPLH + GY     +++ LL HG DV++K       G T LH +
Sbjct: 235 -NTPLHISVGYCKDYDILKLLLEHGVDVNAKSYIL---GLTALHSS 276

Length = 477

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 56.4 bits (135), Expect = 1e-08
 Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 2   GRKDVVEYLLASGAS---IHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNF 58
           G  +V + LL +GA     + RD+ G  PLH A   G AD+V LLLEA A+PN+R+++  
Sbjct: 122 GNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGV 181

Query: 59  TPLHEAAAKGKTDV 72
           T L  AA  G+ ++
Sbjct: 182 TALDPAAKNGRIEL 195

Length = 235

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 15 ASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEA 64
            ++A D  G  PLH A  +G  ++V+ LL+   + N RD+   T L  A
Sbjct: 7  IDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|197735 smart00454, SAM, Sterile alpha motif

 Score = 51.9 bits (125), Expect = 2e-08
 Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 815 LGLKHLLELFEREQITLDILAEM-NHEDLKQVGVSAYGYRHKLLKGIEKL 863
           +GL+   + F +  I   +L  + + EDLK++G++  G+R K+LK I+KL
Sbjct: 16  IGLEQYADNFRKNGIDGALLLLLTSEEDLKELGITKLGHRKKILKAIQKL 65

Widespread domain in signalling and nuclear proteins. In EPH-related tyrosine kinases, appears to mediate cell-cell initiated signal transduction via the binding of SH2-containing proteins to a conserved tyrosine that is phosphorylated. In many cases mediates homodimerisation. Length = 68

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 58.4 bits (141), Expect = 2e-08
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVS 1125
            GA+ N  D    TPLH A A G   +VR+LL+ GADP+  ++DG TPL+L    G ++V 
Sbjct: 105  GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVV 164

Query: 1126 DLLRGNS 1132
             LL  +S
Sbjct: 165  QLLSRHS 171

Length = 664

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 55.2 bits (132), Expect = 4e-08
 Identities = 39/115 (33%), Positives = 47/115 (40%), Gaps = 14/115 (12%)

Query: 1071 NVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRG 1130
               DL    PLH AA+KG   IV+LLL  GAD + K+ DG TPL L           +  
Sbjct: 67   AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEV 126

Query: 1131 NSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTL 1185
               LL+A               D  N RD  G   TPLH AA       +  + L
Sbjct: 127  AKLLLEAGADL-----------DVNNLRDEDGN--TPLHWAALN-GDADIVELLL 167

Length = 235

>gnl|CDD|215981 pfam00536, SAM_1, SAM domain (Sterile alpha motif)

 Score = 50.3 bits (121), Expect = 5e-08
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 815 LGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           +GL    + F    I  D L  +  EDL ++GV+  G+R K+L  I+ L
Sbjct: 13  IGLGQYADNFRAGYIDGDALLLLTEEDLLKLGVTLPGHRKKILSSIQGL 61

It has been suggested that SAM is an evolutionarily conserved protein binding domain that is involved in the regulation of numerous developmental processes in diverse eukaryotes. The SAM domain can potentially function as a protein interaction module through its ability to homo- and heterooligomerise with other SAM domains. Length = 62

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 56.8 bits (137), Expect = 6e-08
 Identities = 37/93 (39%), Positives = 45/93 (48%), Gaps = 7/93 (7%)

Query: 399 LESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHG 458
           L  +L + +  GD  V  R+L +     NCRD DGR  TPLH A     V VV  LL  G
Sbjct: 82  LTVELCQLAASGD-AVGARILLTGGADPNCRDYDGR--TPLHIACANGHVQVVRVLLEFG 138

Query: 459 ADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           AD        DK G TPL  A + G  ++  LL
Sbjct: 139 ADP----TLLDKDGKTPLELAEENGFREVVQLL 167

Length = 664

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 23/44 (52%), Positives = 28/44 (63%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLL 44
            G  DVV+ LL  GA ++ARD  G  PLH A   GH +VV+LLL
Sbjct: 83  NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 54.4 bits (130), Expect = 8e-08
 Identities = 44/135 (32%), Positives = 54/135 (40%), Gaps = 39/135 (28%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGH-----ADVVRLLLEADA---NPNT 52
            G   +V+ LLASGA ++A+D  G  PLH A   G+      +V +LLLEA A     N 
Sbjct: 83  KGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL 142

Query: 53  RDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGA 112
           RD    TPLH AA  G  D+                                   L  GA
Sbjct: 143 RDEDGNTPLHWAALNGDADIV-------------------------------ELLLEAGA 171

Query: 113 DPFLKNQEGQTPLDL 127
           DP  +N  G T LD 
Sbjct: 172 DPNSRNSYGVTALDP 186

Length = 235

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 55.7 bits (134), Expect = 8e-08
 Identities = 74/294 (25%), Positives = 117/294 (39%), Gaps = 57/294 (19%)

Query: 199 ALETVIMPSGQAVALGL----VPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEA 254
           A+E +I   G  + + +     PL +A   G  ++ E+ IK GA++N ++     PL  A
Sbjct: 16  AIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTA 75

Query: 255 ASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDP 314
                 ++  LL+  G D +           + P   +++ +                  
Sbjct: 76  IKIGAHDIIKLLIDNGVDTS-----------ILPIPCIEKDM------------------ 106

Query: 315 SRVKKFLTSDV-VNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQS 373
             +K  L   + VN K     D  L   L   +   D E I +  E  A V    DNG  
Sbjct: 107 --IKTILDCGIDVNIK-----DAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCY 159

Query: 374 GGYTALQVAGENSKKLLQEPPSVVDL-----ESQLLEASKGGDMTVVTRLLSSCPHIVN- 427
             + A++    +  KLL E  +  ++     ES L  A++ GD   +  L+    HI+N 
Sbjct: 160 PIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNK 219

Query: 428 CRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQ 481
           C+       TPLH A  +NR A+   LL + A +    N  D  G TPLH A  
Sbjct: 220 CK----NGFTPLHNAIIHNRSAIE--LLINNASI----NDQDIDGSTPLHHAIN 263

Length = 434

>gnl|CDD|188922 cd09523, SAM_TAL, SAM domain of TAL subfamily

 Score = 50.0 bits (120), Expect = 8e-08
 Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 796 HNADTSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHK 855
              D  +V+LL        L  +H L +F R +IT++ L+ M  EDLK++G+   G R +
Sbjct: 2   AGVDPQLVNLLN------ELSAEHYLPVFARHRITMETLSTMTDEDLKKIGIHEIGLRKE 55

Query: 856 LLKGIEKL 863
           +L+  ++L
Sbjct: 56  ILRAAQEL 63

SAM (sterile alpha motif) domain of TAL (Tsg101-associated ligase) proteins, also known as LRSAM1 (Leucine-rich repeat and sterile alpha motif-containing) proteins, is a putative protein-protein interaction domain. Proteins of this subfamily participate in the regulation of retrovirus budding and receptor endocytosis. They show E3 ubiquitin ligase activity. Human TAL protein interacts with Tsg101 and TAL's C-terminal ring finger domain is essential for the multiple monoubiquitylation of Tsg101. Length = 65

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 55.8 bits (134), Expect = 1e-07
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 49/236 (20%)

Query: 392 EPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAA--GYNRVA 449
           + PS+  L  +LLE  +G D              VN +++ G   TPL+  A  GY+   
Sbjct: 282 QAPSLSRLVPKLLE--RGAD--------------VNAKNIKGE--TPLYLMAKNGYD-TE 322

Query: 450 VVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFE-- 507
            +  L+  GADV    NA D+   TPLH+A+   R +   ++ L    AN   R+  +  
Sbjct: 323 NIRTLIMLGADV----NAADRLYITPLHQASTLDRNK-DIVITLLELGANVNARDYCDKT 377

Query: 508 ----ACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEML 563
               A    ++  +  L++    +    + +  T LHFA         C    Y   + L
Sbjct: 378 PIHYAAVRNNVVIINTLLD-YGADIEALSQKIGTALHFAL--------CGTNPYMSVKTL 428

Query: 564 VKHGANVNVADLWKFTPLHEAAA--------KALLQHGADINLKNTDGKTALDLAV 611
           +  GANVN  +    TPLH A          + LL +GAD+N  N   +  L +A+
Sbjct: 429 IDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIAL 484

Length = 682

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 54.5 bits (131), Expect = 2e-07
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
           +N K  + G+T LH A  +   +   + E L+  GA++N  +K   +P+H A    +  +
Sbjct: 160 INMKDRHKGNTALHYATENKDQR---LTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPI 216

Query: 757 LDTLLRLGAKVNLVDVLGQTALH-RTARDDKTQAVRVLLSHNADTSIVSLLVIFS 810
           +  LL  GA  +  D  G T LH           +++LL H  D +  S ++  +
Sbjct: 217 VHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLT 271

Length = 477

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 54.5 bits (131), Expect = 3e-07
 Identities = 41/131 (31%), Positives = 56/131 (42%), Gaps = 10/131 (7%)

Query: 5   DVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEA 64
            + E LL+ GA+++  D     PLH+A    +  +V +LLE  A+ + RD    TPLH +
Sbjct: 182 RLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHIS 241

Query: 65  AAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH------KDRSCYLAHGADPFLKN 118
               K D  I     EH    N   Y I G T   +H      +     L +GAD    N
Sbjct: 242 VGYCK-DYDILKLLLEHGVDVNAKSY-ILGLT--ALHSSIKSERKLKLLLEYGADINSLN 297

Query: 119 QEGQTPLDLTV 129
               TPL   V
Sbjct: 298 SYKLTPLSSAV 308

Length = 477

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 54.3 bits (131), Expect = 3e-07
 Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 13/117 (11%)

Query: 695 DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGH- 753
           +  ++K P     PL+ A  +   +   +V+ L+  GA +N   K    P+H  +++ + 
Sbjct: 28  NDYSYKKPVL---PLYLAKEA---RNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYN 81

Query: 754 ----LDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQA--VRVLLSHNADTSIVS 804
                +++  LL  GA VN  D  G T L             V  LL + A+ +I +
Sbjct: 82  LTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKN 138

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 53.9 bits (130), Expect = 3e-07
 Identities = 62/258 (24%), Positives = 102/258 (39%), Gaps = 55/258 (21%)

Query: 504 ELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAG--LVPLHNACSYGHYEVTE 561
            L+ A +  ++  VK L++    +   +    STPLH+ +                E+ +
Sbjct: 38  PLYLAKEARNIDVVKILLD-NGADINSSTKNNSTPLHYLSNIKYNLTDVK------EIVK 90

Query: 562 MLVKHGANVNVADLWKFTPLHEAAAKA---------LLQHGADINLKNTDGKTALDLAVP 612
           +L+++GANVN  D    TPL  A +K          LL +GA++N+KN+DG+  L L   
Sbjct: 91  LLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHL--- 147

Query: 613 CTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELM----FMPRIK 668
                L  +    ++L+                   DI   +   ++  +        IK
Sbjct: 148 ----YLESNKIDLKILK------------LLIDKGVDI---NAKNRVNYLLSYGVPINIK 188

Query: 669 DEFKGHCLLEACRQGDPSRVKKFLTS----DVVNFKHPYTGDTPLHCAVTSPYPKRKAIV 724
           D +    L  A    +P  VK  L      ++VN      GDTPLH A+       K I 
Sbjct: 189 DVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVN----KYGDTPLHIAI---LNNNKEIF 241

Query: 725 ESLIRKGAHLNEKNKELL 742
           + L+  G  +    + LL
Sbjct: 242 KLLLNNGPSIKTIIETLL 259

Length = 422

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 47.7 bits (114), Expect = 3e-07
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 8/56 (14%)

Query: 563 LVKHG-ANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLA 610
           L++HG  ++N  D    TPLH AA        + LL+ G D+NL+++DG TALDLA
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|188919 cd09520, SAM_BICC1, SAM domain of BICC1 (bicaudal) subfamily

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 18/51 (35%), Positives = 33/51 (64%)

Query: 813 TNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
             LGL+  ++LF +++I L     +  +DLK++G++A+G R K+L  I +L
Sbjct: 12  AKLGLEKYIDLFAQQEIDLQTFLTLTDQDLKELGITAFGARRKMLLAISEL 62

SAM (sterile alpha motif) domain of BICC1 (bicaudal) subfamily is a protein-protein interaction domain. Proteins of this group have N-terminal K homology RNA-binding vigilin-like repeats and a C-terminal SAM domain. BICC1 is involved in the regulation of embryonic differentiation. It plays a role in the regulation of Dvl (Dishevelled) signaling, particularly in the correct cilia orientation and nodal flow generation. In Drosophila, disruption of BICC1 can disturb the normal migration direction of the anterior follicle cell of oocytes; the specific function of SAM is to recruit whole protein to the periphery of P-bodies. In mammals, mutations in this gene are associated with polycystic kidney disease and it was suggested that the BICC1 protein can indirectly interact with ANKS6 protein (ANKS6 is also associated with polycystic kidney disease) through some protein and RNA intermediates. Length = 65

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 14/31 (45%), Positives = 22/31 (70%)

Query: 1078 FTPLHEAAAKGKADIVRLLLQHGADPSKKNR 1108
             TPLH AA  G  ++V+LLL+ GAD + +++
Sbjct: 3    NTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|188934 cd09535, SAM_BOI-like_fungal, SAM domain of BOI-like fungal subfamily

 Score = 47.9 bits (115), Expect = 3e-07
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query: 818 KHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
             + E F   +IT DIL E++ EDLK++ + ++G R KL   I+ L
Sbjct: 19  DSVCEKFRENEITGDILLELDLEDLKELDIGSFGKRFKLWNEIKSL 64

SAM (sterile alpha motif) domain of BOI-like fungal subfamily is a potential protein-protein interaction domain. Proteins of this subfamily are apparently scaffold proteins, since most contain SH3 and PH domains, which are also protein-protein interaction domains, in addition to SAM domain. BOI-like proteins participate in cell cycle regulation. In particular BOI1 and BOI2 proteins of budding yeast S.cerevisiae are involved in bud formation, and POB1 protein of fission yeast S.pombe plays a role in cell elongation and separation. Among binding partners of BOI-like fungal subfamily members are such proteins as Bem1 and Cdc42 (they are known to be involved in cell polarization and bud formation). Length = 65

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 53.5 bits (129), Expect = 4e-07
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPL 1114
             +G  +N+ D++ FTPLH A      + V+ LL  GA+P+  N+ G TPL
Sbjct: 180  SYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPL 229

Length = 422

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 20/72 (27%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAA 1138
            T LH+AA  G+ ++V+ LL+ G D ++ + DG T L +                    AA
Sbjct: 3    TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHI--------------------AA 42

Query: 1139 KKGNLGRVQKLL 1150
            + GNL  ++ LL
Sbjct: 43   ENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 53.1 bits (128), Expect = 7e-07
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)

Query: 5   DVVEYLLASGASIHARDDGGLHPLHNACS--FGHADVVRLLLEADANPNTRDNWNFTPLH 62
           DV++ L+ +GA ++A+D  G  PLH   S    +  V+RLLL   A+ N  D +  TPL 
Sbjct: 98  DVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLA 157

Length = 471

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 46.6 bits (111), Expect = 9e-07
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEA 479
           ++    DG  +TPLH AA Y  + +V++LL  G D+    N  D  G T L  A
Sbjct: 7   IDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDL----NLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 51.9 bits (125), Expect = 1e-06
 Identities = 62/269 (23%), Positives = 100/269 (37%), Gaps = 50/269 (18%)

Query: 3   RKDVVEYLLASGASIHARDDGGLHPLH----NACSFGHADVVRLLLEADANPNTRDNWNF 58
            KD+V  LL +GA ++A +  G  PLH    NA +    DV++LL++A A+ N +D    
Sbjct: 62  VKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATT---LDVIKLLIKAGADVNAKDKVGR 118

Query: 59  TPLHEAAAKGK---TDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH---KDRSC------ 106
           TPLH     G      V I +   + +  +   +YG+      P+    K R+       
Sbjct: 119 TPLH-VYLSGFNINPKV-IRLLLRKGADVNALDLYGMT-----PLAVLLKSRNANVELLR 171

Query: 107 -YLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNT 165
             +  GAD +  +   ++ L                 Q     +      +      + T
Sbjct: 172 LLIDAGADVYAVDDRFRSLL-------------HHHLQSFKPRARIVRELIRAGCDPAAT 218

Query: 166 SCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYG 225
               N  L   A  S S   S+         PL +  + + +      G  PLH A  + 
Sbjct: 219 DMLGNTPLHSMATGS-SCKRSLV-------LPLLIAGISINARN--RYGQTPLHYAAVFN 268

Query: 226 HFEVTEMLIKAGANVNAMDLWQFTPLHEA 254
           +      LI  GA++NA+     TPL   
Sbjct: 269 NPRACRRLIALGADINAVSSDGNTPLSLM 297

Length = 471

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 50.6 bits (120), Expect = 1e-06
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 9/109 (8%)

Query: 414 VVTRLLS--SCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKW 471
           V   LL   +   + N RD DG   TPLH+AA      +VE LL  GAD +S+++    +
Sbjct: 126 VAKLLLEAGADLDVNNLRDEDGN--TPLHWAALNGDADIVELLLEAGADPNSRNS----Y 179

Query: 472 GFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKL 520
           G T L  AA+ GR +L  LL L        L+   E     +++K   L
Sbjct: 180 GVTALDPAAKNGRIELVKLL-LDKGLHLSLLKFNLEGVANANVSKRNIL 227

Length = 235

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 52.6 bits (126), Expect = 1e-06
 Identities = 29/66 (43%), Positives = 34/66 (51%)

Query: 7   VEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAA 66
              LL  GA  + RD  G  PLH AC+ GH  VVR+LLE  A+P   D    TPL  A  
Sbjct: 98  ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157

Query: 67  KGKTDV 72
            G  +V
Sbjct: 158 NGFREV 163

Length = 664

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 24 GLHPLHNACSFGHADVVRLLLEADANPNTRDN 55
          G  PLH A   GH +VV+LLLEA A+ N RD 
Sbjct: 2  GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 51.2 bits (123), Expect = 2e-06
 Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 9/117 (7%)

Query: 707 TPLHCAVTSPY--PKRKAIVESLIRKGAHLNEKNKELLAPIHLAAD--LGHLDVLDTLLR 762
           TPLH      Y     K IV+ L+  GA++N  +   + P+  A         +++ LL 
Sbjct: 70  TPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLD 129

Query: 763 LGAKVNLVDVLGQTALHRTAR--DDKTQAVRVLLSHNADTSI---VSLLVIFSCSTN 814
            GA VN+ +  G+  LH          + +++L+    D +    V+ L+ +    N
Sbjct: 130 NGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPIN 186

Length = 422

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 45.2 bits (108), Expect = 2e-06
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKDN 466
           TPLH AA    + VV+ LL  GADV+++D 
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVAD 574
           G  PLH A   GH EV ++L++ GA+VN  D
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 50.8 bits (121), Expect = 3e-06
 Identities = 57/220 (25%), Positives = 88/220 (40%), Gaps = 33/220 (15%)

Query: 402 QLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGA-- 459
            L +A   G++ +  RLL    +  N    DG   +P+  A  +     ++ L+ HGA  
Sbjct: 5   ALCDAILFGELDIARRLLDIGIN-PNFEIYDG--ISPIKLAMKFRDSEAIKLLMKHGAIP 61

Query: 460 DVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRE-----LFEACKGGDL 514
           DV   D  +       LH+A ++G  +    L      A+D   +     L  A      
Sbjct: 62  DVKYPDIES------ELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLA------ 109

Query: 515 TKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVAD 574
           T +KKL   + + AR           F+    PLH A   G  +  E+L+ H A +++ D
Sbjct: 110 TILKKLDIMKLLIARGADPDIPNTDKFS----PLHLAVMMGDIKGIELLIDHKACLDIED 165

Query: 575 LWKFTPLHEAAA-------KALLQHGADINLKNTDGKTAL 607
               TPL  A A       K LL  GA+I+    +G  A 
Sbjct: 166 CCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAA 205

Length = 413

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 50.7 bits (121), Expect = 4e-06
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 5   DVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEA 64
           + ++ L   GA ++  DD G +P+H A      D+++LLLE  A  N +DN   +PLH A
Sbjct: 138 ESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNA 197

Query: 65  AAKG 68
           A  G
Sbjct: 198 AEYG 201

Length = 434

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 51.1 bits (122), Expect = 4e-06
 Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 10/159 (6%)

Query: 193 SPPQPLALETVIMPSGQAVALGL-VPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPL 251
           +P   L  E VI P    VA  L V L    + G      +L+  GA+ N  D    TPL
Sbjct: 63  TPDHNLTTEEVIDP---VVAHMLTVELCQLAASGDAVGARILLTGGADPNCRDYDGRTPL 119

Query: 252 HEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAP---TRELQQRLSNEFKGHCLLEA 308
           H A +   ++V  +LL  GADPTL +   K+ +++A     RE+ Q LS   + H  L A
Sbjct: 120 HIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGA 179

Query: 309 CRQGDP-SRVKKFLTSDVVNFKHPYTGDTPLP--GTLLI 344
             + D  +     L    ++  HP     P P  G+L++
Sbjct: 180 NAKPDSFTGKPPSLEDSPISSHHPDFSAVPQPMMGSLIV 218

Length = 664

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 50.4 bits (120), Expect = 4e-06
 Identities = 44/174 (25%), Positives = 68/174 (39%), Gaps = 45/174 (25%)

Query: 398 DLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH 457
           D+ES+L +A + GD+  V  LL       +    DG   TPLH A    ++ +++ L+A 
Sbjct: 67  DIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDG--MTPLHLATILKKLDIMKLLIAR 124

Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKV 517
           GAD       TDK  F+PLH A   G  +   LL                          
Sbjct: 125 GAD--PDIPNTDK--FSPLHLAVMMGDIKGIELL-------------------------- 154

Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVN 571
             + +   ++  D             G  PL  A + G   + +ML+  GAN++
Sbjct: 155 --IDHKACLDIED-----------CCGCTPLIIAMAKGDIAICKMLLDSGANID 195

Length = 413

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 50.0 bits (120), Expect = 5e-06
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 17/129 (13%)

Query: 4   KDVVEYLLASGASIHARDDGGLHPLHNACS--FGHADVVRLLLEADANPNTRDNWNFTPL 61
           K++V+ LL  GA+++A D+ G+ PL  A S       +V  LL+  AN N +++     L
Sbjct: 86  KEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLL 145

Query: 62  HEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDR-SCYLAHGADPFLKNQE 120
           H      K D+ I     +     N               K+R +  L++G    +K+  
Sbjct: 146 HLYLESNKIDLKILKLLIDKGVDINA--------------KNRVNYLLSYGVPINIKDVY 191

Query: 121 GQTPLDLTV 129
           G TPL   V
Sbjct: 192 GFTPLHYAV 200

Length = 422

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 44.1 bits (105), Expect = 5e-06
 Identities = 17/31 (54%), Positives = 22/31 (70%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMD 244
           G  PLH A   GH EV ++L++AGA+VNA D
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 50.0 bits (120), Expect = 6e-06
 Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 3/102 (2%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLD--VLDTLLR 762
             + LH  + S  P R  IV  LIR G      +     P+H  A        ++  LL 
Sbjct: 187 FRSLLHHHLQSFKP-RARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLI 245

Query: 763 LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVS 804
            G  +N  +  GQT LH  A  +  +A R L++  AD + VS
Sbjct: 246 AGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVS 287

Length = 471

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 48.7 bits (115), Expect = 6e-06
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 15/95 (15%)

Query: 532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA------ 585
              +        G +PLH+A S G  ++ ++L+  GA+VN  D    TPLH AA      
Sbjct: 61  IVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPP 120

Query: 586 ------AKALLQHGA---DINLKNTDGKTALDLAV 611
                 AK LL+ GA     NL++ DG T L  A 
Sbjct: 121 EGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAA 155

Length = 235

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 18/53 (33%), Positives = 28/53 (52%)

Query: 742 LAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
              +H AA  G L+++  LL  G  +N  D  G TALH  A +   + +++LL
Sbjct: 2   RTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 49.7 bits (118), Expect = 8e-06
 Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 48/176 (27%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
           VN RD   +  TP+H+AA  N V ++  LL +GAD+ +    + K G T LH        
Sbjct: 368 VNARDYCDK--TPIHYAAVRNNVVIINTLLDYGADIEA---LSQKIG-TALH-------- 413

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGL 545
                               F  C       VK L++ +  N        STPLH+A   
Sbjct: 414 --------------------FALCGTNPYMSVKTLID-RGANVNSKNKDLSTPLHYAC-- 450

Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPL-----HEAAAKALLQHGADI 596
                 C     +V EML+ +GA+VN  ++    PL     +      LL +GA++
Sbjct: 451 ---KKNCK---LDVIEMLLDNGADVNAINIQNQYPLLIALEYHGIVNILLHYGAEL 500

Length = 682

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 48.3 bits (114), Expect = 8e-06
 Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 11/117 (9%)

Query: 691 FLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAAD 750
              S+  + K     +  L  A +      K IV+       HL  ++ +   P+H AA 
Sbjct: 29  LDLSNPSDKKLNLYLELALLPAASLSELLLKLIVD------RHLAARDLDGRLPLHSAAS 82

Query: 751 LGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQ-----AVRVLLSHNADTSI 802
            G   ++  LL  GA VN  D  G T LH  A +           ++LL   AD  +
Sbjct: 83  KGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV 139

Length = 235

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 49.6 bits (118), Expect = 8e-06
 Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 14/119 (11%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPL-DLVREGD-Q 1122
            ++GA+VN+ D     P+H A      DI++LLL+ GA  + K+ +G +PL +    GD  
Sbjct: 145  EYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYA 204

Query: 1123 DVSDLLRGNSALLDAAKKG----------NLGRVQKLLTADNINCRDAQGRNSTPLHLA 1171
             +  L+   + +++  K G          N   ++ L+   +IN +D  G  STPLH A
Sbjct: 205  CIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDG--STPLHHA 261

Length = 434

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.8 bits (104), Expect = 8e-06
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAK 587
            LH A   G  E+ + L++ G ++N  D    T LH AA  
Sbjct: 4   ALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAEN 44

Length = 54

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 49.9 bits (119), Expect = 8e-06
 Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 21/149 (14%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPL-DLVREGDQ 1122
            +K   + ++ D    TPLH AA+KG  D V +LL+H  +   ++ +G T L + +     
Sbjct: 545  LKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHH 604

Query: 1123 DV----------SDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLA 1171
             +          SD       L  AAK+ +L  +++LL    N++  D QG  +T L +A
Sbjct: 605  KIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQG--ATALQVA 662

Query: 1172 AGEKRHLLMCRVTLGKSFLQFNAIKMAHA 1200
              E  H+ M R       L  N   +  A
Sbjct: 663  MAED-HVDMVR------LLIMNGADVDKA 684

Length = 823

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 49.3 bits (118), Expect = 9e-06
 Identities = 21/59 (35%), Positives = 30/59 (50%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G  PLH A    + E  + L+  GAN N ++ +  TPLH A   +  E+  LLL+ G  
Sbjct: 192 GFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS 250

Length = 422

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 48.3 bits (114), Expect = 9e-06
 Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 10/112 (8%)

Query: 1062 HNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLV-REG 1120
                     N+ D    TPLH AA  G ADIV LLL+ GADP+ +N  G T LD   + G
Sbjct: 132  EAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNG 191

Query: 1121 DQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLA 1171
              ++  LL          K  +L  ++  L    N N       N T L +A
Sbjct: 192  RIELVKLLL--------DKGLHLSLLKFNLEGVANANVSKRNILNLTSLIIA 235

Length = 235

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 49.4 bits (118), Expect = 9e-06
 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 5/56 (8%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAA-----KGKADIVRLLLQHGADPSKKNRDGATPL 1114
            +  GANVN  D    TPL    +     K   DIV++L+++GAD +KKN DG TPL
Sbjct: 58   INLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPL 113

Length = 489

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 48.9 bits (117), Expect = 1e-05
 Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADI--VRLLLQHGADPSKKNRDGATPLD------ 1115
            ++ GA+VN  DL+  TPL        A++  +RLL+  GAD    +    + L       
Sbjct: 139  LRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSF 198

Query: 1116 ---------LVREGDQDVSDLLRGNSALLDAAKKGNLGR--VQKLLTAD-NINCRDAQGR 1163
                     L+R G    +  + GN+ L   A   +  R  V  LL A  +IN R+  G+
Sbjct: 199  KPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQ 258

Query: 1164 NSTPLHLAAG 1173
              TPLH AA 
Sbjct: 259  --TPLHYAAV 266

Length = 471

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 49.3 bits (117), Expect = 1e-05
 Identities = 62/226 (27%), Positives = 90/226 (39%), Gaps = 54/226 (23%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVA-VVEYLLAHGADV 461
           LL+A +  D+   + LL      VN   +D   +TPLH A+    ++ +V  LL  GADV
Sbjct: 244 LLKAIRNEDLET-SLLLYDAGFSVN--SIDDCKNTPLHHASQAPSLSRLVPKLLERGADV 300

Query: 462 HSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLV 521
               NA +  G TPL+  A+ G                + +R L     G D+    +L 
Sbjct: 301 ----NAKNIKGETPLYLMAKNGYD-------------TENIRTLIM--LGADVNAADRLY 341

Query: 522 NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEM-LVKHGANVNVADLWKFTP 580
                                    PLH A +    +   + L++ GANVN  D    TP
Sbjct: 342 I-----------------------TPLHQASTLDRNKDIVITLLELGANVNARDYCDKTP 378

Query: 581 LHEAAAK-------ALLQHGADINLKNTDGKTALDLAVPCTRAVLS 619
           +H AA +        LL +GADI   +    TAL  A+  T   +S
Sbjct: 379 IHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMS 424

Length = 682

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 49.3 bits (117), Expect = 1e-05
 Identities = 71/270 (26%), Positives = 113/270 (41%), Gaps = 43/270 (15%)

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA- 584
           VNA+D      TP+H+AA           G+ ++  +L+ +GA+VN+  L   + L  A 
Sbjct: 171 VNAKDIYCI--TPIHYAA---------ERGNAKMVNLLLSYGADVNIIALDDLSVLECAV 219

Query: 585 ------AAKALLQHGADIN---------LKNTDGKTALDLAVPCTRAVLSGDHKKEELLE 629
                   KA++ + ++IN         ++N D +T+L L      +V S D  K   L 
Sbjct: 220 DSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSL-LLYDAGFSVNSIDDCKNTPLH 278

Query: 630 AARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVK 689
            A      L R    L                +    IK E   + + +     +  R  
Sbjct: 279 HA-SQAPSLSRLVPKLLERGAD----------VNAKNIKGETPLYLMAKNGYDTENIRTL 327

Query: 690 KFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAA 749
             L +DV      Y   TPLH A T    + K IV +L+  GA++N ++     PIH AA
Sbjct: 328 IMLGADVNAADRLY--ITPLHQAST--LDRNKDIVITLLELGANVNARDYCDKTPIHYAA 383

Query: 750 DLGHLDVLDTLLRLGAKVNLVDVLGQTALH 779
              ++ +++TLL  GA +  +     TALH
Sbjct: 384 VRNNVVIINTLLDYGADIEALSQKIGTALH 413

Length = 682

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 48.9 bits (116), Expect = 1e-05
 Identities = 21/44 (47%), Positives = 32/44 (72%)

Query: 229 VTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           + EML++ GA+VNA D++  TP+H AA +   ++ +LLLS GAD
Sbjct: 160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGAD 203

Length = 682

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 47.9 bits (113), Expect = 1e-05
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 23/117 (19%)

Query: 16  SIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIG 75
            + ARD  G  PLH+A S G   +V+LLL + A+ N +D    TPLH AA  G       
Sbjct: 65  HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPP---- 120

Query: 76  IYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAED 132
               E + +  + +   G               A      L++++G TPL       
Sbjct: 121 ----EGNIEVAKLLLEAG---------------ADLDVNNLRDEDGNTPLHWAALNG 158

Length = 235

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 49.2 bits (117), Expect = 1e-05
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 18/148 (12%)

Query: 5   DVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEA 64
           D+++ LL  GA  + +D+ G  PLHNA  +G    ++LL++   +   +    FTPLH A
Sbjct: 171 DIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNA 230

Query: 65  AAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH--------KD-RSCYLAHGADPF 115
               ++ + + I      + ++     I G T  P+H         D     L H AD  
Sbjct: 231 IIHNRSAIELLI------NNASINDQDIDGST--PLHHAINPPCDIDIIDILLYHKADIS 282

Query: 116 LKNQEGQTPLDLTVAEDVR-SLLQDAMA 142
           +K+ +G+ P+D       +  +++D +A
Sbjct: 283 IKDNKGENPIDTAFKYINKDPVIKDIIA 310

Length = 434

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 48.8 bits (116), Expect = 1e-05
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 676 LLEACRQGDPSRVKKFLTS----DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKG 731
           L +A  +GD   V++ L      D V +K    G TPLH A      K+  I++ LI +G
Sbjct: 72  LHDAVEEGDVKAVEELLDLGKFADDVFYK---DGMTPLHLATIL---KKLDIMKLLIARG 125

Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           A  +  N +  +P+HLA  +G +  ++ L+   A +++ D  G T L            +
Sbjct: 126 ADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICK 185

Query: 792 VLLSHNADTSIVS 804
           +LL   A+     
Sbjct: 186 MLLDSGANIDYFG 198

Length = 413

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 48.1 bits (115), Expect = 2e-05
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 16/160 (10%)

Query: 5   DVVEYLLASGASIHARDDGGLHPLHNACSFGH--ADVVRLLLEADANPNTRDNWNFTPLH 62
           +++  L+ +GA ++A DD     LH+        A +VR L+ A  +P   D    TPLH
Sbjct: 168 ELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLH 227

Query: 63  EAAAKGKTDVCIGIYFAEHSSKSN-QYVYGIGGGTGCPMH------KDRSCY--LAHGAD 113
             A        + +         N +  YG       P+H        R+C   +A GAD
Sbjct: 228 SMATGSSCKRSLVLPLLIAGISINARNRYGQT-----PLHYAAVFNNPRACRRLIALGAD 282

Query: 114 PFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAET 153
               + +G TPL L V  +    ++ A+A+ P A + A T
Sbjct: 283 INAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVAAT 322

Length = 471

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 48.0 bits (114), Expect = 2e-05
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 17/99 (17%)

Query: 1090 ADIVRLLLQHGADPSKKNRD-GATPLDLVREG-DQDVSDLL-----------RGN-SALL 1135
            A+I +LLL +GAD + K+R  G T L    E  DQ +++LL           + N S L 
Sbjct: 147  AEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLH 206

Query: 1136 DAAKKGNLGRVQKLL-TADNINCRDAQGRNSTPLHLAAG 1173
             A K  N   V  LL    + + RD  G  +TPLH++ G
Sbjct: 207  HAVKHYNKPIVHILLENGASTDARDKCG--NTPLHISVG 243

Length = 477

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 48.9 bits (116), Expect = 2e-05
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 10/118 (8%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPL--------- 1114
            ++ GA+VN  D++  TP+H AA +G A +V LLL +GAD +    D  + L         
Sbjct: 165  LEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNI 224

Query: 1115 DLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAA 1172
            D ++    + S++ + + +LL A +  +L     LL     +        +TPLH A+
Sbjct: 225  DTIKAIIDNRSNINKNDLSLLKAIRNEDL-ETSLLLYDAGFSVNSIDDCKNTPLHHAS 281

Length = 682

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 48.5 bits (115), Expect = 2e-05
 Identities = 82/341 (24%), Positives = 124/341 (36%), Gaps = 76/341 (22%)

Query: 6   VVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPN-------------- 51
           + E LL  GA ++A+D   + P+H A   G+A +V LLL   A+ N              
Sbjct: 160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAV 219

Query: 52  -------------TRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGC 98
                         R N N   L    A    D+   +   +     N     I      
Sbjct: 220 DSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNS----IDDCKNT 275

Query: 99  PMHKDRSC---------YLAHGADPFLKNQEGQTPLDLTV-----AEDVRSLLQDAMAQY 144
           P+H               L  GAD   KN +G+TPL L        E++R+L+       
Sbjct: 276 PLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIML----- 330

Query: 145 PGAP-SCAETASVPPPSQYSNT-----------SCGDNVSL-----PPPAQYSGSGGDSV 187
            GA  + A+   + P  Q S               G NV+        P  Y+    ++V
Sbjct: 331 -GADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVR-NNV 388

Query: 188 SLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQ 247
            +  T       +E +    G A+   L      C    +   + LI  GANVN+ +   
Sbjct: 389 VIINTLLDYGADIEALSQKIGTALHFAL------CGTNPYMSVKTLIDRGANVNSKNKDL 442

Query: 248 FTPLHEAASKS-RLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
            TPLH A  K+ +L+V  +LL  GAD    N  ++  + +A
Sbjct: 443 STPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIA 483

Length = 682

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 48.5 bits (116), Expect = 2e-05
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 5/89 (5%)

Query: 3   RKDVVEYLLASGASIHARDDGGLHPLHNACSFGHA-----DVVRLLLEADANPNTRDNWN 57
             DVV+ LL +GA I++       PLH   +  +      ++V+LLLE  AN N  DN  
Sbjct: 47  NIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNG 106

Query: 58  FTPLHEAAAKGKTDVCIGIYFAEHSSKSN 86
            TPL  A +K      I  Y  ++ +  N
Sbjct: 107 ITPLLYAISKKSNSYSIVEYLLDNGANVN 135

Length = 422

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 47.7 bits (114), Expect = 3e-05
 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 5  DVVEYLLASGASIHARDDGGLHPLHNACSFGH---ADVVRLLLEADANPNTRDNWNFTPL 61
          + V  LLA+GA ++ R + G  PLH    +      D+VRLLLEA A+ N  +   FTPL
Sbjct: 28 EEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPL 87

Query: 62 H 62
          H
Sbjct: 88 H 88

Length = 471

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 48.0 bits (114), Expect = 3e-05
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 1036 QLSMAGGLETGTKKKKKN---MYYGT------LTPHNVKHGANVNVADLWKFTPLHEAAA 1086
            +L ++ G +   K + K    ++Y T      LT   + +GANVN+ D    +PLH A  
Sbjct: 151  KLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVK 210

Query: 1087 KGKADIVRLLLQHGADPSKKNRDGATPL 1114
                 IV +LL++GA    +++ G TPL
Sbjct: 211  HYNKPIVHILLENGASTDARDKCGNTPL 238

Length = 477

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 48.1 bits (114), Expect = 3e-05
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 7/75 (9%)

Query: 707 TPLHCAV--TSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLG-HLDVLDTLLRL 763
           T LH A+  T+PY      V++LI +GA++N KNK+L  P+H A      LDV++ LL  
Sbjct: 410 TALHFALCGTNPYMS----VKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDN 465

Query: 764 GAKVNLVDVLGQTAL 778
           GA VN +++  Q  L
Sbjct: 466 GADVNAINIQNQYPL 480

Length = 682

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 47.7 bits (114), Expect = 3e-05
 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 18/83 (21%)

Query: 214 GLVPLHNACSYGH--FEVTEMLIKAGANVNAM----------------DLWQFTPLHEAA 255
           G   LH          ++ ++LI  G ++NA                 D++ FTPLH A 
Sbjct: 141 GENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAV 200

Query: 256 SKSRLEVCSLLLSEGADPTLHNC 278
             +  E    LL  GA+P L N 
Sbjct: 201 YNNNPEFVKYLLDLGANPNLVNK 223

Length = 422

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 47.7 bits (113), Expect = 3e-05
 Identities = 71/322 (22%), Positives = 116/322 (36%), Gaps = 81/322 (25%)

Query: 512 GDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVN 571
           GD+  ++K++  +  N  + +  ++T         PL +A   G  ++ E+ +KHGA++N
Sbjct: 12  GDIEAIEKIIKNKG-NCINISVDETT--------TPLIDAIRSGDAKIVELFIKHGADIN 62

Query: 572 VADLWKFTPLHEA------------------------------AAKALLQHGADINLKNT 601
             +     PL  A                                K +L  G D+N+K+ 
Sbjct: 63  HINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDA 122

Query: 602 DGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMEL 661
           + KT L  A+            K+  LE+ +M    L  Y   +   D   C        
Sbjct: 123 ELKTFLHYAI------------KKGDLESIKM----LFEYGADVNIEDDNGC-------- 158

Query: 662 MFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRK 721
                    +  H    A +      +K  L            G++PLH A    Y    
Sbjct: 159 ---------YPIHI---AIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAE--YGDYA 204

Query: 722 AIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRT 781
            I + LI  G H+  K K    P+H A  + +   ++ L+   A +N  D+ G T LH  
Sbjct: 205 CI-KLLIDHGNHIMNKCKNGFTPLHNAI-IHNRSAIELLIN-NASINDQDIDGSTPLHHA 261

Query: 782 ARDD-KTQAVRVLLSHNADTSI 802
                    + +LL H AD SI
Sbjct: 262 INPPCDIDIIDILLYHKADISI 283

Length = 434

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 241 NAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA-------PTRELQ 293
           NA D    TPLH AAS   LEV  LLL  GAD    +   ++ + +A         + L 
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 294 QR-----LSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPL 338
           ++       ++     L  A R G+   VK  L            G TPL
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPL 110

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 47.6 bits (113), Expect = 4e-05
 Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 38/108 (35%)

Query: 542 AAGLVPLHNACSYGHYEVTEMLVKHGANVNVAD------LWK---------FTPLHEAAA 586
           + G  PLH A S G+ +   +L+KH  NV++ D      LW          F  L+  A+
Sbjct: 556 SKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFAS 615

Query: 587 -----------------------KALLQHGADINLKNTDGKTALDLAV 611
                                  K LL+ G +++ ++  G TAL +A+
Sbjct: 616 ISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAM 663

Length = 823

>gnl|CDD|188920 cd09521, SAM_ASZ1, SAM domain of ASZ1 subfamily

 Score = 42.3 bits (100), Expect = 4e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query: 815 LGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           L L HL  LF+   +T   L +M  EDL+++G++  G + K+L  I+++
Sbjct: 15  LELGHLTPLFKEHDVTFSQLLKMTEEDLEKIGITQPGDQKKILDAIKEV 63

SAM (sterile alpha motif) domain of ASZ1 (Ankyrin, SAM, leucine Zipper) also known as GASZ (Germ cell-specific Ankyrin, SAM, leucine Zipper) subfamily is a potential protein-protein interaction domain. Proteins of this group are involved in the repression of transposable elements during spermatogenesis, oogenesis, and preimplantation embryogenesis. They support synthesis of PIWI-interacting RNA via association with some PIWI proteins, such as MILI and MIWI. This association is required for initiation and maintenance of retrotransposon repression during the meiosis. In mice lacking ASZ1, DNA damage and delayed germ cell maturation was observed due to retrotransposons releasing from their repressed state. Length = 64

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 46.9 bits (112), Expect = 5e-05
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEA-AQKGR 484
           +N R+  G+  TPLH+AA +N       L+A GAD+    NA    G TPL         
Sbjct: 250 INARNRYGQ--TPLHYAAVFNNPRACRRLIALGADI----NAVSSDGNTPLSLMVRNNNG 303

Query: 485 TQLSALLPLSPSA 497
             + A L  +PSA
Sbjct: 304 RAVRAALAKNPSA 316

Length = 471

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 46.9 bits (112), Expect = 5e-05
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 9/79 (11%)

Query: 214 GLVPLH----NACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHE-AASKS-RLEVCSLLL 267
           G  PLH    NA +    +V ++LIKAGA+VNA D    TPLH   +  +   +V  LLL
Sbjct: 83  GFTPLHLYLYNATT---LDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLL 139

Query: 268 SEGADPTLHNCHSKSAIDV 286
            +GAD    + +  + + V
Sbjct: 140 RKGADVNALDLYGMTPLAV 158

Length = 471

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 233 LIKAG-ANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
           L++ G  ++NA D    TPLH AA    LE+   LL  G D  L +    +A+D+A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 46.6 bits (111), Expect = 6e-05
 Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGK---ADIVRLLLQHGADPSKKNRDGATPLDLVREG 1120
            +  GA+VN    +  TPLH           DIVRLLL+ GAD +   R G TPL L    
Sbjct: 34   LAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYN 93

Query: 1121 DQ--DVSDLLRGNSALLDAAKKGNLGR--VQKLLTADNIN 1156
                DV  LL    A  D   K  +GR  +   L+  NIN
Sbjct: 94   ATTLDVIKLLIKAGA--DVNAKDKVGRTPLHVYLSGFNIN 131

Length = 471

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 46.8 bits (111), Expect = 6e-05
 Identities = 68/310 (21%), Positives = 104/310 (33%), Gaps = 74/310 (23%)

Query: 501 PLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAG---------LVPLHNA 551
           P   L +A +  +L  VK L+  +  N      R  TPLH             ++   N 
Sbjct: 37  PFIPLHQAVEARNLDVVKSLLT-RGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINK 95

Query: 552 CSYGHYEVTEMLVKHGANVNVA--------------------DLWKFTPLHEAAAKALLQ 591
           CS  +  V      +  NV +                        K   +     K LL 
Sbjct: 96  CSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLS 155

Query: 592 HGADINLKNTD-GKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDI 650
           +GADIN+K+   G TAL  A          ++K + L E     G               
Sbjct: 156 YGADINMKDRHKGNTALHYA---------TENKDQRLTELLLSYGAN------------- 193

Query: 651 GWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPL 709
                           I D+     L  A +  +   V   L +    + +    G+TPL
Sbjct: 194 --------------VNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKC-GNTPL 238

Query: 710 HCAVTSPYPKRKAIVESLIRKGAHLNEKNKEL-LAPIHLAADLGHLDVLDTLLRLGAKVN 768
           H +V   Y K   I++ L+  G  +N K+  L L  +H +  +     L  LL  GA +N
Sbjct: 239 HISVG--YCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADIN 294

Query: 769 LVDVLGQTAL 778
            ++    T L
Sbjct: 295 SLNSYKLTPL 304

Length = 477

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 47.2 bits (112), Expect = 6e-05
 Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)

Query: 432 DGRHSTPLHFAA--GYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSA 489
           D +  TPLH AA  GY    +V  LL H  +VH +D      G T L  A      ++  
Sbjct: 555 DSKGRTPLHIAASKGYEDCVLV--LLKHACNVHIRDAN----GNTALWNAISAKHHKIFR 608

Query: 490 LLPLSPSAANDPLRE---LFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLV 546
           +L    ++ +DP      L  A K  DLT +K+L+  Q +N  D+   +        G  
Sbjct: 609 IL-YHFASISDPHAAGDLLCTAAKRNDLTAMKELLK-QGLNV-DSEDHQ--------GAT 657

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLW-KFTP--LHEAAAKALLQHGADINLKNTDG 603
            L  A +  H ++  +L+ +GA+V+ A+    F+P  L E   K  L H           
Sbjct: 658 ALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQKRELGH----------- 706

Query: 604 KTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWP 644
                + +  +      D  ++      R+ G        P
Sbjct: 707 ----SITIVDSVPADEPDLGRDGGSRPGRLQGTSSDNQCRP 743

Length = 823

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 18/34 (52%), Positives = 23/34 (67%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLL 1097
            +KHGA+VN  D    TPLH AA  G  ++V+LLL
Sbjct: 93   LKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 46.1 bits (109), Expect = 8e-05
 Identities = 20/57 (35%), Positives = 29/57 (50%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           PLH A   G  +  E+LI   A ++  D    TPL  A +K  + +C +LL  GA+ 
Sbjct: 138 PLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI 194

Length = 413

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 46.1 bits (109), Expect = 9e-05
 Identities = 63/277 (22%), Positives = 104/277 (37%), Gaps = 48/277 (17%)

Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA-------AAKALLQHGADINL 598
           V L +A  +G  ++   L+  G N N       +P+  A       A K L++HGA  ++
Sbjct: 4   VALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDV 63

Query: 599 KNTDGKTALDLAVPCTRAVLSGDHKK-EELLEAARMMGGGLHRYTWPLGTTDIGWCSCCC 657
           K  D ++          AV  GD K  EELL     +G       +  G T +   +   
Sbjct: 64  KYPDIES------ELHDAVEEGDVKAVEELL----DLGKFADDVFYKDGMTPLHLATILK 113

Query: 658 KMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPY 717
           K+++M             L+      D     KF               +PLH AV    
Sbjct: 114 KLDIM-----------KLLIARGADPDIPNTDKF---------------SPLHLAVMM-- 145

Query: 718 PKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQ-T 776
                 +E LI   A L+ ++     P+ +A   G + +   LL  GA ++     G   
Sbjct: 146 -GDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVA 204

Query: 777 ALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCST 813
           AL     ++K   VR+ +   AD +I+ ++    C+ 
Sbjct: 205 ALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTI 241

Length = 413

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 45.6 bits (108), Expect = 1e-04
 Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 26/180 (14%)

Query: 5   DVVEYLLASGASIHARD-DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHE 63
           ++ + LL+ GA I+ +D   G   LH A       +  LLL   AN N  D  N +PLH 
Sbjct: 148 EITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHH 207

Query: 64  AAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH------KDRSC---YLAHGADP 114
           A       + + I     +S   +   G       P+H      KD       L HG D 
Sbjct: 208 AVKHYNKPI-VHILLENGASTDARDKCG-----NTPLHISVGYCKDYDILKLLLEHGVDV 261

Query: 115 FLKNQ-EGQTPLDLTV-AEDVRSLLQDAMAQYPGAPSCAETASVPPPS----QYSNTSCG 168
             K+   G T L  ++ +E    LL     +Y    +   +  + P S    QY   + G
Sbjct: 262 NAKSYILGLTALHSSIKSERKLKLL----LEYGADINSLNSYKLTPLSSAVKQYLCINIG 317

Length = 477

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 45.8 bits (109), Expect = 1e-04
 Identities = 51/240 (21%), Positives = 79/240 (32%), Gaps = 81/240 (33%)

Query: 228 EVTEMLIKAGANVNAMDLWQFTPLHEAASKSR--LEVCSLLLSEGADPTLHNCHSKSAID 285
           E+ ++L++ GANVNA D    TPL  A SK      +   LL  GA+  + N   ++ + 
Sbjct: 87  EIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLL- 145

Query: 286 VAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLPGT--- 341
                            H  LE+ +  D   +K  +   V +N K               
Sbjct: 146 -----------------HLYLESNKI-DLKILKLLIDKGVDINAK-----------NRVN 176

Query: 342 LLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLES 401
            L+         I + +                G+T L  A  N+       P  V    
Sbjct: 177 YLLSYGVP----INIKDVY--------------GFTPLHYAVYNNN------PEFVKY-- 210

Query: 402 QLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADV 461
            LL+   G +               N  +  G   TPLH A   N   + + LL +G  +
Sbjct: 211 -LLD--LGAN--------------PNLVNKYG--DTPLHIAILNNNKEIFKLLLNNGPSI 251

Length = 422

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 1078 FTPLHEAAAKGKADIVRLLLQHGADP 1103
             TPLH AA  G  ++V+LLL  GAD 
Sbjct: 3    RTPLHLAAENGNLEVVKLLLDKGADI 28

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 45.1 bits (106), Expect = 2e-04
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 723 IVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTA 782
           I E L+  GA +N K+   + PIH AA+ G+  +++ LL  GA VN++ +   + L    
Sbjct: 160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAV 219

Query: 783 RDDKTQAVRVLLSH--NADTSIVSLL 806
                  ++ ++ +  N + + +SLL
Sbjct: 220 DSKNIDTIKAIIDNRSNINKNDLSLL 245

Length = 682

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 44.4 bits (104), Expect = 2e-04
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 15/79 (18%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLE--------------- 45
            G  D+VE LL +GA  ++R+  G+  L  A   G  ++V+LLL+               
Sbjct: 157 NGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFNLEGV 216

Query: 46  ADANPNTRDNWNFTPLHEA 64
           A+AN + R+  N T L  A
Sbjct: 217 ANANVSKRNILNLTSLIIA 235

Length = 235

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 44.0 bits (103), Expect = 2e-04
 Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 34/160 (21%)

Query: 1062 HNVKHGANVNVADLWKFTPLHEAAAKGK-----ADIVRLLLQHGA---DPSKKNRDGATP 1113
              +  GA+VN  D    TPLH AA  G       ++ +LLL+ GA     + ++ DG TP
Sbjct: 91   LLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTP 150

Query: 1114 LDL-VREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAA 1172
            L      GD D+ +LL    A                    + N R++ G   T L  AA
Sbjct: 151  LHWAALNGDADIVELLLEAGA--------------------DPNSRNSYGV--TALDPAA 188

Query: 1173 GEKRH---LLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMG 1209
               R     L+    L  S L+FN   +A+A     +++ 
Sbjct: 189  KNGRIELVKLLLDKGLHLSLLKFNLEGVANANVSKRNILN 228

Length = 235

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 45.3 bits (107), Expect = 2e-04
 Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 32/123 (26%)

Query: 35  GHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGG 94
           G A   R+LL   A+PN RD    TPLH A A G   V                      
Sbjct: 93  GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVV--------------------- 131

Query: 95  GTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETA 154
                        L  GADP L +++G+TPL+L      R ++Q  ++++          
Sbjct: 132 ----------RVLLEFGADPTLLDKDGKTPLELAEENGFREVVQ-LLSRHSQCHFELGAN 180

Query: 155 SVP 157
           + P
Sbjct: 181 AKP 183

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 45.3 bits (107), Expect = 2e-04
 Identities = 22/70 (31%), Positives = 36/70 (51%)

Query: 727 LIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDK 786
           L+  GA  N ++ +   P+H+A   GH+ V+  LL  GA   L+D  G+T L     +  
Sbjct: 101 LLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGF 160

Query: 787 TQAVRVLLSH 796
            + V++L  H
Sbjct: 161 REVVQLLSRH 170

Length = 664

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 45.0 bits (106), Expect = 2e-04
 Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLLRGNSALLD 1136
            TPLH A    K DI++LL+  GADP   N D  +PL L V  GD    +LL  + A LD
Sbjct: 104  TPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD 162

Length = 413

>gnl|CDD|188932 cd09533, SAM_Ste50-like_fungal, SAM domain of Ste50_like (ubc2) subfamily

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 18/46 (39%), Positives = 30/46 (65%)

Query: 815 LGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGI 860
           LGL    + F    IT D+L  ++HEDLK++G+++ G+R  +LK +
Sbjct: 9   LGLPQYEDQFIENGITGDVLVALDHEDLKEMGITSVGHRLTILKAV 54

SAM (sterile alpha motif) domain of Ste50-like (or Ubc2 for Ustilago bypass of cyclase) subfamily is a putative protein-protein interaction domain. This group includes only fungal proteins. Basidiomycetes have an N-terminal SAM domain, central UBQ domain, and C-terminal SH3 domain, while Ascomycetes lack the SH3 domain. Ubc2 of Ustilago maydis is a major virulence and maize pathogenicity factor. It is required for filamentous growth (the budding haploid form of Ustilago maydis is a saprophyte, while filamentous dikaryotic form is a pathogen). Also the Ubc2 protein is involved in the pheromone-responsive morphogenesis via the MAP kinase cascade. The SAM domain is necessary for ubc2 function; deletion of SAM eliminates this function. A Lys-to-Glu mutation in the SAM domain of ubc2 gene induces temperature sensitivity. Length = 58

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVH 462
           TPLH AA    + +V+ LL HGAD++
Sbjct: 4   TPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|216040 pfam00644, PARP, Poly(ADP-ribose) polymerase catalytic domain

 Score = 43.5 bits (103), Expect = 2e-04
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 18/95 (18%)

Query: 873 GTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVH 932
              L  L  D +E+  + + + +T     D    G +F    I+ I +VQ    W+R+  
Sbjct: 2   KCSLEPLDKDSEEYKIIEKYLLST----HDPTHGGPLF----ILEIFRVQREGEWDRF-- 51

Query: 933 RRAEVADENGGQAHERMLFHGSP--FINAIVQKGF 965
                   +    + R+L+HGS       I+ +G 
Sbjct: 52  ------QPHKKLRNRRLLWHGSRLTNFAGILSQGL 80

Poly(ADP-ribose) polymerase catalyzes the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component induced by DNA damage. The carboxyl-terminal region is the most highly conserved region of the protein. Experiments have shown that a carboxyl 40 kDa fragment is still catalytically active. Length = 206

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 44.9 bits (106), Expect = 3e-04
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 3   RKDVVEYLLASGASIHARDDGGLHPLHNACSF-GHADVVRLLLEADANPNTRDN-WNFTP 60
            K +V  LL +GAS  ARD  G  PLH +  +    D+++LLLE   + N +      T 
Sbjct: 213 NKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTA 272

Query: 61  LHEA 64
           LH +
Sbjct: 273 LHSS 276

Length = 477

>gnl|CDD|188907 cd09508, SAM_HD, SAM domain of HD-phosphohydrolase

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 20/52 (38%), Positives = 30/52 (57%)

Query: 815 LGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSS 866
            G   LLE+F   +IT   L ++    L+++GVS+ G R KLLK ++KL   
Sbjct: 19  FGEPELLEIFRENEITGAHLPDLTESRLEKLGVSSLGERLKLLKCLQKLSQI 70

SAM (sterile alpha motif) domain of SAM_HD subfamily proteins is a putative protein-protein interaction domain. Proteins of this group, additionally to the SAM domain, contain a HD hydrolase domain. Human SAM-HD1 is a nuclear protein involved in innate immune response and may act as a negative regulator of the cell-intrinsic antiviral response. Mutations in this gene lead to Aicardi-Goutieres syndrome (symptoms include cerebral atrophy, leukoencephalopathy, hepatosplenomegaly, and increased production of alpha-interferon). Length = 70

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 44.3 bits (104), Expect = 4e-04
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 19/123 (15%)

Query: 1067 GANVNVADLWKFTPLHEAA-AKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVS 1125
            G +VN  D  K TPLH A+ A   + +V  LL+ GAD + KN  G TPL L+ +   D  
Sbjct: 263  GFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTE 322

Query: 1126 DL--LRGNSALLDAAKKGNLGRVQKLLTAD--------------NINCRDAQGRNSTPLH 1169
            ++  L    A ++AA +  +  + +  T D              N+N RD   +  TP+H
Sbjct: 323  NIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDK--TPIH 380

Query: 1170 LAA 1172
             AA
Sbjct: 381  YAA 383

Length = 682

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 43.8 bits (103), Expect = 4e-04
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 14/118 (11%)

Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVS 1125
            G +VN+ D    T LH A  KG  + +++L ++GAD + ++ +G  P+ + ++    D+ 
Sbjct: 114  GIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDII 173

Query: 1126 DLL------------RGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLA 1171
             LL             G S L +AA+ G+   ++ L+   N +  +      TPLH A
Sbjct: 174  KLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGN-HIMNKCKNGFTPLHNA 230

Length = 434

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 43.5 bits (103), Expect = 5e-04
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 8/64 (12%)

Query: 217 PLHNACSYG---HFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSR---LEVCSLLLSEG 270
           PLH     G   + +V  +L++ GA+VNA+DL+  TPL     KSR   +E+  LL+  G
Sbjct: 120 PLH-VYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLA-VLLKSRNANVELLRLLIDAG 177

Query: 271 ADPT 274
           AD  
Sbjct: 178 ADVY 181

Length = 471

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLL 761
           G T LH A  S   +   +V+ L+ KG  +N  +++    +H+AA+ G+L+VL  LL
Sbjct: 1   GRTALHKAAISGRLE---LVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 24 GLHPLHNACSFGHADVVRLLLEADANPN 51
          G  PLH A   G+ +VV+LLL+  A+ N
Sbjct: 2  GRTPLHLAAENGNLEVVKLLLDKGADIN 29

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNV 572
           PLH A   G+ EV ++L+  GA++N 
Sbjct: 5   PLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 11/26 (42%), Positives = 19/26 (73%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNV 572
           PLH A   G+ E+ ++L++HGA++N 
Sbjct: 5   PLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 11/26 (42%), Positives = 19/26 (73%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNA 242
           PLH A   G+ E+ ++L++ GA++NA
Sbjct: 5   PLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 43.5 bits (102), Expect = 6e-04
 Identities = 23/56 (41%), Positives = 31/56 (55%)

Query: 7   VEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLH 62
           VE LL  G S +  DD G +PLH A    +  +V +LL   A+PN  D  + TPL+
Sbjct: 55  VEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLY 110

Length = 446

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLL 455
           L +A+  G + +V  LL      +N  D DG   T LH AA    + V++ LL
Sbjct: 5   LHKAAISGRLELVKYLLEK-GVDINRTDEDGN--TALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|188918 cd09519, SAM_ANKS3, SAM domain of ANKS3 subfamily

 Score = 39.0 bits (91), Expect = 7e-04
 Identities = 15/52 (28%), Positives = 27/52 (51%)

Query: 814 NLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCS 865
            +G    L +FE + I L I   +   DLK++G++ +G + K+   I +  S
Sbjct: 13  QIGCSKYLPIFEEQDIDLRIFLTLTESDLKEIGITLFGPKRKMTSAIARWHS 64

SAM (sterile alpha motif) domain of ANKS3 subfamily is a potential protein-protein interaction domain. Proteins of this subfamily have N-terminal ankyrin repeats and a C-terminal SAM domain. SAM is a widespread domain in signaling proteins. In many cases it mediates homo-dimerization/oligomerization. Length = 64

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.5 bits (88), Expect = 8e-04
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 248 FTPLHEAASKSRLEVCSLLLSEGADPTLHN 277
            TPLH AA    LEV  LLL  GAD    +
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 38.1 bits (89), Expect = 9e-04
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 727 LIRKG-AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALH 779
           L+  G   LN  +     P+HLAA  G L+++  LL+ G  +NL D  G TAL 
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALD 54

Length = 56

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 37.6 bits (88), Expect = 9e-04
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 24 GLHPLHNACSFGHADVVRLLLEADANPNT 52
          G  PLH A   G+ ++V+LLLE  A+ N 
Sbjct: 2  GNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 42.7 bits (100), Expect = 0.001
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 733 HLNEKNK--ELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAV 790
           H ++ N+  E +  I        L + + LL  GA VN  D+   T +H  A     + V
Sbjct: 135 HYDKINESIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMV 194

Query: 791 RVLLSHNADTSIVSL--LVIFSCSTN 814
            +LLS+ AD +I++L  L +  C+ +
Sbjct: 195 NLLLSYGADVNIIALDDLSVLECAVD 220

Length = 682

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 7/40 (17%)

Query: 579 TPLHEAAA-------KALLQHGADINLKNTDGKTALDLAV 611
           T LH+AA        K LL+ G DIN  + DG TAL +A 
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAA 42

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.1 bits (87), Expect = 0.001
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 744 PIHLAADLGHLDVLDTLLRLGAKVNLVD 771
           P+HLAA  GHL+V+  LL  GA VN  D
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 42.5 bits (100), Expect = 0.001
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 12/62 (19%)

Query: 558 EVTEMLVKHGANVNVADLWKFTPL---------HEAA---AKALLQHGADINLKNTDGKT 605
           ++ ++ +  GANVN  D    TPL         ++      K L+++GADIN KN+DG+T
Sbjct: 52  DIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGET 111

Query: 606 AL 607
            L
Sbjct: 112 PL 113

Length = 489

>gnl|CDD|188933 cd09534, SAM_Ste11_fungal, SAM domain of Ste11_fungal subfamily

 Score = 38.3 bits (90), Expect = 0.001
 Identities = 19/49 (38%), Positives = 32/49 (65%)

Query: 815 LGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           L     L++FE+  IT D+L E++ E LK++G++  G R +LL+ I+ L
Sbjct: 13  LNCGQYLDIFEKNLITGDLLLELDKEALKELGITKVGDRIRLLRAIKSL 61

SAM (sterile alpha motif) domain of Ste11 subfamily is a protein-protein interaction domain. Proteins of this subfamily have SAM domain at the N-terminus and protein kinase domain at the C-terminus. They participate in regulation of mating pheromone response, invasive growth and high osmolarity growth response. MAP triple kinase Ste11 from S.cerevisia is known to interact with Ste20 kinase and Ste50 regulator. These kinases are able to form homodimers interacting through their SAM domains as well as heterodimers or heterogenous complexes when either SAM domain of monomeric or homodimeric form of Ste11 interacts with Ste50 regulator. Length = 62

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 42.2 bits (99), Expect = 0.002
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 214 GLVPLHNACSY-GHFEVTEMLIKAGANVNAMD-LWQFTPLHEAASKSRLEVCSLLLSEGA 271
           G  PLH +  Y   +++ ++L++ G +VNA   +   T LH +    R     LLL  GA
Sbjct: 234 GNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIKSER--KLKLLLEYGA 291

Query: 272 DPTLHNCHSKSAIDVA 287
           D    N +  + +  A
Sbjct: 292 DINSLNSYKLTPLSSA 307

Length = 477

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 41.3 bits (96), Expect = 0.002
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEG 270
           G  PLH A   G  ++ E+L++AGA+ N+ + +  T L  AA   R+E+  LLL +G
Sbjct: 147 GNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203

Length = 235

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 1130 GNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
            G +AL  AA  G L  V+ LL    +IN  D  G   T LH+AA
Sbjct: 1    GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGN--TALHIAA 42

Length = 54

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 42.2 bits (99), Expect = 0.002
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           G   ++E LL +       D  G  PLH A S G+ D V +LL+   N + RD    T L
Sbjct: 536 GNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTAL 595

Query: 62  HEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSC-----YLAHGADPFL 116
             A +     +   +Y    +S S+ +     G   C   K          L  G +   
Sbjct: 596 WNAISAKHHKIFRILY--HFASISDPH---AAGDLLCTAAKRNDLTAMKELLKQGLNVDS 650

Query: 117 KNQEGQTPLDLTVAED 132
           ++ +G T L + +AED
Sbjct: 651 EDHQGATALQVAMAED 666

Length = 823

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 41.2 bits (97), Expect = 0.003
 Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 4/60 (6%)

Query: 217 PLHNACSYGHFEVTEM---LIKAGANVNAMDLWQFTPLH-EAASKSRLEVCSLLLSEGAD 272
           PLH    Y   +V ++   L++AGA+VNA +   FTPLH    + + L+V  LL+  GAD
Sbjct: 50  PLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGAD 109

Length = 471

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 41.1 bits (96), Expect = 0.003
 Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 15/138 (10%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +G  D+   LL  G + +     G+ P+  A  F  ++ ++LL++  A P+ +     + 
Sbjct: 12  FGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESE 71

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTG-CPMH--------KDRSCYLAHG 111
           LH+A  +G       +   E      ++   +    G  P+H              +A G
Sbjct: 72  LHDAVEEGD------VKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARG 125

Query: 112 ADPFLKNQEGQTPLDLTV 129
           ADP + N +  +PL L V
Sbjct: 126 ADPDIPNTDKFSPLHLAV 143

Length = 413

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 36.0 bits (84), Expect = 0.003
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNA 242
           PLH A   G+ EV ++L+  GA++NA
Sbjct: 5   PLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 15/25 (60%), Positives = 19/25 (76%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADP 1103
            TPLH AA  G  ++V+LLL+HGAD 
Sbjct: 4    TPLHLAARNGNLELVKLLLEHGADI 28

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 41.6 bits (98), Expect = 0.003
 Identities = 67/279 (24%), Positives = 94/279 (33%), Gaps = 66/279 (23%)

Query: 374 GGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDG 433
           G   ++    E  KKL    P  +   S L  A+   +   +T LL +    ++CR   G
Sbjct: 28  GDLASVYRDLEEPKKLNINCPDRLG-RSALFVAAIENENLELTELLLN----LSCRGAVG 82

Query: 434 RHSTPLHFAAGYNRVAVVEYLLAHGADVHSK--------DNATDKW--GFTPLHEAAQKG 483
              T LH A     V  VE +L H      K        D  T ++  G T LH AA + 
Sbjct: 83  D--TLLH-AISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQ 139

Query: 484 RTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAA 543
             ++  LL      A+ P R       G    K +           D+     +PL+ AA
Sbjct: 140 NYEIVKLLLE--RGASVPAR-----ACGDFFVKSQG---------VDSFYHGESPLNAAA 183

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH----EAAAKA----------- 588
            L         G   +  +L +  A++  AD    T LH    E   KA           
Sbjct: 184 CL---------GSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYN 234

Query: 589 -LLQHGADIN-------LKNTDGKTALDLAVPCTRAVLS 619
             L     +        + N  G T L LA    R VL 
Sbjct: 235 FALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLF 273

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 41.6 bits (98), Expect = 0.003
 Identities = 53/237 (22%), Positives = 78/237 (32%), Gaps = 59/237 (24%)

Query: 398 DLESQLLEASKGGDMTVVTR-LLSSCPHIVNCRDLDGRHSTPLHFAAGYNRV-AVVEYLL 455
           D E   L A++ GD+  V R L       +NC D  GR  + L  AA  N    + E LL
Sbjct: 16  DEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGR--SALFVAAIENENLELTELLL 73

Query: 456 AHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLT 515
                    D          LH  + +                     +  EA     L 
Sbjct: 74  NLSCRGAVGDTL--------LHAISLE-------------------YVDAVEAILLHLLA 106

Query: 516 KVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVA-- 573
             +K    +  N + T+        F  G+  LH A    +YE+ ++L++ GA+V     
Sbjct: 107 AFRKSGPLELANDQYTS-------EFTPGITALHLAAHRQNYEIVKLLLERGASVPARAC 159

Query: 574 ----------DLWKFTPLHEAAAKA---------LLQHGADINLKNTDGKTALDLAV 611
                     D +        AA           L +  ADI   ++ G T L L V
Sbjct: 160 GDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLV 216

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 40.7 bits (95), Expect = 0.004
 Identities = 22/69 (31%), Positives = 32/69 (46%)

Query: 5   DVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEA 64
           D+++ L+A GA     +     PLH A   G    + LL++  A  +  D    TPL  A
Sbjct: 116 DIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIA 175

Query: 65  AAKGKTDVC 73
            AKG   +C
Sbjct: 176 MAKGDIAIC 184

Length = 413

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 35.6 bits (83), Expect = 0.004
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVH 462
           TPLH AA    + VV+ LL  GAD++
Sbjct: 4   TPLHLAAENGNLEVVKLLLDKGADIN 29

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	1236
KOG4177|consensus	1143		100.0
KOG4177|consensus	1143		100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
KOG0510|consensus	929		100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
KOG0510|consensus	929		100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		100.0
KOG4412|consensus	226		99.98
PHA02875	413	ankyrin repeat protein; Provisional	99.98
PHA02875	413	ankyrin repeat protein; Provisional	99.97
PHA02798	489	ankyrin-like protein; Provisional	99.97
KOG4369|consensus	2131		99.97
KOG4369|consensus	2131		99.96
KOG0509|consensus	600		99.96
KOG0509|consensus	600		99.95
PHA02795	437	ankyrin-like protein; Provisional	99.93
PHA02859	209	ankyrin repeat protein; Provisional	99.92
PHA02795	437	ankyrin-like protein; Provisional	99.92
PHA02859	209	ankyrin repeat protein; Provisional	99.92
KOG0505|consensus	527		99.9
KOG0502|consensus	296		99.89
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.88
KOG0514|consensus	452		99.87
KOG0502|consensus	296		99.87
KOG0507|consensus	854		99.86
KOG0507|consensus	854		99.86
KOG0505|consensus	527		99.85
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.84
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.83
PHA02743	166	Viral ankyrin protein; Provisional	99.83
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.83
PHA02743	166	Viral ankyrin protein; Provisional	99.82
KOG0514|consensus	452		99.81
PHA02736	154	Viral ankyrin protein; Provisional	99.78
PHA02741	169	hypothetical protein; Provisional	99.77
PHA02741	169	hypothetical protein; Provisional	99.77
PHA02884	300	ankyrin repeat protein; Provisional	99.75
PHA02736	154	Viral ankyrin protein; Provisional	99.74
KOG0512|consensus	228		99.74
KOG0512|consensus	228		99.72
PHA02884	300	ankyrin repeat protein; Provisional	99.71
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.66
KOG0195|consensus	448		99.64
KOG0195|consensus	448		99.62
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.6
KOG3676|consensus	782		99.6
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.55
KOG4214|consensus	117		99.52
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.51
KOG4214|consensus	117		99.5
KOG3676|consensus	782		99.48
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.47
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.41
KOG1710|consensus	396		99.36
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.35
KOG0515|consensus	752		99.35
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.29
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.28
KOG1710|consensus	396		99.25
KOG0515|consensus	752		99.23
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.21
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.21
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.12
cd01438	223	tankyrase_like Tankyrases interact with the telome	98.89
PF13606	30	Ank_3: Ankyrin repeat	98.8
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.74
PF13606	30	Ank_3: Ankyrin repeat	98.69
KOG0783|consensus	1267		98.69
KOG0506|consensus	622		98.61
KOG0818|consensus	669		98.59
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.58
KOG0818|consensus	669		98.55
KOG0506|consensus	622		98.55
KOG0783|consensus	1267		98.47
KOG0782|consensus	1004		98.44
KOG0705|consensus	749		98.3
KOG0522|consensus	560		98.26
KOG2384|consensus	223		98.26
KOG0522|consensus	560		98.17
KOG0782|consensus	1004		98.12
KOG2384|consensus	223		98.09
KOG0705|consensus	749		98.03
KOG3609|consensus	822		98.03
KOG3609|consensus	822		97.98
KOG0511|consensus	516		97.91
KOG0521|consensus	785		97.88
KOG0511|consensus	516		97.83
KOG0521|consensus	785		97.81
KOG0520|consensus	975		97.28
KOG0520|consensus	975		97.14
KOG2505|consensus	591		97.02
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.69
KOG2505|consensus	591		96.25
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.2
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.47
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	94.92
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	88.66
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	87.92
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	80.19

>KOG4177|consensus

Probab=100.00  E-value=1.6e-61  Score=579.53  Aligned_cols=622  Identities=27%  Similarity=0.289  Sum_probs=485.3

Q ss_pred             HHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHh
Q psy8898         217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRL  296 (1236)
Q Consensus       217 ~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~  296 (1236)
                      +++.|+..++.+++++|+...++.+..+..|.||||+|+..++.+++++++.+|+++...+..|.||             
T Consensus       179 ~~~~~~~~~~~~~~~ll~~~~~~~~a~~~~~~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl~~-------------  245 (1143)
T KOG4177|consen  179 RLHVAAHCGHARVAKLLLDKKADPNASALNGFTPLHIACKKNRIKVVELLLKHGADVSAKDESGLTP-------------  245 (1143)
T ss_pred             hhhHHhhcchHHHHhhhhcccCCccccccCCCCchhhhccccccceeeeeeeccCcCCcccccCccH-------------
Confidence            6688888888888888888888888888888888888888888888888888888888888888877             


Q ss_pred             hhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCc
Q psy8898         297 SNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGY  376 (1236)
Q Consensus       297 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  376 (1236)
                              ++.|+..|+++++++++..+......+                                             
T Consensus       246 --------lh~a~~~g~~~i~~~l~~~ga~~~~~~---------------------------------------------  272 (1143)
T KOG4177|consen  246 --------LHVAAFMGHLDIVKLLLQHGASVNVST---------------------------------------------  272 (1143)
T ss_pred             --------HHHHHhccchhHHHHHHhcccccCccc---------------------------------------------
Confidence                    555778888888888876654332222                                             


Q ss_pred             cHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHh
Q psy8898         377 TALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLA  456 (1236)
Q Consensus       377 t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~  456 (1236)
                                          ..++||+|.|+..+..+++++|+++ +.++........  ||+|+|...|+.++++++++
T Consensus       273 --------------------vr~~tplh~AA~~~~~e~~~~ll~~-ga~~~~~~~~~k--t~l~~a~~~g~~~i~~~~l~  329 (1143)
T KOG4177|consen  273 --------------------VRGETPLHMAARAGQVEVCKLLLQN-GADVLAKARDDQ--TPLHIASRLGHEEIVHLLLQ  329 (1143)
T ss_pred             --------------------ccccCcchhhhccchhhhHhhhhcc-Cccccccccccc--ChhhhhcccchHHHHHHHhh
Confidence                                2344567788888899999999988 777777777664  99999999999999999999


Q ss_pred             cCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCC----CCCchhHHHHHHhcCChHHHHHHhCCCCc-ccccc
Q psy8898         457 HGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSA----ANDPLRELFEACKGGDLTKVKKLVNPQTV-NARDT  531 (1236)
Q Consensus       457 ~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~----~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~  531 (1236)
                      .++.++..    +..|.||+|+++..++.++..++......    ...+.++++.|++.|..+.+++++..+.. +....
T Consensus       330 ~~~~~~aa----r~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk  405 (1143)
T KOG4177|consen  330 AGATPNAA----RTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGK  405 (1143)
T ss_pred             ccCCcccc----CcCCcccccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhccCCcccCCC
Confidence            99988544    44899999999999998877777655543    45678899999999999999999887543 22222


Q ss_pred             cCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHH--------HHHhcCCCCcccCCCC
Q psy8898         532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAK--------ALLQHGADINLKNTDG  603 (1236)
Q Consensus       532 ~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~--------~Ll~~g~d~~~~~~~g  603 (1236)
                                 .|+||||.|+..++.++|+.++++|++++..+..|.||+|+|+.+        .+++.|+++|..-..|
T Consensus       406 -----------~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G  474 (1143)
T KOG4177|consen  406 -----------NGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQG  474 (1143)
T ss_pred             -----------CCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhcccc
Confidence                       288999999999999999999999999999999999999999844        6788899999999999


Q ss_pred             CChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcC
Q psy8898         604 KTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQG  683 (1236)
Q Consensus       604 ~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g  683 (1236)
                      .||||+|+      ..++.+.+.++....                              ...+...+.+-+++|.+...+
T Consensus       475 ~T~Lhlaa------q~Gh~~~~~llle~~------------------------------~~~~~~~~~~l~~lhla~~~~  518 (1143)
T KOG4177|consen  475 FTPLHLAA------QEGHTEVVQLLLEGG------------------------------ANDNLDAKKGLTPLHLAADED  518 (1143)
T ss_pred             Ccchhhhh------ccCCchHHHHhhhcC------------------------------CccCccchhccchhhhhhhhh
Confidence            99999996      778888888776611                              112445566778888888888


Q ss_pred             CHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHC
Q psy8898         684 DPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL  763 (1236)
Q Consensus       684 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~  763 (1236)
                      ...+++.+++++.....++..|+||||.|+..   |+..+|++|+++|+|++.+|+.|+||||.||..|+.+|+.+|+++
T Consensus       519 ~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~---g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~  595 (1143)
T KOG4177|consen  519 TVKVAKILLEHGANVDLRTGRGYTPLHVAVHY---GNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKH  595 (1143)
T ss_pred             hHHHHHHHhhcCCceehhcccccchHHHHHhc---CCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHc
Confidence            88888888888887777777788888888886   788888888888888888888888888888888888888888888


Q ss_pred             CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----Cccccc--------------------------------
Q psy8898         764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADT-----SIVSLL--------------------------------  806 (1236)
Q Consensus       764 ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~-----~~~~~~--------------------------------  806 (1236)
                      ||++|..|.+|.|||++|+..|+++++++|+..++++     ...+-.                                
T Consensus       596 GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~~~~~~~~~i~~~~~rL~~~~~~  675 (1143)
T KOG4177|consen  596 GASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEELDTDRQDLIRGKLQRLDARPKP  675 (1143)
T ss_pred             CCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHHHhhhhhhhhhccchHHhhccchh
Confidence            8888888888888888888888888888888888772     111000                                


Q ss_pred             --------------------------------------------------------------------------------
Q psy8898         807 --------------------------------------------------------------------------------  806 (1236)
Q Consensus       807 --------------------------------------------------------------------------------  806 (1236)
                                                                                                      
T Consensus       676 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~g~~v~~~dn~~~~~~~h~gf~~~~~vda~~i~~r~~  755 (1143)
T KOG4177|consen  676 EEAVGLDLIPPQINTRLLQGRESTPLALELGLNSPEVAEHLLEEGADVQLGDNVGLLDPIHSGFLGSFMVDARGGAMRGC  755 (1143)
T ss_pred             hhhhcccCCCCcccccccccccccchhhhhcCchHHHHHHhhcchhhhcccccccccccccccchhhHHHHhhcccccee
Confidence                                                                                            


Q ss_pred             --------------------------------------------------------------------------------
Q psy8898         807 --------------------------------------------------------------------------------  806 (1236)
Q Consensus       807 --------------------------------------------------------------------------------  806 (1236)
                                                                                                      
T Consensus       756 ~~~~~~~~~~~~~e~~~~~~tcr~~~~~~~~~~~~~~~~e~~a~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~s~~~  835 (1143)
T KOG4177|consen  756 RHAGDRIIIPPLAEAAPKRITCRRVKLLKLAHPPPLAEREGLASRLLAMAPDGAAFLGPPHFASLLKDERELVVLRSWKE  835 (1143)
T ss_pred             ecccceeeccchhhhcccceehhhcccccccCCCCCccccccchhhhccCCchhhhcCchhHHHHhcCcceEEEeecHhh
Confidence                                                                                            


Q ss_pred             -----------------------------------------------------chhHHHhhhchHHHHHHHHHhcCCHHH
Q psy8898         807 -----------------------------------------------------VIFSCSTNLGLKHLLELFEREQITLDI  833 (1236)
Q Consensus       807 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  833 (1236)
                                                                           ....+..+....++...+..+.++++.
T Consensus       836 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~f~~~~~~~~~r~~~~~~~~~~~~  915 (1143)
T KOG4177|consen  836 HDCNYGEDKLYEILNSAEELDTKRICRIITSDRVRQEYLASGPEGGVSTLVPLVQAVFPENALTKRIRVSLQAQPVPLEV  915 (1143)
T ss_pred             hhhccCcchhhhccchHHHhcccchhhHHhhhhhccccccccCCCCcCcccceehhhcCCCcchHHHHHHHhcccccHHH
Confidence                                                                 000011112223344445667888888


Q ss_pred             HhhcChhhhhhhCcccchhhhhhHHHHHHhhcCCCC---CCCCcceeeccCCChhhhhHHHHHHHHHHhhccCCCCCCcc
Q psy8898         834 LAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSF---SQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIF  910 (1236)
Q Consensus       834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  910 (1236)
                      +..+.++.++...+.+++.+++..+.+..+...+..   ....+..+.++.....+.+..+.++.....+...+...+.+
T Consensus       916 ~~~~~~~~~~~~~i~~~e~r~~~~~~~~~l~~~~~~~~~~~~~t~~l~ll~~~~~~~~~a~~~~~t~~~h~~~~~~~~~f  995 (1143)
T KOG4177|consen  916 VTKLLGNKATFSPIVTVEPRRRKFHKPITLRIAPGSNNAYSGDTPTLRLLCSITGGVAPAQWEDITGTTHLTFANDCGSF  995 (1143)
T ss_pred             HHHhcCCcccccceeeecchHHHhhhhhhhccccccCcccCCCCchhhhhhcccCCcCcchhhcccceeeccccccccee
Confidence            889999999999999999999888887766553222   22346678888888888888889998888888888888999


Q ss_pred             ccceeeeehhhchhhHHHHHHHHHHHHhhhcCCcchhhhhccCCchhhhhhhcccchhhHHHHhhhhhhhhcccCccchh
Q psy8898         911 SRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHE  990 (1236)
Q Consensus       911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  990 (1236)
                      ..++..++.+..+++.++++.+....+++.+.-                                           ....
T Consensus       996 ~~~~~~r~~~~~~~~~~e~~~~~~~~~~e~~~~-------------------------------------------~~~~ 1032 (1143)
T KOG4177|consen  996 TTNVSARFWLVDCRKTREAVTHATQLYNELIFV-------------------------------------------YMAK 1032 (1143)
T ss_pred             ehhhhhHhhhhhcchhhhhhhHHHHHHHHHHHH-------------------------------------------HHHH
Confidence            999998888888999998887766554433311                                           1245


Q ss_pred             hhhccCchHHHHHHhcCcccccccccccccccce
Q psy8898         991 RMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKR 1024 (1236)
Q Consensus       991 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 1024 (1236)
                      .++|+++.+..+....+|+..+.+++++++++++
T Consensus      1033 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1143)
T KOG4177|consen 1033 FVVFAKSNFPNEGRLRCFCMTDDKVDKTLEQQEY 1066 (1143)
T ss_pred             HhhhccCCcchhhccccccccCCccCcchhhHHH
Confidence            5667777777777777788777777777776666

>KOG4177|consensus

Probab=100.00  E-value=5e-58  Score=549.42  Aligned_cols=554  Identities=30%  Similarity=0.372  Sum_probs=396.8

Q ss_pred             hhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcchhH
Q psy8898          27 PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSC  106 (1236)
Q Consensus        27 ~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  106 (1236)
                      .||.||++|..+.++.|++.....+...+.|.||+|+|+-.|+.+++++                               
T Consensus        24 ~l~~a~r~~~~~~~~~l~~~e~~~~~~sk~~~~pl~~aa~~~~~~v~~~-------------------------------   72 (1143)
T KOG4177|consen   24 ALHIAARNDDTNAAKLLLQNEHNADVDSKSGFTPLHIAAHYGNENVAEL-------------------------------   72 (1143)
T ss_pred             HHHHHHhccchhhcccccccccccchhcccccCHHHHHhhhhhhhhhhh-------------------------------
Confidence            5888999999888888888876666666688888998888888888887                               


Q ss_pred             HHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCCc
Q psy8898         107 YLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDS  186 (1236)
Q Consensus       107 Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (1236)
                      |+..|+.++.....                                                                  
T Consensus        73 ll~~~a~v~~~~~~------------------------------------------------------------------   86 (1143)
T KOG4177|consen   73 LLNRGAIVNATARN------------------------------------------------------------------   86 (1143)
T ss_pred             hhccccccCccccc------------------------------------------------------------------
Confidence            78888777654443                                                                  


Q ss_pred             ccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHH
Q psy8898         187 VSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLL  266 (1236)
Q Consensus       187 ~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~L  266 (1236)
                                                 |.||||.|+..|+.++++.|+..|+.++..+.+|.||||.|+.+|+.+++++|
T Consensus        87 ---------------------------~~~plh~a~~~~~a~~v~~ll~~ga~~~~~~~~~lTpLh~aa~~g~~~~~~~l  139 (1143)
T KOG4177|consen   87 ---------------------------GITPLHVASKRGDAEMVKLLLCRGAQIDARDRDGLTPLHCAARKGHVQVIELL  139 (1143)
T ss_pred             ---------------------------CccHHHHHHhhcchhHHHHHHhccCchhhcccCCCcchhhhcccccHHHHHHH
Confidence                                       55677777777888888888888888888888888888888888888888888


Q ss_pred             HhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcc--hHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHH
Q psy8898         267 LSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGH--CLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLI  344 (1236)
Q Consensus       267 l~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~--~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~  344 (1236)
                      +..|++++++|++|.||++++....-...+.+.....  +++.+...++..+++.++........               
T Consensus       140 l~~~a~~~~k~~~g~t~l~~a~~~~~~~ll~~~~~~d~l~~~~~~~~~~~~~~~ll~~~~~~~~a---------------  204 (1143)
T KOG4177|consen  140 LQHGAPINIKTKNGLSPLHMAAQVACARLLLEYKAPDYLRLHVAAHCGHARVAKLLLDKKADPNA---------------  204 (1143)
T ss_pred             HHccCCCcccccCCCCchhhhcchhhhHHhhhcccchhhhhhHHhhcchHHHHhhhhcccCCccc---------------
Confidence            8888888888888888888775511111111111111  35777777888888777765432221               


Q ss_pred             HHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhh----h-hhcCCC----CcCchhhHHHHHHhCCCHHHH
Q psy8898         345 DLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSK----K-LLQEPP----SVVDLESQLLEASKGGDMTVV  415 (1236)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~----~-~l~~~~----~~~~~~~~L~~A~~~g~~~~v  415 (1236)
                                                .+..++||+++++....    . ++..+.    ....+-++||.|++.|+++++
T Consensus       205 --------------------------~~~~~~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~  258 (1143)
T KOG4177|consen  205 --------------------------SALNGFTPLHIACKKNRIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIV  258 (1143)
T ss_pred             --------------------------cccCCCCchhhhccccccceeeeeeeccCcCCcccccCccHHHHHHhccchhHH
Confidence                                      12346677777765321    1 122222    245567788888888888888


Q ss_pred             HHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCC
Q psy8898         416 TRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSP  495 (1236)
Q Consensus       416 ~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~  495 (1236)
                      .+++.. +..++..+..+.  ||+|.|+..+..+++++|+++|+++..+    +....||+|.|...++.+++++++..+
T Consensus       259 ~~l~~~-ga~~~~~~vr~~--tplh~AA~~~~~e~~~~ll~~ga~~~~~----~~~~kt~l~~a~~~g~~~i~~~~l~~~  331 (1143)
T KOG4177|consen  259 KLLLQH-GASVNVSTVRGE--TPLHMAARAGQVEVCKLLLQNGADVLAK----ARDDQTPLHIASRLGHEEIVHLLLQAG  331 (1143)
T ss_pred             HHHHhc-ccccCccccccc--CcchhhhccchhhhHhhhhccCcccccc----cccccChhhhhcccchHHHHHHHhhcc
Confidence            888887 666777666554  8888888888888888888888888444    447888888888888888888887666


Q ss_pred             CC----CCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCc
Q psy8898         496 SA----ANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVN  571 (1236)
Q Consensus       496 ~~----~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~  571 (1236)
                      ..    ...+.+++|.++..++.++...+............          .|+||+|.|+.+|..++++++++.|+++|
T Consensus       332 ~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~----------k~~~pl~la~~~g~~~~v~Lll~~ga~~~  401 (1143)
T KOG4177|consen  332 ATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEE----------KGFTPLHLAVKSGRVSVVELLLEAGADPN  401 (1143)
T ss_pred             CCccccCcCCcccccHhhhhhhHHHHHHhhccccccCcccc----------cCCcchhhhcccCchhHHHhhhhccCCcc
Confidence            54    34567788888888888866666554332222111          27788888888888888888888888888


Q ss_pred             cCCCCCCCHHHHHH-------HHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCC
Q psy8898         572 VADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWP  644 (1236)
Q Consensus       572 ~~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  644 (1236)
                      .....|.||||.++       ++.++++|++++..+..|+||+|+|+...+     ..+....+.               
T Consensus       402 ~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~-----~~~~~~~l~---------------  461 (1143)
T KOG4177|consen  402 SAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGR-----YLQIARLLL---------------  461 (1143)
T ss_pred             cCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhccc-----HhhhhhhHh---------------
Confidence            88888888888886       457778888888888888888888863221     222222211               


Q ss_pred             CCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHH
Q psy8898         645 LGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIV  724 (1236)
Q Consensus       645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv  724 (1236)
                                     ....+++.....|.|+||.|+..|+.++++.|++...........|.|+||.|...   +...++
T Consensus       462 ---------------~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~---~~v~~~  523 (1143)
T KOG4177|consen  462 ---------------QYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADE---DTVKVA  523 (1143)
T ss_pred             ---------------hcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhh---hhHHHH
Confidence                           12345677777788888888888888888877777765555555677888888776   677778


Q ss_pred             HHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy8898         725 ESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADT  800 (1236)
Q Consensus       725 ~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~  800 (1236)
                      +.++++|++++.++..|+||||+||.+|++++|++||++|||++.+|+.|+||||.|+..|+.+|+.+|+++||++
T Consensus       524 ~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~v  599 (1143)
T KOG4177|consen  524 KILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASV  599 (1143)
T ss_pred             HHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCC
Confidence            8888888888888888888888888888888888888888888888888888888888877777776666655433

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=6.3e-51  Score=508.69  Aligned_cols=465  Identities=25%  Similarity=0.276  Sum_probs=335.1

Q ss_pred             HHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHhCCCceEEeeeccccCcccccc
Q psy8898          10 LLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN-PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQY   88 (1236)
Q Consensus        10 Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~-~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~   88 (1236)
                      |+.+|++...++..|.||||.||..||.|+|+.|++.+++ ++..|..|.||||+|+..++..  ..             
T Consensus        27 ~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~--~~-------------   91 (682)
T PHA02876         27 LHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVM--DI-------------   91 (682)
T ss_pred             HhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCcc--cc-------------
Confidence            4566888888899999999999999999999999999887 5788899999999999988743  33             


Q ss_pred             ccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccC
Q psy8898          89 VYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCG  168 (1236)
Q Consensus        89 ~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (1236)
                                        ++.-....+.....+.+.+..+...... .....+......                     
T Consensus        92 ------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~il~~~~~~---------------------  131 (682)
T PHA02876         92 ------------------VISLTLDCDIILDIKYASIILNKHKLDE-ACIHILKEAISG---------------------  131 (682)
T ss_pred             ------------------ccccccchhhcccccHHHHHHHHHHHHH-HHHHHHHHHhcC---------------------
Confidence                              2221122222233333333333222222 222222211000                     


Q ss_pred             CCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCC
Q psy8898         169 DNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQF  248 (1236)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~  248 (1236)
                                               ...+.+...       ......++|+.|+..|+.+++++|++.|+++|.+|..|+
T Consensus       132 -------------------------~~~~~~~~~-------~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~  179 (682)
T PHA02876        132 -------------------------NDIHYDKIN-------ESIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCI  179 (682)
T ss_pred             -------------------------CcccHHhhc-------cchhhhHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCC
Confidence                                     000000000       000245789999999999999999999999999999999


Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccC
Q psy8898         249 TPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNF  328 (1236)
Q Consensus       249 TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~  328 (1236)
                      ||||+|+..|+.++|++|+++|++++..+..|.||                     |+.|+..|+.++++.+++.+... 
T Consensus       180 TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~---------------------L~~A~~~~~~~ivk~Ll~~~~~~-  237 (682)
T PHA02876        180 TPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSV---------------------LECAVDSKNIDTIKAIIDNRSNI-  237 (682)
T ss_pred             CHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCH---------------------HHHHHHcCCHHHHHHHHhcCCCC-
Confidence            99999999999999999999999999988777776                     45566666666666666432110 


Q ss_pred             CCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHh
Q psy8898         329 KHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASK  408 (1236)
Q Consensus       329 ~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~  408 (1236)
                                                                                          ....++|+.|+.
T Consensus       238 --------------------------------------------------------------------~~~~~~L~~ai~  249 (682)
T PHA02876        238 --------------------------------------------------------------------NKNDLSLLKAIR  249 (682)
T ss_pred             --------------------------------------------------------------------CCCcHHHHHHHH
Confidence                                                                                001123455555


Q ss_pred             CCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCH-HHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHH
Q psy8898         409 GGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRV-AVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQL  487 (1236)
Q Consensus       409 ~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~-~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~i  487 (1236)
                      .++.+.++.|++. +.+++..+..|  +||||+|+..++. +++++|+++|++++..+    ..                
T Consensus       250 ~~~~~~~~~Ll~~-g~~vn~~d~~g--~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d----~~----------------  306 (682)
T PHA02876        250 NEDLETSLLLYDA-GFSVNSIDDCK--NTPLHHASQAPSLSRLVPKLLERGADVNAKN----IK----------------  306 (682)
T ss_pred             cCCHHHHHHHHHC-CCCCCCCCCCC--CCHHHHHHhCCCHHHHHHHHHHCCCCCCCcC----CC----------------
Confidence            5566665555554 44444444333  3666666655554 35556666665553322    23                


Q ss_pred             HhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcC-cHHHHHHHHhC
Q psy8898         488 SALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYG-HYEVTEMLVKH  566 (1236)
Q Consensus       488 v~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g-~~~iv~~Ll~~  566 (1236)
                                                                              |.||||+|+..| +.+++++|++.
T Consensus       307 --------------------------------------------------------g~TpLh~Aa~~g~~~~~v~~Ll~~  330 (682)
T PHA02876        307 --------------------------------------------------------GETPLYLMAKNGYDTENIRTLIML  330 (682)
T ss_pred             --------------------------------------------------------CCCHHHHHHHhCCCHHHHHHHHHc
Confidence                                                                    555666666666 46777777888


Q ss_pred             CCCCccCCCCCCCHHHHHH--------HHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCc
Q psy8898         567 GANVNVADLWKFTPLHEAA--------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGL  638 (1236)
Q Consensus       567 g~~v~~~d~~g~tpL~~a~--------~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~  638 (1236)
                      |++++..|..|.||||+|+        +++|++.|++++.+|..|.||||+|                            
T Consensus       331 gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~A----------------------------  382 (682)
T PHA02876        331 GADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYA----------------------------  382 (682)
T ss_pred             CCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHH----------------------------
Confidence            8888888878888888776        3467777777777777777766655                            


Q ss_pred             ccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCC
Q psy8898         639 HRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYP  718 (1236)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~  718 (1236)
                                                               +..|+.+++++|++.+......+..|.||||+|+..  .
T Consensus       383 -----------------------------------------a~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~--~  419 (682)
T PHA02876        383 -----------------------------------------AVRNNVVIINTLLDYGADIEALSQKIGTALHFALCG--T  419 (682)
T ss_pred             -----------------------------------------HHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHc--C
Confidence                                                     567889999999999888777777899999999974  2


Q ss_pred             ChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhC-CHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8898         719 KRKAIVESLIRKGAHLNEKNKELLAPIHLAADLG-HLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN  797 (1236)
Q Consensus       719 ~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g-~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~g  797 (1236)
                      +...++++|+++|+++|.+|..|+||||+|+..| +.+++++|+++|+++|.+|..|.|||++|+..+  +++++|+++|
T Consensus       420 ~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~~~--~~v~~Ll~~~  497 (682)
T PHA02876        420 NPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEYH--GIVNILLHYG  497 (682)
T ss_pred             CHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC--CHHHHHHHCC
Confidence            4578899999999999999999999999999987 689999999999999999999999999999876  5899999999


Q ss_pred             CCCCcc
Q psy8898         798 ADTSIV  803 (1236)
Q Consensus       798 a~~~~~  803 (1236)
                      ++....
T Consensus       498 a~~~~~  503 (682)
T PHA02876        498 AELRDS  503 (682)
T ss_pred             CCCCcC
Confidence            988754

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=7.4e-50  Score=481.02  Aligned_cols=478  Identities=15%  Similarity=0.114  Sum_probs=360.5

Q ss_pred             HHHHHHHHHcCCCccccCCCCcchhhHHhhc---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898           4 KDVVEYLLASGASIHARDDGGLHPLHNACSF---GHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus         4 ~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      +|.|+.|+..|..++.+|.+|+||||+||..   |+.++|++||+.|++++..|..|+||||+|+..|+.++++.     
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~-----   86 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKD-----   86 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHH-----
Confidence            5789999999999999999999999998665   88999999999999999999999999999999999877642     


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPS  160 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~  160 (1236)
                                            .+++|++++...+..+                                          
T Consensus        87 ----------------------~~~~Ll~~~~~~n~~~------------------------------------------  102 (661)
T PHA02917         87 ----------------------IAMALLEATGYSNIND------------------------------------------  102 (661)
T ss_pred             ----------------------HHHHHHhccCCCCCCC------------------------------------------
Confidence                                  1233666543333211                                          


Q ss_pred             cccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCC
Q psy8898         161 QYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANV  240 (1236)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~  240 (1236)
                                                                           ..+++++|+..|+.++|++|+++|+++
T Consensus       103 -----------------------------------------------------~~~~~~~a~~~~~~e~vk~Ll~~Gadi  129 (661)
T PHA02917        103 -----------------------------------------------------FNIFSYMKSKNVDVDLIKVLVEHGFDL  129 (661)
T ss_pred             -----------------------------------------------------cchHHHHHhhcCCHHHHHHHHHcCCCC
Confidence                                                                 123678899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHH--HcCcHHHHHHHHhCCCCCCCCCCC---CCCccccccchhHHHHhhhccCcchHHHHHHcCChH
Q psy8898         241 NAMDLWQFTPLHEAA--SKSRLEVCSLLLSEGADPTLHNCH---SKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPS  315 (1236)
Q Consensus       241 n~~d~~g~TpL~~A~--~~g~~~iv~~Ll~~ga~~~~~~~~---g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~  315 (1236)
                      |.+|.+|+||||.|+  ..|+.++|++|+++|++++..|..   |.+...+                             
T Consensus       130 n~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~-----------------------------  180 (661)
T PHA02917        130 SVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDY-----------------------------  180 (661)
T ss_pred             CccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccc-----------------------------
Confidence            999999999999654  578999999999999999865532   2211100                             


Q ss_pred             HHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCC
Q psy8898         316 RVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPS  395 (1236)
Q Consensus       316 ~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~  395 (1236)
                                                                             ....+.||||+|+.....-..    
T Consensus       181 -------------------------------------------------------~~~~~~t~L~~a~~~~~~~~~----  201 (661)
T PHA02917        181 -------------------------------------------------------QPRNCGTVLHLYIISHLYSES----  201 (661)
T ss_pred             -------------------------------------------------------cccccccHHHHHHhhcccccc----
Confidence                                                                   000123444333210000000    


Q ss_pred             cCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCH--HHHHHHHhcCCCCCCCCCCCccCCC
Q psy8898         396 VVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRV--AVVEYLLAHGADVHSKDNATDKWGF  473 (1236)
Q Consensus       396 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~--~iv~~Ll~~ga~~~~~~~~~d~~g~  473 (1236)
                               .-+..++.+++++|++. |.+++..+.+|.  ||||+|+..|+.  ++|++|++ |++++......|..|.
T Consensus       202 ---------~~~~~~~~eiv~~Li~~-Gadvn~~d~~G~--TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~  268 (661)
T PHA02917        202 ---------DTRAYVRPEVVKCLINH-GIKPSSIDKNYC--TALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCC  268 (661)
T ss_pred             ---------cccccCcHHHHHHHHHC-CCCcccCCCCCC--cHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccc
Confidence                     00124689999999998 889998887764  999999999985  79999985 9888665556777899


Q ss_pred             ChHHHHHh-------c--CchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhcc
Q psy8898         474 TPLHEAAQ-------K--GRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAG  544 (1236)
Q Consensus       474 t~L~~A~~-------~--~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g  544 (1236)
                      +|+++|+.       +  .+.+++++|++.+..  .+.++++.+...++.+++++++...+.+         +++     
T Consensus       269 ~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-----  332 (661)
T PHA02917        269 TRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP--HGIMCSIVPLWRNDKETISLILKTMNSD---------VLQ-----  332 (661)
T ss_pred             cchHHHHHHHhhccccccchHHHHHHHHhCCCC--CceeEeeecccccchHHHHHHHHHhchH---------HHH-----
Confidence            99999983       1  177999999999863  4567788888899999999988532211         111     


Q ss_pred             chhHHHHHhcCc--HHHHHHHHhCCCCCccCCCCCCCHHHH---HHHHHHH-hcCCCCcccCCCCCChhhhhcccCcccc
Q psy8898         545 LVPLHNACSYGH--YEVTEMLVKHGANVNVADLWKFTPLHE---AAAKALL-QHGADINLKNTDGKTALDLAVPCTRAVL  618 (1236)
Q Consensus       545 ~t~L~~A~~~g~--~~iv~~Ll~~g~~v~~~d~~g~tpL~~---a~~~~Ll-~~g~d~~~~~~~g~t~L~~a~~~~~~~~  618 (1236)
                       +++..|+..|.  .+++++|+++|+++|.++..|.|+...   -.++.|+ ..|++++..+.+|+||||.|++...   
T Consensus       333 -~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~---  408 (661)
T PHA02917        333 -HILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNY---  408 (661)
T ss_pred             -HHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcc---
Confidence             23444555676  569999999999999999999997632   1345555 4799988888889999998852111   


Q ss_pred             cCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcc
Q psy8898         619 SGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVN  698 (1236)
Q Consensus       619 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~  698 (1236)
                                                                                      ++.+...+...     
T Consensus       409 ----------------------------------------------------------------~~~~~~~~~~~-----  419 (661)
T PHA02917        409 ----------------------------------------------------------------GCYNFYTYTYK-----  419 (661)
T ss_pred             ----------------------------------------------------------------cchhhhhhhhh-----
Confidence                                                                            01111100000     


Q ss_pred             cCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHH
Q psy8898         699 FKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTAL  778 (1236)
Q Consensus       699 ~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL  778 (1236)
                           .|.+....++     +..+++++|+++|+|+|.+|..|+||||+|+..++.+++++|+++|+++|.+|..|+|||
T Consensus       420 -----~~~~~~~~~~-----~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L  489 (661)
T PHA02917        420 -----KGLCDMSYAC-----PILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCI  489 (661)
T ss_pred             -----hccchhhhhh-----hhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHH
Confidence                 1222222222     478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH-cCCHHHHHHHHhCCCCCCcc
Q psy8898         779 HRTAR-DDKTQAVRVLLSHNADTSIV  803 (1236)
Q Consensus       779 ~~A~~-~~~~~iv~~Ll~~ga~~~~~  803 (1236)
                      |+|+. .++.+++++|+++|++++..
T Consensus       490 ~~A~~~~~~~~iv~~LL~~ga~i~~i  515 (661)
T PHA02917        490 AIAINESRNIELLKMLLCHKPTLDCV  515 (661)
T ss_pred             HHHHHhCCCHHHHHHHHHcCCChhHH
Confidence            99996 78999999999999988754

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=5.2e-47  Score=473.45  Aligned_cols=379  Identities=22%  Similarity=0.254  Sum_probs=254.4

Q ss_pred             HHHHHhcCcHHH-HHH-----HHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC-CCCCCCCCCCccccccch
Q psy8898         218 LHNACSYGHFEV-TEM-----LIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD-PTLHNCHSKSAIDVAPTR  290 (1236)
Q Consensus       218 L~~Aa~~g~~~i-v~~-----Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~t~l~~a~~~  290 (1236)
                      |..++..|+.+- +..     |+++|++....+..++||||.|+..|+.|+|+.|++...+ ++..|..|.||||+|+..
T Consensus         6 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~   85 (682)
T PHA02876          6 LYRIMCRGNCIDILSAIDNYDLHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICII   85 (682)
T ss_pred             HHHHHhcCchHHHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCC
Confidence            566666666532 222     3345777666677788888888888888888888887665 456677788888877643


Q ss_pred             hHHHHhhh----------ccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHH
Q psy8898         291 ELQQRLSN----------EFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEM  360 (1236)
Q Consensus       291 ~~~~~~~~----------~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~  360 (1236)
                      +......-          ..+.+... +...+..+.....+....                                   
T Consensus        86 ~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~il~~~~-----------------------------------  129 (682)
T PHA02876         86 PNVMDIVISLTLDCDIILDIKYASII-LNKHKLDEACIHILKEAI-----------------------------------  129 (682)
T ss_pred             CCccccccccccchhhcccccHHHHH-HHHHHHHHHHHHHHHHHh-----------------------------------
Confidence            32110000          00001111 111111111111111000                                   


Q ss_pred             HHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHH
Q psy8898         361 QATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLH  440 (1236)
Q Consensus       361 ~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~  440 (1236)
                                    ..+.++++..         ....+..++++.|+..|+.+++++|++. |.+++.++..|  +||||
T Consensus       130 --------------~~~~~~~~~~---------~~~~~~~~~l~~~i~~~~~~i~k~Ll~~-Gadvn~~d~~G--~TpLh  183 (682)
T PHA02876        130 --------------SGNDIHYDKI---------NESIEYMKLIKERIQQDELLIAEMLLEG-GADVNAKDIYC--ITPIH  183 (682)
T ss_pred             --------------cCCcccHHhh---------ccchhhhHHHHHHHHCCcHHHHHHHHhC-CCCCCCCCCCC--CCHHH
Confidence                          0000111100         0112234578889999999999999988 78888887765  59999


Q ss_pred             HHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHH
Q psy8898         441 FAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKL  520 (1236)
Q Consensus       441 ~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~L  520 (1236)
                      +|+..|+.++|++|+++|++++.    .+..|.||||+|+..++.+++++|++.......                    
T Consensus       184 ~Aa~~G~~~iv~~LL~~Gad~n~----~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~--------------------  239 (682)
T PHA02876        184 YAAERGNAKMVNLLLSYGADVNI----IALDDLSVLECAVDSKNIDTIKAIIDNRSNINK--------------------  239 (682)
T ss_pred             HHHHCCCHHHHHHHHHCCCCcCc----cCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC--------------------
Confidence            99999999999999999999954    445889999999998888888887654332221                    


Q ss_pred             hCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccC
Q psy8898         521 VNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKN  600 (1236)
Q Consensus       521 l~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~  600 (1236)
                                             +.++|+.|+..++.+++++|++.|++++..|..|.||||+|+               
T Consensus       240 -----------------------~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa---------------  281 (682)
T PHA02876        240 -----------------------NDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHAS---------------  281 (682)
T ss_pred             -----------------------CcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH---------------
Confidence                                   345788888888888888888888888777766666666654               


Q ss_pred             CCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHH
Q psy8898         601 TDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEAC  680 (1236)
Q Consensus       601 ~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~  680 (1236)
                                                                                                      
T Consensus       282 --------------------------------------------------------------------------------  281 (682)
T PHA02876        282 --------------------------------------------------------------------------------  281 (682)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HcCCH-HHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhC-CHHHHH
Q psy8898         681 RQGDP-SRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLG-HLDVLD  758 (1236)
Q Consensus       681 ~~g~~-~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g-~~~iv~  758 (1236)
                      ..++. ++++.|++.+......+..|+||||+|+..+  ...+++++|+..|++++.+|..|+||||+|+..+ +.++++
T Consensus       282 ~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g--~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~  359 (682)
T PHA02876        282 QAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNG--YDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVI  359 (682)
T ss_pred             hCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC--CCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHH
Confidence            11221 2444555555444444445666777777651  1478888888889998888888899999988854 688888


Q ss_pred             HHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q psy8898         759 TLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSI  802 (1236)
Q Consensus       759 ~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~  802 (1236)
                      +|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus       360 lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~  403 (682)
T PHA02876        360 TLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEA  403 (682)
T ss_pred             HHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccc
Confidence            88888999988888899999999999999999999888876543

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.1e-45  Score=445.01  Aligned_cols=356  Identities=17%  Similarity=0.144  Sum_probs=252.0

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHh---CCCceEEeeeccccCccccccccccCCCCCCCCCcchhHHHhcCCC
Q psy8898          37 ADVVRLLLEADANPNTRDNWNFTPLHEAAAK---GKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGAD  113 (1236)
Q Consensus        37 ~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~  113 (1236)
                      ++.|+.|+..|+.++..|..|+||||+|+..   |+.++|++                               |+++|++
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~-------------------------------Ll~~ga~   60 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKL-------------------------------LLDSGTN   60 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHH-------------------------------HHHCCCC
Confidence            5788999999999999999999999998666   77999988                               9999999


Q ss_pred             CCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCC
Q psy8898         114 PFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTS  193 (1236)
Q Consensus       114 ~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (1236)
                      ++.++..|+||||+|+..|+.+++                                                        
T Consensus        61 v~~~~~~g~TpL~~Aa~~g~~~v~--------------------------------------------------------   84 (661)
T PHA02917         61 PLHKNWRQLTPLEEYTNSRHVKVN--------------------------------------------------------   84 (661)
T ss_pred             ccccCCCCCCHHHHHHHcCChhHH--------------------------------------------------------
Confidence            998887777776666665554433                                                        


Q ss_pred             CChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy8898         194 PPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP  273 (1236)
Q Consensus       194 ~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~  273 (1236)
                                                       .++++.|++.+..+|..+.  .++++.|+.+|+.++|++|+++|+|+
T Consensus        85 ---------------------------------~~~~~~Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll~~Gadi  129 (661)
T PHA02917         85 ---------------------------------KDIAMALLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLVEHGFDL  129 (661)
T ss_pred             ---------------------------------HHHHHHHHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHHHcCCCC
Confidence                                             2457788877544555442  37888899999999999999999999


Q ss_pred             CCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhH
Q psy8898         274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEF  353 (1236)
Q Consensus       274 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~  353 (1236)
                      +..|..|+|||+.+                                                                  
T Consensus       130 n~~d~~g~T~L~~~------------------------------------------------------------------  143 (661)
T PHA02917        130 SVKCENHRSVIENY------------------------------------------------------------------  143 (661)
T ss_pred             CccCCCCccHHHHH------------------------------------------------------------------
Confidence            99998888885432                                                                  


Q ss_pred             HHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCC
Q psy8898         354 ITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDG  433 (1236)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~  433 (1236)
                                                                         .|+..|+.+++++|++. |++++..+..+
T Consensus       144 ---------------------------------------------------~a~~~~~~eivklLi~~-Ga~vn~~d~~~  171 (661)
T PHA02917        144 ---------------------------------------------------VMTDDPVPEIIDLFIEN-GCSVLYEDEDD  171 (661)
T ss_pred             ---------------------------------------------------HHccCCCHHHHHHHHHc-CCCcccccccc
Confidence                                                               12234556666666655 55555433211


Q ss_pred             ------------CCchHHHHHHh-----------cCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCch--HHH
Q psy8898         434 ------------RHSTPLHFAAG-----------YNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT--QLS  488 (1236)
Q Consensus       434 ------------~g~t~L~~A~~-----------~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~--~iv  488 (1236)
                                  .+.||||+|+.           .++.++|++|+++|++++.    .|.+|+||||+|+.+|+.  +++
T Consensus       172 ~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~----~d~~G~TpLh~A~~~g~~~~eiv  247 (661)
T PHA02917        172 EYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS----IDKNYCTALQYYIKSSHIDIDIV  247 (661)
T ss_pred             ccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc----CCCCCCcHHHHHHHcCCCcHHHH
Confidence                        22499999986           4689999999999999954    455899999999988874  466


Q ss_pred             hhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhc-------C--cHHH
Q psy8898         489 ALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSY-------G--HYEV  559 (1236)
Q Consensus       489 ~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~-------g--~~~i  559 (1236)
                      ++|+. +                            .+.+.....   .++    .|.+|+++|+.-       +  +.++
T Consensus       248 k~Li~-g----------------------------~d~~~~~~~---~~~----~~~~~~~~a~yl~~~~~~~~~v~~~i  291 (661)
T PHA02917        248 KLLMK-G----------------------------IDNTAYSYI---DDL----TCCTRGIMADYLNSDYRYNKDVDLDL  291 (661)
T ss_pred             HHHHh-C----------------------------Ccccccccc---cCc----ccccchHHHHHHHhhccccccchHHH
Confidence            65532 1                            111110000   000    267888888831       1  6678


Q ss_pred             HHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcc
Q psy8898         560 TEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLH  639 (1236)
Q Consensus       560 v~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  639 (1236)
                      |++|++.|++.                                +.++++++                             
T Consensus       292 v~~Li~~Ga~~--------------------------------~~~~~~~~-----------------------------  310 (661)
T PHA02917        292 VKLFLENGKPH--------------------------------GIMCSIVP-----------------------------  310 (661)
T ss_pred             HHHHHhCCCCC--------------------------------ceeEeeec-----------------------------
Confidence            88888877631                                22333333                             


Q ss_pred             cccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhh---CC
Q psy8898         640 RYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVT---SP  716 (1236)
Q Consensus       640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~---~~  716 (1236)
                                                              +..++.+++.+++...        .+.++||.+..   .+
T Consensus       311 ----------------------------------------~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~~~g  342 (661)
T PHA02917        311 ----------------------------------------LWRNDKETISLILKTM--------NSDVLQHILIEYMTFG  342 (661)
T ss_pred             ----------------------------------------ccccchHHHHHHHHHh--------chHHHHHHHHHHHHcC
Confidence                                                    4445566666666421        14455554443   32


Q ss_pred             CCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHH-CCCCccccCCCCCcHHHHHHHcCC
Q psy8898         717 YPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLR-LGAKVNLVDVLGQTALHRTARDDK  786 (1236)
Q Consensus       717 ~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~-~ga~~n~~d~~G~tpL~~A~~~~~  786 (1236)
                      . ...+++++|+++|||+|.++..|+|+.    ...+.+++++||. .|++++..+.+|+||||.|++.+.
T Consensus       343 ~-~~~~~v~~Ll~~GAdvn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~  408 (661)
T PHA02917        343 D-IDIPLVECMLEYGAVVNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNY  408 (661)
T ss_pred             C-CcHHHHHHHHHcCCCCCCCCccccchh----hcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcc
Confidence            1 247799999999999999999999865    3667889988887 699888888889999999987664

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=7.9e-45  Score=421.79  Aligned_cols=445  Identities=18%  Similarity=0.161  Sum_probs=304.7

Q ss_pred             HHHHHHHHcCCCcc-ccCCCCcchhhHHhhcC---CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC--CCceEEeeec
Q psy8898           5 DVVEYLLASGASIH-ARDDGGLHPLHNACSFG---HADVVRLLLEADANPNTRDNWNFTPLHEAAAKG--KTDVCIGIYF   78 (1236)
Q Consensus         5 ~~v~~Ll~~ga~~n-~~d~~g~t~L~~A~~~g---~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g--~~~iv~~Ll~   78 (1236)
                      +.++..++.-+++| .+|.+|+||||+|+..|   +.++|++||++||+++..|..|+||||+|+..+  +.++|++   
T Consensus        21 ~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~---   97 (672)
T PHA02730         21 KKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHL---   97 (672)
T ss_pred             HHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHH---
Confidence            45666677666888 88899999999999997   599999999999999999999999999999977  7899988   


Q ss_pred             cccCccccccccccCCCCCCCCCcchhHHHhcCCCC--CCcccCCCCcchhhcc--cChHHHHHHHHhcCCCCCCCCCCC
Q psy8898          79 AEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADP--FLKNQEGQTPLDLTVA--EDVRSLLQDAMAQYPGAPSCAETA  154 (1236)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~L~~A~~--~~~~~~v~~l~~~~~~~~~~~~~~  154 (1236)
                                                  |+++|++.  +..+..+.+||+.++.  +++.++|+.|+......+....  
T Consensus        98 ----------------------------Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~--  147 (672)
T PHA02730         98 ----------------------------LISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNT--  147 (672)
T ss_pred             ----------------------------HHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhh--
Confidence                                        99997655  6677778999999888  8899999988852110000000  


Q ss_pred             CCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc-CCchHHHHHHhcCcHHHHHHH
Q psy8898         155 SVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA-LGLVPLHNACSYGHFEVTEML  233 (1236)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~-~g~T~L~~Aa~~g~~~iv~~L  233 (1236)
                                                                           ....+ .|.+|+++|...++.|+|++|
T Consensus       148 -----------------------------------------------------~~~~~~~~~~~~yl~~~~~~~eIvklL  174 (672)
T PHA02730        148 -----------------------------------------------------NYYIHCLGLVDIYVTTPNPRPEVLLWL  174 (672)
T ss_pred             -----------------------------------------------------hhhccccchhhhhHhcCCCchHHHHHH
Confidence                                                                 00011 378999999999999999999


Q ss_pred             HhcCCCCC-------CCCCCCC-cHHHHHH------HcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhc
Q psy8898         234 IKAGANVN-------AMDLWQF-TPLHEAA------SKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNE  299 (1236)
Q Consensus       234 l~~ga~~n-------~~d~~g~-TpL~~A~------~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~  299 (1236)
                      +++|++++       ..+..+. |.||+++      .+++.|++++|+++||++|.+|.+|.||||++            
T Consensus       175 i~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~------------  242 (672)
T PHA02730        175 LKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYY------------  242 (672)
T ss_pred             HHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHH------------
Confidence            99999996       2333444 5566444      45788999999999999999999999997642            


Q ss_pred             cCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHH
Q psy8898         300 FKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTAL  379 (1236)
Q Consensus       300 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l  379 (1236)
                             .+...|+.|+++.|+......... .+..++-..-.+..++..+.               ...          
T Consensus       243 -------~~~~~~~~eiv~~Li~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------------~~~----------  289 (672)
T PHA02730        243 -------WSCSTIDIEIVKLLIKDVDTCSVY-DDISQPYIRGVLADYLNKRF---------------RVT----------  289 (672)
T ss_pred             -------HHcCcccHHHHHHHHhcccccccc-ccccchhhhhhHHHhhhhhh---------------hcc----------
Confidence                   356678899999999732111000 00001100001111111000               000          


Q ss_pred             HHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccC----CCCCC--------------------
Q psy8898         380 QVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRD----LDGRH--------------------  435 (1236)
Q Consensus       380 ~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~----~~~~g--------------------  435 (1236)
                                                 -..-+.++|+.|++.+....+...    .+.+|                    
T Consensus       290 ---------------------------~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~  342 (672)
T PHA02730        290 ---------------------------PYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESI  342 (672)
T ss_pred             ---------------------------cCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhH
Confidence                                       001234455555553222100000    01111                    


Q ss_pred             -chHHHHHHhcC---CHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhc
Q psy8898         436 -STPLHFAAGYN---RVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKG  511 (1236)
Q Consensus       436 -~t~L~~A~~~g---~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~  511 (1236)
                       +-.|+.=.+++   +.+++++|+++||+++.. .    .                                        
T Consensus       343 ~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~----~----------------------------------------  377 (672)
T PHA02730        343 VQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-T----D----------------------------------------  377 (672)
T ss_pred             HHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-C----C----------------------------------------
Confidence             12455555544   588999999999988643 1    3                                        


Q ss_pred             CChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCc----HHHHHHHHhCCC--CCccCCCCCCCHHHHHH
Q psy8898         512 GDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGH----YEVTEMLVKHGA--NVNVADLWKFTPLHEAA  585 (1236)
Q Consensus       512 g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~----~~iv~~Ll~~g~--~v~~~d~~g~tpL~~a~  585 (1236)
                                                      |.||||+|+..++    .+++++|+++|+  ++|..|..|.||||.+.
T Consensus       378 --------------------------------G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i  425 (672)
T PHA02730        378 --------------------------------NNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLI  425 (672)
T ss_pred             --------------------------------CCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHH
Confidence                                            4455555555553    789999998886  45555555555544211


Q ss_pred             HHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccc
Q psy8898         586 AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMP  665 (1236)
Q Consensus       586 ~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  665 (1236)
                                             .+.                                                      
T Consensus       426 -----------------------~a~------------------------------------------------------  428 (672)
T PHA02730        426 -----------------------LSR------------------------------------------------------  428 (672)
T ss_pred             -----------------------HHH------------------------------------------------------
Confidence                                   010                                                      


Q ss_pred             cchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHH
Q psy8898         666 RIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPI  745 (1236)
Q Consensus       666 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~L  745 (1236)
                                     ..+.                    +.     .+.  .....+++++|+++|+|+|.+|..|+|||
T Consensus       429 ---------------~~n~--------------------~~-----~~~--e~~~~~ivk~LIs~GADINakD~~G~TPL  466 (672)
T PHA02730        429 ---------------FNNC--------------------GY-----HCY--ETILIDVFDILSKYMDDIDMIDNENKTLL  466 (672)
T ss_pred             ---------------hccc--------------------cc-----ccc--chhHHHHHHHHHhcccchhccCCCCCCHH
Confidence                           0000                    00     000  00246789999999999999999999999


Q ss_pred             HHHHHhCCHHHHHHHHHCCCCccccCC-CCCcHHHHHHHc--CCHHHHHHHHhCCCCCCcc
Q psy8898         746 HLAADLGHLDVLDTLLRLGAKVNLVDV-LGQTALHRTARD--DKTQAVRVLLSHNADTSIV  803 (1236)
Q Consensus       746 h~A~~~g~~~iv~~Ll~~ga~~n~~d~-~G~tpL~~A~~~--~~~~iv~~Ll~~ga~~~~~  803 (1236)
                      |+|+..++.+++++|+++||++|.+|. .|.||||+|+..  ++.+++++|+++|++.+..
T Consensus       467 h~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~~I  527 (672)
T PHA02730        467 YYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLETM  527 (672)
T ss_pred             HHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHHHH
Confidence            999999999999999999999999997 599999999974  7999999999999887654

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=2.7e-44  Score=418.47  Aligned_cols=101  Identities=18%  Similarity=0.084  Sum_probs=82.1

Q ss_pred             HcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHH
Q psy8898         681 RQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTL  760 (1236)
Q Consensus       681 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~L  760 (1236)
                      ..+..++++.+..++.      ..|.||||+|+..   |+.++|++|+++|+       .|+||||+|++.|+.++|++|
T Consensus       279 ~~~~~~~~e~l~~~g~------~~~~TpLh~Aa~~---g~~eivk~Ll~~~~-------~~~t~L~~A~~~~~~~~v~~L  342 (446)
T PHA02946        279 FYDRDDVLEIINDKGK------QYDSTDFKMAVEV---GSIRCVKYLLDNDI-------ICEDAMYYAVLSEYETMVDYL  342 (446)
T ss_pred             HcCchHHHHHHHHcCc------ccCCCHHHHHHHc---CCHHHHHHHHHCCC-------ccccHHHHHHHhCHHHHHHHH
Confidence            3344445555544432      1277899999987   88999999999864       468999999999999999999


Q ss_pred             HHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8898         761 LRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA  798 (1236)
Q Consensus       761 l~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga  798 (1236)
                      +++|+++|.+ .+|.||||+|+..++.++++.|+++..
T Consensus       343 l~~ga~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~~~  379 (446)
T PHA02946        343 LFNHFSVDSV-VNGHTCMSECVRLNNPVILSKLMLHNP  379 (446)
T ss_pred             HHCCCCCCCc-cccccHHHHHHHcCCHHHHHHHHhcCc
Confidence            9999999985 589999999999999999999999664

>KOG0508|consensus

Probab=100.00  E-value=5.4e-45  Score=382.16  Aligned_cols=509  Identities=26%  Similarity=0.248  Sum_probs=322.2

Q ss_pred             HHHhCCCHHHHHHHHhhCCC--cccccCCCCCCchHHHHHHhcCCHHHHHHHHhc-CCCCCCCCCCCccCCCChHHHHHh
Q psy8898         405 EASKGGDMTVVTRLLSSCPH--IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH-GADVHSKDNATDKWGFTPLHEAAQ  481 (1236)
Q Consensus       405 ~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~d~~g~t~L~~A~~  481 (1236)
                      .|++.|++..+..|+.....  ..........|.|||.+|+++||.++|+||+++ ++++.... ....+|.+.      
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~G-sV~FDge~I------   82 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGG-SVRFDGETI------   82 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCc-eEEeCCccc------
Confidence            67777877777766654211  112222222344999999999999999999995 77774432 222222210      


Q ss_pred             cCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHH
Q psy8898         482 KGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE  561 (1236)
Q Consensus       482 ~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~  561 (1236)
                                                                                   .|.+||+.|+..||+++|+
T Consensus        83 -------------------------------------------------------------egappLWaAsaAGHl~vVk  101 (615)
T KOG0508|consen   83 -------------------------------------------------------------EGAPPLWAASAAGHLEVVK  101 (615)
T ss_pred             -------------------------------------------------------------CCCchhhHHhccCcHHHHH
Confidence                                                                         2778999999999999999


Q ss_pred             HHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccc
Q psy8898         562 MLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRY  641 (1236)
Q Consensus       562 ~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  641 (1236)
                      .|+++|++||.......|||-                                                           
T Consensus       102 ~L~~~ga~VN~tT~TNStPLr-----------------------------------------------------------  122 (615)
T KOG0508|consen  102 LLLRRGASVNDTTRTNSTPLR-----------------------------------------------------------  122 (615)
T ss_pred             HHHHhcCccccccccCCccHH-----------------------------------------------------------
Confidence            999999998876655444443                                                           


Q ss_pred             cCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChH
Q psy8898         642 TWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRK  721 (1236)
Q Consensus       642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~  721 (1236)
                                                          .||-.|++++|++|++++.+....+..|.|.||+||-.   |+.
T Consensus       123 ------------------------------------aACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~yk---Gh~  163 (615)
T KOG0508|consen  123 ------------------------------------AACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYK---GHV  163 (615)
T ss_pred             ------------------------------------HHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeecc---Cch
Confidence                                                33556777777777777776666666677777777755   999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy8898         722 AIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTS  801 (1236)
Q Consensus       722 ~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~  801 (1236)
                      +|+++|++.|+|+|.++..|+|+||.|++.|++|++++|+++|+.++ +|..|.|||..|+..|+.++|.+|++..  .+
T Consensus       164 ~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~~~--~s  240 (615)
T KOG0508|consen  164 DIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQCE--TS  240 (615)
T ss_pred             HHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHhcCC--cc
Confidence            99999999999999999999999999999999999999999999887 6778999999999999999999999832  11


Q ss_pred             cccccchhHHHhhhchHHHHHHHHHhcCCHHHHhhcChhhhhhhCcccchhhhhhHHHHHHhhcC-CCCCC-CCcceeec
Q psy8898         802 IVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSS-PSFSQ-PGTLLIDL  879 (1236)
Q Consensus       802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~  879 (1236)
                      ..+            ..+-.+++.           ....+-+...+.++.+..+   .++.-.+. .+... ...+++..
T Consensus       241 r~~------------riealEllG-----------at~~dkk~D~~~al~~w~~---aMe~r~~~~e~~~e~e~~~p~~a  294 (615)
T KOG0508|consen  241 RES------------RIEALELLG-----------ATYVDKKRDLLGALKYWRR---AMEERESDGESILEKEPLEPVLA  294 (615)
T ss_pred             hhh------------HHHHHHHhc-----------ccccchhHHHHHHHHHHHH---HHHhhhhccccccccCCCCchhh
Confidence            111            011111110           0000001000111111111   11111110 00000 00011122


Q ss_pred             cCCChhhhhH-----------HHHHHHHHHhhccCCCCCCccccceeeeehhhchhhHHHHHHHHHHHHhhhcCC-----
Q psy8898         880 LSDDKEFITV-----------AEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGG-----  943 (1236)
Q Consensus       880 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  943 (1236)
                      +.+..+....           ...|+..+..+++.|++++..+.|.+++++.+.+...+++++..|++.-+..++     
T Consensus       295 y~~~re~~~~~elE~lv~D~d~~RmqaLiirerILgpsh~d~sYyir~rgavyad~g~~~rCi~LWkyAL~mqQk~l~Pl  374 (615)
T KOG0508|consen  295 YGYGREVNNREELEELVEDPDEMRMQALIIRERILGPSHPDVSYYIRYRGAVYADSGEFERCIRLWKYALDMQQKNLEPL  374 (615)
T ss_pred             hhhhhhcCCHHHHHHHhcChHHHHHHHHHHHHHHhCCCCCCceeEEEeeeeeecCCccHHHHHHHHHHHHHHHHhhcCCC
Confidence            2211111111           126889999999999999999999999999999999999999999987664433     


Q ss_pred             --cchhhhhcc---------------------CCchhhhhhhcccchhhHHHHhhhhhhhhcccCccchhhhhccCchHH
Q psy8898         944 --QAHERMLFH---------------------GSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFI 1000 (1236)
Q Consensus       944 --~~~~~~~~~---------------------~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1236)
                        ...+..+++                     +...++.+..++..+++...-+..  +..+.+........+.|....+
T Consensus       375 spmT~ssllsFaelFS~mL~d~~~~g~~~~~i~~~~~~~Vl~k~vlEvEra~~~t~--~p~d~~~~~k~l~~~lhLv~ll  452 (615)
T KOG0508|consen  375 SPMTASSLLSFAELFSFMLQDFAAKGSLGTQIGFDDLMGVLTKSVLEVERALALTR--EPLDPAQYNKALYIILHLVCLL  452 (615)
T ss_pred             CcccHHHHHHHHHHHHHHhhhhhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Confidence              122222221                     233344444444333332221111  1111111111111111111111


Q ss_pred             HHHHhcCcccccccccccccccce---eeeccccCcCchhhhcccccccccccccc-cc--ccccchhHhhcCCCCccCC
Q psy8898        1001 NAIVQKGFDERHAYIGGMFGAGKR---VWLGDVKQGVDQLSMAGGLETGTKKKKKN-MY--YGTLTPHNVKHGANVNVAD 1074 (1236)
Q Consensus      1001 ~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~g~t~L~~a~~~~~~~~~~~~~-~~--~~~~~~~l~~~~~~~~~~~ 1074 (1236)
                      ......   +....   .....+|   .-..+.+.|+||||+|+..++ +.+++.. +.  ...+++.|++.|+|||++|
T Consensus       453 ek~~ct---~e~~~---~k~~~iyrl~~l~pr~~~~ft~LH~av~~~t-t~~gry~v~~fPs~~V~k~Llecgadvna~D  525 (615)
T KOG0508|consen  453 EKVECT---PEQDH---LKHQTIYRLLKLAPRGKNGFTLLHLAVDKNT-TNVGRYPVCRFPSAHVTKVLLECGADVNARD  525 (615)
T ss_pred             HhcCCC---hHHHH---HHHHHHHHHHhccccccCCCchhhhhhccCC-CCCCcccccCCcHHHHHHHHHHcCCCCCccc
Confidence            100000   00000   0000111   012356789999999997774 3333333 33  3457899999999999999


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q psy8898        1075 LWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLV 1117 (1236)
Q Consensus      1075 ~~g~t~lh~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a 1117 (1236)
                      .+|+||||+|+++.+..+|..|++.||..+++|..|.||+.+-
T Consensus       526 ~~~ntplHIa~~~~~~si~~aLie~Gah~datN~~~~t~~~ll  568 (615)
T KOG0508|consen  526 FDNNTPLHIAAQNNCPSIVNALIEAGAHLDATNAHKKTALDLL  568 (615)
T ss_pred             CCCCchhHHHHHhccHHHHHHHHHcccchhhhhhccccHHHHh
Confidence            9999999999999999999999999999999999999999873

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=1.7e-43  Score=419.69  Aligned_cols=196  Identities=18%  Similarity=0.203  Sum_probs=165.7

Q ss_pred             CcHHHHHHHHHcC-CCcccc-CCCCcchhhHHhh--cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCC--ceEEe
Q psy8898           2 GRKDVVEYLLASG-ASIHAR-DDGGLHPLHNACS--FGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKT--DVCIG   75 (1236)
Q Consensus         2 G~~~~v~~Ll~~g-a~~n~~-d~~g~t~L~~A~~--~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~--~iv~~   75 (1236)
                      |+.++|++|++.| +++|.+ |..|+||||.|+.  +++.++|++|+++|+++|..|..|.||||+|+..|+.  ++|++
T Consensus       153 v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVkl  232 (764)
T PHA02716        153 IDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKK  232 (764)
T ss_pred             CCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHH
Confidence            6789999999999 999998 8999999999875  4689999999999999999999999999999999965  78877


Q ss_pred             eeccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhc---ccChHHHHHHHHhcCCCCCCCCC
Q psy8898          76 IYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTV---AEDVRSLLQDAMAQYPGAPSCAE  152 (1236)
Q Consensus        76 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~---~~~~~~~v~~l~~~~~~~~~~~~  152 (1236)
                                                     |+++||+++.++..|+||||+|+   .+++.++++.+++......    
T Consensus       233 -------------------------------LLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~----  277 (764)
T PHA02716        233 -------------------------------IIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK----  277 (764)
T ss_pred             -------------------------------HHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc----
Confidence                                           99999999999999999999885   4678899988876421000    


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHH
Q psy8898         153 TASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEM  232 (1236)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~  232 (1236)
                                                   ...         .|.                 -...+..|+..|+.+++++
T Consensus       278 -----------------------------~~~---------~~~-----------------~L~~~i~AA~~g~leiVkl  302 (764)
T PHA02716        278 -----------------------------VKN---------IPM-----------------ILHSYITLARNIDISVVYS  302 (764)
T ss_pred             -----------------------------ccc---------chh-----------------hhHHHHHHHHcCCHHHHHH
Confidence                                         000         000                 0012345889999999999


Q ss_pred             HHhcCCCCCCCCCCCCcHHHHHHH--cCcHHHHHHHHhCCCCCCCCCCCCCCccccc
Q psy8898         233 LIKAGANVNAMDLWQFTPLHEAAS--KSRLEVCSLLLSEGADPTLHNCHSKSAIDVA  287 (1236)
Q Consensus       233 Ll~~ga~~n~~d~~g~TpL~~A~~--~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a  287 (1236)
                      |++.|+++|.+|..|+||||+|+.  .++.+++++|+++|++++.+|..|+||||+|
T Consensus       303 LLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A  359 (764)
T PHA02716        303 FLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTY  359 (764)
T ss_pred             HHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHH
Confidence            999999999999999999999875  4688999999999999999999999987664

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=6.2e-43  Score=407.12  Aligned_cols=181  Identities=23%  Similarity=0.295  Sum_probs=129.4

Q ss_pred             CcHHHHHHHHHcCCCccccCCCCcchhhHHhh--cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeecc
Q psy8898           2 GRKDVVEYLLASGASIHARDDGGLHPLHNACS--FGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFA   79 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~--~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~   79 (1236)
                      |+.+.++.+++....     ..+.++||.++.  .++.++|++|+++|+++|.+|..|+||||+|+..|+.++|++    
T Consensus        20 ~n~~~~~~~l~~~~~-----~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~l----   90 (446)
T PHA02946         20 KNLDVFRNMLQAIEP-----SGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAM----   90 (446)
T ss_pred             CcHHHHHHHHhccCC-----CCCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHH----
Confidence            678999999985221     234789998774  457899999999999999999999999999999999999988    


Q ss_pred             ccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccCh--HHHHHHHHhcCCCCCCCCCCCCCC
Q psy8898          80 EHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDV--RSLLQDAMAQYPGAPSCAETASVP  157 (1236)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~--~~~v~~l~~~~~~~~~~~~~~~~~  157 (1236)
                                                 |+++|++++.+|.+|+||||+|+..+.  .++++.|+                
T Consensus        91 ---------------------------LL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl----------------  127 (446)
T PHA02946         91 ---------------------------LLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLV----------------  127 (446)
T ss_pred             ---------------------------HHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHH----------------
Confidence                                       999999999999999999988875432  33333333                


Q ss_pred             CCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc-----CCchHHHHHHhcCcHHHHHH
Q psy8898         158 PPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA-----LGLVPLHNACSYGHFEVTEM  232 (1236)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~-----~g~T~L~~Aa~~g~~~iv~~  232 (1236)
                                                                      ++|++++     .|.|||| ||..|+.+++++
T Consensus       128 ------------------------------------------------~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~  158 (446)
T PHA02946        128 ------------------------------------------------QYGAKINNSVDEEGCGPLL-ACTDPSERVFKK  158 (446)
T ss_pred             ------------------------------------------------HcCCCcccccCCCCCcHHH-HHHCCChHHHHH
Confidence                                                            3333322     3566665 455566666666


Q ss_pred             HHhcCCCCCCCCCCCCcHHHHHHHcCc--HHHHHHHHhCCCCCCCCCCCCCCc
Q psy8898         233 LIKAGANVNAMDLWQFTPLHEAASKSR--LEVCSLLLSEGADPTLHNCHSKSA  283 (1236)
Q Consensus       233 Ll~~ga~~n~~d~~g~TpL~~A~~~g~--~~iv~~Ll~~ga~~~~~~~~g~t~  283 (1236)
                      |++.|++++..|..|+||||+|+..++  .+++++|+++|++++.+|.+|.||
T Consensus       159 Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~Tp  211 (446)
T PHA02946        159 IMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTP  211 (446)
T ss_pred             HHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCH
Confidence            666666666666666666666655433  456666666666666555544444

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=1.7e-42  Score=411.21  Aligned_cols=279  Identities=18%  Similarity=0.149  Sum_probs=168.6

Q ss_pred             HHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHh--cCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHH
Q psy8898         403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAG--YNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAA  480 (1236)
Q Consensus       403 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~--~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~  480 (1236)
                      +..|++.|+.++++.|++. +.+++..+.+|  +||||+|+.  .++.+++++|+++|++++.    +|..|+||||+|+
T Consensus       288 ~i~AA~~g~leiVklLLe~-GAdIN~kD~~G--~TPLH~Aaa~~~~~~eIVklLLe~GADIN~----kD~~G~TPLH~A~  360 (764)
T PHA02716        288 YITLARNIDISVVYSFLQP-GVKLHYKDSAG--RTCLHQYILRHNISTDIIKLLHEYGNDLNE----PDNIGNTVLHTYL  360 (764)
T ss_pred             HHHHHHcCCHHHHHHHHhC-CCceeccCCCC--CCHHHHHHHHhCCCchHHHHHHHcCCCCcc----CCCCCCCHHHHHH
Confidence            3457889999999999987 78888887766  499999864  4689999999999999954    4559999999987


Q ss_pred             hcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHH
Q psy8898         481 QKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVT  560 (1236)
Q Consensus       481 ~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv  560 (1236)
                      ....  ++..+                                      +.                  .+...++.+++
T Consensus       361 ~~la--v~~~l--------------------------------------d~------------------~~~~~~~~eVV  382 (764)
T PHA02716        361 SMLS--VVNIL--------------------------------------DP------------------ETDNDIRLDVI  382 (764)
T ss_pred             Hhhh--hhccc--------------------------------------cc------------------cccccChHHHH
Confidence            5311  00000                                      00                  01124788999


Q ss_pred             HHHHhCCCCCccCCCCCCCHHHHH-----------HHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHH
Q psy8898         561 EMLVKHGANVNVADLWKFTPLHEA-----------AAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLE  629 (1236)
Q Consensus       561 ~~Ll~~g~~v~~~d~~g~tpL~~a-----------~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~  629 (1236)
                      ++|+++|++++.+|..|.||||.+           ++++|++.|+.....+..++.-+.                     
T Consensus       383 klLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~---------------------  441 (764)
T PHA02716        383 QCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLI---------------------  441 (764)
T ss_pred             HHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhh---------------------
Confidence            999999999999999999999842           145777776554333221110000                     


Q ss_pred             HHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHH
Q psy8898         630 AARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPL  709 (1236)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L  709 (1236)
                                                           ..+ .....++.++..++.+...++.......           
T Consensus       442 -------------------------------------~~d-~~~~~lhh~~a~~~~~~~~~~~~~~~~~-----------  472 (764)
T PHA02716        442 -------------------------------------RVD-DTPCIIHHIIAKYNIPTDLYTDEYEPYD-----------  472 (764)
T ss_pred             -------------------------------------ccC-cchhhHHHHHHhcCcchhhhhhhhhhcc-----------
Confidence                                                 000 0111233333333333222211111000           


Q ss_pred             HHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCH-----HHHHHHHHCCCCccccCCCCCcHHHHHHHc
Q psy8898         710 HCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHL-----DVLDTLLRLGAKVNLVDVLGQTALHRTARD  784 (1236)
Q Consensus       710 ~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~-----~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~  784 (1236)
                             ......++..++..+.++|.+|..|+||||+|+..|+.     +++++|++.|+++|.+|++|+||||+|+++
T Consensus       473 -------~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~  545 (764)
T PHA02716        473 -------STKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRN  545 (764)
T ss_pred             -------ccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHc
Confidence                   00112344444445566666677777777777766654     334777777777777777777777777776


Q ss_pred             CCH-----HHHHHHHhCCCCCCcccccchhHHHhhhchHHHHHHHHHh
Q psy8898         785 DKT-----QAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFERE  827 (1236)
Q Consensus       785 ~~~-----~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  827 (1236)
                      |+.     ++|++||++|++++...    +..+......++..++.+.
T Consensus       546 g~~~~~~~eIvk~LL~~ga~~~~~~----l~~~~~~~~~~~~~ll~~~  589 (764)
T PHA02716        546 NRLSGHQWYIVKNILDKRPNVDIVI----IFLDKCYANGKFPSLLLSE  589 (764)
T ss_pred             CCccccHHHHHHHHHhcCCCcchHH----HHHHhhhhhhHHHHHHHHc
Confidence            655     67777777776666652    2333334444444444443

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=5.4e-40  Score=381.57  Aligned_cols=447  Identities=15%  Similarity=0.091  Sum_probs=271.6

Q ss_pred             HHhcCcCCcccc-----CCchHHHHHHhcC---cHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHhCC
Q psy8898         201 ETVIMPSGQAVA-----LGLVPLHNACSYG---HFEVTEMLIKAGANVNAMDLWQFTPLHEAASKS--RLEVCSLLLSEG  270 (1236)
Q Consensus       201 ~~~Ll~~g~~~~-----~g~T~L~~Aa~~g---~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g--~~~iv~~Ll~~g  270 (1236)
                      +++.++.-++++     .|+||||+|+..|   +.++|++|+++||+++.+|..|+||||+|+..+  +.|+|++|+++|
T Consensus        23 ~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~  102 (672)
T PHA02730         23 IKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSY  102 (672)
T ss_pred             HHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcC
Confidence            555555543433     7999999999987   589999999999999999999999999999866  799999999997


Q ss_pred             CCC--CCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhh
Q psy8898         271 ADP--TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLS  348 (1236)
Q Consensus       271 a~~--~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~  348 (1236)
                      +++  +..+..+.+||+.                                                              
T Consensus       103 ~~~~~~~~~~~~d~~l~~--------------------------------------------------------------  120 (672)
T PHA02730        103 SNASNELTSNINDFDLYS--------------------------------------------------------------  120 (672)
T ss_pred             CCCCcccccccCCchHHH--------------------------------------------------------------
Confidence            654  5444444444222                                                              


Q ss_pred             cChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccc
Q psy8898         349 DDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNC  428 (1236)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~  428 (1236)
                                                                             ..++.+++.++|++|++..+.+++.
T Consensus       121 -------------------------------------------------------y~~s~n~~~~~vk~Li~~~~~~~~~  145 (672)
T PHA02730        121 -------------------------------------------------------YMSSDNIDLRLLKYLIVDKRIRPSK  145 (672)
T ss_pred             -------------------------------------------------------HHHhcCCcHHHHHHHHHhcCCChhh
Confidence                                                                   1234588888999998754666654


Q ss_pred             cCC---CCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCC---CCCCccCCCC-hHHHHHhcCchHHHhhcCCCCCCCCCc
Q psy8898         429 RDL---DGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSK---DNATDKWGFT-PLHEAAQKGRTQLSALLPLSPSAANDP  501 (1236)
Q Consensus       429 ~~~---~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~---~~~~d~~g~t-~L~~A~~~~~~~iv~~L~~~~~~~~~~  501 (1236)
                      ...   .+.|.+|++++...+++++|++|+++|++++--   ....+..+++ .||+++....                 
T Consensus       146 ~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~-----------------  208 (672)
T PHA02730        146 NTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHR-----------------  208 (672)
T ss_pred             hhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhh-----------------
Confidence            422   145679999999999999999999999998411   1112233443 3443443211                 


Q ss_pred             hhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHH
Q psy8898         502 LRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPL  581 (1236)
Q Consensus       502 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL  581 (1236)
                                                                       +..+++.|++++|+++|+++|.+|..|.|||
T Consensus       209 -------------------------------------------------~~~~n~~eiv~lLIs~GadIN~kd~~G~TpL  239 (672)
T PHA02730        209 -------------------------------------------------ESESLSKDVIKCLIDNNVSIHGRDEGGSLPI  239 (672)
T ss_pred             -------------------------------------------------hhhccCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence                                                             1123444555555555555555555555555


Q ss_pred             HH--HH-------HHHHHhcCCCCcccCC-C---CCChhhhhcccCcccc--cCCchhHHHHHHHHHhCCCcccccCCCC
Q psy8898         582 HE--AA-------AKALLQHGADINLKNT-D---GKTALDLAVPCTRAVL--SGDHKKEELLEAARMMGGGLHRYTWPLG  646 (1236)
Q Consensus       582 ~~--a~-------~~~Ll~~g~d~~~~~~-~---g~t~L~~a~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~  646 (1236)
                      |+  +.       +++|++.-.+.+.-+. .   -+..|+-.........  .-+..++++|.+   .+..++...-...
T Consensus       240 h~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~---~~~~~~~~~~~~~  316 (672)
T PHA02730        240 QYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIE---GRHTLIDVMRSIT  316 (672)
T ss_pred             HHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhh---ccCcchhhhhccc
Confidence            42  11       3344441111110000 0   0000000000000000  001112222221   0000000000000


Q ss_pred             CCCCCccc-ccccccccccccchhhccccHHHHHHHcC---CHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCC-ChH
Q psy8898         647 TTDIGWCS-CCCKMELMFMPRIKDEFKGHCLLEACRQG---DPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYP-KRK  721 (1236)
Q Consensus       647 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~-~~~  721 (1236)
                      ..+..... ....+.+...-.+-...-+-.|+.-.+.+   +.++++.|+++|...... ..|+||||+|+..+.+ -+.
T Consensus       317 ~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~  395 (672)
T PHA02730        317 SYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDV  395 (672)
T ss_pred             cccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchH
Confidence            00000000 00000000000000000112455555544   689999999999877765 6799999999986110 128


Q ss_pred             HHHHHHHHcCC--CCCCCCCCCchHHHH---HHHhC---------CHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCH
Q psy8898         722 AIVESLIRKGA--HLNEKNKELLAPIHL---AADLG---------HLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKT  787 (1236)
Q Consensus       722 ~iv~~Ll~~ga--din~~d~~G~T~Lh~---A~~~g---------~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~  787 (1236)
                      +++++|+++|+  ++|.+|..|+||||.   |...+         ..+++++|+++||++|.+|..|+||||+|+..++.
T Consensus       396 eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~  475 (672)
T PHA02730        396 NVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNI  475 (672)
T ss_pred             HHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCH
Confidence            99999999997  699999999999994   33332         23679999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCccc---ccchhHHHhh--hchHHHHHHHHHhcCCHHHH
Q psy8898         788 QAVRVLLSHNADTSIVS---LLVIFSCSTN--LGLKHLLELFEREQITLDIL  834 (1236)
Q Consensus       788 ~iv~~Ll~~ga~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  834 (1236)
                      +++++|+++||+++..+   +.+++..+..  .+..++++++.+.+...+..
T Consensus       476 eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~~I  527 (672)
T PHA02730        476 QFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLETM  527 (672)
T ss_pred             HHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHHHH
Confidence            99999999999999886   3566666654  35788999999888777653

>KOG0510|consensus

Probab=100.00  E-value=6.8e-40  Score=367.05  Aligned_cols=393  Identities=27%  Similarity=0.372  Sum_probs=287.1

Q ss_pred             HHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccc
Q psy8898           8 EYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQ   87 (1236)
Q Consensus         8 ~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~   87 (1236)
                      +.++.---+++..+.+-.++.+.+...   |.++++++..+.++..+..|.|++|.|+..+..                 
T Consensus        15 ea~~~~~~~~~~~~~d~~~~~~~~~~d---D~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~-----------------   74 (929)
T KOG0510|consen   15 EALLLAKQDIRQPVADLDSQALADTLD---DRHTLILEKNSSTPGKRAFGDTELHHASARNYI-----------------   74 (929)
T ss_pred             HHhhhhhhhhhhhhHHHhHHHHHhhHH---HHHHHHHHhccccchhhhhchhHHHHHHhhcch-----------------
Confidence            334333334555555545565555544   778888888778888888899999999887754                 


Q ss_pred             cccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCccccccc
Q psy8898          88 YVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSC  167 (1236)
Q Consensus        88 ~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (1236)
                                          ++.-+.....|..|.||||+|+.....+.|+.+++.                        
T Consensus        75 --------------------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~------------------------  110 (929)
T KOG0510|consen   75 --------------------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSY------------------------  110 (929)
T ss_pred             --------------------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhc------------------------
Confidence                                112234456677888888888887777776666543                        


Q ss_pred             CCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CCchHHHHHHhcCcHHHHHHHHhcCCCCCCC
Q psy8898         168 GDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LGLVPLHNACSYGHFEVTEMLIKAGANVNAM  243 (1236)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~  243 (1236)
                                                              |++.+    .+.+|||+|+..|+.++++.|+++|+|+|..
T Consensus       111 ----------------------------------------gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~  150 (929)
T KOG0510|consen  111 ----------------------------------------GADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLE  150 (929)
T ss_pred             ----------------------------------------CCCCChhhhhccCchhhccccchHHHHHHHHHhcCCcccc
Confidence                                                    33333    5778888888888888888888888888888


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhc
Q psy8898         244 DLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTS  323 (1236)
Q Consensus       244 d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~  323 (1236)
                      |..|+||||+||..++.|..+.|++.|++|...|.+|..|                     ++.|+++|..+.++.++..
T Consensus       151 de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~---------------------iH~aa~s~s~e~mEi~l~~  209 (929)
T KOG0510|consen  151 DENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFP---------------------IHEAARSGSKECMEIFLPE  209 (929)
T ss_pred             ccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCch---------------------HHHHHHhcchhhhhhhhcc
Confidence            8888889999998888888888888888888887776666                     4555666666666555542


Q ss_pred             ccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHH
Q psy8898         324 DVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQL  403 (1236)
Q Consensus       324 ~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L  403 (1236)
                      ....                                                                            
T Consensus       210 ~g~~----------------------------------------------------------------------------  213 (929)
T KOG0510|consen  210 HGYE----------------------------------------------------------------------------  213 (929)
T ss_pred             ccch----------------------------------------------------------------------------
Confidence            1100                                                                            


Q ss_pred             HHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcC
Q psy8898         404 LEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG  483 (1236)
Q Consensus       404 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~  483 (1236)
                                       + ...+|..+..+.  ||||.|++.|++++++..|+.|+.......                 
T Consensus       214 -----------------r-~~~in~~~n~~~--~pLhlAve~g~~e~lk~~L~n~~~~a~~~~-----------------  256 (929)
T KOG0510|consen  214 -----------------R-QTHINFDNNEKA--TPLHLAVEGGDIEMLKMCLQNGKKIADVQL-----------------  256 (929)
T ss_pred             -----------------h-hcccccccCCCC--cchhhhhhcCCHHHHHHHHhCccccchhhh-----------------
Confidence                             1 334555555554  899999999999999999888764421100                 


Q ss_pred             chHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHH
Q psy8898         484 RTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEML  563 (1236)
Q Consensus       484 ~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~L  563 (1236)
                                                  +.....+.|+...     |.           .|.||||+||+.|+.++|+.|
T Consensus       257 ----------------------------~~~~q~kelv~~~-----d~-----------dg~tpLH~a~r~G~~~svd~L  292 (929)
T KOG0510|consen  257 ----------------------------DAMQQEKELVNDE-----DN-----------DGCTPLHYAARQGGPESVDNL  292 (929)
T ss_pred             ----------------------------HHHHHHHHHhhcc-----cc-----------cCCchHHHHHHcCChhHHHHH
Confidence                                        0112223333322     22           288999999999999999999


Q ss_pred             HhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccC
Q psy8898         564 VKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTW  643 (1236)
Q Consensus       564 l~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  643 (1236)
                      +..|++++.++                          .++.|||                                    
T Consensus       293 l~~Ga~I~~kn--------------------------~d~~spL------------------------------------  310 (929)
T KOG0510|consen  293 LGFGASINSKN--------------------------KDEESPL------------------------------------  310 (929)
T ss_pred             HHcCCcccccC--------------------------CCCCCch------------------------------------
Confidence            99888776544                          3334433                                    


Q ss_pred             CCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhc-cCC-cccCCCCCCChHHHHHhhCCCCChH
Q psy8898         644 PLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLT-SDV-VNFKHPYTGDTPLHCAVTSPYPKRK  721 (1236)
Q Consensus       644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~-~~~-~~~~~~~~g~t~L~~A~~~~~~~~~  721 (1236)
                                                       |.|+..|+.+.|+.||+ .+. .....|..|.||||+|+++   ||.
T Consensus       311 ---------------------------------H~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~---gH~  354 (929)
T KOG0510|consen  311 ---------------------------------HFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKS---GHD  354 (929)
T ss_pred             ---------------------------------HHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhc---CHH
Confidence                                             44467899999999999 332 3334445599999999987   999


Q ss_pred             HHHHHHHHcCCCCC---CCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHH
Q psy8898         722 AIVESLIRKGAHLN---EKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHR  780 (1236)
Q Consensus       722 ~iv~~Ll~~gadin---~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~  780 (1236)
                      .+++.|+..|++.+   ..|.+|.||||+|+..|+..+|++|+.+||++...|+.|.|++++
T Consensus       355 ~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  355 RVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             HHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence            99999999999987   569999999999999999999999999999999999999999985

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.8e-37  Score=363.01  Aligned_cols=53  Identities=28%  Similarity=0.325  Sum_probs=44.2

Q ss_pred             CcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC
Q psy8898         225 GHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHN  277 (1236)
Q Consensus       225 g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~  277 (1236)
                      .+.+++++|++.|++++.+|..|.||||+|+..|+.++|++|+++|++++.++
T Consensus       102 ~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d  154 (434)
T PHA02874        102 IEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIED  154 (434)
T ss_pred             CCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcC
Confidence            45678888888899888888889999999999998899998888888776543

>KOG0510|consensus

Probab=100.00  E-value=4.8e-38  Score=352.25  Aligned_cols=355  Identities=33%  Similarity=0.370  Sum_probs=291.1

Q ss_pred             HHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCcc
Q psy8898           5 DVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSK   84 (1236)
Q Consensus         5 ~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~   84 (1236)
                      |.++.++++....+.++..|.|++|.|+..+..      ++.-+.....|..|.||||+|+.....+.++.         
T Consensus        42 D~~tli~~kns~~~~~~~~gd~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~---------  106 (929)
T KOG0510|consen   42 DRHTLILEKNSSTPGKRAFGDTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQV---------  106 (929)
T ss_pred             HHHHHHHHhccccchhhhhchhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHH---------
Confidence            567888888888999999999999999998876      33445667889999999999999999999987         


Q ss_pred             ccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccc
Q psy8898          85 SNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSN  164 (1236)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~  164 (1236)
                                            |++.|++++..|..+.+|+|+|+..++...++.|++.                     
T Consensus       107 ----------------------Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~---------------------  143 (929)
T KOG0510|consen  107 ----------------------LLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDY---------------------  143 (929)
T ss_pred             ----------------------HHhcCCCCChhhhhccCchhhccccchHHHHHHHHHh---------------------
Confidence                                  9999999999999999999999999988887766654                     


Q ss_pred             cccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CCchHHHHHHhcCcHHHHHHHHhcCCCC
Q psy8898         165 TSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LGLVPLHNACSYGHFEVTEMLIKAGANV  240 (1236)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~  240 (1236)
                                                                 |++++    .|+||||.||..++.|..+.|++.|+++
T Consensus       144 -------------------------------------------~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~  180 (929)
T KOG0510|consen  144 -------------------------------------------GADVNLEDENGFTPLHLAARKNKVEAKKELINKGADP  180 (929)
T ss_pred             -------------------------------------------cCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCC
Confidence                                                       44444    6899999999999999889999999999


Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHh-----CCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChH
Q psy8898         241 NAMDLWQFTPLHEAASKSRLEVCSLLLS-----EGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPS  315 (1236)
Q Consensus       241 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~-----~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~  315 (1236)
                      ...|.+|.+|+|.|++.|..|+.++.+.     ++..+|.-+..+.||                     |+.|+..|+++
T Consensus       181 ~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~p---------------------LhlAve~g~~e  239 (929)
T KOG0510|consen  181 CKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATP---------------------LHLAVEGGDIE  239 (929)
T ss_pred             CcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcc---------------------hhhhhhcCCHH
Confidence            9999999999999999999999999998     678899999888888                     55579999999


Q ss_pred             HHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCC
Q psy8898         316 RVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPS  395 (1236)
Q Consensus       316 ~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~  395 (1236)
                      .++.+|..+......                                                                 
T Consensus       240 ~lk~~L~n~~~~a~~-----------------------------------------------------------------  254 (929)
T KOG0510|consen  240 MLKMCLQNGKKIADV-----------------------------------------------------------------  254 (929)
T ss_pred             HHHHHHhCccccchh-----------------------------------------------------------------
Confidence            999999765422110                                                                 


Q ss_pred             cCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCCh
Q psy8898         396 VVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTP  475 (1236)
Q Consensus       396 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~  475 (1236)
                                  +.+.....+.|       ++..|.+|  .||||+|++.|+++.|+.|+..|++++.++    .++.||
T Consensus       255 ------------~~~~~~q~kel-------v~~~d~dg--~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn----~d~~sp  309 (929)
T KOG0510|consen  255 ------------QLDAMQQEKEL-------VNDEDNDG--CTPLHYAARQGGPESVDNLLGFGASINSKN----KDEESP  309 (929)
T ss_pred             ------------hhHHHHHHHHH-------hhcccccC--CchHHHHHHcCChhHHHHHHHcCCcccccC----CCCCCc
Confidence                        00001112222       34455555  599999999999999999999999995554    599999


Q ss_pred             HHHHHhcCchHHHhhcCC-CCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhc
Q psy8898         476 LHEAAQKGRTQLSALLPL-SPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSY  554 (1236)
Q Consensus       476 L~~A~~~~~~~iv~~L~~-~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~  554 (1236)
                      ||.|++.|+.+.++-|++ .+.+                           ..+..|.           .|+||||.|+++
T Consensus       310 LH~AA~yg~~ntv~rLL~~~~~r---------------------------llne~D~-----------~g~tpLHlaa~~  351 (929)
T KOG0510|consen  310 LHFAAIYGRINTVERLLQESDTR---------------------------LLNESDL-----------HGMTPLHLAAKS  351 (929)
T ss_pred             hHHHHHcccHHHHHHHHhCcCcc---------------------------ccccccc-----------cCCCchhhhhhc
Confidence            999999888877777654 1110                           1111111           288999999999


Q ss_pred             CcHHHHHHHHhCCCCCc---cCCCCCCCHHHHHH-------HHHHHhcCCCCcccCCCCCChhhh
Q psy8898         555 GHYEVTEMLVKHGANVN---VADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDL  609 (1236)
Q Consensus       555 g~~~iv~~Ll~~g~~v~---~~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~~~~g~t~L~~  609 (1236)
                      ||.++++.|+++|+...   ..|++|.||||+|+       +++|+.+|+++..+|+.|.|++++
T Consensus       352 gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  352 GHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             CHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence            99999999999998877   56899999999987       679999999999999999999985

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=8.7e-37  Score=360.78  Aligned_cols=305  Identities=24%  Similarity=0.315  Sum_probs=256.8

Q ss_pred             hHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHH
Q psy8898         401 SQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAA  480 (1236)
Q Consensus       401 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~  480 (1236)
                      ..|..|+..|+++.++.|++..+..++..+.++  .||||.|+..|+.++|++|+++|++++.    .+..|.|||++|+
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~--~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~----~~~~~~t~L~~A~   76 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVDET--TTPLIDAIRSGDAKIVELFIKHGADINH----INTKIPHPLLTAI   76 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCC--CCHHHHHHHcCCHHHHHHHHHCCCCCCC----CCCCCCCHHHHHH
Confidence            358899999999999999998777777776665  4999999999999999999999999954    4558999999999


Q ss_pred             hcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCC-CcccccccCCCCchhhhhccchhHHHHHhcCcHHH
Q psy8898         481 QKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQ-TVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEV  559 (1236)
Q Consensus       481 ~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~i  559 (1236)
                      ..|+.+++++|++.+.....      .+....+.++++++++.+ +++..+..           |.||||+|+..|+.++
T Consensus        77 ~~~~~~iv~~Ll~~g~~~~~------~~~~~~~~~~i~~ll~~g~d~n~~~~~-----------g~T~Lh~A~~~~~~~~  139 (434)
T PHA02874         77 KIGAHDIIKLLIDNGVDTSI------LPIPCIEKDMIKTILDCGIDVNIKDAE-----------LKTFLHYAIKKGDLES  139 (434)
T ss_pred             HcCCHHHHHHHHHCCCCCCc------chhccCCHHHHHHHHHCcCCCCCCCCC-----------CccHHHHHHHCCCHHH
Confidence            99999999999988765432      123345678888888764 33333322           7788999999999999


Q ss_pred             HHHHHhCCCCCccCCCCCCCHHHHHH-------HHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHH
Q psy8898         560 TEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAAR  632 (1236)
Q Consensus       560 v~~Ll~~g~~v~~~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~  632 (1236)
                      |++|+++|++++.+|..|.||||+|+       +++|+++|++++..+..|.||||+|                      
T Consensus       140 v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A----------------------  197 (434)
T PHA02874        140 IKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNA----------------------  197 (434)
T ss_pred             HHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH----------------------
Confidence            99999999999888888888888886       5688888888887777777666655                      


Q ss_pred             HhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHH
Q psy8898         633 MMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCA  712 (1236)
Q Consensus       633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A  712 (1236)
                                                                     +..|+.+++++|++.+......+..|.||||+|
T Consensus       198 -----------------------------------------------~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A  230 (434)
T PHA02874        198 -----------------------------------------------AEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNA  230 (434)
T ss_pred             -----------------------------------------------HHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHH
Confidence                                                           678899999999999987777777899999999


Q ss_pred             hhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhC-CHHHHHHHHHCCCCccccCCCCCcHHHHHHHcC-CHHHH
Q psy8898         713 VTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLG-HLDVLDTLLRLGAKVNLVDVLGQTALHRTARDD-KTQAV  790 (1236)
Q Consensus       713 ~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g-~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~-~~~iv  790 (1236)
                      +..    +.+++++|+ .|+++|.+|..|+||||+|++.+ +.+++++|+++|++++.+|..|+|||++|++.+ +.+++
T Consensus       231 ~~~----~~~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~i  305 (434)
T PHA02874        231 IIH----NRSAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVI  305 (434)
T ss_pred             HHC----ChHHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHH
Confidence            984    356777777 68999999999999999999976 789999999999999999999999999999987 78899


Q ss_pred             HHHHhCCCCCCc
Q psy8898         791 RVLLSHNADTSI  802 (1236)
Q Consensus       791 ~~Ll~~ga~~~~  802 (1236)
                      +.|+++++....
T Consensus       306 k~ll~~~~~~~~  317 (434)
T PHA02874        306 KDIIANAVLIKE  317 (434)
T ss_pred             HHHHHhcCchhh
Confidence            999999876543

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=6.8e-36  Score=359.99  Aligned_cols=295  Identities=28%  Similarity=0.335  Sum_probs=225.7

Q ss_pred             HHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC---cHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHH
Q psy8898         219 HNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKS---RLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQR  295 (1236)
Q Consensus       219 ~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g---~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~  295 (1236)
                      ..++..++.++|++|+++|+++|..+..|.||||+|+..+   +.+++++|+++|++++.++..|.||            
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~Tp------------   86 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTP------------   86 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCH------------
Confidence            5678889999999999999999999999999999999998   9999999999999999888766665            


Q ss_pred             hhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCC
Q psy8898         296 LSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGG  375 (1236)
Q Consensus       296 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  375 (1236)
                                                                                                      
T Consensus        87 --------------------------------------------------------------------------------   86 (471)
T PHA03095         87 --------------------------------------------------------------------------------   86 (471)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCC-CHHHHHHHHhhCCCcccccCCCCCCchHHHHHH--hcCCHHHHH
Q psy8898         376 YTALQVAGENSKKLLQEPPSVVDLESQLLEASKGG-DMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAA--GYNRVAVVE  452 (1236)
Q Consensus       376 ~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~--~~g~~~iv~  452 (1236)
                                                 ||.|+..| ..++++.|++. +.+++..+..|  +||||+|+  ..++.++++
T Consensus        87 ---------------------------Lh~A~~~~~~~~iv~lLl~~-ga~in~~~~~g--~tpLh~a~~~~~~~~~iv~  136 (471)
T PHA03095         87 ---------------------------LHLYLYNATTLDVIKLLIKA-GADVNAKDKVG--RTPLHVYLSGFNINPKVIR  136 (471)
T ss_pred             ---------------------------HHHHHHcCCcHHHHHHHHHc-CCCCCCCCCCC--CCHHHHHhhCCcCCHHHHH
Confidence                                       33444555 46777777776 66777766655  48888888  556788888


Q ss_pred             HHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCccccccc
Q psy8898         453 YLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTA  532 (1236)
Q Consensus       453 ~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  532 (1236)
                      +|+++|++++.    .|..|.||||+|+..+                                                 
T Consensus       137 ~Ll~~gad~~~----~d~~g~tpL~~a~~~~-------------------------------------------------  163 (471)
T PHA03095        137 LLLRKGADVNA----LDLYGMTPLAVLLKSR-------------------------------------------------  163 (471)
T ss_pred             HHHHcCCCCCc----cCCCCCCHHHHHHHcC-------------------------------------------------
Confidence            88888888844    3446666666555421                                                 


Q ss_pred             CCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcc
Q psy8898         533 GRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVP  612 (1236)
Q Consensus       533 ~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~  612 (1236)
                                           .++.+++++|+++|++++..|..|.||||+++..                         
T Consensus       164 ---------------------~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~-------------------------  197 (471)
T PHA03095        164 ---------------------NANVELLRLLIDAGADVYAVDDRFRSLLHHHLQS-------------------------  197 (471)
T ss_pred             ---------------------CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHH-------------------------
Confidence                                 2346777888877777766666666666655310                         


Q ss_pred             cCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhh
Q psy8898         613 CTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFL  692 (1236)
Q Consensus       613 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll  692 (1236)
                                                                                          ..++.++++.|+
T Consensus       198 --------------------------------------------------------------------~~~~~~i~~~Ll  209 (471)
T PHA03095        198 --------------------------------------------------------------------FKPRARIVRELI  209 (471)
T ss_pred             --------------------------------------------------------------------CCCcHHHHHHHH
Confidence                                                                                012334444445


Q ss_pred             ccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCC
Q psy8898         693 TSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDV  772 (1236)
Q Consensus       693 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~  772 (1236)
                      +.+......+..|+||||+|+..+. ....+++.|+++|+++|.+|..|+||||+|+..|+.++|++|+++|+++|.+|.
T Consensus       210 ~~g~~~~~~d~~g~tpLh~Aa~~~~-~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~  288 (471)
T PHA03095        210 RAGCDPAATDMLGNTPLHSMATGSS-CKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSS  288 (471)
T ss_pred             HcCCCCcccCCCCCCHHHHHHhcCC-chHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence            4444444444445666666665411 134688899999999999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q psy8898         773 LGQTALHRTARDDKTQAVRVLLSHNADTSIV  803 (1236)
Q Consensus       773 ~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  803 (1236)
                      +|+||||+|+.+|+.+++++|++++++++..
T Consensus       289 ~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~  319 (471)
T PHA03095        289 DGNTPLSLMVRNNNGRAVRAALAKNPSAETV  319 (471)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHhCCCHHHH
Confidence            9999999999999999999999999887654

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.5e-35  Score=338.61  Aligned_cols=381  Identities=15%  Similarity=0.115  Sum_probs=267.7

Q ss_pred             CCchHHHH-HHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH-cCcHHHHHHHHhCCCCCCCCCCCCCCccccccch
Q psy8898         213 LGLVPLHN-ACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAAS-KSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTR  290 (1236)
Q Consensus       213 ~g~T~L~~-Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~-~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~  290 (1236)
                      +|.+++|+ |+.+|++|+|++|+++||++|.++..|.||||+|+. .++.|++++|+++||++...+..|.||++-..++
T Consensus        70 ~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~  149 (631)
T PHA02792         70 NDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITR  149 (631)
T ss_pred             CCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccc
Confidence            67789988 455899999999999999999999999999999966 6999999999999999988888888885443111


Q ss_pred             hHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccC
Q psy8898         291 ELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDN  370 (1236)
Q Consensus       291 ~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (1236)
                      .                                +..++...                                       
T Consensus       150 ~--------------------------------~~~~~~~~---------------------------------------  158 (631)
T PHA02792        150 A--------------------------------EYYNWDDE---------------------------------------  158 (631)
T ss_pred             c--------------------------------cccchhhh---------------------------------------
Confidence            0                                00000000                                       


Q ss_pred             CCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcC----
Q psy8898         371 GQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYN----  446 (1236)
Q Consensus       371 ~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g----  446 (1236)
                                                            ..+.        ..+..+|..+..|  .||||+|+..+    
T Consensus       159 --------------------------------------~~~~--------~~~~~i~~~~~~g--~t~L~~~i~~~s~~~  190 (631)
T PHA02792        159 --------------------------------------LDDY--------DYDYTTDYDDRMG--KTVLYYYIITRSQDG  190 (631)
T ss_pred             --------------------------------------cccc--------ccccccccCCCCC--CchHHHHHhhCCccc
Confidence                                                  0000        0123345555544  59999999999    


Q ss_pred             ---CHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcC--chHHHhhcCCCCCCCCCchhHHHHHHh------c--CC
Q psy8898         447 ---RVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG--RTQLSALLPLSPSAANDPLRELFEACK------G--GD  513 (1236)
Q Consensus       447 ---~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~--~~~iv~~L~~~~~~~~~~~~~L~~A~~------~--g~  513 (1236)
                         +.|++++|+++|++++    ..|..|.||||+|+.+.  ..+++++|+............|..-.+      .  -+
T Consensus       191 ~~~~~~v~k~Li~~g~~~~----~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id  266 (631)
T PHA02792        191 YATSLDVINYLISHEKEMR----YYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKID  266 (631)
T ss_pred             ccCCHHHHHHHHhCCCCcC----ccCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCcc
Confidence               8999999999999994    45558999999999999  899999998865444444433333221      1  23


Q ss_pred             hHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcC
Q psy8898         514 LTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHG  593 (1236)
Q Consensus       514 ~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g  593 (1236)
                      ..+|..|++.......-..   .+++..  ..+...  .......+++-|+..-..      .+  -.+.-++++|+++|
T Consensus       267 ~~iv~~ll~~~~~~~i~~~---~~~~~~--~~~~~~--~~~~~~~~~q~~l~~Yl~------~~--~v~ieiIK~LId~G  331 (631)
T PHA02792        267 NYIVDKLLSGHDTFYILEL---CNSLRN--NIIISS--ILKRYTDSIQDLLSEYVS------YH--TVYINVIKCMIDEG  331 (631)
T ss_pred             HHHHHHHHhCCCccchhhh---hhhhhh--hhHHHH--HHHHHhHHHHHHHHHHHh------cC--CccHHHHHHHHHCC
Confidence            4488888876542111000   000000  001111  111111344444432100      00  13445577888888


Q ss_pred             CCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccc
Q psy8898         594 ADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKG  673 (1236)
Q Consensus       594 ~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (1236)
                      ++.+.     .+  +                                                                .
T Consensus       332 a~~~r-----~~--~----------------------------------------------------------------~  340 (631)
T PHA02792        332 ATLYR-----FK--H----------------------------------------------------------------I  340 (631)
T ss_pred             Ccccc-----CC--c----------------------------------------------------------------c
Confidence            77631     00  1                                                                1


Q ss_pred             cHHHHHHHcCCHHHHHHhhccCCcccCCCCC--CChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHh
Q psy8898         674 HCLLEACRQGDPSRVKKFLTSDVVNFKHPYT--GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADL  751 (1236)
Q Consensus       674 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~  751 (1236)
                      .+++.|+..|+.++|++|+++|......+..  +.||||+|+........+++++|+++|+|+|.+|..|+||||+|+..
T Consensus       341 n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~  420 (631)
T PHA02792        341 NKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIES  420 (631)
T ss_pred             hHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHc
Confidence            2467789999999999999999877666655  46999998875322335678999999999999999999999999999


Q ss_pred             CCHHHHHHHHHCCCCccccCCCCCcHHHHHHH----------cCCHHHHHHHHhCCCCCCc
Q psy8898         752 GHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR----------DDKTQAVRVLLSHNADTSI  802 (1236)
Q Consensus       752 g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~----------~~~~~iv~~Ll~~ga~~~~  802 (1236)
                      ++.+++++|+++|+++|.+|..|+|||++|+.          ....+++++|+++|++++.
T Consensus       421 ~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~~  481 (631)
T PHA02792        421 HSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIEC  481 (631)
T ss_pred             CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChhH
Confidence            99999999999999999999999999999976          2236779999999987764

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=6.3e-36  Score=360.27  Aligned_cols=277  Identities=30%  Similarity=0.396  Sum_probs=236.3

Q ss_pred             CcHHHHHHHHHcCCCccccCCCCcchhhHHhhcC---CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC-CCceEEeee
Q psy8898           2 GRKDVVEYLLASGASIHARDDGGLHPLHNACSFG---HADVVRLLLEADANPNTRDNWNFTPLHEAAAKG-KTDVCIGIY   77 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g---~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g-~~~iv~~Ll   77 (1236)
                      +++++|++|+++|+++|.++..|.||||+|+..|   +.++|++|+++|+++|..|..|.||||+|+..| +.+++++  
T Consensus        25 ~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~l--  102 (471)
T PHA03095         25 VTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKL--  102 (471)
T ss_pred             CCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHH--
Confidence            6789999999999999999999999999999999   999999999999999999999999999999999 5888887  


Q ss_pred             ccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhc--ccChHHHHHHHHhcCCCCCCCCCCCC
Q psy8898          78 FAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTV--AEDVRSLLQDAMAQYPGAPSCAETAS  155 (1236)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~--~~~~~~~v~~l~~~~~~~~~~~~~~~  155 (1236)
                                                   |+++|++++.++..|.||||+|+  ..++.++++.|++             
T Consensus       103 -----------------------------Ll~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~-------------  140 (471)
T PHA03095        103 -----------------------------LIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLR-------------  140 (471)
T ss_pred             -----------------------------HHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHH-------------
Confidence                                         99999999999999999999999  4455666666554             


Q ss_pred             CCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CCchHHHHHHhcC--cHHH
Q psy8898         156 VPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LGLVPLHNACSYG--HFEV  229 (1236)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g~T~L~~Aa~~g--~~~i  229 (1236)
                                                                         .|++++    .|.||||+|+..+  +.++
T Consensus       141 ---------------------------------------------------~gad~~~~d~~g~tpL~~a~~~~~~~~~i  169 (471)
T PHA03095        141 ---------------------------------------------------KGADVNALDLYGMTPLAVLLKSRNANVEL  169 (471)
T ss_pred             ---------------------------------------------------cCCCCCccCCCCCCHHHHHHHcCCCCHHH
Confidence                                                               333333    5889999998866  6899


Q ss_pred             HHHHHhcCCCCCCCCCCCCcHHHHHHHc--CcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHH
Q psy8898         230 TEMLIKAGANVNAMDLWQFTPLHEAASK--SRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLE  307 (1236)
Q Consensus       230 v~~Ll~~ga~~n~~d~~g~TpL~~A~~~--g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~  307 (1236)
                      +++|++.|++++..|..|+||||+|+..  ++.++++.|+++|++++.+|..|.||||+|                    
T Consensus       170 v~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~A--------------------  229 (471)
T PHA03095        170 LRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSM--------------------  229 (471)
T ss_pred             HHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHH--------------------
Confidence            9999999999998899999999998875  778899999999999999888877775443                    


Q ss_pred             HHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhh
Q psy8898         308 ACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSK  387 (1236)
Q Consensus       308 A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~  387 (1236)
                                                                                                      
T Consensus       230 --------------------------------------------------------------------------------  229 (471)
T PHA03095        230 --------------------------------------------------------------------------------  229 (471)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhcCCCCcCchhhHHHHHHhCCC--HHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCC
Q psy8898         388 KLLQEPPSVVDLESQLLEASKGGD--MTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD  465 (1236)
Q Consensus       388 ~~l~~~~~~~~~~~~L~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~  465 (1236)
                                         +..|+  ..+++.|++. +.+++..+..|  +||||+|+..|+.++|++|+++|++++   
T Consensus       230 -------------------a~~~~~~~~~v~~ll~~-g~din~~d~~g--~TpLh~A~~~~~~~~v~~LL~~gad~n---  284 (471)
T PHA03095        230 -------------------ATGSSCKRSLVLPLLIA-GISINARNRYG--QTPLHYAAVFNNPRACRRLIALGADIN---  284 (471)
T ss_pred             -------------------HhcCCchHHHHHHHHHc-CCCCCCcCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCc---
Confidence                               22232  2456666666 77888887655  599999999999999999999999995   


Q ss_pred             CCCccCCCChHHHHHhcCchHHHhhcCCCCCCCC
Q psy8898         466 NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAAN  499 (1236)
Q Consensus       466 ~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~  499 (1236)
                       .+|..|+|||++|+.+++.+++++|+..+...+
T Consensus       285 -~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~  317 (471)
T PHA03095        285 -AVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE  317 (471)
T ss_pred             -ccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence             455599999999999999999999987665443

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.1e-35  Score=354.89  Aligned_cols=284  Identities=27%  Similarity=0.393  Sum_probs=215.2

Q ss_pred             hhHHHhcCcCCcccc----CCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH-----HHHcCcHHHHHHHHh
Q psy8898         198 LALETVIMPSGQAVA----LGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHE-----AASKSRLEVCSLLLS  268 (1236)
Q Consensus       198 ~~~~~~Ll~~g~~~~----~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~-----A~~~g~~~iv~~Ll~  268 (1236)
                      ..+++++++.+...+    .+.||||.|+..|+.++|++|++.|++++..+..|.||||+     |+..++.+++++|++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~   94 (480)
T PHA03100         15 VKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLE   94 (480)
T ss_pred             HHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHH
Confidence            345666665553333    67788888888888888888888888888777777888888     888888888888888


Q ss_pred             CCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhh
Q psy8898         269 EGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLS  348 (1236)
Q Consensus       269 ~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~  348 (1236)
                      +|++++..+..|.||                                                                 
T Consensus        95 ~ga~i~~~d~~g~tp-----------------------------------------------------------------  109 (480)
T PHA03100         95 YGANVNAPDNNGITP-----------------------------------------------------------------  109 (480)
T ss_pred             CCCCCCCCCCCCCch-----------------------------------------------------------------
Confidence            887776666555444                                                                 


Q ss_pred             cChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHH--hCCCHHHHHHHHhhCCCcc
Q psy8898         349 DDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEAS--KGGDMTVVTRLLSSCPHIV  426 (1236)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~--~~g~~~~v~~Ll~~~~~~~  426 (1236)
                                                                            |+.|+  ..|+.+++++|++. +.++
T Consensus       110 ------------------------------------------------------L~~A~~~~~~~~~iv~~Ll~~-g~~~  134 (480)
T PHA03100        110 ------------------------------------------------------LLYAISKKSNSYSIVEYLLDN-GANV  134 (480)
T ss_pred             ------------------------------------------------------hhHHHhcccChHHHHHHHHHc-CCCC
Confidence                                                                  23333  45555666666655 4555


Q ss_pred             cccCCCCCCchHHHHHHhcC--CHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhH
Q psy8898         427 NCRDLDGRHSTPLHFAAGYN--RVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRE  504 (1236)
Q Consensus       427 ~~~~~~~~g~t~L~~A~~~g--~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~  504 (1236)
                      +..+..|  .||||+|+..|  +.+++++|+++|++++..+.    .                                 
T Consensus       135 ~~~~~~g--~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~----~---------------------------------  175 (480)
T PHA03100        135 NIKNSDG--ENLLHLYLESNKIDLKILKLLIDKGVDINAKNR----Y---------------------------------  175 (480)
T ss_pred             CccCCCC--CcHHHHHHHcCCChHHHHHHHHHCCCCcccccC----C---------------------------------
Confidence            5554444  37777777777  67777777777776643322    1                                 


Q ss_pred             HHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHH
Q psy8898         505 LFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA  584 (1236)
Q Consensus       505 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a  584 (1236)
                                                             |.||||+|+..|+.+++++|+++|++++..+..|.+|++. 
T Consensus       176 ---------------------------------------g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~-  215 (480)
T PHA03100        176 ---------------------------------------GYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIF-  215 (480)
T ss_pred             ---------------------------------------CCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHH-
Confidence                                                   6677777778888888888888888887766665555443 


Q ss_pred             HHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCccccccccccccc
Q psy8898         585 AAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFM  664 (1236)
Q Consensus       585 ~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  664 (1236)
                                                                                                      
T Consensus       216 --------------------------------------------------------------------------------  215 (480)
T PHA03100        216 --------------------------------------------------------------------------------  215 (480)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCCh--HHHHHHHHHcCCCCCCCCCCCc
Q psy8898         665 PRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKR--KAIVESLIRKGAHLNEKNKELL  742 (1236)
Q Consensus       665 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~--~~iv~~Ll~~gadin~~d~~G~  742 (1236)
                                                               .||||.|+..   ++  .+++++|+++|+++|.+|..|+
T Consensus       216 -----------------------------------------~t~l~~a~~~---~~~~~~iv~~Ll~~g~din~~d~~g~  251 (480)
T PHA03100        216 -----------------------------------------ETPLHIAACY---NEITLEVVNYLLSYGVPINIKDVYGF  251 (480)
T ss_pred             -----------------------------------------HhHHHHHHHh---CcCcHHHHHHHHHcCCCCCCCCCCCC
Confidence                                                     3566666665   56  9999999999999999999999


Q ss_pred             hHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q psy8898         743 APIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVS  804 (1236)
Q Consensus       743 T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~  804 (1236)
                      ||||+|+..|+.+++++|+++|+++|.+|..|.|||++|+..++.+++++|+++|++++..+
T Consensus       252 TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~i~  313 (480)
T PHA03100        252 TPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTII  313 (480)
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999887653

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4e-35  Score=353.94  Aligned_cols=286  Identities=27%  Similarity=0.332  Sum_probs=251.7

Q ss_pred             cHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH-----HHHhCCCceEEeee
Q psy8898           3 RKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHE-----AAAKGKTDVCIGIY   77 (1236)
Q Consensus         3 ~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~-----A~~~g~~~iv~~Ll   77 (1236)
                      ..++++++++.+-..+..+..|.||||.|+..|+.++|++|+++|++++..+..|.||||+     |+..|+.+++++  
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~--   91 (480)
T PHA03100         14 KVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKL--   91 (480)
T ss_pred             HHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHH--
Confidence            4578999999887788889999999999999999999999999999999999999999999     999999999988  


Q ss_pred             ccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhc--ccChHHHHHHHHhcCCCCCCCCCCCC
Q psy8898          78 FAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTV--AEDVRSLLQDAMAQYPGAPSCAETAS  155 (1236)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~--~~~~~~~v~~l~~~~~~~~~~~~~~~  155 (1236)
                                                   |+++|++++..+..|.||||+|+  ..|+.++++.|++.....        
T Consensus        92 -----------------------------Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~--------  134 (480)
T PHA03100         92 -----------------------------LLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANV--------  134 (480)
T ss_pred             -----------------------------HHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCC--------
Confidence                                         99999999999999999999999  999999998888643110        


Q ss_pred             CCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcC--cHHHHHHH
Q psy8898         156 VPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYG--HFEVTEML  233 (1236)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g--~~~iv~~L  233 (1236)
                                                                          ......|.||||+|+..|  +.+++++|
T Consensus       135 ----------------------------------------------------~~~~~~g~t~L~~A~~~~~~~~~iv~~L  162 (480)
T PHA03100        135 ----------------------------------------------------NIKNSDGENLLHLYLESNKIDLKILKLL  162 (480)
T ss_pred             ----------------------------------------------------CccCCCCCcHHHHHHHcCCChHHHHHHH
Confidence                                                                000115899999999999  99999999


Q ss_pred             HhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCC
Q psy8898         234 IKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGD  313 (1236)
Q Consensus       234 l~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~  313 (1236)
                      +++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.++++.                           
T Consensus       163 l~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~---------------------------  215 (480)
T PHA03100        163 IDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIF---------------------------  215 (480)
T ss_pred             HHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHH---------------------------
Confidence            99999999999999999999999999999999999999998887666555211                           


Q ss_pred             hHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCC
Q psy8898         314 PSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEP  393 (1236)
Q Consensus       314 ~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~  393 (1236)
                                                                                                      
T Consensus       216 --------------------------------------------------------------------------------  215 (480)
T PHA03100        216 --------------------------------------------------------------------------------  215 (480)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCcCchhhHHHHHHhCCC--HHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccC
Q psy8898         394 PSVVDLESQLLEASKGGD--MTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKW  471 (1236)
Q Consensus       394 ~~~~~~~~~L~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~  471 (1236)
                            .++|+.|+..|+  .+++++|++. |.+++..+..|  .||||+|+..|+.+++++|+++|++++    .+|..
T Consensus       216 ------~t~l~~a~~~~~~~~~iv~~Ll~~-g~din~~d~~g--~TpL~~A~~~~~~~iv~~Ll~~gad~n----~~d~~  282 (480)
T PHA03100        216 ------ETPLHIAACYNEITLEVVNYLLSY-GVPINIKDVYG--FTPLHYAVYNNNPEFVKYLLDLGANPN----LVNKY  282 (480)
T ss_pred             ------HhHHHHHHHhCcCcHHHHHHHHHc-CCCCCCCCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCC----ccCCC
Confidence                  256788888899  9999999998 78888887655  599999999999999999999999995    45569


Q ss_pred             CCChHHHHHhcCchHHHhhcCCCCCCCC
Q psy8898         472 GFTPLHEAAQKGRTQLSALLPLSPSAAN  499 (1236)
Q Consensus       472 g~t~L~~A~~~~~~~iv~~L~~~~~~~~  499 (1236)
                      |.||+++|+..++.+++++|++.+...+
T Consensus       283 g~tpl~~A~~~~~~~iv~~Ll~~g~~i~  310 (480)
T PHA03100        283 GDTPLHIAILNNNKEIFKLLLNNGPSIK  310 (480)
T ss_pred             CCcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence            9999999999999999999988776433

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.9e-34  Score=342.99  Aligned_cols=121  Identities=15%  Similarity=0.228  Sum_probs=103.4

Q ss_pred             HcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCC---CCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHH
Q psy8898         681 RQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSP---YPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVL  757 (1236)
Q Consensus       681 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~---~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv  757 (1236)
                      ..++.+++++|++.|......+..|.||||.++...   ..+..+++++|+. |+++|.+|..|+||||+|+..|+.++|
T Consensus       194 ~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~~~v  272 (494)
T PHA02989        194 DVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNYEAF  272 (494)
T ss_pred             ccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCHHHH
Confidence            356778888888888776666667888888776531   1235788887665 799999999999999999999999999


Q ss_pred             HHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q psy8898         758 DTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSI  802 (1236)
Q Consensus       758 ~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~  802 (1236)
                      ++|+++|+|+|.+|..|+||||+|+..|+.++++.|+++++..+.
T Consensus       273 ~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~~~~  317 (494)
T PHA02989        273 NYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPGKYL  317 (494)
T ss_pred             HHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCChHH
Confidence            999999999999999999999999999999999999999865553

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.6e-34  Score=311.45  Aligned_cols=182  Identities=19%  Similarity=0.177  Sum_probs=157.3

Q ss_pred             CCcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898           1 YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      ||+.+++++|+++|++  .+|.+|+||||+||.+|+.++|++|+++|++++..+  |.||||+|+..|+.+++++     
T Consensus         9 ~~~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~l-----   79 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKI-----   79 (284)
T ss_pred             cCHHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHH-----
Confidence            6889999999999884  579999999999999999999999999999998875  7899999999999999988     


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPS  160 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~  160 (1236)
                                                |+++|++++.+|..|+||||+|+..|+.++++.|++..                
T Consensus        80 --------------------------LL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~g----------------  117 (284)
T PHA02791         80 --------------------------LLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN----------------  117 (284)
T ss_pred             --------------------------HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC----------------
Confidence                                      99999999999999999999999999998888877642                


Q ss_pred             cccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CC-chHHHHHHhcCcHHHHHHHHh
Q psy8898         161 QYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LG-LVPLHNACSYGHFEVTEMLIK  235 (1236)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g-~T~L~~Aa~~g~~~iv~~Ll~  235 (1236)
                                                                      ++++    .| .||||+|+..|+.++|++|++
T Consensus       118 ------------------------------------------------adin~~~~~g~~TpL~~Aa~~g~~eivk~LL~  149 (284)
T PHA02791        118 ------------------------------------------------WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLS  149 (284)
T ss_pred             ------------------------------------------------CCcCccCCCCCcHHHHHHHHcCCHHHHHHHHh
Confidence                                                            2221    24 489999999999999999999


Q ss_pred             cCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCc
Q psy8898         236 AGANVNAMD-LWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSA  283 (1236)
Q Consensus       236 ~ga~~n~~d-~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~  283 (1236)
                      +|.+.  .| ..|.||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus       150 ~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~  196 (284)
T PHA02791        150 EIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIP  196 (284)
T ss_pred             cCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCCh
Confidence            87543  23 357899999999999999999999999988877655554

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.4e-34  Score=344.84  Aligned_cols=277  Identities=22%  Similarity=0.282  Sum_probs=222.2

Q ss_pred             CcHHHHHHHHHcCCCccccCCCCcchhhHHhhc--CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCC------CceE
Q psy8898           2 GRKDVVEYLLASGASIHARDDGGLHPLHNACSF--GHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGK------TDVC   73 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~--g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~------~~iv   73 (1236)
                      .+.++|++|+++|+|+|.+ .+|.||||.++..  ++.++|++|+++|||+|..+ .+.||||.|+.+++      .+++
T Consensus        14 ~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv   91 (494)
T PHA02989         14 VDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKIV   91 (494)
T ss_pred             CcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHHH
Confidence            5789999999999999998 6799998765543  47999999999999999887 57999999988764      3455


Q ss_pred             EeeeccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhccc---ChHHHHHHHHhcCCCCCCC
Q psy8898          74 IGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAE---DVRSLLQDAMAQYPGAPSC  150 (1236)
Q Consensus        74 ~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~---~~~~~v~~l~~~~~~~~~~  150 (1236)
                      ++                               |+++|||++.++..|.||||.|+..   ++.+++             
T Consensus        92 ~~-------------------------------Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv-------------  127 (494)
T PHA02989         92 KL-------------------------------LLKFGADINLKTFNGVSPIVCFIYNSNINNCDML-------------  127 (494)
T ss_pred             HH-------------------------------HHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHH-------------
Confidence            44                               9999999999999999999988754   344444             


Q ss_pred             CCCCCCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccc-c----CCchHHHHHHhc-
Q psy8898         151 AETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAV-A----LGLVPLHNACSY-  224 (1236)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~-~----~g~T~L~~Aa~~-  224 (1236)
                                                                         ++|+++|+++ +    .|+||||+|+.. 
T Consensus       128 ---------------------------------------------------~~Ll~~Gadin~~~d~~g~tpLh~a~~~~  156 (494)
T PHA02989        128 ---------------------------------------------------RFLLSKGINVNDVKNSRGYNLLHMYLESF  156 (494)
T ss_pred             ---------------------------------------------------HHHHHCCCCcccccCCCCCCHHHHHHHhc
Confidence                                                               4455556666 2    688999998764 


Q ss_pred             -CcHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHcC----cHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhh
Q psy8898         225 -GHFEVTEMLIKAGANVNA-MDLWQFTPLHEAASKS----RLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSN  298 (1236)
Q Consensus       225 -g~~~iv~~Ll~~ga~~n~-~d~~g~TpL~~A~~~g----~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~  298 (1236)
                       ++.++|++|+++|++++. .+..|.||||.|+..+    +.+++++|+++|++++..+..+.|+++.+           
T Consensus       157 ~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~-----------  225 (494)
T PHA02989        157 SVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESF-----------  225 (494)
T ss_pred             cCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHH-----------
Confidence             688999999999999988 6788999999987764    88999999999999988887666664432           


Q ss_pred             ccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccH
Q psy8898         299 EFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTA  378 (1236)
Q Consensus       299 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~  378 (1236)
                                +..+                                                                  
T Consensus       226 ----------~~~~------------------------------------------------------------------  229 (494)
T PHA02989        226 ----------LDNN------------------------------------------------------------------  229 (494)
T ss_pred             ----------HHhc------------------------------------------------------------------
Confidence                      1100                                                                  


Q ss_pred             HHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcC
Q psy8898         379 LQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHG  458 (1236)
Q Consensus       379 l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g  458 (1236)
                                                .+...+..+++++|+.  +.+++.++..|  +||||+|+..|+.++|++|+++|
T Consensus       230 --------------------------~~~~~~~~~il~~l~~--~advn~~d~~G--~TpL~~Aa~~~~~~~v~~LL~~G  279 (494)
T PHA02989        230 --------------------------KILSKKEFKVLNFILK--YIKINKKDKKG--FNPLLISAKVDNYEAFNYLLKLG  279 (494)
T ss_pred             --------------------------hhhcccchHHHHHHHh--CCCCCCCCCCC--CCHHHHHHHhcCHHHHHHHHHcC
Confidence                                      1122345677776665  47788877665  59999999999999999999999


Q ss_pred             CCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCC
Q psy8898         459 ADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPS  496 (1236)
Q Consensus       459 a~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~  496 (1236)
                      ++++.    +|..|+||||+|+..++.+++++|++...
T Consensus       280 adin~----~d~~G~TpL~~A~~~~~~~iv~~LL~~~p  313 (494)
T PHA02989        280 DDIYN----VSKDGDTVLTYAIKHGNIDMLNRILQLKP  313 (494)
T ss_pred             CCccc----cCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            99954    55599999999999999999999987653

>KOG0508|consensus

Probab=100.00  E-value=7.9e-34  Score=298.50  Aligned_cols=199  Identities=31%  Similarity=0.458  Sum_probs=166.5

Q ss_pred             ccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChh
Q psy8898         118 NQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQP  197 (1236)
Q Consensus       118 ~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (1236)
                      ..+|.|||..|+++|+.++|++++++....+....+..+                         +|.             
T Consensus        39 ~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~F-------------------------Dge-------------   80 (615)
T KOG0508|consen   39 VQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRF-------------------------DGE-------------   80 (615)
T ss_pred             ccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEe-------------------------CCc-------------
Confidence            456889999999999999999999976443332222111                         000             


Q ss_pred             hhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC
Q psy8898         198 LALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHN  277 (1236)
Q Consensus       198 ~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~  277 (1236)
                                   ...|-+||-.|+..||+++|+.|+++|++||......-|||..||..|+.++|++|+++|+|+++.|
T Consensus        81 -------------~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~Ian  147 (615)
T KOG0508|consen   81 -------------TIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIAN  147 (615)
T ss_pred             -------------ccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccc
Confidence                         1147789999999999999999999999999998888899999999999999999999999999999


Q ss_pred             CCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHH
Q psy8898         278 CHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVA  357 (1236)
Q Consensus       278 ~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~  357 (1236)
                      ..|.|.||+|                                                                      
T Consensus       148 rhGhTcLmIa----------------------------------------------------------------------  157 (615)
T KOG0508|consen  148 RHGHTCLMIA----------------------------------------------------------------------  157 (615)
T ss_pred             cCCCeeEEee----------------------------------------------------------------------
Confidence            9999887664                                                                      


Q ss_pred             HHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCch
Q psy8898         358 EEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHST  437 (1236)
Q Consensus       358 ~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t  437 (1236)
                                                                       +..|+.+++++|++. +.++|.++..|.  |
T Consensus       158 -------------------------------------------------~ykGh~~I~qyLle~-gADvn~ks~kGN--T  185 (615)
T KOG0508|consen  158 -------------------------------------------------CYKGHVDIAQYLLEQ-GADVNAKSYKGN--T  185 (615)
T ss_pred             -------------------------------------------------eccCchHHHHHHHHh-CCCcchhcccCc--h
Confidence                                                             456788888888888 888888877664  9


Q ss_pred             HHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCC
Q psy8898         438 PLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLS  494 (1236)
Q Consensus       438 ~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~  494 (1236)
                      +||.|++.|+++++++|+.+|+.++     +|..|.|||..|+..|+.++|++|+..
T Consensus       186 ALH~caEsG~vdivq~Ll~~ga~i~-----~d~~GmtPL~~Aa~tG~~~iVe~L~~~  237 (615)
T KOG0508|consen  186 ALHDCAESGSVDIVQLLLKHGAKID-----VDGHGMTPLLLAAVTGHTDIVERLLQC  237 (615)
T ss_pred             HHHhhhhcccHHHHHHHHhCCceee-----ecCCCCchHHHHhhhcchHHHHHHhcC
Confidence            9999999999999999999998873     455799999999999999999999853

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.8e-33  Score=320.66  Aligned_cols=193  Identities=11%  Similarity=0.041  Sum_probs=148.4

Q ss_pred             HHHHHHcCCCccccCCCCcchhhHHhhcCCH-HHHHHHHHCCCCCCCCCCCCCCHHHH-HHHhCCCceEEeeeccccCcc
Q psy8898           7 VEYLLASGASIHARDDGGLHPLHNACSFGHA-DVVRLLLEADANPNTRDNWNFTPLHE-AAAKGKTDVCIGIYFAEHSSK   84 (1236)
Q Consensus         7 v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~-~iv~~Ll~~ga~~n~~d~~g~t~L~~-A~~~g~~~iv~~Ll~~~~~~~   84 (1236)
                      .+.|++.|+++-. ..+|.||||.=..+.|. .-+++++.-|..++..+-+|.+++|+ |+.+|++++|++         
T Consensus        21 ~~~l~~~g~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~---------   90 (631)
T PHA02792         21 AQSLIESGANPLY-EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKL---------   90 (631)
T ss_pred             HHHHHHcCCCccc-ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHH---------
Confidence            5789999999877 57888999988777763 45667777777888888889999977 556788999988         


Q ss_pred             ccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcc-cChHHHHHHHHhcCCCCCCCCCCCCCCCCCccc
Q psy8898          85 SNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVA-EDVRSLLQDAMAQYPGAPSCAETASVPPPSQYS  163 (1236)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~-~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~  163 (1236)
                                            |+++|||++.++..|.||+++|+. +++.++++.|++++...  +....         
T Consensus        91 ----------------------LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~--~~~~~---------  137 (631)
T PHA02792         91 ----------------------LISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPT--CSNIQ---------  137 (631)
T ss_pred             ----------------------HHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCc--ccccc---------
Confidence                                  999999999999889999999966 69999999999875321  11000         


Q ss_pred             ccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHH---hcCc-------CC----ccccCCchHHHHHHhcC----
Q psy8898         164 NTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALET---VIMP-------SG----QAVALGLVPLHNACSYG----  225 (1236)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~Ll~-------~g----~~~~~g~T~L~~Aa~~g----  225 (1236)
                                        .|.         +|+...+.+   +-.+       .+    .+...|.||||+|+.++    
T Consensus       138 ------------------~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~  190 (631)
T PHA02792        138 ------------------YGY---------KIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDG  190 (631)
T ss_pred             ------------------cCc---------chhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCccc
Confidence                              001         111111100   0000       11    22336999999999999    


Q ss_pred             ---cHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHhC
Q psy8898         226 ---HFEVTEMLIKAGANVNAMDLWQFTPLHEAASKS--RLEVCSLLLSE  269 (1236)
Q Consensus       226 ---~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g--~~~iv~~Ll~~  269 (1236)
                         +.++++.|+++|++++..|..|.||||+|+.+.  +.|++++|++.
T Consensus       191 ~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~  239 (631)
T PHA02792        191 YATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDS  239 (631)
T ss_pred             ccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhc
Confidence               899999999999999999999999999999999  88999999984

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.1e-33  Score=335.95  Aligned_cols=300  Identities=25%  Similarity=0.310  Sum_probs=219.6

Q ss_pred             ccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCC
Q psy8898          17 IHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGT   96 (1236)
Q Consensus        17 ~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~   96 (1236)
                      .+..+..+.||||.||..|+.++|++|+++|+++|..|..|+||||+|+..|+.++++.                     
T Consensus        30 ~~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~---------------------   88 (477)
T PHA02878         30 STSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKE---------------------   88 (477)
T ss_pred             cCcccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHH---------------------
Confidence            34455678999999999999999999999999999999999999999999999999987                     


Q ss_pred             CCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCC
Q psy8898          97 GCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPP  176 (1236)
Q Consensus        97 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (1236)
                                |++.+.+.+.  ..+.+|++.|+..++.++++.++...........                        
T Consensus        89 ----------Ll~~~~~~~~--~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~------------------------  132 (477)
T PHA02878         89 ----------MIRSINKCSV--FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTID------------------------  132 (477)
T ss_pred             ----------HHHHHhcccc--ccchhhHHHHHHcCCHHHHHHHHhCcccCcccCc------------------------
Confidence                      8888766554  5678999999999999999999865211000000                        


Q ss_pred             CccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHh--cCcHHHHHHHHhcCCCCCCCCCC-CCcHHHH
Q psy8898         177 AQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACS--YGHFEVTEMLIKAGANVNAMDLW-QFTPLHE  253 (1236)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~--~g~~~iv~~Ll~~ga~~n~~d~~-g~TpL~~  253 (1236)
                                                            ...+..+..  ..+.+++++|+++|+++|..+.. |+||||+
T Consensus       133 --------------------------------------~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~  174 (477)
T PHA02878        133 --------------------------------------LVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHY  174 (477)
T ss_pred             --------------------------------------HHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHH
Confidence                                                  000111111  12345888888888888888887 8888888


Q ss_pred             HHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCC
Q psy8898         254 AASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT  333 (1236)
Q Consensus       254 A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~  333 (1236)
                      |+..|+.+++++|+++|++++.+|..|.||                                                  
T Consensus       175 A~~~~~~~iv~~Ll~~gad~n~~d~~g~tp--------------------------------------------------  204 (477)
T PHA02878        175 ATENKDQRLTELLLSYGANVNIPDKTNNSP--------------------------------------------------  204 (477)
T ss_pred             HHhCCCHHHHHHHHHCCCCCCCcCCCCCCH--------------------------------------------------
Confidence            888888888888888888887776655554                                                  


Q ss_pred             CCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHH
Q psy8898         334 GDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMT  413 (1236)
Q Consensus       334 ~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~  413 (1236)
                                                                                           ||.|+..|+.+
T Consensus       205 ---------------------------------------------------------------------Lh~A~~~~~~~  215 (477)
T PHA02878        205 ---------------------------------------------------------------------LHHAVKHYNKP  215 (477)
T ss_pred             ---------------------------------------------------------------------HHHHHHhCCHH
Confidence                                                                                 33444556666


Q ss_pred             HHHHHHhhCCCcccccCCCCCCchHHHHHHhc-CCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcC
Q psy8898         414 VVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGY-NRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLP  492 (1236)
Q Consensus       414 ~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~-g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~  492 (1236)
                      +++.|++. +.+++..+..|  +||||+|+.. ++.+++++|+++|++++..+..   .                     
T Consensus       216 iv~~Ll~~-ga~in~~d~~g--~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~---~---------------------  268 (477)
T PHA02878        216 IVHILLEN-GASTDARDKCG--NTPLHISVGYCKDYDILKLLLEHGVDVNAKSYI---L---------------------  268 (477)
T ss_pred             HHHHHHHc-CCCCCCCCCCC--CCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCC---C---------------------
Confidence            66666665 56666666554  4888888865 6788888888888888544320   1                     


Q ss_pred             CCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCcc
Q psy8898         493 LSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNV  572 (1236)
Q Consensus       493 ~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~  572 (1236)
                                                                         |.||||+|  .++.+++++|+++|+++|.
T Consensus       269 ---------------------------------------------------g~TpLh~A--~~~~~~v~~Ll~~gadin~  295 (477)
T PHA02878        269 ---------------------------------------------------GLTALHSS--IKSERKLKLLLEYGADINS  295 (477)
T ss_pred             ---------------------------------------------------CCCHHHHH--ccCHHHHHHHHHCCCCCCC
Confidence                                                               55667777  3567888888888999988


Q ss_pred             CCCCCCCHHHHHHH--------HHHHh-----cCCCCcccCCCCCChhhhh
Q psy8898         573 ADLWKFTPLHEAAA--------KALLQ-----HGADINLKNTDGKTALDLA  610 (1236)
Q Consensus       573 ~d~~g~tpL~~a~~--------~~Ll~-----~g~d~~~~~~~g~t~L~~a  610 (1236)
                      .|..|.||||+|+.        +.|+.     .+.+++.++..|.++-..+
T Consensus       296 ~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~~~n~~~  346 (477)
T PHA02878        296 LNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFIDNMDC  346 (477)
T ss_pred             cCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHHHHHHHH
Confidence            88889999988863        23443     3456667777776654443

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4e-33  Score=333.53  Aligned_cols=274  Identities=24%  Similarity=0.297  Sum_probs=221.8

Q ss_pred             CchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCC--CCCchhHHHHHHhcC
Q psy8898         435 HSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSA--ANDPLRELFEACKGG  512 (1236)
Q Consensus       435 g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~--~~~~~~~L~~A~~~g  512 (1236)
                      +.||||+|+..|+.++|++|+++|++++    .+|..|+||||+|+..|+.+++++|+.....  ...+.++++.|+..+
T Consensus        37 ~~tPLh~A~~~g~~e~vk~Ll~~gadvn----~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~  112 (477)
T PHA02878         37 PFIPLHQAVEARNLDVVKSLLTRGHNVN----QPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNR  112 (477)
T ss_pred             CcchHHHHHHcCCHHHHHHHHHCCCCCC----CCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcC
Confidence            4599999999999999999999999995    4556999999999999999999999865432  245677888899999


Q ss_pred             ChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhc--CcHHHHHHHHhCCCCCccCCCC-CCCHHHHHH----
Q psy8898         513 DLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSY--GHYEVTEMLVKHGANVNVADLW-KFTPLHEAA----  585 (1236)
Q Consensus       513 ~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~--g~~~iv~~Ll~~g~~v~~~d~~-g~tpL~~a~----  585 (1236)
                      +.++++.|+...........            ...+......  ...+++++|+++|++++..+.. |.||||+|+    
T Consensus       113 ~~ei~~~Ll~~~~~~~~~~~------------~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~  180 (477)
T PHA02878        113 NVEIFKIILTNRYKNIQTID------------LVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKD  180 (477)
T ss_pred             CHHHHHHHHhCcccCcccCc------------HHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCC
Confidence            99999988865321111110            0011111112  2346889999999998888888 888888887    


Q ss_pred             ---HHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCccccccccccc
Q psy8898         586 ---AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELM  662 (1236)
Q Consensus       586 ---~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  662 (1236)
                         +++|++.|++++..|..|.||||.|                                                    
T Consensus       181 ~~iv~~Ll~~gad~n~~d~~g~tpLh~A----------------------------------------------------  208 (477)
T PHA02878        181 QRLTELLLSYGANVNIPDKTNNSPLHHA----------------------------------------------------  208 (477)
T ss_pred             HHHHHHHHHCCCCCCCcCCCCCCHHHHH----------------------------------------------------
Confidence               5688888888888887777776655                                                    


Q ss_pred             ccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCC-CC
Q psy8898         663 FMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNK-EL  741 (1236)
Q Consensus       663 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~-~G  741 (1236)
                                       +..|+.+++++|++.+......+..|+||||+|+..  .++.+++++|+++|+++|.++. .|
T Consensus       209 -----------------~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~--~~~~~iv~~Ll~~gadvn~~~~~~g  269 (477)
T PHA02878        209 -----------------VKHYNKPIVHILLENGASTDARDKCGNTPLHISVGY--CKDYDILKLLLEHGVDVNAKSYILG  269 (477)
T ss_pred             -----------------HHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh--cCCHHHHHHHHHcCCCCCccCCCCC
Confidence                             667899999999999988888888899999999973  2579999999999999999986 79


Q ss_pred             chHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcC-CHHHHHHHHhCC
Q psy8898         742 LAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDD-KTQAVRVLLSHN  797 (1236)
Q Consensus       742 ~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~-~~~iv~~Ll~~g  797 (1236)
                      +||||+|  .++.+++++|+++|+|+|.+|..|.||||+|+..+ ..+++++|+.+.
T Consensus       270 ~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~  324 (477)
T PHA02878        270 LTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNI  324 (477)
T ss_pred             CCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHH
Confidence            9999999  57899999999999999999999999999999864 567888887654

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=8.5e-33  Score=298.04  Aligned_cols=118  Identities=19%  Similarity=0.253  Sum_probs=101.3

Q ss_pred             HHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchH-HHHHHHhCC
Q psy8898         675 CLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAP-IHLAADLGH  753 (1236)
Q Consensus       675 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~-Lh~A~~~g~  753 (1236)
                      |||.|+..|+.+++++|++++.... ....|.||||+|+..   |+.+++++|+++|+++|.+|..|.|| ||+|+..|+
T Consensus       131 pL~~Aa~~g~~eivk~LL~~~~~~~-d~~~g~TpLh~Aa~~---g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~  206 (284)
T PHA02791        131 SFYHAVMLNDVSIVSYFLSEIPSTF-DLAILLSCIHITIKN---GHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKD  206 (284)
T ss_pred             HHHHHHHcCCHHHHHHHHhcCCccc-ccccCccHHHHHHHc---CCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCC
Confidence            4455577899999999998864332 112489999999997   89999999999999999999999987 999999999


Q ss_pred             HHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q psy8898         754 LDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIV  803 (1236)
Q Consensus       754 ~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  803 (1236)
                      .++|++|+++|+++|.+|..| |||      ++.|++++||++-++....
T Consensus       207 ~e~v~lLl~~Ga~in~~~~~~-~~l------~~~e~~~~ll~~~~~~~~~  249 (284)
T PHA02791        207 LEMLQALFKYDINIYSVNLEN-VLL------DDAEIAKMIIEKHVEYKSD  249 (284)
T ss_pred             HHHHHHHHHCCCCCccCcccC-ccC------CCHHHHHHHHHhhhhhccc
Confidence            999999999999999999854 666      8999999999998776544

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.8e-31  Score=319.54  Aligned_cols=295  Identities=18%  Similarity=0.268  Sum_probs=218.6

Q ss_pred             ChhhhHHHhcCcCCcccc--CCchHHHHHHh--cCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc-----CcHHHHHH
Q psy8898         195 PQPLALETVIMPSGQAVA--LGLVPLHNACS--YGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASK-----SRLEVCSL  265 (1236)
Q Consensus       195 ~l~~~~~~~Ll~~g~~~~--~g~T~L~~Aa~--~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~-----g~~~iv~~  265 (1236)
                      ......++.|++.+....  .|.|+++.+..  .++.++|++|+++|+++|..|..|.||||.|+.+     ++.+++++
T Consensus        15 ~~~~~~v~~ll~~~~~~~~~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~   94 (489)
T PHA02798         15 NVKLSTVKLLIKSCNPNEIVNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKI   94 (489)
T ss_pred             cccHHHHHHHHhcCChhhhcccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHH
Confidence            345667888887654443  67787764443  4478899999999999998899999999988764     66889999


Q ss_pred             HHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHH
Q psy8898         266 LLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLID  345 (1236)
Q Consensus       266 Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~  345 (1236)
                      |+++|+|++.+|..|+||||.|                     +..+                                 
T Consensus        95 Ll~~GadiN~~d~~G~TpLh~a---------------------~~~~---------------------------------  120 (489)
T PHA02798         95 LIENGADINKKNSDGETPLYCL---------------------LSNG---------------------------------  120 (489)
T ss_pred             HHHCCCCCCCCCCCcCcHHHHH---------------------HHcC---------------------------------
Confidence            9999999888887777764432                     1111                                 


Q ss_pred             HhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCc
Q psy8898         346 LLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHI  425 (1236)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~  425 (1236)
                                                                                    ..++.+++++|++. |++
T Consensus       121 --------------------------------------------------------------~~~~~~iv~~Ll~~-Gad  137 (489)
T PHA02798        121 --------------------------------------------------------------YINNLEILLFMIEN-GAD  137 (489)
T ss_pred             --------------------------------------------------------------CcChHHHHHHHHHc-CCC
Confidence                                                                          01356777788777 677


Q ss_pred             ccccCCCCCCchHHHHHHhcCC---HHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCch
Q psy8898         426 VNCRDLDGRHSTPLHFAAGYNR---VAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPL  502 (1236)
Q Consensus       426 ~~~~~~~~~g~t~L~~A~~~g~---~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~  502 (1236)
                      ++..+.+|  +||||+|+..++   .+++++|+++|++++..++   ..|.||||.++..                    
T Consensus       138 vn~~d~~g--~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~---~~~~t~Lh~~~~~--------------------  192 (489)
T PHA02798        138 TTLLDKDG--FTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNN---KEKYDTLHCYFKY--------------------  192 (489)
T ss_pred             ccccCCCC--CcHHHHHHHcCCcchHHHHHHHHHhCCCcccccC---cCCCcHHHHHHHh--------------------
Confidence            77777665  488888888877   8888888888888854432   2455555544321                    


Q ss_pred             hHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHH
Q psy8898         503 RELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH  582 (1236)
Q Consensus       503 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~  582 (1236)
                                                                      ++..++.+++++|+++|++++..+..|.|+++
T Consensus       193 ------------------------------------------------~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~  224 (489)
T PHA02798        193 ------------------------------------------------NIDRIDADILKLFVDNGFIINKENKSHKKKFM  224 (489)
T ss_pred             ------------------------------------------------ccccCCHHHHHHHHHCCCCcccCCccccchHH
Confidence                                                            12345789999999999888776665555544


Q ss_pred             HHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCccccccccccc
Q psy8898         583 EAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELM  662 (1236)
Q Consensus       583 ~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  662 (1236)
                      .....                                                                           
T Consensus       225 ~~l~~---------------------------------------------------------------------------  229 (489)
T PHA02798        225 EYLNS---------------------------------------------------------------------------  229 (489)
T ss_pred             HHHHH---------------------------------------------------------------------------
Confidence            21100                                                                           


Q ss_pred             ccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCc
Q psy8898         663 FMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELL  742 (1236)
Q Consensus       663 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~  742 (1236)
                                                                    +.++...   ++.+++++|+. ++|+|.+|..|+
T Consensus       230 ----------------------------------------------l~~~~~~---~~~~i~~~l~~-~~dvN~~d~~G~  259 (489)
T PHA02798        230 ----------------------------------------------LLYDNKR---FKKNILDFIFS-YIDINQVDELGF  259 (489)
T ss_pred             ----------------------------------------------HHhhccc---chHHHHHHHHh-cCCCCCcCcCCc
Confidence                                                          0011111   45778887765 699999999999


Q ss_pred             hHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q psy8898         743 APIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVS  804 (1236)
Q Consensus       743 T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~  804 (1236)
                      ||||+|+..|+.+++++|+++|||+|.+|..|+|||++|+++++.++++.|++++++++..+
T Consensus       260 TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i~  321 (489)
T PHA02798        260 NPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNTIS  321 (489)
T ss_pred             cHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999888653

>KOG4412|consensus

Probab=100.00  E-value=3.7e-33  Score=256.52  Aligned_cols=190  Identities=36%  Similarity=0.547  Sum_probs=167.3

Q ss_pred             HHHHHHcCC-CccccCC-CCcchhhHHhhcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCc
Q psy8898           7 VEYLLASGA-SIHARDD-GGLHPLHNACSFGHADVVRLLLE-ADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSS   83 (1236)
Q Consensus         7 v~~Ll~~ga-~~n~~d~-~g~t~L~~A~~~g~~~iv~~Ll~-~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~   83 (1236)
                      |+-|+++.- ++|.++. +||||||.||..|+.+||++|++ -+..+|..|..|+||||.|+..|+.++|+.        
T Consensus        19 veel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~--------   90 (226)
T KOG4412|consen   19 VEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKE--------   90 (226)
T ss_pred             HHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHH--------
Confidence            445555543 6777777 99999999999999999999995 567789999999999999999999999987        


Q ss_pred             cccccccccCCCCCCCCCcchhHHHhc-CCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcc
Q psy8898          84 KSNQYVYGIGGGTGCPMHKDRSCYLAH-GADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQY  162 (1236)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~  162 (1236)
                                             |+.+ |+|+|..+..|.|+||||+.+|..++.+.|+++....               
T Consensus        91 -----------------------Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i---------------  132 (226)
T KOG4412|consen   91 -----------------------LLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALI---------------  132 (226)
T ss_pred             -----------------------HhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCC---------------
Confidence                                   7877 9999999999999999999999999999888764211               


Q ss_pred             cccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCC
Q psy8898         163 SNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNA  242 (1236)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~  242 (1236)
                                                                   .+.+..|.||||.|+.-|+++++++|+.+|+.+|.
T Consensus       133 ---------------------------------------------~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~  167 (226)
T KOG4412|consen  133 ---------------------------------------------RIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNT  167 (226)
T ss_pred             ---------------------------------------------cccccccCchhHHHHhccchhhHHHHHhcCCCCCc
Confidence                                                         11122589999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q psy8898         243 MDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAP  288 (1236)
Q Consensus       243 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~  288 (1236)
                      +|+.|+||||+|...|+.++..+|+++||+++..|+.| ||+.++.
T Consensus       168 qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~  212 (226)
T KOG4412|consen  168 QDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIAC  212 (226)
T ss_pred             ccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHH
Confidence            99999999999999999999999999999999999988 8876653

>KOG4412|consensus

Probab=99.98  E-value=3.1e-32  Score=250.50  Aligned_cols=207  Identities=35%  Similarity=0.481  Sum_probs=149.3

Q ss_pred             HHHHHHhCCCHHHHHHHHhhCCCcccccCC-CCCCchHHHHHHhcCCHHHHHHHHhc-CCCCCCCCCCCccCCCChHHHH
Q psy8898         402 QLLEASKGGDMTVVTRLLSSCPHIVNCRDL-DGRHSTPLHFAAGYNRVAVVEYLLAH-GADVHSKDNATDKWGFTPLHEA  479 (1236)
Q Consensus       402 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~d~~g~t~L~~A  479 (1236)
                      +.+.++......-++.+++..+...+.++. +++  ||||+||..|+.++|++|++. +..+|.++.             
T Consensus         6 ~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~R--t~LHwa~S~g~~eiv~fLlsq~nv~~ddkDd-------------   70 (226)
T KOG4412|consen    6 LGKAICENCEEFKVEELIQSDPKSLNARDDQDGR--TPLHWACSFGHVEIVYFLLSQPNVKPDDKDD-------------   70 (226)
T ss_pred             hHHHHHhhchHHHHHHHHhcChhhhhccccccCC--ceeeeeeecCchhHHHHHHhcCCCCCCCccc-------------
Confidence            455566666777788888877766676655 554  999999999999999999963 444433222             


Q ss_pred             HhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHH
Q psy8898         480 AQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEV  559 (1236)
Q Consensus       480 ~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~i  559 (1236)
                                                                                     .||||||.||..|+.++
T Consensus        71 ---------------------------------------------------------------aGWtPlhia~s~g~~ev   87 (226)
T KOG4412|consen   71 ---------------------------------------------------------------AGWTPLHIAASNGNDEV   87 (226)
T ss_pred             ---------------------------------------------------------------cCCchhhhhhhcCcHHH
Confidence                                                                           27777777777777777


Q ss_pred             HHHHHhC-CCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCc
Q psy8898         560 TEMLVKH-GANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGL  638 (1236)
Q Consensus       560 v~~Ll~~-g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~  638 (1236)
                      |+.|+.+ |+++|..+                          +.|+|+||+|                            
T Consensus        88 Vk~Ll~r~~advna~t--------------------------n~G~T~LHyA----------------------------  113 (226)
T KOG4412|consen   88 VKELLNRSGADVNATT--------------------------NGGQTCLHYA----------------------------  113 (226)
T ss_pred             HHHHhcCCCCCcceec--------------------------CCCcceehhh----------------------------
Confidence            7777766 55554433                          3333333333                            


Q ss_pred             ccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCC
Q psy8898         639 HRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYP  718 (1236)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~  718 (1236)
                                                               +..|..+++++|++++.....++..|.||||.|+..   
T Consensus       114 -----------------------------------------agK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAav---  149 (226)
T KOG4412|consen  114 -----------------------------------------AGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAV---  149 (226)
T ss_pred             -----------------------------------------hcCChhhHHHHHHhcCCCCcccccccCchhHHHHhc---
Confidence                                                     344555666666666655555555577777777766   


Q ss_pred             ChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcC
Q psy8898         719 KRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDD  785 (1236)
Q Consensus       719 ~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~  785 (1236)
                      |+++++++|+..|+.+|.+|+.|+||||.|...|+.++..+|+++||+++..|++| ||+..|+-.-
T Consensus       150 Gklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~~l  215 (226)
T KOG4412|consen  150 GKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACNEL  215 (226)
T ss_pred             cchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHHHH
Confidence            78999999999999999999999999999988889999999999999999999988 9987775433

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.98  E-value=4.9e-31  Score=310.91  Aligned_cols=253  Identities=26%  Similarity=0.354  Sum_probs=191.6

Q ss_pred             CchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHH
Q psy8898         214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQ  293 (1236)
Q Consensus       214 g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~  293 (1236)
                      .+++||.|+..|+.+++++|++.|+++|..+.+|.||||+|+..|+.+++++|+++|++++..+.++.|           
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t-----------   70 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIES-----------   70 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCccc-----------
Confidence            568999999999999999999999999999999999999999999999999999999988765433333           


Q ss_pred             HHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCC
Q psy8898         294 QRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQS  373 (1236)
Q Consensus       294 ~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (1236)
                                                                                                      
T Consensus        71 --------------------------------------------------------------------------------   70 (413)
T PHA02875         71 --------------------------------------------------------------------------------   70 (413)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHH
Q psy8898         374 GGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEY  453 (1236)
Q Consensus       374 ~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~  453 (1236)
                                                  +||.|+..|+.+++++|++.+....+..+.+  |+||||+|+..|+.+++++
T Consensus        71 ----------------------------~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--g~tpL~~A~~~~~~~iv~~  120 (413)
T PHA02875         71 ----------------------------ELHDAVEEGDVKAVEELLDLGKFADDVFYKD--GMTPLHLATILKKLDIMKL  120 (413)
T ss_pred             ----------------------------HHHHHHHCCCHHHHHHHHHcCCcccccccCC--CCCHHHHHHHhCCHHHHHH
Confidence                                        3445555666666666666533322333333  3478888888888888888


Q ss_pred             HHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccC
Q psy8898         454 LLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAG  533 (1236)
Q Consensus       454 Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~  533 (1236)
                      |+++|++++..+.    .                                                              
T Consensus       121 Ll~~gad~~~~~~----~--------------------------------------------------------------  134 (413)
T PHA02875        121 LIARGADPDIPNT----D--------------------------------------------------------------  134 (413)
T ss_pred             HHhCCCCCCCCCC----C--------------------------------------------------------------
Confidence            8887777744322    2                                                              


Q ss_pred             CCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhccc
Q psy8898         534 RKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPC  613 (1236)
Q Consensus       534 ~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~  613 (1236)
                                |.||||+|+..|+.+++++|+++|++++.+|.                                      
T Consensus       135 ----------g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~--------------------------------------  166 (413)
T PHA02875        135 ----------KFSPLHLAVMMGDIKGIELLIDHKACLDIEDC--------------------------------------  166 (413)
T ss_pred             ----------CCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCC--------------------------------------
Confidence                      55566666667777777777777766544432                                      


Q ss_pred             CcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhc
Q psy8898         614 TRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLT  693 (1236)
Q Consensus       614 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~  693 (1236)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (413)
T PHA02875        167 --------------------------------------------------------------------------------  166 (413)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCC-chHHHHHHHhCCHHHHHHHHHCCCCcccc--
Q psy8898         694 SDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKEL-LAPIHLAADLGHLDVLDTLLRLGAKVNLV--  770 (1236)
Q Consensus       694 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G-~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~--  770 (1236)
                                .|+||||+|+..   |+.+++++|+++|++++..+..| .||+|+|+..|+.++|++|+++|+|+|..  
T Consensus       167 ----------~g~TpL~~A~~~---g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~  233 (413)
T PHA02875        167 ----------CGCTPLIIAMAK---GDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFM  233 (413)
T ss_pred             ----------CCCCHHHHHHHc---CCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhh
Confidence                      255566666654   78999999999999999998887 48999999999999999999999999875  


Q ss_pred             -CCCCCcHHHHHHHc---CCHHHHHHHH
Q psy8898         771 -DVLGQTALHRTARD---DKTQAVRVLL  794 (1236)
Q Consensus       771 -d~~G~tpL~~A~~~---~~~~iv~~Ll  794 (1236)
                       +..|.|||++++..   ...+.++.++
T Consensus       234 ~~~~~~t~l~~~~~~~~~~~~~~~~~li  261 (413)
T PHA02875        234 IEGEECTILDMICNMCTNLESEAIDALI  261 (413)
T ss_pred             cCCCchHHHHHHHhhcCCcccHHHHHHH
Confidence             67889999987643   3456666555

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.97  E-value=3.9e-31  Score=311.70  Aligned_cols=246  Identities=23%  Similarity=0.286  Sum_probs=211.7

Q ss_pred             CcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcc
Q psy8898          24 GLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKD  103 (1236)
Q Consensus        24 g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (1236)
                      .+++||.|+..|+.++|++|+++|+++|..+..|.||||+|+..|+.+++++                            
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~----------------------------   53 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKL----------------------------   53 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHH----------------------------
Confidence            4689999999999999999999999999999999999999999999999988                            


Q ss_pred             hhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCC
Q psy8898         104 RSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSG  183 (1236)
Q Consensus       104 v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (1236)
                         |+++|++++..+..+.||||.|+..|+.++++.+++......                                   
T Consensus        54 ---Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~-----------------------------------   95 (413)
T PHA02875         54 ---LMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFAD-----------------------------------   95 (413)
T ss_pred             ---HHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCccc-----------------------------------
Confidence               999999999999999999999999999999999887532100                                   


Q ss_pred             CCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q psy8898         184 GDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVC  263 (1236)
Q Consensus       184 ~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv  263 (1236)
                                              ......|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++
T Consensus        96 ------------------------~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v  151 (413)
T PHA02875         96 ------------------------DVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGI  151 (413)
T ss_pred             ------------------------ccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence                                    00011488999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHH
Q psy8898         264 SLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLL  343 (1236)
Q Consensus       264 ~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~  343 (1236)
                      ++|+++|++++.+|..|.||                                                            
T Consensus       152 ~~Ll~~g~~~~~~d~~g~Tp------------------------------------------------------------  171 (413)
T PHA02875        152 ELLIDHKACLDIEDCCGCTP------------------------------------------------------------  171 (413)
T ss_pred             HHHHhcCCCCCCCCCCCCCH------------------------------------------------------------
Confidence            99999999998888766665                                                            


Q ss_pred             HHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCC
Q psy8898         344 IDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCP  423 (1236)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~  423 (1236)
                                                                                 ||.|+..|+.+++++|++. |
T Consensus       172 -----------------------------------------------------------L~~A~~~g~~eiv~~Ll~~-g  191 (413)
T PHA02875        172 -----------------------------------------------------------LIIAMAKGDIAICKMLLDS-G  191 (413)
T ss_pred             -----------------------------------------------------------HHHHHHcCCHHHHHHHHhC-C
Confidence                                                                       4455667777888888877 6


Q ss_pred             CcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHh
Q psy8898         424 HIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQ  481 (1236)
Q Consensus       424 ~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~  481 (1236)
                      .+++..+..+. .||+|+|+..|+.+++++|+++|++++... ..+..+.||+++++.
T Consensus       192 a~~n~~~~~~~-~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~-~~~~~~~t~l~~~~~  247 (413)
T PHA02875        192 ANIDYFGKNGC-VAALCYAIENNKIDIVRLFIKRGADCNIMF-MIEGEECTILDMICN  247 (413)
T ss_pred             CCCCcCCCCCC-chHHHHHHHcCCHHHHHHHHHCCcCcchHh-hcCCCchHHHHHHHh
Confidence            77777666542 589999999999999999999999997653 245678899988764

>PHA02798 ankyrin-like protein; Provisional

Probab=99.97  E-value=2.4e-31  Score=318.51  Aligned_cols=280  Identities=21%  Similarity=0.244  Sum_probs=219.5

Q ss_pred             cHHHHHHHHHcCCCccccCCCCcchhhHHhh--cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHh-----CCCceEEe
Q psy8898           3 RKDVVEYLLASGASIHARDDGGLHPLHNACS--FGHADVVRLLLEADANPNTRDNWNFTPLHEAAAK-----GKTDVCIG   75 (1236)
Q Consensus         3 ~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~--~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~-----g~~~iv~~   75 (1236)
                      .+++|+.|++.+ +++.. ..|.|+++.+..  .++.++|++|+++|+++|..|..|.||||.|+.+     ++.+++++
T Consensus        17 ~~~~v~~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~   94 (489)
T PHA02798         17 KLSTVKLLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKI   94 (489)
T ss_pred             cHHHHHHHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHH
Confidence            468999999865 45443 457787774443  4589999999999999999999999999999865     56777766


Q ss_pred             eeccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccC---hHHHHHHHHhcCCCCCCCCC
Q psy8898          76 IYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAED---VRSLLQDAMAQYPGAPSCAE  152 (1236)
Q Consensus        76 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~---~~~~v~~l~~~~~~~~~~~~  152 (1236)
                                                     |+++|+|++.+|..|+||||+|+.++   +.+++               
T Consensus        95 -------------------------------Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv---------------  128 (489)
T PHA02798         95 -------------------------------LIENGADINKKNSDGETPLYCLLSNGYINNLEIL---------------  128 (489)
T ss_pred             -------------------------------HHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHH---------------
Confidence                                           99999999999999999999999765   34444               


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CCchHHHHHHhcCc--
Q psy8898         153 TASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LGLVPLHNACSYGH--  226 (1236)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g~T~L~~Aa~~g~--  226 (1236)
                                                                       ++|+++|++++    .|.||||+|++.|+  
T Consensus       129 -------------------------------------------------~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~  159 (489)
T PHA02798        129 -------------------------------------------------LFMIENGADTTLLDKDGFTMLQVYLQSNHHI  159 (489)
T ss_pred             -------------------------------------------------HHHHHcCCCccccCCCCCcHHHHHHHcCCcc
Confidence                                                             44445566655    68899999999887  


Q ss_pred             -HHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHc----CcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhcc
Q psy8898         227 -FEVTEMLIKAGANVNAMD-LWQFTPLHEAASK----SRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEF  300 (1236)
Q Consensus       227 -~~iv~~Ll~~ga~~n~~d-~~g~TpL~~A~~~----g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~  300 (1236)
                       .+++++|++.|++++..+ ..|.||||.++..    ++.+++++|+++|++++..+..+.++++-.             
T Consensus       160 ~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~-------------  226 (489)
T PHA02798        160 DIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEY-------------  226 (489)
T ss_pred             hHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHH-------------
Confidence             899999999999988874 5688999988764    478899999999998888776666553210             


Q ss_pred             CcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHH
Q psy8898         301 KGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQ  380 (1236)
Q Consensus       301 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~  380 (1236)
                                         +                                                            
T Consensus       227 -------------------l------------------------------------------------------------  227 (489)
T PHA02798        227 -------------------L------------------------------------------------------------  227 (489)
T ss_pred             -------------------H------------------------------------------------------------
Confidence                               0                                                            


Q ss_pred             HhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCC
Q psy8898         381 VAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD  460 (1236)
Q Consensus       381 ~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~  460 (1236)
                                          ..+..+...++.+++++|+.  +.++|.++..|  +||||+|+..|+.+++++|+++||+
T Consensus       228 --------------------~~l~~~~~~~~~~i~~~l~~--~~dvN~~d~~G--~TPL~~A~~~~~~~~v~~LL~~GAd  283 (489)
T PHA02798        228 --------------------NSLLYDNKRFKKNILDFIFS--YIDINQVDELG--FNPLYYSVSHNNRKIFEYLLQLGGD  283 (489)
T ss_pred             --------------------HHHHhhcccchHHHHHHHHh--cCCCCCcCcCC--ccHHHHHHHcCcHHHHHHHHHcCCc
Confidence                                01222334566777877765  36778777655  5999999999999999999999999


Q ss_pred             CCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCC
Q psy8898         461 VHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAAN  499 (1236)
Q Consensus       461 ~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~  499 (1236)
                      ++    .+|..|+|||++|+.+++.++++.|++.+...+
T Consensus       284 in----~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~  318 (489)
T PHA02798        284 IN----IITELGNTCLFTAFENESKFIFNSILNKKPNKN  318 (489)
T ss_pred             cc----ccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHH
Confidence            95    455599999999999999999999987665443

>KOG4369|consensus

Probab=99.97  E-value=3.6e-30  Score=293.21  Aligned_cols=129  Identities=22%  Similarity=0.259  Sum_probs=91.4

Q ss_pred             cccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCC-CCCCchHHHHHHH
Q psy8898         672 KGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEK-NKELLAPIHLAAD  750 (1236)
Q Consensus       672 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~-d~~G~T~Lh~A~~  750 (1236)
                      -.|+|-.||..||.|+|..|+.++.....++..|.+||.+|+..   ||..+|+.|+++-++++.+ |+.+.|+|.+||.
T Consensus       757 ~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaata---gh~tvV~~llk~ha~veaQsdrtkdt~lSlacs  833 (2131)
T KOG4369|consen  757 IKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATA---GHITVVQDLLKAHADVEAQSDRTKDTMLSLACS  833 (2131)
T ss_pred             ccccccccccCccHHHHHHHHHhcccccccccccchhhhhhccc---CchHHHHHHHhhhhhhhhhcccccCceEEEecC
Confidence            34667777777777777777777766666666677777777765   6777777777777777654 5566677777777


Q ss_pred             hCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q psy8898         751 LGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIV  803 (1236)
Q Consensus       751 ~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  803 (1236)
                      .|+.++|++||.+|++-..++-...|||.+|..-|..++|++|+.+|++++..
T Consensus       834 ggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSr  886 (2131)
T KOG4369|consen  834 GGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSR  886 (2131)
T ss_pred             CCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccc
Confidence            77777777777777766666666677777777777777777777777665543

>KOG4369|consensus

Probab=99.96  E-value=2e-28  Score=279.18  Aligned_cols=221  Identities=28%  Similarity=0.266  Sum_probs=176.9

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHH-------HHHHHhcCCCCccc-CCCCCChhhhhcccCc
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLK-NTDGKTALDLAVPCTR  615 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~-~~~g~t~L~~a~~~~~  615 (1236)
                      -.|+|..||..||.|+|++|+.+|+++..+|..|.+||.+|+       ++.|+.+.+++... |+.+.|+|-+||    
T Consensus       757 ~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac----  832 (2131)
T KOG4369|consen  757 IKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC----  832 (2131)
T ss_pred             ccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec----
Confidence            578999999999999999999999999999999999998875       78899998888764 678889998887    


Q ss_pred             ccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccC
Q psy8898         616 AVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSD  695 (1236)
Q Consensus       616 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~  695 (1236)
                        ..+..+++++|.......                              ..++....|||..|...|..++|..||..+
T Consensus       833 --sggr~~vvelLl~~gank------------------------------ehrnvsDytPlsla~Sggy~~iI~~llS~G  880 (2131)
T KOG4369|consen  833 --SGGRTRVVELLLNAGANK------------------------------EHRNVSDYTPLSLARSGGYTKIIHALLSSG  880 (2131)
T ss_pred             --CCCcchHHHHHHHhhccc------------------------------cccchhhcCchhhhcCcchHHHHHHHhhcc
Confidence              667778888776633221                              224445677888888888888888888887


Q ss_pred             CcccCCCC--CCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCC-CCCchHHHHHHHhCCHHHHHHHHHCCCCccccCC
Q psy8898         696 VVNFKHPY--TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN-KELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDV  772 (1236)
Q Consensus       696 ~~~~~~~~--~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d-~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~  772 (1236)
                      .....+..  .|..||++|..+   ||.+.++.|++.|-|+|.+= -+.+|+|-+|+..|+.++|.+||.+.+++..+-+
T Consensus       881 seInSrtgSklgisPLmlatmn---gh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRak  957 (2131)
T KOG4369|consen  881 SEINSRTGSKLGISPLMLATMN---GHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAK  957 (2131)
T ss_pred             cccccccccccCcchhhhhhhc---cccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcc
Confidence            64444332  278888888886   78888888888888888653 3456888888888888888888888888888888


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q psy8898         773 LGQTALHRTARDDKTQAVRVLLSHNADTSIV  803 (1236)
Q Consensus       773 ~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  803 (1236)
                      .|.|||+-++..|.+|+=++||..|||.+..
T Consensus       958 tgltplme~AsgGyvdvg~~li~~gad~nas  988 (2131)
T KOG4369|consen  958 TGLTPLMEMASGGYVDVGNLLIAAGADTNAS  988 (2131)
T ss_pred             cCCcccchhhcCCccccchhhhhcccccccC
Confidence            8888888888888888888888888887763

>KOG0509|consensus

Probab=99.96  E-value=2.7e-29  Score=278.50  Aligned_cols=198  Identities=33%  Similarity=0.386  Sum_probs=181.7

Q ss_pred             CCcHHHHHHHHHc-CCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHhCCCceEEeeec
Q psy8898           1 YGRKDVVEYLLAS-GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD-NWNFTPLHEAAAKGKTDVCIGIYF   78 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~-ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d-~~g~t~L~~A~~~g~~~iv~~Ll~   78 (1236)
                      ||.++.|+.|++. |.+++..|.+|-|+||.||.+++.+++++|+++||++|..+ .-+.||||+|+++|+..+|++   
T Consensus        54 ~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~l---  130 (600)
T KOG0509|consen   54 YGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDL---  130 (600)
T ss_pred             cchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHH---
Confidence            7999999999999 99999999999999999999999999999999999999988 678999999999999999988   


Q ss_pred             cccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy8898          79 AEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPP  158 (1236)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~  158 (1236)
                                                  |+++|||++.+|.+|.+|||.|++.++.-+|-+++.+..             
T Consensus       131 ----------------------------LlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~-------------  169 (600)
T KOG0509|consen  131 ----------------------------LLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGA-------------  169 (600)
T ss_pred             ----------------------------HHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcc-------------
Confidence                                        999999999999999999999999999888877775431             


Q ss_pred             CCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCC
Q psy8898         159 PSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGA  238 (1236)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga  238 (1236)
                                                                     +.+..+++|+||||+|+..|+...+..|++.|+
T Consensus       170 -----------------------------------------------d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a  202 (600)
T KOG0509|consen  170 -----------------------------------------------DIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGA  202 (600)
T ss_pred             -----------------------------------------------cCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcc
Confidence                                                           122334479999999999999988999999999


Q ss_pred             CCCCCC-CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q psy8898         239 NVNAMD-LWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPT  289 (1236)
Q Consensus       239 ~~n~~d-~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~  289 (1236)
                      .++..| ..|.||||.|+..|+..++.+|++.|++.+..|.+|.||+++|..
T Consensus       203 ~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~  254 (600)
T KOG0509|consen  203 SLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQE  254 (600)
T ss_pred             cccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHH
Confidence            999988 999999999999999999997788889999999999999888743

>KOG0509|consensus

Probab=99.95  E-value=2.8e-27  Score=262.59  Aligned_cols=211  Identities=31%  Similarity=0.422  Sum_probs=176.8

Q ss_pred             hhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHH
Q psy8898         399 LESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHE  478 (1236)
Q Consensus       399 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~  478 (1236)
                      ....+..|++.|+++.++.|++..+..++..|.+|  .|+||+|+.+++.+++++|+++||++|.....           
T Consensus        44 ~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g--~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~-----------  110 (600)
T KOG0509|consen   44 SLDDIVKATQYGELETVKELVESEGESVNNPDREG--VTLLHWAAINNRLDVARYLISHGADVNAIGGV-----------  110 (600)
T ss_pred             hhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCC--ccceeHHHHcCcHHHHHHHHHcCCCccccCCC-----------
Confidence            34568899999999999999999888888888866  49999999999999999999999999765431           


Q ss_pred             HHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHH
Q psy8898         479 AAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYE  558 (1236)
Q Consensus       479 A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~  558 (1236)
                                                                                      .+.||||+|+++|+..
T Consensus       111 ----------------------------------------------------------------l~stPLHWAar~G~~~  126 (600)
T KOG0509|consen  111 ----------------------------------------------------------------LGSTPLHWAARNGHIS  126 (600)
T ss_pred             ----------------------------------------------------------------CCCCcchHHHHcCcHH
Confidence                                                                            1678999999999999


Q ss_pred             HHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCc
Q psy8898         559 VTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGL  638 (1236)
Q Consensus       559 iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~  638 (1236)
                      +|++|+++||+++.+|.+|.||||+|                                                      
T Consensus       127 vv~lLlqhGAdpt~~D~~G~~~lHla------------------------------------------------------  152 (600)
T KOG0509|consen  127 VVDLLLQHGADPTLKDKQGLTPLHLA------------------------------------------------------  152 (600)
T ss_pred             HHHHHHHcCCCCceecCCCCcHHHHH------------------------------------------------------
Confidence            99999999998877776666555544                                                      


Q ss_pred             ccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCC
Q psy8898         639 HRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYP  718 (1236)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~  718 (1236)
                                                               ++.|+.-+|-+||.++.+...+|.+|+||||+|+..   
T Consensus       153 -----------------------------------------~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAayk---  188 (600)
T KOG0509|consen  153 -----------------------------------------AQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYK---  188 (600)
T ss_pred             -----------------------------------------HHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHh---
Confidence                                                     455566666666666666666666677777777765   


Q ss_pred             ChHHHHHHHHHcCCCCCCCC-CCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHc
Q psy8898         719 KRKAIVESLIRKGAHLNEKN-KELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARD  784 (1236)
Q Consensus       719 ~~~~iv~~Ll~~gadin~~d-~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~  784 (1236)
                      ++...+..|++-|+.++.+| ..|.||||+|+..|+..++++|++.|++.+.+|.+|.||+.+|.+.
T Consensus       189 g~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  189 GFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            44445999999999999888 8999999999999999999988888899999999999999999887

>PHA02795 ankyrin-like protein; Provisional

Probab=99.93  E-value=7.3e-25  Score=243.96  Aligned_cols=123  Identities=18%  Similarity=0.104  Sum_probs=102.3

Q ss_pred             HHHcCCHHHHHHhhccCCcccCCC------CCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhC
Q psy8898         679 ACRQGDPSRVKKFLTSDVVNFKHP------YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLG  752 (1236)
Q Consensus       679 A~~~g~~~~v~~Ll~~~~~~~~~~------~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g  752 (1236)
                      |+..++.+++++|++++.......      ..|.|++|.|+..   ++.+++++|+++|+|+|.+|..|+||||+|+..|
T Consensus       156 A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~---~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g  232 (437)
T PHA02795        156 GICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEP---TVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAG  232 (437)
T ss_pred             HHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhc---CHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcC
Confidence            344455555555555543211111      1278999999986   7899999999999999999999999999999999


Q ss_pred             CHHHHHHHHHCCCCccccCCCCCcHHHHHHHcC--------CHHHHHHHHhCCCCCCccc
Q psy8898         753 HLDVLDTLLRLGAKVNLVDVLGQTALHRTARDD--------KTQAVRVLLSHNADTSIVS  804 (1236)
Q Consensus       753 ~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~--------~~~iv~~Ll~~ga~~~~~~  804 (1236)
                      +.++|++|+++|+++|.+|..|+||||+|+.+|        +.+++++|+++|++++...
T Consensus       233 ~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~  292 (437)
T PHA02795        233 YIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIK  292 (437)
T ss_pred             CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchh
Confidence            999999999999999999999999999999998        4799999999999888754

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.92  E-value=4.7e-25  Score=230.45  Aligned_cols=173  Identities=18%  Similarity=0.149  Sum_probs=149.0

Q ss_pred             CCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC--CCceEEeeeccccCccccccccccCCCCCC
Q psy8898          21 DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKG--KTDVCIGIYFAEHSSKSNQYVYGIGGGTGC   98 (1236)
Q Consensus        21 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~   98 (1236)
                      ...++||||.|+..|+.++|+.|++.   ++..|..|.||||+|+.++  +.+++++                       
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~-----------------------   71 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKF-----------------------   71 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHH-----------------------
Confidence            34678999999999999999999985   5778899999999999865  7889887                       


Q ss_pred             CCCcchhHHHhcCCCCCCcc-cCCCCcchhhccc---ChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCC
Q psy8898          99 PMHKDRSCYLAHGADPFLKN-QEGQTPLDLTVAE---DVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLP  174 (1236)
Q Consensus        99 ~~~~~v~~Ll~~ga~~~~~~-~~g~t~L~~A~~~---~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (1236)
                              |+++|++++.++ ..|+||||+|+..   ++.++++.|+                                 
T Consensus        72 --------Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll---------------------------------  110 (209)
T PHA02859         72 --------LIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILI---------------------------------  110 (209)
T ss_pred             --------HHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHH---------------------------------
Confidence                    999999999987 5899999998753   3455555544                                 


Q ss_pred             CCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CCchHHHHHHh--cCcHHHHHHHHhcCCCCCCCCCCCC
Q psy8898         175 PPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LGLVPLHNACS--YGHFEVTEMLIKAGANVNAMDLWQF  248 (1236)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g~T~L~~Aa~--~g~~~iv~~Ll~~ga~~n~~d~~g~  248 (1236)
                                                     ++|++++    .|.||||+|+.  .++.+++++|++.|++++.+|..|.
T Consensus       111 -------------------------------~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~  159 (209)
T PHA02859        111 -------------------------------DSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNN  159 (209)
T ss_pred             -------------------------------HCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCC
Confidence                                           4555555    69999999986  4789999999999999999999999


Q ss_pred             cHHHH-HHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchh
Q psy8898         249 TPLHE-AASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE  291 (1236)
Q Consensus       249 TpL~~-A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  291 (1236)
                      ||||. |+..++.+++++|+++|++++.+|..|+|||++|..++
T Consensus       160 t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        160 NILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             cHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            99996 56788999999999999999999999999999986554

>PHA02795 ankyrin-like protein; Provisional

Probab=99.92  E-value=8.6e-25  Score=243.39  Aligned_cols=206  Identities=13%  Similarity=0.022  Sum_probs=177.3

Q ss_pred             HHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCC------CCCCCCCCHHHHHHH--hCCCceEEeeec
Q psy8898           7 VEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPN------TRDNWNFTPLHEAAA--KGKTDVCIGIYF   78 (1236)
Q Consensus         7 v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n------~~d~~g~t~L~~A~~--~g~~~iv~~Ll~   78 (1236)
                      -+|++++|+++|.++.+|     +|+..+..|++++|+++|+++|      ..+..++|+||+|+.  .|+.++|++   
T Consensus        65 ~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~---  136 (437)
T PHA02795         65 YDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDF---  136 (437)
T ss_pred             HHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHH---
Confidence            589999999999998888     9999999999999999999999      888999999999999  889999988   


Q ss_pred             cccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy8898          79 AEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPP  158 (1236)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~  158 (1236)
                                                  |+++|||++..  ++.||||+|+..++.++++.|+++.........      
T Consensus       137 ----------------------------LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~------  180 (437)
T PHA02795        137 ----------------------------MVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVK------  180 (437)
T ss_pred             ----------------------------HHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCccccccc------
Confidence                                        99999999974  458999999999999999999876421100000      


Q ss_pred             CCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCC
Q psy8898         159 PSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGA  238 (1236)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga  238 (1236)
                                                         ++++             ...+.|++|.|+..++.+++++|+++|+
T Consensus       181 -----------------------------------~~l~-------------~~~~~t~l~~a~~~~~~eIve~LIs~GA  212 (437)
T PHA02795        181 -----------------------------------LDLY-------------KIIQYTRGFLVDEPTVLEIYKLCIPYIE  212 (437)
T ss_pred             -----------------------------------chhh-------------hhhccchhHHHHhcCHHHHHHHHHhCcC
Confidence                                               0000             0126789999999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcC------
Q psy8898         239 NVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQG------  312 (1236)
Q Consensus       239 ~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g------  312 (1236)
                      ++|.+|..|+||||+|+..|+.+++++|+++|++++.++..|.|||                     +.|+..|      
T Consensus       213 DIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpL---------------------h~Aa~~g~~~~~~  271 (437)
T PHA02795        213 DINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCL---------------------DVAVDRGSVIARR  271 (437)
T ss_pred             CcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH---------------------HHHHHcCCccccc
Confidence            9999999999999999999999999999999999999999999995                     5566666      


Q ss_pred             --ChHHHHHhhhccc
Q psy8898         313 --DPSRVKKFLTSDV  325 (1236)
Q Consensus       313 --~~~~v~~ll~~~~  325 (1236)
                        +.++++.|+..+.
T Consensus       272 ~~~~eIvelLL~~ga  286 (437)
T PHA02795        272 ETHLKILEILLREPL  286 (437)
T ss_pred             ccHHHHHHHHHhCCC
Confidence              4689998887654

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.92  E-value=4.8e-24  Score=222.86  Aligned_cols=173  Identities=20%  Similarity=0.213  Sum_probs=145.3

Q ss_pred             ccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHH---------HHHHHhcCCCCcccC-CCCCChhhhhcc
Q psy8898         543 AGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA---------AKALLQHGADINLKN-TDGKTALDLAVP  612 (1236)
Q Consensus       543 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~---------~~~Ll~~g~d~~~~~-~~g~t~L~~a~~  612 (1236)
                      .++|||+.|+..|+.++|+.|++.   ++..|..|.||||+|+         +++|+++|++++.++ ..|.||||+|+.
T Consensus        20 ~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~   96 (209)
T PHA02859         20 RYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS   96 (209)
T ss_pred             ccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence            478999999999999999999975   5677889999999886         568999999999886 478888887641


Q ss_pred             cCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhh
Q psy8898         613 CTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFL  692 (1236)
Q Consensus       613 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll  692 (1236)
                      .                                                                  ...++.+++++|+
T Consensus        97 ~------------------------------------------------------------------~~~~~~eiv~~Ll  110 (209)
T PHA02859         97 F------------------------------------------------------------------NKNVEPEILKILI  110 (209)
T ss_pred             h------------------------------------------------------------------CccccHHHHHHHH
Confidence            0                                                                  1234678899999


Q ss_pred             ccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHH-HHHhCCHHHHHHHHHCCCCccccC
Q psy8898         693 TSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHL-AADLGHLDVLDTLLRLGAKVNLVD  771 (1236)
Q Consensus       693 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~-A~~~g~~~iv~~Ll~~ga~~n~~d  771 (1236)
                      +++......+..|.||||+|+.. ..++.+++++|+++|++++.+|..|.||||. |+..++.+++++|+++|++++.+|
T Consensus       111 ~~gadin~~d~~G~TpLh~a~~~-~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d  189 (209)
T PHA02859        111 DSGSSITEEDEDGKNLLHMYMCN-FNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETN  189 (209)
T ss_pred             HCCCCCCCcCCCCCCHHHHHHHh-ccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCC
Confidence            98888777888899999998864 2357899999999999999999999999995 566788999999999999999999


Q ss_pred             CCCCcHHHHHHHcC
Q psy8898         772 VLGQTALHRTARDD  785 (1236)
Q Consensus       772 ~~G~tpL~~A~~~~  785 (1236)
                      ..|+|||++|..++
T Consensus       190 ~~g~tpl~la~~~~  203 (209)
T PHA02859        190 KSGYNCYDLIKFRN  203 (209)
T ss_pred             CCCCCHHHHHhhhh
Confidence            99999999998765

>KOG0505|consensus

Probab=99.90  E-value=7.1e-24  Score=230.03  Aligned_cols=219  Identities=32%  Similarity=0.441  Sum_probs=188.5

Q ss_pred             CcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeecccc
Q psy8898           2 GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEH   81 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~   81 (1236)
                      |+.+-|+.|+..|+++|..+.+|.|+||-+|.-.+.+||++|+++|++||..|+.|+||||.|+..||.+++++      
T Consensus        51 ~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~------  124 (527)
T KOG0505|consen   51 GDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEY------  124 (527)
T ss_pred             ccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHH------
Confidence            67889999999999999999999999999999999999999999999999999999999999999999999988      


Q ss_pred             CccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCc
Q psy8898          82 SSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQ  161 (1236)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~  161 (1236)
                                               ||.+||++...|.+|..|+..+...-..+++...+..... .             
T Consensus       125 -------------------------li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi-~-------------  165 (527)
T KOG0505|consen  125 -------------------------LIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGI-D-------------  165 (527)
T ss_pred             -------------------------HHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcc-c-------------
Confidence                                     9999999999999999999999988877777665543210 0             


Q ss_pred             ccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CCchHHHHHHhcCcHHHHHHHHhcC
Q psy8898         162 YSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LGLVPLHNACSYGHFEVTEMLIKAG  237 (1236)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g~T~L~~Aa~~g~~~iv~~Ll~~g  237 (1236)
                         ++..                     .....-..+.-+...+..|.+..    .|-|+||.|+.+|..++.++|++.|
T Consensus       166 ---iea~---------------------R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag  221 (527)
T KOG0505|consen  166 ---IEAA---------------------RKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAG  221 (527)
T ss_pred             ---HHHH---------------------hhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhc
Confidence               0000                     00001112222455555666555    7999999999999999999999999


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q psy8898         238 ANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPT  289 (1236)
Q Consensus       238 a~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~  289 (1236)
                      .+++.+|.+||||||.|+.-|+.+++++|+++|++.+..+..|.||++++..
T Consensus       222 ~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  222 YSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             cCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence            9999999999999999999999999999999999999999999999999843

>KOG0502|consensus

Probab=99.89  E-value=1e-23  Score=200.46  Aligned_cols=205  Identities=23%  Similarity=0.196  Sum_probs=167.2

Q ss_pred             CcHHHHHHHHHcCCC-ccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898           2 GRKDVVEYLLASGAS-IHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      |+.|++..+..-..+ +...|.+|+++++.|+-.|+.++++.+|.+|+..|..+--+++|+.+++...|.+++       
T Consensus        73 ~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~-------  145 (296)
T KOG0502|consen   73 GNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVV-------  145 (296)
T ss_pred             CCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHH-------
Confidence            455666666555433 334577899999999999999999999999999999999999999999988888876       


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPS  160 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~  160 (1236)
                                                ++.....+|..|+.|.|||+||+..|+..+|+.|++                  
T Consensus       146 --------------------------~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~------------------  181 (296)
T KOG0502|consen  146 --------------------------DLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLN------------------  181 (296)
T ss_pred             --------------------------HHHhhccccCccccCchHhHHHHhcCchHHHHHHHH------------------
Confidence                                      344456678899999999999999998888877665                  


Q ss_pred             cccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CCchHHHHHHhcCcHHHHHHHHhc
Q psy8898         161 QYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LGLVPLHNACSYGHFEVTEMLIKA  236 (1236)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g~T~L~~Aa~~g~~~iv~~Ll~~  236 (1236)
                                                                    .|++..    .-.|+|.+|+..|..++|++|+++
T Consensus       182 ----------------------------------------------~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r  215 (296)
T KOG0502|consen  182 ----------------------------------------------SGADPDALGKYRESALSLATRGGYTDIVELLLTR  215 (296)
T ss_pred             ----------------------------------------------cCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhc
Confidence                                                          344444    346899999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHH
Q psy8898         237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSR  316 (1236)
Q Consensus       237 ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~  316 (1236)
                      +.|+|..|.+|.|||-+|++.|+.+||+.||+.||+++..+..|.++                     +-.|+..|+- +
T Consensus       216 ~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~---------------------mdlAValGyr-~  273 (296)
T KOG0502|consen  216 EVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWI---------------------MDLAVALGYR-I  273 (296)
T ss_pred             CCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcH---------------------HHHHHHhhhH-H
Confidence            99999999999999999999999999999999999999999888887                     4456777776 7


Q ss_pred             HHHhhhccc
Q psy8898         317 VKKFLTSDV  325 (1236)
Q Consensus       317 v~~ll~~~~  325 (1236)
                      |+..+++..
T Consensus       274 Vqqvie~h~  282 (296)
T KOG0502|consen  274 VQQVIEKHA  282 (296)
T ss_pred             HHHHHHHHH
Confidence            777766543

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.88  E-value=2e-22  Score=254.86  Aligned_cols=188  Identities=24%  Similarity=0.280  Sum_probs=164.9

Q ss_pred             HHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCcc
Q psy8898           5 DVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSK   84 (1236)
Q Consensus         5 ~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~   84 (1236)
                      ++-..+.+.++.  ..+.++.++|+.||..|+.++++.|++.|+|+|..|..|+||||+|+.+|+.+++++         
T Consensus       508 ~v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~---------  576 (823)
T PLN03192        508 NVGDLLGDNGGE--HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLV---------  576 (823)
T ss_pred             cHHHHHhhcccc--cCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHH---------
Confidence            334444444443  235567899999999999999999999999999999999999999999999999988         


Q ss_pred             ccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccc
Q psy8898          85 SNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSN  164 (1236)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~  164 (1236)
                                            |+++|++++.+|.+|+||||+|+..|+.++++.|+.....                  
T Consensus       577 ----------------------Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~------------------  616 (823)
T PLN03192        577 ----------------------LLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASI------------------  616 (823)
T ss_pred             ----------------------HHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcc------------------
Confidence                                  9999999999999999999999999999999988753210                  


Q ss_pred             cccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCC
Q psy8898         165 TSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMD  244 (1236)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d  244 (1236)
                                                                  .+...|.++||.||..|+.++++.|+++|+++|.+|
T Consensus       617 --------------------------------------------~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d  652 (823)
T PLN03192        617 --------------------------------------------SDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSED  652 (823)
T ss_pred             --------------------------------------------cCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCC
Confidence                                                        001136689999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCC-CCccccc
Q psy8898         245 LWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHS-KSAIDVA  287 (1236)
Q Consensus       245 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g-~t~l~~a  287 (1236)
                      .+|+||||+|+..|+.+++++|+++|++++..|..| .||++++
T Consensus       653 ~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~  696 (823)
T PLN03192        653 HQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELR  696 (823)
T ss_pred             CCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Confidence            999999999999999999999999999999999988 7886554

>KOG0514|consensus

Probab=99.87  E-value=9.1e-22  Score=201.68  Aligned_cols=160  Identities=28%  Similarity=0.411  Sum_probs=138.5

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCC-CCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCc
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHG-ANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDH  622 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g-~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~  622 (1236)
                      |.|+||||+.++++++|+.||+.| ++++.++.-|+||+|+++.-.|-                                
T Consensus       268 GNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk--------------------------------  315 (452)
T KOG0514|consen  268 GNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLK--------------------------------  315 (452)
T ss_pred             CCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhc--------------------------------
Confidence            889999999999999999999987 56666666666666555433221                                


Q ss_pred             hhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCC
Q psy8898         623 KKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHP  702 (1236)
Q Consensus       623 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~  702 (1236)
                                                                                ...+.++|..|+.-+.++.+-.
T Consensus       316 ----------------------------------------------------------~~~d~~vV~~LF~mgnVNaKAs  337 (452)
T KOG0514|consen  316 ----------------------------------------------------------QPADRTVVERLFKMGDVNAKAS  337 (452)
T ss_pred             ----------------------------------------------------------chhhHHHHHHHHhccCcchhhh
Confidence                                                                      1234568888888888888888


Q ss_pred             CCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHC-CCCccccCCCCCcHHHHH
Q psy8898         703 YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL-GAKVNLVDVLGQTALHRT  781 (1236)
Q Consensus       703 ~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~-ga~~n~~d~~G~tpL~~A  781 (1236)
                      +-|+|+||+|+..   |..++|+.||..|+|+|.+|.+|-|+||.||+.||.|||++||.. ++|+...|.+|-|+|++|
T Consensus       338 Q~gQTALMLAVSH---Gr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IA  414 (452)
T KOG0514|consen  338 QHGQTALMLAVSH---GRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIA  414 (452)
T ss_pred             hhcchhhhhhhhc---CcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhH
Confidence            8899999999998   899999999999999999999999999999999999999999975 689999999999999999


Q ss_pred             HHcCCHHHHHHHHhC
Q psy8898         782 ARDDKTQAVRVLLSH  796 (1236)
Q Consensus       782 ~~~~~~~iv~~Ll~~  796 (1236)
                      .+.||.||.-+|..+
T Consensus       415 leagh~eIa~mlYa~  429 (452)
T KOG0514|consen  415 LEAGHREIAVMLYAH  429 (452)
T ss_pred             HhcCchHHHHHHHHH
Confidence            999999999888765

>KOG0502|consensus

Probab=99.87  E-value=6.4e-22  Score=188.28  Aligned_cols=172  Identities=22%  Similarity=0.267  Sum_probs=132.8

Q ss_pred             cCCCCcchhhHHhhcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCC
Q psy8898          20 RDDGGLHPLHNACSFGHADVVRLLLEADAN-PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGC   98 (1236)
Q Consensus        20 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~-~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~   98 (1236)
                      ++..|..-+-.|...|+.+++..++...++ +...|.+|+.+++.|+-.|+.+++..                       
T Consensus        58 ~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~st-----------------------  114 (296)
T KOG0502|consen   58 RNALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVST-----------------------  114 (296)
T ss_pred             HHhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeee-----------------------
Confidence            355677788889999999999988876655 55778889999999999999999998                       


Q ss_pred             CCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCc
Q psy8898          99 PMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQ  178 (1236)
Q Consensus        99 ~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (1236)
                              ++.+|+..|..+--+++|+.+++...+.+++..+.+..-                                 
T Consensus       115 --------tltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~V---------------------------------  153 (296)
T KOG0502|consen  115 --------TLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKV---------------------------------  153 (296)
T ss_pred             --------eecccccCCccccccCChhhHHHHHHHHHHHHHHhhccc---------------------------------
Confidence                    899999999998888888888887777776655443210                                 


Q ss_pred             cCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy8898         179 YSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKS  258 (1236)
Q Consensus       179 ~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g  258 (1236)
                                                   .+-+..|+|||.+|+..|++.+|++|++.|+|++...+...|+|.+|++.|
T Consensus       154 -----------------------------N~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~gg  204 (296)
T KOG0502|consen  154 -----------------------------NACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGG  204 (296)
T ss_pred             -----------------------------cCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCC
Confidence                                         001113778888888888888888888888887777777778888888888


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCCcc
Q psy8898         259 RLEVCSLLLSEGADPTLHNCHSKSAI  284 (1236)
Q Consensus       259 ~~~iv~~Ll~~ga~~~~~~~~g~t~l  284 (1236)
                      ..++|++|++++.|+|.-|.+|-|||
T Consensus       205 ytdiV~lLL~r~vdVNvyDwNGgTpL  230 (296)
T KOG0502|consen  205 YTDIVELLLTREVDVNVYDWNGGTPL  230 (296)
T ss_pred             hHHHHHHHHhcCCCcceeccCCCcee
Confidence            88888888888777777776666653

>KOG0507|consensus

Probab=99.86  E-value=1.9e-21  Score=218.07  Aligned_cols=261  Identities=29%  Similarity=0.337  Sum_probs=194.1

Q ss_pred             hhHHHHHHhCCCHHHHHHHHhhCC------------CcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCC
Q psy8898         400 ESQLLEASKGGDMTVVTRLLSSCP------------HIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNA  467 (1236)
Q Consensus       400 ~~~L~~A~~~g~~~~v~~Ll~~~~------------~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~  467 (1236)
                      .+.|..|++.|+.+.+..|++..+            ...+..|.++  .|+||.|+.+|+.+++++|+++.+-++..+  
T Consensus         4 ~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~g--fTalhha~Lng~~~is~llle~ea~ldl~d--   79 (854)
T KOG0507|consen    4 KQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSG--FTLLHHAVLNGQNQISKLLLDYEALLDLCD--   79 (854)
T ss_pred             hhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccc--hhHHHHHHhcCchHHHHHHhcchhhhhhhh--
Confidence            356889999999999999998532            2355666654  699999999999999999999998875444  


Q ss_pred             CccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchh
Q psy8898         468 TDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVP  547 (1236)
Q Consensus       468 ~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~  547 (1236)
                        ..|.+|||+|+.+|+.+++++++.+....+                            ....           .|.||
T Consensus        80 --~kg~~plhlaaw~g~~e~vkmll~q~d~~n----------------------------a~~~-----------e~~tp  118 (854)
T KOG0507|consen   80 --TKGILPLHLAAWNGNLEIVKMLLLQTDILN----------------------------AVNI-----------ENETP  118 (854)
T ss_pred             --ccCcceEEehhhcCcchHHHHHHhcccCCC----------------------------cccc-----------cCcCc
Confidence              489999999999999888888865542111                            1111           27889


Q ss_pred             HHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHH
Q psy8898         548 LHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEEL  627 (1236)
Q Consensus       548 L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~  627 (1236)
                      ||.|++.||.++|.+|+.+|+++-.++..+.                          |++..|+      .-|...++++
T Consensus       119 lhlaaqhgh~dvv~~Ll~~~adp~i~nns~~--------------------------t~ldlA~------qfgr~~Vvq~  166 (854)
T KOG0507|consen  119 LHLAAQHGHLEVVFYLLKKNADPFIRNNSKE--------------------------TVLDLAS------RFGRAEVVQM  166 (854)
T ss_pred             cchhhhhcchHHHHHHHhcCCCccccCcccc--------------------------cHHHHHH------HhhhhHHHHH
Confidence            9999999999999999998887765555544                          4444443      2223333333


Q ss_pred             HHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCCh
Q psy8898         628 LEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT  707 (1236)
Q Consensus       628 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t  707 (1236)
                      |...                                                    +. .+.++...+  ....+..+.+
T Consensus       167 ll~~----------------------------------------------------~~-~~~~~~~~~--~~~~~~~~~~  191 (854)
T KOG0507|consen  167 LLQK----------------------------------------------------KF-PVQSSLRVG--DIKRPFPAIY  191 (854)
T ss_pred             Hhhh----------------------------------------------------cc-chhhcccCC--CCCCCCCCcC
Confidence            3220                                                    00 011111112  2334455899


Q ss_pred             HHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHc---
Q psy8898         708 PLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARD---  784 (1236)
Q Consensus       708 ~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~---  784 (1236)
                      |||.|+++   ||.++++.|++.|.|+|.....| |+||.|+.+|..++|++|++.|.+..++|.+|.|+|.+-...   
T Consensus       192 plHlaakn---gh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~  267 (854)
T KOG0507|consen  192 PLHLAAKN---GHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQEN  267 (854)
T ss_pred             Ccchhhhc---chHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcchh
Confidence            99999997   89999999999999999999887 999999999999999999999999999999999999987653   


Q ss_pred             CCHHHHHHHHhC
Q psy8898         785 DKTQAVRVLLSH  796 (1236)
Q Consensus       785 ~~~~iv~~Ll~~  796 (1236)
                      -..+++-++...
T Consensus       268 ~~~ei~ga~~~~  279 (854)
T KOG0507|consen  268 RRYEIAGAVKNF  279 (854)
T ss_pred             hhhhhhhhhhcc
Confidence            345565555544

>KOG0507|consensus

Probab=99.86  E-value=1.1e-21  Score=219.81  Aligned_cols=246  Identities=28%  Similarity=0.274  Sum_probs=178.3

Q ss_pred             chhhHHhhcCCHHHHHHHHHCC-------------CCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCcccccccccc
Q psy8898          26 HPLHNACSFGHADVVRLLLEAD-------------ANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGI   92 (1236)
Q Consensus        26 t~L~~A~~~g~~~iv~~Ll~~g-------------a~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~   92 (1236)
                      +-|.-||..|+++.|..|++.-             -+.|..|-+|+|+||.|+.+|+.+++++                 
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~l-----------------   67 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKL-----------------   67 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHH-----------------
Confidence            4577899999999999999751             2357889999999999999999999988                 


Q ss_pred             CCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCC
Q psy8898          93 GGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVS  172 (1236)
Q Consensus        93 ~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (1236)
                                    |+++.+-++.++..|.+|||+|+.+|+.++++.++.+...                  .       
T Consensus        68 --------------lle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~------------------~-------  108 (854)
T KOG0507|consen   68 --------------LLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDI------------------L-------  108 (854)
T ss_pred             --------------HhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccC------------------C-------
Confidence                          8888888888877777777777777766666666543200                  0       


Q ss_pred             CCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy8898         173 LPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLH  252 (1236)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~  252 (1236)
                                                         .+.-..|.||||.|++.||.++|.+|+++|++.-.+|..+.|+|.
T Consensus       109 -----------------------------------na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ld  153 (854)
T KOG0507|consen  109 -----------------------------------NAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLD  153 (854)
T ss_pred             -----------------------------------CcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHH
Confidence                                               000013566666666666666666666666666666666666666


Q ss_pred             HHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCC
Q psy8898         253 EAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPY  332 (1236)
Q Consensus       253 ~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~  332 (1236)
                      .|++-|+.++|++|++.......                                            +...         
T Consensus       154 lA~qfgr~~Vvq~ll~~~~~~~~--------------------------------------------~~~~---------  180 (854)
T KOG0507|consen  154 LASRFGRAEVVQMLLQKKFPVQS--------------------------------------------SLRV---------  180 (854)
T ss_pred             HHHHhhhhHHHHHHhhhccchhh--------------------------------------------cccC---------
Confidence            66666666666666664111000                                            0000         


Q ss_pred             CCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCH
Q psy8898         333 TGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDM  412 (1236)
Q Consensus       333 ~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~  412 (1236)
                                                                                -..+......++||.|+++|+.
T Consensus       181 ----------------------------------------------------------~~~~~~~~~~~plHlaakngh~  202 (854)
T KOG0507|consen  181 ----------------------------------------------------------GDIKRPFPAIYPLHLAAKNGHV  202 (854)
T ss_pred             ----------------------------------------------------------CCCCCCCCCcCCcchhhhcchH
Confidence                                                                      0011122344578899999999


Q ss_pred             HHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHh
Q psy8898         413 TVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQ  481 (1236)
Q Consensus       413 ~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~  481 (1236)
                      ++++.|++. |.++|....+|   |+||-|+..|..++|.+|++.|.+.+.    +|.+|+|+|.+-..
T Consensus       203 ~~~~~ll~a-g~din~~t~~g---talheaalcgk~evvr~ll~~gin~h~----~n~~~qtaldil~d  263 (854)
T KOG0507|consen  203 ECMQALLEA-GFDINYTTEDG---TALHEAALCGKAEVVRFLLEIGINTHI----KNQHGQTALDIIID  263 (854)
T ss_pred             HHHHHHHhc-CCCcccccccc---hhhhhHhhcCcchhhhHHHhhcccccc----ccccchHHHHHHHh
Confidence            999999998 89999999888   999999999999999999999999854    45599999987665

>KOG0505|consensus

Probab=99.85  E-value=1.5e-21  Score=212.19  Aligned_cols=77  Identities=38%  Similarity=0.576  Sum_probs=73.2

Q ss_pred             CcCchhhhccccccccccccccccccccchhHhhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q psy8898        1032 QGVDQLSMAGGLETGTKKKKKNMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGA 1111 (1236)
Q Consensus      1032 ~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~lh~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 1111 (1236)
                      .|.|.||+|+..+           |..+.++|+++|.+++.+|.+||||||.||.+|..+++++|+++|++++.....|.
T Consensus       197 rG~T~lHvAaa~G-----------y~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~  265 (527)
T KOG0505|consen  197 RGATALHVAAANG-----------YTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGE  265 (527)
T ss_pred             ccchHHHHHHhhh-----------HHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCC
Confidence            3899999999887           88899999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHh
Q psy8898        1112 TPLDLVRE 1119 (1236)
Q Consensus      1112 t~l~~a~~ 1119 (1236)
                      ||+.+|-+
T Consensus       266 ~p~dv~de  273 (527)
T KOG0505|consen  266 TPLDVADE  273 (527)
T ss_pred             CCccchhh
Confidence            99999754

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.84  E-value=1.3e-20  Score=237.67  Aligned_cols=247  Identities=24%  Similarity=0.288  Sum_probs=174.9

Q ss_pred             cCchhhHHHHHHhCCCHHHHHHHHhhC-CCcccccCCCCCCchHHH-HHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCC
Q psy8898         396 VVDLESQLLEASKGGDMTVVTRLLSSC-PHIVNCRDLDGRHSTPLH-FAAGYNRVAVVEYLLAHGADVHSKDNATDKWGF  473 (1236)
Q Consensus       396 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~g~t~L~-~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~  473 (1236)
                      ..+.+.+++.|++.|+.+.++.+++.. +.++|..|..|  .|||| .|+..++.+++++|+++|+        .+..|.
T Consensus        14 ~~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G--~t~Lh~~A~~~~~~eiv~lLl~~g~--------~~~~G~   83 (743)
T TIGR00870        14 LSDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLG--RSALFVAAIENENLELTELLLNLSC--------RGAVGD   83 (743)
T ss_pred             CCHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccc--hhHHHHHHHhcChHHHHHHHHhCCC--------CCCcCh
Confidence            456678899999999999999999762 45566666555  59999 8899999999999999987        344799


Q ss_pred             ChHHHHHhcCc---hHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHH
Q psy8898         474 TPLHEAAQKGR---TQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHN  550 (1236)
Q Consensus       474 t~L~~A~~~~~---~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~  550 (1236)
                      ||||.|+.++.   ..++.++........             ..    .+...     .+...       ...|.||||+
T Consensus        84 T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~-------------~~----~~~~~-----~~~~~-------~~~G~TpLhl  134 (743)
T TIGR00870        84 TLLHAISLEYVDAVEAILLHLLAAFRKSG-------------PL----ELAND-----QYTSE-------FTPGITALHL  134 (743)
T ss_pred             HHHHHHHhccHHHHHHHHHHHhhcccccC-------------ch----hhhcc-----ccccc-------cCCCCcHHHH
Confidence            99999987332   222333322111100             00    00000     00000       0128999999


Q ss_pred             HHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHH
Q psy8898         551 ACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEA  630 (1236)
Q Consensus       551 A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~  630 (1236)
                      |+..|+.++|++|+++|++++..+....                                +                   
T Consensus       135 Aa~~~~~eiVklLL~~GAdv~~~~~~~~--------------------------------~-------------------  163 (743)
T TIGR00870       135 AAHRQNYEIVKLLLERGASVPARACGDF--------------------------------F-------------------  163 (743)
T ss_pred             HHHhCCHHHHHHHHhCCCCCCcCcCCch--------------------------------h-------------------
Confidence            9999999999999999999875432110                                0                   


Q ss_pred             HHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHH
Q psy8898         631 ARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLH  710 (1236)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~  710 (1236)
                                                                        ..          ...   ......|.||||
T Consensus       164 --------------------------------------------------~~----------~~~---~~~~~~g~tpL~  180 (743)
T TIGR00870       164 --------------------------------------------------VK----------SQG---VDSFYHGESPLN  180 (743)
T ss_pred             --------------------------------------------------hc----------CCC---CCcccccccHHH
Confidence                                                              00          000   000123789999


Q ss_pred             HHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhC---------CHHHHHHHHHCCCCc-------cccCCCC
Q psy8898         711 CAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLG---------HLDVLDTLLRLGAKV-------NLVDVLG  774 (1236)
Q Consensus       711 ~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g---------~~~iv~~Ll~~ga~~-------n~~d~~G  774 (1236)
                      .|+..   ++.+++++|+++|+|+|.+|..|+||||+|+..+         ...+.+++++.++..       +..|.+|
T Consensus       181 ~Aa~~---~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g  257 (743)
T TIGR00870       181 AAACL---GSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQG  257 (743)
T ss_pred             HHHHh---CCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCC
Confidence            99886   7899999999999999999999999999999987         234566676665554       6678999


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCC
Q psy8898         775 QTALHRTARDDKTQAVRVLLSHNA  798 (1236)
Q Consensus       775 ~tpL~~A~~~~~~~iv~~Ll~~ga  798 (1236)
                      .||||+|+..|+.+++++|++.+.
T Consensus       258 ~TPL~~A~~~g~~~l~~lLL~~~~  281 (743)
T TIGR00870       258 LTPLKLAAKEGRIVLFRLKLAIKY  281 (743)
T ss_pred             CCchhhhhhcCCccHHHHHHHHHH
Confidence            999999999999999999998543

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.83  E-value=1.4e-20  Score=237.66  Aligned_cols=183  Identities=19%  Similarity=0.192  Sum_probs=143.2

Q ss_pred             CCCcchhhHHhhcCCHHHHHHHHHC--CCCCCCCCCCCCCHHH-HHHHhCCCceEEeeeccccCccccccccccCCCCCC
Q psy8898          22 DGGLHPLHNACSFGHADVVRLLLEA--DANPNTRDNWNFTPLH-EAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGC   98 (1236)
Q Consensus        22 ~~g~t~L~~A~~~g~~~iv~~Ll~~--ga~~n~~d~~g~t~L~-~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~   98 (1236)
                      .+++++|+.||+.|+.+.|+.+++.  +.++|..|..|+|||| .|+.+++.+++++                       
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~l-----------------------   71 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTEL-----------------------   71 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHH-----------------------
Confidence            3668899999999999999999999  8999999999999999 8999999999987                       


Q ss_pred             CCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCc
Q psy8898          99 PMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQ  178 (1236)
Q Consensus        99 ~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (1236)
                              |+++|+    .+..|.||||.|+.+ ..+.+..++..........                           
T Consensus        72 --------Ll~~g~----~~~~G~T~Lh~A~~~-~~~~v~~ll~~l~~~~~~~---------------------------  111 (743)
T TIGR00870        72 --------LLNLSC----RGAVGDTLLHAISLE-YVDAVEAILLHLLAAFRKS---------------------------  111 (743)
T ss_pred             --------HHhCCC----CCCcChHHHHHHHhc-cHHHHHHHHHHHhhccccc---------------------------
Confidence                    899988    677899999999973 2333333332211000000                           


Q ss_pred             cCCCCCCcccCCCCCCChhhhHHHhcC-cCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCC-------------
Q psy8898         179 YSGSGGDSVSLPPTSPPQPLALETVIM-PSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMD-------------  244 (1236)
Q Consensus       179 ~~~~~~~~~~~~~~~~~l~~~~~~~Ll-~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d-------------  244 (1236)
                                     .+.     .... ....+...|.||||+||.+|+.++|++|+++|++++.++             
T Consensus       112 ---------------~~~-----~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~  171 (743)
T TIGR00870       112 ---------------GPL-----ELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDS  171 (743)
T ss_pred             ---------------Cch-----hhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCc
Confidence                           000     0000 001112259999999999999999999999999998653             


Q ss_pred             -CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccc
Q psy8898         245 -LWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA  287 (1236)
Q Consensus       245 -~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a  287 (1236)
                       ..|.||||.|+..|+.+++++|+++|+|++.+|..|.||||+|
T Consensus       172 ~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A  215 (743)
T TIGR00870       172 FYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLL  215 (743)
T ss_pred             ccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHH
Confidence             3589999999999999999999999999999999888887665

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.83  E-value=2e-20  Score=187.82  Aligned_cols=149  Identities=19%  Similarity=0.173  Sum_probs=130.7

Q ss_pred             cCCCccccCCCCcchhhHHhhcCCH----HHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCcccccc
Q psy8898          13 SGASIHARDDGGLHPLHNACSFGHA----DVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQY   88 (1236)
Q Consensus        13 ~ga~~n~~d~~g~t~L~~A~~~g~~----~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~   88 (1236)
                      +|++++..+.++.++||.||+.|+.    +++++|++.|++++..|..|+||||+|+..|+.++++.             
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~-------------   75 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMK-------------   75 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHH-------------
Confidence            5788888999999999999999998    67778889999999999999999999999999876422             


Q ss_pred             ccccCCCCCCCCCcchhHHHhcCCCCCCccc-CCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCccccccc
Q psy8898          89 VYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ-EGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSC  167 (1236)
Q Consensus        89 ~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (1236)
                                     +++|+++|++++.++. .                                               
T Consensus        76 ---------------i~~Ll~~Gadin~~d~~~-----------------------------------------------   93 (166)
T PHA02743         76 ---------------IELLVNMGADINARELGT-----------------------------------------------   93 (166)
T ss_pred             ---------------HHHHHHcCCCCCCCCCCC-----------------------------------------------
Confidence                           2339999999986642 2                                               


Q ss_pred             CCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHh-cCCCCCCCCCC
Q psy8898         168 GDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIK-AGANVNAMDLW  246 (1236)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~-~ga~~n~~d~~  246 (1236)
                                                                    |.||||+|+..|+.+++++|++ .|++++.+|..
T Consensus        94 ----------------------------------------------g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~  127 (166)
T PHA02743         94 ----------------------------------------------GNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQ  127 (166)
T ss_pred             ----------------------------------------------CCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCC
Confidence                                                          6678888888899999999995 79999999999


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCC
Q psy8898         247 QFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKS  282 (1236)
Q Consensus       247 g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t  282 (1236)
                      |+||||+|+..++.+++++|+++|++++.++..|.+
T Consensus       128 g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~  163 (166)
T PHA02743        128 HETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS  163 (166)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence            999999999999999999999999999998877654

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.83  E-value=8.4e-20  Score=231.11  Aligned_cols=166  Identities=20%  Similarity=0.257  Sum_probs=137.4

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHH-------HHHHHhcCCCCcccCCCCCChhhhhcccCcc
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRA  616 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~  616 (1236)
                      +.++|+.|+..|+.++++.|++.|+++|..|..|+||||+|+       +++|+++|++++.+|.+|.||||.|      
T Consensus       525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A------  598 (823)
T PLN03192        525 MASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNA------  598 (823)
T ss_pred             chhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHH------
Confidence            567899999999999999999999999999999999999887       5688888888888887777776665      


Q ss_pred             cccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCC
Q psy8898         617 VLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV  696 (1236)
Q Consensus       617 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~  696 (1236)
                                                                                     +..|+.++++.|+..+.
T Consensus       599 ---------------------------------------------------------------~~~g~~~iv~~L~~~~~  615 (823)
T PLN03192        599 ---------------------------------------------------------------ISAKHHKIFRILYHFAS  615 (823)
T ss_pred             ---------------------------------------------------------------HHhCCHHHHHHHHhcCc
Confidence                                                                           56677778888776654


Q ss_pred             cccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCC-C
Q psy8898         697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLG-Q  775 (1236)
Q Consensus       697 ~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G-~  775 (1236)
                      ...  ...|.++||.|+..   |+.+++++|+++|+|+|.+|..|+||||+|+..|+.++|++|+++||+++..|..| .
T Consensus       616 ~~~--~~~~~~~L~~Aa~~---g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~  690 (823)
T PLN03192        616 ISD--PHAAGDLLCTAAKR---NDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDF  690 (823)
T ss_pred             ccC--cccCchHHHHHHHh---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCC
Confidence            332  23467888888887   78888888888888888888888888888888888888888888888888888887 8


Q ss_pred             cHHHHHHH
Q psy8898         776 TALHRTAR  783 (1236)
Q Consensus       776 tpL~~A~~  783 (1236)
                      ||++++..
T Consensus       691 t~~~l~~~  698 (823)
T PLN03192        691 SPTELREL  698 (823)
T ss_pred             CHHHHHHH
Confidence            88877644

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.82  E-value=1.9e-19  Score=180.78  Aligned_cols=145  Identities=17%  Similarity=0.161  Sum_probs=125.9

Q ss_pred             ccccccchhhccccHHHHHHHcCCH----HHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCC
Q psy8898         661 LMFMPRIKDEFKGHCLLEACRQGDP----SRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNE  736 (1236)
Q Consensus       661 ~~~~~~~~~~~~~~~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~  736 (1236)
                      ..++++..+..+.++|+.||+.|+.    +++++|++.+......+..|+||||+|+..+..+..+++++|+++|+++|.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            4456667778889999999999998    555667777776666677799999999997333334568999999999999


Q ss_pred             CC-CCCchHHHHHHHhCCHHHHHHHHH-CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q psy8898         737 KN-KELLAPIHLAADLGHLDVLDTLLR-LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSL  805 (1236)
Q Consensus       737 ~d-~~G~T~Lh~A~~~g~~~iv~~Ll~-~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~  805 (1236)
                      +| ..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++++..+.
T Consensus        89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~  159 (166)
T PHA02743         89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLS  159 (166)
T ss_pred             CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccc
Confidence            98 589999999999999999999995 8999999999999999999999999999999999999987653

>KOG0514|consensus

Probab=99.81  E-value=2.4e-20  Score=191.31  Aligned_cols=182  Identities=26%  Similarity=0.270  Sum_probs=146.2

Q ss_pred             HHhhc-CCHHHHHHHH-HCC---CC-----CCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCC
Q psy8898          30 NACSF-GHADVVRLLL-EAD---AN-----PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCP   99 (1236)
Q Consensus        30 ~A~~~-g~~~iv~~Ll-~~g---a~-----~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~   99 (1236)
                      .|+.. .+++.|+-.| ..+   ++     +|..|.+|+||||||+.+++.+||+.                        
T Consensus       231 ~a~~s~a~pe~V~~~l~~f~als~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~------------------------  286 (452)
T KOG0514|consen  231 NSSTSSSDPEQVEDYLAYFEALSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSI------------------------  286 (452)
T ss_pred             hcccCCCCHHHHHHHHHHHHhcChHHHHHHhhhhcCCCCeeeeeeecccchHHHHH------------------------
Confidence            44443 3677776433 332   22     69999999999999999999999988                        


Q ss_pred             CCcchhHHHhcC-CCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCc
Q psy8898         100 MHKDRSCYLAHG-ADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQ  178 (1236)
Q Consensus       100 ~~~~v~~Ll~~g-a~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (1236)
                             |++.| ++++..|..|+||+++|+...-                                             
T Consensus       287 -------LLDSgvC~VD~qNrAGYtpiMLaALA~l---------------------------------------------  314 (452)
T KOG0514|consen  287 -------LLDSGVCDVDQQNRAGYTPVMLAALAKL---------------------------------------------  314 (452)
T ss_pred             -------HhccCcccccccccccccHHHHHHHHhh---------------------------------------------
Confidence                   88887 8999999999999999884210                                             


Q ss_pred             cCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc-----CCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q psy8898         179 YSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA-----LGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHE  253 (1236)
Q Consensus       179 ~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~-----~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~  253 (1236)
                                    .++.+..+|..|+.-| ++|     .|.|+|++|+..|..++|+.|+..|+|||.+|.+|-|+|+.
T Consensus       315 --------------k~~~d~~vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMC  379 (452)
T KOG0514|consen  315 --------------KQPADRTVVERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMC  379 (452)
T ss_pred             --------------cchhhHHHHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhh
Confidence                          0233344444444333 222     59999999999999999999999999999999999999999


Q ss_pred             HHHcCcHHHHHHHHhC-CCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhc
Q psy8898         254 AASKSRLEVCSLLLSE-GADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTS  323 (1236)
Q Consensus       254 A~~~g~~~iv~~Ll~~-ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~  323 (1236)
                      |+++||.|+|++||.. ++|....|.+|-|+                     |.+|...||-+|-..|...
T Consensus       380 A~EHGhkEivklLLA~p~cd~sLtD~DgSTA---------------------l~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  380 AAEHGHKEIVKLLLAVPSCDISLTDVDGSTA---------------------LSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             hhhhChHHHHHHHhccCcccceeecCCCchh---------------------hhhHHhcCchHHHHHHHHH
Confidence            9999999999999977 58998999999888                     6667889999988877754

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.78  E-value=8.1e-19  Score=175.07  Aligned_cols=135  Identities=15%  Similarity=0.182  Sum_probs=111.5

Q ss_pred             ccchhhccccHHHHHHHcCCHHHHHHhhccCC-------cccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCC
Q psy8898         665 PRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV-------VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEK  737 (1236)
Q Consensus       665 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~-------~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~  737 (1236)
                      ++.+|..|.||||+||..|+..  ..+.....       .....+..|+||||+|+..+.....+++++|+++|+++|.+
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~   87 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK   87 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence            4567788999999999999843  22221111       11233556999999999873222236799999999999999


Q ss_pred             C-CCCchHHHHHHHhCCHHHHHHHHH-CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy8898         738 N-KELLAPIHLAADLGHLDVLDTLLR-LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTS  801 (1236)
Q Consensus       738 d-~~G~T~Lh~A~~~g~~~iv~~Ll~-~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~  801 (1236)
                      | ..|+||||+|++.|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++.+
T Consensus        88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            8 499999999999999999999998 499999999999999999999999999999999999875

>PHA02741 hypothetical protein; Provisional

Probab=99.77  E-value=1.6e-18  Score=175.13  Aligned_cols=133  Identities=19%  Similarity=0.213  Sum_probs=117.8

Q ss_pred             ccchhhccccHHHHHHHcCCHHHHHHhhcc------CCcccCCCCCCChHHHHHhhCCCCCh----HHHHHHHHHcCCCC
Q psy8898         665 PRIKDEFKGHCLLEACRQGDPSRVKKFLTS------DVVNFKHPYTGDTPLHCAVTSPYPKR----KAIVESLIRKGAHL  734 (1236)
Q Consensus       665 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~------~~~~~~~~~~g~t~L~~A~~~~~~~~----~~iv~~Ll~~gadi  734 (1236)
                      ++.++..|.|+||.|+..|+.++++.|+..      +......+..|+||||+|+..   ++    .+++++|+++|+++
T Consensus        14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~---g~~~~~~~ii~~Ll~~gadi   90 (169)
T PHA02741         14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEK---HEAQLAAEIIDHLIELGADI   90 (169)
T ss_pred             hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHc---CChHHHHHHHHHHHHcCCCC
Confidence            345778899999999999999999998542      344455566799999999996   55    58999999999999


Q ss_pred             CCCCC-CCchHHHHHHHhCCHHHHHHHHH-CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy8898         735 NEKNK-ELLAPIHLAADLGHLDVLDTLLR-LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADT  800 (1236)
Q Consensus       735 n~~d~-~G~T~Lh~A~~~g~~~iv~~Ll~-~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~  800 (1236)
                      |.++. .|+||||+|+..++.+++++|++ .|++++.+|.+|+||||+|+..++.+++++|++.++..
T Consensus        91 n~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         91 NAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             CCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence            99985 99999999999999999999998 59999999999999999999999999999999987653

>PHA02741 hypothetical protein; Provisional

Probab=99.77  E-value=1.4e-18  Score=175.56  Aligned_cols=140  Identities=20%  Similarity=0.230  Sum_probs=119.6

Q ss_pred             HHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHH------CCCCCCCCCCCCCCHHHHHHHhCCC----ceE
Q psy8898           4 KDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLE------ADANPNTRDNWNFTPLHEAAAKGKT----DVC   73 (1236)
Q Consensus         4 ~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~------~ga~~n~~d~~g~t~L~~A~~~g~~----~iv   73 (1236)
                      ..|++-++      +.+|..|+||||+||+.|+.++|+.|++      .|++++.+|..|+||||+|+..|+.    +++
T Consensus         7 ~~~~~~~~------~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii   80 (169)
T PHA02741          7 MTCLEEMI------AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEII   80 (169)
T ss_pred             HHHHHHHh------hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHH
Confidence            44555554      4578899999999999999999999864      3688999999999999999999995    555


Q ss_pred             EeeeccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCccc-CCCCcchhhcccChHHHHHHHHhcCCCCCCCCC
Q psy8898          74 IGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ-EGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAE  152 (1236)
Q Consensus        74 ~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~  152 (1236)
                      ++                               |+++|++++.++. .                                
T Consensus        81 ~~-------------------------------Ll~~gadin~~~~~~--------------------------------   97 (169)
T PHA02741         81 DH-------------------------------LIELGADINAQEMLE--------------------------------   97 (169)
T ss_pred             HH-------------------------------HHHcCCCCCCCCcCC--------------------------------
Confidence            55                               9999999886542 2                                


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHH
Q psy8898         153 TASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEM  232 (1236)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~  232 (1236)
                                                                                   |+||||+|+..++.+++++
T Consensus        98 -------------------------------------------------------------g~TpLh~A~~~~~~~iv~~  116 (169)
T PHA02741         98 -------------------------------------------------------------GDTALHLAAHRRDHDLAEW  116 (169)
T ss_pred             -------------------------------------------------------------CCCHHHHHHHcCCHHHHHH
Confidence                                                                         6678888888899999999


Q ss_pred             HHh-cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy8898         233 LIK-AGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP  273 (1236)
Q Consensus       233 Ll~-~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~  273 (1236)
                      |++ .|++++..|.+|+||||+|+..++.+++++|++.++..
T Consensus       117 Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741        117 LCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             HHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence            997 59999999999999999999999999999999987654

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.75  E-value=7.6e-18  Score=181.42  Aligned_cols=127  Identities=20%  Similarity=0.211  Sum_probs=107.4

Q ss_pred             ccccCCCCcc-hhhHHhhcCCHHHHHHHHHCCCCCCCCC----CCCCCHHHHHHHhCCCceEEeeeccccCccccccccc
Q psy8898          17 IHARDDGGLH-PLHNACSFGHADVVRLLLEADANPNTRD----NWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYG   91 (1236)
Q Consensus        17 ~n~~d~~g~t-~L~~A~~~g~~~iv~~Ll~~ga~~n~~d----~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~   91 (1236)
                      +-.+|.+|+| +||.|+..|+.++|++|+++||++|.++    ..|.||||+|+..|+.+++++                
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivkl----------------   88 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKL----------------   88 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHH----------------
Confidence            3457777776 5677777799999999999999999874    589999999999999999988                


Q ss_pred             cCCCCCCCCCcchhHHHhcCCCCCCcc-cCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCC
Q psy8898          92 IGGGTGCPMHKDRSCYLAHGADPFLKN-QEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDN  170 (1236)
Q Consensus        92 ~~~~~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (1236)
                                     |+++||+++.++ ..                                                  
T Consensus        89 ---------------LL~~GADVN~~~~~~--------------------------------------------------  103 (300)
T PHA02884         89 ---------------LIRYGADVNRYAEEA--------------------------------------------------  103 (300)
T ss_pred             ---------------HHHcCCCcCcccCCC--------------------------------------------------
Confidence                           999999999643 22                                                  


Q ss_pred             CCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcH
Q psy8898         171 VSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTP  250 (1236)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~Tp  250 (1236)
                                                                 |.||||+|+..|+.+++++|++.|++++.+|..|+||
T Consensus       104 -------------------------------------------g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~Tp  140 (300)
T PHA02884        104 -------------------------------------------KITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTP  140 (300)
T ss_pred             -------------------------------------------CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence                                                       5567888888888899999999999999999999999


Q ss_pred             HHHHHHcCcHHHHHHHH
Q psy8898         251 LHEAASKSRLEVCSLLL  267 (1236)
Q Consensus       251 L~~A~~~g~~~iv~~Ll  267 (1236)
                      ||+|+..++.+++.++.
T Consensus       141 L~~A~~~~~~~~~~~~~  157 (300)
T PHA02884        141 IELALMICNNFLAFMIC  157 (300)
T ss_pred             HHHHHHhCChhHHHHhc
Confidence            99999888888776665

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.74  E-value=2.3e-18  Score=171.80  Aligned_cols=135  Identities=24%  Similarity=0.244  Sum_probs=107.3

Q ss_pred             ccccCCCCcchhhHHhhcCCHHHHHHHHHCCC--C-----CCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccc
Q psy8898          17 IHARDDGGLHPLHNACSFGHADVVRLLLEADA--N-----PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYV   89 (1236)
Q Consensus        17 ~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga--~-----~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~   89 (1236)
                      .+.+|.+|+||||+||+.|+  ++++++..+.  +     ++..|..|.||||+|+..|+.+.++.              
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~--~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~--------------   73 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGG--VTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEK--------------   73 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCC--HHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHH--------------
Confidence            45678899999999999998  4455443332  2     23467889999999999888764321              


Q ss_pred             cccCCCCCCCCCcchhHHHhcCCCCCCccc-CCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccC
Q psy8898          90 YGIGGGTGCPMHKDRSCYLAHGADPFLKNQ-EGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCG  168 (1236)
Q Consensus        90 ~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (1236)
                                    +++|+++|++++.++. .                                                
T Consensus        74 --------------v~~Ll~~gadin~~~~~~------------------------------------------------   91 (154)
T PHA02736         74 --------------LKLLMEWGADINGKERVF------------------------------------------------   91 (154)
T ss_pred             --------------HHHHHHcCCCccccCCCC------------------------------------------------
Confidence                          1338888888876542 2                                                


Q ss_pred             CCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHh-cCCCCCCCCCCC
Q psy8898         169 DNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIK-AGANVNAMDLWQ  247 (1236)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~-~ga~~n~~d~~g  247 (1236)
                                                                   |.||||+|+..|+.+++++|++ .|++++..|..|
T Consensus        92 ---------------------------------------------g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g  126 (154)
T PHA02736         92 ---------------------------------------------GNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAF  126 (154)
T ss_pred             ---------------------------------------------CCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCC
Confidence                                                         6678888888899999999997 499999999999


Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy8898         248 FTPLHEAASKSRLEVCSLLLSEGADPT  274 (1236)
Q Consensus       248 ~TpL~~A~~~g~~~iv~~Ll~~ga~~~  274 (1236)
                      +||||+|+..|+.+++++|+++|++++
T Consensus       127 ~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736        127 KTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            999999999999999999999998865

>KOG0512|consensus

Probab=99.74  E-value=5.8e-18  Score=155.39  Aligned_cols=72  Identities=39%  Similarity=0.448  Sum_probs=45.4

Q ss_pred             hhHHhhcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcchhH
Q psy8898          28 LHNACSFGHADVVRLLLEADAN-PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSC  106 (1236)
Q Consensus        28 L~~A~~~g~~~iv~~Ll~~ga~-~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  106 (1236)
                      +..|+..+.+..|+.||+..|+ +|.+|.+|+||||.|+.+||.+||+.                               
T Consensus        67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~-------------------------------  115 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHE-------------------------------  115 (228)
T ss_pred             HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHH-------------------------------
Confidence            4556666666666666665554 56666666666666666666666655                               


Q ss_pred             HHhcCCCCCCcccCCCCcchhhcc
Q psy8898         107 YLAHGADPFLKNQEGQTPLDLTVA  130 (1236)
Q Consensus       107 Ll~~ga~~~~~~~~g~t~L~~A~~  130 (1236)
                      |+..||+++.+...||||||.||.
T Consensus       116 ll~~gAn~~a~T~~GWTPLhSAck  139 (228)
T KOG0512|consen  116 LLLSGANKEAKTNEGWTPLHSACK  139 (228)
T ss_pred             HHHccCCcccccccCccchhhhhc
Confidence            666666666666666666665553

>KOG0512|consensus

Probab=99.72  E-value=4e-17  Score=149.90  Aligned_cols=136  Identities=41%  Similarity=0.508  Sum_probs=123.3

Q ss_pred             chhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHH
Q psy8898         398 DLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLH  477 (1236)
Q Consensus       398 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~  477 (1236)
                      +....+.+|+..+.+..|+.|++..+..+|.+|.+++  ||||-|+.+|+.+||+.|+..||+++.+.+           
T Consensus        62 dp~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~Y--TpLHRAaYn~h~div~~ll~~gAn~~a~T~-----------  128 (228)
T KOG0512|consen   62 DPIRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEY--TPLHRAAYNGHLDIVHELLLSGANKEAKTN-----------  128 (228)
T ss_pred             CHHHHHHHHHhhccHHHHHHHHHhccccccccccccc--cHHHHHHhcCchHHHHHHHHccCCcccccc-----------
Confidence            4455688999999999999999998999999999986  999999999999999999999999976654           


Q ss_pred             HHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcH
Q psy8898         478 EAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHY  557 (1236)
Q Consensus       478 ~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~  557 (1236)
                                                                                       .||||||-||...+.
T Consensus       129 -----------------------------------------------------------------~GWTPLhSAckWnN~  143 (228)
T KOG0512|consen  129 -----------------------------------------------------------------EGWTPLHSACKWNNF  143 (228)
T ss_pred             -----------------------------------------------------------------cCccchhhhhcccch
Confidence                                                                             288999999999999


Q ss_pred             HHHHHHHhCCCCCccCCCCCCCHHHHHH--------HH-HHHhcCCCCcccCCCCCChhhhhc
Q psy8898         558 EVTEMLVKHGANVNVADLWKFTPLHEAA--------AK-ALLQHGADINLKNTDGKTALDLAV  611 (1236)
Q Consensus       558 ~iv~~Ll~~g~~v~~~d~~g~tpL~~a~--------~~-~Ll~~g~d~~~~~~~g~t~L~~a~  611 (1236)
                      +++.+|+++|+|||.......||||+++        +. +|...+.++..++..+.||+++|-
T Consensus       144 ~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iAR  206 (228)
T KOG0512|consen  144 EVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIAR  206 (228)
T ss_pred             hHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHH
Confidence            9999999999999999999999999998        23 566789999999999999999994

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.71  E-value=1.1e-16  Score=172.47  Aligned_cols=133  Identities=17%  Similarity=0.151  Sum_probs=114.9

Q ss_pred             chhhcccc-HHHHHHHcCCHHHHHHhhccCCcccCC----CCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCC-CCC
Q psy8898         667 IKDEFKGH-CLLEACRQGDPSRVKKFLTSDVVNFKH----PYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEK-NKE  740 (1236)
Q Consensus       667 ~~~~~~~~-~L~~A~~~g~~~~v~~Ll~~~~~~~~~----~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~-d~~  740 (1236)
                      .+|..+.+ +|+.|+..|+.+++++|++.|.+....    +..|.||||+|+..   ++.+++++|+++|+|+|.+ +..
T Consensus        27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~---~~~eivklLL~~GADVN~~~~~~  103 (300)
T PHA02884         27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDC---DNDDAAKLLIRYGADVNRYAEEA  103 (300)
T ss_pred             ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCcCcccCCC
Confidence            45555554 677788889999999999999876654    34699999999987   7899999999999999986 468


Q ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q psy8898         741 LLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSI  802 (1236)
Q Consensus       741 G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~  802 (1236)
                      |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|++.++.+++.++...+.+...
T Consensus       104 g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~~~~~~  165 (300)
T PHA02884        104 KITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDNEISNFY  165 (300)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCcccccc
Confidence            99999999999999999999999999999999999999999999999998777655543333

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.66  E-value=4e-16  Score=139.38  Aligned_cols=88  Identities=38%  Similarity=0.530  Sum_probs=78.5

Q ss_pred             HHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHH
Q psy8898         709 LHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQ  788 (1236)
Q Consensus       709 L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~  788 (1236)
                      ||+|++.   ++.+++++|++.+.+++.    |+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.+|+.+
T Consensus         1 L~~A~~~---~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~   73 (89)
T PF12796_consen    1 LHIAAQN---GNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLE   73 (89)
T ss_dssp             HHHHHHT---TTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHH
T ss_pred             CHHHHHc---CCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHH
Confidence            7888987   889999999999988877    889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCcc
Q psy8898         789 AVRVLLSHNADTSIV  803 (1236)
Q Consensus       789 iv~~Ll~~ga~~~~~  803 (1236)
                      ++++|+++|++++..
T Consensus        74 ~~~~Ll~~g~~~~~~   88 (89)
T PF12796_consen   74 IVKLLLEHGADVNIR   88 (89)
T ss_dssp             HHHHHHHTTT-TTSS
T ss_pred             HHHHHHHcCCCCCCc
Confidence            999999999988764

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0195|consensus

Probab=99.64  E-value=5.4e-16  Score=153.92  Aligned_cols=140  Identities=23%  Similarity=0.274  Sum_probs=121.8

Q ss_pred             ccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCC
Q psy8898         661 LMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKE  740 (1236)
Q Consensus       661 ~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~  740 (1236)
                      .+.+.|..|.-|.+|||+||+.|+..+++.|+..+...+..+-...||||+|+..   ||.++|+.|++..+|+|+.+..
T Consensus        23 tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaah---ghrdivqkll~~kadvnavneh   99 (448)
T KOG0195|consen   23 TEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAH---GHRDIVQKLLSRKADVNAVNEH   99 (448)
T ss_pred             cccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhc---ccHHHHHHHHHHhcccchhhcc
Confidence            3456788889999999999999999999999999988877777778999999998   8999999999999999999999


Q ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q psy8898         741 LLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIV  803 (1236)
Q Consensus       741 G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  803 (1236)
                      |+|||||||..|.-.+.+-|+..||-+++.+++|.|||..|--.-...+.+.--++|-+++..
T Consensus       100 gntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~nri  162 (448)
T KOG0195|consen  100 GNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPNRI  162 (448)
T ss_pred             CCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCCcc
Confidence            999999999999999999999999999999999999999885444444444455677777654

>KOG0195|consensus

Probab=99.62  E-value=4.3e-16  Score=154.65  Aligned_cols=138  Identities=34%  Similarity=0.473  Sum_probs=107.7

Q ss_pred             CCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccC
Q psy8898          14 GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIG   93 (1236)
Q Consensus        14 ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~   93 (1236)
                      .-|.|.-|..|.+|||.||+.||..+|+.|+.+|+.+|..+....||||+|+.+||-+||..                  
T Consensus        24 ehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqk------------------   85 (448)
T KOG0195|consen   24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQK------------------   85 (448)
T ss_pred             ccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHH------------------
Confidence            45677778888888888888888888888888888888888777888888888888888877                  


Q ss_pred             CCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCC
Q psy8898          94 GGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSL  173 (1236)
Q Consensus        94 ~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (1236)
                                   |++..+|+|..|..                                                     
T Consensus        86 -------------ll~~kadvnavneh-----------------------------------------------------   99 (448)
T KOG0195|consen   86 -------------LLSRKADVNAVNEH-----------------------------------------------------   99 (448)
T ss_pred             -------------HHHHhcccchhhcc-----------------------------------------------------
Confidence                         88888888876654                                                     


Q ss_pred             CCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q psy8898         174 PPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHE  253 (1236)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~  253 (1236)
                                                              |+|||||||.-|.-.+.+-|+..|+-++..+++|.|||.-
T Consensus       100 ----------------------------------------gntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldk  139 (448)
T KOG0195|consen  100 ----------------------------------------GNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDK  139 (448)
T ss_pred             ----------------------------------------CCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhh
Confidence                                                    4556777777788889999999999999999999999988


Q ss_pred             HHHcCcHHHHHHHHhCCCCCCC
Q psy8898         254 AASKSRLEVCSLLLSEGADPTL  275 (1236)
Q Consensus       254 A~~~g~~~iv~~Ll~~ga~~~~  275 (1236)
                      |--.-...+.+.--++|-+++.
T Consensus       140 akp~l~~~l~e~aek~gq~~nr  161 (448)
T KOG0195|consen  140 AKPMLKNTLLEIAEKHGQSPNR  161 (448)
T ss_pred             hchHHHHHHHHHHHHhCCCCCc
Confidence            7543333333333456766653

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.60  E-value=3.8e-15  Score=133.06  Aligned_cols=89  Identities=31%  Similarity=0.441  Sum_probs=80.2

Q ss_pred             HHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHH
Q psy8898         676 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLD  755 (1236)
Q Consensus       676 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~  755 (1236)
                      ||.||+.|+.+++++|++.+.....    |+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~   73 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAEN---GNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLE   73 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHT---TTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHc---CCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHH
Confidence            7899999999999999997654333    89999999997   8999999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCccccC
Q psy8898         756 VLDTLLRLGAKVNLVD  771 (1236)
Q Consensus       756 iv~~Ll~~ga~~n~~d  771 (1236)
                      ++++|+++|+++|.+|
T Consensus        74 ~~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   74 IVKLLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHHHHTTT-TTSS-
T ss_pred             HHHHHHHcCCCCCCcC
Confidence            9999999999999875

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG3676|consensus

Probab=99.60  E-value=6.8e-15  Score=168.92  Aligned_cols=90  Identities=24%  Similarity=0.313  Sum_probs=86.9

Q ss_pred             CChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCC--ccccCCCCCcHHHHHH
Q psy8898         705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAK--VNLVDVLGQTALHRTA  782 (1236)
Q Consensus       705 g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~--~n~~d~~G~tpL~~A~  782 (1236)
                      |..||-+||..   ++.+++++|+++|||++.+|..|+|.||..+..-..++-++++++|++  ...+|..|.|||.+|+
T Consensus       240 GEyPLSfAAC~---nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAa  316 (782)
T KOG3676|consen  240 GEYPLSFAACT---NQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAA  316 (782)
T ss_pred             ccCchHHHHHc---CCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHH
Confidence            99999999986   899999999999999999999999999999999999999999999999  8889999999999999


Q ss_pred             HcCCHHHHHHHHhCC
Q psy8898         783 RDDKTQAVRVLLSHN  797 (1236)
Q Consensus       783 ~~~~~~iv~~Ll~~g  797 (1236)
                      +-|+.+|.+.+++..
T Consensus       317 klGk~emf~~ile~~  331 (782)
T KOG3676|consen  317 KLGKKEMFQHILERR  331 (782)
T ss_pred             HhhhHHHHHHHHHhh
Confidence            999999999999984

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.55  E-value=5.6e-14  Score=135.51  Aligned_cols=124  Identities=37%  Similarity=0.478  Sum_probs=116.0

Q ss_pred             hhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHH
Q psy8898         668 KDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHL  747 (1236)
Q Consensus       668 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~  747 (1236)
                      ++..|.|||+.|+..++.+++++|++.+......+..|.||||+|+..   ++.+++++|++.|++++..+..|.||+|+
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~l~~   79 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKN---GHLEIVKLLLEKGADVNARDKDGNTPLHL   79 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence            456789999999999999999999999887666677799999999997   77899999999999999999999999999


Q ss_pred             HHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy8898         748 AADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL  794 (1236)
Q Consensus       748 A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll  794 (1236)
                      |++.++.+++++|++.|.+++..|..|.||+++|...++.+++++|+
T Consensus        80 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          80 AARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            99999999999999999999999999999999999999999999885

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG4214|consensus

Probab=99.52  E-value=4e-14  Score=115.80  Aligned_cols=91  Identities=29%  Similarity=0.435  Sum_probs=54.3

Q ss_pred             HHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHH
Q psy8898         709 LHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQ  788 (1236)
Q Consensus       709 L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~  788 (1236)
                      +++++++   |.++-|+.....|.++|.+= .|+||||||+.+|+++++++|+..||+++.+|+.|-|||-.|+..||.+
T Consensus         6 ~~W~vkN---G~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~   81 (117)
T KOG4214|consen    6 VAWNVKN---GEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD   81 (117)
T ss_pred             Hhhhhcc---CcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence            3444444   55555555555555555443 5566666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHhCCCCCCcc
Q psy8898         789 AVRVLLSHNADTSIV  803 (1236)
Q Consensus       789 iv~~Ll~~ga~~~~~  803 (1236)
                      +|++||+.||+-+..
T Consensus        82 cVklLL~~GAdrt~~   96 (117)
T KOG4214|consen   82 CVKLLLQNGADRTIH   96 (117)
T ss_pred             HHHHHHHcCccccee
Confidence            666666666665554

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.51  E-value=9e-14  Score=134.03  Aligned_cols=125  Identities=47%  Similarity=0.645  Sum_probs=109.1

Q ss_pred             ccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCC
Q psy8898          19 ARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGC   98 (1236)
Q Consensus        19 ~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~   98 (1236)
                      .+|.+|+||||+|+..|+.+++++|++.|++.+..+..|.||||+|+..++.+++++                       
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~-----------------------   58 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKL-----------------------   58 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHH-----------------------
Confidence            456789999999999999999999999999989999999999999999999988887                       


Q ss_pred             CCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCc
Q psy8898          99 PMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQ  178 (1236)
Q Consensus        99 ~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (1236)
                              |+++|++++..+..                                                          
T Consensus        59 --------ll~~~~~~~~~~~~----------------------------------------------------------   72 (126)
T cd00204          59 --------LLEKGADVNARDKD----------------------------------------------------------   72 (126)
T ss_pred             --------HHHcCCCccccCCC----------------------------------------------------------
Confidence                    88888765544332                                                          


Q ss_pred             cCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy8898         179 YSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKS  258 (1236)
Q Consensus       179 ~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g  258 (1236)
                                                         |.||+|+|+..++.+++++|++.|.+++..+..|.|||++|+..+
T Consensus        73 -----------------------------------~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~  117 (126)
T cd00204          73 -----------------------------------GNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNG  117 (126)
T ss_pred             -----------------------------------CCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence                                               456788888888899999999999888989999999999999999


Q ss_pred             cHHHHHHHH
Q psy8898         259 RLEVCSLLL  267 (1236)
Q Consensus       259 ~~~iv~~Ll  267 (1236)
                      +.+++++|+
T Consensus       118 ~~~~~~~Ll  126 (126)
T cd00204         118 HLEVVKLLL  126 (126)
T ss_pred             CHHHHHHhC
Confidence            999998874

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG4214|consensus

Probab=99.50  E-value=4.6e-14  Score=115.46  Aligned_cols=103  Identities=29%  Similarity=0.399  Sum_probs=92.2

Q ss_pred             HHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCH
Q psy8898         675 CLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHL  754 (1236)
Q Consensus       675 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~  754 (1236)
                      -.+++.++|.++-|+.....+ .+.....+|+||||+|+..   |+++++++|+..|++++.+|+.|-|||..|+..||.
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g-~nVn~~~ggR~plhyAAD~---GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~   80 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEG-LNVNEIYGGRTPLHYAADY---GQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHR   80 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHcc-ccHHHHhCCcccchHhhhc---chHHHHHHHHHhccccCCccccCCcHHHHHHHHhhH
Confidence            467889999999999998887 3334445799999999986   899999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCccccCCCCCcHHHHH
Q psy8898         755 DVLDTLLRLGAKVNLVDVLGQTALHRT  781 (1236)
Q Consensus       755 ~iv~~Ll~~ga~~n~~d~~G~tpL~~A  781 (1236)
                      ++|++||+.||+-.....+|.+.+..+
T Consensus        81 ~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   81 DCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHHcCcccceeCCCchhHHhhc
Confidence            999999999999998888998876644

>KOG3676|consensus

Probab=99.48  E-value=7.9e-14  Score=160.28  Aligned_cols=187  Identities=24%  Similarity=0.255  Sum_probs=146.4

Q ss_pred             CCccccCCCCcchhhHHhhc---CCHHHHHHHHHCCCC-CC----CCCCCCCCHHHHHHHhCCCceEEeeeccccCcccc
Q psy8898          15 ASIHARDDGGLHPLHNACSF---GHADVVRLLLEADAN-PN----TRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSN   86 (1236)
Q Consensus        15 a~~n~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~-~n----~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~   86 (1236)
                      .+++.+..-|.|.||.|..+   ++.++++.|++.-.. +|    .-.-.|.||||.|+.+.+.++|++           
T Consensus       134 w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~l-----------  202 (782)
T KOG3676|consen  134 WKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRL-----------  202 (782)
T ss_pred             hccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHH-----------
Confidence            56788888999999999983   456999999986432 12    122459999999999999999988           


Q ss_pred             ccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccc
Q psy8898          87 QYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTS  166 (1236)
Q Consensus        87 ~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (1236)
                                          |++.|||++.+..            |.+      +...                ...   
T Consensus       203 --------------------Ll~~gADV~aRa~------------G~F------F~~~----------------dqk---  225 (782)
T KOG3676|consen  203 --------------------LLAAGADVHARAC------------GAF------FCPD----------------DQK---  225 (782)
T ss_pred             --------------------HHHcCCchhhHhh------------ccc------cCcc----------------ccc---
Confidence                                9999999986532            111      0000                000   


Q ss_pred             cCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCC
Q psy8898         167 CGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLW  246 (1236)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~  246 (1236)
                                     ..+       ++|           +.--...-|..||-+||-.++.|++++|+++|||++.+|..
T Consensus       226 ---------------~~r-------k~T-----------~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~  272 (782)
T KOG3676|consen  226 ---------------ASR-------KST-----------NYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSN  272 (782)
T ss_pred             ---------------ccc-------ccc-----------CCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccC
Confidence                           000       000           00001225899999999999999999999999999999999


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCC--CCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhc
Q psy8898         247 QFTPLHEAASKSRLEVCSLLLSEGAD--PTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTS  323 (1236)
Q Consensus       247 g~TpL~~A~~~g~~~iv~~Ll~~ga~--~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~  323 (1236)
                      |+|.||+.+..-..++.++++++|++  ...+|..|-||                     |..|++-|..++++.+++.
T Consensus       273 GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTP---------------------LtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  273 GNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTP---------------------LTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             CChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCh---------------------HHHHHHhhhHHHHHHHHHh
Confidence            99999999999999999999999999  88888888888                     7778999999999999988

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.47  E-value=4.1e-14  Score=112.10  Aligned_cols=55  Identities=53%  Similarity=0.839  Sum_probs=33.6

Q ss_pred             HhhcC-CCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q psy8898        1063 NVKHG-ANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLV 1117 (1236)
Q Consensus      1063 l~~~~-~~~~~~~~~g~t~lh~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a 1117 (1236)
                      |++.| +++|.+|..|+||||+||..|+.++|++|++.|+|++.+|.+|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            56778 99999999999999999999999999999999999999999999999986

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.41  E-value=2.2e-13  Score=107.89  Aligned_cols=55  Identities=42%  Similarity=0.559  Sum_probs=33.7

Q ss_pred             HHHcC-CCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHH
Q psy8898         727 LIRKG-AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRT  781 (1236)
Q Consensus       727 Ll~~g-adin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A  781 (1236)
                      |+++| +++|.+|..|+||||+||..|+.++|++|++.|++++.+|.+|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            67787 99999999999999999999999999999999999999999999999997

>KOG1710|consensus

Probab=99.36  E-value=2.7e-12  Score=128.14  Aligned_cols=121  Identities=27%  Similarity=0.321  Sum_probs=109.9

Q ss_pred             cccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCC-CCCCCchHHHHHHH
Q psy8898         672 KGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNE-KNKELLAPIHLAAD  750 (1236)
Q Consensus       672 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~-~d~~G~T~Lh~A~~  750 (1236)
                      ..++|..+...|+.+....||.........|.+|.|+|..|+-.   |+++++++|++.|+|+|. ++..++||||+|+.
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAayk---Gnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL   88 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYK---GNLTLVELLLELGADVNDKQHGTLYTPLMFAAL   88 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhc---CcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence            35789999999999999999988665666677799999999976   999999999999999994 57789999999999


Q ss_pred             hCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8898         751 LGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLS  795 (1236)
Q Consensus       751 ~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~  795 (1236)
                      .|+.++.++|++.|+.....|+-|+|+-.+|+.-|+-++|..+-.
T Consensus        89 SGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen   89 SGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINN  133 (396)
T ss_pred             cCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence            999999999999999999999999999999999999999987643

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.35  E-value=1.6e-12  Score=102.72  Aligned_cols=54  Identities=37%  Similarity=0.564  Sum_probs=40.2

Q ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy8898         741 LLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL  794 (1236)
Q Consensus       741 G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll  794 (1236)
                      |+||||+|++.|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            678888888888888888888888888888888888888888888888888875

...

>KOG0515|consensus

Probab=99.35  E-value=2.1e-12  Score=139.17  Aligned_cols=108  Identities=20%  Similarity=0.251  Sum_probs=77.3

Q ss_pred             ChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8898         719 KRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA  798 (1236)
Q Consensus       719 ~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga  798 (1236)
                      |-+++|+..+..--|+...|..|-||||.|+-.||.+||+||++.|++||..|++||||||+|+.+++..+|+.|+++|+
T Consensus       561 GEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~Ga  640 (752)
T KOG0515|consen  561 GELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGA  640 (752)
T ss_pred             chHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccc
Confidence            67777777777767777777788888888888888888888888888888888888888888888888888888888887


Q ss_pred             CCCccc---ccchh--HHHhhhchHHHHHHHHH
Q psy8898         799 DTSIVS---LLVIF--SCSTNLGLKHLLELFER  826 (1236)
Q Consensus       799 ~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~  826 (1236)
                      -+-..+   ..+.+  +.....|+..+...+..
T Consensus       641 avfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  641 AVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             eEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            664432   12211  22345566666666653

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.29  E-value=1.6e-11  Score=132.96  Aligned_cols=128  Identities=30%  Similarity=0.372  Sum_probs=118.8

Q ss_pred             chhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCCh-----HHHHHHHHHcCC---CCCCCC
Q psy8898         667 IKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKR-----KAIVESLIRKGA---HLNEKN  738 (1236)
Q Consensus       667 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~-----~~iv~~Ll~~ga---din~~d  738 (1236)
                      ..+..+.++++.++..+..+.+++++..+......+..|.||||+|+..   ++     .+++++|++.|+   +.+.+|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~---~~~~~~~~~~~~~ll~~g~~~~~~~~~~  144 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALN---GNPPEGNIEVAKLLLEAGADLDVNNLRD  144 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhc---CCcccchHHHHHHHHHcCCCCCCccccC
Confidence            3445578899999999999999999999988888888899999999997   67     999999999999   566779


Q ss_pred             CCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8898         739 KELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN  797 (1236)
Q Consensus       739 ~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~g  797 (1236)
                      ..|+||||+|+..|+.+++++|++.|++++..+..|.||+++|+..++.++++.+++.+
T Consensus       145 ~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         145 EDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999987

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.28  E-value=6.2e-12  Score=99.29  Aligned_cols=54  Identities=39%  Similarity=0.626  Sum_probs=46.8

Q ss_pred             CchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q psy8898         214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLL  267 (1236)
Q Consensus       214 g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll  267 (1236)
                      |+||||+||..|+.+++++|++.|+++|.+|.+|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            789999999999999999999999999999999999999999999999999996

...

>KOG1710|consensus

Probab=99.25  E-value=7.5e-12  Score=125.06  Aligned_cols=108  Identities=29%  Similarity=0.365  Sum_probs=99.1

Q ss_pred             CcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898           2 GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNT-RDNWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      |+.+....|++.--++|.+|+.|+|+|+.|+..|+.+.|++||+.|+|+|. ++..++||||+|+..|+.+|+.+     
T Consensus        23 ndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrl-----   97 (396)
T KOG1710|consen   23 NDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRL-----   97 (396)
T ss_pred             CcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHH-----
Confidence            566777788887566999999999999999999999999999999999984 66789999999999999999988     


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHH
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDA  140 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l  140 (1236)
                                                |++.|+.....|+-|+|+-.+|+.-|+-++|..+
T Consensus        98 --------------------------lldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   98 --------------------------LLDAGARMYLVNSVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             --------------------------HHhccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence                                      9999999999999999999999999999998744

>KOG0515|consensus

Probab=99.23  E-value=1.8e-11  Score=132.13  Aligned_cols=120  Identities=24%  Similarity=0.271  Sum_probs=108.0

Q ss_pred             HHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCH
Q psy8898         675 CLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHL  754 (1236)
Q Consensus       675 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~  754 (1236)
                      .|..|+..|-+|+|+..+..-.+....+..|.|+||-|+..   ||.+||++|++.|+++|..|.+||||||.|+.++++
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCa---ghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv  629 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICA---GHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNV  629 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhc---chhHHHHHHHhcCCcccCccCCCCchhhhhhhcCch
Confidence            46789999999999999999888887778899999999997   999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCccccC-CCCCcHHHHHH--HcCCHHHHHHHHhCC
Q psy8898         755 DVLDTLLRLGAKVNLVD-VLGQTALHRTA--RDDKTQAVRVLLSHN  797 (1236)
Q Consensus       755 ~iv~~Ll~~ga~~n~~d-~~G~tpL~~A~--~~~~~~iv~~Ll~~g  797 (1236)
                      -+++.|++.|+-|-... +++.||..-+-  +.|...|.+||-.-.
T Consensus       630 ~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~vq  675 (752)
T KOG0515|consen  630 PMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGVQ  675 (752)
T ss_pred             HHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHHH
Confidence            99999999999887654 77889988764  568899999997544

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.21  E-value=2.7e-11  Score=131.18  Aligned_cols=113  Identities=40%  Similarity=0.494  Sum_probs=106.5

Q ss_pred             CCcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCC-----HHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHhCCCce
Q psy8898           1 YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGH-----ADVVRLLLEADA---NPNTRDNWNFTPLHEAAAKGKTDV   72 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~-----~~iv~~Ll~~ga---~~n~~d~~g~t~L~~A~~~g~~~i   72 (1236)
                      +|+.+++++|+..|++++.+|.+|.||||+|+..|+     .+++++|++.|+   ..+..|..|.||||+|+..|+.++
T Consensus        83 ~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~  162 (235)
T COG0666          83 KGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADI  162 (235)
T ss_pred             cCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHH
Confidence            467888999999999999999999999999999999     999999999999   566779999999999999999999


Q ss_pred             EEeeeccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcC
Q psy8898          73 CIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQY  144 (1236)
Q Consensus        73 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~  144 (1236)
                      +++                               |++.|++++..+..|.|++++|+..++.+++..+....
T Consensus       163 ~~~-------------------------------ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         163 VEL-------------------------------LLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             HHH-------------------------------HHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            987                               99999999999999999999999999999999998753

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.21  E-value=3.9e-11  Score=147.37  Aligned_cols=94  Identities=27%  Similarity=0.351  Sum_probs=79.4

Q ss_pred             hHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCC
Q psy8898         707 TPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDK  786 (1236)
Q Consensus       707 t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~  786 (1236)
                      +.|+.|+..   |+.++++.|+++|+++|.+|..|+||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..|+
T Consensus        84 ~~L~~aa~~---G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~  160 (664)
T PTZ00322         84 VELCQLAAS---GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGF  160 (664)
T ss_pred             HHHHHHHHc---CCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc
Confidence            457777776   77888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHHHhC-------CCCCCcc
Q psy8898         787 TQAVRVLLSH-------NADTSIV  803 (1236)
Q Consensus       787 ~~iv~~Ll~~-------ga~~~~~  803 (1236)
                      .+++++|+++       |++.+..
T Consensus       161 ~~iv~~Ll~~~~~~~~~ga~~~~~  184 (664)
T PTZ00322        161 REVVQLLSRHSQCHFELGANAKPD  184 (664)
T ss_pred             HHHHHHHHhCCCcccccCCCCCcc
Confidence            8888888888       6665554

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.12  E-value=1.9e-10  Score=141.44  Aligned_cols=106  Identities=25%  Similarity=0.320  Sum_probs=98.8

Q ss_pred             cHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCC
Q psy8898         674 HCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGH  753 (1236)
Q Consensus       674 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~  753 (1236)
                      ..|+.|+..|+.+.++.|++.+......+..|+||||+|+..   ++.+++++|+++|+|+|.+|..|+||||+|+..|+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~---g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~  160 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACAN---GHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGF  160 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHC---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc
Confidence            469999999999999999999988777788899999999997   89999999999999999999999999999999999


Q ss_pred             HHHHHHHHHC-------CCCccccCCCCCcHHHHHH
Q psy8898         754 LDVLDTLLRL-------GAKVNLVDVLGQTALHRTA  782 (1236)
Q Consensus       754 ~~iv~~Ll~~-------ga~~n~~d~~G~tpL~~A~  782 (1236)
                      .+++++|+++       |++++..+..|.+|+..+.
T Consensus       161 ~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        161 REVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            9999999999       8999989998988877654

>cd01438 tankyrase_like Tankyrases interact with the telomere reverse transcriptase complex (TERT)

Probab=98.89  E-value=4.7e-09  Score=105.74  Aligned_cols=112  Identities=70%  Similarity=1.151  Sum_probs=98.0

Q ss_pred             CCCCcceeeccCCChhhhhHHHHHHHHHHhhccCCCCCCccccceeeeehhhchhhHHHHHHHHHHHHhhhcCCcchhhh
Q psy8898         870 SQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERM  949 (1236)
Q Consensus       870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  949 (1236)
                      ...+|.++++...+.++..+.+++++.+..+++.+..++.+.++.+.+++++++..+|+++..+...+...+...     
T Consensus        12 ~~~~~~~~~l~p~~~e~~~v~~~~~~t~~~~~~~~~~~~~~~~~~I~kI~RIQN~~Lw~~y~~kk~~~~~~~~~~-----   86 (223)
T cd01438          12 VNQGTILLDLAPDDKEYQSVEEEMQSTIREHRDGGNAGGIFNRYNIIRIQKVVNKKLRERYCHRQKEIAEENHNH-----   86 (223)
T ss_pred             CCccceEEEecCCCchHHHHHHHHHhhccccccCcccccccccccEEEEEecCCHHHHHHHHHHHHHHHHhhCCC-----
Confidence            456788999999999999999999999999999999999999999999999999999999998876655443332     


Q ss_pred             hccCCchhhhhhhcccchhhHHHHhhhhhhhhcccCccchhhhhccCchHHHHHHhcCcccccccccccccccce
Q psy8898         950 LFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKR 1024 (1236)
Q Consensus       950 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 1024 (1236)
                                                            ..++.|+||+..++.|+..||+..+...++||+.|+|
T Consensus        87 --------------------------------------~ne~~LfHGt~~~~~I~~~GFd~r~~~~g~~fGkGiY  123 (223)
T cd01438          87 --------------------------------------HNERMLFHGSPFINAIIHKGFDERHAYIGGMFGAGIY  123 (223)
T ss_pred             --------------------------------------cceEEEeecCcchhHHHHhCCCccccccCceeeeeee
Confidence                                                  3678889999999999999999888777899999999

Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin repeats that mediate protein-protein interaction (binding TRF1 and insulin-responsive aminopeptidase) and may function as a complex. Overexpression of Tank1 promotes increased telomere length when overexpressed, while overexpressed Tank2 has been shown to promote PARP cleavage- independent cell death (necrosis).

>PF13606 Ank_3: Ankyrin repeat

Probab=98.80  E-value=5.8e-09  Score=69.64  Aligned_cols=30  Identities=50%  Similarity=0.708  Sum_probs=28.4

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q psy8898        1076 WKFTPLHEAAAKGKADIVRLLLQHGADPSK 1105 (1236)
Q Consensus      1076 ~g~t~lh~A~~~~~~~~v~~Ll~~ga~~~~ 1105 (1236)
                      +|+||||+||..|+.++|++||++|+|+|.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            599999999999999999999999999974

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.74  E-value=1.2e-08  Score=70.73  Aligned_cols=33  Identities=52%  Similarity=0.747  Sum_probs=31.2

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q psy8898        1076 WKFTPLHEAAAKGKADIVRLLLQHGADPSKKNR 1108 (1236)
Q Consensus      1076 ~g~t~lh~A~~~~~~~~v~~Ll~~ga~~~~~~~ 1108 (1236)
                      +|+||||+||.+|+.++|++||++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            599999999999999999999999999999874

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF13606 Ank_3: Ankyrin repeat

Probab=98.69  E-value=1.7e-08  Score=67.39  Aligned_cols=30  Identities=43%  Similarity=0.637  Sum_probs=28.5

Q ss_pred             CCcchhhHHhhcCCHHHHHHHHHCCCCCCC
Q psy8898          23 GGLHPLHNACSFGHADVVRLLLEADANPNT   52 (1236)
Q Consensus        23 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~   52 (1236)
                      +|+||||+||++|+.|+|++||++|+|+|.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            589999999999999999999999999984

>KOG0783|consensus

Probab=98.69  E-value=7.3e-09  Score=118.15  Aligned_cols=86  Identities=29%  Similarity=0.373  Sum_probs=78.8

Q ss_pred             CccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhCChhHHHHhhCCCHHHHHHHcCCHHHHHHH
Q psy8898        1070 VNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKL 1149 (1236)
Q Consensus      1070 ~~~~~~~g~t~lh~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~l~g~t~l~~A~~~g~~~~v~~L 1149 (1236)
                      .|..|-.|+|+||+|+..|.-++++.||++|+|++.+|.+                   .|+||||.|+..||++|+-.|
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~E-------------------SG~taLHRaiyyG~idca~lL  105 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEE-------------------SGYTALHRAIYYGNIDCASLL  105 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeecccc-------------------ccchHhhHhhhhchHHHHHHH
Confidence            6789999999999999999999999999999999999987                   477788889999999999999


Q ss_pred             hhcCCCCccCcCCCCCCHHHHHhhcC
Q psy8898        1150 LTADNINCRDAQGRNSTPLHLAAGEK 1175 (1236)
Q Consensus      1150 l~~~~~~~~~~~~~g~t~l~~A~~~~ 1175 (1236)
                      |+++ ..+...|.+|++||++-++-.
T Consensus       106 L~~g-~SL~i~Dkeglsplq~~~r~~  130 (1267)
T KOG0783|consen  106 LSKG-RSLRIKDKEGLSPLQFLSRVL  130 (1267)
T ss_pred             HhcC-CceEEecccCCCHHHHHhhcc
Confidence            9998 667888899999999998744

>KOG0506|consensus

Probab=98.61  E-value=2.9e-08  Score=106.60  Aligned_cols=94  Identities=24%  Similarity=0.196  Sum_probs=84.3

Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhCChhHHHHhhCCCHHHHHHHcCCHHHHHHHhhc
Q psy8898        1073 ADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTA 1152 (1236)
Q Consensus      1073 ~~~~g~t~lh~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~l~g~t~l~~A~~~g~~~~v~~Ll~~ 1152 (1236)
                      ++.++.-++++||+.|++..++.+.-.|.|++.+|.+.+|                    +||.||..|++++|++||+.
T Consensus       502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RT--------------------aLHvAAaEG~v~v~kfl~~~  561 (622)
T KOG0506|consen  502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRT--------------------ALHVAAAEGHVEVVKFLLNA  561 (622)
T ss_pred             ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccch--------------------hheeecccCceeHHHHHHHH
Confidence            3456778999999999999999999999999999998555                    55559999999999999999


Q ss_pred             CCCCccCcCCCCCCHHHHHhhcCChhhHHHHhcC
Q psy8898        1153 DNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLG 1186 (1236)
Q Consensus      1153 ~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~ 1186 (1236)
                      ..++...+|..|+|||+-|.+.+|.+++++|+.-
T Consensus       562 ~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~  595 (622)
T KOG0506|consen  562 CKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEA  595 (622)
T ss_pred             HcCCCChhhccCCCcchHhHhcCcHHHHHHHHHH
Confidence            9999999999999999999999999999999543

>KOG0818|consensus

Probab=98.59  E-value=6.6e-08  Score=104.36  Aligned_cols=73  Identities=32%  Similarity=0.394  Sum_probs=64.9

Q ss_pred             ccccchhHhhcCCCCccCCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH-hCChhHHHHh
Q psy8898        1056 YGTLTPHNVKHGANVNVADLW-KFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVR-EGDQDVSDLL 1128 (1236)
Q Consensus      1056 ~~~~~~~l~~~~~~~~~~~~~-g~t~lh~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~-~~~~~~~~~l 1128 (1236)
                      +....-.||..|+++|..+.+ |.||||+||+.|+.--+++|+-+|||+++.|.+|+||+.+|+ .||.++.+-|
T Consensus       145 nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl  219 (669)
T KOG0818|consen  145 NLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERL  219 (669)
T ss_pred             cHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHH
Confidence            344556688899999998887 999999999999999999999999999999999999999995 5888877765

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.58  E-value=6.5e-08  Score=66.99  Aligned_cols=33  Identities=52%  Similarity=0.792  Sum_probs=31.2

Q ss_pred             CCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCC
Q psy8898          23 GGLHPLHNACSFGHADVVRLLLEADANPNTRDN   55 (1236)
Q Consensus        23 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~   55 (1236)
                      +|+||||+||..|+.++|++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            699999999999999999999999999998874

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0818|consensus

Probab=98.55  E-value=2.2e-07  Score=100.47  Aligned_cols=86  Identities=22%  Similarity=0.254  Sum_probs=75.8

Q ss_pred             HHHHHhhCCCCChHHHHHHHHHcCCCCCCCC-CCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCC
Q psy8898         708 PLHCAVTSPYPKRKAIVESLIRKGAHLNEKN-KELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDK  786 (1236)
Q Consensus       708 ~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d-~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~  786 (1236)
                      -||-.++.   +++++.-.||..||++|..+ ..|.||||.|++.|+.--+++|+=+|||++..|.+|+||+.||-..||
T Consensus       136 QLhasvRt---~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH  212 (669)
T KOG0818|consen  136 QLHSSVRT---GNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGH  212 (669)
T ss_pred             HHHHHhhc---ccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCc
Confidence            37777776   78899999999999999876 468999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhC
Q psy8898         787 TQAVRVLLSH  796 (1236)
Q Consensus       787 ~~iv~~Ll~~  796 (1236)
                      -++..-|++.
T Consensus       213 ~~laeRl~e~  222 (669)
T KOG0818|consen  213 HELAERLVEI  222 (669)
T ss_pred             hHHHHHHHHH
Confidence            8888777654

>KOG0506|consensus

Probab=98.55  E-value=6.9e-08  Score=103.81  Aligned_cols=92  Identities=20%  Similarity=0.249  Sum_probs=85.8

Q ss_pred             CCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHC-CCCccccCCCCCcHHHHHH
Q psy8898         704 TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL-GAKVNLVDVLGQTALHRTA  782 (1236)
Q Consensus       704 ~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~-ga~~n~~d~~G~tpL~~A~  782 (1236)
                      .+..++++|+..   |.+..++.+.-.|.|++.+|.+.+|+||+|+..|+++++++|++. +.+++.+|.+|+|||.-|.
T Consensus       505 ~~~i~~~~aa~~---GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~  581 (622)
T KOG0506|consen  505 DTVINVMYAAKN---GDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK  581 (622)
T ss_pred             cchhhhhhhhhc---CCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence            367789999987   899999999999999999999999999999999999999999985 8899999999999999999


Q ss_pred             HcCCHHHHHHHHhCCC
Q psy8898         783 RDDKTQAVRVLLSHNA  798 (1236)
Q Consensus       783 ~~~~~~iv~~Ll~~ga  798 (1236)
                      .-+|.+++++|-+...
T Consensus       582 ~F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  582 HFKHKEVVKLLEEAQY  597 (622)
T ss_pred             hcCcHHHHHHHHHHhc
Confidence            9999999999988653

>KOG0783|consensus

Probab=98.47  E-value=1.1e-07  Score=108.71  Aligned_cols=97  Identities=23%  Similarity=0.354  Sum_probs=80.7

Q ss_pred             CHHHHHHhhccCCc--ccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCC-CCchHHHHHHHhCCHHHHHHH
Q psy8898         684 DPSRVKKFLTSDVV--NFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNK-ELLAPIHLAADLGHLDVLDTL  760 (1236)
Q Consensus       684 ~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~-~G~T~Lh~A~~~g~~~iv~~L  760 (1236)
                      ...-++-++++..-  ....|.-|+|+||+|+..   +..+++++|+.+|+|++.+|. .|+||||-|+.+|++|++-+|
T Consensus        29 ~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~---~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lL  105 (1267)
T KOG0783|consen   29 EPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSE---NKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLL  105 (1267)
T ss_pred             ChhHHHHHHHHhhhhhhhHHHhhccceeeeeecc---chhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHH
Confidence            33345555555332  222334499999999987   778999999999999999996 699999999999999999999


Q ss_pred             HHCCCCccccCCCCCcHHHHHHH
Q psy8898         761 LRLGAKVNLVDVLGQTALHRTAR  783 (1236)
Q Consensus       761 l~~ga~~n~~d~~G~tpL~~A~~  783 (1236)
                      |.+|+....+|++|..||+.-++
T Consensus       106 L~~g~SL~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  106 LSKGRSLRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             HhcCCceEEecccCCCHHHHHhh
Confidence            99999999999999999998776

>KOG0782|consensus

Probab=98.44  E-value=5.7e-07  Score=98.38  Aligned_cols=119  Identities=19%  Similarity=0.192  Sum_probs=104.5

Q ss_pred             HHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCC--CCCCCCCCchHHHHHHHhCC
Q psy8898         676 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAH--LNEKNKELLAPIHLAADLGH  753 (1236)
Q Consensus       676 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gad--in~~d~~G~T~Lh~A~~~g~  753 (1236)
                      +..|+..+++--++....++......+.+..|.||+|+..   |+-++|+|++.+|..  ++..|..|.|+||-|+-.++
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~t---g~~eivkyildh~p~elld~~de~get~lhkaa~~~~  946 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKT---GNGEIVKYILDHGPSELLDMADETGETALHKAACQRN  946 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhc---CChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence            6677777877667777777777777777789999999997   788999999999865  67788999999999999999


Q ss_pred             HHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8898         754 LDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN  797 (1236)
Q Consensus       754 ~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~g  797 (1236)
                      -.+..+|++.||.+-..|..|.||-..|-+.|..++..||-++.
T Consensus       947 r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~rq  990 (1004)
T KOG0782|consen  947 RAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQ  990 (1004)
T ss_pred             hHHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence            99999999999999999999999999999999999999987654

>KOG0705|consensus

Probab=98.30  E-value=1.6e-06  Score=95.77  Aligned_cols=92  Identities=25%  Similarity=0.302  Sum_probs=78.9

Q ss_pred             HHHHhhCCCCChHHHHHHHHHcCCC--CCC--CCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHc
Q psy8898         709 LHCAVTSPYPKRKAIVESLIRKGAH--LNE--KNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARD  784 (1236)
Q Consensus       709 L~~A~~~~~~~~~~iv~~Ll~~gad--in~--~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~  784 (1236)
                      |..|+..   ..+..+-+|+.+|..  +|.  .+.+|+||||+||+.|++.+.++|+=+|+|+-..|..|+|||.||-+.
T Consensus       628 Ll~A~~~---~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a  704 (749)
T KOG0705|consen  628 LLRAVAA---EDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQA  704 (749)
T ss_pred             HHHHHHH---HHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhc
Confidence            4455554   578888899998754  333  356789999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHhCCCCCCcc
Q psy8898         785 DKTQAVRVLLSHNADTSIV  803 (1236)
Q Consensus       785 ~~~~iv~~Ll~~ga~~~~~  803 (1236)
                      |..|++.+|+.+|......
T Consensus       705 ~sqec~d~llq~gcp~e~~  723 (749)
T KOG0705|consen  705 GSQECIDVLLQYGCPDECG  723 (749)
T ss_pred             ccHHHHHHHHHcCCCcccc
Confidence            9999999999999766554

>KOG0522|consensus

Probab=98.26  E-value=1.8e-06  Score=95.30  Aligned_cols=87  Identities=29%  Similarity=0.502  Sum_probs=71.1

Q ss_pred             HHHHHhhCCCCChHHHHHHHHHc-CCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCC
Q psy8898         708 PLHCAVTSPYPKRKAIVESLIRK-GAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDK  786 (1236)
Q Consensus       708 ~L~~A~~~~~~~~~~iv~~Ll~~-gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~  786 (1236)
                      |||+++..  +..-++.+.|... +..++.+|..|.||||+|+..|+.+.++.|+.+||++..+|+.|++|||.|+..|+
T Consensus        23 ~lh~~~~~--~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~  100 (560)
T KOG0522|consen   23 PLHWAVVT--TDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGN  100 (560)
T ss_pred             ccchhhhc--cchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCC
Confidence            57888773  2334444444433 56688899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhC
Q psy8898         787 TQAVRVLLSH  796 (1236)
Q Consensus       787 ~~iv~~Ll~~  796 (1236)
                      .+++.-++.+
T Consensus       101 ~q~i~~vlr~  110 (560)
T KOG0522|consen  101 EQIITEVLRH  110 (560)
T ss_pred             HHHHHHHHHH
Confidence            9888777655

>KOG2384|consensus

Probab=98.26  E-value=2.4e-06  Score=81.37  Aligned_cols=67  Identities=30%  Similarity=0.378  Sum_probs=56.9

Q ss_pred             CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHhCChhHHHHhhCCCHHHHHHHcCCHHH
Q psy8898        1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHG-ADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGR 1145 (1236)
Q Consensus      1067 ~~~~~~~~~~g~t~lh~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~~~~~~~~~l~g~t~l~~A~~~g~~~~ 1145 (1236)
                      +.++|.+|..||||||.||..|.-++|.+|+++| +.+..+|..|.+++.+                    |-+.|+.+.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaql--------------------aek~g~~~f   61 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQL--------------------AEKGGAQAF   61 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHH--------------------HHhcChHHH
Confidence            5689999999999999999999999999999999 8999999998777777                    555666666


Q ss_pred             HHHHhhcC
Q psy8898        1146 VQKLLTAD 1153 (1236)
Q Consensus      1146 v~~Ll~~~ 1153 (1236)
                      |+.|-+.-
T Consensus        62 vh~lfe~~   69 (223)
T KOG2384|consen   62 VHSLFEND   69 (223)
T ss_pred             HHHHHHHh
Confidence            66666553

>KOG0522|consensus

Probab=98.17  E-value=4.6e-06  Score=92.29  Aligned_cols=60  Identities=35%  Similarity=0.437  Sum_probs=51.9

Q ss_pred             HhhcCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH-HhCCh
Q psy8898        1063 NVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLV-REGDQ 1122 (1236)
Q Consensus      1063 l~~~~~~~~~~~~~g~t~lh~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a-~~~~~ 1122 (1236)
                      +.+.+..++.+|..|+||||+|+.-|+.+.++.|+.+|||+..+|++||||||.| +.|+.
T Consensus        41 ~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   41 LAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             hhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence            3445778899999999999999999999999999999999999999988888873 33443

>KOG0782|consensus

Probab=98.12  E-value=1.9e-06  Score=94.39  Aligned_cols=100  Identities=22%  Similarity=0.301  Sum_probs=92.0

Q ss_pred             cCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHhCCCceEEeeeccccCcccccccc
Q psy8898          13 SGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN--PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVY   90 (1236)
Q Consensus        13 ~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~--~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~   90 (1236)
                      .|-++=.++.+..|.||+|+..|+-|||+|++++|..  ++..|..|.|+||.|+..++-.|+.+               
T Consensus       888 ~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~---------------  952 (1004)
T KOG0782|consen  888 NGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQL---------------  952 (1004)
T ss_pred             cCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHH---------------
Confidence            4777778899999999999999999999999999975  67888999999999999999999988               


Q ss_pred             ccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhc
Q psy8898          91 GIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQ  143 (1236)
Q Consensus        91 ~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~  143 (1236)
                                      |++.||.+...|+.|.||-..|-+.|..++.-+|-..
T Consensus       953 ----------------lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  953 ----------------LVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             ----------------HHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence                            9999999999999999999999999999998877654

>KOG2384|consensus

Probab=98.09  E-value=6.6e-06  Score=78.41  Aligned_cols=70  Identities=20%  Similarity=0.207  Sum_probs=64.5

Q ss_pred             CCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy8898         731 GAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG-AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADT  800 (1236)
Q Consensus       731 gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~g-a~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~  800 (1236)
                      +.++|.+|..|+||||.|+..|+.+.|.||+++| +.|...|..|.+++.+|-+.|+.++++.|.+.-.+.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et   72 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET   72 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence            4689999999999999999999999999999999 899999999999999999999999999999874433

>KOG0705|consensus

Probab=98.03  E-value=1.1e-05  Score=89.29  Aligned_cols=92  Identities=22%  Similarity=0.251  Sum_probs=80.1

Q ss_pred             ccHHHHHHHcCCHHHHHHhhccCC----cccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHH
Q psy8898         673 GHCLLEACRQGDPSRVKKFLTSDV----VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLA  748 (1236)
Q Consensus       673 ~~~L~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A  748 (1236)
                      ..-|..|....++..+..||.++.    .....+.+|+|+||+||..   |++.+.++|+=+|+|+-.+|..|+|||.||
T Consensus       625 gqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~---gnVvl~QLLiWyg~dv~~rda~g~t~l~ya  701 (749)
T KOG0705|consen  625 GQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARK---GNVVLAQLLIWYGVDVMARDAHGRTALFYA  701 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhh---cchhHHHHHHHhCccceecccCCchhhhhH
Confidence            346888888889999999998865    2223344589999999997   899999999999999999999999999999


Q ss_pred             HHhCCHHHHHHHHHCCCCc
Q psy8898         749 ADLGHLDVLDTLLRLGAKV  767 (1236)
Q Consensus       749 ~~~g~~~iv~~Ll~~ga~~  767 (1236)
                      -+.|..+++..|+++|+..
T Consensus       702 r~a~sqec~d~llq~gcp~  720 (749)
T KOG0705|consen  702 RQAGSQECIDVLLQYGCPD  720 (749)
T ss_pred             hhcccHHHHHHHHHcCCCc
Confidence            9999999999999999854

>KOG3609|consensus

Probab=98.03  E-value=8.6e-06  Score=95.79  Aligned_cols=132  Identities=27%  Similarity=0.352  Sum_probs=91.0

Q ss_pred             hhhHHHHHHhCCCHHHHHHHHhhCCC---cccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCCh
Q psy8898         399 LESQLLEASKGGDMTVVTRLLSSCPH---IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTP  475 (1236)
Q Consensus       399 ~~~~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~  475 (1236)
                      .+.....|+..|+.-.|+..++....   .+|+.|.-|+  ++|++|+.+.+.|++++|++++...           ..+
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr--~al~iai~nenle~~eLLl~~~~~~-----------gdA   91 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGR--LALHIAIDNENLELQELLLDTSSEE-----------GDA   91 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhh--hceecccccccHHHHHHHhcCcccc-----------chH
Confidence            34456778888998888888886433   4566666554  8888888888888888888876433           356


Q ss_pred             HHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcC
Q psy8898         476 LHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYG  555 (1236)
Q Consensus       476 L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g  555 (1236)
                      |.+|+..|..++|++++.+......-..                        ..+.+...     +..+.|||++||..+
T Consensus        92 LL~aI~~~~v~~VE~ll~~~~~~~~~~~------------------------~~d~~~~~-----ft~ditPliLAAh~N  142 (822)
T KOG3609|consen   92 LLLAIAVGSVPLVELLLVHFVDAPYLER------------------------SGDANSPH-----FTPDITPLMLAAHLN  142 (822)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccchhcc------------------------ccccCccc-----CCCCccHHHHHHHhc
Confidence            7777777777777776544332211000                        11112221     223889999999999


Q ss_pred             cHHHHHHHHhCCCCCcc
Q psy8898         556 HYEVTEMLVKHGANVNV  572 (1236)
Q Consensus       556 ~~~iv~~Ll~~g~~v~~  572 (1236)
                      ++||+++|+++|+.+..
T Consensus       143 nyEil~~Ll~kg~~i~~  159 (822)
T KOG3609|consen  143 NFEILQCLLTRGHCIPI  159 (822)
T ss_pred             chHHHHHHHHcCCCCCC
Confidence            99999999999988754

>KOG3609|consensus

Probab=97.98  E-value=2.4e-05  Score=92.11  Aligned_cols=121  Identities=21%  Similarity=0.154  Sum_probs=97.9

Q ss_pred             cccHHHHHHHcCCHHHHHHhhccCCc----ccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHH
Q psy8898         672 KGHCLLEACRQGDPSRVKKFLTSDVV----NFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHL  747 (1236)
Q Consensus       672 ~~~~L~~A~~~g~~~~v~~Ll~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~  747 (1236)
                      +..-...||..|+...|+..++....    .+..+.-|+++|++|+.+   .+.+++++|++++..+       ..+|-+
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~n---enle~~eLLl~~~~~~-------gdALL~   94 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDN---ENLELQELLLDTSSEE-------GDALLL   94 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceeccccc---ccHHHHHHHhcCcccc-------chHHHH
Confidence            34467899999999999999988654    122233399999999997   8899999999987665       358999


Q ss_pred             HHHhCCHHHHHHHHHCCCCcc----------ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q psy8898         748 AADLGHLDVLDTLLRLGAKVN----------LVDVLGQTALHRTARDDKTQAVRVLLSHNADTSI  802 (1236)
Q Consensus       748 A~~~g~~~iv~~Ll~~ga~~n----------~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~  802 (1236)
                      |+..|..++|++++.+-....          ..-.-+.|||++|+..+|+||+++||++|+.+..
T Consensus        95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~  159 (822)
T KOG3609|consen   95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI  159 (822)
T ss_pred             HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence            999999999999998743321          1123468999999999999999999999997755

>KOG0511|consensus

Probab=97.91  E-value=1.6e-05  Score=83.58  Aligned_cols=86  Identities=28%  Similarity=0.261  Sum_probs=69.3

Q ss_pred             ChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcC
Q psy8898         706 DTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDD  785 (1236)
Q Consensus       706 ~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~  785 (1236)
                      .--|..||+.   |..+.|++|++.|.++|.+|.....||.+|+.+||.++||+|+++||-...-.-+|..++ |++.+.
T Consensus        37 f~elceacR~---GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~-YgaLnd  112 (516)
T KOG0511|consen   37 FGELCEACRA---GDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH-YGALND  112 (516)
T ss_pred             hHHHHHHhhc---ccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh-hhhhhH
Confidence            4468899987   899999999999999999999999999999999999999999999997765556677664 444433


Q ss_pred             CHHHHHHHHhCC
Q psy8898         786 KTQAVRVLLSHN  797 (1236)
Q Consensus       786 ~~~iv~~Ll~~g  797 (1236)
                        .|=++|+++.
T Consensus       113 --~IR~mllsyd  122 (516)
T KOG0511|consen  113 --RIRRMLLSYD  122 (516)
T ss_pred             --HHHHHHHHHH
Confidence              3445666654

>KOG0521|consensus

Probab=97.88  E-value=9.7e-06  Score=98.94  Aligned_cols=99  Identities=32%  Similarity=0.394  Sum_probs=86.8

Q ss_pred             HHcCCCcccc--CCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCcccccc
Q psy8898          11 LASGASIHAR--DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQY   88 (1236)
Q Consensus        11 l~~ga~~n~~--d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~   88 (1236)
                      ...|+++|..  -..|.|+||.||..|..-++++|+++|+++|..|..|+||||.+...|+...+.+             
T Consensus       641 ~~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~-------------  707 (785)
T KOG0521|consen  641 LAHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACL-------------  707 (785)
T ss_pred             hcchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhh-------------
Confidence            3456666653  3478999999999999999999999999999999999999999999999999988             


Q ss_pred             ccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHH
Q psy8898          89 VYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDA  140 (1236)
Q Consensus        89 ~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l  140 (1236)
                                        |+++|++.+..+.+|++|+++|....+-+++-.+
T Consensus       708 ------------------ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~  741 (785)
T KOG0521|consen  708 ------------------LLKRGADPNAFDPDGKLPLDIAMEAANADIVLLL  741 (785)
T ss_pred             ------------------hccccccccccCccCcchhhHHhhhccccHHHHH
Confidence                              9999999999999999999999776655555433

>KOG0511|consensus

Probab=97.83  E-value=3.6e-05  Score=81.04  Aligned_cols=57  Identities=30%  Similarity=0.397  Sum_probs=28.6

Q ss_pred             HHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCC
Q psy8898         676 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLN  735 (1236)
Q Consensus       676 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin  735 (1236)
                      |..||+.|+.+.|++|++.+...+..+.-..+||.+|+..   ||..+|++|+++||-..
T Consensus        40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLc---GHe~vvklLLenGAiC~   96 (516)
T KOG0511|consen   40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLC---GHEDVVKLLLENGAICS   96 (516)
T ss_pred             HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHc---CcHHHHHHHHHcCCccc
Confidence            4455555555555555554444444444444555555554   45555555555554433

>KOG0521|consensus

Probab=97.81  E-value=1.6e-05  Score=97.10  Aligned_cols=90  Identities=29%  Similarity=0.354  Sum_probs=81.8

Q ss_pred             CCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHH
Q psy8898         704 TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR  783 (1236)
Q Consensus       704 ~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~  783 (1236)
                      .|.|+||.|+..   +..-++++|+.+|+++|..|..|+||||.+...|+...+.+|++.|++.+..|.+|++||++|.+
T Consensus       655 ~~~s~lh~a~~~---~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~  731 (785)
T KOG0521|consen  655 IGCSLLHVAVGT---GDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAME  731 (785)
T ss_pred             cccchhhhhhcc---chHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhh
Confidence            389999999997   78899999999999999999999999999999999999999999999999999999999999988


Q ss_pred             cCCHHHHHHHHhC
Q psy8898         784 DDKTQAVRVLLSH  796 (1236)
Q Consensus       784 ~~~~~iv~~Ll~~  796 (1236)
                      ..+.+++-+|.-.
T Consensus       732 ~~~~d~~~l~~l~  744 (785)
T KOG0521|consen  732 AANADIVLLLRLA  744 (785)
T ss_pred             hccccHHHHHhhh
Confidence            8777777666543

>KOG0520|consensus

Probab=97.28  E-value=0.00019  Score=86.83  Aligned_cols=122  Identities=16%  Similarity=0.109  Sum_probs=83.3

Q ss_pred             ccccHHHHHHHcCCHHHHHHhhcc-CCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHH-cCCCCCCCCCCCchHHHHH
Q psy8898         671 FKGHCLLEACRQGDPSRVKKFLTS-DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIR-KGAHLNEKNKELLAPIHLA  748 (1236)
Q Consensus       671 ~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~-~gadin~~d~~G~T~Lh~A  748 (1236)
                      .|.+.+|.++..++.-+++.+++. +......+.+|.-.+|+++.    ++.+..-+|+. .|..++.+|..|+||||+|
T Consensus       573 r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~----lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wA  648 (975)
T KOG0520|consen  573 RDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAA----LGYEWAFLPISADGVAIDIRDRNGWTPLHWA  648 (975)
T ss_pred             cchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhh----cCCceeEEEEeecccccccccCCCCcccchH
Confidence            466778888888888888887775 44444444445556666544    45556555554 3777778888888888888


Q ss_pred             HHhCCHHHHHHHHHCCCCccc------cCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8898         749 ADLGHLDVLDTLLRLGAKVNL------VDVLGQTALHRTARDDKTQAVRVLLSH  796 (1236)
Q Consensus       749 ~~~g~~~iv~~Ll~~ga~~n~------~d~~G~tpL~~A~~~~~~~iv~~Ll~~  796 (1236)
                      +..|+..++..|++.|++.+.      .+-.|.|+-..|..+|+..+..+|-+.
T Consensus       649 a~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  649 AFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             hhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            888888888888877665432      334577888888888877777777654

>KOG0520|consensus

Probab=97.14  E-value=0.0013  Score=79.92  Aligned_cols=98  Identities=14%  Similarity=0.031  Sum_probs=81.8

Q ss_pred             CccccCCCCcchhhHHhhcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCC
Q psy8898          16 SIHARDDGGLHPLHNACSFGHADVVRLLLEA-DANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGG   94 (1236)
Q Consensus        16 ~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~   94 (1236)
                      ........|+|.||.++..++.-+++.+++- |-.....|.+|.-.+|++ ..++.+.+-+|                  
T Consensus       566 ~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfc-a~lg~ewA~ll------------------  626 (975)
T KOG0520|consen  566 LSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFC-AALGYEWAFLP------------------  626 (975)
T ss_pred             ccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHh-hhcCCceeEEE------------------
Confidence            3445567899999999999999999999995 777788888888899994 45556665553                  


Q ss_pred             CCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcC
Q psy8898          95 GTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQY  144 (1236)
Q Consensus        95 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~  144 (1236)
                                  .+-+|..++++|..|+||||||+..|+..++..++.-.
T Consensus       627 ------------~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lg  664 (975)
T KOG0520|consen  627 ------------ISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELG  664 (975)
T ss_pred             ------------EeecccccccccCCCCcccchHhhcCHHHHHHHHHHhc
Confidence                        55678889999999999999999999999999988654

>KOG2505|consensus

Probab=97.02  E-value=0.00055  Score=75.34  Aligned_cols=61  Identities=33%  Similarity=0.380  Sum_probs=52.1

Q ss_pred             ccchhHhhcCCCCcc------CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q psy8898        1058 TLTPHNVKHGANVNV------ADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVR 1118 (1236)
Q Consensus      1058 ~~~~~l~~~~~~~~~------~~~~g~t~lh~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~ 1118 (1236)
                      ..+++|.+++++.|.      .+..-.|+||+||..|..++|.+||+.|+|+.+.|..|+||.+++.
T Consensus       405 ~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  405 DSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            346677777766643      4556789999999999999999999999999999999999999965

>smart00248 ANK ankyrin repeats

Probab=96.69  E-value=0.0027  Score=41.92  Aligned_cols=29  Identities=48%  Similarity=0.656  Sum_probs=26.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy8898        1076 WKFTPLHEAAAKGKADIVRLLLQHGADPS 1104 (1236)
Q Consensus      1076 ~g~t~lh~A~~~~~~~~v~~Ll~~ga~~~ 1104 (1236)
                      .|+||||+|+..|+.+++++|+++|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            47899999999999999999999998764

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505|consensus

Probab=96.25  E-value=0.0085  Score=66.36  Aligned_cols=65  Identities=22%  Similarity=0.259  Sum_probs=54.7

Q ss_pred             HHHHHHHHhcCCCCCCC------CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchh
Q psy8898         227 FEVTEMLIKAGANVNAM------DLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE  291 (1236)
Q Consensus       227 ~~iv~~Ll~~ga~~n~~------d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  291 (1236)
                      ...|++|.+++++.|..      +.---|+||+|+..|..++|.+||+.|+||...|..|+||.+++...+
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nkd  474 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANKD  474 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccHH
Confidence            56788888888776543      333459999999999999999999999999999999999999886544

>smart00248 ANK ankyrin repeats

Probab=96.20  E-value=0.0067  Score=39.91  Aligned_cols=29  Identities=45%  Similarity=0.665  Sum_probs=26.4

Q ss_pred             CCcchhhHHhhcCCHHHHHHHHHCCCCCC
Q psy8898          23 GGLHPLHNACSFGHADVVRLLLEADANPN   51 (1236)
Q Consensus        23 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n   51 (1236)
                      .|.||||+|+..++.++++.|+++|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            47899999999999999999999988764

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.47  E-value=0.12  Score=51.65  Aligned_cols=113  Identities=16%  Similarity=0.249  Sum_probs=81.3

Q ss_pred             HHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCC----CCCchHHHHHHH
Q psy8898         675 CLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN----KELLAPIHLAAD  750 (1236)
Q Consensus       675 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d----~~G~T~Lh~A~~  750 (1236)
                      .|..|+...+.+.+..+.....+       -.++|.+|+.+   +..+++-+|+.+ .....+|    ..+.--+.|+..
T Consensus       156 sledAV~AsN~~~i~~~VtdKkd-------A~~Am~~si~~---~K~dva~~lls~-f~ft~~dv~~~~~~~ydieY~LS  224 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDKKD-------AHQAMWLSIGN---AKEDVALYLLSK-FNFTKQDVASMEKELYDIEYLLS  224 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcchHH-------HHHHHHHHhcc---cHHHHHHHHHhh-cceecchhhhcCcchhhHHHHHh
Confidence            47788888888887777655322       35788888875   678888888875 2222222    122334555544


Q ss_pred             h--CCHHHHHHHHHCC-CCcccc---CCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8898         751 L--GHLDVLDTLLRLG-AKVNLV---DVLGQTALHRTARDDKTQAVRVLLSHNA  798 (1236)
Q Consensus       751 ~--g~~~iv~~Ll~~g-a~~n~~---d~~G~tpL~~A~~~~~~~iv~~Ll~~ga  798 (1236)
                      .  -+..+++++++.| ++||..   -+.|.|-|.-|++.++.+++.+||++||
T Consensus       225 ~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  225 EHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             hcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            3  3577889999998 577753   5789999999999999999999999998

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=94.92  E-value=0.1  Score=52.05  Aligned_cols=93  Identities=12%  Similarity=0.082  Sum_probs=71.8

Q ss_pred             cccHHHHHHHcCCHHHHHHhhccCC----cccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcC-CCCCCC---CCCCch
Q psy8898         672 KGHCLLEACRQGDPSRVKKFLTSDV----VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKG-AHLNEK---NKELLA  743 (1236)
Q Consensus       672 ~~~~L~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~g-adin~~---d~~G~T  743 (1236)
                      ..++|..+...+..+++.+|+.+-.    +..... .+.--+-++... .+.+..++++++++| +++|.+   -+.|.|
T Consensus       179 A~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~-~~~ydieY~LS~-h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdt  256 (284)
T PF06128_consen  179 AHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASME-KELYDIEYLLSE-HSASYKVLEYFINRGLVDVNKKFQKVNSGDT  256 (284)
T ss_pred             HHHHHHHHhcccHHHHHHHHHhhcceecchhhhcC-cchhhHHHHHhh-cCCcHHHHHHHHhccccccchhhhccCCcch
Confidence            3578999999999999999998732    111111 144456666664 345789999999997 678754   568999


Q ss_pred             HHHHHHHhCCHHHHHHHHHCCCC
Q psy8898         744 PIHLAADLGHLDVLDTLLRLGAK  766 (1236)
Q Consensus       744 ~Lh~A~~~g~~~iv~~Ll~~ga~  766 (1236)
                      -|..|..+++.+++.+||++||-
T Consensus       257 MLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  257 MLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             HHHhHHhcCcHHHHHHHHHcCcc
Confidence            99999999999999999999984

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=88.66  E-value=4.4  Score=39.91  Aligned_cols=136  Identities=15%  Similarity=0.112  Sum_probs=93.5

Q ss_pred             hhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHH
Q psy8898         399 LESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHE  478 (1236)
Q Consensus       399 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~  478 (1236)
                      .+-.+..|++.+.+.++++.-+.-...      -...++.+..||+..+.|+|+|+-+.= .+        .+-.+-+..
T Consensus        46 ~~CLl~HAVk~nmL~ILqkyke~L~~~------~~~~q~LFElAC~~qkydiV~WI~qnL-~i--------~~~~~iFdI  110 (192)
T PF03158_consen   46 MWCLLYHAVKYNMLSILQKYKEDLENE------RYLNQELFELACEEQKYDIVKWIGQNL-HI--------YNPEDIFDI  110 (192)
T ss_pred             HHHHHHHHHHcCcHHHHHHHHHHhhcc------hhHHHHHHHHHHHHccccHHHHHhhcc-CC--------CCchhhhhh
Confidence            445688999999999999886652111      123358889999999999999994431 11        134566778


Q ss_pred             HHhcCchHHHhh----cCCCCCCC-CC-----chhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhH
Q psy8898         479 AAQKGRTQLSAL----LPLSPSAA-ND-----PLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPL  548 (1236)
Q Consensus       479 A~~~~~~~iv~~----L~~~~~~~-~~-----~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L  548 (1236)
                      |......++..+    +....... +.     ...-|..|+..|-++.+...++.++..                ..++|
T Consensus       111 A~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~----------------~~~vl  174 (192)
T PF03158_consen  111 AFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNV----------------DIIVL  174 (192)
T ss_pred             hhhccchhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcc----------------cHHHH
Confidence            888877775332    11221111 11     123477899999999999888876532                23689


Q ss_pred             HHHHhcCcHHHHHHHHh
Q psy8898         549 HNACSYGHYEVTEMLVK  565 (1236)
Q Consensus       549 ~~A~~~g~~~iv~~Ll~  565 (1236)
                      ..|+..++-.++.+++.
T Consensus       175 s~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  175 SQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHhhHHHHHHHhhc
Confidence            99999999999999875

These proteins may be involved in promoting survival of infected macrophages [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=87.92  E-value=5.1  Score=39.51  Aligned_cols=50  Identities=10%  Similarity=0.103  Sum_probs=37.5

Q ss_pred             chHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q psy8898         215 LVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLL  267 (1236)
Q Consensus       215 ~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll  267 (1236)
                      +..|..|++.+.+.+++..-+...+-   -...++-+-.||+..+.|+|+|.=
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~   96 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIG   96 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHh
Confidence            35677899999999988877653321   135567888899999999999983

These proteins may be involved in promoting survival of infected macrophages [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=80.19  E-value=2.7  Score=35.59  Aligned_cols=46  Identities=13%  Similarity=0.281  Sum_probs=25.7

Q ss_pred             HHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8898         744 PIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSH  796 (1236)
Q Consensus       744 ~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~  796 (1236)
                      -+.+|+..|+.|+++.+++.+ .++      ...+..|+..-+.+++++|++.
T Consensus         9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            455666666666666665543 111      2356666666666666666654

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	1236
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		4e-66
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		2e-15
4hki_A	191	Tankyrase 2 In Complex With Flavone Length = 191		3e-40
3kr7_A	240	Human Tankyrase 2 - Catalytic Parp Domain Length =		2e-39
3kr7_A	240	Human Tankyrase 2 - Catalytic Parp Domain Length =		2e-18
3mhk_A	223	Human Tankyrase 2 - Catalytic Parp Domain In Comple		4e-39
3mhk_A	223	Human Tankyrase 2 - Catalytic Parp Domain In Comple		3e-18
4dvi_A	217	Crystal Structure Of Tankyrase 1 With Iwr2 Length =		7e-36
4dvi_A	217	Crystal Structure Of Tankyrase 1 With Iwr2 Length =		3e-19
2rf5_A	258	Crystal Structure Of Human Tankyrase 1- Catalytic P		7e-36
2rf5_A	258	Crystal Structure Of Human Tankyrase 1- Catalytic P		1e-19
3udd_A	224	Tankyrase-1 In Complex With Small Molecule Inhibito		9e-36
3udd_A	224	Tankyrase-1 In Complex With Small Molecule Inhibito		2e-19
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		1e-35
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		1e-27
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		3e-07
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		1e-35
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		1e-30
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		3e-07
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		1e-35
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		1e-27
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		3e-07
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		3e-19
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		4e-16
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		6e-13
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		1e-10
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		6e-08
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		5e-06
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-17
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		8e-09
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		4e-16
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		9e-14
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		5e-08
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		5e-16
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		4e-14
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		2e-09
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		6e-16
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		3e-14
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		2e-09
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		7e-16
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		6e-14
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		8e-09
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		1e-15
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		5e-14
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		8e-07
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		5e-05
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		1e-15
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		2e-09
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		3e-09
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		2e-15
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		8e-08
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		2e-15
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		9e-07
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-15
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-13
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-09
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		3e-15
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		1e-09
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		7e-09
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		3e-04
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-15
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-13
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-08
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		4e-15
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		3e-10
2xee_A	157	Structural Determinants For Improved Thermal Stabil		5e-15
2xee_A	157	Structural Determinants For Improved Thermal Stabil		2e-14
2xee_A	157	Structural Determinants For Improved Thermal Stabil		3e-10
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		5e-15
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		2e-14
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		3e-10
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		5e-15
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-14
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		3e-14
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-08
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		6e-15
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		1e-09
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		1e-08
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		8e-04
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		6e-15
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		7e-08
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		7e-15
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-14
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-06
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-14
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-14
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		4e-08
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		1e-14
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		6e-10
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		9e-08
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		2e-07
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		1e-14
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		1e-08
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		2e-14
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		5e-13
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		1e-07
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		6e-14
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		4e-09
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		1e-13
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		3e-09
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		6e-08
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		3e-13
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		2e-10
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		3e-07
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		1e-06
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		5e-13
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		3e-12
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		2e-06
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-13
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-13
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-09
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		7e-13
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-08
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		3e-12
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		8e-09
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		9e-06
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		5e-04
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		1e-11
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		5e-09
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		3e-06
1uoh_A	226	Human Gankyrin Length = 226		2e-11
1uoh_A	226	Human Gankyrin Length = 226		1e-10
1uoh_A	226	Human Gankyrin Length = 226		9e-08
1uoh_A	226	Human Gankyrin Length = 226		8e-07
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-11
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		1e-10
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		9e-08
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		9e-07
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		2e-11
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		2e-05
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		4e-11
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		3e-09
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		8e-08
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		1e-05
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		5e-11
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		2e-05
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		5e-11
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		2e-10
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		2e-07
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		1e-06
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		1e-10
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		3e-10
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		6e-09
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		3e-10
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		1e-09
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		2e-07
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		8e-07
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		3e-06
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		1e-09
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		5e-07
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		4e-05
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-09
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		3e-09
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		3e-07
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		3e-09
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		3e-07
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		3e-06
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		4e-05
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		4e-09
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		3e-04
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		5e-09
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		3e-04
4hki_C	49	Tankyrase 2 In Complex With Flavone Length = 49		1e-08
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		5e-08
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		9e-08
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		5e-06
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		6e-08
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		1e-07
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		7e-06
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		8e-08
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		2e-05
1ycs_B	239	P53-53bp2 Complex Length = 239		8e-08
1ycs_B	239	P53-53bp2 Complex Length = 239		2e-05
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		2e-07
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		4e-07
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		2e-04
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		4e-07
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		1e-04
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		3e-04
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		4e-07
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		6e-05
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		7e-07
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		7e-07
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		7e-07
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-06
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		3e-04
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		4e-04
2xen_A	91	Structural Determinants For Improved Thermal Stabil		4e-06
2xen_A	91	Structural Determinants For Improved Thermal Stabil		9e-06
2vge_A	229	Crystal Structure Of The C-Terminal Region Of Human		1e-05
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		2e-05
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		7e-05
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		3e-05
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		3e-05
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		3e-05
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		5e-05
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		5e-05
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		5e-05
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		6e-05
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		6e-05
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		6e-05
3goy_A	193	Crystal Structure Of Human Poly(Adp-Ribose) Polymer		6e-05
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		7e-05
3so8_A	162	Crystal Structure Of Ankra Length = 162		8e-05
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		8e-05
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		8e-05
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		8e-05
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		1e-04
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		2e-04
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		2e-04
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		2e-04
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		2e-04
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		4e-04
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		4e-04
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		5e-04
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		6e-04
3blj_A	221	Crystal Structure Of Human Poly(adp-ribose) Polymer		7e-04
4f0e_A	200	Human Adp-Ribosyltransferase 7 (Artd7PARP15), CATAL		8e-04

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score =  250 bits (638), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 146/333 (43%), Positives = 187/333 (56%), Gaps = 79/333 (23%)
Query: 504 ELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAG------------------- 544
           EL EA + G+  K+  L+ P  VN   + GRKSTPLH AAG                   
Sbjct: 27  ELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHA 86
Query: 545 -----LVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAK-------ALLQH 592
                LVPLHNACSYGHYEVTE+L+KHGA VN  DLW+FTPLHEAA+K        LL H
Sbjct: 87  KDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH 146
Query: 593 GADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGW 652
           GAD  L N  GK+A+D+A               EL E                       
Sbjct: 147 GADPTLVNCHGKSAVDMA------------PTPELRE----------------------- 171
Query: 653 CSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCA 712
                        R+  EFKGH LL+A R+ D ++VKK L  +++NFK P + +T LHCA
Sbjct: 172 -------------RLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCA 218
Query: 713 VTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDV 772
           V S +PKRK + E L+RKGA++NEKNK+ + P+H+AA+  H DV++ L + GAK+N +D 
Sbjct: 219 VASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDS 278
Query: 773 LGQTALHRTARDDKTQAVRVLLSHNADTSIVSL 805
           LGQTALHR A     Q  R+LLS+ +D SI+SL
Sbjct: 279 LGQTALHRAALAGHLQTCRLLLSYGSDPSIISL 311

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 4/112 (3%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL--VREGD 1121
            +KHGA VN  DLW+FTPLHEAA+K + ++  LLL HGADP+  N  G + +D+    E  
Sbjct: 111  LKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELR 170
Query: 1122 QDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAG 1173
            + ++   +G+S LL AA++ +L +V+K L  + IN +  Q  + T LH A  
Sbjct: 171  ERLTYEFKGHS-LLQAAREADLAKVKKTLALEIINFKQPQS-HETALHCAVA 220

>pdb|4HKI|A Chain A, Tankyrase 2 In Complex With Flavone Length = 191

Iteration: 1
 Score =  164 bits (415), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/101 (72%), Positives = 86/101 (85%)
Query: 870 SQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWER 929
           S  GT+LIDL  DDKEF +V EEMQ+TVREHRD G +GGIF+RYNI++IQKV N+KLWER
Sbjct: 27  SGSGTILIDLSPDDKEFQSVEEEMQSTVREHRDGGHAGGIFNRYNILKIQKVCNKKLWER 86
Query: 930 YVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHA 970
           Y HRR EV++EN   A+ERMLFHGSPF+NAI+ KGFDERHA
Sbjct: 87  YTHRRKEVSEENHNHANERMLFHGSPFVNAIIHKGFDERHA 127

>pdb|3KR7|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain Length = 240

Iteration: 1
 Score =  161 bits (408), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 86/101 (85%)
Query: 870 SQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWER 929
           S  GT+LIDL  DDKEF +V EEMQ+TVREHRD G +GGIF+RYNI++IQKV N+KLWER
Sbjct: 27  SGSGTILIDLSPDDKEFQSVEEEMQSTVREHRDGGHAGGIFNRYNILKIQKVCNKKLWER 86
Query: 930 YVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHA 970
           Y HRR EV++EN   A+ERMLFHGSPF+NAI+ KGFDERHA
Sbjct: 87  YTHRRKEVSEENHNHANERMLFHGSPFVNAIIHKGFDERHA 127

>pdb|3KR7|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain Length = 240

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 45/53 (84%)
Query: 1176 RHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQ 1228
            R LL CRVTLGKSFLQF+A+KMAH+PPGHHSV GRPS  GL   EYV+YRGEQ
Sbjct: 172  RQLLFCRVTLGKSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQ 224

>pdb|3MHK|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain In Complex With 2-(2- Pyridyl)-7,8-Dihydro-5h-Thiino[4,3-D]pyrimidin-4-Ol Length = 223

Iteration: 1
 Score =  160 bits (405), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 72/98 (73%), Positives = 85/98 (86%)
Query: 873 GTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVH 932
           GT+LIDL  DDKEF +V EEMQ+TVREHRD G +GGIF+RYNI++IQKV N+KLWERY H
Sbjct: 2   GTILIDLSPDDKEFQSVEEEMQSTVREHRDGGHAGGIFNRYNILKIQKVCNKKLWERYTH 61
Query: 933 RRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHA 970
           RR EV++EN   A+ERMLFHGSPF+NAI+ KGFDERHA
Sbjct: 62  RRKEVSEENHNHANERMLFHGSPFVNAIIHKGFDERHA 99

>pdb|3MHK|A Chain A, Human Tankyrase 2 - Catalytic Parp Domain In Complex With 2-(2- Pyridyl)-7,8-Dihydro-5h-Thiino[4,3-D]pyrimidin-4-Ol Length = 223

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 45/53 (84%)
Query: 1176 RHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQ 1228
            R LL CRVTLGKSFLQF+A+KMAH+PPGHHSV GRPS  GL   EYV+YRGEQ
Sbjct: 144  RQLLFCRVTLGKSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQ 196

>pdb|4DVI|A Chain A, Crystal Structure Of Tankyrase 1 With Iwr2 Length = 217

Iteration: 1
 Score =  149 bits (377), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 66/98 (67%), Positives = 83/98 (84%)
Query: 873 GTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVH 932
           GT+L+DL  +DKE+ +V EEMQ+T+REHRD G +GGIF+RYN+IRIQKV N+KL ER+ H
Sbjct: 2   GTILLDLAPEDKEYQSVEEEMQSTIREHRDGGNAGGIFNRYNVIRIQKVVNKKLRERFCH 61
Query: 933 RRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHA 970
           R+ EV++EN    +ERMLFHGSPFINAI+ KGFDERHA
Sbjct: 62  RQKEVSEENHNHHNERMLFHGSPFINAIIHKGFDERHA 99

>pdb|4DVI|A Chain A, Crystal Structure Of Tankyrase 1 With Iwr2 Length = 217

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/53 (75%), Positives = 46/53 (86%)
Query: 1176 RHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQ 1228
            R +L CRVTLGKSFLQF+ +KMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ
Sbjct: 144  RQMLFCRVTLGKSFLQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQ 196

>pdb|2RF5|A Chain A, Crystal Structure Of Human Tankyrase 1- Catalytic Parp Domain Length = 258

Iteration: 1
 Score =  149 bits (377), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 66/98 (67%), Positives = 83/98 (84%)
Query: 873 GTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVH 932
           GT+L+DL  +DKE+ +V EEMQ+T+REHRD G +GGIF+RYN+IRIQKV N+KL ER+ H
Sbjct: 38  GTILLDLAPEDKEYQSVEEEMQSTIREHRDGGNAGGIFNRYNVIRIQKVVNKKLRERFCH 97
Query: 933 RRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHA 970
           R+ EV++EN    +ERMLFHGSPFINAI+ KGFDERHA
Sbjct: 98  RQKEVSEENHNHHNERMLFHGSPFINAIIHKGFDERHA 135

>pdb|2RF5|A Chain A, Crystal Structure Of Human Tankyrase 1- Catalytic Parp Domain Length = 258

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 1176 RHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQ 1228
            R +L CRVTLGKSFLQF+ IKMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ
Sbjct: 180  RQMLFCRVTLGKSFLQFSTIKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQ 232

>pdb|3UDD|A Chain A, Tankyrase-1 In Complex With Small Molecule Inhibitor Length = 224

Iteration: 1
 Score =  149 bits (376), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 66/98 (67%), Positives = 83/98 (84%)
Query: 873 GTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVH 932
           GT+L+DL  +DKE+ +V EEMQ+T+REHRD G +GGIF+RYN+IRIQKV N+KL ER+ H
Sbjct: 2   GTILLDLAPEDKEYQSVEEEMQSTIREHRDGGNAGGIFNRYNVIRIQKVVNKKLRERFCH 61
Query: 933 RRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHA 970
           R+ EV++EN    +ERMLFHGSPFINAI+ KGFDERHA
Sbjct: 62  RQKEVSEENHNHHNERMLFHGSPFINAIIHKGFDERHA 99

>pdb|3UDD|A Chain A, Tankyrase-1 In Complex With Small Molecule Inhibitor Length = 224

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 1176 RHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQ 1228
            R +L CRVTLGKSFLQF+ IKMAHAPPGHHSV+GRPS  GL + EYV+YRGEQ
Sbjct: 144  RQMLFCRVTLGKSFLQFSTIKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQ 196

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score =  149 bits (375), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/157 (55%), Positives = 94/157 (59%), Gaps = 38/157 (24%)
Query: 503 RELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAG------------------ 544
           R+L EA K GD+  VKKL   Q+VN RD  GR+STPLHFAAG                  
Sbjct: 12  RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH 71
Query: 545 ------LVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQ 591
                 LVPLHNACSYGHYEV E+LVKHGA VNVADLWKFTPLHEAAAK        LLQ
Sbjct: 72  AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 131
Query: 592 HGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELL 628
           HGAD   KN DG T LDL       V  GD   ++LL
Sbjct: 132 HGADPTKKNRDGNTPLDL-------VKDGDTDIQDLL 161

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 57/71 (80%), Positives = 65/71 (91%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            VKHGA VNVADLWKFTPLHEAAAKGK +I +LLLQHGADP+KKNRDG TPLDLV++GD D
Sbjct: 97   VKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD 156
Query: 1124 VSDLLRGNSAL 1134
            + DLLRG++AL
Sbjct: 157  IQDLLRGDAAL 167

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 1134 LLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKR 1176
            LL+AAK G++  V+KL T  ++NCRD +GR STPLH AAG  R
Sbjct: 14   LLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNR 56

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score =  149 bits (375), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/157 (55%), Positives = 94/157 (59%), Gaps = 38/157 (24%)
Query: 503 RELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAG------------------ 544
           R+L EA K GD+  VKKL   Q+VN RD  GR+STPLHFAAG                  
Sbjct: 14  RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH 73
Query: 545 ------LVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQ 591
                 LVPLHNACSYGHYEV E+LVKHGA VNVADLWKFTPLHEAAAK        LLQ
Sbjct: 74  AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 133
Query: 592 HGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELL 628
           HGAD   KN DG T LDL       V  GD   ++LL
Sbjct: 134 HGADPTKKNRDGNTPLDL-------VKDGDTDIQDLL 163

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score =  132 bits (333), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/77 (81%), Positives = 71/77 (92%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            VKHGA VNVADLWKFTPLHEAAAKGK +I +LLLQHGADP+KKNRDG TPLDLV++GD D
Sbjct: 99   VKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD 158
Query: 1124 VSDLLRGNSALLDAAKK 1140
            + DLLRG++ALLDAAKK
Sbjct: 159  IQDLLRGDAALLDAAKK 175

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 1134 LLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKR 1176
            LL+AAK G++  V+KL T  ++NCRD +GR STPLH AAG  R
Sbjct: 16   LLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNR 58

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score =  148 bits (374), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/157 (55%), Positives = 94/157 (59%), Gaps = 38/157 (24%)
Query: 503 RELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAG------------------ 544
           R+L EA K GD+  VKKL   Q+VN RD  GR+STPLHFAAG                  
Sbjct: 10  RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH 69
Query: 545 ------LVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQ 591
                 LVPLHNACSYGHYEV E+LVKHGA VNVADLWKFTPLHEAAAK        LLQ
Sbjct: 70  AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129
Query: 592 HGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELL 628
           HGAD   KN DG T LDL       V  GD   ++LL
Sbjct: 130 HGADPTKKNRDGNTPLDL-------VKDGDTDIQDLL 159

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 57/71 (80%), Positives = 65/71 (91%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            VKHGA VNVADLWKFTPLHEAAAKGK +I +LLLQHGADP+KKNRDG TPLDLV++GD D
Sbjct: 95   VKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD 154
Query: 1124 VSDLLRGNSAL 1134
            + DLLRG++AL
Sbjct: 155  IQDLLRGDAAL 165

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 1134 LLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKR 1176
            LL+AAK G++  V+KL T  ++NCRD +GR STPLH AAG  R
Sbjct: 12   LLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNR 54

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 132/318 (41%), Gaps = 51/318 (16%)
Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           G  +V +YLL + A ++A+      PLH A   GH ++V+LLLE +ANPN       TPL
Sbjct: 58  GHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPL 117
Query: 62  HEAAAKGKTDVCIGIYFAEHSS---------------------------KSNQYVYGIGG 94
           H AA +G  +  + +   E S                            + + +    G 
Sbjct: 118 HIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGK 177
Query: 95  GTGCPMH--------KDRSCYLAHGADPFLKNQEGQTPLDLTVAED----VRSLLQDAMA 142
               P+H              L  G  P      G TPL +   ++     RSLL     
Sbjct: 178 NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLL----- 232
Query: 143 QYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPP---TSPPQPLA 199
           QY G+ +      V P    +     + V+L    Q +G+ G+   L P    +    + 
Sbjct: 233 QYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVP 292
Query: 200 LETVIMPSGQAV----ALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAA 255
           +  V++  G  V     +G  PLH A  YG+ ++ + L++  A+VNA     ++PLH+AA
Sbjct: 293 VADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAA 352
Query: 256 SKSRLEVCSLLLSEGADP 273
            +   ++ +LLL  GA P
Sbjct: 353 QQGHTDIVTLLLKNGASP 370

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 166/434 (38%), Gaps = 102/434 (23%)
Query: 215 LVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPT 274
           L PLH A   GH  + + L++ GA+ N  ++   TPLH AA     EV   LL   A   
Sbjct: 15  LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-- 72
Query: 275 LHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTG 334
               ++K+  D  P              HC   A R G  + VK  L ++         G
Sbjct: 73  ---VNAKAKDDQTPL-------------HC---AARIGHTNMVKLLLENNANPNLATTAG 113
Query: 335 DTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPP 394
            TPL     I       E +    E +A+    +      G+T L VA            
Sbjct: 114 HTPLH----IAAREGHVETVLALLEKEAS----QACMTKKGFTPLHVA------------ 153
Query: 395 SVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYL 454
                       +K G + V   LL    H  N    +G   TPLH A  +N + +V+ L
Sbjct: 154 ------------AKYGKVRVAELLLERDAH-PNAAGKNGL--TPLHVAVHHNNLDIVKLL 198
Query: 455 LAHGADVHSKDNATDKW-GFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRE----LFEAC 509
           L  G   HS       W G+TPLH AA++ + +                 +    L  A 
Sbjct: 199 LPRGGSPHSP-----AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAA 253
Query: 510 KGGDLTKVKKLVNPQTVNARDTAGRKS--TPLHFAA------------------------ 543
           + G    V  L++ Q   A    G KS  TPLH  A                        
Sbjct: 254 QEGHAEMVALLLSKQ---ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRM 310
Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQHGADI 596
           G  PLH A  YG+ ++ + L++H A+VN      ++PLH+AA +        LL++GA  
Sbjct: 311 GYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP 370
Query: 597 NLKNTDGKTALDLA 610
           N  ++DG T L +A
Sbjct: 371 NEVSSDGTTPLAIA 384

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 166/435 (38%), Gaps = 86/435 (19%)
Query: 406 ASKGGDMTVVTRLLS--SCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHS 463
           AS  G + +V  LL   + P++ N +       TPLH AA      V +YLL + A V  
Sbjct: 21  ASFMGHLPIVKNLLQRGASPNVSNVKV-----ETPLHMAARAGHTEVAKYLLQNKAKV-- 73
Query: 464 KDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXX----XXXXXXRELFEACKGGDLTKVKK 519
             NA  K   TPLH AA+ G T                       L  A + G +  V  
Sbjct: 74  --NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLA 131
Query: 520 LVNPQTVNARDTAGRKSTPLHFAA------------------------GLVPLHNACSYG 555
           L+  +   A  T  +  TPLH AA                        GL PLH A  + 
Sbjct: 132 LLEKEASQACMTK-KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHN 190
Query: 556 HYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALD 608
           + ++ ++L+  G + +      +TPLH AA       A++LLQ+G   N ++  G T L 
Sbjct: 191 NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLH 250
Query: 609 LAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIK 668
           LA         G  +   LL + +  G             ++G  S    + L+      
Sbjct: 251 LAAQ------EGHAEMVALLLSKQANG-------------NLGNKSGLTPLHLV------ 285
Query: 669 DEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLI 728
                       ++G        +   V+       G TPLH A  S Y   K +V+ L+
Sbjct: 286 -----------AQEGHVPVADVLIKHGVMVDATTRMGYTPLHVA--SHYGNIK-LVKFLL 331
Query: 729 RKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQ 788
           +  A +N K K   +P+H AA  GH D++  LL+ GA  N V   G T L    R     
Sbjct: 332 QHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYIS 391
Query: 789 AVRVLLSHNADTSIV 803
              VL     +TS V
Sbjct: 392 VTDVLKVVTDETSFV 406

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 110/260 (42%), Gaps = 48/260 (18%)
Query: 545 LVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADIN 597
           L PLH A   GH  + + L++ GA+ NV+++   TPLH AA       AK LLQ+ A +N
Sbjct: 15  LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 598 LKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCC 657
            K  D +T L     C                AAR            +G T++       
Sbjct: 75  AKAKDDQTPLH----C----------------AAR------------IGHTNM----VKL 98
Query: 658 KMELMFMPRIKDEFKGHCLLE-ACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSP 716
            +E    P +     GH  L  A R+G    V   L  +         G TPLH A  + 
Sbjct: 99  LLENNANPNLATT-AGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVA--AK 155
Query: 717 YPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQT 776
           Y K + + E L+ + AH N   K  L P+H+A    +LD++  LL  G   +     G T
Sbjct: 156 YGKVR-VAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYT 214
Query: 777 ALHRTARDDKTQAVRVLLSH 796
            LH  A+ ++ +  R LL +
Sbjct: 215 PLHIAAKQNQVEVARSLLQY 234

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLV-REGDQ 1122
            ++H A+VN      ++PLH+AA +G  DIV LLL++GA P++ + DG TPL +  R G  
Sbjct: 331  LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYI 390
Query: 1123 DVSDLLR 1129
             V+D+L+
Sbjct: 391  SVTDVLK 397

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 58/124 (46%), Gaps = 17/124 (13%)
Query: 1078 FTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL-------- 1128
            FTPLH AA  GK  +  LLL+  A P+   ++G TPL + V   + D+  LL        
Sbjct: 147  FTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH 206
Query: 1129 ----RGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAAGEKRHLLMCRV 1183
                 G + L  AAK+  +   + LL    + N    QG   TPLHLAA E  H  M  +
Sbjct: 207  SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQG--VTPLHLAAQEG-HAEMVAL 263
Query: 1184 TLGK 1187
             L K
Sbjct: 264  LLSK 267

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +      H   G TPLH A    +P+   IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPE---IVEVLLKHGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N ++ +   P+HLAAD GHL++++ LL+ GA VN  D  G T LH  A     + V V
Sbjct: 72  DVNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL H AD +         F  S + G + L E+ ++
Sbjct: 132 LLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 65/123 (52%), Gaps = 24/123 (19%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            + +GA+VN  D    TPLH AA  G  +IV +LL+HGAD + ++ DG TPL L       
Sbjct: 34   MANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHL------- 86
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
                         AA  G+L  V+ LL    ++N +DA G   TPLHLAA ++ HL +  
Sbjct: 87   -------------AADNGHLEIVEVLLKYGADVNAQDAYGL--TPLHLAA-DRGHLEIVE 130
Query: 1183 VTL 1185
            V L
Sbjct: 131  VLL 133

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 34/141 (24%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAA------------------ 543
           ++L EA + G   +V+ L+ N   VNA D +G+  TPLH AA                  
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNAEDDSGK--TPLHLAAIKGHLEIVEVLLKHGADV 73
Query: 544 ------GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALL 590
                 G  PLH A  YGH E+ E+L+K+GA+VN  D + FTPLH AA        + LL
Sbjct: 74  NAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLL 133
Query: 591 QHGADINLKNTDGKTALDLAV 611
           ++GAD+N ++  GKTA D+++
Sbjct: 134 KYGADVNAQDKFGKTAFDISI 154

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 76.6 bits (187), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +         +G TPLH A    + +   IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLE---IVEVLLKHGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +K    P+HLAA  GHL++++ LL+ GA VN  D  G T LH  A     + V V
Sbjct: 72  DVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL + AD +         F  S + G + L E+ ++
Sbjct: 132 LLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K+GA+VN  D + FTPLH AA  G  +IV +LL++GAD + +++ G T  D+ +  G++
Sbjct: 100  LKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNE 159
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 160  DLAEILQ 166

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 84.0 bits (206), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 73/141 (51%), Gaps = 34/141 (24%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAA------------------ 543
           ++L EA + G   +V+ L+ N   VNA D +G   TPLH AA                  
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNATDASGL--TPLHLAATYGHLEIVEVLLKHGADV 73
Query: 544 ------GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALL 590
                 G  PLH A   GH E+ E+L+KHGA+VN  D W  TPLH AA        + LL
Sbjct: 74  NAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLL 133
Query: 591 QHGADINLKNTDGKTALDLAV 611
           +HGAD+N ++  GKTA D+++
Sbjct: 134 KHGADVNAQDKFGKTAFDISI 154

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 77.8 bits (190), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +         +G TPLH A T  + +   IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLE---IVEVLLKHGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +     P+HLAA +GHL++++ LL+ GA VN VD  G T LH  A     + V V
Sbjct: 72  DVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL H AD +         F  S + G + L E+ ++
Sbjct: 132 LLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +KHGA+VN  D W  TPLH AA  G  +IV +LL+HGAD + +++ G T  D+ +  G++
Sbjct: 100  LKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 160  DLAEILQ 166

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 84.0 bits (206), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 73/141 (51%), Gaps = 34/141 (24%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAA------------------ 543
           ++L EA + G   +V+ L+ N   VNA D +G   TPLH AA                  
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNATDASGL--TPLHLAATYGHLEIVEVLLKHGADV 73
Query: 544 ------GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALL 590
                 G  PLH A   GH E+ E+L+KHGA+VN  D W  TPLH AA        + LL
Sbjct: 74  NAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLL 133
Query: 591 QHGADINLKNTDGKTALDLAV 611
           +HGAD+N ++  GKTA D+++
Sbjct: 134 KHGADVNAQDKFGKTAFDISI 154

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +         +G TPLH A T  + +   IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLE---IVEVLLKHGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +     P+HLAA +GHL++++ LL+ GA VN VD  G T LH  A     + V V
Sbjct: 72  DVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL H AD +         F  S + G + L E+ ++
Sbjct: 132 LLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +KHGA+VN  D W  TPLH AA  G  +IV +LL+HGAD + +++ G T  D+ +  G++
Sbjct: 100  LKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 160  DLAEILQ 166

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 83.6 bits (205), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 80/168 (47%), Gaps = 50/168 (29%)
Query: 451 VEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACK 510
           V  L+A+GADV    NATD  G+TPLH AA  G                    E+ E   
Sbjct: 30  VRILMANGADV----NATDNDGYTPLHLAASNGHL------------------EIVEVL- 66
Query: 511 GGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANV 570
                    L N   VNA D             G+ PLH A + GH E+ E+L+KHGA+V
Sbjct: 67  ---------LKNGADVNASDL-----------TGITPLHLAAATGHLEIVEVLLKHGADV 106
Query: 571 NVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           N  D    TPLH AA        + LL+HGAD+N ++  GKTA D+++
Sbjct: 107 NAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFGKTAFDISI 154

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +          G TPLH A ++ + +   IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLE---IVEVLLKNGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +   + P+HLAA  GHL++++ LL+ GA VN  D  G T LH  A+    + V V
Sbjct: 72  DVNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFE 825
           LL H AD +         F  S + G + L E+ +
Sbjct: 132 LLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 21/113 (18%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +K+GA+VN +DL   TPLH AAA G  +IV +LL+HGAD +  + DG TPL L       
Sbjct: 67   LKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHL------- 119
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAAGEK 1175
                         AAK G+L  V+ LL    ++N +D  G+ +  + +  G +
Sbjct: 120  -------------AAKYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 159

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 81/168 (48%), Gaps = 50/168 (29%)
Query: 451 VEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACK 510
           V  L+A+GADV    NATD  G TPLH AA  G+                   E+ E   
Sbjct: 22  VRILMANGADV----NATDDNGLTPLHLAAANGQL------------------EIVEVL- 58
Query: 511 GGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANV 570
                    L N   VNA D+AG           + PLH A   GH E+ E+L+KHGA+V
Sbjct: 59  ---------LKNGADVNASDSAG-----------ITPLHLAAYDGHLEIVEVLLKHGADV 98
Query: 571 NVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           N  D   +TPLH AA        + LL+HGAD+N ++  G TA D+++
Sbjct: 99  NAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISI 146

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA   G    V+  + +          G TPLH A  +   +   IVE L++ GA
Sbjct: 7   GKKLLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLE---IVEVLLKNGA 63
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +   + P+HLAA  GHL++++ LL+ GA VN  D  G T LH  A   + + V V
Sbjct: 64  DVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEV 123
Query: 793 LLSHNADTSIVSL--LVIFSCSTNLGLKHLLELFE 825
           LL H AD +      L  F  S N G + L E+ +
Sbjct: 124 LLKHGADVNAQDALGLTAFDISINQGQEDLAEILQ 158

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 21/113 (18%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +K+GA+VN +D    TPLH AA  G  +IV +LL+HGAD +  +R G TPL L       
Sbjct: 59   LKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHL------- 111
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAAGEK 1175
                         AA  G L  V+ LL    ++N +DA G  +  + +  G++
Sbjct: 112  -------------AALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQE 151

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 68/150 (45%), Gaps = 29/150 (19%)
Query: 1081 LHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKK 1140
            L EAAA G+ D VR+L+ +GAD +  + +G TPL L                    AA  
Sbjct: 10   LLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHL--------------------AAAN 49
Query: 1141 GNLGRVQKLL-TADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKMAH 1199
            G L  V+ LL    ++N  D+ G   TPLHLAA +  HL +  V L K     NA   A 
Sbjct: 50   GQLEIVEVLLKNGADVNASDSAGI--TPLHLAAYDG-HLEIVEVLL-KHGADVNAYDRAG 105
Query: 1200 APPGHHSVMGRPSSGGLYFPEYVVYRGEQV 1229
              P H + +    SG L   E ++  G  V
Sbjct: 106  WTPLHLAAL----SGQLEIVEVLLKHGADV 131

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 19/117 (16%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
           ++L EA + G   +V+ L+ N   VNA D AG           + PLH A   GH E+ E
Sbjct: 16  KKLLEATRAGQDDEVRILMANGADVNAMDDAG-----------VTPLHLAAKRGHLEIVE 64
Query: 562 MLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           +L+KHGA+VN +D+W  TPLH AA        + LL++GAD+N ++  GKTA D+++
Sbjct: 65  VLLKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISI 121

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +          G TPLH A    + +   IVE L++ GA
Sbjct: 15  GKKLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLE---IVEVLLKHGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTAL 778
            +N  +     P+HLAA +GHL++++ LL  GA VN  D  G+TA 
Sbjct: 72  DVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAF 117

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +KHGA+VN +D+W  TPLH AA  G  +IV +LL++GAD + +++ G T  D+ +  G++
Sbjct: 67   LKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNE 126
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 127  DLAEILQ 133

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +      + + G TPLH  V + + +   I+E L++  A
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLE---IIEVLLKYAA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +K    P+HLAA  GHL++++ LL+ GA VN +D  G T LH  A D   + V V
Sbjct: 72  DVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL + AD +         F  S + G + L E+ ++
Sbjct: 132 LLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 24/123 (19%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            + +GA+VN  D +  TPLH     G  +I+ +LL++ AD +  ++ G TPL L       
Sbjct: 34   MANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHL------- 86
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
                         AA +G+L  V+ LL    ++N  D QG   TPLHLAA E  HL +  
Sbjct: 87   -------------AAYRGHLEIVEVLLKYGADVNAMDYQGY--TPLHLAA-EDGHLEIVE 130
Query: 1183 VTL 1185
            V L
Sbjct: 131  VLL 133

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +      + + G TPLH A    + +   IVE L+R GA
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLE---IVEVLLRNGA 59
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +     P+HLAA LGHL++++ LL+ GA VN  D  G T L+  A     + V V
Sbjct: 60  DVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEV 119
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFE 825
           LL H AD +         F  S ++G + L E+ +
Sbjct: 120 LLKHGADVNAQDKFGKTAFDISIDIGNEDLAEILQ 154

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 23/110 (20%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            + +GA+ N  D +  TPLH AAA G  +IV +LL++GAD +  + +G TPL L       
Sbjct: 22   MANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHL------- 74
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAA 1172
                         AA  G+L  V+ LL    ++N +DA G   TPL+LAA
Sbjct: 75   -------------AASLGHLEIVEVLLKYGADVNAKDATG--ITPLYLAA 109

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 43/168 (25%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAA------------------ 543
           + L EA + G+  +VK L+ N   VNA D+ GR  TPLH+AA                  
Sbjct: 6   KRLIEAAENGNKDRVKDLIENGADVNASDSDGR--TPLHYAAKEGHKEIVKLLISKGADV 63
Query: 544 ------GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALL 590
                 G  PLH A   GH E+ ++L+  GA+VN  D    TPLH AA        K L+
Sbjct: 64  NAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLI 123
Query: 591 QHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGL 638
             GAD+N  ++DG+T LDLA          +H  EE+++     GG L
Sbjct: 124 SKGADVNTSDSDGRTPLDLAR---------EHGNEEIVKLLEKQGGWL 162

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  L+EA   G+  RVK  + +          G TPLH A    +   K IV+ LI KGA
Sbjct: 5   GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGH---KEIVKLLISKGA 61
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N K+ +   P+H AA  GH +++  L+  GA VN  D  G+T LH  A++   + V++
Sbjct: 62  DVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKL 121
Query: 793 LLSHNAD--TSIVSLLVIFSCSTNLGLKHLLELFERE 827
           L+S  AD  TS          +   G + +++L E++
Sbjct: 122 LISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQ 158

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 23/112 (20%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +++GA+VN +D    TPLH AA +G  +IV+LL+  GAD + K+ DG TPL    +EG +
Sbjct: 24   IENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHK 83
Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGE 1174
            ++  LL    A                    ++N +D+ GR  TPLH AA E
Sbjct: 84   EIVKLLISKGA--------------------DVNAKDSDGR--TPLHYAAKE 113

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 19/117 (16%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
           ++L EA + G   +V+ L+ N   VNA D AG   TPLH AA           GH E+ E
Sbjct: 16  KKLLEATRAGQDDEVRILMANGADVNAMDDAG--VTPLHLAA---------KRGHLEIVE 64
Query: 562 MLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           +L+KHGA+VN  D+W  TPLH AA        + LL++GAD+N ++  GKTA D+++
Sbjct: 65  VLLKHGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISI 121

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +          G TPLH A    + +   IVE L++ GA
Sbjct: 15  GKKLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLE---IVEVLLKHGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTAL 778
            +N ++     P+HLAA +GHL++++ LL  GA VN  D  G+TA 
Sbjct: 72  DVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAF 117

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +KHGA+VN  D+W  TPLH AA  G  +IV +LL++GAD + +++ G T  D+ +  G++
Sbjct: 67   LKHGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNE 126
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 127  DLAEILQ 133

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 26/114 (22%)
Query: 1073 ADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNS 1132
            +DL K   L EA   G+ D VR+L+ +GAD +  +  G TPL L                
Sbjct: 12   SDLGK--KLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHL---------------- 53
Query: 1133 ALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTL 1185
                AAK+G+L  V+ LL    ++N RD  GR  TPLHLAA    HL +  V L
Sbjct: 54   ----AAKRGHLEIVEVLLKHGADVNARDIWGR--TPLHLAA-TVGHLEIVEVLL 100

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 80/168 (47%), Gaps = 43/168 (25%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAA------------------ 543
           + L EA + G+  +VK L+ N   VNA D+ GR  TPLH AA                  
Sbjct: 6   KRLIEAAENGNKDRVKDLIENGADVNASDSDGR--TPLHHAAENGHKEVVKLLISKGADV 63
Query: 544 ------GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALL 590
                 G  PLH+A   GH EV ++L+  GA+VN  D    TPLH AA        K L+
Sbjct: 64  NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI 123
Query: 591 QHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGL 638
             GAD+N  ++DG+T LDLA          +H  EE+++     GG L
Sbjct: 124 SKGADVNTSDSDGRTPLDLAR---------EHGNEEVVKLLEKQGGWL 162

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  L+EA   G+  RVK  + +          G TPLH A  + +   K +V+ LI KGA
Sbjct: 5   GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGH---KEVVKLLISKGA 61
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N K+ +   P+H AA+ GH +V+  L+  GA VN  D  G+T LH  A +   + V++
Sbjct: 62  DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKL 121
Query: 793 LLSHNAD--TSIVSLLVIFSCSTNLGLKHLLELFERE 827
           L+S  AD  TS          +   G + +++L E++
Sbjct: 122 LISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ 158

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVRE-GDQ 1122
            +  GA+VN  D    TPLH AA  G  ++V+LL+  GAD +  + DG TPLDL RE G++
Sbjct: 90   ISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNE 149
Query: 1123 DVSDLLRGNSALLD 1136
            +V  LL      L+
Sbjct: 150  EVVKLLEKQGGWLE 163

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKG 731
           G  LLEA R G    V+  + +   VN K    G TPLH A    + +   IVE L++ G
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAKDK-DGYTPLHLAAREGHLE---IVEVLLKAG 70
Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           A +N K+K+   P+HLAA  GHL++++ LL+ GA VN  D  G T LH  AR+   + V 
Sbjct: 71  ADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVE 130
Query: 792 VLLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFE 825
           VLL   AD +         F  S + G + L E+ +
Sbjct: 131 VLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 24/121 (19%)
Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVS 1125
            +GA+VN  D   +TPLH AA +G  +IV +LL+ GAD + K++DG TPL L         
Sbjct: 36   NGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHL--------- 86
Query: 1126 DLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCRVT 1184
                       AA++G+L  V+ LL A  ++N +D  G   TPLHLAA E  HL +  V 
Sbjct: 87   -----------AAREGHLEIVEVLLKAGADVNAKDKDG--YTPLHLAAREG-HLEIVEVL 132
Query: 1185 L 1185
            L
Sbjct: 133  L 133

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 80.9 bits (198), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 86/184 (46%), Gaps = 46/184 (25%)
Query: 398 DLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH 457
           DL  +LLEA++ G    V R+L +    VN +D DG   TPLH AA    + +VE LL  
Sbjct: 1   DLGKKLLEAARAGQDDEV-RILMANGADVNAKDKDG--YTPLHLAAREGHLEIVEVLLKA 57
Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACKGGDLTKV 517
           GADV    NA DK G+TPLH AA++G                    E+ E          
Sbjct: 58  GADV----NAKDKDGYTPLHLAAREGHL------------------EIVEVL-------- 87
Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK 577
             L     VNA+D  G   TPLH AA           GH E+ E+L+K GA+VN  D + 
Sbjct: 88  --LKAGADVNAKDKDG--YTPLHLAA---------REGHLEIVEVLLKAGADVNAQDKFG 134
Query: 578 FTPL 581
            TP 
Sbjct: 135 KTPF 138

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKG 731
           G  LLEA R G    V+  + +   VN K    G TPLH A    + +   IVE L++ G
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGADVNAKDK-DGYTPLHLAAREGHLE---IVEVLLKAG 58
Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           A +N K+K+   P+HLAA  GHL++++ LL+ GA VN  D  G T LH  AR+   + V 
Sbjct: 59  ADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVE 118
Query: 792 VLLSHNADTS 801
           VLL   AD +
Sbjct: 119 VLLKAGADVN 128

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 24/121 (19%)
Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVS 1125
            +GA+VN  D   +TPLH AA +G  +IV +LL+ GAD + K++DG TPL L         
Sbjct: 24   NGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHL--------- 74
Query: 1126 DLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCRVT 1184
                       AA++G+L  V+ LL A  ++N +D  G   TPLHLAA E  HL +  V 
Sbjct: 75   -----------AAREGHLEIVEVLLKAGADVNAKDKDG--YTPLHLAAREG-HLEIVEVL 120
Query: 1185 L 1185
            L
Sbjct: 121  L 121

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 80.5 bits (197), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 86/184 (46%), Gaps = 46/184 (25%)
Query: 398 DLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH 457
           DL  +LLEA++ G    V R+L +    VN +D DG   TPLH AA    + +VE LL  
Sbjct: 1   DLGKKLLEAARAGQDDEV-RILMANGADVNAKDKDG--YTPLHLAAREGHLEIVEVLLKA 57
Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACKGGDLTKV 517
           GADV    NA DK G+TPLH AA++G                    E+ E          
Sbjct: 58  GADV----NAKDKDGYTPLHLAAREGHL------------------EIVEVL-------- 87
Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK 577
             L     VNA+D  G   TPLH AA           GH E+ E+L+K GA+VN  D + 
Sbjct: 88  --LKAGADVNAKDKDG--YTPLHLAA---------REGHLEIVEVLLKAGADVNAQDKFG 134
Query: 578 FTPL 581
            TP 
Sbjct: 135 KTPF 138

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKG 731
           G  LLEA R G    V+  + +   VN K    G TPLH A    + +   IVE L++ G
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGADVNAKDK-DGYTPLHLAAREGHLE---IVEVLLKAG 58
Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           A +N K+K+   P+HLAA  GHL++++ LL+ GA VN  D  G T LH  AR+   + V 
Sbjct: 59  ADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVE 118
Query: 792 VLLSHNADTS 801
           VLL   AD +
Sbjct: 119 VLLKAGADVN 128

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 24/121 (19%)
Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVS 1125
            +GA+VN  D   +TPLH AA +G  +IV +LL+ GAD + K++DG TPL L         
Sbjct: 24   NGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHL--------- 74
Query: 1126 DLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCRVT 1184
                       AA++G+L  V+ LL A  ++N +D  G   TPLHLAA E  HL +  V 
Sbjct: 75   -----------AAREGHLEIVEVLLKAGADVNAKDKDG--YTPLHLAAREG-HLEIVEVL 120
Query: 1185 L 1185
            L
Sbjct: 121  L 121

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 80.5 bits (197), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 84/184 (45%), Gaps = 46/184 (25%)
Query: 398 DLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH 457
           DL  +LLEA++ G    V R+L +    VN RD  G   TPLH AA +  + +VE LL +
Sbjct: 13  DLGKKLLEAARAGQDDEV-RILMANGADVNARDFTGW--TPLHLAAHFGHLEIVEVLLKN 69
Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACKGGDLTKV 517
           GADV    NA D  G TPLH AA++G                    E+ E          
Sbjct: 70  GADV----NAKDSLGVTPLHLAARRGHL------------------EIVEVL-------- 99
Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK 577
             L N   VNA D+            G  PLH A   GH E+ E+L+K+GA+VN  D + 
Sbjct: 100 --LKNGADVNASDS-----------HGFTPLHLAAKRGHLEIVEVLLKNGADVNAQDKFG 146
Query: 578 FTPL 581
            T  
Sbjct: 147 KTAF 150

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 34/141 (24%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAA------------------ 543
           ++L EA + G   +V+ L+ N   VNARD  G   TPLH AA                  
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNARDFTGW--TPLHLAAHFGHLEIVEVLLKNGADV 73
Query: 544 ------GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LL 590
                 G+ PLH A   GH E+ E+L+K+GA+VN +D   FTPLH AA +        LL
Sbjct: 74  NAKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLL 133
Query: 591 QHGADINLKNTDGKTALDLAV 611
           ++GAD+N ++  GKTA D+++
Sbjct: 134 KNGADVNAQDKFGKTAFDISI 154

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +        +TG TPLH A    + +   IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLE---IVEVLLKNGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N K+   + P+HLAA  GHL++++ LL+ GA VN  D  G T LH  A+    + V V
Sbjct: 72  DVNAKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL + AD +         F  S + G + L E+ ++
Sbjct: 132 LLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 24/121 (19%)
Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVS 1125
            +GA+VN  D   +TPLH AA  G  +IV +LL++GAD + K+  G TPL L         
Sbjct: 36   NGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHL--------- 86
Query: 1126 DLLRGNSALLDAAKKGNLGRVQKLL-TADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVT 1184
                       AA++G+L  V+ LL    ++N  D+ G   TPLHLAA ++ HL +  V 
Sbjct: 87   -----------AARRGHLEIVEVLLKNGADVNASDSHG--FTPLHLAA-KRGHLEIVEVL 132
Query: 1185 L 1185
            L
Sbjct: 133  L 133

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 80.5 bits (197), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 19/117 (16%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
           ++L EA + G   +V+ L+ N   VNA D AG           + PLH A   GH E+ E
Sbjct: 16  KKLLEATRAGQDDEVRILMANGADVNAMDDAG-----------VTPLHLAAKRGHLEIVE 64
Query: 562 MLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           +L+KHGA+VN +D W  TPLH AA        + LL++GAD+N ++  GKTA D+++
Sbjct: 65  VLLKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISI 121

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +          G TPLH A    + +   IVE L++ GA
Sbjct: 15  GKKLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLE---IVEVLLKHGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTAL 778
            +N  +     P+HLAA +GHL++++ LL  GA VN  D  G+TA 
Sbjct: 72  DVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAF 117

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +KHGA+VN +D W  TPLH AA  G  +IV +LL++GAD + +++ G T  D+ +  G++
Sbjct: 67   LKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNE 126
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 127  DLAEILQ 133

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 26/114 (22%)
Query: 1073 ADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNS 1132
            +DL K   L EA   G+ D VR+L+ +GAD +  +  G TPL L                
Sbjct: 12   SDLGK--KLLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHL---------------- 53
Query: 1133 ALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTL 1185
                AAK+G+L  V+ LL    ++N  D+ GR  TPLHLAA    HL +  V L
Sbjct: 54   ----AAKRGHLEIVEVLLKHGADVNASDSWGR--TPLHLAA-TVGHLEIVEVLL 100

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 80.1 bits (196), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +        + G TPLH A  + + +   IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLE---IVEVLLKYGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +     P+HLAAD GHL++++ LL+ GA VN  D  G T LH  A D   + V V
Sbjct: 72  DVNAWDNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL + AD +         F  S + G + L E+ ++
Sbjct: 132 LLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 24/123 (19%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            + +GA+VN  D    TPLH AA  G  +IV +LL++GAD +  +  GATPL L       
Sbjct: 34   MANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHL------- 86
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
                         AA  G+L  V+ LL    ++N +D +G   TPLHLAA +  HL +  
Sbjct: 87   -------------AADNGHLEIVEVLLKHGADVNAKDYEG--FTPLHLAAYDG-HLEIVE 130
Query: 1183 VTL 1185
            V L
Sbjct: 131  VLL 133

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 80.1 bits (196), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 82/168 (48%), Gaps = 50/168 (29%)
Query: 451 VEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACK 510
           V  L+A+GADV    NA+D  G+TPLH AA  G                    E+ E   
Sbjct: 30  VRILMANGADV----NASDHVGWTPLHLAAYFGHL------------------EIVEVL- 66
Query: 511 GGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANV 570
                    L N   VNA D+ G   TPLH AA           GH EV E+L+K+GA+V
Sbjct: 67  ---------LKNGADVNADDSLG--VTPLHLAA---------DRGHLEVVEVLLKNGADV 106
Query: 571 NVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           N  D   FTPLH AA        + LL+HGAD+N ++  GKTA D+++
Sbjct: 107 NANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTAFDISI 154

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +        + G TPLH A    Y     IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLA---AYFGHLEIVEVLLKNGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +   + P+HLAAD GHL+V++ LL+ GA VN  D  G T LH  A     + V V
Sbjct: 72  DVNADDSLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL H AD +         F  S + G + L E+ ++
Sbjct: 132 LLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 24/123 (19%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            + +GA+VN +D   +TPLH AA  G  +IV +LL++GAD +  +  G TPL L       
Sbjct: 34   MANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHL------- 86
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLL-TADNINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
                         AA +G+L  V+ LL    ++N  D  G   TPLHLAA    HL +  
Sbjct: 87   -------------AADRGHLEVVEVLLKNGADVNANDHNG--FTPLHLAA-NIGHLEIVE 130
Query: 1183 VTL 1185
            V L
Sbjct: 131  VLL 133

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 34/141 (24%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAA------------------ 543
           R+L EA + G   +V+ L+ N   VNA D  G  +TPLH AA                  
Sbjct: 16  RKLLEAARAGQDDEVRILMANGADVNAADNTG--TTPLHLAAYSGHLEIVEVLLKHGADV 73
Query: 544 ------GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALL 590
                 G  PLH A  +GH E+ E+L+K+GA+VN  D    TPLH AA        + LL
Sbjct: 74  DASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLL 133
Query: 591 QHGADINLKNTDGKTALDLAV 611
           +HGAD+N ++  GKTA D+++
Sbjct: 134 KHGADVNAQDKFGKTAFDISI 154

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +         TG TPLH A    Y     IVE L++ GA
Sbjct: 15  GRKLLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLA---AYSGHLEIVEVLLKHGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            ++  +     P+HLAA  GHL++++ LL+ GA VN +D  G T LH  A+    + V V
Sbjct: 72  DVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL H AD +         F  S + G + L E+ ++
Sbjct: 132 LLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 23/134 (17%)
Query: 1045 TGTXXXXXNMYYGTLTPHNV--KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGAD 1102
            TGT       Y G L    V  KHGA+V+ +D++ +TPLH AA  G  +IV +LL++GAD
Sbjct: 46   TGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGAD 105
Query: 1103 PSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQ 1161
             +  + DG TPL L                    AAK G L  V+ LL    ++N +D  
Sbjct: 106  VNAMDSDGMTPLHL--------------------AAKWGYLEIVEVLLKHGADVNAQDKF 145
Query: 1162 GRNSTPLHLAAGEK 1175
            G+ +  + +  G +
Sbjct: 146  GKTAFDISIDNGNE 159

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 19/117 (16%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
           ++L EA + G   +V+ L+ N   VNA+D  G           L PL+ A ++GH E+ E
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNAKDEYG-----------LTPLYLATAHGHLEIVE 64
Query: 562 MLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           +L+K+GA+VN  D   FTPLH AA       A+ LL+HGAD+N ++  GKTA D+++
Sbjct: 65  VLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISI 121

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKG 731
           G  LLEA R G    V+  + +   VN K  Y G TPL+ A    + +   IVE L++ G
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAKDEY-GLTPLYLATAHGHLE---IVEVLLKNG 70
Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTAL 778
           A +N  +     P+HLAA +GHL++ + LL+ GA VN  D  G+TA 
Sbjct: 71  ADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAF 117

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 724 VESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR 783
           V  L+  GA +N K++  L P++LA   GHL++++ LL+ GA VN VD +G T LH  A 
Sbjct: 30  VRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89
Query: 784 DDKTQAVRVLLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
               +   VLL H AD +         F  S   G + L E+ ++
Sbjct: 90  IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K+GA+VN  D   FTPLH AA  G  +I  +LL+HGAD + +++ G T  D+ +  G++
Sbjct: 67   LKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNE 126
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 127  DLAEILQ 133

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 7/156 (4%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKG 731
           G  LLEA R G    V+  + +   VN +  Y GDTPLH A    + +   IVE L++ G
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNAEDTY-GDTPLHLAARVGHLE---IVEVLLKNG 70
Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           A +N  +     P+HLAA  GHL++++ LL+ GA VN  D +G T LH  A     + V 
Sbjct: 71  ADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVE 130
Query: 792 VLLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFE 825
           VLL + AD +         F  S + G + L E+ +
Sbjct: 131 VLLKYGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 24/123 (19%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            + +GA+VN  D +  TPLH AA  G  +IV +LL++GAD +  +  G+TPL L       
Sbjct: 34   MANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHL------- 86
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
                         AAK+G+L  V+ LL    ++N  D  G  STPLHLAA +  HL +  
Sbjct: 87   -------------AAKRGHLEIVEVLLKYGADVNADDTIG--STPLHLAA-DTGHLEIVE 130
Query: 1183 VTL 1185
            V L
Sbjct: 131  VLL 133

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 82/168 (48%), Gaps = 50/168 (29%)
Query: 451 VEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACK 510
           V  L+A+GADV    NA D  G+TPLH AA  G                    E+ E   
Sbjct: 30  VRILMANGADV----NAADVVGWTPLHLAAYWGHL------------------EIVEVL- 66
Query: 511 GGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANV 570
                    L N   VNA DT G  STPLH AA          +GH E+ E+L+K+GA+V
Sbjct: 67  ---------LKNGADVNAYDTLG--STPLHLAA---------HFGHLEIVEVLLKNGADV 106
Query: 571 NVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           N  D    TPLH AA        + LL++GAD+N ++  GKTA D+++
Sbjct: 107 NAKDDNGITPLHLAANRGHLEIVEVLLKYGADVNAQDKFGKTAFDISI 154

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 73.9 bits (180), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +          G TPLH A    Y     IVE L++ GA
Sbjct: 15  GKKLLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLA---AYWGHLEIVEVLLKNGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +     P+HLAA  GHL++++ LL+ GA VN  D  G T LH  A     + V V
Sbjct: 72  DVNAYDTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL + AD +         F  S N G + L E+ ++
Sbjct: 132 LLKYGADVNAQDKFGKTAFDISINNGNEDLAEILQK 167

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 24/123 (19%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            + +GA+VN AD+  +TPLH AA  G  +IV +LL++GAD +  +  G+TPL L       
Sbjct: 34   MANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGSTPLHL------- 86
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLL-TADNINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
                         AA  G+L  V+ LL    ++N +D  G   TPLHLAA  + HL +  
Sbjct: 87   -------------AAHFGHLEIVEVLLKNGADVNAKDDNG--ITPLHLAA-NRGHLEIVE 130
Query: 1183 VTL 1185
            V L
Sbjct: 131  VLL 133

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +         TG TPLH A  S + +   IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLE---IVEVLLKHGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            ++  +     P+HLAA  GHL++++ LL+ GA VN  D+ G T LH  A +   + V V
Sbjct: 72  DVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEV 131
Query: 793 LLSHNADTS 801
           LL + AD +
Sbjct: 132 LLKYGADVN 140

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 21/120 (17%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +KHGA+V+ AD++ FTPLH AA  G  +IV +LL++GAD +  +  G+TPL L       
Sbjct: 67   LKHGADVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHL------- 119
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
                         AA +G+L  V+ LL    ++N +D  G+ +  + +  G +     CR
Sbjct: 120  -------------AADEGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLAKSCR 166

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 19/117 (16%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
           ++L EA + G   +V+ L+ N   VNA D  G           L PLH A   GH E+ E
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNALDEDG-----------LTPLHLAAQLGHLEIVE 64
Query: 562 MLVKHGANVNVADLWKFTPLHEAAAKA-------LLQHGADINLKNTDGKTALDLAV 611
           +L+K+GA+VN  D +  TPLH AA +        LL+HGAD+N ++  GKTA D+++
Sbjct: 65  VLLKYGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISI 121

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 724 VESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR 783
           V  L+  GA +N  +++ L P+HLAA LGHL++++ LL+ GA VN  D  G T LH  A 
Sbjct: 30  VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 784 DDKTQAVRVLLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
               + V VLL H AD +         F  S + G + L E+ ++
Sbjct: 90  RGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K+GA+VN  D +  TPLH AA +G  +IV +LL+HGAD + +++ G T  D+ +  G++
Sbjct: 67   LKYGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 126
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 127  DLAEILQ 133

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 19/117 (16%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
           ++L EA + G   +V+ L+ N   VNA D  G  +TPLH AA          Y H E+ E
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNANDRKG--NTPLHLAA---------DYDHLEIVE 64
Query: 562 MLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           +L+KHGA+VN  D    TPLH AA        + LL+HGAD+N ++  GKTA D+++
Sbjct: 65  VLLKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISI 121

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +      +   G+TPLH A    + +   IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLE---IVEVLLKHGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTAL 778
            +N  + +   P+HLAA  GHL++++ LL+ GA VN  D  G+TA 
Sbjct: 72  DVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAF 117

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 724 VESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR 783
           V  L+  GA +N  +++   P+HLAAD  HL++++ LL+ GA VN  D  G T LH  A 
Sbjct: 30  VRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAAL 89
Query: 784 DDKTQAVRVLLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
               + V VLL H AD +         F  S + G + L E+ ++
Sbjct: 90  FGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +KHGA+VN  D    TPLH AA  G  +IV +LL+HGAD + +++ G T  D+ +  G++
Sbjct: 67   LKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 126
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 127  DLAEILQ 133

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 73.9 bits (180), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 34/141 (24%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAA------------------ 543
           ++L EA + G   +V+ L+ N   VNA D +G   TPLH AA                  
Sbjct: 16  KKLLEAARAGRDDEVRILMANGADVNAEDASGW--TPLHLAAFNGHLEIVEVLLKNGADV 73
Query: 544 ------GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALL 590
                 G+ PL  A  +GH E+ E+L+K+GA+VN  D+   TPLH AA        + LL
Sbjct: 74  NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLL 133
Query: 591 QHGADINLKNTDGKTALDLAV 611
           ++GAD+N ++  GKTA D+++
Sbjct: 134 KNGADVNAQDKFGKTAFDISI 154

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  + +         +G TPLH A  + + +   IVE L++ GA
Sbjct: 15  GKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLE---IVEVLLKNGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
            +N  +   + P+ LAA  GHL++++ LL+ GA VN  D+ G T LH  A     + V V
Sbjct: 72  DVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEV 131
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
           LL + AD +         F  S + G + L E+ ++
Sbjct: 132 LLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 23/110 (20%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            + +GA+VN  D   +TPLH AA  G  +IV +LL++GAD +  +  G TPL L       
Sbjct: 34   MANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRL------- 86
Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLL-TADNINCRDAQGRNSTPLHLAA 1172
                         AA  G+L  V+ LL    ++N  D +G   TPLHLAA
Sbjct: 87   -------------AALFGHLEIVEVLLKNGADVNANDMEGH--TPLHLAA 121

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 73.9 bits (180), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 17/148 (11%)
Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           G KD V+ LL +GA ++A D  G  PLH A   GH +VV+LLL   A+PN +D+   TPL
Sbjct: 15  GNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPL 74
Query: 62  HEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH--------KDRSCYLAHGAD 113
           H AA  G  +V + +  ++ +  + +   G       P+H        +     L+ GAD
Sbjct: 75  HLAAENGHKEV-VKLLLSQGADPNAKDSDGK-----TPLHLAAENGHKEVVKLLLSQGAD 128
Query: 114 PFLKNQEGQTPLDLTVA---EDVRSLLQ 138
           P   + +G+TPLDL      E+V  LL+
Sbjct: 129 PNTSDSDGRTPLDLAREHGNEEVVKLLE 156

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 73.9 bits (180), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  L+EA   G+  RVK  L +          G TPLH A  + +   K +V+ L+ +GA
Sbjct: 5   GKRLIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGH---KEVVKLLLSQGA 61
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
             N K+ +   P+HLAA+ GH +V+  LL  GA  N  D  G+T LH  A +   + V++
Sbjct: 62  DPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKL 121
Query: 793 LLSHNAD--TSIVSLLVIFSCSTNLGLKHLLELFERE 827
           LLS  AD  TS          +   G + +++L E++
Sbjct: 122 LLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQ 158

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 24/123 (19%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVRE-GDQ 1122
            +++GA+VN +D    TPLH AA  G  ++V+LLL  GADP+ K+ DG TPL L  E G +
Sbjct: 24   LENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHK 83
Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
            +V  LL    A                    + N +D+ G+  TPLHLAA E  H  + +
Sbjct: 84   EVVKLLLSQGA--------------------DPNAKDSDGK--TPLHLAA-ENGHKEVVK 120
Query: 1183 VTL 1185
            + L
Sbjct: 121  LLL 123

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 73.6 bits (179), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  L+EA   G+  RVK  L +          G TPLH A  + +   K IV+ L+ KGA
Sbjct: 5   GKRLIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGH---KEIVKLLLSKGA 61
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
             N K+ +   P+H AA+ GH +++  LL  GA  N  D  G+T LH  A +   + V++
Sbjct: 62  DPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKL 121
Query: 793 LLSHNAD--TSIVSLLVIFSCSTNLGLKHLLELFERE 827
           LLS  AD  TS          +   G + +++L E++
Sbjct: 122 LLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQ 158

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 24/125 (19%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVRE-GDQ 1122
            +++GA+ N +D    TPLH AA  G  +IV+LLL  GADP+ K+ DG TPL    E G +
Sbjct: 24   LENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHK 83
Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
            ++  LL    A                    + N +D+ GR  TPLH AA E  H  + +
Sbjct: 84   EIVKLLLSKGA--------------------DPNAKDSDGR--TPLHYAA-ENGHKEIVK 120
Query: 1183 VTLGK 1187
            + L K
Sbjct: 121  LLLSK 125

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 114/290 (39%), Gaps = 72/290 (24%)
Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           G  + V  LL  GA I+  +  GL  LH AC   + D+V+ L+E  AN N  DN  + PL
Sbjct: 51  GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPL 110
Query: 62  HEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEG 121
           H AA+ G  D+              +Y+   G   G                    N EG
Sbjct: 111 HAAASCGYLDIA-------------EYLISQGAHVGAV------------------NSEG 139
Query: 122 QTPLDLTVAEDVRSLLQDAM----AQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPA 177
            TPLD+   E +  LLQ+ +         A    E   +    Q+ N+   ++V      
Sbjct: 140 DTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV------ 193
Query: 178 QYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAG 237
           +++ SGG                                 LH A + G+ EV ++LI+A 
Sbjct: 194 RHAKSGG-------------------------------TALHVAAAKGYTEVLKLLIQAR 222
Query: 238 ANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
            +VN  D   +TPLH AA   + E C +L+    D    N   ++A DVA
Sbjct: 223 YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 109/258 (42%), Gaps = 35/258 (13%)
Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
            L A   GD   V RLL     I N  ++DG   T LH A   + V +V++L+ +GA+++
Sbjct: 44  FLAACSSGDTEEVLRLLERGADI-NYANVDGL--TALHQACIDDNVDMVKFLVENGANIN 100
Query: 463 SKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRE----LFEACKGGDLTKVK 518
             DN     G+ PLH AA  G                    E    L  A +      ++
Sbjct: 101 QPDNE----GWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQ 156
Query: 519 KLVNPQTVNA------------RD-----TAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
             VN Q V+             RD      +G  +   H  +G   LH A + G+ EV +
Sbjct: 157 NEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLK 216
Query: 562 MLVKHGANVNVADLWKFTPLH-------EAAAKALLQHGADINLKNTDGKTALDLAVPCT 614
           +L++   +VN+ D   +TPLH       E A + L+++  D+   N  G+TA D+A    
Sbjct: 217 LLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI 276
Query: 615 RAVLSGDHKKEELLEAAR 632
              L    KK+ LL + +
Sbjct: 277 LGYLEELQKKQNLLHSEK 294

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 32/257 (12%)
Query: 541 FAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHG 593
           F  G V L  ACS G  E    L++ GA++N A++   T LH+A         K L+++G
Sbjct: 38  FDDGAVFLA-ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENG 96
Query: 594 ADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWC 653
           A+IN  + +G   L  A  C    ++     E L+     +G        PL   +    
Sbjct: 97  ANINQPDNEGWIPLHAAASCGYLDIA-----EYLISQGAHVGAVNSEGDTPLDIAEEEAM 151
Query: 654 SCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRV-----KKFLTSDVVN-FKHPYTGDT 707
               + E+          +    +EA R+ +  R+     +++L S  +N  +H  +G T
Sbjct: 152 EELLQNEVN---------RQGVDIEAARK-EEERIMLRDARQWLNSGHINDVRHAKSGGT 201
Query: 708 PLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKV 767
            LH A    Y +   +++ LI+    +N K+ +   P+H AA  G  +    L+     +
Sbjct: 202 ALHVAAAKGYTE---VLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258
Query: 768 NLVDVLGQTALHRTARD 784
             V+ +GQTA      D
Sbjct: 259 EAVNKVGQTAFDVADED 275

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL 1116
            V++GAN+N  D   + PLH AA+ G  DI   L+  GA     N +G TPLD+
Sbjct: 93   VENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDI 145

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
           ++L EA + G   +V+ L+ N   VNA D  G           L PLH A    H E+ E
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNAEDKVG-----------LTPLHLAAMNDHLEIVE 64
Query: 562 MLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           +L+K+GA+VN  D    TPLH  A        + LL+HGAD+N ++  GKTA D+++
Sbjct: 65  VLLKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISI 121

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 724 VESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR 783
           V  L+  GA +N ++K  L P+HLAA   HL++++ LL+ GA VN +D +G+T LH  A 
Sbjct: 30  VRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAM 89
Query: 784 DDKTQAVRVLLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
               + V VLL H AD +         F  S + G + L E+ ++
Sbjct: 90  YGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K+GA+VN  D    TPLH  A  G  +IV +LL+HGAD + +++ G T  D+ +  G++
Sbjct: 67   LKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNE 126
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 127  DLAEILQ 133

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 16/135 (11%)
Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           GR ++V+ LL  GA ++A +  G  PLH A S    ++  +LLE  ANP+ +D++  T +
Sbjct: 84  GRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAM 143
Query: 62  HEAAAKGKTDVC-IGIYFAEHSSKSNQYVYGIGGGTGCPMH--------KDRSCYLAHGA 112
           H AAAKG   +  I +Y+     K++  +    G T  P+H        ++    ++ GA
Sbjct: 144 HRAAAKGNLKMIHILLYY-----KASTNIQDTEGNT--PLHLACDEERVEEAKLLVSQGA 196
Query: 113 DPFLKNQEGQTPLDL 127
             +++N+E +TPL +
Sbjct: 197 SIYIENKEEKTPLQV 211

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 85/188 (45%), Gaps = 52/188 (27%)
Query: 430 DLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQXXX 489
           D D R  T LH+A       +VE+LL  G  V+ KD+A    G++PLH AA  GR     
Sbjct: 37  DQDSR--TALHWACSAGHTEIVEFLLQLGVPVNDKDDA----GWSPLHIAASAGRD---- 86
Query: 490 XXXXXXXXXXXXXRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLH 549
                         E+ +A  G              VNA +  G   TPLH+AA      
Sbjct: 87  --------------EIVKALLG----------KGAQVNAVNQNG--CTPLHYAA------ 114
Query: 550 NACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQHGADINLKNTD 602
              S   +E+  ML++ GAN +  D ++ T +H AAAK        LL + A  N+++T+
Sbjct: 115 ---SKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTE 171
Query: 603 GKTALDLA 610
           G T L LA
Sbjct: 172 GNTPLHLA 179

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 46/208 (22%)
Query: 548 LHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAA-------KALLQHGADINLKN 600
           LH ACS GH E+ E L++ G  VN  D   ++PLH AA+       KALL  GA +N  N
Sbjct: 44  LHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVN 103
Query: 601 TDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKME 660
            +G T L  A    R  +           A  ++ GG +                     
Sbjct: 104 QNGCTPLHYAASKNRHEI-----------AVMLLEGGAN--------------------- 131
Query: 661 LMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKR 720
               P  KD ++   +  A  +G+   +   L            G+TPLH A      +R
Sbjct: 132 ----PDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDE---ER 184
Query: 721 KAIVESLIRKGAHLNEKNKELLAPIHLA 748
               + L+ +GA +  +NKE   P+ +A
Sbjct: 185 VEEAKLLVSQGASIYIENKEEKTPLQVA 212

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 18/125 (14%)
Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLD----------- 1115
            G  VN  D   ++PLH AA+ G+ +IV+ LL  GA  +  N++G TPL            
Sbjct: 63   GVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIA 122
Query: 1116 -LVREG--DQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLA 1171
             ++ EG  + D  D     +A+  AA KGNL  +  LL    + N +D +G  +TPLHLA
Sbjct: 123  VMLLEGGANPDAKDHYEA-TAMHRAAAKGNLKMIHILLYYKASTNIQDTEG--NTPLHLA 179
Query: 1172 AGEKR 1176
              E+R
Sbjct: 180  CDEER 184

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 16/135 (11%)
Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           GR ++V+ LL  GA ++A +  G  PLH A S    ++  +LLE  ANP+ +D++  T +
Sbjct: 85  GRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAM 144
Query: 62  HEAAAKGKTDVC-IGIYFAEHSSKSNQYVYGIGGGTGCPMH--------KDRSCYLAHGA 112
           H AAAKG   +  I +Y+     K++  +    G T  P+H        ++    ++ GA
Sbjct: 145 HRAAAKGNLKMIHILLYY-----KASTNIQDTEGNT--PLHLACDEERVEEAKLLVSQGA 197
Query: 113 DPFLKNQEGQTPLDL 127
             +++N+E +TPL +
Sbjct: 198 SIYIENKEEKTPLQV 212

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 85/188 (45%), Gaps = 52/188 (27%)
Query: 430 DLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQXXX 489
           D D R  T LH+A       +VE+LL  G  V+ KD+A    G++PLH AA  GR     
Sbjct: 38  DQDSR--TALHWACSAGHTEIVEFLLQLGVPVNDKDDA----GWSPLHIAASAGRD---- 87
Query: 490 XXXXXXXXXXXXXRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLH 549
                         E+ +A  G              VNA +  G   TPLH+AA      
Sbjct: 88  --------------EIVKALLG----------KGAQVNAVNQNG--CTPLHYAA------ 115
Query: 550 NACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQHGADINLKNTD 602
              S   +E+  ML++ GAN +  D ++ T +H AAAK        LL + A  N+++T+
Sbjct: 116 ---SKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTE 172
Query: 603 GKTALDLA 610
           G T L LA
Sbjct: 173 GNTPLHLA 180

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 46/208 (22%)
Query: 548 LHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAA-------KALLQHGADINLKN 600
           LH ACS GH E+ E L++ G  VN  D   ++PLH AA+       KALL  GA +N  N
Sbjct: 45  LHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVN 104
Query: 601 TDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKME 660
            +G T L  A    R  +           A  ++ GG +                     
Sbjct: 105 QNGCTPLHYAASKNRHEI-----------AVMLLEGGAN--------------------- 132
Query: 661 LMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKR 720
               P  KD ++   +  A  +G+   +   L            G+TPLH A      +R
Sbjct: 133 ----PDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDE---ER 185
Query: 721 KAIVESLIRKGAHLNEKNKELLAPIHLA 748
               + L+ +GA +  +NKE   P+ +A
Sbjct: 186 VEEAKLLVSQGASIYIENKEEKTPLQVA 213

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 18/125 (14%)
Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLD----------- 1115
            G  VN  D   ++PLH AA+ G+ +IV+ LL  GA  +  N++G TPL            
Sbjct: 64   GVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIA 123
Query: 1116 -LVREG--DQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLA 1171
             ++ EG  + D  D     +A+  AA KGNL  +  LL    + N +D +G  +TPLHLA
Sbjct: 124  VMLLEGGANPDAKDHYEA-TAMHRAAAKGNLKMIHILLYYKASTNIQDTEG--NTPLHLA 180
Query: 1172 AGEKR 1176
              E+R
Sbjct: 181  CDEER 185

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+  L ++   F   + G +PLH A    +    +  E L+R G 
Sbjct: 3   GKKLLEAARAGQDDEVR-ILMANGAPFTTDWLGTSPLHLAAQYGHF---STTEVLLRAGV 58
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
             + + K    P+H+AA  GH ++++ LL+ GA VN  D+L  TALH     +  + V +
Sbjct: 59  SRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL 118
Query: 793 LLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFE 825
           L+ + AD    S      F  S + G + L E+ +
Sbjct: 119 LIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +KHGA+VN  D+ K T LH A      ++V LL+++GAD   +++   T  D+ +  G++
Sbjct: 87   LKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE 146
Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 147  DLAEILQ 153

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 19/117 (16%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
           ++L EA + G   +V+ L  N   VNA D  G   TPLH AA L         GH E+ E
Sbjct: 16  KKLLEAARAGQDDEVRILTANGADVNANDYWGH--TPLHLAAML---------GHLEIVE 64
Query: 562 MLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           +L+K+GA+VN       TPLH AA        + LL+HGAD+N ++  GKTA D+++
Sbjct: 65  VLLKNGADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISI 121

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           G  LLEA R G    V+    +      + Y G TPLH A    + +   IVE L++ GA
Sbjct: 15  GKKLLEAARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLE---IVEVLLKNGA 71
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTAL 778
            +N        P+HLAA   HL++++ LL+ GA VN  D  G+TA 
Sbjct: 72  DVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAF 117

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 724 VESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR 783
           V  L   GA +N  +     P+HLAA LGHL++++ LL+ GA VN     G+T LH  A 
Sbjct: 30  VRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAW 89
Query: 784 DDKTQAVRVLLSHNADTSIVSLL--VIFSCSTNLGLKHLLELFER 826
            D  + V VLL H AD +         F  S + G + L E+ ++
Sbjct: 90  ADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQ-DV 1124
            +GA+VN  D W  TPLH AA  G  +IV +LL++GAD +     G TPL L    D  ++
Sbjct: 36   NGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEI 95
Query: 1125 SDLLRGNSALLDAAKKGNLGRVQKLLTADNIN 1156
             ++L  + A ++A  K   G+    ++ DN N
Sbjct: 96   VEVLLKHGADVNAQDK--FGKTAFDISIDNGN 125

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 16/147 (10%)
Query: 2   GRKDVVEYLLASG-ASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           G  +VV+YLL++G   ++ +DDGG  P+  A  + H D+V+LLL   ++ N RDN     
Sbjct: 88  GHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENIC 147
Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH----KDR-SC---YLAHGA 112
           LH AA  G    C+ I     ++K + +   I G +  P+H    ++R  C   +L+  +
Sbjct: 148 LHWAAFSG----CVDIAEILLAAKCDLHAVNIHGDS--PLHIAARENRYDCVVLFLSRDS 201
Query: 113 DPFLKNQEGQTPLDL-TVAEDVRSLLQ 138
           D  LKN+EG+TPL   ++   V S LQ
Sbjct: 202 DVTLKNKEGETPLQCASLNSQVWSALQ 228

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 18/126 (14%)
Query: 1077 KFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGD--QDVSDLLR----- 1129
            K +PLH AA  G  DI  +L+Q GA+    + D  TPL    E +  + V  L++     
Sbjct: 11   KRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV 70
Query: 1130 ------GNSALLDAAKKGNLGRVQKLLTAD--NINCRDAQGRNSTPLHLAAGEKRHLLMC 1181
                  G++ L  AAKKG+   VQ LL+    ++NC+D  G   TP+ + A E +H+ + 
Sbjct: 71   DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGW--TPM-IWATEYKHVDLV 127
Query: 1182 RVTLGK 1187
            ++ L K
Sbjct: 128  KLLLSK 133

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 14/134 (10%)
Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           GR ++V+ LL  GA ++A +  G  PLH A S    ++  +LLE  ANP+ +D+++ T +
Sbjct: 84  GRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAM 143
Query: 62  HEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH--------KDRSCYLAHGAD 113
           H AAAKG   +   + F     K++  +    G T  P+H        ++    +  GA 
Sbjct: 144 HRAAAKGNLKMVHILLF----YKASTNIQDTEGNT--PLHLACDEERVEEAKFLVTQGAS 197
Query: 114 PFLKNQEGQTPLDL 127
            +++N+E +TPL +
Sbjct: 198 IYIENKEEKTPLQV 211

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 85/188 (45%), Gaps = 52/188 (27%)
Query: 430 DLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQXXX 489
           D D R  T LH+A       +VE+LL  G  V+ KD+A    G++PLH AA  GR     
Sbjct: 37  DQDSR--TALHWACSAGHTEIVEFLLQLGVPVNDKDDA----GWSPLHIAASAGRD---- 86
Query: 490 XXXXXXXXXXXXXRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLH 549
                         E+ +A           LV    VNA +  G   TPLH+AA      
Sbjct: 87  --------------EIVKAL----------LVKGAHVNAVNQNG--CTPLHYAA------ 114
Query: 550 NACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQHGADINLKNTD 602
              S   +E+  ML++ GAN +  D +  T +H AAAK        LL + A  N+++T+
Sbjct: 115 ---SKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTE 171
Query: 603 GKTALDLA 610
           G T L LA
Sbjct: 172 GNTPLHLA 179

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 679 ACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN 738
           AC  G    V+  L   V        G +PLH A ++    R  IV++L+ KGAH+N  N
Sbjct: 47  ACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG---RDEIVKALLVKGAHVNAVN 103
Query: 739 KELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           +    P+H AA     ++   LL  GA  +  D    TA+HR A     + V +LL + A
Sbjct: 104 QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKA 163
Query: 799 DTSI 802
            T+I
Sbjct: 164 STNI 167

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD--V 1124
            G  VN  D   ++PLH AA+ G+ +IV+ LL  GA  +  N++G TPL      ++    
Sbjct: 63   GVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIA 122
Query: 1125 SDLLRGN-----------SALLDAAKKGNLGRVQKLL-TADNINCRDAQGRNSTPLHLAA 1172
              LL G            +A+  AA KGNL  V  LL    + N +D +G  +TPLHLA 
Sbjct: 123  VMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEG--NTPLHLAC 180
Query: 1173 GEKR 1176
             E+R
Sbjct: 181  DEER 184

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 77/163 (47%), Gaps = 46/163 (28%)
Query: 406 ASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD 465
           A++ G + VV  LL +    VN +D +GR  TPLH AA    + VV+ LL  GADV    
Sbjct: 9   AARNGHLEVVKLLLEAGAD-VNAKDKNGR--TPLHLAARNGHLEVVKLLLEAGADV---- 61
Query: 466 NATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACKGGDLTKVKKLVNPQT 525
           NA DK G TPLH AA+ G  +                + L EA  G D            
Sbjct: 62  NAKDKNGRTPLHLAARNGHLE--------------VVKLLLEA--GAD------------ 93
Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGA 568
           VNA+D  GR  TPLH AA           GH EV ++L++ GA
Sbjct: 94  VNAKDKNGR--TPLHLAA---------RNGHLEVVKLLLEAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 679 ACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEK 737
           A R G    VK  L +   VN K    G TPLH A  + + +   +V+ L+  GA +N K
Sbjct: 9   AARNGHLEVVKLLLEAGADVNAK-DKNGRTPLHLAARNGHLE---VVKLLLEAGADVNAK 64
Query: 738 NKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLS 795
           +K    P+HLAA  GHL+V+  LL  GA VN  D  G+T LH  AR+   + V++LL 
Sbjct: 65  DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 60.5 bits (145), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 17/121 (14%)
Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL--------- 1128
            TPLH AA  G  ++V+LLL+ GAD + K+++G TPL L  R G  +V  LL         
Sbjct: 4    TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 1129 ---RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCRVT 1184
                G + L  AA+ G+L  V+ LL A  ++N +D  GR  TPLHLAA    HL + ++ 
Sbjct: 64   KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR--TPLHLAA-RNGHLEVVKLL 120
Query: 1185 L 1185
            L
Sbjct: 121  L 121

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           G  ++V+ LL  GA ++A +  G  PLH A S    ++  +LLE  ANP+ +D+++ T +
Sbjct: 84  GXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAM 143
Query: 62  HEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH--------KDRSCYLAHGAD 113
           H AAAKG   +   + F     K++  +    G T  P+H        ++    +  GA 
Sbjct: 144 HRAAAKGNLKMVHILLF----YKASTNIQDTEGNT--PLHLACDEERVEEAKFLVTQGAS 197
Query: 114 PFLKNQEGQTPLDL 127
            +++N+E +TPL +
Sbjct: 198 IYIENKEEKTPLQV 211

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 52/188 (27%)
Query: 430 DLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQXXX 489
           D D R  T LH+A       +VE+LL  G  V+ KD+A    G++PLH AA  G      
Sbjct: 37  DQDSR--TALHWACSAGHTEIVEFLLQLGVPVNDKDDA----GWSPLHIAASAGXD---- 86
Query: 490 XXXXXXXXXXXXXRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLH 549
                         E+ +A           LV    VNA +  G   TPLH+AA      
Sbjct: 87  --------------EIVKAL----------LVKGAHVNAVNQNG--CTPLHYAA------ 114
Query: 550 NACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQHGADINLKNTD 602
              S   +E+  ML++ GAN +  D +  T +H AAAK        LL + A  N+++T+
Sbjct: 115 ---SKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTE 171
Query: 603 GKTALDLA 610
           G T L LA
Sbjct: 172 GNTPLHLA 179

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 82/208 (39%), Gaps = 46/208 (22%)
Query: 548 LHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAA-------KALLQHGADINLKN 600
           LH ACS GH E+ E L++ G  VN  D   ++PLH AA+       KALL  GA +N  N
Sbjct: 44  LHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVN 103
Query: 601 TDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKME 660
            +G T L  A    R  +           A  ++ GG +                     
Sbjct: 104 QNGCTPLHYAASKNRHEI-----------AVMLLEGGAN--------------------- 131
Query: 661 LMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKR 720
               P  KD +    +  A  +G+   V   L            G+TPLH A      +R
Sbjct: 132 ----PDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDE---ER 184
Query: 721 KAIVESLIRKGAHLNEKNKELLAPIHLA 748
               + L+ +GA +  +NKE   P+ +A
Sbjct: 185 VEEAKFLVTQGASIYIENKEEKTPLQVA 212

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 679 ACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN 738
           AC  G    V+  L   V        G +PLH A ++   +   IV++L+ KGAH+N  N
Sbjct: 47  ACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDE---IVKALLVKGAHVNAVN 103
Query: 739 KELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           +    P+H AA     ++   LL  GA  +  D    TA+HR A     + V +LL + A
Sbjct: 104 QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKA 163
Query: 799 DTSI 802
            T+I
Sbjct: 164 STNI 167

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 16/124 (12%)
Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD--V 1124
            G  VN  D   ++PLH AA+ G  +IV+ LL  GA  +  N++G TPL      ++    
Sbjct: 63   GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIA 122
Query: 1125 SDLLRGN-----------SALLDAAKKGNLGRVQKLL-TADNINCRDAQGRNSTPLHLAA 1172
              LL G            +A+  AA KGNL  V  LL    + N +D +G  +TPLHLA 
Sbjct: 123  VMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEG--NTPLHLAC 180
Query: 1173 GEKR 1176
             E+R
Sbjct: 181  DEER 184

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 88/193 (45%), Gaps = 54/193 (27%)
Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
           VN    DG  S+PLH AA + R  ++  LL HGA+  ++ NA       PLH A Q+G  
Sbjct: 79  VNVTSQDG--SSPLHVAALHGRADLIPLLLKHGANAGAR-NADQA---VPLHLACQQGHF 132
Query: 486 QXXXXXXXXXXXXXXXXRELFEACKGGDLTKVKKLVNPQTV-NARDTAGRKSTPLHFAAG 544
           Q                              VK L++     N +D +G  +TPL +A  
Sbjct: 133 QV-----------------------------VKCLLDSNAKPNKKDLSG--NTPLIYA-- 159
Query: 545 LVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA-------AAKALLQHGADIN 597
                  CS GH+E+  +L++HGA++N ++    T LHEA         + LL HGA + 
Sbjct: 160 -------CSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ 212
Query: 598 LKNTDGKTALDLA 610
           + N   +TA+D A
Sbjct: 213 VLNKRQRTAVDCA 225

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPL-------HEAAAKALLQHGADINL 598
           VPLH AC  GH++V + L+   A  N  DL   TPL       H      LLQHGA IN 
Sbjct: 121 VPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINA 180
Query: 599 KNTDGKTALDLAV 611
            N  G TAL  AV
Sbjct: 181 SNNKGNTALHEAV 193

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLV-REGDQDVS 1125
            G  VNV      +PLH AA  G+AD++ LLL+HGA+   +N D A PL L  ++G   V 
Sbjct: 76   GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135
Query: 1126 DL------------LRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLHLAA 1172
                          L GN+ L+ A   G+   V  LL    +IN  + +G  +T LH A 
Sbjct: 136  KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKG--NTALHEAV 193
Query: 1173 GEKRHLLMCRVTL 1185
             EK H+ +  + L
Sbjct: 194  IEK-HVFVVELLL 205

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 2  GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
          G  +VV+ LL +GA ++A+D  G  PLH A   GH +VV+LLLEA A+ N +D    TPL
Sbjct: 13 GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72
Query: 62 HEAAAKGKTDVC 73
          H AA  G  +V 
Sbjct: 73 HLAARNGHLEVV 84

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 704 TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
            G TPLH A  + + +   +V+ L+  GA +N K+K    P+HLAA  GHL+V+  LL  
Sbjct: 1   NGRTPLHLAARNGHLE---VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 57
Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLS 795
           GA VN  D  G+T LH  AR+   + V++LL 
Sbjct: 58  GADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 24/108 (22%)
Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAA 1138
            TPLH AA  G  ++V+LLL+ GAD + K+++G TPL L                    AA
Sbjct: 4    TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL--------------------AA 43
Query: 1139 KKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCRVTL 1185
            + G+L  V+ LL A  ++N +D  GR  TPLHLAA    HL + ++ L
Sbjct: 44   RNGHLEVVKLLLEAGADVNAKDKNGR--TPLHLAA-RNGHLEVVKLLL 88

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 7   VEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAA 66
           VEYLL +G+  + +D  G  PLH AC+ GH  VV LLL+  A  NT    N +PLH+AA 
Sbjct: 26  VEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAK 85
Query: 67  KGKTDVCIGIYFAEHSSKSNQYVYGI 92
            G  D+ + +  +  +S++   ++G+
Sbjct: 86  NGHVDI-VKLLLSYGASRNAVNIFGL 110

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PLH AC++GH +V E+L++  A VN       +PLH+AA    +++  LLLS GA  
Sbjct: 43  GWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGA-- 100
Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLL 306
                 S++A+++   R +        K   LL
Sbjct: 101 ------SRNAVNIFGLRPVDYTDDESMKSLLLL 127

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 543 AGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGAD 595
           AG  PLH AC++GH +V E+L++H A VN       +PLH+AA        K LL +GA 
Sbjct: 42  AGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGAS 101
Query: 596 INLKNTDGKTALD 608
            N  N  G   +D
Sbjct: 102 RNAVNIFGLRPVD 114

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 702 PYT---GDTPLHCA-VTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVL 757
           P+T   G+T LH A +    P     VE L++ G+  N K+     P+H A + GHL V+
Sbjct: 4   PFTNHRGETLLHIASIKGDIPS----VEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59
Query: 758 DTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVI--FSCSTNL 815
           + LL+  A VN       + LH  A++     V++LLS+ A  + V++  +     + + 
Sbjct: 60  ELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDE 119
Query: 816 GLKHLLELFEREQ 828
            +K LL L E+ +
Sbjct: 120 SMKSLLLLPEKNE 132

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 676 LLEACRQGDPSRVKKFL--TSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAH 733
           +   CR+G+   V+ +L  T + +N    + G +PLH A       R A+VE LI +GA 
Sbjct: 9   IFTQCREGNAVAVRLWLDNTENDLNQGDDH-GFSPLHWACRE---GRSAVVEMLIMRGAR 64
Query: 734 LNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL 793
           +N  N+    P+HLAA  GH D++  LL+  A +N V+  G   LH      + Q    L
Sbjct: 65  INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDL 124
Query: 794 LSHNADTSIVS 804
           +++ A  SI +
Sbjct: 125 VANGALVSICN 135

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +  GA +NV +    TPLH AA+ G  DIV+ LLQ+ AD +  N  G  PL       QD
Sbjct: 59   IMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD 118
Query: 1124 -VSDLLRGNSALLDAAKK 1140
             V++ L  N AL+    K
Sbjct: 119  QVAEDLVANGALVSICNK 136

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 676 LLEACRQGDPSRVKKFL--TSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAH 733
           +   CR+G+   V+ +L  T + +N    + G +PLH A       R A+VE LI +GA 
Sbjct: 4   IFTQCREGNAVAVRLWLDNTENDLNQGDDH-GFSPLHWACRE---GRSAVVEMLIMRGAR 59
Query: 734 LNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL 793
           +N  N+    P+HLAA  GH D++  LL+  A +N V+  G   LH      + Q    L
Sbjct: 60  INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDL 119
Query: 794 LSHNADTSIVS 804
           +++ A  SI +
Sbjct: 120 VANGALVSICN 130

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +  GA +NV +    TPLH AA+ G  DIV+ LLQ+ AD +  N  G  PL       QD
Sbjct: 54   IMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD 113
Query: 1124 -VSDLLRGNSALLDAAKK 1140
             V++ L  N AL+    K
Sbjct: 114  QVAEDLVANGALVSICNK 131

>pdb|4HKI|C Chain C, Tankyrase 2 In Complex With Flavone Length = 49

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 1196 KMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQ 1228
            KMAH+PPGHHSV GRPS  GL   EYV+YRGEQ
Sbjct: 1    KMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQ 33

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD-V 461
           L++A +  D+ +V +LL    + VN ++ +G   TPLH A   +R  +VE LL HGAD V
Sbjct: 29  LIKAVQNEDVDLVQQLLEGGAN-VNFQEEEG-GWTPLHNAVQMSREDIVELLLRHGADPV 86
Query: 462 HSKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXX----XXRELFEACKGGDLTKV 517
             K N     G TP   AA  G  +                        EA   G +  +
Sbjct: 87  LRKKN-----GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 141
Query: 518 KKLVNP-QTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLV-KHGANVNVAD- 574
           K L      VN R         L    G   L +A   GH EV ++L+ + GA+VN  D 
Sbjct: 142 KFLYKRGANVNLRRKTKEDQERLR-KGGATALMDAAEKGHVEVLKILLDEMGADVNACDN 200
Query: 575 LWKFTPLH----------EAAAKALLQHGADINLKNTDGKTALDLAV 611
           + +   +H          EA    LL HGAD+N++   GKT L LAV
Sbjct: 201 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAV 247

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 674 HCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           H L++A +  D   V++ L     VNF+    G TPLH AV      R+ IVE L+R GA
Sbjct: 27  HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS---REDIVELLLRHGA 83
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
               + K    P  LAA  G + +L   L  GA VN  D  G TA    A   K +A++ 
Sbjct: 84  DPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 143
Query: 793 LLSHNADTSI 802
           L    A+ ++
Sbjct: 144 LYKRGANVNL 153

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 1067 GANVNV-ADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATP------------ 1113
            GANVN   +   +TPLH A    + DIV LLL+HGADP  + ++GATP            
Sbjct: 48   GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKL 107
Query: 1114 LDLVREGDQDVSDL-LRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRNSTPLH-- 1169
            L L      DV++    G +A ++AA  G +  ++ L     N+N R     +   L   
Sbjct: 108  LKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG 167
Query: 1170 -----LAAGEKRHLLMCRVTLGKSFLQFNA 1194
                 + A EK H+ + ++ L +     NA
Sbjct: 168  GATALMDAAEKGHVEVLKILLDEMGADVNA 197

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD-V 461
           L++A +  D+ +V +LL    + VN ++ +G   TPLH A   +R  +VE LL HGAD V
Sbjct: 9   LIKAVQNEDVDLVQQLLEGGAN-VNFQEEEG-GWTPLHNAVQMSREDIVELLLRHGADPV 66
Query: 462 HSKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXX----XXRELFEACKGGDLTKV 517
             K N     G TP   AA  G  +                        EA   G +  +
Sbjct: 67  LRKKN-----GATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121
Query: 518 KKLVNP-QTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLV-KHGANVNVAD- 574
           K L      VN R         L    G   L +A   GH EV ++L+ + GA+VN  D 
Sbjct: 122 KFLYKRGANVNLRRKTKEDQERLR-KGGATALMDAAEKGHVEVLKILLDEMGADVNACDN 180
Query: 575 LWKFTPLH----------EAAAKALLQHGADINLKNTDGKTALDLAVP 612
           + +   +H          EA    LL HGAD+N++   GKT L LAV 
Sbjct: 181 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE 228

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 674 HCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           H L++A +  D   V++ L     VNF+    G TPLH AV      R+ IVE L+R GA
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS---REDIVELLLRHGA 63
Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
               + K    P  LAA  G + +L   L  GA VN  D  G TA    A   K +A++ 
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123
Query: 793 LLSHNADTSI 802
           L    A+ ++
Sbjct: 124 LYKRGANVNL 133

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 1059 LTPHNVKHGANVNVADL---WKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATP-- 1113
            L    ++ GANVN  +    W  TPLH A    + DIV LLL+HGADP  + ++GATP  
Sbjct: 20   LVQQLLEGGANVNFQEEEGGW--TPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFL 77
Query: 1114 ----------LDLVREGDQDVSDL-LRGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQ 1161
                      L L      DV++    G +A ++AA  G +  ++ L     N+N R   
Sbjct: 78   LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKT 137
Query: 1162 GRNSTPLH-------LAAGEKRHLLMCRVTLGKSFLQFNA 1194
              +   L        + A EK H+ + ++ L +     NA
Sbjct: 138  KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA 177

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
           G+  LHNA   GH E+ + L++ G NVNA D   +TPLH AAS + ++VC  L+  GA
Sbjct: 70  GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA 127

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAA-------KALLQHGADI 596
           G+  LHNA   GH E+ + LV+ G NVN AD   +TPLH AA+       K L++ GA +
Sbjct: 70  GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Query: 597 -NLKNTDGKTALD 608
             +  +D +TA D
Sbjct: 130 FAMTYSDMQTAAD 142

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
           G+  LHNA   GH E+ + L++ G NVNA D   +TPLH AAS + ++VC  L+  GA
Sbjct: 70  GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA 127

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAA-------KALLQHGADI 596
           G+  LHNA   GH E+ + LV+ G NVN AD   +TPLH AA+       K L++ GA +
Sbjct: 70  GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129
Query: 597 -NLKNTDGKTALD 608
             +  +D +TA D
Sbjct: 130 FAMTYSDMQTAAD 142

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
           +E   A K GDL +VK  V   + VN     GRK           PLH A   G  E+ E
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRK-----------PLHYAADCGQLEILE 52
Query: 562 MLVKHGANVNVADLWKFTPL-------HEAAAKALLQHGADINLKNTDGKTALD 608
            L+  GA++N  D    TPL       H +  K LL  GAD  +K  DG TAL+
Sbjct: 53  FLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALE 106

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 51/114 (44%), Gaps = 19/114 (16%)
Query: 503 RELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
           +E   A K GDL +VK  V   + VN     GRK           PLH A   G  E+ E
Sbjct: 9   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRK-----------PLHYAADCGQLEILE 57
Query: 562 MLVKHGANVNVADLWKFTPL-------HEAAAKALLQHGADINLKNTDGKTALD 608
            L+  GA++N  D    TPL       H +  K LL  GAD  +K  DG TA +
Sbjct: 58  FLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFE 111

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 724 VESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR 783
           V+  + KG  +N   +    P+H AAD G L++L+ LL  GA +N  D    T L     
Sbjct: 23  VKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82
Query: 784 DDKTQAVRVLLSHNADTSIVSL--LVIFSCSTNLGLKHLLE 822
           +     V++LLS  AD ++     L  F  + N  +K LL+
Sbjct: 83  EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 2  GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
          G+ D V  L+A+GA + A+D  G  PLH A   GH +VV+LLLEA A+ N +D +  T  
Sbjct: 17 GQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAF 76
Query: 62 HEAAAKGKTDVC 73
            +   G  D+ 
Sbjct: 77 DISIDNGNEDLA 88

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 398 DLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH 457
           DL  +LLEA++ G    V R+L +    V  +D +G  STPLH AA    + VV+ LL  
Sbjct: 5   DLGKKLLEAARAGQDDEV-RILMANGADVAAKDKNG--STPLHLAARNGHLEVVKLLLEA 61
Query: 458 GADVHSKDNATDKWGFTPL 476
           GADV    NA DK+G T  
Sbjct: 62  GADV----NAQDKFGKTAF 76

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDV 1124
            +GA+V   D    TPLH AA  G  ++V+LLL+ GAD + +++ G T  D+ +  G++D+
Sbjct: 28   NGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISIDNGNEDL 87
Query: 1125 SDLLR 1129
            +++L+
Sbjct: 88   AEILQ 92

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G+TPLH A  + + +    V+ L+ KGA +N ++K+   P+HLAA  GH +++  LL  G
Sbjct: 9   GNTPLHNAAKNGHAEE---VKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65
Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVS 804
           A VN     G T  H   ++   + V++L +  AD +  S
Sbjct: 66  ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVRE-GDQDVS 1125
            GA+VN       TPLH AA  G A+IV+LLL  GAD + +++DG TP  L ++ G  ++ 
Sbjct: 32   GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIV 91
Query: 1126 DLLRGNSALLDA 1137
             LL    A ++A
Sbjct: 92   KLLDAKGADVNA 103

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 42/185 (22%)
Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L +A    +   V  LL S P ++  +D DGR   PLH++  +    +  +LL+   +V+
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGR--IPLHWSVSFQAHEITSFLLSKMENVN 63
Query: 463 SKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACKGGDLTKVKKLVN 522
             D   D  G+TP H A                             C  G+L  VK L +
Sbjct: 64  LDDYPDDS-GWTPFHIA-----------------------------CSVGNLEVVKSLYD 93
Query: 523 -PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPL 581
            P   +      +  T LH A G            +EV++ L+++GA+V + D +   PL
Sbjct: 94  RPLKPDLNKITNQGVTCLHLAVG---------KKWFEVSQFLIENGASVRIKDKFNQIPL 144
Query: 582 HEAAA 586
           H AA+
Sbjct: 145 HRAAS 149

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 42/185 (22%)
Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L +A    +   V  LL S P ++  +D DGR   PLH++  +    +  +LL+   +V+
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGR--IPLHWSVSFQAHEITSFLLSKMENVN 63
Query: 463 SKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACKGGDLTKVKKLVN 522
             D   D  G+TP H A                             C  G+L  VK L +
Sbjct: 64  LDDYPDDS-GWTPFHIA-----------------------------CSVGNLEVVKSLYD 93
Query: 523 -PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPL 581
            P   +      +  T LH A G            +EV++ L+++GA+V + D +   PL
Sbjct: 94  RPLKPDLNKITNQGVTCLHLAVG---------KKWFEVSQFLIENGASVRIKDKFNQIPL 144
Query: 582 HEAAA 586
           H AA+
Sbjct: 145 HRAAS 149

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 42/185 (22%)
Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L +A    +   V  LL S P ++  +D DGR   PLH++  +    +  +LL+   +V+
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGR--IPLHWSVSFQAHEITSFLLSKMENVN 63
Query: 463 SKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACKGGDLTKVKKLVN 522
             D   D  G+TP H A                             C  G+L  VK L +
Sbjct: 64  LDDYPDDS-GWTPFHIA-----------------------------CSVGNLEVVKSLYD 93
Query: 523 -PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPL 581
            P   +      +  T LH A G            +EV++ L+++GA+V + D +   PL
Sbjct: 94  RPLKPDLNKITNQGVTCLHLAVG---------KKWFEVSQFLIENGASVRIKDKFNQIPL 144
Query: 582 HEAAA 586
           H AA+
Sbjct: 145 HRAAS 149

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           G+ D V  L+A+GA + A+D  G  PLH A   GH +VV+LLLEA A+   +D +  T  
Sbjct: 35  GQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAF 94
Query: 62  HEAAAKGKTDVC 73
             +   G  D+ 
Sbjct: 95  DISIDNGNEDLA 106

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 35/70 (50%)
Query: 218 LHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHN 277
           L  A   G  +   +L+  GA+V A D    TPLH AA    LEV  LLL  GAD    +
Sbjct: 28  LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQD 87
Query: 278 CHSKSAIDVA 287
              K+A D++
Sbjct: 88  KFGKTAFDIS 97

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDV 1124
            +GA+V   D    TPLH AA  G  ++V+LLL+ GAD   +++ G T  D+ +  G++D+
Sbjct: 46   NGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDL 105
Query: 1125 SDLLR 1129
            +++L+
Sbjct: 106  AEILQ 110

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 724 VESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTAL 778
           V  L+  GA +N K+K+   P+HLAA  GHL++++ LL+ GA VN  D  G+TA 
Sbjct: 18  VRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAF 72

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDV 1124
            +GA+VN  D   +TPLH AA +G  +IV +LL+ GAD + +++ G T  D+ +  G++D+
Sbjct: 24   NGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDL 83
Query: 1125 SDLLR 1129
            +++L+
Sbjct: 84   AEILQ 88

>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp Length = 229

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAA-------KALLQHGADI 596
           G+  LHNA    +Y + + L+  GANVN  D   +TPLH AA+        AL+QHGA I
Sbjct: 54  GITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAI 113
Query: 597 NLKN-TDGKTALDLAVP 612
                +DG TA +   P
Sbjct: 114 FATTLSDGATAFEKCDP 130

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PL +A       + ++L++ GANVNA      + LH A+ +  L +   L+  GAD 
Sbjct: 150 GRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS 209
Query: 274 TLHNCHSKSAIDVAPTREL 292
           +L NCH+ + + VA +R +
Sbjct: 210 SLKNCHNDTPLMVARSRRV 228

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            ++HGANVN       + LH A+ +G   +VR L++ GAD S KN    TPL + R   + 
Sbjct: 170  LQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARS--RR 227
Query: 1124 VSDLLRGNS 1132
            V D+LRG +
Sbjct: 228  VIDILRGKA 236

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 704 TGDTPLHCAVTSPYPKRKAIVESLIR-KGAHLNEKNKELLAPIHLAADLGHLDVLDTLLR 762
           TG TPLH AV +       + + L+R +  +LN +  +   P+ LAA L    +++ L+ 
Sbjct: 83  TGRTPLHAAVAADA---MGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLIT 139
Query: 763 LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
             A +N  D  G+TALH  A  + T+AV +LL H+A+
Sbjct: 140 ADADINAADNSGKTALHWAAAVNNTEAVNILLMHHAN 176

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 427 NCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQ 486
           + R  D  + T LH+AA  NR+ +V+Y ++ GA V   D        TPLH A ++G   
Sbjct: 34  DVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIV---DQLGGDLNSTPLHWATRQGHLS 90
Query: 487 XXXXXXXXXXXXXXXXRE----LFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHF 541
                            E    +  A + G  + V  L+   Q V+  D  G   TPL +
Sbjct: 91  MVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGM--TPLMW 148
Query: 542 AAGLVPLHNACSYGHYEV--TEMLVKHGANVNVADLW-KFTPLHEAAAKA-------LLQ 591
           AA          Y  + V  T +L+    +VN+ D + K T LH A           LL+
Sbjct: 149 AA----------YRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLE 198
Query: 592 HGADINLKNTDGKTALDLA 610
            GA+++ +N  G++ALDLA
Sbjct: 199 AGANVDAQNIKGESALDLA 217

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 8   EYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAK 67
           E+L      ++  D+ G  PL  A +FG  + VR LLE  A+P+       + L  A+  
Sbjct: 20  EHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTG 79
Query: 68  GKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDR----SCYLAHGADPFLKNQEGQT 123
           G TD+ +G+   E     N Y +  G      +H +        LA GAD   +   G T
Sbjct: 80  GYTDI-VGLLL-ERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYT 137
Query: 124 PLDLTVAEDVRSLLQ 138
           P+DL VA   R + Q
Sbjct: 138 PMDLAVALGYRKVQQ 152

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K GA+ NV D    +P+H+AA  G  D +++L++HGAD +  +  G+ P+ L +REG  
Sbjct: 63   LKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHS 122
Query: 1123 DVSDLLRGNSAL 1134
             V   L   S L
Sbjct: 123  SVVSFLAPESDL 134

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCA-VTSPYPKRKAIVESLIRKG 731
           G+ L  A  +GD  ++   L ++V        G T L    + +P   R+     L+ +G
Sbjct: 6   GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARR-----LLLRG 60
Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           A+ + K++   A IH AA  G LD L TLL   A VN+ D  G   LH  A++   + V 
Sbjct: 61  ANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120
Query: 792 VLLSHNA 798
            L+ H A
Sbjct: 121 FLVKHTA 127

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K GA+ NV D    +P+H+AA  G  D +++L++HGAD +  +  G+ P+ L +REG  
Sbjct: 61   LKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHS 120
Query: 1123 DVSDLLRGNSAL 1134
             V   L   S L
Sbjct: 121  SVVSFLAPESDL 132

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 8   EYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAK 67
           E+L      ++  D+ G  PL  A +FG  + VR LLE  A+P+       + L  A+  
Sbjct: 20  EHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTG 79
Query: 68  GKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDR-------SCYLAHGADPFLKNQE 120
           G TD+ +G+   E     N  +Y   GGT   ++  R          LA GAD   +   
Sbjct: 80  GYTDI-VGLLL-ERDVDIN--IYDWNGGTPL-LYAVRGNHVKCVEALLARGADLTTEADS 134
Query: 121 GQTPLDLTVAEDVRSLLQ 138
           G TP+DL VA   R + Q
Sbjct: 135 GYTPMDLAVALGYRKVQQ 152

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCA-VTSPYPKRKAIVESLIRKG 731
           G+ L  A  +GD  ++   L ++V        G T L    + +P   R+     L+ +G
Sbjct: 6   GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARR-----LLLRG 60
Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           A+ + K++   A IH AA  G LD L TLL   A VN+ D  G   LH  A++   + V 
Sbjct: 61  ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120
Query: 792 VLLSHNA 798
            L+ H A
Sbjct: 121 FLVKHTA 127

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCA-VTSPYPKRKAIVESLIRKG 731
           G+ L  A  +GD  ++   L ++V        G T L    + +P   R+     L+ +G
Sbjct: 6   GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARR-----LLLRG 60
Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           A+ + K++   A IH AA  G LD L TLL   A VN+ D  G   LH  A++   + V 
Sbjct: 61  ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120
Query: 792 VLLSHNA 798
            L+ H A
Sbjct: 121 FLVKHTA 127

>pdb|3GOY|A Chain A, Crystal Structure Of Human Poly(Adp-Ribose) Polymerase 14, Catalytic Fragment In Complex With An Inhibitor 3-Aminobenzamide Length = 193

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 866 SPSFSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRK 925
           S    Q    +++LL  D E+ TVA +   T              S + I +I+++QN  
Sbjct: 1   SMDMKQQNFCVVELLPSDPEYNTVASKFNQTC-------------SHFRIEKIERIQNPD 47
Query: 926 LWERYVHRRAEVADENGGQAHERMLFHGS-----PFINAIVQKGFDERHA 970
           LW  Y  ++  +  +NG   +E+ LFHG+     P +N   + GF+  +A
Sbjct: 48  LWNSYQAKKKTMDAKNGQTMNEKQLFHGTDAGSVPHVN---RNGFNRSYA 94

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 204 IMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVC 263
           ++  G+  AL L     ACS G+ ++ +ML+  G +VN  D    TPL  A   + ++  
Sbjct: 64  LLGKGRESALSL-----ACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCV 118
Query: 264 SLLLSEGADPTLHNCHSKSAIDVAPT---RELQQRLSNEF 300
            +LL  GADPT+      +++D+A     R +QQ + +  
Sbjct: 119 KMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 158

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 204 IMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVC 263
           ++  G+  AL L     ACS G+ ++ +ML+  G +VN  D    TPL  A   + ++  
Sbjct: 62  LLGKGRESALSL-----ACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCV 116
Query: 264 SLLLSEGADPTLHNCHSKSAIDVAPT---RELQQRLSNEF 300
            +LL  GADPT+      +++D+A     R +QQ + +  
Sbjct: 117 KMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 156

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 1054 MYYGT--LTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGA 1111
            M +G+  +    +K GA+ NV D    +P+H+AA  G  D +++L++HGAD +  +  GA
Sbjct: 49   MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGA 108
Query: 1112 TPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLA 1171
             P+ L                    A ++G+   V  L    +++ RDA+G   TPL LA
Sbjct: 109  LPIHL--------------------AVQEGHTAVVSFLAAESDLHRRDARGL--TPLELA 146

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 125/329 (37%), Gaps = 74/329 (22%)
Query: 172 SLPPPAQYSGSGGD--------SVSLPPTSPPQ-PLALET-------VIMPSGQAVALGL 215
           SL P  Q  G+G D        ++ +P    P+ P+ L T       +  P  +     +
Sbjct: 61  SLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSYAITEPITRESVNII 120
Query: 216 VPLHN------ACSYGHFEVTEMLI--------KAGANVNAMDLWQFTPLHEAASKSRLE 261
            P HN        S    E +E LI         AGA+VNA D  + TPL  A    R  
Sbjct: 121 DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAXDCDENTPLXLAVLARRRR 180
Query: 262 VCSLLLSEGADPTLHNCHSKSAI-DVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKF 320
           + + L   GADPT++N   +SA+   A  R+    +      + L     +GD   + + 
Sbjct: 181 LVAYLXKAGADPTIYNKSERSALHQAAANRDFGXXV------YXLNSTKLKGDIEELDRN 234
Query: 321 LTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQ 380
             + +    H    D      LL++             ++       +D+ +  G TAL 
Sbjct: 235 GXTALXIVAHNEGRDQVASAKLLVEK----------GAKVDYDGAARKDSEKYKGRTALH 284
Query: 381 VAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLH 440
            A + S       P V     + L   KG +               + +D DG+  TP+ 
Sbjct: 285 YAAQVSNX-----PIV-----KYLVGEKGSNK--------------DKQDEDGK--TPIX 318
Query: 441 FAAGYNRVAVVEYLLAHGADVHSKDNATD 469
            AA   R+ VV YL+  GA V + D ATD
Sbjct: 319 LAAQEGRIEVVXYLIQQGASVEAVD-ATD 346

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 204 IMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVC 263
           ++  G+  AL L     ACS G+ ++ +ML+  G +VN  D    TPL  A   + ++  
Sbjct: 80  LLGKGRESALSL-----ACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCV 134
Query: 264 SLLLSEGADPTLHNCHSKSAIDVAPT---RELQQRLSNEF 300
            +LL  GADPT+      +++D+A     R +QQ + +  
Sbjct: 135 KMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 174

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 24/120 (20%)
Query: 1054 MYYGT--LTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGA 1111
            M +G+  +    +K GA+ NV D    +P+H+AA  G  D +++L++HGAD +  +  GA
Sbjct: 43   MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGA 102
Query: 1112 TPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLA 1171
             P+ L                    A ++G+   V  L    +++ RDA+G   TPL LA
Sbjct: 103  LPIHL--------------------AVQEGHTAVVSFLAAESDLHRRDARG--LTPLELA 140

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 74/208 (35%), Gaps = 48/208 (23%)
Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA-------LLQHGADINLK 599
           PLH AC  GH    ++L+KHGA VN       TPL  A           LLQHGA +  +
Sbjct: 95  PLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE 154
Query: 600 NTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKM 659
           +       DLA P   A   G     E + +    GG +      LGT            
Sbjct: 155 S-------DLASPIHEAARRG---HVECVNSLIAYGGNIDHKISHLGTP----------- 193
Query: 660 ELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPK 719
                           L  AC     + VKK L S   +       D+PLH  V +   +
Sbjct: 194 ----------------LYLACENQQRACVKKLLESG-ADVNQGKGQDSPLHAVVRTASEE 236
Query: 720 RKAIVESLIRKGAHLNEKNKELLAPIHL 747
              +   L+  GA    KN E   P+ L
Sbjct: 237 LACL---LMDFGADTQAKNAEGKRPVEL 261

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 57/221 (25%)
Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           LLEA+   D   V  +L    + V+  D +G  +TPL+ A   N + + + L+  GAD++
Sbjct: 9   LLEAANQRDTKKVKEILQDTTYQVDEVDTEG--NTPLNIAVHNNDIEIAKALIDRGADIN 66
Query: 463 SKDNATDKWGFTPLHEAAQKGRTQXXXXXXXXXXXXXXXXRELFEACKGGDLTKVKKLVN 522
            +++ +D    +P   A  +GRT+                           L  + K   
Sbjct: 67  LQNSISD----SPYLYAGAQGRTEI--------------------------LAYMLKHAT 96
Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHG-ANVNVADLWKFTPL 581
           P  +N  +  G           L+P   A   GH +  ++L++ G  +++  + + +T L
Sbjct: 97  PD-LNKHNRYG--------GNALIP---AAEKGHIDNVKLLLEDGREDIDFQNDFGYTAL 144
Query: 582 HEAAA------------KALLQHGADINLKNTDGKTALDLA 610
            EA              K L+++GAD ++K+  G+TA+D A
Sbjct: 145 IEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYA 185

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCA-VTSPYPKRKAIVESLIRKG 731
           G+ L  A  +GD  ++   L ++V        G T L    + +P   R+     L+ +G
Sbjct: 6   GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARR-----LLLRG 60
Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           A+ + K++   A IH AA  G LD L TLL   A VN+ D  G   LH  A++   + V 
Sbjct: 61  ANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLAAKEGHLRVVE 120
Query: 792 VLLSHNA 798
            L+ H A
Sbjct: 121 FLVKHTA 127

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCA-VTSPYPKRKAIVESLIRKG 731
           G+ L  A  +GD  ++   L ++V        G T L    + +P   R+     L+ +G
Sbjct: 6   GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARR-----LLLRG 60
Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           A+ + K++   A IH AA  G LD L TLL   A VN+ D  G   LH  A++   + V 
Sbjct: 61  ANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120
Query: 792 VLLSHNA 798
            L+ H A
Sbjct: 121 FLVKHTA 127

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 505 LFEACKGGDLTKVKKLVNP-QTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEML 563
           L  A K   L   +KL++    VN +D +G+            PL  +  +G+ E++  L
Sbjct: 72  LIWAVKNNRLGIAEKLLSKGSNVNTKDFSGK-----------TPLMWSIIFGYSEMSYFL 120
Query: 564 VKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTA 606
           ++HGANVN  +L   TPL  A+        K LL+ GADI+ ++  G TA
Sbjct: 121 LEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTA 170

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 34/192 (17%)
Query: 593 GADINLKNTDGKTALDLAVPCTRAVLSGDHKKEE----LLEAARMMGGGLHRYTWPLGTT 648
           G D+N++  DG T L +A      + +G+ ++EE    ++      G  LH  T   G T
Sbjct: 1   GMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET 60
Query: 649 DIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTP 708
                                      L  A R       K+ L +          G TP
Sbjct: 61  --------------------------ALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 94
Query: 709 LHCAVTSPYPKRKAIVESLIR-KGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKV 767
           LH AV++     + + + LIR +   L+ +  +   P+ LAA L    +L+ L+   A V
Sbjct: 95  LHAAVSA---DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV 151
Query: 768 NLVDVLGQTALH 779
           N VD LG++ALH
Sbjct: 152 NAVDDLGKSALH 163

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 19/156 (12%)
Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           G  D V  LL  GAS+    D    P+H A   GH + V  L+    N + + +   TPL
Sbjct: 80  GSWDCVNLLLQHGASVQPESDLA-SPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPL 138
Query: 62  HEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH-------KDRSCYLA-HGAD 113
           +  A + +   C+     E  +  NQ     G G   P+H       ++ +C L   GAD
Sbjct: 139 Y-LACENQQRACVK-KLLESGADVNQ-----GKGQDSPLHAVARTASEELACLLMDFGAD 191
Query: 114 PFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPS 149
              KN EG+ P++L   E   S L     +  G PS
Sbjct: 192 TQAKNAEGKRPVELVPPE---SPLAQLFLEREGPPS 224

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 6  VVEYLLASGASIHARDD-GGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEA 64
          V+   +  GAS+H + D  G   LH A ++  +D  + LLEA A+ N +DN   TPLH A
Sbjct: 38 VISDFIYQGASLHNQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAA 97
Query: 65 AA 66
           +
Sbjct: 98 VS 99

>pdb|3BLJ|A Chain A, Crystal Structure Of Human Poly(adp-ribose) Polymerase 15, Catalytic Fragment Length = 221

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 12/72 (16%)
Query: 911 SRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGS-----PFINAIVQKGF 965
           S Y I +I+++QN  LW+ Y  ++ ++  +N  + +ER+LFHG+     P++N   Q GF
Sbjct: 61  SSYAIEKIERIQNAFLWQSYQVKKRQMDIKNDHKNNERLLFHGTDADSVPYVN---QHGF 117
Query: 966 DE----RHAIRY 973
           +     ++A+ Y
Sbjct: 118 NRSCAGKNAVSY 129

>pdb|4F0E|A Chain A, Human Adp-Ribosyltransferase 7 (Artd7PARP15), CATALYTIC DOMAIN IN Complex With Sto1102 Length = 200

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 12/72 (16%)
Query: 911 SRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGS-----PFINAIVQKGF 965
           S Y I +I+++QN  LW+ Y  ++ ++  +N  + +ER+LFHG+     P++N   Q GF
Sbjct: 40  SSYAIEKIERIQNAFLWQSYQVKKRQMDIKNDHKNNERLLFHGTDADSVPYVN---QHGF 96
Query: 966 DE----RHAIRY 973
           +     ++A+ Y
Sbjct: 97  NRSCAGKNAVSY 108

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	1236
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-78
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-63
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-40
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-35
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-35
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	9e-29
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-25
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-22
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-22
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-21
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-19
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-18
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-18
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-16
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-13
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-12
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-12
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-12
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-10
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-10
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-08
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-73
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-69
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-60
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-48
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-26
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-24
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-24
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-23
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-23
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-23
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-23
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-22
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-21
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-21
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-21
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-21
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-20
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-20
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-17
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-16
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	6e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-57
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-44
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-42
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-38
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-26
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-26
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-22
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-21
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-18
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-18
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-17
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	6e-16
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-13
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-12
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-09
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-08
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-07
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-48
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	8e-43
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-40
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-40
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-39
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-33
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-28
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-21
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-20
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-19
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	5e-19
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-18
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-17
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-16
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	8e-16
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-15
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-15
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-14
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	5e-14
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	5e-13
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-12
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	8e-05
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-45
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-42
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-40
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	8e-40
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	7e-37
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-24
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-23
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-22
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-20
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-20
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	9e-18
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-17
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	6e-13
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-11
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-08
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	6e-04
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-44
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-42
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	8e-41
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-38
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	6e-35
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-23
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-22
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	7e-21
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-20
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-18
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-17
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-17
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-13
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-12
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-11
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-10
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-04
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-44
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-40
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-30
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-24
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-23
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-21
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-21
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-18
3v30_A	172	DNA-binding protein rfxank; structural genomics co	8e-18
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-17
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-17
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-17
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-16
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-16
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-15
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-12
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-12
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-06
3v30_A	172	DNA-binding protein rfxank; structural genomics co	8e-06
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-43
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-41
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-29
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-23
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-21
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-21
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-20
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-20
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-19
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	9e-18
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-17
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-16
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-15
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	9e-15
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-14
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	5e-12
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-12
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-11
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-07
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	5e-06
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	4e-43
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-41
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-28
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-27
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-24
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-22
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-21
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-20
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-18
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	7e-18
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	7e-18
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-16
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	9e-15
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-13
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	6e-11
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-08
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-07
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-06
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-42
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-33
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-21
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-21
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-21
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-20
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-20
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-19
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-19
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-19
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	9e-17
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-16
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-16
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-16
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-13
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-12
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-11
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-09
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-06
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-04
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-42
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	6e-40
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-24
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-23
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-20
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	6e-20
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-19
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-18
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-18
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-17
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	6e-17
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-17
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-16
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	8e-14
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-14
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-11
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-10
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-05
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-04
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-42
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-35
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-30
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-18
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-18
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-17
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-16
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-16
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-16
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-16
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-15
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-15
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-15
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-15
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-14
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-14
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-14
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-13
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-13
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-12
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-09
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-09
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	8e-08
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-04
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-42
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-33
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	4e-23
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-21
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-21
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-20
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-19
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	8e-19
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	4e-18
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	8e-18
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-17
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-16
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	8e-15
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-14
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-12
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-09
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-08
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-42
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-41
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-34
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	8e-25
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-21
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-21
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-20
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-20
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	6e-20
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	7e-19
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-18
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-18
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	6e-18
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-17
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-17
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-17
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-15
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-14
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	6e-11
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-11
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-10
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-08
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-42
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-35
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-31
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-29
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-22
3hra_A	201	Ankyrin repeat family protein; structural protein;	9e-21
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-20
3hra_A	201	Ankyrin repeat family protein; structural protein;	4e-20
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-17
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-16
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-15
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-14
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-14
3hra_A	201	Ankyrin repeat family protein; structural protein;	4e-13
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-10
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-09
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-06
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	7e-42
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-41
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-33
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-31
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	9e-24
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	8e-23
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-22
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-21
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-19
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-18
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-18
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-17
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-16
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-16
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-15
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-14
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-10
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	8e-08
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-05
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	7e-04
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	9e-42
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-36
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-23
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-21
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-21
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-20
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-20
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-19
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-19
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-18
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-18
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-18
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	5e-18
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-17
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-16
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	9e-16
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-15
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-15
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-15
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	5e-14
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-12
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-10
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-10
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	5e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-05
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-41
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-32
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-21
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-21
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	6e-20
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-19
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-19
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-18
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-18
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-16
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	8e-16
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	8e-16
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-14
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-14
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	6e-14
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	6e-13
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-09
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-07
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-06
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-05
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-41
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-39
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-35
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	9e-24
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	9e-23
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-22
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-21
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-20
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-20
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-20
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-19
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-19
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	9e-18
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-17
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-17
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-17
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-16
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-15
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-15
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-14
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-14
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-13
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-11
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-09
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-05
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-41
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-35
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-24
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-21
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-20
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-20
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	8e-20
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-19
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-19
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-19
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-18
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-18
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-18
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-18
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-15
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-15
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-15
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-14
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-14
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-13
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-12
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-11
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-10
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-09
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	5e-41
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-40
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-40
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-35
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	7e-28
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-23
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	6e-23
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-22
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-21
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	5e-21
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-20
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-20
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-19
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-17
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	9e-17
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-16
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	8e-15
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-14
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	5e-14
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-11
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-11
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	5e-11
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-09
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-08
2rfa_A	232	Transient receptor potential cation channel subfa	8e-41
2rfa_A	232	Transient receptor potential cation channel subfa	6e-33
2rfa_A	232	Transient receptor potential cation channel subfa	1e-21
2rfa_A	232	Transient receptor potential cation channel subfa	1e-21
2rfa_A	232	Transient receptor potential cation channel subfa	2e-18
2rfa_A	232	Transient receptor potential cation channel subfa	9e-18
2rfa_A	232	Transient receptor potential cation channel subfa	3e-17
2rfa_A	232	Transient receptor potential cation channel subfa	7e-17
2rfa_A	232	Transient receptor potential cation channel subfa	8e-17
2rfa_A	232	Transient receptor potential cation channel subfa	2e-16
2rfa_A	232	Transient receptor potential cation channel subfa	1e-15
2rfa_A	232	Transient receptor potential cation channel subfa	2e-15
2rfa_A	232	Transient receptor potential cation channel subfa	2e-13
2rfa_A	232	Transient receptor potential cation channel subfa	3e-13
2rfa_A	232	Transient receptor potential cation channel subfa	1e-12
2rfa_A	232	Transient receptor potential cation channel subfa	2e-11
2rfa_A	232	Transient receptor potential cation channel subfa	2e-07
2rfa_A	232	Transient receptor potential cation channel subfa	2e-04
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-38
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-31
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-30
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-25
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	7e-22
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-20
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-19
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-19
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-18
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	7e-16
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	6e-15
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-11
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	9e-11
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-05
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-04
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-38
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-32
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	6e-26
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-25
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-21
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-20
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-20
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-19
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-19
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-19
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-18
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-17
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-15
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	5e-15
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-14
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-13
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	6e-13
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-11
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	7e-09
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-06
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-37
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-37
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-33
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-30
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-25
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-24
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-23
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-23
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-21
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-21
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-20
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-20
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-19
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-18
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-18
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-18
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-17
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-16
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-16
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-16
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-15
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	9e-13
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-12
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-07
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-07
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-37
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-34
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-30
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	8e-26
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-22
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-21
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-21
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-18
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-17
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-17
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	5e-15
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	9e-15
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-14
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-14
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-13
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-12
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-10
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-09
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-06
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	4e-37
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-28
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	4e-22
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	9e-21
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	9e-21
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-19
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-19
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-18
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	4e-17
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	9e-16
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	5e-13
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	8e-13
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	7e-08
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	7e-07
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	4e-05
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-04
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-36
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-34
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-32
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-22
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-22
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-20
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-19
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-19
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-18
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	8e-18
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-17
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-16
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-15
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-14
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-09
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-04
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-36
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	9e-36
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-25
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-22
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	9e-21
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-19
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-17
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	8e-17
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-15
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-14
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-12
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-11
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	7e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-09
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-06
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-06
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	9e-06
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-36
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-31
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	5e-22
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-19
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-18
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-18
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-18
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-17
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-17
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-16
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	9e-16
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-15
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-14
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-14
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	6e-14
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-13
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-10
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	8e-10
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-04
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	9e-36
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-35
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	7e-22
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-20
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-20
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-18
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	9e-17
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-16
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-16
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-15
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-15
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-14
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-14
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-13
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	7e-11
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-10
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-09
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	7e-09
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	7e-05
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	9e-36
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-28
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-23
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-23
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-22
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-19
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	9e-19
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-18
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-18
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-18
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-17
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-16
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-15
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-13
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	6e-13
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	6e-09
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	9e-09
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-06
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-05
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-05
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	6e-04
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-35
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	7e-35
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-30
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-29
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-27
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-23
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-21
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	7e-19
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-16
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-11
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-10
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-07
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	8e-06
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-04
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	4e-35
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	8e-30
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-23
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	7e-23
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-22
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-19
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-17
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-17
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-17
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	8e-16
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-15
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-13
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-12
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	6e-11
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	7e-08
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-04
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	5e-04
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	8e-35
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-33
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-29
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-26
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-22
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-20
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-19
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-19
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-19
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-18
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-18
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-18
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-17
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-15
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-15
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-14
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-13
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-10
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-08
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-34
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-31
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-28
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-23
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	5e-22
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-20
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	7e-19
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-19
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-18
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-16
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	7e-16
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-15
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-14
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	7e-13
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-10
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	5e-10
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-08
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-07
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-06
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-04
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	7e-34
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	5e-33
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	7e-29
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-23
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-22
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-20
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-20
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-20
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-18
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-18
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	9e-15
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-11
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-07
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-05
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-33
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-25
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-22
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-22
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-20
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	8e-20
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-19
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-17
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-17
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-16
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-15
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-13
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	9e-12
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-09
2etb_A	256	Transient receptor potential cation channel subfam	3e-32
2etb_A	256	Transient receptor potential cation channel subfam	2e-22
2etb_A	256	Transient receptor potential cation channel subfam	7e-21
2etb_A	256	Transient receptor potential cation channel subfam	2e-18
2etb_A	256	Transient receptor potential cation channel subfam	2e-18
2etb_A	256	Transient receptor potential cation channel subfam	1e-16
2etb_A	256	Transient receptor potential cation channel subfam	4e-15
2etb_A	256	Transient receptor potential cation channel subfam	4e-15
2etb_A	256	Transient receptor potential cation channel subfam	9e-15
2etb_A	256	Transient receptor potential cation channel subfam	1e-14
2etb_A	256	Transient receptor potential cation channel subfam	2e-14
2etb_A	256	Transient receptor potential cation channel subfam	3e-14
2etb_A	256	Transient receptor potential cation channel subfam	8e-11
2etb_A	256	Transient receptor potential cation channel subfam	3e-10
2etb_A	256	Transient receptor potential cation channel subfam	8e-09
2etb_A	256	Transient receptor potential cation channel subfam	4e-08
2etb_A	256	Transient receptor potential cation channel subfam	9e-08
2etb_A	256	Transient receptor potential cation channel subfam	8e-05
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	6e-32
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-27
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-23
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-21
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	6e-18
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-17
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	5e-16
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-15
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	5e-13
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-12
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-12
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	8e-12
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	8e-12
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-11
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-11
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-10
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-10
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	8e-09
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-05
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-04
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	8e-31
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-28
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-22
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-20
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-20
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-19
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-19
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-18
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-16
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-16
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	5e-16
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-13
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-11
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-09
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	7e-07
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-04
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-04
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-30
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	8e-30
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	7e-28
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-21
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-20
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-20
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-20
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-16
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-15
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	6e-12
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	8e-08
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-04
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	6e-04
3u9h_A	240	Tankyrase-2; protein-ligand complex, diphtheria to	1e-29
3u9h_A	240	Tankyrase-2; protein-ligand complex, diphtheria to	8e-13
3u9h_A	240	Tankyrase-2; protein-ligand complex, diphtheria to	7e-04
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-29
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-26
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	8e-23
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-22
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-19
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	6e-19
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-18
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	6e-18
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-17
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-16
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	8e-15
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-14
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-09
2pnn_A	273	Transient receptor potential cation channel subfa	3e-29
2pnn_A	273	Transient receptor potential cation channel subfa	1e-28
2pnn_A	273	Transient receptor potential cation channel subfa	7e-26
2pnn_A	273	Transient receptor potential cation channel subfa	9e-22
2pnn_A	273	Transient receptor potential cation channel subfa	4e-20
2pnn_A	273	Transient receptor potential cation channel subfa	4e-18
2pnn_A	273	Transient receptor potential cation channel subfa	8e-18
2pnn_A	273	Transient receptor potential cation channel subfa	5e-17
2pnn_A	273	Transient receptor potential cation channel subfa	4e-16
2pnn_A	273	Transient receptor potential cation channel subfa	6e-15
2pnn_A	273	Transient receptor potential cation channel subfa	3e-12
2pnn_A	273	Transient receptor potential cation channel subfa	5e-12
2pnn_A	273	Transient receptor potential cation channel subfa	2e-10
2pnn_A	273	Transient receptor potential cation channel subfa	4e-10
2pnn_A	273	Transient receptor potential cation channel subfa	7e-09
2pnn_A	273	Transient receptor potential cation channel subfa	2e-08
2pnn_A	273	Transient receptor potential cation channel subfa	4e-06
2pnn_A	273	Transient receptor potential cation channel subfa	4e-04
2pnn_A	273	Transient receptor potential cation channel subfa	9e-04
3jxi_A	260	Vanilloid receptor-related osmotically activated p	5e-29
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-28
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-20
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-15
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-15
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-15
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-14
3jxi_A	260	Vanilloid receptor-related osmotically activated p	7e-14
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-12
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-11
3jxi_A	260	Vanilloid receptor-related osmotically activated p	9e-10
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-09
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-09
3jxi_A	260	Vanilloid receptor-related osmotically activated p	7e-07
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-05
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-04
3jxi_A	260	Vanilloid receptor-related osmotically activated p	7e-04
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	4e-24
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-22
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	8e-21
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-19
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-15
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-14
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-12
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	6e-12
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-11
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-10
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-10
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-09
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-08
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	4e-08
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-05
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-24
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-22
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-22
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-19
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-18
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-18
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-17
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-16
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	8e-16
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-13
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	8e-12
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	9e-10
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-09
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	5e-23
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-22
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-21
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-17
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-16
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-15
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-14
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	5e-14
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	6e-12
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-09
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-07
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	5e-06
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	5e-04
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	9e-21
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-20
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-19
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	7e-19
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-17
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-16
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	8e-16
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-15
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-15
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-14
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-13
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-10
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-09
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-07
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-07
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-06
3smj_A	193	Poly [ADP-ribose] polymerase 14; diphtheria toxin	2e-18
3hkv_A	217	PARP-10, poly [ADP-ribose] polymerase 10; NAD, tra	4e-18
3blj_A	221	Poly(ADP-ribose) polymerase 15; PARP, BAL-3, SGC,	6e-17
3blj_A	221	Poly(ADP-ribose) polymerase 15; PARP, BAL-3, SGC,	4e-04
2pqf_A	198	Poly [ADP-ribose] polymerase 12; enzyme-inhibitor	8e-15
2pqf_A	198	Poly [ADP-ribose] polymerase 12; enzyme-inhibitor	2e-06
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	7e-14
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	8e-13
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	7e-12
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	9e-11
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	5e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	8e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-06
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	6e-06
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-05
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-05
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-05
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-13
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-10
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-08
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-08
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-08
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-06
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-06
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	9e-06
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-05
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-04
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-12
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	7e-12
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	5e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	5e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	8e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	9e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	4e-07
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	6e-06
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-05
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	9e-05
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	4e-04
2x5y_A	173	Zinc finger CCCH-type antiviral protein 1; antivir	2e-12
2x5y_A	173	Zinc finger CCCH-type antiviral protein 1; antivir	1e-04
3k1r_B	74	Usher syndrome type-1G protein; protein-protein co	2e-11
2ean_A	83	Connector enhancer of kinase suppressor of RAS 2;	2e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
2e8o_A	103	SAM domain and HD domain-containing protein 1; cel	2e-09
2f3n_A	76	SH3 and multiple ankyrin repeat domains 3; postsyn	3e-09
3bs5_B	80	Connector enhancer of kinase suppressor of RAS 2;	3e-09
2kg5_A	100	ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-	6e-09
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	8e-09
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-08
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	8e-07
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-05
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-05
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	8e-05
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-04
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	9e-04
2gle_A	74	Neurabin-1; SAM domain, scaffold, protein protein	1e-08
1x40_A	91	ARAP2; ASAP-related protein2, GTPase activity, sig	2e-08
3bq7_A	81	Diacylglycerol kinase delta; SAM domain, polymeriz	2e-08
1b0x_A	94	Protein (EPHA4 receptor tyrosine kinase); protein	2e-08
1ucv_A	81	Ephrin type-A receptor 8; receptor oligomerization	4e-08
2qkq_A	83	Ephrin type-B receptor 4; ATP-binding, glycoprotei	7e-08
2d3d_A	88	VTS1 protein; RNA binding, SAM domain, SRE hairpin	8e-08
3h8m_A	90	Ephrin type-A receptor 7; SAM domain, kinase,struc	8e-08
2eao_A	99	Ephrin type-B receptor 1; cell-free protein synthe	8e-08
2b6g_A	119	VTS1P; alpha-helix, pentaloop, hairpin, RNA bindin	1e-07
2es6_A	101	VTS1P; SAM domain, protein structure, gene regulat	2e-07
1b4f_A	82	EPHB2; SAM domain, EPH receptor, signal transducti	2e-07
2e8n_A	88	Ephrin type-A receptor 2; cell-free protein synthe	2e-07
3hil_A	82	Ephrin type-A receptor 1; ATP-binding, kinase, nuc	4e-07
3kka_C	86	Ephrin type-A receptor 2; ATP-binding, kinase, nuc	7e-07
2kso_A	82	Ephrin type-A receptor 2; SAM domain, heterodimer,	1e-06
2k4p_A	86	Phosphatidylinositol-3,4,5-trisphosphate 5- phosph	1e-06
3bs7_A	78	Protein aveugle; sterIle alpha motif (SAM) domain,	2e-06
1wwv_A	91	Connector enhancer of kinase suppressor of RAS 1;	2e-06
2eam_A	80	Putative 47 kDa protein; cell-free protein synthes	2e-06
4dqy_C	506	Poly [ADP-ribose] polymerase 1; PARP, poly(ADP-rib	2e-06
3sei_A	149	Caskin-1; SAM domain, protein-protein interaction,	4e-06
3bs5_A	106	Protein aveugle; sterIle alpha motif, SAM domain,	4e-06
1efy_A	350	Poly (ADP-ribose) polymerase; benzimidazole, inhib	5e-06
1v38_A	78	SAM-domain protein samsn-1; structural genomics, h	6e-06
3c4h_A	357	Poly(ADP-ribose) polymerase 3; enzyme-inhibitor co	9e-06
3c4h_A	357	Poly(ADP-ribose) polymerase 3; enzyme-inhibitor co	5e-04
3kjd_A	368	Poly [ADP-ribose] polymerase 2; transferase, enzym	2e-05
1ow5_A	85	Serine/threonine-protein kinase STE11; MAP kinase,	2e-05
2ke7_A	103	Ankyrin repeat and sterIle alpha motif domain- con	2e-05
2lmr_A	101	ODIN, ankyrin repeat and SAM domain-containing pro	4e-04

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  262 bits (671), Expect = 1e-78
 Identities = 141/385 (36%), Positives = 189/385 (49%), Gaps = 101/385 (26%)

Query: 426 VNCRDLDGRHSTPLHFAAGY-NRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGR 484
                   +    L  AA   N   ++  L     +     +A+D    TPLH AA   R
Sbjct: 17  AVLTGEYKK--DELLEAARSGNEEKLMALLTPLNVNC----HASDGRKSTPLHLAAGYNR 70

Query: 485 TQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAG 544
            ++  LL L                 G D            V+A+D  G           
Sbjct: 71  VRIVQLL-LQ---------------HGAD------------VHAKDKGGL---------- 92

Query: 545 LVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADIN 597
            VPLHNACSYGHYEVTE+L+KHGA VN  DLW+FTPLHEAA          LL HGAD  
Sbjct: 93  -VPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT 151

Query: 598 LKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCC 657
           L N  GK+A+D+A        + + ++                                 
Sbjct: 152 LVNCHGKSAVDMAP-------TPELRE--------------------------------- 171

Query: 658 KMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPY 717
                   R+  EFKGH LL+A R+ D ++VKK L  +++NFK P + +T LHCAV S +
Sbjct: 172 --------RLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLH 223

Query: 718 PKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTA 777
           PKRK + E L+RKGA++NEKNK+ + P+H+AA+  H DV++ L + GAK+N +D LGQTA
Sbjct: 224 PKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTA 283

Query: 778 LHRTARDDKTQAVRVLLSHNADTSI 802
           LHR A     Q  R+LLS+ +D SI
Sbjct: 284 LHRAALAGHLQTCRLLLSYGSDPSI 308

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  218 bits (558), Expect = 2e-63
 Identities = 136/374 (36%), Positives = 168/374 (44%), Gaps = 115/374 (30%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           GLVPLHNACSYGH+EVTE+L+K GA VNAMDLWQFTPLHEAASK+R+EVCSLLLS GADP
Sbjct: 91  GLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP 150

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT 333
           TL NCH KSA+D+APT EL++RL+ EFKGH LL+A R+ D ++VKK L  +++NFK P +
Sbjct: 151 TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210

Query: 334 GDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEP 393
            +T L                       A    H    Q                     
Sbjct: 211 HETAL---------------------HCAVASLHPKRKQ--------------------- 228

Query: 394 PSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEY 453
             V +L   LL   KG +              VN ++ D    TPLH AA      V+E 
Sbjct: 229 --VAEL---LL--RKGAN--------------VNEKNKDFM--TPLHVAAERAHNDVMEV 265

Query: 454 LLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGD 513
           L  HGA +    NA D  G T LH AA  G  Q   LL LS                G D
Sbjct: 266 LHKHGAKM----NALDSLGQTALHRAALAGHLQTCRLL-LS---------------YGSD 305

Query: 514 LTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVA 573
                        +     G   T                    E  + ++     +  +
Sbjct: 306 ------------PSIISLQGF--TAAQMGN--------------EAVQQILSESTPMRTS 337

Query: 574 DLWKFTPLHEAAAK 587
           D      L EA+  
Sbjct: 338 D--VDYRLLEASKA 349

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  151 bits (385), Expect = 3e-40
 Identities = 50/239 (20%), Positives = 85/239 (35%), Gaps = 60/239 (25%)

Query: 375 GYTALQVAGENSKKLLQEPPSVVDLESQ---LLEASKGGDMTVVTRLLSSCPHIVNCRDL 431
           G +A+ +A     +        +  E +   LL+A++  D+  V + L+        +  
Sbjct: 157 GKSAVDMAPTPELR------ERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFK-QPQ 209

Query: 432 DGRHSTPLHFAAG---YNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLS 488
                T LH A       R  V E LL  GA+V    N  +K   TPLH AA++    + 
Sbjct: 210 SHE--TALHCAVASLHPKRKQVAELLLRKGANV----NEKNKDFMTPLHVAAERAHNDVM 263

Query: 489 ALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPL 548
            +L                   G              +NA D+ G+  T LH AA     
Sbjct: 264 EVL-HK---------------HGAK------------MNALDSLGQ--TALHRAA----- 288

Query: 549 HNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA--AKALLQHGADINLKNTDGKT 605
                 GH +   +L+ +G++ ++  L  FT         + +L     +   + D + 
Sbjct: 289 ----LAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSESTPMRTSDVDYRL 343

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  138 bits (350), Expect = 1e-35
 Identities = 65/237 (27%), Positives = 86/237 (36%), Gaps = 73/237 (30%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           LLEA++ G+   +  LL+      +  D      TPLH AAGYNRV +V+ LL HGADV 
Sbjct: 28  LLEAARSGNEEKLMALLTPLNVNCHASDGRKS--TPLHLAAGYNRVRIVQLLLQHGADV- 84

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              +A DK G  PLH A   G  +++ LL L                 G           
Sbjct: 85  ---HAKDKGGLVPLHNACSYGHYEVTELL-LK---------------HGAC--------- 116

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              VNA D      TPLH AA         S    EV  +L+ HGA+  + +    + + 
Sbjct: 117 ---VNAMDLWQF--TPLHEAA---------SKNRVEVCSLLLSHGADPTLVNCHGKSAVD 162

Query: 583 EAA----------------------------AKALLQHGADINLKNTDGKTALDLAV 611
            A                              K  L        +    +TAL  AV
Sbjct: 163 MAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAV 219

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  138 bits (350), Expect = 1e-35
 Identities = 53/244 (21%), Positives = 83/244 (34%), Gaps = 69/244 (28%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L EA+    + V + LLS         +  G+  + +  A        + Y     + + 
Sbjct: 128 LHEAASKNRVEVCSLLLSHGADP-TLVNCHGK--SAVDMAPTPELRERLTYEFKGHSLLQ 184

Query: 463 S-----------------KDNATDKWGFTPLHEAAQKG---RTQLSALLPLSPSAANDPL 502
           +                  +    +   T LH A       R Q++ LL L         
Sbjct: 185 AAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELL-LR-------- 235

Query: 503 RELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEM 562
                  KG +            VN ++      TPLH AA            H +V E+
Sbjct: 236 -------KGAN------------VNEKNKDFM--TPLHVAA---------ERAHNDVMEV 265

Query: 563 LVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTR 615
           L KHGA +N  D    T LH AA        + LL +G+D ++ +  G TA  +     +
Sbjct: 266 LHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQ 325

Query: 616 AVLS 619
            +LS
Sbjct: 326 QILS 329

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  118 bits (298), Expect = 9e-29
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +KHGA VN  DLW+FTPLHEAA+K + ++  LLL HGADP+  N  G + +D+      +
Sbjct: 111  LKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELR 170

Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLLT--ADNINCRDAQGRNSTPLHLAA 1172
            +         +LL AA++ +L +V+K L     N   +       T LH A 
Sbjct: 171  ERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFK-QPQSHE--TALHCAV 219

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  108 bits (273), Expect = 1e-25
 Identities = 52/127 (40%), Positives = 67/127 (52%), Gaps = 31/127 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           Y R  +V+ LL  GA +HA+D GGL PLHNACS+GH +V  LLL+  A  N  D W FTP
Sbjct: 68  YNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTP 127

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAA+K + +VC                               S  L+HGADP L N  
Sbjct: 128 LHEAASKNRVEVC-------------------------------SLLLSHGADPTLVNCH 156

Query: 121 GQTPLDL 127
           G++ +D+
Sbjct: 157 GKSAVDM 163

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 99.9 bits (250), Expect = 1e-22
 Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 32/138 (23%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
             RK V E LL  GA+++ ++   + PLH A    H DV+ +L +  A  N  D+   T 
Sbjct: 224 PKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTA 283

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH AA  G    C                                  L++G+DP + + +
Sbjct: 284 LHRAALAGHLQTC-------------------------------RLLLSYGSDPSIISLQ 312

Query: 121 GQTPLDLTVAEDVRSLLQ 138
           G T   +   E V+ +L 
Sbjct: 313 GFTAAQMG-NEAVQQILS 329

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 98.0 bits (245), Expect = 5e-22
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 16/123 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
                 N + +D  K TPLH AA   +  IV+LLLQHGAD   K++ G  PL      G  
Sbjct: 45   TPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHY 104

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            +V++LL               + L +AA K  +     LL+   +    +  G+  + + 
Sbjct: 105  EVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGK--SAVD 162

Query: 1170 LAA 1172
            +A 
Sbjct: 163  MAP 165

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 95.6 bits (239), Expect = 3e-21
 Identities = 30/132 (22%), Positives = 43/132 (32%), Gaps = 24/132 (18%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           YG  +V E LL  GA ++A D     PLH A S    +V  LLL   A+P   +    + 
Sbjct: 101 YGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSA 160

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH-------KDRSCYLAHGAD 113
           +  A      +                  Y   G +   +              LA    
Sbjct: 161 VDMAPTPELRER------LT---------YEFKGHS--LLQAAREADLAKVKKTLALEII 203

Query: 114 PFLKNQEGQTPL 125
            F + Q  +T L
Sbjct: 204 NFKQPQSHETAL 215

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 89.1 bits (222), Expect = 6e-19
 Identities = 45/223 (20%), Positives = 69/223 (30%), Gaps = 48/223 (21%)

Query: 579 TPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK-EELLEAARMMGGG 637
           + L       L    A   L     K  L        A  SG+ +K   LL         
Sbjct: 6   SALD------LADPSAKAVLTGEYKKDEL------LEAARSGNEEKLMALLT-------- 45

Query: 638 LHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV- 696
                 PL   +                   D  K   L  A        V+  L     
Sbjct: 46  ------PLNV-NC---------------HASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD 83

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
           V+ K    G  PLH A +        + E L++ GA +N  +     P+H AA    ++V
Sbjct: 84  VHAKDKG-GLVPLHNACSY---GHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEV 139

Query: 757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
              LL  GA   LV+  G++A+      +  + +      ++ 
Sbjct: 140 CSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSL 182

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 88.3 bits (220), Expect = 1e-18
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 23/117 (19%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            ++ GANVN  +    TPLH AA +   D++ +L +HGA  +  +  G T L         
Sbjct: 234  LRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHR------- 286

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLL 1179
                         AA  G+L   + LL+   + +    QG   T   +     + +L
Sbjct: 287  -------------AALAGHLQTCRLLLSYGSDPSIISLQGF--TAAQMGNEAVQQIL 328

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 86.4 bits (215), Expect = 5e-18
 Identities = 29/124 (23%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKG-KADIVRLLLQHGADPSKKNRDGATPLDL-VREGD 1121
                A   +   +K   L EAA  G +  ++ LL     +    +   +TPL L      
Sbjct: 11   ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNR 70

Query: 1122 QDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPL 1168
              +  LL             G   L +A   G+    + LL     +N  D      TPL
Sbjct: 71   VRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQF--TPL 128

Query: 1169 HLAA 1172
            H AA
Sbjct: 129  HEAA 132

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 80.6 bits (200), Expect = 3e-16
 Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 12/88 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLD-------- 1115
             KHGA +N  D    T LH AA  G     RLLL +G+DPS  +  G T           
Sbjct: 267  HKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQ 326

Query: 1116 LVREG-DQDVSDLLRGNSALLDAAKKGN 1142
            ++ E      SD    +  LL+A+K G+
Sbjct: 327  ILSESTPMRTSD---VDYRLLEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 71.8 bits (177), Expect = 3e-13
 Identities = 25/126 (19%), Positives = 38/126 (30%), Gaps = 34/126 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHAD-VVRLLLEADANPNTRDNWNFT 59
           +G+      L    A      +     L  A   G+ + ++ LL   + N +  D    T
Sbjct: 3   FGK--SALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKST 60

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
           PLH AA   +  +                                   L HGAD   K++
Sbjct: 61  PLHLAAGYNRVRIV-------------------------------QLLLQHGADVHAKDK 89

Query: 120 EGQTPL 125
            G  PL
Sbjct: 90  GGLVPL 95

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 69.4 bits (171), Expect = 1e-12
 Identities = 26/146 (17%), Positives = 38/146 (26%), Gaps = 49/146 (33%)

Query: 1   YGRKDVVEYLLASGASIHARDDGG---LH------------------PLHNACSFGHADV 39
             R +V   LL+ GA     +  G   +                    L  A        
Sbjct: 134 KNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAK 193

Query: 40  VRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCP 99
           V+  L  +     +   + T LH A A         +  AE                   
Sbjct: 194 VKKTLALEIINFKQPQSHETALHCAVASLHPK-RKQV--AE------------------- 231

Query: 100 MHKDRSCYLAHGADPFLKNQEGQTPL 125
                   L  GA+   KN++  TPL
Sbjct: 232 ------LLLRKGANVNEKNKDFMTPL 251

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 68.3 bits (168), Expect = 3e-12
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 217 PLHNACSYGHF-EVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            L  A   G+  ++  +L     N +A D  + TPLH AA  +R+ +  LLL  GAD
Sbjct: 27  ELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD 83

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 67.9 bits (167), Expect = 4e-12
 Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 7/68 (10%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G       LL+ G+        G             + V+ +L       T D      
Sbjct: 290 AGHLQTCRLLLSYGSDPSIISLQGFTAAQMG-----NEAVQQILSESTPMRTSD--VDYR 342

Query: 61  LHEAAAKG 68
           L EA+  G
Sbjct: 343 LLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 63.7 bits (156), Expect = 1e-10
 Identities = 13/66 (19%), Positives = 20/66 (30%), Gaps = 9/66 (13%)

Query: 555 GHY-EVTEMLVKHGANVNVADLWKFTPLHEAAA--------KALLQHGADINLKNTDGKT 605
           G + +    L    A   +   +K   L EAA           L     + +  +    T
Sbjct: 1   GEFGKSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKST 60

Query: 606 ALDLAV 611
            L LA 
Sbjct: 61  PLHLAA 66

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 61.4 bits (150), Expect = 7e-10
 Identities = 39/209 (18%), Positives = 58/209 (27%), Gaps = 54/209 (25%)

Query: 218 LHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKS---RLEVCSLLLSEGADPT 274
           L  A         +  +              T LH A +     R +V  LLL +GA+  
Sbjct: 182 LLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVN 241

Query: 275 LHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYT 333
             N    +                      L  A  +     ++        +N      
Sbjct: 242 EKNKDFMTP---------------------LHVAAERAHNDVMEVLHKHGAKMNALDSL- 279

Query: 334 GDTPLPGTLLIDLLSDDKEFITVAEEMQATVR---------EHRDNGQSGGYTALQVAGE 384
           G T L                        T R                  G+TA Q+  E
Sbjct: 280 GQTAL--------------HRAALAGHLQTCRLLLSYGSDPSIISL---QGFTAAQMGNE 322

Query: 385 NSKKLLQE--PPSVVDLESQLLEASKGGD 411
             +++L E  P    D++ +LLEASK GD
Sbjct: 323 AVQQILSESTPMRTSDVDYRLLEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 56.0 bits (136), Expect = 4e-08
 Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 8/72 (11%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G T LH A  +           L+  G+  +  + +      +  +         +L   
Sbjct: 280 GQTALHRAALA---GHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQ-----ILSES 331

Query: 765 AKVNLVDVLGQT 776
             +   DV  + 
Sbjct: 332 TPMRTSDVDYRL 343

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 50.2 bits (121), Expect = 2e-06
 Identities = 22/87 (25%), Positives = 28/87 (32%), Gaps = 24/87 (27%)

Query: 1092 IVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLT 1151
                L    A            L                    L+AA+ GN  ++  LLT
Sbjct: 6    SALDLADPSAKAVLTGEYKKDEL--------------------LEAARSGNEEKLMALLT 45

Query: 1152 AD--NINCRDAQGRNSTPLHLAAGEKR 1176
                N +  D +    TPLHLAAG  R
Sbjct: 46   PLNVNCHASDGRKS--TPLHLAAGYNR 70

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 45.6 bits (109), Expect = 7e-05
 Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 2/50 (4%)

Query: 225 GHF-EVTEMLIKAGANVNAMDLWQFTPLHEAASKS-RLEVCSLLLSEGAD 272
           G F +    L    A       ++   L EAA      ++ +LL     +
Sbjct: 1   GEFGKSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVN 50

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  251 bits (643), Expect = 1e-73
 Identities = 131/599 (21%), Positives = 179/599 (29%), Gaps = 196/599 (32%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           GL PLH A   GH  + + L++ GA+ N  ++   TPLH AA     EV   LL   A  
Sbjct: 14  GLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 73

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT 333
                  ++                      L  A R G           ++V       
Sbjct: 74  NAKAKDDQTP---------------------LHCAARIGHT---------NMVK------ 97

Query: 334 GDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEP 393
                   LL++  ++                         G+T L +A           
Sbjct: 98  --------LLLENNAN---------------PNLATT---AGHTPLHIAAREGHV----- 126

Query: 394 PSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEY 453
              V     LL   K                   C    G   TPLH AA Y +V V E 
Sbjct: 127 -ETVLA---LL--EKEAS--------------QACMTKKGF--TPLHVAAKYGKVRVAEL 164

Query: 454 LLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGD 513
           LL   A      NA  K G TPLH A       +  LL L                +GG 
Sbjct: 165 LLERDAHP----NAAGKNGLTPLHVAVHHNNLDIVKLL-LP---------------RGGS 204

Query: 514 LTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVA 573
                        ++    G   TPLH AA              EV   L+++G + N  
Sbjct: 205 ------------PHSPAWNGY--TPLHIAA---------KQNQVEVARSLLQYGGSANAE 241

Query: 574 DLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK-- 624
            +   TPLH AA          LL   A+ NL N  G T L L            H    
Sbjct: 242 SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVA-------QEGHVPVA 294

Query: 625 EELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGD 684
           + L++     G  +                                     L  A   G+
Sbjct: 295 DVLIKH----GVMVD---------------------------ATTRMGYTPLHVASHYGN 323

Query: 685 PSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLA 743
              VK  L     VN K    G +PLH A          IV  L++ GA  NE + +   
Sbjct: 324 IKLVKFLLQHQADVNAKT-KLGYSPLHQAAQQ---GHTDIVTLLLKNGASPNEVSSDGTT 379

Query: 744 PIHLAADLGHLDVLDTLLRL---GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           P+ +A  LG++ V D L  +    + V + D    +             V  +L  + D
Sbjct: 380 PLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPE---------TVDEILDVSED 429

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  238 bits (609), Expect = 4e-69
 Identities = 128/617 (20%), Positives = 189/617 (30%), Gaps = 196/617 (31%)

Query: 237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRL 296
           G +         TPLH A+    L +   LL  GA P + N   ++              
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETP------------- 50

Query: 297 SNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITV 356
                   L  A R G           +V  +                 LL +       
Sbjct: 51  --------LHMAARAGHT---------EVAKY-----------------LLQNK------ 70

Query: 357 AEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVT 416
                A V   +        T L  A            ++V L   LL      +     
Sbjct: 71  -----AKV-NAKAK---DDQTPLHCAARIGHT------NMVKL---LL--ENNAN----- 105

Query: 417 RLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPL 476
                     N     G   TPLH AA    V  V  LL   A          K GFTPL
Sbjct: 106 ---------PNLATTAGH--TPLHIAAREGHVETVLALLEKEASQ----ACMTKKGFTPL 150

Query: 477 HEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKS 536
           H AA+ G+ +++ LL L                +                NA    G   
Sbjct: 151 HVAAKYGKVRVAELL-LE---------------RDAH------------PNAAGKNGL-- 180

Query: 537 TPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKAL 589
           TPLH A           + + ++ ++L+  G + +      +TPLH AA       A++L
Sbjct: 181 TPLHVAV---------HHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 231

Query: 590 LQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK--EELLEA-ARMMGGGLHRYTWPLG 646
           LQ+G   N ++  G T L LA           H +    LL   A               
Sbjct: 232 LQYGGSANAESVQGVTPLHLAA-------QEGHAEMVALLLSKQA--------------- 269

Query: 647 TTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTG 705
             +                 + ++     L    ++G        +   V V+      G
Sbjct: 270 --NGN---------------LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRM-G 311

Query: 706 DTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGA 765
            TPLH A          +V+ L++  A +N K K   +P+H AA  GH D++  LL+ GA
Sbjct: 312 YTPLHVASHY---GNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGA 368

Query: 766 KVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFE 825
             N V   G T L    R        VL     +TS V +    S    +     ++   
Sbjct: 369 SPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLV----SDKHRMSFPETVDEI- 423

Query: 826 REQITLDILAEMNHEDL 842
                LD+  +   E +
Sbjct: 424 -----LDVSEDEGEELI 435

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  211 bits (539), Expect = 9e-60
 Identities = 98/405 (24%), Positives = 140/405 (34%), Gaps = 113/405 (27%)

Query: 406 ASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD 465
            S G                       G   TPLH A+    + +V+ LL  GA      
Sbjct: 1   GSPGIS--------------GGGGGESGL--TPLHVASFMGHLPIVKNLLQRGASP---- 40

Query: 466 NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQT 525
           N ++    TPLH AA+ G T+++  L L                                
Sbjct: 41  NVSNVKVETPLHMAARAGHTEVAKYL-LQ---------------NKAK------------ 72

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
           VNA+    +  TPLH AA           GH  + ++L+++ AN N+A     TPLH AA
Sbjct: 73  VNAKAKDDQ--TPLHCAA---------RIGHTNMVKLLLENNANPNLATTAGHTPLHIAA 121

Query: 586 -------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK--EELLEA-ARMMG 635
                    ALL+  A        G T L +A             +  E LLE  A    
Sbjct: 122 REGHVETVLALLEKEASQACMTKKGFTPLHVAA-------KYGKVRVAELLLERDAHPNA 174

Query: 636 GGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSD 695
            G +  T PL                            H    A    +   VK  L   
Sbjct: 175 AGKNGLT-PL----------------------------HV---AVHHNNLDIVKLLLPRG 202

Query: 696 V-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHL 754
              +    + G TPLH A       +  +  SL++ G   N ++ + + P+HLAA  GH 
Sbjct: 203 GSPHSPA-WNGYTPLHIAAKQ---NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHA 258

Query: 755 DVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           +++  LL   A  NL +  G T LH  A++       VL+ H   
Sbjct: 259 EMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM 303

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  176 bits (449), Expect = 7e-48
 Identities = 88/393 (22%), Positives = 129/393 (32%), Gaps = 112/393 (28%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
           PLH A  YG   V E+L++  A+ NA      TPLH A   + L++  LLL  G  P   
Sbjct: 149 PLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSP 208

Query: 277 NCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGD 335
             +  +                      L  A +Q      +  L      N +    G 
Sbjct: 209 AWNGYTP---------------------LHIAAKQNQVEVARSLLQYGGSANAESVQ-GV 246

Query: 336 TPLPGTLLIDLLSDDKEFITVAE---EMQATVREHRDNGQSGGYTALQVAGENSKKLLQE 392
           TPL        L+  +    +       QA      +     G T L +  +        
Sbjct: 247 TPL-------HLAAQEGHAEMVALLLSKQANG-NLGNKS---GLTPLHLVAQEGHV---- 291

Query: 393 PPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVE 452
              V D+   L+    G                V+     G   TPLH A+ Y  + +V+
Sbjct: 292 --PVADV---LI--KHGVM--------------VDATTRMGY--TPLHVASHYGNIKLVK 328

Query: 453 YLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGG 512
           +LL H ADV    NA  K G++PLH+AAQ+G T +  LL L                 G 
Sbjct: 329 FLLQHQADV----NAKTKLGYSPLHQAAQQGHTDIVTLL-LK---------------NGA 368

Query: 513 DLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEML---VKHGAN 569
                         N   + G   TPL  A            G+  VT++L       + 
Sbjct: 369 S------------PNEVSSDGT--TPLAIAK---------RLGYISVTDVLKVVTDETSF 405

Query: 570 VNVADLWKFTPLHEAAAKALLQHGADINLKNTD 602
           V V+D  + +         +L    D   +   
Sbjct: 406 VLVSDKHRMSFPE--TVDEILDVSEDEGEELIS 436

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  111 bits (281), Expect = 5e-26
 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 17/131 (12%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +  G + +      +TPLH AA + + ++ R LLQ+G   + ++  G TPL L  +EG  
Sbjct: 199  LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHA 258

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            ++  LL             G + L   A++G++     L+     ++     G   TPLH
Sbjct: 259  EMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGY--TPLH 316

Query: 1170 LAAGEKRHLLM 1180
            +A+    ++ +
Sbjct: 317  VAS-HYGNIKL 326

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  107 bits (271), Expect = 1e-24
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 31/127 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G   V + L+  G  + A    G  PLH A  +G+  +V+ LL+  A+ N +    ++P
Sbjct: 288 EGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSP 347

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH+AA +G TD+                +                  L +GA P   + +
Sbjct: 348 LHQAAQQGHTDIV-------------TLL------------------LKNGASPNEVSSD 376

Query: 121 GQTPLDL 127
           G TPL +
Sbjct: 377 GTTPLAI 383

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  106 bits (268), Expect = 2e-24
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 28/155 (18%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           YG+  V E LL   A  +A    GL PLH A    + D+V+LLL    +P++     +TP
Sbjct: 156 YGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTP 215

Query: 61  LHEAAAKGKTDVC-----IGIYFAEHSSKSNQYVYGIGGGTGCPMH-------KDRSCYL 108
           LH AA + + +V       G      +++S Q      G T  P+H        +    L
Sbjct: 216 LHIAAKQNQVEVARSLLQYG---GSANAESVQ------GVT--PLHLAAQEGHAEMVALL 264

Query: 109 -AHGADPFLKNQEGQTPLDLTVAED----VRSLLQ 138
            +  A+  L N+ G TPL L   E        L++
Sbjct: 265 LSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK 299

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  103 bits (260), Expect = 2e-23
 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 16/123 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +++ A VN       TPLH AA  G  ++V+LLL++ A+P+     G TPL +  REG  
Sbjct: 67   LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV 126

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            +    L            +G + L  AAK G +   + LL  D + N     G   TPLH
Sbjct: 127  ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGL--TPLH 184

Query: 1170 LAA 1172
            +A 
Sbjct: 185  VAV 187

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  103 bits (259), Expect = 3e-23
 Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 17/133 (12%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++  A+        FTPLH AA  GK  +  LLL+  A P+   ++G TPL + V   + 
Sbjct: 133  LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL 192

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            D+  LL             G + L  AAK+  +   + LL    + N    QG   TPLH
Sbjct: 193  DIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGV--TPLH 250

Query: 1170 LAAGEKRHLLMCR 1182
            LAA ++ H  M  
Sbjct: 251  LAA-QEGHAEMVA 262

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  102 bits (256), Expect = 8e-23
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 16/123 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++ GA+ NV+++   TPLH AA  G  ++ + LLQ+ A  + K +D  TPL    R G  
Sbjct: 34   LQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHT 93

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            ++  LL             G++ L  AA++G++  V  LL  + +  C   +G   TPLH
Sbjct: 94   NMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGF--TPLH 151

Query: 1170 LAA 1172
            +AA
Sbjct: 152  VAA 154

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  101 bits (255), Expect = 9e-23
 Identities = 40/123 (32%), Positives = 53/123 (43%), Gaps = 16/123 (13%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDV 1124
             G +         TPLH A+  G   IV+ LLQ GA P+  N    TPL +  R G  +V
Sbjct: 3    PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEV 62

Query: 1125 SDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLA 1171
            +  L               + L  AA+ G+   V+ LL  + N N     G   TPLH+A
Sbjct: 63   AKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGH--TPLHIA 120

Query: 1172 AGE 1174
            A E
Sbjct: 121  ARE 123

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  101 bits (253), Expect = 2e-22
 Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 18/135 (13%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +   D+V+ LL  G S H+    G  PLH A      +V R LL+   + N       TP
Sbjct: 189 HNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTP 248

Query: 61  LHEAAAKGKTDVCIGIYFAEH--SSKSNQYVYGIGGGTGCPMH-------KDRSCYL-AH 110
           LH AA +G  ++           S ++N  +    G T  P+H          +  L  H
Sbjct: 249 LHLAAQEGHAEM------VALLLSKQANGNLGNKSGLT--PLHLVAQEGHVPVADVLIKH 300

Query: 111 GADPFLKNQEGQTPL 125
           G       + G TPL
Sbjct: 301 GVMVDATTRMGYTPL 315

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 96.8 bits (242), Expect = 5e-21
 Identities = 39/139 (28%), Positives = 51/139 (36%), Gaps = 14/139 (10%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  + V  LL   AS       G  PLH A  +G   V  LLLE DA+PN       TP
Sbjct: 123 EGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP 182

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH-------KDRSCYL-AHGA 112
           LH A      D+             +       G T  P+H        + +  L  +G 
Sbjct: 183 LHVAVHHNNLDIV--KLLLPRGGSPH--SPAWNGYT--PLHIAAKQNQVEVARSLLQYGG 236

Query: 113 DPFLKNQEGQTPLDLTVAE 131
               ++ +G TPL L   E
Sbjct: 237 SANAESVQGVTPLHLAAQE 255

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 96.8 bits (242), Expect = 5e-21
 Identities = 42/135 (31%), Positives = 54/135 (40%), Gaps = 18/135 (13%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  ++V+ LL + A+ +     G  PLH A   GH + V  LLE +A+        FTP
Sbjct: 90  IGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTP 149

Query: 61  LHEAAAKGKTDVCIGIYFAEH--SSKSNQYVYGIGGGTGCPMH-------KDRSCYL-AH 110
           LH AA  GK  V      AE      ++    G  G T  P+H        D    L   
Sbjct: 150 LHVAAKYGKVRV------AELLLERDAHPNAAGKNGLT--PLHVAVHHNNLDIVKLLLPR 201

Query: 111 GADPFLKNQEGQTPL 125
           G  P      G TPL
Sbjct: 202 GGSPHSPAWNGYTPL 216

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 96.4 bits (241), Expect = 5e-21
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 31/125 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G   +V+ LL  GAS +  +     PLH A   GH +V + LL+  A  N +   + TP
Sbjct: 24  MGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTP 83

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH AA  G T++              + +                  L + A+P L    
Sbjct: 84  LHCAARIGHTNMV-------------KLL------------------LENNANPNLATTA 112

Query: 121 GQTPL 125
           G TPL
Sbjct: 113 GHTPL 117

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 96.0 bits (240), Expect = 7e-21
 Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 16/123 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +   AN N+ +    TPLH  A +G   +  +L++HG       R G TPL +    G+ 
Sbjct: 265  LSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNI 324

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
             +   L             G S L  AA++G+   V  LL    + N   + G   TPL 
Sbjct: 325  KLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGT--TPLA 382

Query: 1170 LAA 1172
            +A 
Sbjct: 383  IAK 385

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 95.3 bits (238), Expect = 2e-20
 Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 31/125 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  +V +YLL + A ++A+      PLH A   GH ++V+LLLE +ANPN       TP
Sbjct: 57  AGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTP 116

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH AA +G  +                                    L   A      ++
Sbjct: 117 LHIAAREGHVETV-------------------------------LALLEKEASQACMTKK 145

Query: 121 GQTPL 125
           G TPL
Sbjct: 146 GFTPL 150

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 94.9 bits (237), Expect = 2e-20
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 28/126 (22%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           YG   +V++LL   A ++A+   G  PLH A   GH D+V LLL+  A+PN   +   TP
Sbjct: 321 YGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTP 380

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           L  A   G   V                +  +                   +   + ++ 
Sbjct: 381 LAIAKRLGYISVT-------------DVLKVV---------------TDETSFVLVSDKH 412

Query: 121 GQTPLD 126
             +  +
Sbjct: 413 RMSFPE 418

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 85.2 bits (212), Expect = 3e-17
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++H A+VN      ++PLH+AA +G  DIV LLL++GA P++ + DG TPL +  R G  
Sbjct: 331  LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYI 390

Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLA 1171
             V+D+L+  +       + +            +   D      +     
Sbjct: 391  SVTDVLKVVTD------ETS-----------FVLVSDKHRM--SFPETV 420

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 81.8 bits (203), Expect = 3e-16
 Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 31/112 (27%)

Query: 14  GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVC 73
           G S     + GL PLH A   GH  +V+ LL+  A+PN  +    TPLH AA  G T+V 
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVA 63

Query: 74  IGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                                             L + A    K ++ QTPL
Sbjct: 64  -------------------------------KYLLQNKAKVNAKAKDDQTPL 84

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 61.4 bits (150), Expect = 9e-10
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLL---LQHGADPSKKNRDGATPLDLVRE 1119
            +K+GA+ N       TPL  A   G   +  +L       +     ++   +  + V E
Sbjct: 364  LKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETVDE 422

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 45.9 bits (110), Expect = 6e-05
 Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 12/63 (19%)

Query: 214 GLVPLHNACSYGHFEVTEML---IKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEG 270
           G  PL  A   G+  VT++L       + V   D  + +                +L   
Sbjct: 377 GTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPE---------TVDEILDVS 427

Query: 271 ADP 273
            D 
Sbjct: 428 EDE 430

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  198 bits (507), Expect = 4e-57
 Identities = 67/384 (17%), Positives = 117/384 (30%), Gaps = 104/384 (27%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
           +   D   +                +E  +        K +            A   G T
Sbjct: 1   MKMADAKQK--RNEQLKRWIGSETDLEPPVVKRKKTKVKFD-----DGAVFLAACSSGDT 53

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGL 545
           +    L L                +G D            +N  +             GL
Sbjct: 54  EEVLRL-LE---------------RGAD------------INYAN-----------VDGL 74

Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINL 598
             LH AC   + ++ + LV++GAN+N  D   + PLH AA       A+ L+  GA +  
Sbjct: 75  TALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGA 134

Query: 599 KNTDGKTALDLAVPCTRAVLSGDHKK--EELLEAARMMGGGLHRYTWPLGTTDIGWCSCC 656
            N++G T LD+A            ++  +  +    +      +    +   D       
Sbjct: 135 VNSEGDTPLDIAE-------EEAMEELLQNEVNRQGVDIEAARKEEERIMLRDA------ 181

Query: 657 CKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNF-KHPYTGDTPLHCAVTS 715
                                           +++L S  +N  +H  +G T LH A   
Sbjct: 182 --------------------------------RQWLNSGHINDVRHAKSGGTALHVAAAK 209

Query: 716 PYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQ 775
            Y     +++ LI+    +N K+ +   P+H AA  G  +    L+     +  V+ +GQ
Sbjct: 210 GY---TEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQ 266

Query: 776 TALHRTARDDKTQAVRVLLSHNAD 799
           TA      D       +    N  
Sbjct: 267 TAFDVADEDILGYLEELQKKQNLL 290

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  161 bits (409), Expect = 5e-44
 Identities = 68/371 (18%), Positives = 111/371 (29%), Gaps = 117/371 (31%)

Query: 249 TPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEA 308
                             + +                                G   L A
Sbjct: 10  RNEQLKRWIGSETDLEPPVVKRKKT---KVKFDD-------------------GAVFLAA 47

Query: 309 CRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREH 367
           C  GD   V + L     +N+                     + +               
Sbjct: 48  CSSGDTEEVLRLLERGADINYA--------------------NVD--------------- 72

Query: 368 RDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVN 427
                  G TAL  A  +          +V     L+    G +              +N
Sbjct: 73  -------GLTALHQACIDDNV------DMVKF---LV--ENGAN--------------IN 100

Query: 428 CRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQL 487
             D +G    PLH AA    + + EYL++ GA V     A +  G TPL  A ++   +L
Sbjct: 101 QPDNEGW--IPLHAAASCGYLDIAEYLISQGAHV----GAVNSEGDTPLDIAEEEAMEEL 154

Query: 488 SALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQ-TVNARDTAGRKSTPLHFAAGLV 546
                ++     D      E  +       + L +          +G   T LH AA   
Sbjct: 155 LQNE-VN-RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG--TALHVAA--- 207

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLK 599
                 + G+ EV ++L++   +VN+ D   +TPLH AA        + L+++  D+   
Sbjct: 208 ------AKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV 261

Query: 600 NTDGKTALDLA 610
           N  G+TA D+A
Sbjct: 262 NKVGQTAFDVA 272

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  156 bits (397), Expect = 2e-42
 Identities = 58/234 (24%), Positives = 81/234 (34%), Gaps = 62/234 (26%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
            L A   GD   V RLL     I N  ++DG   T LH A   + V +V++L+ +GA++ 
Sbjct: 44  FLAACSSGDTEEVLRLLERGADI-NYANVDGL--TALHQACIDDNVDMVKFLVENGANI- 99

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              N  D  G+ PLH AA  G   ++  L +S               +G           
Sbjct: 100 ---NQPDNEGWIPLHAAASCGYLDIAEYL-IS---------------QGAH--------- 131

Query: 523 PQTVNARDTAGRKSTPLHFAA------------------GLVPLHNACSYGHYEVTEMLV 564
              V A ++ G   TPL  A                                 +  + L 
Sbjct: 132 ---VGAVNSEGD--TPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLN 186

Query: 565 KHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
               N         T LH AA        K L+Q   D+N+K+ DG T L  A 
Sbjct: 187 SGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAA 240

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  144 bits (366), Expect = 3e-38
 Identities = 63/286 (22%), Positives = 98/286 (34%), Gaps = 82/286 (28%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           GL  LH AC   + ++ + L++ GAN+N  D   + PLH AAS   L++   L+S+GA  
Sbjct: 73  GLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV 132

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT 333
              N    + +D+A           E +     E         + +   +     +    
Sbjct: 133 GAVNSEGDTPLDIA-----------EEEAM--EE---------LLQNEVN-----RQGVD 165

Query: 334 GDTPL---PGTLLID----LLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVA-GEN 385
            +         +L D    L S                  H  +    G TAL VA  + 
Sbjct: 166 IEAARKEEERIMLRDARQWLNSGH-----------INDVRHAKS----GGTALHVAAAKG 210

Query: 386 SKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGY 445
             +       V+ L   L+      D              VN +D DG   TPLH AA +
Sbjct: 211 YTE-------VLKL---LI--QARYD--------------VNIKDYDGW--TPLHAAAHW 242

Query: 446 NRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
            +      L+ +  D+     A +K G T    A +     L  L 
Sbjct: 243 GKEEACRILVENLCDM----EAVNKVGQTAFDVADEDILGYLEELQ 284

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  109 bits (274), Expect = 4e-26
 Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 12/118 (10%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            V++GAN+N  D   + PLH AA+ G  DI   L+  GA     N +G TPLD+   E  +
Sbjct: 93   VENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAME 152

Query: 1123 DVSDLL------RGNSALLDAAKKGNLGRVQKLLTAD--NINCRDAQGRNSTPLHLAA 1172
            ++             +A  +  +       ++ L +   N       G   T LH+AA
Sbjct: 153  ELLQNEVNRQGVDIEAARKEEERIMLRD-ARQWLNSGHINDVRHAKSGG--TALHVAA 207

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  108 bits (273), Expect = 5e-26
 Identities = 42/128 (32%), Positives = 54/128 (42%), Gaps = 33/128 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  + V  LL  GA I+  +  GL  LH AC   + D+V+ L+E  AN N  DN  + P
Sbjct: 50  SGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIP 109

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQ 119
           LH AA+ G  D+      AE                          YL + GA     N 
Sbjct: 110 LHAAASCGYLDI------AE--------------------------YLISQGAHVGAVNS 137

Query: 120 EGQTPLDL 127
           EG TPLD+
Sbjct: 138 EGDTPLDI 145

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 98.0 bits (245), Expect = 3e-22
 Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 32/137 (23%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
              +D  ++L +   +       G   LH A + G+ +V++LL++A  + N +D   +TP
Sbjct: 176 IMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTP 235

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH AA  GK + C                                  + +  D    N+ 
Sbjct: 236 LHAAAHWGKEEAC-------------------------------RILVENLCDMEAVNKV 264

Query: 121 GQTPLDLTVAEDVRSLL 137
           GQT  D+   ED+   L
Sbjct: 265 GQTAFDVA-DEDILGYL 280

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 94.9 bits (237), Expect = 3e-21
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 22/134 (16%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
               D+V++L+ +GA+I+  D+ G  PLH A S G+ D+   L+   A+    ++   TP
Sbjct: 83  DDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTP 142

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTG--------CPMHKDRSCYL-AHG 111
           L  A  +   ++              Q      G             M +D   +L +  
Sbjct: 143 LDIAEEEAMEELL-------------QNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH 189

Query: 112 ADPFLKNQEGQTPL 125
            +     + G T L
Sbjct: 190 INDVRHAKSGGTAL 203

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 86.8 bits (216), Expect = 1e-18
 Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 17/125 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            V       V           A + G  + V  LL+ GAD +  N DG T L     + + 
Sbjct: 28   VVKRKKTKVKF-DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNV 86

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            D+   L             G   L  AA  G L   + L++   ++   +++G   TPL 
Sbjct: 87   DMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGD--TPLD 144

Query: 1170 LAAGE 1174
            +A  E
Sbjct: 145  IAEEE 149

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 86.8 bits (216), Expect = 2e-18
 Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 13/124 (10%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++ GA++N A++   T LH+A      D+V+ L+++GA+ ++ + +G  PL      G  
Sbjct: 60   LERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL 119

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHL 1170
            D+++ L             G++ L  A ++     +Q  +    ++   A+      +  
Sbjct: 120  DIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR 179

Query: 1171 AAGE 1174
             A +
Sbjct: 180  DARQ 183

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 84.5 bits (210), Expect = 1e-17
 Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 23/117 (19%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
                 N         T LH AAAKG  ++++LL+Q   D + K+ DG TPL         
Sbjct: 186  NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHA------- 238

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLL 1179
                         AA  G     + L+    ++   +  G+  T   +A  +    L
Sbjct: 239  -------------AAHWGKEEACRILVENLCDMEAVNKVGQ--TAFDVADEDILGYL 280

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 79.1 bits (196), Expect = 6e-16
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++   +VN+ D   +TPLH AA  GK +  R+L+++  D    N+ G T  D+   +   
Sbjct: 219  IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILG 278

Query: 1123 DVSDLLRGNSALLDAAKKG 1141
             + +L +  + L    ++ 
Sbjct: 279  YLEELQKKQNLLHSEKREK 297

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 72.1 bits (178), Expect = 1e-13
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 216 VPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
                ACS G  E    L++ GA++N  ++   T LH+A     +++   L+  GA+
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 66.4 bits (163), Expect = 9e-12
 Identities = 11/56 (19%), Positives = 21/56 (37%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           PLH A  +G  E   +L++   ++ A++    T    A       +  L   +   
Sbjct: 235 PLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNLL 290

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 59.8 bits (146), Expect = 1e-09
 Identities = 10/57 (17%), Positives = 11/57 (19%), Gaps = 1/57 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
                   G     E  +                   A S    E    LL  GAD 
Sbjct: 11  NEQLKRWIGSETDLEPPVVKRKKTKVKF-DDGAVFLAACSSGDTEEVLRLLERGADI 66

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 55.2 bits (134), Expect = 5e-08
 Identities = 13/109 (11%), Positives = 22/109 (20%), Gaps = 32/109 (29%)

Query: 17  IHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGI 76
           +   D             G    +   +        + + +      A + G T+     
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFD-DGAVFLAACSSGDTEE---- 55

Query: 77  YFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                                          L  GAD    N +G T L
Sbjct: 56  --VL-------------------------RLLERGADINYANVDGLTAL 77

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 54.0 bits (131), Expect = 1e-07
 Identities = 6/55 (10%), Positives = 19/55 (34%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDN 55
           +G+++    L+ +   + A +  G      A       +  L  + +   + +  
Sbjct: 242 WGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKRE 296

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  174 bits (444), Expect = 6e-48
 Identities = 62/422 (14%), Positives = 111/422 (26%), Gaps = 122/422 (28%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           +  A++ G    V RL+ +       ++  G   T LH A  +  V   +YL + G    
Sbjct: 24  IHVAARKGQTDEVRRLIETGVSP-TIQNRFGC--TALHLACKFGCVDTAKYLASVGEVHS 80

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
                    G  P+H A    +T L   L +   A                         
Sbjct: 81  LWH------GQKPIHLAVMANKTDLVVAL-VE-GAKER---------------------- 110

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
                                G +P          EV E         +V      T LH
Sbjct: 111 ---------------------GQMPESLLNECDEREVNE------IGSHVKHCKGQTALH 143

Query: 583 EAA---------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK--EELLEAA 631
                        K L+Q GA    K+   +T L  A+          +++  + +++  
Sbjct: 144 WCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAM-------EFRNREALDLMMDTV 196

Query: 632 RMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKF 691
                             +                  ++     L  A          +F
Sbjct: 197 PSKSS-----------LRLD---------------YANKQGNSHLHWAILINWEDVAMRF 230

Query: 692 LTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN------------ 738
           +   + VN +       PL+ +V +       + + L++K      +             
Sbjct: 231 VEMGIDVNMEDNE-HTVPLYLSVRA---AMVLLTKELLQKTDVFLIQACPYHNGTTVLPD 286

Query: 739 -KELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN 797
               L  +  AAD    +VL  L     +V      G     +  +       R+ L+ +
Sbjct: 287 RVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPS 346

Query: 798 AD 799
           A 
Sbjct: 347 AP 348

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  159 bits (405), Expect = 8e-43
 Identities = 30/219 (13%), Positives = 62/219 (28%), Gaps = 43/219 (19%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHI----VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHG 458
           L+ A +  +   +  ++ + P      ++  +  G   + LH+A   N   V    +  G
Sbjct: 177 LMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN--SHLHWAILINWEDVAMRFVEMG 234

Query: 459 ADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVK 518
            DV    N  D     PL+ + +     L+  L L  +                   +  
Sbjct: 235 IDV----NMEDNEHTVPLYLSVRAAMVLLTKEL-LQKTDVFL--------------IQAC 275

Query: 519 KLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKF 578
              N  TV            +  AA              EV ++L +    V  +     
Sbjct: 276 PYHNGTTVLPDRVVWL--DFVPAAA---------DPSKQEVLQLLQEKLDEVVRSLNTGA 324

Query: 579 TPLHEAA-------AKALLQHGADINLKNTDGKTALDLA 610
               +          +  L   A +  ++     +  ++
Sbjct: 325 GGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  152 bits (387), Expect = 2e-40
 Identities = 49/397 (12%), Positives = 92/397 (23%), Gaps = 112/397 (28%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G   LH AC +G  +  + L   G   +        P+H A   ++ ++   L+    + 
Sbjct: 53  GCTALHLACKFGCVDTAKYLASVGEVHSLWHGQ--KPIHLAVMANKTDLVVALVEGAKER 110

Query: 274 ---TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSR-VKKFLTS---DVV 326
                   +     +V    E+   + +      L      G     + K L        
Sbjct: 111 GQMPESLLNECDEREVN---EIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-P 166

Query: 327 NFKHPYTGDTPL-----PG-----TLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGY 376
             K     +TPL             L++D +                + ++ +     G 
Sbjct: 167 TAKDKA-DETPLMRAMEFRNREALDLMMDTVPSKS---------SLRL-DYANK---QGN 212

Query: 377 TALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHS 436
           + L  A   + +       V       +    G D              VN  D +    
Sbjct: 213 SHLHWAILINWE------DVAMR---FV--EMGID--------------VNMEDNEHT-- 245

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKD---------NATDKWGFTPLHEAAQKGRTQL 487
            PL+ +     V + + LL        +                    +  AA   + ++
Sbjct: 246 VPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEV 305

Query: 488 SALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVP 547
             LL                  K  +            V      G              
Sbjct: 306 LQLL-QE---------------KLDE------------VVRSLNTGA--GGAVKRK---- 331

Query: 548 LHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA 584
                      V  M +   A V      +      +
Sbjct: 332 -----KKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  152 bits (387), Expect = 2e-40
 Identities = 49/302 (16%), Positives = 88/302 (29%), Gaps = 82/302 (27%)

Query: 512 GDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVN 571
           G +T   K +N       D        +H AA           G  +    L++ G +  
Sbjct: 3   GSMTDFPK-LN---RIKSDDENM--EKIHVAA---------RKGQTDEVRRLIETGVSPT 47

Query: 572 VADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK 624
           + + +  T LH A        AK L   G   +L    G+  + LAV         +   
Sbjct: 48  IQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW--HGQKPIHLAV-------MANKTD 98

Query: 625 --EELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQ 682
               L+E A                 + G                               
Sbjct: 99  LVVALVEGA----------------KERGQMP---------------------ESLLNEC 121

Query: 683 GDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELL 742
            +    +        + KH   G T LH  V    P+   +++ L++ GA    K+K   
Sbjct: 122 DEREVNEI-----GSHVKH-CKGQTALHWCVGL-GPEYLEMIKILVQLGASPTAKDKADE 174

Query: 743 APIHLAADLGHLDVLDTLLRL-----GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN 797
            P+  A +  + + LD ++         +++  +  G + LH     +        +   
Sbjct: 175 TPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG 234

Query: 798 AD 799
            D
Sbjct: 235 ID 236

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  150 bits (381), Expect = 1e-39
 Identities = 64/397 (16%), Positives = 109/397 (27%), Gaps = 138/397 (34%)

Query: 232 MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE 291
           M      N    D      +H AA K + +    L+  G  PT+ N    +A        
Sbjct: 5   MTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTA-------- 56

Query: 292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTS--DVVNFKHPYTGDTPLPGTLLIDLLSD 349
                        L  AC+ G      K+L S  +V +  H   G  P+           
Sbjct: 57  -------------LHLACKFGC-VDTAKYLASVGEVHSLWH---GQKPI----------- 88

Query: 350 DKEFITVAEEMQATVREHRD-------NGQSGGYTALQVAGENSKKLLQEPPSVVDLESQ 402
                       A +    D         +  G     +  E  ++ + E          
Sbjct: 89  ----------HLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNE---------- 128

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAA--GYNRVAVVEYLLAHGAD 460
                                   + +   G+  T LH+    G   + +++ L+  GA 
Sbjct: 129 ---------------------IGSHVKHCKGQ--TALHWCVGLGPEYLEMIKILVQLGAS 165

Query: 461 VHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKL 520
                 A DK   TPL  A +    +   L+ +    +                      
Sbjct: 166 P----TAKDKADETPLMRAMEFRNREALDLM-MDTVPSK----------SSLR------- 203

Query: 521 VNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTP 580
                ++  +  G   + LH+A               +V    V+ G +VN+ D     P
Sbjct: 204 -----LDYANKQGN--SHLHWAI---------LINWEDVAMRFVEMGIDVNMEDNEHTVP 247

Query: 581 LHEAA-------AKALLQHGADINLKNT---DGKTAL 607
           L+ +         K LLQ      ++     +G T L
Sbjct: 248 LYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVL 284

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  132 bits (335), Expect = 1e-33
 Identities = 47/363 (12%), Positives = 88/363 (24%), Gaps = 104/363 (28%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           +  A       +V  L+             G+   P       +   V E          
Sbjct: 88  IHLAVMANKTDLVVALVEGA-------KERGQ--MPESLLNECDEREVNEIGS------- 131

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSA--LLPLSPSAANDPLRELFEACKGGDLTKVKKL 520
              +     G T LH     G   L    +L +                 G         
Sbjct: 132 ---HVKHCKGQTALHWCVGLGPEYLEMIKIL-VQ---------------LGAS------- 165

Query: 521 VNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLV-----KHGANVNVADL 575
                  A+D A    TPL  A           + + E  ++++     K    ++ A+ 
Sbjct: 166 -----PTAKDKADE--TPLMRAM---------EFRNREALDLMMDTVPSKSSLRLDYANK 209

Query: 576 WKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK--EE 626
              + LH A        A   ++ G D+N+++ +    L L+V               +E
Sbjct: 210 QGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSV-------RAAMVLLTKE 262

Query: 627 LLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPS 686
           LL+   +       Y    GTT                           +  A       
Sbjct: 263 LLQKTDVFLIQACPYHN--GTT----------------VLPDRVVWLDFVPAAADPSKQE 304

Query: 687 RVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPI 745
            ++        V       G                A+    +   A +  +++      
Sbjct: 305 VLQLLQEKLDEVVRSLNT-GAGGAVKRKKK---AAPAVKRMKLAPSAPVRTRSRSRARSS 360

Query: 746 HLA 748
            ++
Sbjct: 361 AVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  118 bits (297), Expect = 1e-28
 Identities = 29/187 (15%), Positives = 49/187 (26%), Gaps = 54/187 (28%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
               D +      +H AA   +   V  L+  G          +++G T LH A + G  
Sbjct: 13  RIKSDDENM--EKIHVAARKGQTDEVRRLIETGVSP----TIQNRFGCTALHLACKFGCV 66

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGL 545
             +  L  S                G               +                G 
Sbjct: 67  DTAKYL-AS---------------VGEV------------HSLWH-------------GQ 85

Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQ-HGADINLKNTDGK 604
            P+H A      ++   LV+              P          + +    ++K+  G+
Sbjct: 86  KPIHLAVMANKTDLVVALVEGAKERG------QMPESLLNECDEREVNEIGSHVKHCKGQ 139

Query: 605 TALDLAV 611
           TAL   V
Sbjct: 140 TALHWCV 146

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 94.6 bits (236), Expect = 9e-21
 Identities = 22/152 (14%), Positives = 42/152 (27%), Gaps = 30/152 (19%)

Query: 1059 LTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-V 1117
            +     K    ++ A+    + LH A      D+    ++ G D + ++ +   PL L V
Sbjct: 193  MDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSV 252

Query: 1118 REGDQDVSDLL-------------------------RGNSALLDAAKKGNLGRVQKLLTA 1152
            R     ++  L                              +  AA       +Q L   
Sbjct: 253  RAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEK 312

Query: 1153 -DNINCRDAQGRNSTPLHLAAGEKRHLLMCRV 1183
             D +      G           +K    + R+
Sbjct: 313  LDEVVRSLNTGA--GGAVKRK-KKAAPAVKRM 341

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 92.2 bits (230), Expect = 7e-20
 Identities = 16/147 (10%), Positives = 39/147 (26%), Gaps = 20/147 (13%)

Query: 1   YGRKDVVEYLLAS-----GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDN 55
           +  ++ ++ ++ +        +   +  G   LH A      DV    +E   + N  DN
Sbjct: 183 FRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN 242

Query: 56  WNFTPLHEAAAKGKTDVC---------IGIYFAEHSSKSNQYVYGIGGGTGCPM-----H 101
            +  PL+ +       +            I    + + +      +      P       
Sbjct: 243 EHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSK 302

Query: 102 KDRSCYL-AHGADPFLKNQEGQTPLDL 127
           ++    L     +       G      
Sbjct: 303 QEVLQLLQEKLDEVVRSLNTGAGGAVK 329

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 89.9 bits (224), Expect = 3e-19
 Identities = 35/152 (23%), Positives = 52/152 (34%), Gaps = 31/152 (20%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G+ D V  L+ +G S   ++  G   LH AC FG  D  + L       +        P
Sbjct: 30  KGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQ--KP 87

Query: 61  LHEAAAKGKTDV------------CIGIYFAEHSSKSNQYVYGIG-------GGT----- 96
           +H A    KTD+             +       +    + V  IG       G T     
Sbjct: 88  IHLAVMANKTDLVVALVEGAKERGQMPESLL--NECDEREVNEIGSHVKHCKGQTALHWC 145

Query: 97  --GCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
               P + +    L   GA P  K++  +TPL
Sbjct: 146 VGLGPEYLEMIKILVQLGASPTAKDKADETPL 177

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 89.2 bits (222), Expect = 5e-19
 Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 16/116 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++ G +  + + +  T LH A   G  D  + L   G   S     G  P+ L V     
Sbjct: 40   IETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW--HGQKPIHLAVMANKT 97

Query: 1123 DVSDLL------RGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAA 1172
            D+   L      RG        +       +        + +  +G+  T LH   
Sbjct: 98   DLVVALVEGAKERGQMPESLLNECDEREVNEI-----GSHVKHCKGQ--TALHWCV 146

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 88.0 bits (219), Expect = 1e-18
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 24/137 (17%)

Query: 1067 GANVNVADLWKFTPLHEAAAKGKA--DIVRLLLQHGADPSKKNRDGATPLDL-VREGDQD 1123
                +V      T LH     G    +++++L+Q GA P+ K++   TPL   +   +++
Sbjct: 128  EIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNRE 187

Query: 1124 VSDLL-----------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNS 1165
              DL+                 +GNS L  A          + +    ++N  D +    
Sbjct: 188  ALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHT-- 245

Query: 1166 TPLHLAAGEKRHLLMCR 1182
             PL+L+      +L+ +
Sbjct: 246  VPLYLSV-RAAMVLLTK 261

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 84.9 bits (211), Expect = 2e-17
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 36/129 (27%)

Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEAD-----ANPNTRDNW 56
              ++++ L+  GAS  A+D     PL  A  F + + + L+++          +  +  
Sbjct: 151 EYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ 210

Query: 57  NFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFL 116
             + LH A      DV                                  ++  G D  +
Sbjct: 211 GNSHLHWAILINWEDVA-------------------------------MRFVEMGIDVNM 239

Query: 117 KNQEGQTPL 125
           ++ E   PL
Sbjct: 240 EDNEHTVPL 248

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 81.1 bits (201), Expect = 3e-16
 Identities = 21/139 (15%), Positives = 40/139 (28%), Gaps = 30/139 (21%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLL-----QHGADPSKKNRDGATPLDL-V 1117
            V+ GA+    D    TPL  A      + + L++     +        N+ G + L   +
Sbjct: 160  VQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAI 219

Query: 1118 REGDQDVSDLL------------RGNSALLDAAKKGNLGRVQKLLT-ADNINCRDAQGRN 1164
                +DV+                    L  + +   +   ++LL   D    +     N
Sbjct: 220  LINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHN 279

Query: 1165 -----------STPLHLAA 1172
                          +  AA
Sbjct: 280  GTTVLPDRVVWLDFVPAAA 298

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 79.5 bits (197), Expect = 8e-16
 Identities = 15/140 (10%), Positives = 29/140 (20%), Gaps = 44/140 (31%)

Query: 1   YGRKDVVEYLLA-------------SGASIHARDDGGLHPLHNACSFGHADVVRLLLEAD 47
                + + LL              +G ++       L  +  A      +V++LL E  
Sbjct: 254 AAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKL 313

Query: 48  ANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCY 107
                  N       +   K    V                                   
Sbjct: 314 DEVVRSLNTGAGGAVKRKKKAAPAVK-------------------------------RMK 342

Query: 108 LAHGADPFLKNQEGQTPLDL 127
           LA  A    +++       +
Sbjct: 343 LAPSAPVRTRSRSRARSSAV 362

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 77.6 bits (192), Expect = 4e-15
 Identities = 13/108 (12%), Positives = 27/108 (25%), Gaps = 23/108 (21%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDV 1124
             +G  V    +     +  AA   K ++++LL +   +  +    GA             
Sbjct: 278  HNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVK-------- 329

Query: 1125 SDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLA 1171
                          KK      +  L     +  R           ++
Sbjct: 330  ------------RKKKAAPAVKRMKLAPSAPVRTRSRSRA--RSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 76.8 bits (190), Expect = 7e-15
 Identities = 9/64 (14%), Positives = 18/64 (28%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
             +++V++ L      +    + G              V R+ L   A   TR       
Sbjct: 300 PSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARS 359

Query: 61  LHEA 64
              +
Sbjct: 360 SAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 75.3 bits (186), Expect = 2e-14
 Identities = 13/59 (22%), Positives = 22/59 (37%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            +  +H A   G  +    LI+ G +    + +  T LH A     ++    L S G  
Sbjct: 20  NMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV 78

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 74.1 bits (183), Expect = 5e-14
 Identities = 7/53 (13%), Positives = 15/53 (28%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL 1116
             +    V  +         +   K    + R+ L   A    ++R  A    +
Sbjct: 310  QEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAV 362

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 71.1 bits (175), Expect = 5e-13
 Identities = 24/114 (21%), Positives = 35/114 (30%), Gaps = 35/114 (30%)

Query: 13  SGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDV 72
              +    DD  +  +H A   G  D VR L+E   +P  ++ +  T LH A   G  D 
Sbjct: 9   PKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDT 68

Query: 73  CIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                 A+                          YL + G         GQ P+
Sbjct: 69  ------AK--------------------------YLASVGEVH--SLWHGQKPI 88

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 69.5 bits (171), Expect = 2e-12
 Identities = 7/75 (9%), Positives = 15/75 (20%), Gaps = 3/75 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
               +  A       ++ +++ L  K   +                     V    L   
Sbjct: 290 WLDFVPAAADP---SKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPS 346

Query: 765 AKVNLVDVLGQTALH 779
           A V         +  
Sbjct: 347 APVRTRSRSRARSSA 361

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 45.6 bits (109), Expect = 8e-05
 Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 18/92 (19%)

Query: 1095 LLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL------------RGNSALLDAAKKG 1141
            +      +  K + +    + +  R+G  D    L             G +AL  A K G
Sbjct: 5    MTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFG 64

Query: 1142 NLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
             +   + L +     +          P+HLA 
Sbjct: 65   CVDTAKYLASVGEVHSLWH----GQKPIHLAV 92

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  163 bits (416), Expect = 3e-45
 Identities = 61/377 (16%), Positives = 93/377 (24%), Gaps = 120/377 (31%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGAN---VNAMDLWQFTPLHEAASKSRLEVCSLLLSEG 270
           G   LH A  + H    + L+   A    ++  +    T LH AA          L + G
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 271 ADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKH 330
           A   +      +A                     L  ACR                    
Sbjct: 69  AGVLVAERGGHTA---------------------LHLACRVRA---------HTCA---- 94

Query: 331 PYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLL 390
                      +L+                    +       +    A   +  N +   
Sbjct: 95  ----------CVLLQPRPS----HPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPEN-- 138

Query: 391 QEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAV 450
                    E +  +                    +   + DG   TPLH A  +    +
Sbjct: 139 ---------EEEPRDEDWRLQ--------------LEAENYDGH--TPLHVAVIHKDAEM 173

Query: 451 VEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACK 510
           V  L   GAD++  +      G TPLH A +     +  LL L                 
Sbjct: 174 VRLLRDAGADLNKPEP---TCGRTPLHLAVEAQAASVLELL-LK---------------A 214

Query: 511 GGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANV 570
           G D              AR   GR  TPL  A             +  +  +L  HGA  
Sbjct: 215 GAD------------PTARMYGGR--TPLGSAL---------LRPNPILARLLRAHGAPE 251

Query: 571 NVADLWKFTPLHEAAAK 587
                 K +P   + + 
Sbjct: 252 PEDGGDKLSPCSSSGSD 268

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  156 bits (397), Expect = 1e-42
 Identities = 57/341 (16%), Positives = 90/341 (26%), Gaps = 73/341 (21%)

Query: 466 NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQT 525
               + G T LH A           L L  SA                          + 
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFL-LGFSA------------------------GHEY 37

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
           ++ ++  G+  T LH AA           G     E L   GA V VA+    T LH A 
Sbjct: 38  LDLQNDLGQ--TALHLAA---------ILGEASTVEKLYAAGAGVLVAERGGHTALHLAC 86

Query: 586 -------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGL 638
                  A  LLQ         +D                + D         ++      
Sbjct: 87  RVRAHTCACVLLQPRPSHPRDASDTYLTQSQDC-------TPDTSHAPAAVDSQPNPENE 139

Query: 639 HRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTS---D 695
                      +                 ++      L  A    D   + + L     D
Sbjct: 140 EEPRDEDWRLQLE---------------AENYDGHTPLHVAVIHKDA-EMVRLLRDAGAD 183

Query: 696 VVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLD 755
           + N   P  G TPLH AV +   +  +++E L++ GA    +      P+  A    +  
Sbjct: 184 L-NKPEPTCGRTPLHLAVEA---QAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPI 239

Query: 756 VLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSH 796
           +   L   GA          +    +  D  +        +
Sbjct: 240 LARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEY 280

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  148 bits (377), Expect = 5e-40
 Identities = 57/289 (19%), Positives = 84/289 (29%), Gaps = 55/289 (19%)

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGAN---VNVADLWKFTPLH 582
                  G   T LH A           + H    + L+   A    +++ +    T LH
Sbjct: 2   FGYVTEDGD--TALHLAV---------IHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALH 50

Query: 583 EAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK--EELLEAARM 633
            AA        + L   GA + +    G TAL LA                  LL+    
Sbjct: 51  LAAILGEASTVEKLYAAGAGVLVAERGGHTALHLAC-------RVRAHTCACVLLQP--- 100

Query: 634 MGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLT 693
                 R       T                     +          +    +  +    
Sbjct: 101 -RPSHPRDASDTYLTQS--------------QDCTPDTSHAPAAVDSQPNPENEEEPRDE 145

Query: 694 SD--VVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKEL-LAPIHLAAD 750
                +  ++   G TPLH AV     K   +V  L   GA LN+        P+HLA +
Sbjct: 146 DWRLQLEAENYD-GHTPLHVAV---IHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVE 201

Query: 751 LGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
                VL+ LL+ GA        G+T L            R+L +H A 
Sbjct: 202 AQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  148 bits (376), Expect = 8e-40
 Identities = 61/355 (17%), Positives = 88/355 (24%), Gaps = 119/355 (33%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G   LH A   G     E L  AGA V   +    T LH A          +LL      
Sbjct: 45  GQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSH 104

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT 333
                                                   P        +   +     T
Sbjct: 105 ----------------------------------------PRDASDTYLTQSQD----CT 120

Query: 334 GDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEP 393
            DT      +    + + E     E+ +  + E  +     G+T L VA  +        
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQL-EAENY---DGHTPLHVAVIHKDA----- 171

Query: 394 PSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLD-GRHSTPLHFAAGYNRVAVVE 452
             +V L   L     G D              +N  +   GR  TPLH A      +V+E
Sbjct: 172 -EMVRL---LR--DAGAD--------------LNKPEPTCGR--TPLHLAVEAQAASVLE 209

Query: 453 YLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGG 512
            LL  GAD      A    G TPL  A  +    L+ LL  +                G 
Sbjct: 210 LLLKAGADP----TARMYGGRTPLGSALLRPNPILARLL-RA---------------HGA 249

Query: 513 DLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHG 567
                                   +P   +          S    +  +   ++ 
Sbjct: 250 P------------EPEDGGDKL--SPCSSSG---------SDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  139 bits (354), Expect = 7e-37
 Identities = 47/265 (17%), Positives = 66/265 (24%), Gaps = 73/265 (27%)

Query: 375 GYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGR 434
           G+TAL +A            +   +   LL                      +C      
Sbjct: 78  GHTALHLACRVRAH------TCACV---LL--QPRPSHPRDASDTYL-TQSQDCTPDTSH 125

Query: 435 HSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLS 494
                  +                  +     A +  G TPLH A      ++  LL   
Sbjct: 126 APA-AVDSQPNPENEEEPRDEDWRLQL----EAENYDGHTPLHVAVIHKDAEMVRLL-RD 179

Query: 495 PSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARD-TAGRKSTPLHFAAGLVPLHNACS 553
                           G D            +N  + T GR  TPLH A           
Sbjct: 180 ---------------AGAD------------LNKPEPTCGR--TPLHLAV---------E 201

Query: 554 YGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTA 606
                V E+L+K GA+         TPL  A        A+ L  HGA       D  + 
Sbjct: 202 AQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSP 261

Query: 607 LDLAVPCTRAVLSGDHKK--EELLE 629
              +        S       +E  E
Sbjct: 262 CSSSG-------SDSDSDNRDEGDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  102 bits (257), Expect = 5e-24
 Identities = 27/128 (21%), Positives = 41/128 (32%), Gaps = 32/128 (25%)

Query: 1   YGRKDVVEYLLASGASIHARD-DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
           +   ++V  L  +GA ++  +   G  PLH A     A V+ LLL+A A+P  R     T
Sbjct: 168 HKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRT 227

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
           PL  A  +    +                                    AHGA       
Sbjct: 228 PLGSALLRPNPILA-------------------------------RLLRAHGAPEPEDGG 256

Query: 120 EGQTPLDL 127
           +  +P   
Sbjct: 257 DKLSPCSS 264

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  100 bits (252), Expect = 2e-23
 Identities = 24/144 (16%), Positives = 40/144 (27%), Gaps = 19/144 (13%)

Query: 1   YGRKDVVEYLLASGA---SIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWN 57
           +  +  +++LL   A    +  ++D G   LH A   G A  V  L  A A     +   
Sbjct: 19  HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGG 78

Query: 58  FTPLHEAAAKGKTDVC---------IGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCY- 107
            T LH A                       ++     +Q            +    +   
Sbjct: 79  HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPEN 138

Query: 108 ------LAHGADPFLKNQEGQTPL 125
                          +N +G TPL
Sbjct: 139 EEEPRDEDWRLQLEAENYDGHTPL 162

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 97.2 bits (243), Expect = 3e-22
 Identities = 20/111 (18%), Positives = 31/111 (27%), Gaps = 11/111 (9%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
               GA V VA+    T LH A          +LLQ      +   D           D  
Sbjct: 65   YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD-- 122

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLL--TADNINCRDAQGRNSTPLHLAA 1172
                   ++     ++       +         +   +  G   TPLH+A 
Sbjct: 123  -----TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH--TPLHVAV 166

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 92.2 bits (230), Expect = 1e-20
 Identities = 19/72 (26%), Positives = 28/72 (38%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
                V+E LL +GA   AR  GG  PL +A    +  + RLL    A          +P
Sbjct: 202 AQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSP 261

Query: 61  LHEAAAKGKTDV 72
              + +   +D 
Sbjct: 262 CSSSGSDSDSDN 273

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 91.1 bits (227), Expect = 4e-20
 Identities = 29/124 (23%), Positives = 40/124 (32%), Gaps = 17/124 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRD-GATPLDL-VREGD 1121
                  +   +    TPLH A     A++VRLL   GAD +K     G TPL L V    
Sbjct: 145  EDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQA 204

Query: 1122 QDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPL 1168
              V +LL             G + L  A  + N    + L                 +P 
Sbjct: 205  ASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKL--SPC 262

Query: 1169 HLAA 1172
              + 
Sbjct: 263  SSSG 266

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 84.1 bits (209), Expect = 9e-18
 Identities = 30/125 (24%), Positives = 40/125 (32%), Gaps = 32/125 (25%)

Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD-NWNFTP 60
              +           + A +  G  PLH A     A++VRLL +A A+ N  +     TP
Sbjct: 136 PENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP 195

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH A       V       E                           L  GADP  +   
Sbjct: 196 LHLAVEAQAASV------LE-------------------------LLLKAGADPTARMYG 224

Query: 121 GQTPL 125
           G+TPL
Sbjct: 225 GRTPL 229

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 82.2 bits (204), Expect = 4e-17
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K GA+         TPL  A  +    + RLL  HGA   +   D  +P      + D 
Sbjct: 212  LKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271

Query: 1123 DVSDLL 1128
            D  D  
Sbjct: 272  DNRDEG 277

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 69.9 bits (172), Expect = 6e-13
 Identities = 26/104 (25%), Positives = 31/104 (29%), Gaps = 27/104 (25%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPS---KKNRDGATPLDLVREGDQDVSDLLRGNSALL 1135
            T LH A        +  LL   A       +N  G T L L                   
Sbjct: 11   TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHL------------------- 51

Query: 1136 DAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHL 1178
             AA  G    V+KL  A   +   +  G   T LHLA    R  
Sbjct: 52   -AAILGEASTVEKLYAAGAGVLVAERGGH--TALHLAC-RVRAH 91

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 64.5 bits (158), Expect = 3e-11
 Identities = 22/111 (19%), Positives = 31/111 (27%), Gaps = 36/111 (32%)

Query: 19  ARDDGGLHPLHNACSFGHADVVRLLLEADANP---NTRDNWNFTPLHEAAAKGKTDVCIG 75
              + G   LH A    H   +  LL   A     + +++   T LH AA  G+      
Sbjct: 4   YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEAST--- 60

Query: 76  IYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
               E                           L A GA   +  + G T L
Sbjct: 61  ---VE--------------------------KLYAAGAGVLVAERGGHTAL 82

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 56.4 bits (137), Expect = 2e-08
 Identities = 10/47 (21%), Positives = 14/47 (29%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEAD 47
                +   L A GA         L P  ++ S   +D      E D
Sbjct: 235 RPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 42.1 bits (100), Expect = 6e-04
 Identities = 6/37 (16%), Positives = 12/37 (32%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHG 1100
              HGA        K +P   + +   +D      ++ 
Sbjct: 245  RAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  161 bits (411), Expect = 2e-44
 Identities = 71/347 (20%), Positives = 108/347 (31%), Gaps = 92/347 (26%)

Query: 472 GFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT 531
               L +A Q     L   L L                 G +            VN ++ 
Sbjct: 5   DNHLLIKAVQNEDVDLVQQL-LE---------------GGAN------------VNFQEE 36

Query: 532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA------ 585
            G   TPLH A               ++ E+L++HGA+  +      TP   AA      
Sbjct: 37  EGGW-TPLHNAV---------QMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVK 86

Query: 586 -AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK--EELLEA-----ARMMGGG 637
             K  L  GAD+N  +  G TA   A             K  + L +       R     
Sbjct: 87  LLKLFLSKGADVNECDFYGFTAFMEAA-------VYGKVKALKFLYKRGANVNLRRKTKE 139

Query: 638 LHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV- 696
                   G T                           L++A  +G    +K  L  ++ 
Sbjct: 140 DQERLRKGGAT----------------A----------LMDAAEKGHVEVLK-ILLDEMG 172

Query: 697 --VNFKHPYTGDTPLHCAVT-SPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGH 753
             VN      G   L  A+  S     +AI   L+  GA +N + +    P+ LA +  H
Sbjct: 173 ADVNACDNM-GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKH 231

Query: 754 LDVLDTLL-RLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           L ++  LL +   ++N  D  G+TAL         +   +L    A 
Sbjct: 232 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  154 bits (393), Expect = 4e-42
 Identities = 83/374 (22%), Positives = 122/374 (32%), Gaps = 112/374 (29%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDL-WQFTPLHEAASKSRLEVCSLLLSEGADPTL 275
            L  A      ++ + L++ GANVN  +    +TPLH A   SR ++  LLL  GADP L
Sbjct: 8   LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67

Query: 276 HNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTG 334
              +  +                       L A   G    +K FL+    VN    Y G
Sbjct: 68  RKKNGATP---------------------FLLAAIAGSVKLLKLFLSKGADVNECDFY-G 105

Query: 335 DTPLPGTLLIDLLSDDKEFITVAE---------EMQATVREHRDNGQSGGYTALQVAGEN 385
            T         + +     +   +          ++   +E ++  + GG TAL  A   
Sbjct: 106 FTAF-------MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA--- 155

Query: 386 SKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGY 445
                                ++ G + V+  LL      VN  D  GR    L  A   
Sbjct: 156 ---------------------AEKGHVEVLKILLDEMGADVNACDNMGR--NALIHALLS 192

Query: 446 NRV----AVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDP 501
           +      A+   LL HGADV    N   + G TPL  A +K    L   L L        
Sbjct: 193 SDDSDVEAITHLLLDHGADV----NVRGERGKTPLILAVEKKHLGLVQRL-LEQEHIE-- 245

Query: 502 LRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
                                   +N  D+ G+  T L  A               ++ E
Sbjct: 246 ------------------------INDTDSDGK--TALLLAV---------ELKLKKIAE 270

Query: 562 MLVKHGANVNVADL 575
           +L K GA+ +  DL
Sbjct: 271 LLCKRGASTDCGDL 284

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  151 bits (384), Expect = 8e-41
 Identities = 82/326 (25%), Positives = 118/326 (36%), Gaps = 90/326 (27%)

Query: 304 CLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAE---E 359
            L++A +  D   V++ L     VNF+    G TPL       +    ++   + E    
Sbjct: 8   LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPL----HNAVQMSRED---IVELLLR 60

Query: 360 MQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLL 419
             A     R      G T   +A             ++ L    L  SKG D        
Sbjct: 61  HGADP-VLRKKN---GATPFLLAAIAGSV------KLLKL---FL--SKGAD-------- 97

Query: 420 SSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDN------ATDKWGF 473
                 VN  D  G   T    AA Y +V  +++L   GA+V+ +           K G 
Sbjct: 98  ------VNECDFYGF--TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGA 149

Query: 474 TPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAG 533
           T L +AA+KG  ++  +L L    A+                          VNA D  G
Sbjct: 150 TALMDAAEKGHVEVLKIL-LDEMGAD--------------------------VNACDNMG 182

Query: 534 RKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------A 586
           R    L  A       ++       +T +L+ HGA+VNV      TPL  A         
Sbjct: 183 R--NALIHAL-----LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLV 235

Query: 587 KALL-QHGADINLKNTDGKTALDLAV 611
           + LL Q   +IN  ++DGKTAL LAV
Sbjct: 236 QRLLEQEHIEINDTDSDGKTALLLAV 261

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  143 bits (363), Expect = 5e-38
 Identities = 50/197 (25%), Positives = 71/197 (36%), Gaps = 61/197 (30%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           +      L  A     V +V+ LL  GA+V+ ++    + G+TPLH A Q  R  +  LL
Sbjct: 4   EDN--HLLIKAVQNEDVDLVQQLLEGGANVNFQEE---EGGWTPLHNAVQMSREDIVELL 58

Query: 492 PLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNA 551
            L                 G D               R   G   TP   AA        
Sbjct: 59  -LR---------------HGAD------------PVLRKKNGA--TPFLLAA-------- 80

Query: 552 CSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTD-- 602
              G  ++ ++ +  GA+VN  D + FT   EAA        K L + GA++NL+     
Sbjct: 81  -IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE 139

Query: 603 --------GKTALDLAV 611
                   G TAL  A 
Sbjct: 140 DQERLRKGGATALMDAA 156

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  134 bits (340), Expect = 6e-35
 Identities = 65/280 (23%), Positives = 97/280 (34%), Gaps = 81/280 (28%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  P   A   G  ++ ++ +  GA+VN  D + FT   EAA   +++    L   GA+ 
Sbjct: 72  GATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 131

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHC-LLEACRQGDPSRVKKFLTSDVVNFKHPY 332
              N   K+  D    R+          G   L++A  +G    +K              
Sbjct: 132 ---NLRRKTKEDQERLRK---------GGATALMDAAEKGHVEVLK-------------- 165

Query: 333 TGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQE 392
                    +L+D             EM A V    DN    G  AL  A  +S     E
Sbjct: 166 ---------ILLD-------------EMGADV-NACDN---MGRNALIHALLSSDDSDVE 199

Query: 393 PPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVE 452
             ++  L   LL    G D              VN R   G+  TPL  A     + +V+
Sbjct: 200 --AITHL---LL--DHGAD--------------VNVRGERGK--TPLILAVEKKHLGLVQ 236

Query: 453 YLLAH-GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
            LL     ++    N TD  G T L  A +    +++ LL
Sbjct: 237 RLLEQEHIEI----NDTDSDGKTALLLAVELKLKKIAELL 272

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  100 bits (252), Expect = 3e-23
 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 27/134 (20%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++HGA+  +      TP   AA  G   +++L L  GAD ++ +  G T        G  
Sbjct: 59   LRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 118

Query: 1123 DVSDLL----------------------RGNSALLDAAKKGNLGRVQKLLTAD--NINCR 1158
                 L                       G +AL+DAA+KG++  ++ LL     ++N  
Sbjct: 119  KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC 178

Query: 1159 DAQGRNSTPLHLAA 1172
            D  GR    L  A 
Sbjct: 179  DNMGR--NALIHAL 190

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 97.5 bits (244), Expect = 3e-22
 Identities = 25/72 (34%), Positives = 32/72 (44%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
             R+D+VE LL  GA    R   G  P   A   G   +++L L   A+ N  D + FT 
Sbjct: 49  MSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTA 108

Query: 61  LHEAAAKGKTDV 72
             EAA  GK   
Sbjct: 109 FMEAAVYGKVKA 120

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 93.3 bits (233), Expect = 7e-21
 Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 24/136 (17%)

Query: 1066 HGANVNVADL-WKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQD 1123
             GANVN  +    +TPLH A    + DIV LLL+HGADP  + ++GATP  L    G   
Sbjct: 27   GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVK 86

Query: 1124 VSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNS----- 1165
            +  L              G +A ++AA  G +  ++ L     N+N R     +      
Sbjct: 87   LLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRK 146

Query: 1166 ---TPLHLAAGEKRHL 1178
               T L  AA EK H+
Sbjct: 147  GGATALMDAA-EKGHV 161

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 92.1 bits (230), Expect = 2e-20
 Identities = 31/127 (24%), Positives = 45/127 (35%), Gaps = 34/127 (26%)

Query: 1   YGRKDVVEYLLASGASIHARD-DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
               D+V+ LL  GA+++ ++ +GG  PLHNA      D+V LLL   A+P  R     T
Sbjct: 15  NEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGAT 74

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKN 118
           P   AA  G   +       +                             + GAD    +
Sbjct: 75  PFLLAAIAGSVKL------LK--------------------------LFLSKGADVNECD 102

Query: 119 QEGQTPL 125
             G T  
Sbjct: 103 FYGFTAF 109

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 85.6 bits (213), Expect = 3e-18
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 33/150 (22%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWN--- 57
            G   +++  L+ GA ++  D  G      A  +G    ++ L +  AN N R       
Sbjct: 82  AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ 141

Query: 58  -------FTPLHEAAAKGKTDVC---IGIYFAEHSSKSNQYVYGIGGGTGCPMH------ 101
                   T L +AA KG  +V    +    A+ ++  N       G     +       
Sbjct: 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM------GRN--ALIHALLSS 193

Query: 102 -----KDRSCYL-AHGADPFLKNQEGQTPL 125
                +  +  L  HGAD  ++ + G+TPL
Sbjct: 194 DDSDVEAITHLLLDHGADVNVRGERGKTPL 223

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 83.3 bits (207), Expect = 2e-17
 Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 33/145 (22%)

Query: 1064 VKHGANVNVADLWK----------FTPLHEAAAKGKADIVRLLLQH-GADPSKKNRDGAT 1112
             K GANVN+    K           T L +AA KG  +++++LL   GAD +  +  G  
Sbjct: 125  YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184

Query: 1113 PLDLV-----REGDQDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-- 1153
             L            + ++ LL            RG + L+ A +K +LG VQ+LL  +  
Sbjct: 185  ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 244

Query: 1154 NINCRDAQGRNSTPLHLAAGEKRHL 1178
             IN  D+ G+  T L LA  E +  
Sbjct: 245  EINDTDSDGK--TALLLAV-ELKLK 266

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 82.9 bits (206), Expect = 3e-17
 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEAD-ANPNTRDNWNFTP 60
             + +   LL  GA ++ R + G  PL  A    H  +V+ LLE +    N  D+   T 
Sbjct: 197 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTA 256

Query: 61  LHEAAAKGKTDV 72
           L  A       +
Sbjct: 257 LLLAVELKLKKI 268

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 71.3 bits (176), Expect = 2e-13
 Identities = 24/98 (24%), Positives = 35/98 (35%), Gaps = 22/98 (22%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLL-QHGADPSKKNRDGATPLDLVREGDQ 1122
            + HGA+VNV      TPL  A  K    +V+ LL Q   + +  + DG T L L      
Sbjct: 206  LDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLL------ 259

Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRD 1159
                          A +       + L     + +C D
Sbjct: 260  --------------AVELKLKKIAELLCKRGASTDCGD 283

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 67.9 bits (167), Expect = 2e-12
 Identities = 28/104 (26%), Positives = 37/104 (35%), Gaps = 34/104 (32%)

Query: 24  GLHPLHNACSFGHADVVRLLLEADANPNTRDN-WNFTPLHEAAAKGKTDVCIGIYFAEHS 82
             H L  A      D+V+ LLE  AN N ++    +TPLH A    + D+       E  
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDI------VE-- 56

Query: 83  SKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                                    L  HGADP L+ + G TP 
Sbjct: 57  ------------------------LLLRHGADPVLRKKNGATPF 76

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 64.0 bits (157), Expect = 5e-11
 Identities = 12/56 (21%), Positives = 19/56 (33%), Gaps = 1/56 (1%)

Query: 1   YGRKDVVEYLLAS-GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDN 55
                +V+ LL      I+  D  G   L  A       +  LL +  A+ +  D 
Sbjct: 229 KKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 60.9 bits (149), Expect = 5e-10
 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLI-RKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
           G TPL  AV     K   +V+ L+ ++   +N+ + +    + LA +L    + + L + 
Sbjct: 219 GKTPLILAV---EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275

Query: 764 GAKVNLVDVL 773
           GA  +  D++
Sbjct: 276 GASTDCGDLV 285

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 42.5 bits (101), Expect = 5e-04
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 1130 GNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
             N  L+ A +  ++  VQ+LL    N+N ++ +G   TPLH A 
Sbjct: 5    DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGW-TPLHNAV 47

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  157 bits (399), Expect = 3e-44
 Identities = 42/210 (20%), Positives = 71/210 (33%), Gaps = 52/210 (24%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           + + +  G++  +   L    ++VN  D  G   TPL +A+ +  +  V +LL  GAD  
Sbjct: 6   IHQLAAQGELDQLKEHLRKGDNLVNKPDERGF--TPLIWASAFGEIETVRFLLEWGADP- 62

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              +   K   + L  A+  G T +  LL L                +  D         
Sbjct: 63  ---HILAKERESALSLASTGGYTDIVGLL-LE---------------RDVD--------- 94

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              +N  D  G   TPL +A             H +  E L+  GA++       +TP+ 
Sbjct: 95  ---INIYDWNGG--TPLLYAV---------RGNHVKCVEALLARGADLTTEADSGYTPMD 140

Query: 583 EAA-------AKALLQHGADINLKNTDGKT 605
            A         + +  H   +   N     
Sbjct: 141 LAVALGYRKVQQVIENHILKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  146 bits (372), Expect = 1e-40
 Identities = 40/183 (21%), Positives = 65/183 (35%), Gaps = 49/183 (26%)

Query: 436 STPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSP 495
           S  +H  A    +  ++  L  G +     N  D+ GFTPL  A+  G  +    L L  
Sbjct: 3   SLSIHQLAAQGELDQLKEHLRKGDN---LVNKPDERGFTPLIWASAFGEIETVRFL-LE- 57

Query: 496 SAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYG 555
                          G D             +         + L  A+         + G
Sbjct: 58  --------------WGAD------------PHILAKERE--SALSLAS---------TGG 80

Query: 556 HYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALD 608
           + ++  +L++   ++N+ D    TPL  A         +ALL  GAD+  +   G T +D
Sbjct: 81  YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMD 140

Query: 609 LAV 611
           LAV
Sbjct: 141 LAV 143

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  117 bits (296), Expect = 2e-30
 Identities = 37/217 (17%), Positives = 71/217 (32%), Gaps = 56/217 (25%)

Query: 374 GGYTALQVAGEN-----SKKLLQEPPSVVDLESQ-----LLEASKGGDMTVVTRLLSSCP 423
           G   ++            K+ L++  ++V+   +     L+ AS  G++  V  LL    
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA 60

Query: 424 HIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG 483
              +    +    + L  A+      +V  LL    D+    N  D  G TPL  A +  
Sbjct: 61  D-PHILAKERE--SALSLASTGGYTDIVGLLLERDVDI----NIYDWNGGTPLLYAVRGN 113

Query: 484 RTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAA 543
             +    L L+               +G D            +     +G   TP+  A 
Sbjct: 114 HVKCVEAL-LA---------------RGAD------------LTTEADSGY--TPMDLAV 143

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTP 580
                    + G+ +V +++  H   +  ++L    P
Sbjct: 144 ---------ALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 99.8 bits (250), Expect = 3e-24
 Identities = 33/127 (25%), Positives = 44/127 (34%), Gaps = 31/127 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +G  + V +LL  GA  H         L  A + G+ D+V LLLE D + N  D    TP
Sbjct: 46  FGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTP 105

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           L  A                      + +                  LA GAD   +   
Sbjct: 106 LLYAVRGNHVKCV-------------EAL------------------LARGADLTTEADS 134

Query: 121 GQTPLDL 127
           G TP+DL
Sbjct: 135 GYTPMDL 141

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 98.3 bits (246), Expect = 1e-23
 Identities = 28/124 (22%), Positives = 35/124 (28%), Gaps = 31/124 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  D+V  LL     I+  D  G  PL  A    H   V  LL   A+  T  +  +TP
Sbjct: 79  GGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTP 138

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           +  A A G   V              Q +                    H    F  N  
Sbjct: 139 MDLAVALGYRKVQ-------------QVI------------------ENHILKLFQSNLV 167

Query: 121 GQTP 124
              P
Sbjct: 168 PADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 92.5 bits (231), Expect = 1e-21
 Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 17/124 (13%)

Query: 1064 VKHGAN-VNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGD 1121
            ++ G N VN  D   FTPL  A+A G+ + VR LL+ GADP    ++  + L L    G 
Sbjct: 22   LRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81

Query: 1122 QDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPL 1168
             D+  LL             G + LL A +  ++  V+ LL    ++      G   TP+
Sbjct: 82   TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGY--TPM 139

Query: 1169 HLAA 1172
             LA 
Sbjct: 140  DLAV 143

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 91.3 bits (228), Expect = 3e-21
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 6/126 (4%)

Query: 676 LLEACRQGDPSRVKKFLTS--DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAH 733
           + +   QG+  ++K+ L    ++VN      G TPL  A           V  L+  GA 
Sbjct: 6   IHQLAAQGELDQLKEHLRKGDNLVNKPDER-GFTPLIWAS---AFGEIETVRFLLEWGAD 61

Query: 734 LNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL 793
            +   KE  + + LA+  G+ D++  LL     +N+ D  G T L    R +  + V  L
Sbjct: 62  PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121

Query: 794 LSHNAD 799
           L+  AD
Sbjct: 122 LARGAD 127

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 83.2 bits (207), Expect = 2e-18
 Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
            ++ L  A T  Y     IV  L+ +   +N  +     P+  A    H+  ++ LL  G
Sbjct: 69  RESALSLASTGGY---TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG 125

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A +      G T +         +  +V+ +H   
Sbjct: 126 ADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK 160

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 81.3 bits (202), Expect = 8e-18
 Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 4/96 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHL-NEKNKELLAPIHLAADLGHLDVLDTLLRL 763
               +H             ++  +RKG +L N+ ++    P+  A+  G ++ +  LL  
Sbjct: 2   DSLSIHQLAAQ---GELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW 58

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           GA  +++    ++AL   +    T  V +LL  + D
Sbjct: 59  GADPHILAKERESALSLASTGGYTDIVGLLLERDVD 94

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 80.9 bits (201), Expect = 1e-17
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 17/111 (15%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGAD-PSKKNRDGATPLDL-VREGDQDVSDLL-------- 1128
              +H+ AA+G+ D ++  L+ G +  +K +  G TPL      G+ +    L        
Sbjct: 4    LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63

Query: 1129 ----RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGE 1174
                   SAL  A+  G    V  LL  D +IN  D  G   TPL  A   
Sbjct: 64   ILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGG--TPLLYAVRG 112

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 80.5 bits (200), Expect = 1e-17
 Identities = 21/105 (20%), Positives = 32/105 (30%), Gaps = 23/105 (21%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            ++   ++N+ D    TPL  A        V  LL  GAD + +   G TP+DL       
Sbjct: 89   LERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDL------- 141

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTP 1167
                         A   G     Q +      +   +       P
Sbjct: 142  -------------AVALGYRKVQQVIENHILKLFQSNLVPA--DP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 79.8 bits (198), Expect = 3e-17
 Identities = 18/74 (24%), Positives = 34/74 (45%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
               L  A + G+ ++  +L++   ++N  D    TPL  A   + ++    LL+ GAD 
Sbjct: 69  RESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADL 128

Query: 274 TLHNCHSKSAIDVA 287
           T       + +D+A
Sbjct: 129 TTEADSGYTPMDLA 142

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 77.8 bits (193), Expect = 1e-16
 Identities = 15/60 (25%), Positives = 28/60 (46%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PL  A ++G  E    L++ GA+ + +   + + L  A++    ++  LLL    D 
Sbjct: 36  GFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDI 95

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 77.1 bits (191), Expect = 2e-16
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           PL  A    H +  E L+  GA++       +TP+  A +    +V  ++ +     
Sbjct: 105 PLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 73.6 bits (182), Expect = 4e-15
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGAN-VNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            +H   + G  +  +  ++ G N VN  D   FTPL  A++   +E    LL  GADP
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP 62

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 66.3 bits (163), Expect = 1e-12
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 32/104 (30%)

Query: 23  GGLHPLHNACSFGHADVVRLLLEADAN-PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEH 81
           G    +H   + G  D ++  L    N  N  D   FTPL  A+A G+ +          
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETV-------- 52

Query: 82  SSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                +++                  L  GADP +  +E ++ L
Sbjct: 53  -----RFL------------------LEWGADPHILAKERESAL 73

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 65.5 bits (161), Expect = 2e-12
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPL  AV          VE+L+ +GA L  +      P+ LA  LG+  V   +    
Sbjct: 102 GGTPLLYAV---RGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHI 158

Query: 765 AKVNLVDVLGQT 776
            K+   +++   
Sbjct: 159 LKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 48.6 bits (117), Expect = 2e-06
 Identities = 6/34 (17%), Positives = 15/34 (44%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTP 250
           P+  A + G+ +V +++      +   +L    P
Sbjct: 138 PMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 46.6 bits (112), Expect = 8e-06
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 1130 GNSALLDAAKKGNLGRVQKLLT--ADNINCRDAQGRNSTPLHLAAGEKRHL 1178
             + ++   A +G L ++++ L    + +N  D +G   TPL  A+     +
Sbjct: 2    DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGF--TPLIWAS-AFGEI 49

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  154 bits (393), Expect = 2e-43
 Identities = 49/205 (23%), Positives = 78/205 (38%), Gaps = 52/205 (25%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           +    + G+   V   L +  + +N  D  G   +PLH+A    R AVVE L+  GA + 
Sbjct: 9   IFTQCREGNAVAVRLWLDNTENDLNQGDDHGF--SPLHWACREGRSAVVEMLIMRGARI- 65

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              N  ++   TPLH AA  G   +   L L                   D         
Sbjct: 66  ---NVMNRGDDTPLHLAASHGHRDIVQKL-LQ---------------YKAD--------- 97

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              +NA +  G    PLH+         AC +G  +V E LV +GA V++ + +   P+ 
Sbjct: 98  ---INAVNEHGN--VPLHY---------ACFWGQDQVAEDLVANGALVSICNKYGEMPVD 143

Query: 583 EAA-------AKALLQHGADINLKN 600
           +A         +   + G ++N   
Sbjct: 144 KAKAPLRELLRERAEKMGQNLNRIP 168

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  150 bits (381), Expect = 1e-41
 Identities = 40/187 (21%), Positives = 72/187 (38%), Gaps = 53/187 (28%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLLAHGA-DVHSKDNATDKWGFTPLHEAAQKGRTQLSAL 490
           +      +           V   L +   D+    N  D  GF+PLH A ++GR+ +  +
Sbjct: 4   EFM--DDIFTQCREGNAVAVRLWLDNTENDL----NQGDDHGFSPLHWACREGRSAVVEM 57

Query: 491 LPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHN 550
           L +                +G              +N  +      TPLH AA       
Sbjct: 58  L-IM---------------RGAR------------INVMNRGDD--TPLHLAA------- 80

Query: 551 ACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDG 603
             S+GH ++ + L+++ A++N  +     PLH A        A+ L+ +GA +++ N  G
Sbjct: 81  --SHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYG 138

Query: 604 KTALDLA 610
           +  +D A
Sbjct: 139 EMPVDKA 145

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  113 bits (285), Expect = 6e-29
 Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 31/127 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            GR  VVE L+  GA I+  + G   PLH A S GH D+V+ LL+  A+ N  +     P
Sbjct: 49  EGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVP 108

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH A   G+  V                                   +A+GA   + N+ 
Sbjct: 109 LHYACFWGQDQVAE-------------------------------DLVANGALVSICNKY 137

Query: 121 GQTPLDL 127
           G+ P+D 
Sbjct: 138 GEMPVDK 144

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 97.5 bits (244), Expect = 2e-23
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 6/126 (4%)

Query: 676 LLEACRQGDPSRVKKFLTS--DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAH 733
           +   CR+G+   V+ +L +  + +N    + G +PLH A       R A+VE LI +GA 
Sbjct: 9   IFTQCREGNAVAVRLWLDNTENDLNQGDDH-GFSPLHWACRE---GRSAVVEMLIMRGAR 64

Query: 734 LNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL 793
           +N  N+    P+HLAA  GH D++  LL+  A +N V+  G   LH      + Q    L
Sbjct: 65  INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDL 124

Query: 794 LSHNAD 799
           +++ A 
Sbjct: 125 VANGAL 130

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 91.7 bits (229), Expect = 3e-21
 Identities = 21/72 (29%), Positives = 37/72 (51%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +G +D+V+ LL   A I+A ++ G  PLH AC +G   V   L+   A  +  + +   P
Sbjct: 82  HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMP 141

Query: 61  LHEAAAKGKTDV 72
           + +A A  +  +
Sbjct: 142 VDKAKAPLRELL 153

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 90.2 bits (225), Expect = 7e-21
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 17/126 (13%)

Query: 1064 VKHGAN-VNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGD 1121
            + +  N +N  D   F+PLH A  +G++ +V +L+  GA  +  NR   TPL L    G 
Sbjct: 25   LDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGH 84

Query: 1122 QDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPL 1168
            +D+   L             GN  L  A   G     + L+     ++  +  G    P+
Sbjct: 85   RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGE--MPV 142

Query: 1169 HLAAGE 1174
              A   
Sbjct: 143  DKAKAP 148

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 89.0 bits (222), Expect = 2e-20
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
              PLH A S+GH ++ + L++  A++NA++     PLH A    + +V   L++ GA  
Sbjct: 72  DDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALV 131

Query: 274 TLHNCHSKSAIDVA 287
           ++ N + +  +D A
Sbjct: 132 SICNKYGEMPVDKA 145

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 88.3 bits (220), Expect = 4e-20
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
            DTPLH A +      + IV+ L++  A +N  N+    P+H A   G   V + L+  G
Sbjct: 72  DDTPLHLAASH---GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANG 128

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A V++ +  G+  + +     +            +
Sbjct: 129 ALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQN 163

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 84.8 bits (211), Expect = 6e-19
 Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 7/87 (8%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +++ A++N  +     PLH A   G+  +   L+ +GA  S  N+ G  P+D       +
Sbjct: 92   LQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRE 151

Query: 1123 DVSDLLRGNSA------LLDAAKKGNL 1143
             + +               D   KG  
Sbjct: 152  LLRERAEKMGQNLNRIPYKDTFWKGTT 178

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 81.3 bits (202), Expect = 9e-18
 Identities = 27/60 (45%), Positives = 31/60 (51%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PLH AC  G   V EMLI  GA +N M+    TPLH AAS    ++   LL   AD 
Sbjct: 39  GFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI 98

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 80.2 bits (199), Expect = 2e-17
 Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAH-LNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
               +              V   +    + LN+ +    +P+H A   G   V++ L+  
Sbjct: 5   FMDDIFTQCRE---GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           GA++N+++    T LH  A       V+ LL + AD
Sbjct: 62  GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD 97

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 77.1 bits (191), Expect = 3e-16
 Identities = 18/69 (26%), Positives = 29/69 (42%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G VPLH AC +G  +V E L+  GA V+  + +   P+ +A +  R  +       G + 
Sbjct: 105 GNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164

Query: 274 TLHNCHSKS 282
                    
Sbjct: 165 NRIPYKDTF 173

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 74.4 bits (184), Expect = 2e-15
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 17/110 (15%)

Query: 1078 FTPLHEAAAKGKADIVRLLLQHGA-DPSKKNRDGATPLDL-VREGDQDVSDLL------- 1128
               +     +G A  VRL L +   D ++ +  G +PL    REG   V ++L       
Sbjct: 6    MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI 65

Query: 1129 -----RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                   ++ L  AA  G+   VQKLL    +IN  +  G    PLH A 
Sbjct: 66   NVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGN--VPLHYAC 113

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 72.9 bits (180), Expect = 9e-15
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +G+  V E L+A+GA +   +  G  P+  A +     +     +   N N        P
Sbjct: 115 WGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR------IP 168

Query: 61  LHEAAAKGKT 70
             +   KG T
Sbjct: 169 YKDTFWKGTT 178

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 72.5 bits (179), Expect = 1e-14
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGAN-VNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            +  +   C  G+     + +    N +N  D   F+PLH A  + R  V  +L+  GA 
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR 64

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 64.8 bits (159), Expect = 5e-12
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G+ PLH A    +  +  + E L+  GA ++  NK    P+  A       + +   ++G
Sbjct: 105 GNVPLHYAC---FWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMG 161

Query: 765 AKVNLVD 771
             +N + 
Sbjct: 162 QNLNRIP 168

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 64.8 bits (159), Expect = 6e-12
 Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 17/86 (19%)

Query: 403 LLEASKGGDMTVVTRLLSSCPH--IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD 460
           L  A   G   V   L++   +  +V+  +  G    P+  A    R  + E     G +
Sbjct: 109 LHYACFWGQDQVAEDLVA---NGALVSICNKYGE--MPVDKAKAPLRELLRERAEKMGQN 163

Query: 461 VHSKDNATDKWGFTPLHEAAQKGRTQ 486
           +    N        P  +   KG T+
Sbjct: 164 L----NRI------PYKDTFWKGTTR 179

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 62.4 bits (153), Expect = 3e-11
 Identities = 25/107 (23%), Positives = 36/107 (33%), Gaps = 34/107 (31%)

Query: 21  DDGGLHPLHNACSFGHADVVRLLLEADAN-PNTRDNWNFTPLHEAAAKGKTDVCIGIYFA 79
               +  +   C  G+A  VRL L+   N  N  D+  F+PLH A  +G++ V       
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAV------V 55

Query: 80  EHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
           E                           L   GA   + N+   TPL
Sbjct: 56  E--------------------------MLIMRGARINVMNRGDDTPL 76

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 49.7 bits (120), Expect = 7e-07
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 738 NKELLAPIHLAADLGHLDVLDTLLRLGA-KVNLVDVLGQTALHRTARDDKTQAVRVLLSH 796
           + E +  I      G+   +   L      +N  D  G + LH   R+ ++  V +L+  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 797 NAD 799
            A 
Sbjct: 62  GAR 64

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 47.4 bits (114), Expect = 5e-06
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 4/47 (8%)

Query: 1130 GNSALLDAAKKGNLGRVQKLL--TADNINCRDAQGRNSTPLHLAAGE 1174
                +    ++GN   V+  L  T +++N  D  G   +PLH A  E
Sbjct: 5    FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGF--SPLHWACRE 49

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  153 bits (390), Expect = 4e-43
 Identities = 74/187 (39%), Positives = 82/187 (43%), Gaps = 53/187 (28%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLL-AHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSAL 490
           +      L  AA    V  V+ L      +        +    TPLH AA   R  +   
Sbjct: 7   EAD--RQLLEAAKAGDVETVKKLCTVQSVNC----RDIEGRQSTPLHFAAGYNRVSVVEY 60

Query: 491 LPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHN 550
           L L                 G D            V+A+D  G            VPLHN
Sbjct: 61  L-LQ---------------HGAD------------VHAKDKGGL-----------VPLHN 81

Query: 551 ACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDG 603
           ACSYGHYEV E+LVKHGA VNVADLWKFTPLHEAA        K LLQHGAD   KN DG
Sbjct: 82  ACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDG 141

Query: 604 KTALDLA 610
            T LDL 
Sbjct: 142 NTPLDLV 148

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  148 bits (376), Expect = 3e-41
 Identities = 74/203 (36%), Positives = 96/203 (47%), Gaps = 51/203 (25%)

Query: 398 DLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH 457
           + + QLLEA+K GD+  V +L +     VNCRD++GR STPLHFAAGYNRV+VVEYLL H
Sbjct: 7   EADRQLLEAAKAGDVETVKKLCTV--QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH 64

Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKV 517
           GADV    +A DK G  PLH A   G  +++ LL +                 G      
Sbjct: 65  GADV----HAKDKGGLVPLHNACSYGHYEVAELL-VK---------------HGAV---- 100

Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK 577
                   VN  D      TPLH AA         + G YE+ ++L++HGA+    +   
Sbjct: 101 --------VNVADLWKF--TPLHEAA---------AKGKYEICKLLLQHGADPTKKNRDG 141

Query: 578 FTPLHEAA------AKALLQHGA 594
            TPL             L    A
Sbjct: 142 NTPLDLVKDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  110 bits (278), Expect = 5e-28
 Identities = 49/161 (30%), Positives = 65/161 (40%), Gaps = 52/161 (32%)

Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKV 517
           GA  +S+           L EAA+ G  +                              V
Sbjct: 1   GAMGNSE-------ADRQLLEAAKAGDVET-----------------------------V 24

Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK 577
           KKL   Q+VN RD  GR+STPLHFAA          Y    V E L++HGA+V+  D   
Sbjct: 25  KKLCTVQSVNCRDIEGRQSTPLHFAA---------GYNRVSVVEYLLQHGADVHAKDKGG 75

Query: 578 FTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
             PLH A        A+ L++HGA +N+ +    T L  A 
Sbjct: 76  LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAA 116

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  109 bits (274), Expect = 2e-27
 Identities = 59/127 (46%), Positives = 69/127 (54%), Gaps = 31/127 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           Y R  VVEYLL  GA +HA+D GGL PLHNACS+GH +V  LL++  A  N  D W FTP
Sbjct: 52  YNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTP 111

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LHEAAAKGK ++C                                  L HGADP  KN++
Sbjct: 112 LHEAAAKGKYEIC-------------------------------KLLLQHGADPTKKNRD 140

Query: 121 GQTPLDL 127
           G TPLDL
Sbjct: 141 GNTPLDL 147

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 99.0 bits (248), Expect = 5e-24
 Identities = 57/71 (80%), Positives = 65/71 (91%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            VKHGA VNVADLWKFTPLHEAAAKGK +I +LLLQHGADP+KKNRDG TPLDLV++GD D
Sbjct: 95   VKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD 154

Query: 1124 VSDLLRGNSAL 1134
            + DLLRG++AL
Sbjct: 155  IQDLLRGDAAL 165

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 94.4 bits (236), Expect = 2e-22
 Identities = 46/74 (62%), Positives = 56/74 (75%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           GLVPLHNACSYGH+EV E+L+K GA VN  DLW+FTPLHEAA+K + E+C LLL  GADP
Sbjct: 75  GLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP 134

Query: 274 TLHNCHSKSAIDVA 287
           T  N    + +D+ 
Sbjct: 135 TKKNRDGNTPLDLV 148

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 92.5 bits (231), Expect = 1e-21
 Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 676 LLEACRQGDPSRVKKFLTSDVVNFKHP-YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHL 734
           LLEA + GD   VKK  T   VN +       TPLH A       R ++VE L++ GA +
Sbjct: 12  LLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGY---NRVSVVEYLLQHGADV 68

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
           + K+K  L P+H A   GH +V + L++ GA VN+ D+   T LH  A   K +  ++LL
Sbjct: 69  HAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLL 128

Query: 795 SHNAD 799
            H AD
Sbjct: 129 QHGAD 133

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 88.2 bits (220), Expect = 2e-20
 Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 16/122 (13%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQD 1123
                N    +  + TPLH AA   +  +V  LLQHGAD   K++ G  PL      G  +
Sbjct: 30   VQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYE 89

Query: 1124 VSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHL 1170
            V++LL               + L +AA KG     + LL    +   ++  G   TPL L
Sbjct: 90   VAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGN--TPLDL 147

Query: 1171 AA 1172
              
Sbjct: 148  VK 149

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 82.4 bits (205), Expect = 3e-18
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           YG  +V E L+  GA ++  D     PLH A + G  ++ +LLL+  A+P  ++    TP
Sbjct: 85  YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTP 144

Query: 61  LHEAAAKGKTDV 72
           L      G TD+
Sbjct: 145 LD-LVKDGDTDI 155

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 81.3 bits (202), Expect = 7e-18
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLI-RKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
            D  L  A  +        V+ L   +  +  +       P+H AA    + V++ LL+ 
Sbjct: 8   ADRQLLEAAKA---GDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH 64

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           GA V+  D  G   LH        +   +L+ H A 
Sbjct: 65  GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV 100

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 81.3 bits (202), Expect = 7e-18
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G  PLH A          + E L++ GA +N  +     P+H AA  G  ++   LL+ G
Sbjct: 75  GLVPLHNAC---SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG 131

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           A     +  G T L    +D  T    +L    A
Sbjct: 132 ADPTKKNRDGNTPLD-LVKDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 76.7 bits (190), Expect = 3e-16
 Identities = 24/56 (42%), Positives = 29/56 (51%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           PLH A  Y    V E L++ GA+V+A D     PLH A S    EV  LL+  GA 
Sbjct: 45  PLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV 100

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 72.4 bits (179), Expect = 9e-15
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKA-GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            L  A   G  E  + L      N   ++  Q TPLH AA  +R+ V   LL  GAD
Sbjct: 11  QLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD 67

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 69.0 bits (170), Expect = 1e-13
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
           PLH A + G +E+ ++L++ GA+    +    TPL         ++  LL  + A
Sbjct: 111 PLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLD-LVKDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 61.3 bits (150), Expect = 6e-11
 Identities = 26/114 (22%), Positives = 33/114 (28%), Gaps = 37/114 (32%)

Query: 14  GASIHARDDGGLHPLHNACSFGHADVVRLLLEA-DANPNTRDNWNFTPLHEAAAKGKTDV 72
           GA     +      L  A   G  + V+ L      N    +    TPLH AA   +  V
Sbjct: 1   GAMG---NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 73  CIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                  E                          YL  HGAD   K++ G  PL
Sbjct: 58  ------VE--------------------------YLLQHGADVHAKDKGGLVPL 79

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 53.5 bits (130), Expect = 3e-08
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 731 GAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL-GAKVNLVDVLGQTALHRTARDDKTQA 789
           GA  N +       +  AA  G ++ +  L  +       ++    T LH  A  ++   
Sbjct: 1   GAMGNSEAD---RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 790 VRVLLSHNAD 799
           V  LL H AD
Sbjct: 58  VEYLLQHGAD 67

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 50.1 bits (121), Expect = 5e-07
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADA 48
            G+ ++ + LL  GA    ++  G  PL      G  D+  LL    A
Sbjct: 118 KGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 48.9 bits (118), Expect = 1e-06
 Identities = 24/45 (53%), Positives = 32/45 (71%)

Query: 1130 GNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGE 1174
             +  LL+AAK G++  V+KL T  ++NCRD +GR STPLH AAG 
Sbjct: 8    ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGY 52

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  152 bits (386), Expect = 1e-42
 Identities = 67/195 (34%), Positives = 90/195 (46%), Gaps = 52/195 (26%)

Query: 424 HIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG 483
           H  +    D      L  AA   R   V  L+A+GADV    NA D  G+TPLH AA  G
Sbjct: 5   HHHHHHGSDLG--KKLLEAARAGRDDEVRILMANGADV----NAEDASGWTPLHLAAFNG 58

Query: 484 RTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAA 543
             ++  +L L                 G D            VNA D AG   TPL  AA
Sbjct: 59  HLEIVEVL-LK---------------NGAD------------VNAVDHAGM--TPLRLAA 88

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADI 596
                     +GH E+ E+L+K+GA+VN  D+   TPLH AA        + LL++GAD+
Sbjct: 89  ---------LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV 139

Query: 597 NLKNTDGKTALDLAV 611
           N ++  GKTA D+++
Sbjct: 140 NAQDKFGKTAFDISI 154

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  126 bits (320), Expect = 1e-33
 Identities = 64/199 (32%), Positives = 85/199 (42%), Gaps = 57/199 (28%)

Query: 403 LLEASKGGDMTVVTRLLSSCPH--IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD 460
           LLEA++ G    V  L++   +   VN  D  G   TPLH AA    + +VE LL +GAD
Sbjct: 18  LLEAARAGRDDEVRILMA---NGADVNAEDASGW--TPLHLAAFNGHLEIVEVLLKNGAD 72

Query: 461 VHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKL 520
           V    NA D  G TPL  AA  G  ++  +L L                 G D       
Sbjct: 73  V----NAVDHAGMTPLRLAALFGHLEIVEVL-LK---------------NGAD------- 105

Query: 521 VNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTP 580
                VNA D  G   TPLH AA          +GH E+ E+L+K+GA+VN  D +  T 
Sbjct: 106 -----VNANDMEGH--TPLHLAA---------MFGHLEIVEVLLKNGADVNAQDKFGKTA 149

Query: 581 LHEAA-------AKALLQH 592
              +        A+ L + 
Sbjct: 150 FDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 92.4 bits (231), Expect = 1e-21
 Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 33/126 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            GR D V  L+A+GA ++A D  G  PLH A   GH ++V +LL+  A+ N  D+   TP
Sbjct: 24  AGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTP 83

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQ 119
           L  AA  G  ++       E                           L  +GAD    + 
Sbjct: 84  LRLAALFGHLEI------VE--------------------------VLLKNGADVNANDM 111

Query: 120 EGQTPL 125
           EG TPL
Sbjct: 112 EGHTPL 117

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 92.4 bits (231), Expect = 1e-21
 Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 33/128 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  ++VE LL +GA ++A D  G+ PL  A  FGH ++V +LL+  A+ N  D    TP
Sbjct: 57  NGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTP 116

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQ 119
           LH AA  G  ++       E                           L  +GAD   +++
Sbjct: 117 LHLAAMFGHLEI------VE--------------------------VLLKNGADVNAQDK 144

Query: 120 EGQTPLDL 127
            G+T  D+
Sbjct: 145 FGKTAFDI 152

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 92.0 bits (230), Expect = 1e-21
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 16/123 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            + +GA+VN  D   +TPLH AA  G  +IV +LL++GAD +  +  G TPL L    G  
Sbjct: 34   MANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL 93

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            ++ ++L             G++ L  AA  G+L  V+ LL    ++N +D  G+  T   
Sbjct: 94   EIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGK--TAFD 151

Query: 1170 LAA 1172
            ++ 
Sbjct: 152  ISI 154

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 89.3 bits (223), Expect = 1e-20
 Identities = 26/72 (36%), Positives = 41/72 (56%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +G  ++VE LL +GA ++A D  G  PLH A  FGH ++V +LL+  A+ N +D +  T 
Sbjct: 90  FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTA 149

Query: 61  LHEAAAKGKTDV 72
              +   G  D+
Sbjct: 150 FDISIDNGNEDL 161

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 87.8 bits (219), Expect = 4e-20
 Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
            +  H       L  A  +    R   V  L+  GA +N ++     P+HLAA  GHL++
Sbjct: 6   HHHHHGSDLGKKLLEAARA---GRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEI 62

Query: 757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           ++ LL+ GA VN VD  G T L   A     + V VLL + AD
Sbjct: 63  VEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD 105

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 86.6 bits (216), Expect = 1e-19
 Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 23/125 (18%)

Query: 1062 HNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREG 1120
            H+  HG+++          L EAA  G+ D VR+L+ +GAD + ++  G TPL L    G
Sbjct: 6    HHHHHGSDLG-------KKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNG 58

Query: 1121 DQDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTP 1167
              ++ ++L             G + L  AA  G+L  V+ LL    ++N  D +G   TP
Sbjct: 59   HLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGH--TP 116

Query: 1168 LHLAA 1172
            LHLAA
Sbjct: 117  LHLAA 121

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 85.9 bits (214), Expect = 2e-19
 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPLH A    +     IVE L++ GA +N  +   + P+ LAA  GHL++++ LL+ G
Sbjct: 47  GWTPLHLAA---FNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNG 103

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A VN  D+ G T LH  A     + V VLL + AD
Sbjct: 104 ADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD 138

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 85.1 bits (212), Expect = 4e-19
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPL  A          IVE L++ GA +N  + E   P+HLAA  GHL++++ LL+ G
Sbjct: 80  GMTPLRLAA---LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG 136

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN 797
           A VN  D  G+TA   +  +       +L   N
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 78.2 bits (194), Expect = 9e-17
 Identities = 28/56 (50%), Positives = 36/56 (64%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           PL  A  +GH E+ E+L+K GA+VNA D+   TPLH AA    LE+  +LL  GAD
Sbjct: 83  PLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD 138

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 77.4 bits (192), Expect = 2e-16
 Identities = 29/59 (49%), Positives = 36/59 (61%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G  PLH A   GH E+ E+L+K GA+VNA+D    TPL  AA    LE+  +LL  GAD
Sbjct: 47  GWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD 105

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 77.0 bits (191), Expect = 2e-16
 Identities = 23/56 (41%), Positives = 30/56 (53%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            L  A   G  +   +L+  GA+VNA D   +TPLH AA    LE+  +LL  GAD
Sbjct: 17  KLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD 72

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 76.2 bits (189), Expect = 4e-16
 Identities = 26/66 (39%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K+GA+VN  D+   TPLH AA  G  +IV +LL++GAD + +++ G T  D+ +  G++
Sbjct: 100  LKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNE 159

Query: 1123 DVSDLL 1128
            D++++L
Sbjct: 160  DLAEIL 165

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 68.5 bits (169), Expect = 2e-13
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLS 268
           PLH A  +GH E+ E+L+K GA+VNA D +  T    +      ++  +L  
Sbjct: 116 PLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 65.1 bits (160), Expect = 3e-12
 Identities = 28/114 (24%), Positives = 37/114 (32%), Gaps = 34/114 (29%)

Query: 14  GASIHARDDG-GLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDV 72
           G+  H          L  A   G  D VR+L+   A+ N  D   +TPLH AA  G  ++
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEI 62

Query: 73  CIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                  E                           L  +GAD    +  G TPL
Sbjct: 63  ------VE--------------------------VLLKNGADVNAVDHAGMTPL 84

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 62.8 bits (154), Expect = 2e-11
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 730 KGAH-LNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQ 788
           +G+H  +    +L   +  AA  G  D +  L+  GA VN  D  G T LH  A +   +
Sbjct: 2   RGSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLE 61

Query: 789 AVRVLLSHNAD 799
            V VLL + AD
Sbjct: 62  IVEVLLKNGAD 72

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 57.0 bits (139), Expect = 2e-09
 Identities = 13/47 (27%), Positives = 26/47 (55%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEAD 47
           +G  ++VE LL +GA ++A+D  G      +   G+ D+  +L + +
Sbjct: 123 FGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 48.9 bits (118), Expect = 1e-06
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH 1099
            +K+GA+VN  D +  T    +   G  D+  +L + 
Sbjct: 133  LKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 41.2 bits (98), Expect = 4e-04
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 7/42 (16%)

Query: 231 EMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
                 G+++          L EAA   R +   +L++ GAD
Sbjct: 5   HHHHHHGSDLG-------KKLLEAARAGRDDEVRILMANGAD 39

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  152 bits (386), Expect = 2e-42
 Identities = 44/186 (23%), Positives = 65/186 (34%), Gaps = 50/186 (26%)

Query: 433 GRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLP 492
           G +S  +H  A    +  +   +     +    N TD+ GFTPL  AA  G+  +   L 
Sbjct: 1   GANSLSVHQLAAQGEMLYLATRIEQENVI----NHTDEEGFTPLMWAAAHGQIAVVEFL- 55

Query: 493 LSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNAC 552
           L                 G D                       + L  A          
Sbjct: 56  LQ---------------NGAD------------PQLLGKGRE--SALSLAC--------- 77

Query: 553 SYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKT 605
           S G+ ++ +ML+  G +VN  D    TPL  A         K LL+ GAD  ++   G  
Sbjct: 78  SKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN 137

Query: 606 ALDLAV 611
           ++DLAV
Sbjct: 138 SMDLAV 143

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  144 bits (367), Expect = 6e-40
 Identities = 45/207 (21%), Positives = 74/207 (35%), Gaps = 53/207 (25%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           + + +  G+M  +   +     I N  D +G   TPL +AA + ++AVVE+LL +GAD  
Sbjct: 7   VHQLAAQGEMLYLATRIEQENVI-NHTDEEGF--TPLMWAAAHGQIAVVEFLLQNGADP- 62

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
                  K   + L  A  KG T +  +L L                 G D         
Sbjct: 63  ---QLLGKGRESALSLACSKGYTDIVKML-LD---------------CGVD--------- 94

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              VN  D  G   TPL +A             H +  +ML++ GA+  +     +  + 
Sbjct: 95  ---VNEYDWNGG--TPLLYAV---------HGNHVKCVKMLLESGADPTIETDSGYNSMD 140

Query: 583 EAA-------AKALLQHGADINLKNTD 602
            A         + +  H   +     +
Sbjct: 141 LAVALGYRSVQQVIESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 99.8 bits (250), Expect = 3e-24
 Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 34/145 (23%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +G+  VVE+LL +GA       G    L  ACS G+ D+V++LL+   + N  D    TP
Sbjct: 46  HGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTP 105

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           L  A                      + +                  L  GADP ++   
Sbjct: 106 LLYAVHGNHVKCV-------------KML------------------LESGADPTIETDS 134

Query: 121 GQTPLDLTVAE---DVRSLLQDAMA 142
           G   +DL VA     V+ +++  + 
Sbjct: 135 GYNSMDLAVALGYRSVQQVIESHLL 159

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 96.3 bits (241), Expect = 4e-23
 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 16/123 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++    +N  D   FTPL  AAA G+  +V  LLQ+GADP    +   + L L   +G  
Sbjct: 23   IEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            D+  +L             G + LL A    ++  V+ LL +  +       G     + 
Sbjct: 83   DIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGY--NSMD 140

Query: 1170 LAA 1172
            LA 
Sbjct: 141  LAV 143

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 89.4 bits (223), Expect = 1e-20
 Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 5/125 (4%)

Query: 676 LLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHL 734
           + +   QG+   +   +  +  +N      G TPL  A       + A+VE L++ GA  
Sbjct: 7   VHQLAAQGEMLYLATRIEQENVINHTDEE-GFTPLMWAA---AHGQIAVVEFLLQNGADP 62

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
               K   + + LA   G+ D++  LL  G  VN  D  G T L      +  + V++LL
Sbjct: 63  QLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLL 122

Query: 795 SHNAD 799
              AD
Sbjct: 123 ESGAD 127

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 87.1 bits (217), Expect = 6e-20
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
               +H             + + I +   +N  ++E   P+  AA  G + V++ LL+ G
Sbjct: 3   NSLSVHQLAAQ---GEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG 59

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A   L+    ++AL        T  V++LL    D
Sbjct: 60  ADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVD 94

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 85.1 bits (212), Expect = 3e-19
 Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
            ++ L  A +        IV+ L+  G  +NE +     P+  A    H+  +  LL  G
Sbjct: 69  RESALSLACSK---GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 125

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A   +    G  ++            +V+ SH   
Sbjct: 126 ADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 83.6 bits (208), Expect = 1e-18
 Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 16/108 (14%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL--------- 1128
              +H+ AA+G+   +   ++     +  + +G TPL      G   V + L         
Sbjct: 5    LSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL 64

Query: 1129 ---RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                  SAL  A  KG    V+ LL    ++N  D  G   TPL  A 
Sbjct: 65   LGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGG--TPLLYAV 110

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 80.9 bits (201), Expect = 9e-18
 Identities = 24/74 (32%), Positives = 39/74 (52%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
               L  ACS G+ ++ +ML+  G +VN  D    TPL  A   + ++   +LL  GADP
Sbjct: 69  RESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP 128

Query: 274 TLHNCHSKSAIDVA 287
           T+      +++D+A
Sbjct: 129 TIETDSGYNSMDLA 142

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 80.1 bits (199), Expect = 2e-17
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +  G +VN  D    TPL  A        V++LL+ GADP+ +   G   +DL V  G +
Sbjct: 89   LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYR 148

Query: 1123 DVSDLLRGNSALLDAAKK 1140
             V  ++  +   L    K
Sbjct: 149  SVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 78.6 bits (195), Expect = 6e-17
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PL  A ++G   V E L++ GA+   +   + + L  A SK   ++  +LL  G D 
Sbjct: 36  GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV 95

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 78.2 bits (194), Expect = 9e-17
 Identities = 18/57 (31%), Positives = 25/57 (43%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            +H   + G        I+    +N  D   FTPL  AA+  ++ V   LL  GADP
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP 62

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 75.1 bits (186), Expect = 9e-16
 Identities = 11/56 (19%), Positives = 22/56 (39%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           PL  A    H +  +ML+++GA+        +  +  A +     V  ++ S    
Sbjct: 105 PLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 69.7 bits (172), Expect = 8e-14
 Identities = 22/100 (22%), Positives = 33/100 (33%), Gaps = 33/100 (33%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSN 86
            +H   + G    +   +E +   N  D   FTPL  AAA G+  V       E      
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAV------VE------ 53

Query: 87  QYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                               +L  +GADP L  +  ++ L
Sbjct: 54  --------------------FLLQNGADPQLLGKGRESAL 73

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 69.3 bits (171), Expect = 9e-14
 Identities = 11/55 (20%), Positives = 19/55 (34%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDN 55
                 V+ LL SGA      D G + +  A + G+  V +++            
Sbjct: 112 GNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 62.0 bits (152), Expect = 3e-11
 Identities = 6/46 (13%), Positives = 19/46 (41%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRD 1109
            ++ GA+  +     +  +  A A G   + +++  H     +  ++
Sbjct: 122  LESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 60.5 bits (148), Expect = 1e-10
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPL  AV   +      V+ L+  GA    +       + LA  LG+  V   +    
Sbjct: 102 GGTPLLYAV---HGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 158

Query: 765 AKVN 768
            K+ 
Sbjct: 159 LKLL 162

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 44.7 bits (107), Expect = 3e-05
 Identities = 3/28 (10%), Positives = 10/28 (35%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMD 244
            +  A + G+  V +++      +    
Sbjct: 138 SMDLAVALGYRSVQQVIESHLLKLLQNI 165

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 42.0 bits (100), Expect = 2e-04
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 1129 RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
              + ++   A +G +  +   +  +  IN  D +G   TPL  AA
Sbjct: 2    ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGF--TPLMWAA 44

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  158 bits (403), Expect = 2e-42
 Identities = 72/422 (17%), Positives = 113/422 (26%), Gaps = 118/422 (27%)

Query: 209 QAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLS 268
           Q++      L  A   G+ +            N +  +   P  +        +     +
Sbjct: 32  QSITSSQHSLLEASYDGYIKR---------QRNELQHYSLYPNPQGYGNGNDFLGDFNHT 82

Query: 269 EGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNF 328
               PT     S   +                 G                + +T + VN 
Sbjct: 83  NLQIPTEPEPESPIKLHTE------------AAGS--YAIT---------EPITRESVNI 119

Query: 329 KHPYTGDTPL--------PGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQ 380
             P    T L               ++ + KE I       A V    D       T L 
Sbjct: 120 IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI----AAGADV-NAMDCD---ENTPLM 171

Query: 381 VAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLH 440
           +A    ++       +V     L+    G D                  +   R  + LH
Sbjct: 172 LAVLARRR------RLVAY---LM--KAGAD--------------PTIYNKSER--SALH 204

Query: 441 FAAGYNRVAVVEYLLAH---GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSA 497
            AA      ++ Y+L       D+       D+ G T L   A        A   L    
Sbjct: 205 QAAANRDFGMMVYMLNSTKLKGDI----EELDRNGMTALMIVAHNEGRDQVASAKL---- 256

Query: 498 ANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHY 557
                  L E  KG  +            ++    GR  T LH+AA            + 
Sbjct: 257 -------LVE--KGAKV----DYDGAARKDSEKYKGR--TALHYAA---------QVSNM 292

Query: 558 EVTEMLVKH-GANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDL 609
            + + LV   G+N +  D    TP+  AA          L+Q GA +   +    TA  L
Sbjct: 293 PIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQL 352

Query: 610 AV 611
           A 
Sbjct: 353 AQ 354

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  138 bits (350), Expect = 2e-35
 Identities = 41/269 (15%), Positives = 76/269 (28%), Gaps = 61/269 (22%)

Query: 359 EMQATVREHRDN-GQSGGYTALQVAGENSKKLLQEPPSVVDLESQ-----LLEASKGGDM 412
            M+   +  +++   +    +L  A  +            +           +    G+ 
Sbjct: 20  PMENEEKNRKNHQSITSSQHSLLEASYD-----GYIKRQRNELQHYSLYPNPQGYGNGND 74

Query: 413 TVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWG 472
            +      +   I    + +      LH  A     A+ E +     ++    +      
Sbjct: 75  FLG-DFNHTNLQIPTEPEPESP--IKLHTEA-AGSYAITEPITRESVNIIDPRH-----N 125

Query: 473 FTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTA 532
            T LH  A     + S  L +  +              G D            VNA D  
Sbjct: 126 RTVLHWIASNSSAEKSEDLIVHEAK--------ECIAAGAD------------VNAMDCD 165

Query: 533 GRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA------- 585
               TPL  A                +   L+K GA+  + +  + + LH+AA       
Sbjct: 166 EN--TPLMLAV---------LARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGM 214

Query: 586 AKALLQH---GADINLKNTDGKTALDLAV 611
              +L       DI   + +G TAL +  
Sbjct: 215 MVYMLNSTKLKGDIEELDRNGMTALMIVA 243

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  123 bits (311), Expect = 2e-30
 Identities = 67/298 (22%), Positives = 103/298 (34%), Gaps = 83/298 (27%)

Query: 217 PLHNACSYGHFEVTEMLI--------KAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLS 268
            LH   S    E +E LI         AGA+VNAMD  + TPL  A    R  + + L+ 
Sbjct: 128 VLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMK 187

Query: 269 EGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV--- 325
            GADPT++N   +SA                     L +A    D   +  ++ +     
Sbjct: 188 AGADPTIYNKSERSA---------------------LHQAAANRDF-GMMVYMLNSTKLK 225

Query: 326 --VNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAE----------EMQATVREHRDNGQS 373
             +       G T     L+I   ++ ++ +  A+             A  ++       
Sbjct: 226 GDIEELDRN-GMTA----LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKY--- 277

Query: 374 GGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDG 433
            G TAL  A + S         +V    + L   KG +               + +D DG
Sbjct: 278 KGRTALHYAAQVSNM------PIV----KYLVGEKGSN--------------KDKQDEDG 313

Query: 434 RHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           +  TP+  AA   R+ VV YL+  GA V     A D    T    A       +  + 
Sbjct: 314 K--TPIMLAAQEGRIEVVMYLIQQGASV----EAVDATDHTARQLAQANNHHNIVDIF 365

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 87.3 bits (217), Expect = 3e-18
 Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 26/135 (19%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +  GA+VN  D  + TPL  A    +  +V  L++ GADP+  N+   + L       D 
Sbjct: 153  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 212

Query: 1123 DVSDLL---------------RGNSALLDAAKKGNLGRVQ--KLLTAD--NINCRDAQGR 1163
             +   +                G +AL+  A      +V   KLL      ++   A  +
Sbjct: 213  GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 272

Query: 1164 NS------TPLHLAA 1172
            +S      T LH AA
Sbjct: 273  DSEKYKGRTALHYAA 287

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 86.2 bits (214), Expect = 7e-18
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 4/98 (4%)

Query: 703 YTGDTPLHCAVTSPYPKRKAIVESLIR-KGAHLNEKNKELLAPIHLAADLGHLDVLDTLL 761
           Y G T LH A          IV+ L+  KG++ ++++++   PI LAA  G ++V+  L+
Sbjct: 277 YKGRTALHYAAQV---SNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLI 333

Query: 762 RLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           + GA V  VD    TA      ++    V +      +
Sbjct: 334 QQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 83.5 bits (207), Expect = 5e-17
 Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 28/134 (20%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH--------GADPSKKNRDGATPLD 1115
             +   N+        T LH  A+   A+    L+ H        GAD +  + D  TPL 
Sbjct: 113  TRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLM 171

Query: 1116 L-VREGDQDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD----NINCR 1158
            L V    + +   L               SAL  AA   + G +  +L +     +I   
Sbjct: 172  LAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEEL 231

Query: 1159 DAQGRNSTPLHLAA 1172
            D  G   T L + A
Sbjct: 232  DRNGM--TALMIVA 243

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 82.3 bits (204), Expect = 1e-16
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 8/80 (10%)

Query: 1   YGRKDVVEYLLAS--------GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNT 52
               +  E L+          GA ++A D     PL  A       +V  L++A A+P  
Sbjct: 135 NSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI 194

Query: 53  RDNWNFTPLHEAAAKGKTDV 72
            +    + LH+AAA     +
Sbjct: 195 YNKSERSALHQAAANRDFGM 214

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 81.5 bits (202), Expect = 2e-16
 Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 21/144 (14%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEAD---ANPNTRDNWN 57
             R+ +V YL+ +GA     +      LH A +     ++  +L +     +    D   
Sbjct: 176 ARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNG 235

Query: 58  FTPLHEAAAKGKTD-VCIGIYFAEHSSKSNQYVYGIG------GGTGCPMH-------KD 103
            T L   A     D V       E  +K +             G T   +H         
Sbjct: 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRT--ALHYAAQVSNMP 293

Query: 104 RSCYL--AHGADPFLKNQEGQTPL 125
              YL    G++   ++++G+TP+
Sbjct: 294 IVKYLVGEKGSNKDKQDEDGKTPI 317

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 81.5 bits (202), Expect = 2e-16
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 1   YGRKDVVEYLLAS-GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
                +V+YL+   G++   +D+ G  P+  A   G  +VV  L++  A+    D  + T
Sbjct: 289 VSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHT 348

Query: 60  PLHEAAAKGKTDV 72
               A A    ++
Sbjct: 349 ARQLAQANNHHNI 361

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 81.2 bits (201), Expect = 3e-16
 Identities = 17/133 (12%), Positives = 36/133 (27%), Gaps = 23/133 (17%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVS 1125
                 N    +   P  +    G   +      +   P++   +    L     G   ++
Sbjct: 50   IKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSYAIT 109

Query: 1126 DLL-----------RGNSALLDAAKKGNLGRVQKLLTAD---------NINCRDAQGRNS 1165
            + +              + L   A   +  + + L+  +         ++N  D      
Sbjct: 110  EPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDEN-- 167

Query: 1166 TPLHLAAGEKRHL 1178
            TPL LA    R  
Sbjct: 168  TPLMLAV-LARRR 179

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 79.2 bits (196), Expect = 1e-15
 Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 9/104 (8%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLN--------EKNKELLAPIHLAADLGHLDV 756
           G T L     +    + A  + L+ KGA ++         +  +    +H AA + ++ +
Sbjct: 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPI 294

Query: 757 LDTLLR-LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           +  L+   G+  +  D  G+T +   A++ + + V  L+   A 
Sbjct: 295 VKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS 338

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 78.5 bits (194), Expect = 2e-15
 Identities = 26/142 (18%), Positives = 45/142 (31%), Gaps = 29/142 (20%)

Query: 1063 NVKHGANVNVADLWKFTPLHEAAAKGKAD---IVRLLLQHGAD--------PSKKNRDGA 1111
            + K   ++   D    T L   A     D     +LL++ GA            +   G 
Sbjct: 221  STKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGR 280

Query: 1112 TPLDL-VREGDQDVSDLL-------------RGNSALLDAAKKGNLGRVQKLLTAD-NIN 1156
            T L    +  +  +   L              G + ++ AA++G +  V  L+    ++ 
Sbjct: 281  TALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 340

Query: 1157 CRDAQGRNSTPLHLAAGEKRHL 1178
              DA     T   LA     H 
Sbjct: 341  AVDATDH--TARQLAQ-ANNHH 359

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 76.9 bits (190), Expect = 7e-15
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 11/117 (9%)

Query: 690 KFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIR--------KGAHLNEKNKEL 741
           + +T + VN   P    T LH   ++         E LI          GA +N  + + 
Sbjct: 110 EPITRESVNIIDPRHNRTVLHWIASN---SSAEKSEDLIVHEAKECIAAGADVNAMDCDE 166

Query: 742 LAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
             P+ LA       ++  L++ GA   + +   ++ALH+ A +     +  +L+   
Sbjct: 167 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTK 223

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 76.9 bits (190), Expect = 7e-15
 Identities = 22/143 (15%), Positives = 40/143 (27%), Gaps = 28/143 (19%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G   + ++   +       +      LH   + G   +   +     N       N T 
Sbjct: 71  NGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNIID-PRHNRTV 128

Query: 61  LHEAAAKGKTDVCIGIYFAEH-SSKSNQYVYGIG---------GGTGCPMH-------KD 103
           LH  A+    +       +E       +     G           T  P+        + 
Sbjct: 129 LHWIASNSSAEK------SEDLIVHEAKECIAAGADVNAMDCDENT--PLMLAVLARRRR 180

Query: 104 RSCYL-AHGADPFLKNQEGQTPL 125
              YL   GADP + N+  ++ L
Sbjct: 181 LVAYLMKAGADPTIYNKSERSAL 203

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 76.1 bits (188), Expect = 1e-14
 Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 17/142 (11%)

Query: 668 KDEFKGHCLLEACRQGDPSRVKKFLTS--DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVE 725
              +  +   +    G+   +  F  +   +     P      LH           AI E
Sbjct: 57  LQHYSLYPNPQGYGNGN-DFLGDFNHTNLQIPTEPEPE-SPIKLHTEAAG----SYAITE 110

Query: 726 SLIRKGAHLNEKNKELLAPIHLAADLGHLDV--------LDTLLRLGAKVNLVDVLGQTA 777
            + R+  ++ +        +H  A     +             +  GA VN +D    T 
Sbjct: 111 PITRESVNIIDPRHNR-TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTP 169

Query: 778 LHRTARDDKTQAVRVLLSHNAD 799
           L       + + V  L+   AD
Sbjct: 170 LMLAVLARRRRLVAYLMKAGAD 191

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 76.1 bits (188), Expect = 1e-14
 Identities = 26/152 (17%), Positives = 40/152 (26%), Gaps = 33/152 (21%)

Query: 1   YGRKDVVEYLL---ASGASIHARDDGGLHPLHNACSFGHAD---VVRLLLEADANPNTR- 53
                ++ Y+L        I   D  G+  L         D     +LL+E  A  +   
Sbjct: 209 NRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDG 268

Query: 54  -------DNWNFTPLHEAAAKGKTDVC---IGIYFAEHSSKSNQYVYGIGGGTGCPMH-- 101
                       T LH AA      +    +G   +    +         G T  P+   
Sbjct: 269 AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDED------GKT--PIMLA 320

Query: 102 -----KDRSCYL-AHGADPFLKNQEGQTPLDL 127
                 +   YL   GA     +    T   L
Sbjct: 321 AQEGRIEVVMYLIQQGASVEAVDATDHTARQL 352

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 75.0 bits (185), Expect = 3e-14
 Identities = 26/151 (17%), Positives = 43/151 (28%), Gaps = 25/151 (16%)

Query: 663 FMPRIKDEFKGHC-----------LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHC 711
           +MP +++E K              LLEA   G   R +  L               P   
Sbjct: 17  WMPPMENEEKNRKNHQSITSSQHSLLEASYDGYIKRQRNELQHY---------SLYPNPQ 67

Query: 712 AVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVD 771
              +       + +          E   E    +H  A  G   + + + R    +    
Sbjct: 68  GYGNG---NDFLGDFNHTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNIIDPR 123

Query: 772 VLGQTALHRTARDDKTQAVRVLLSHNADTSI 802
              +T LH  A +   +    L+ H A   I
Sbjct: 124 -HNRTVLHWIASNSSAEKSEDLIVHEAKECI 153

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 73.1 bits (180), Expect = 1e-13
 Identities = 14/56 (25%), Positives = 23/56 (41%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           P+  A   G  EV   LI+ GA+V A+D    T    A + +   +  +      +
Sbjct: 316 PIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 72.7 bits (179), Expect = 1e-13
 Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 18/110 (16%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRK---GAHLNEKNKELLAPIHLAADLGHLDVLDT-- 759
             + LH A  +   +   ++  ++        + E ++  +  + + A     D + +  
Sbjct: 199 ERSALHQAAAN---RDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAK 255

Query: 760 -LLRLGAKVNL--------VDVLGQTALHRTARDDKTQAVRVLLSHN-AD 799
            L+  GAKV+             G+TALH  A+      V+ L+    ++
Sbjct: 256 LLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 305

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 69.6 bits (171), Expect = 2e-12
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQD 1123
            + G+N +  D    TP+  AA +G+ ++V  L+Q GA     +    T   L       +
Sbjct: 301  EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHN 360

Query: 1124 VSDLL 1128
            + D+ 
Sbjct: 361  IVDIF 365

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 60.0 bits (146), Expect = 2e-09
 Identities = 14/49 (28%), Positives = 21/49 (42%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN 49
            GR +VV YL+  GAS+ A D         A +  H ++V +       
Sbjct: 323 EGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 58.4 bits (142), Expect = 7e-09
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TP+  A       R  +V  LI++GA +   +        LA    H +++D   R  
Sbjct: 313 GKTPIMLAAQE---GRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 369

Query: 765 AKV 767
            + 
Sbjct: 370 PER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 55.0 bits (133), Expect = 8e-08
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGAD 1102
            ++ GA+V   D    T    A A    +IV +  +   +
Sbjct: 333  IQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 43.8 bits (104), Expect = 3e-04
 Identities = 12/113 (10%), Positives = 21/113 (18%), Gaps = 40/113 (35%)

Query: 13  SGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDV 72
                H       H L  A   G+    R         N   +++  P  +    G   +
Sbjct: 26  KNRKNHQSITSSQHSLLEASYDGYIKRQR---------NELQHYSLYPNPQGYGNGNDFL 76

Query: 73  CIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                  + +                           +   P     E    L
Sbjct: 77  ------GDFN-------------------------HTNLQIPTEPEPESPIKL 98

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  150 bits (383), Expect = 2e-42
 Identities = 56/187 (29%), Positives = 79/187 (42%), Gaps = 53/187 (28%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           D      L  AA   +   V  L+A+GA        TD  G +PLH AAQ G    + +L
Sbjct: 1   DLG--KKLLEAARAGQDDEVRILMANGAPF-----TTDWLGTSPLHLAAQYGHFSTTEVL 53

Query: 492 PLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNA 551
            L                 G               +AR    R  TPLH AA        
Sbjct: 54  -LR---------------AGVS------------RDARTKVDR--TPLHMAA-------- 75

Query: 552 CSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGK 604
            S GH  + E+L+KHGA+VN  D+ K T LH A         + L+++GAD++ ++   K
Sbjct: 76  -SEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCK 134

Query: 605 TALDLAV 611
           TA D+++
Sbjct: 135 TAFDISI 141

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  125 bits (318), Expect = 1e-33
 Identities = 52/191 (27%), Positives = 74/191 (38%), Gaps = 49/191 (25%)

Query: 398 DLESQLLEASKGGDMTVVTRLLSSCPHIVN-CRDLDGRHSTPLHFAAGYNRVAVVEYLLA 456
           DL  +LLEA++ G    V  L++   +      D  G   +PLH AA Y   +  E LL 
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMA---NGAPFTTDWLGT--SPLHLAAQYGHFSTTEVLLR 55

Query: 457 HGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTK 516
            G       +A  K   TPLH AA +G   +  +L L                 G D   
Sbjct: 56  AGVSR----DARTKVDRTPLHMAASEGHANIVEVL-LK---------------HGAD--- 92

Query: 517 VKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLW 576
                    VNA+D      T LH+A           + H EV E+L+K+GA+V+    +
Sbjct: 93  ---------VNAKDMLKM--TALHWAT---------EHNHQEVVELLIKYGADVHTQSKF 132

Query: 577 KFTPLHEAAAK 587
             T    +   
Sbjct: 133 CKTAFDISIDN 143

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 95.9 bits (240), Expect = 4e-23
 Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 31/127 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           YG     E LL +G S  AR      PLH A S GHA++V +LL+  A+ N +D    T 
Sbjct: 44  YGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTA 103

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH A      +V       E                           + +GAD   +++ 
Sbjct: 104 LHWATEHNHQEV------VE-------------------------LLIKYGADVHTQSKF 132

Query: 121 GQTPLDL 127
            +T  D+
Sbjct: 133 CKTAFDI 139

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 91.7 bits (229), Expect = 1e-21
 Identities = 40/189 (21%), Positives = 59/189 (31%), Gaps = 70/189 (37%)

Query: 375 GYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGR 434
           G + L +A +          S  ++   LL    G                 + R    R
Sbjct: 34  GTSPLHLAAQYGHF------STTEV---LL--RAGVS--------------RDARTKVDR 68

Query: 435 HSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLS 494
             TPLH AA      +VE LL HGADV    NA D    T LH A +    ++  LL + 
Sbjct: 69  --TPLHMAASEGHANIVEVLLKHGADV----NAKDMLKMTALHWATEHNHQEVVELL-IK 121

Query: 495 PSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSY 554
                           G D            V+ +    +  T    +            
Sbjct: 122 ---------------YGAD------------VHTQSKFCK--TAFDISI---------DN 143

Query: 555 GHYEVTEML 563
           G+ ++ E+L
Sbjct: 144 GNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 90.9 bits (227), Expect = 2e-21
 Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 675 CLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHL 734
            LLEA R G    V+  L ++   F   + G +PLH A         +  E L+R G   
Sbjct: 5   KLLEAARAGQDDEVR-ILMANGAPFTTDWLGTSPLHLAAQY---GHFSTTEVLLRAGVSR 60

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
           + + K    P+H+AA  GH ++++ LL+ GA VN  D+L  TALH     +  + V +L+
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 795 SHNAD 799
            + AD
Sbjct: 121 KYGAD 125

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 86.7 bits (216), Expect = 6e-20
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            + +GA     D    +PLH AA  G      +LL+ G     + +   TPL +   EG  
Sbjct: 22   MANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            ++ ++L               +AL  A +  +   V+ L+    +++ +    +  T   
Sbjct: 81   NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCK--TAFD 138

Query: 1170 LAA 1172
            ++ 
Sbjct: 139  ISI 141

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 86.3 bits (215), Expect = 1e-19
 Identities = 22/72 (30%), Positives = 37/72 (51%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  ++VE LL  GA ++A+D   +  LH A    H +VV LL++  A+ +T+  +  T 
Sbjct: 77  EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTA 136

Query: 61  LHEAAAKGKTDV 72
              +   G  D+
Sbjct: 137 FDISIDNGNEDL 148

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 83.6 bits (208), Expect = 8e-19
 Identities = 30/74 (40%), Positives = 42/74 (56%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
              PLH A S GH  + E+L+K GA+VNA D+ + T LH A   +  EV  LL+  GAD 
Sbjct: 67  DRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADV 126

Query: 274 TLHNCHSKSAIDVA 287
              +   K+A D++
Sbjct: 127 HTQSKFCKTAFDIS 140

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 81.7 bits (203), Expect = 4e-18
 Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +KHGA+VN  D+ K T LH A      ++V LL+++GAD   +++   T  D+ +  G++
Sbjct: 87   LKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE 146

Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 147  DLAEILQ 153

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 80.5 bits (200), Expect = 8e-18
 Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 4/95 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
               L  A  +    +   V  L+  GA     +    +P+HLAA  GH    + LLR G
Sbjct: 2   LGKKLLEAARA---GQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAG 57

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
              +    + +T LH  A +     V VLL H AD
Sbjct: 58  VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGAD 92

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 78.2 bits (194), Expect = 7e-17
 Identities = 26/57 (45%), Positives = 34/57 (59%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           PLH A  YGHF  TE+L++AG + +A      TPLH AAS+    +  +LL  GAD 
Sbjct: 37  PLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADV 93

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 77.0 bits (191), Expect = 1e-16
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
             TPLH A +        IVE L++ GA +N K+   +  +H A +  H +V++ L++ G
Sbjct: 67  DRTPLHMAASE---GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVL 793
           A V+      +TA   +  +       +L
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 72.0 bits (178), Expect = 8e-15
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 17/108 (15%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL--------- 1128
              L EAA  G+ D VR+L+ +GA  +     G +PL L  + G    +++L         
Sbjct: 4    KKLLEAARAGQDDEVRILMANGAPFTTDW-LGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 1129 ---RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                  + L  AA +G+   V+ LL    ++N +D      T LH A 
Sbjct: 63   RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKM--TALHWAT 108

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 70.5 bits (174), Expect = 3e-14
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 1/56 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            L  A   G  +   +L+  GA     D    +PLH AA         +LL  G  
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 63.9 bits (157), Expect = 5e-12
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLL 266
            LH A  + H EV E+LIK GA+V+    +  T    +      ++  +L
Sbjct: 103 ALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 56.6 bits (138), Expect = 2e-09
 Identities = 22/99 (22%), Positives = 28/99 (28%), Gaps = 32/99 (32%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSN 86
            L  A   G  D VR+L+   A   T D    +PLH AA  G           E      
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPFTT-DWLGTSPLHLAAQYGHFST------TE------ 51

Query: 87  QYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                                L  G     + +  +TPL
Sbjct: 52  -------------------VLLRAGVSRDARTKVDRTPL 71

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 53.9 bits (131), Expect = 2e-08
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLL 43
           +  ++VVE L+  GA +H +          +   G+ D+  +L
Sbjct: 110 HNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  153 bits (389), Expect = 5e-42
 Identities = 50/217 (23%), Positives = 80/217 (36%), Gaps = 52/217 (23%)

Query: 406 ASKGGDMTVVTRLLSSCPH---IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           A   G++  V RL++        ++  +   +  TPLH A      +VV  L+  GA   
Sbjct: 16  AVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ--TPLHLAVITTLPSVVRLLVTAGASP- 72

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
               A D+ G T  H A +         L L  +A                         
Sbjct: 73  ---MALDRHGQTAAHLACEHRSPTCLRAL-LDSAAPGTL--------------------- 107

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADL-WKFTPL 581
              + AR+  G   T LH A          +    E  ++L++ GA+++  D+    +PL
Sbjct: 108 --DLEARNYDGL--TALHVAV---------NTECQETVQLLLERGADIDAVDIKSGRSPL 154

Query: 582 HEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
             A         + LLQHGA++N +   G +AL  A 
Sbjct: 155 IHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 191

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  151 bits (385), Expect = 2e-41
 Identities = 55/256 (21%), Positives = 86/256 (33%), Gaps = 61/256 (23%)

Query: 375 GYTALQVA-GENSK---KLLQEPPSV--VDLESQ-------LLEASKGGDMTVVTRLLSS 421
           G T L +A  + +      L         +L+         L  A      +VV  L+++
Sbjct: 9   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 68

Query: 422 CPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQ 481
                   D  G+  T  H A  +     +  LL   A       A +  G T LH A  
Sbjct: 69  GASP-MALDRHGQ--TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 125

Query: 482 KGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHF 541
               +   LL L                +G D            ++A D    + +PL  
Sbjct: 126 TECQETVQLL-LE---------------RGAD------------IDAVDIKSGR-SPLIH 156

Query: 542 AAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGA 594
           A                + ++L++HGANVN       + LH A+        + L++ GA
Sbjct: 157 AV---------ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA 207

Query: 595 DINLKNTDGKTALDLA 610
           D +LKN    T L +A
Sbjct: 208 DSSLKNCHNDTPLMVA 223

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  131 bits (333), Expect = 2e-34
 Identities = 44/202 (21%), Positives = 66/202 (32%), Gaps = 54/202 (26%)

Query: 403 LLEASKGGDMTVVTRLLS---SCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGA 459
              A +    T +  LL         +  R+ DG   T LH A        V+ LL  GA
Sbjct: 83  AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGL--TALHVAVNTECQETVQLLLERGA 140

Query: 460 DVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKK 519
           D+ + D    K G +PL  A +     +  LL L                 G +      
Sbjct: 141 DIDAVDI---KSGRSPLIHAVENNSLSMVQLL-LQ---------------HGAN------ 175

Query: 520 LVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFT 579
                 VNA+  +G   + LH A+           G   +   LV+ GA+ ++ +    T
Sbjct: 176 ------VNAQMYSGS--SALHSAS---------GRGLLPLVRTLVRSGADSSLKNCHNDT 218

Query: 580 PLHEAA-------AKALLQHGA 594
           PL  A         +      A
Sbjct: 219 PLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  103 bits (260), Expect = 8e-25
 Identities = 37/157 (23%), Positives = 52/157 (33%), Gaps = 46/157 (29%)

Query: 466 NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQT 525
              D+ G TPLH A  +G       L ++                G +            
Sbjct: 3   TRADEDGDTPLHIAVVQGNLPAVHRL-VNLFQQG-----------GRE------------ 38

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
           ++  +   +  TPLH A                V  +LV  GA+    D    T  H A 
Sbjct: 39  LDIYNNLRQ--TPLHLAV---------ITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC 87

Query: 586 -------AKALLQHGA----DINLKNTDGKTALDLAV 611
                   +ALL   A    D+  +N DG TAL +AV
Sbjct: 88  EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 124

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 92.9 bits (232), Expect = 4e-21
 Identities = 33/133 (24%), Positives = 47/133 (35%), Gaps = 20/133 (15%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
             + G  +++ +  + TPLH A       +VRLL+  GA P   +R G T   L       
Sbjct: 33   QQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSP 92

Query: 1123 DVSDLL----------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNS 1165
                 L                 G +AL  A        VQ LL    +I+  D +    
Sbjct: 93   TCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGR- 151

Query: 1166 TPLHLAAGEKRHL 1178
            +PL  A  E   L
Sbjct: 152  SPLIHAV-ENNSL 163

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 91.7 bits (229), Expect = 9e-21
 Identities = 40/250 (16%), Positives = 72/250 (28%), Gaps = 59/250 (23%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
              PLH A       V  +L+ AGA+  A+D    T  H A           LL   A P
Sbjct: 46  RQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAA-P 104

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPY 332
              +  +++   +                  L  A        V+  L     ++     
Sbjct: 105 GTLDLEARNYDGLTA----------------LHVAVNTECQETVQLLLERGADIDAVDIK 148

Query: 333 TGDTPLPGTLLIDLLSDDKEFITVAE---EMQATVREHRDNGQSGGYTALQVAGENSKKL 389
           +G +PL       + + +   +++ +   +  A V     +G     +AL  A       
Sbjct: 149 SGRSPL-------IHAVENNSLSMVQLLLQHGANVNAQMYSG----SSALHSASGRGLL- 196

Query: 390 LQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVA 449
                 +V     L+    G D               + ++      TPL  A     + 
Sbjct: 197 -----PLVRT---LV--RSGAD--------------SSLKNCHND--TPLMVARSRRVID 230

Query: 450 VVEYLLAHGA 459
           ++       A
Sbjct: 231 ILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 90.2 bits (225), Expect = 3e-20
 Identities = 33/129 (25%), Positives = 46/129 (35%), Gaps = 34/129 (26%)

Query: 1   YGRKDVVEYLLASGASIHARD-DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
              ++ V+ LL  GA I A D   G  PL +A       +V+LLL+  AN N +     +
Sbjct: 126 TECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSS 185

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKN 118
            LH A+ +G   +                                   L   GAD  LKN
Sbjct: 186 ALHSASGRGLLPL------VR--------------------------TLVRSGADSSLKN 213

Query: 119 QEGQTPLDL 127
               TPL +
Sbjct: 214 CHNDTPLMV 222

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 90.2 bits (225), Expect = 3e-20
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 3/102 (2%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
           ++     +G +PL  AV        ++V+ L++ GA++N +     + +H A+  G L +
Sbjct: 142 IDAVDIKSGRSPLIHAV---ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPL 198

Query: 757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           + TL+R GA  +L +    T L           +R   +  A
Sbjct: 199 VRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 89.4 bits (223), Expect = 6e-20
 Identities = 21/72 (29%), Positives = 38/72 (52%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
                +V+ LL  GA+++A+   G   LH+A   G   +VR L+ + A+ + ++  N TP
Sbjct: 160 NNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTP 219

Query: 61  LHEAAAKGKTDV 72
           L  A ++   D+
Sbjct: 220 LMVARSRRVIDI 231

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 86.4 bits (215), Expect = 7e-19
 Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 22/97 (22%)

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLV----KHGANVNVADLWKFTPL 581
               D  G   TPLH A            G+      LV    + G  +++ +  + TPL
Sbjct: 2   ATRADEDGD--TPLHIAV---------VQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPL 50

Query: 582 HEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           H A         + L+  GA     +  G+TA  LA 
Sbjct: 51  HLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC 87

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 85.6 bits (213), Expect = 1e-18
 Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLI----RKGAHLNEKNKELLAPIHLAADLGHLDVLDTL 760
           GDTPLH AV          V  L+    + G  L+  N     P+HLA       V+  L
Sbjct: 9   GDTPLHIAVVQ---GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65

Query: 761 LRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSI 802
           +  GA    +D  GQTA H          +R LL   A  ++
Sbjct: 66  VTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTL 107

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 84.0 bits (209), Expect = 5e-18
 Identities = 20/76 (26%), Positives = 26/76 (34%), Gaps = 4/76 (5%)

Query: 1  YGRKDVVEYLL----ASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNW 56
           G    V  L+      G  +   ++    PLH A       VVRLL+ A A+P   D  
Sbjct: 19 QGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRH 78

Query: 57 NFTPLHEAAAKGKTDV 72
            T  H A        
Sbjct: 79 GQTAAHLACEHRSPTC 94

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 83.7 bits (208), Expect = 6e-18
 Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 22/134 (16%)

Query: 1064 VKHGA----NVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNR-DGATPLDL-V 1117
            +   A    ++   +    T LH A      + V+LLL+ GAD    +   G +PL   V
Sbjct: 99   LDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAV 158

Query: 1118 REGDQDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRN 1164
                  +  LL             G+SAL  A+ +G L  V+ L+ +  + + ++     
Sbjct: 159  ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHND- 217

Query: 1165 STPLHLAAGEKRHL 1178
             TPL +A   +R +
Sbjct: 218  -TPLMVAR-SRRVI 229

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 82.9 bits (206), Expect = 1e-17
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN-KELLAPIHLAADLGHLDVLDTLLRL 763
           G T LH AV +   + +  V+ L+ +GA ++  + K   +P+  A +   L ++  LL+ 
Sbjct: 116 GLTALHVAVNT---ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH 172

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           GA VN     G +ALH  +       VR L+   AD
Sbjct: 173 GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD 208

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 82.5 bits (205), Expect = 2e-17
 Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 8/100 (8%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAH----LNEKNKELLAPIHLAADLGHLDVLDTL 760
           G T  H A      +    + +L+   A     L  +N + L  +H+A +    + +  L
Sbjct: 79  GQTAAHLACEH---RSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLL 135

Query: 761 LRLGAKVNLVDV-LGQTALHRTARDDKTQAVRVLLSHNAD 799
           L  GA ++ VD+  G++ L     ++    V++LL H A+
Sbjct: 136 LERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN 175

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 82.5 bits (205), Expect = 2e-17
 Identities = 30/141 (21%), Positives = 45/141 (31%), Gaps = 25/141 (17%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADA----NPNTRDNW 56
                VV  L+ +GAS  A D  G    H AC       +R LL++ A    +   R+  
Sbjct: 56  TTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYD 115

Query: 57  NFTPLHEAAAKGKTDVCIGIYFAEH----SSKSNQYVYGIGGGTGCPMH-------KDRS 105
             T LH A      +        E      +   +      G +  P+            
Sbjct: 116 GLTALHVAVNTECQETV--QLLLERGADIDAVDIKS-----GRS--PLIHAVENNSLSMV 166

Query: 106 CYL-AHGADPFLKNQEGQTPL 125
             L  HGA+   +   G + L
Sbjct: 167 QLLLQHGANVNAQMYSGSSAL 187

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 76.3 bits (189), Expect = 2e-15
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++HGANVN       + LH A+ +G   +VR L++ GAD S KN    TPL +       
Sbjct: 170  LQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVI 229

Query: 1123 DVSDLL 1128
            D+    
Sbjct: 230  DILRGK 235

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 72.5 bits (179), Expect = 4e-14
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 214 GLVPLHNACSYGHFEVTEMLI----KAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSE 269
           G  PLH A   G+      L+    + G  ++  +  + TPLH A   +   V  LL++ 
Sbjct: 9   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 68

Query: 270 GADPTLHNCHSKSAIDVA 287
           GA P   + H ++A  +A
Sbjct: 69  GASPMALDRHGQTAAHLA 86

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 63.2 bits (155), Expect = 6e-11
 Identities = 23/112 (20%), Positives = 30/112 (26%), Gaps = 37/112 (33%)

Query: 19  ARDDGGLHPLHNACSFGHADVVRLLLE----ADANPNTRDNWNFTPLHEAAAKGKTDVCI 74
             D+ G  PLH A   G+   V  L+          +  +N   TPLH A       V  
Sbjct: 4   RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV-- 61

Query: 75  GIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                                            L   GA P   ++ GQT  
Sbjct: 62  ----VR--------------------------LLVTAGASPMALDRHGQTAA 83

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 62.5 bits (153), Expect = 9e-11
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 4/70 (5%)

Query: 734 LNEKNKELLAPIHLAADLGHLDV----LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQA 789
               +++   P+H+A   G+L      ++   + G ++++ + L QT LH          
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 61

Query: 790 VRVLLSHNAD 799
           VR+L++  A 
Sbjct: 62  VRLLVTAGAS 71

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 60.9 bits (149), Expect = 3e-10
 Identities = 13/49 (26%), Positives = 20/49 (40%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN 49
            G   +V  L+ SGA    ++     PL  A S    D++R      A+
Sbjct: 193 RGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 54.8 bits (133), Expect = 4e-08
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGA 1101
            V+ GA+ ++ +    TPL  A ++   DI+R      A
Sbjct: 203  VRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  151 bits (384), Expect = 6e-42
 Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 58/222 (26%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  A++     V   L  +   + +  D +G   TPL+ A   N + + + L+  GAD+ 
Sbjct: 10  LEAANQRDTKKVKEILQDTTYQV-DEVDTEGN--TPLNIAVHNNDIEIAKALIDRGADI- 65

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              N  +    +P   A  +GRT++ A + L  +  +                       
Sbjct: 66  ---NLQNSISDSPYLYAGAQGRTEILAYM-LKHATPD----------------------- 98

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHG-ANVNVADLWKFTPL 581
              +N  +  G     L  AA           GH +  ++L++ G  +++  + + +T L
Sbjct: 99  ---LNKHNRYGG--NALIPAA---------EKGHIDNVKLLLEDGREDIDFQNDFGYTAL 144

Query: 582 HEAA------------AKALLQHGADINLKNTDGKTALDLAV 611
            EA              K L+++GAD ++K+  G+TA+D A 
Sbjct: 145 IEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYAN 186

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  132 bits (335), Expect = 3e-35
 Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 58/213 (27%)

Query: 429 RDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLS 488
           +  +      L  A   +   V E L      V    +  D  G TPL+ A      +++
Sbjct: 2   KTYEVG--ALLEAANQRDTKKVKEILQDTTYQV----DEVDTEGNTPLNIAVHNNDIEIA 55

Query: 489 ALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPL 548
             L +                +G D            +N +++     +P  +A      
Sbjct: 56  KAL-ID---------------RGAD------------INLQNSISD--SPYLYAG----- 80

Query: 549 HNACSYGHYEVTEMLVKHGA-NVNVADLWKFTPLHEAA-------AKALLQHG-ADINLK 599
               + G  E+   ++KH   ++N  + +    L  AA        K LL+ G  DI+ +
Sbjct: 81  ----AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQ 136

Query: 600 NTDGKTALDLAVPCTRAVLSGDHKK--EELLEA 630
           N  G TAL  AV       +  ++   + L+E 
Sbjct: 137 NDFGYTALIEAVGLREG--NQLYQDIVKLLMEN 167

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  121 bits (307), Expect = 1e-31
 Identities = 42/240 (17%), Positives = 86/240 (35%), Gaps = 65/240 (27%)

Query: 374 GGYTALQVAGENS----KKLLQEPPSVVDLESQ-------LLEASKGGDMTVVTRLLSSC 422
                L+ A +      K++LQ+  +   ++         L  A    D+ +   L+   
Sbjct: 5   EVGALLEAANQRDTKKVKEILQD--TTYQVDEVDTEGNTPLNIAVHNNDIEIAKALID-- 60

Query: 423 PH--IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGA-DVHSKDNATDKWGFTPLHEA 479
                +N ++      +P  +A    R  ++ Y+L H   D+    N  +++G   L  A
Sbjct: 61  -RGADINLQNSISD--SPYLYAGAQGRTEILAYMLKHATPDL----NKHNRYGGNALIPA 113

Query: 480 AQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPL 539
           A+KG      LL L     +                          ++ ++  G   T L
Sbjct: 114 AEKGHIDNVKLL-LEDGRED--------------------------IDFQNDFGY--TAL 144

Query: 540 HFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQH 592
             A GL   +      + ++ ++L+++GA+ ++ D    T +  A        +K L Q+
Sbjct: 145 IEAVGLREGNQ----LYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  116 bits (292), Expect = 2e-29
 Identities = 48/228 (21%), Positives = 81/228 (35%), Gaps = 51/228 (22%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLK 599
            L  A      +V E+L      V+  D    TPL+ A        AKAL+  GADINL+
Sbjct: 9   LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQ 68

Query: 600 NTDGKTALDLAVPCTRAVLSGDHKK--EELLEAARMMGGGLHRYTWPLGTTDIGWCSCCC 657
           N+   +    A        +    +    +L+                 T D+       
Sbjct: 69  NSISDSPYLYAG-------AQGRTEILAYMLKH---------------ATPDL------- 99

Query: 658 KMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV--VNFKHPYTGDTPLHCAVTS 715
                      + + G+ L+ A  +G    VK  L      ++F++ + G T L  AV  
Sbjct: 100 --------NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF-GYTALIEAVGL 150

Query: 716 PYPKR--KAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLL 761
               +  + IV+ L+  GA  + K+      +  A   G+ ++   L 
Sbjct: 151 REGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 94.8 bits (237), Expect = 3e-22
 Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 22/135 (16%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
                  V+  D    TPL+ A      +I + L+  GAD + +N    +P      +G  
Sbjct: 26   QDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRT 85

Query: 1123 DVSDLL-------------RGNSALLDAAKKGNLGRVQKLLTAD--NINCRDAQGRNSTP 1167
            ++   +              G +AL+ AA+KG++  V+ LL     +I+ ++  G   T 
Sbjct: 86   EILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGY--TA 143

Query: 1168 LHLAA----GEKRHL 1178
            L  A     G + + 
Sbjct: 144  LIEAVGLREGNQLYQ 158

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 91.0 bits (227), Expect = 9e-21
 Identities = 51/256 (19%), Positives = 83/256 (32%), Gaps = 79/256 (30%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
            L  A      +V E+L      V+ +D    TPL+ A   + +E+   L+  GAD  L 
Sbjct: 9   LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQ 68

Query: 277 NCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTS---DVVNFKHPYT 333
           N  S S                       L A  QG    +  ++       +N  + Y 
Sbjct: 69  NSISDSP---------------------YLYAGAQGRTEIL-AYMLKHATPDLNKHNRY- 105

Query: 334 GDTPL-----PG-----TLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVA- 382
           G   L      G      LL++   +D               + +++    GYTAL  A 
Sbjct: 106 GGNALIPAAEKGHIDNVKLLLEDGREDI--------------DFQND---FGYTALIEAV 148

Query: 383 -GENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHF 441
                 +L Q+   +V L   L+    G D               + +D  GR  T + +
Sbjct: 149 GLREGNQLYQD---IVKL---LM--ENGAD--------------QSIKDNSGR--TAMDY 184

Query: 442 AAGYNRVAVVEYLLAH 457
           A       + + L  +
Sbjct: 185 ANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 89.4 bits (223), Expect = 3e-20
 Identities = 17/72 (23%), Positives = 35/72 (48%)

Query: 1  YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
             K V E L  +   +   D  G  PL+ A      ++ + L++  A+ N +++ + +P
Sbjct: 16 RDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSP 75

Query: 61 LHEAAAKGKTDV 72
             A A+G+T++
Sbjct: 76 YLYAGAQGRTEI 87

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 89.0 bits (222), Expect = 4e-20
 Identities = 26/137 (18%), Positives = 57/137 (41%), Gaps = 15/137 (10%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADA-NPNTRDNWNFT 59
               ++ + L+  GA I+ ++     P   A + G  +++  +L+    + N  + +   
Sbjct: 49  NNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGN 108

Query: 60  PLHEAAAKGKTDVC---IGIYFAEHSSKSNQYVYG-------IGGGTGCPMHKDRSCYL- 108
            L  AA KG  D     +     +   +++   +G       +G   G  +++D    L 
Sbjct: 109 ALIPAAEKGHIDNVKLLLEDGREDIDFQND---FGYTALIEAVGLREGNQLYQDIVKLLM 165

Query: 109 AHGADPFLKNQEGQTPL 125
            +GAD  +K+  G+T +
Sbjct: 166 ENGADQSIKDNSGRTAM 182

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 81.3 bits (202), Expect = 2e-17
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 11/138 (7%)

Query: 667 IKDEFKGHCLLEACRQGDPSRVKKFLTS---DVVNFKHPYTGDTPLHCAVTSPYPKRKAI 723
           +K   +   LLEA  Q D  +VK+ L      V +      G+TPL+ AV   +     I
Sbjct: 1   MKTY-EVGALLEAANQRDTKKVKEILQDTTYQV-DEVDTE-GNTPLNIAV---HNNDIEI 54

Query: 724 VESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAK-VNLVDVLGQTALHRTA 782
            ++LI +GA +N +N    +P   A   G  ++L  +L+     +N  +  G  AL   A
Sbjct: 55  AKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAA 114

Query: 783 RDDKTQAVRVLLSH-NAD 799
                  V++LL     D
Sbjct: 115 EKGHIDNVKLLLEDGRED 132

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 79.0 bits (196), Expect = 1e-16
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 1   YGRKDVVEYLLASG-ASIHARDDGGLHPLHNACSF-----GHADVVRLLLEADANPNTRD 54
            G  D V+ LL  G   I  ++D G   L  A         + D+V+LL+E  A+ + +D
Sbjct: 116 KGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKD 175

Query: 55  NWNFTPLHEAAAKGKTDV 72
           N   T +  A  KG T++
Sbjct: 176 NSGRTAMDYANQKGYTEI 193

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 75.6 bits (187), Expect = 1e-15
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 10/102 (9%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAH-LNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
            D+P   A       R  I+  +++     LN+ N+     +  AA+ GH+D +  LL  
Sbjct: 72  SDSPYLYAGAQ---GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLED 128

Query: 764 G-AKVNLVDVLGQTALHRTARDDKTQA-----VRVLLSHNAD 799
           G   ++  +  G TAL       +        V++L+ + AD
Sbjct: 129 GREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD 170

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 72.9 bits (180), Expect = 1e-14
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 9/99 (9%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKG-AHLNEKNKELLAPIHLAADL-----GHLDVLD 758
           G   L  A           V+ L+  G   ++ +N      +  A  L      + D++ 
Sbjct: 106 GGNALIPAAEK---GHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK 162

Query: 759 TLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN 797
            L+  GA  ++ D  G+TA+    +   T+  ++L  +N
Sbjct: 163 LLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 72.9 bits (180), Expect = 1e-14
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 20/112 (17%)

Query: 1064 VKHGA-NVNVADLWKFTPLHEAAAKGKADIVRLLLQHG-ADPSKKNRDGATPLDLVREGD 1121
            +KH   ++N  + +    L  AA KG  D V+LLL+ G  D   +N  G T L       
Sbjct: 92   LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIE----- 146

Query: 1122 QDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                      +  L    +     V+ L+    + + +D  GR  T +  A 
Sbjct: 147  ----------AVGLREGNQLYQDIVKLLMENGADQSIKDNSGR--TAMDYAN 186

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 68.6 bits (169), Expect = 4e-13
 Identities = 17/107 (15%), Positives = 27/107 (25%), Gaps = 33/107 (30%)

Query: 20  RDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFA 79
           +       L  A       V  +L +     +  D    TPL+ A      ++      A
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEI------A 55

Query: 80  EHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
           +                           L   GAD  L+N    +P 
Sbjct: 56  K--------------------------ALIDRGADINLQNSISDSPY 76

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 61.7 bits (151), Expect = 1e-10
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 26/93 (27%)

Query: 1064 VKHG-ANVNVADLWKFTPLHEAAA-----KGKADIVRLLLQHGADPSKKNRDGATPLDLV 1117
            ++ G  +++  + + +T L EA       +   DIV+LL+++GAD S K+  G T +D  
Sbjct: 126  LEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDY- 184

Query: 1118 REGDQDVSDLLRGNSALLDAAKKGNLGRVQKLL 1150
                               A +KG     + L 
Sbjct: 185  -------------------ANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 56.3 bits (137), Expect = 6e-09
 Identities = 10/46 (21%), Positives = 25/46 (54%)

Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEAD 47
             +D+V+ L+ +GA    +D+ G   +  A   G+ ++ ++L + +
Sbjct: 156 LYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 49.4 bits (119), Expect = 1e-06
 Identities = 10/36 (27%), Positives = 21/36 (58%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH 1099
            +++GA+ ++ D    T +  A  KG  +I ++L Q+
Sbjct: 165  MENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  154 bits (392), Expect = 7e-42
 Identities = 56/234 (23%), Positives = 85/234 (36%), Gaps = 62/234 (26%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L EA  GG ++ V  LL     + N    D    TPL  A        V  LL HGA V 
Sbjct: 96  LHEACLGGHLSCVKILLKHGAQV-NGVTADWH--TPLFNACVSGSWDCVNLLLQHGASVQ 152

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
            + +       +P+HEAA++G  +    L ++                GG+         
Sbjct: 153 PESD-----LASPIHEAARRGHVECVNSL-IA---------------YGGN--------- 182

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              ++ + +     TPL+ A         C        + L++ GA+VN     + +PLH
Sbjct: 183 ---IDHKISHLG--TPLYLA---------CENQQRACVKKLLESGADVN-QGKGQDSPLH 227

Query: 583 EAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLE 629
                     A  L+  GAD   KN +GK  ++L  P            +  LE
Sbjct: 228 AVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP-------ESPLAQLFLE 274

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  152 bits (387), Expect = 3e-41
 Identities = 62/255 (24%), Positives = 83/255 (32%), Gaps = 59/255 (23%)

Query: 368 RDNGQSG--GYTALQVAGENSKKLLQEPPSV--VDLESQLLEASKGGDMTVVTRLLSSCP 423
            D  Q G  G            +LL  P     V   S + EA+  G    +  L+S   
Sbjct: 24  MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW 83

Query: 424 HIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG 483
             VN    D    +PLH A     ++ V+ LL HGA V    N       TPL  A   G
Sbjct: 84  A-VNIITADHV--SPLHEACLGGHLSCVKILLKHGAQV----NGVTADWHTPLFNACVSG 136

Query: 484 RTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAA 543
                 LL L                 G              V         ++P+H AA
Sbjct: 137 SWDCVNLL-LQ---------------HGAS------------VQPES---DLASPIHEAA 165

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADI 596
                      GH E    L+ +G N++       TPL+ A         K LL+ GAD+
Sbjct: 166 ---------RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV 216

Query: 597 NLKNTDGKTALDLAV 611
           N +     + L   V
Sbjct: 217 N-QGKGQDSPLHAVV 230

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  130 bits (329), Expect = 2e-33
 Identities = 46/181 (25%), Positives = 67/181 (37%), Gaps = 28/181 (15%)

Query: 442 AAGYNRVAVVEYLLAHGADVHSKD-NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAAND 500
            + ++       L+  G+ + S D       G  P       G   LS   PL   A +D
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSN--PLMGDAVSD 59

Query: 501 --PLRELFEACKGGDLTKVKKLVNPQT-VNARDTAGRKSTPLHFAAGLVPLHNACSYGHY 557
             P+    EA   G    ++ L++    VN         +PLH A         C  GH 
Sbjct: 60  WSPM---HEAAIHGHQLSLRNLISQGWAVNIITADHV--SPLHEA---------CLGGHL 105

Query: 558 EVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLA 610
              ++L+KHGA VN       TPL  A           LLQHGA +  ++ D  + +  A
Sbjct: 106 SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEA 164

Query: 611 V 611
            
Sbjct: 165 A 165

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  122 bits (310), Expect = 5e-31
 Identities = 66/380 (17%), Positives = 101/380 (26%), Gaps = 137/380 (36%)

Query: 208 GQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLL 267
            Q    G  P       G       L+      +A+  W  +P+HEAA          L+
Sbjct: 27  KQGGMDGSKPAGPRDFPGI-----RLLSNPLMGDAVSDW--SPMHEAAIHGHQLSLRNLI 79

Query: 268 SEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV-V 326
           S+G    +      S                      L EAC  G  S VK  L     V
Sbjct: 80  SQGWAVNIITADHVSP---------------------LHEACLGGHLSCVKILLKHGAQV 118

Query: 327 NFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRD------------NGQSG 374
           N        TPL                       A V    D              +S 
Sbjct: 119 NGVTAD-WHTPL---------------------FNACVSGSWDCVNLLLQHGASVQPESD 156

Query: 375 GYTALQVA-GENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDG 433
             + +  A      +        V+    L+  + GG+              ++ +    
Sbjct: 157 LASPIHEAARRGHVE-------CVNS---LI--AYGGN--------------IDHKISHL 190

Query: 434 RHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPL 493
              TPL+ A    + A V+ LL  GADV+       K   +PLH   +    +L+ LL +
Sbjct: 191 G--TPLYLACENQQRACVKKLLESGADVN-----QGKGQDSPLHAVVRTASEELACLL-M 242

Query: 494 SPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACS 553
                            G D              A++  G+   P+              
Sbjct: 243 D---------------FGAD------------TQAKNAEGK--RPVELVP---------P 264

Query: 554 YGHYEVTEMLVKHGANVNVA 573
                    L + GA++   
Sbjct: 265 ESP-LAQLFLEREGASLPKP 283

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  101 bits (255), Expect = 9e-24
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 16/128 (12%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +  G  VN+      +PLHEA   G    V++LL+HGA  +    D  TPL      G  
Sbjct: 79   ISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSW 138

Query: 1123 DVSDLL-----------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHL 1170
            D  +LL              S + +AA++G++  V  L+    NI+ + +     TPL+L
Sbjct: 139  DCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLG--TPLYL 196

Query: 1171 AAGEKRHL 1178
            A  E +  
Sbjct: 197  AC-ENQQR 203

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 99.1 bits (248), Expect = 8e-23
 Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 25/138 (18%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +G +  +  L++ G +++      + PLH AC  GH   V++LL+  A  N       TP
Sbjct: 69  HGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTP 128

Query: 61  LHEAAAKGKTDVC-----IGIYFAEHSSKSNQYVYGIGGGTGCPMH-------KDRSCYL 108
           L  A   G  D        G   A    +S+         +  P+H        +    L
Sbjct: 129 LFNACVSGSWDCVNLLLQHG---ASVQPESD-------LAS--PIHEAARRGHVECVNSL 176

Query: 109 -AHGADPFLKNQEGQTPL 125
            A+G +   K     TPL
Sbjct: 177 IAYGGNIDHKISHLGTPL 194

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 97.6 bits (244), Expect = 3e-22
 Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 16/139 (11%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  D V  LL  GAS+    D    P+H A   GH + V  L+    N + + +   TP
Sbjct: 135 SGSWDCVNLLLQHGASVQPESDLAS-PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTP 193

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH-------KDRSCYL-AHGA 112
           L+ A    +          E  +  NQ   G G  +  P+H       ++ +C L   GA
Sbjct: 194 LYLACENQQRACV--KKLLESGADVNQ---GKGQDS--PLHAVVRTASEELACLLMDFGA 246

Query: 113 DPFLKNQEGQTPLDLTVAE 131
           D   KN EG+ P++L   E
Sbjct: 247 DTQAKNAEGKRPVELVPPE 265

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 93.7 bits (234), Expect = 5e-21
 Identities = 40/250 (16%), Positives = 74/250 (29%), Gaps = 70/250 (28%)

Query: 551 ACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLA 610
             S+ H+  +  LV  G+++                        D      DG       
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMA---------------------SMDGKQGGMDGSKPAGPR 40

Query: 611 VPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDE 670
                            L +  +MG  +  ++ P+                         
Sbjct: 41  -----------DFPGIRLLSNPLMGDAVSDWS-PM------------------------- 63

Query: 671 FKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIR 729
              H    A   G    ++  ++    VN        +PLH A         + V+ L++
Sbjct: 64  ---HE---AAIHGHQLSLRNLISQGWAVNIITAD-HVSPLHEACLG---GHLSCVKILLK 113

Query: 730 KGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQA 789
            GA +N    +   P+  A   G  D ++ LL+ GA V        + +H  AR    + 
Sbjct: 114 HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVEC 172

Query: 790 VRVLLSHNAD 799
           V  L+++  +
Sbjct: 173 VNSLIAYGGN 182

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 88.3 bits (220), Expect = 3e-19
 Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 1/74 (1%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
             ++  V+ LL SGA ++        PLH        ++  LL++  A+   ++     P
Sbjct: 200 NQQRACVKKLLESGADVNQGKGQDS-PLHAVVRTASEELACLLMDFGADTQAKNAEGKRP 258

Query: 61  LHEAAAKGKTDVCI 74
           +     +       
Sbjct: 259 VELVPPESPLAQLF 272

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 87.2 bits (217), Expect = 1e-18
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
             TPL  A  S        V  L++ GA +  ++ +L +PIH AA  GH++ +++L+  G
Sbjct: 125 WHTPLFNACVS---GSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYG 180

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
             ++       T L+    + +   V+ LL   AD
Sbjct: 181 GNIDHKISHLGTPLYLACENQQRACVKKLLESGAD 215

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 86.8 bits (216), Expect = 1e-18
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 24/112 (21%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            + +G N++       TPL+ A    +   V+ LL+ GAD ++      +PL         
Sbjct: 177  IAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGK-GQDSPLHA------- 228

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGE 1174
                           +  +      L+    +   ++A+G+   P+ L   E
Sbjct: 229  -------------VVRTASEELACLLMDFGADTQAKNAEGK--RPVELVPPE 265

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 83.7 bits (208), Expect = 1e-17
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
             +P+H A           V SLI  G +++ K   L  P++LA +      +  LL  G
Sbjct: 157 LASPIHEAA---RRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG 213

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A VN       + LH   R    +   +L+   AD
Sbjct: 214 ADVN-QGKGQDSPLHAVVRTASEELACLLMDFGAD 247

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 81.0 bits (201), Expect = 1e-16
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 19/123 (15%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            + +    +      ++P+HEAA  G    +R L+  G   +    D  +PL      G  
Sbjct: 48   LSNPLMGDAVS--DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHL 105

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
                +L              ++ L +A   G+   V  LL    ++     +   ++P+H
Sbjct: 106  SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ---PESDLASPIH 162

Query: 1170 LAA 1172
             AA
Sbjct: 163  EAA 165

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 79.8 bits (198), Expect = 3e-16
 Identities = 24/157 (15%), Positives = 36/157 (22%), Gaps = 64/157 (40%)

Query: 1   YGRKDVVEYLLASGASIHARDDGG--------LH-----------------------PLH 29
           +        L+  G+ + + D                                    P+H
Sbjct: 5   HHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMH 64

Query: 30  NACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYV 89
            A   GH   +R L+      N     + +PLHEA   G           +         
Sbjct: 65  EAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSC------VK--------- 109

Query: 90  YGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                             L  HGA       +  TPL
Sbjct: 110 -----------------ILLKHGAQVNGVTADWHTPL 129

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 77.5 bits (192), Expect = 1e-15
 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
             TPL+ A  +   +++A V+ L+  GA +N + K   +P+H        ++   L+  G
Sbjct: 190 LGTPLYLACEN---QQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFG 245

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A     +  G+  +     +     +  L    A 
Sbjct: 246 ADTQAKNAEGKRPVELVPPESPLAQL-FLEREGAS 279

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 74.5 bits (184), Expect = 2e-14
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            ++ GA+VN     + +PLH        ++  LL+  GAD   KN +G  P++LV      
Sbjct: 210  LESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPL 268

Query: 1124 VSDLLRGNSALLDAAK 1139
                L    A L   K
Sbjct: 269  AQLFLEREGASLPKPK 284

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 62.5 bits (153), Expect = 2e-10
 Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 18/103 (17%)

Query: 1084 AAAKGKADIVRLLLQHGA-----DPSKKNRDGATPL--------DLVREGDQDVSDLLRG 1130
             ++         L+  G+     D  +   DG+ P          L+      + D +  
Sbjct: 2    GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNP--LMGDAVSD 59

Query: 1131 NSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
             S + +AA  G+   ++ L++    +N   A     +PLH A 
Sbjct: 60   WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHV--SPLHEAC 100

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 54.4 bits (132), Expect = 8e-08
 Identities = 8/51 (15%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPN 51
              +++   L+  GA   A++  G  P+           +  L    A+  
Sbjct: 232 TASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQL-FLEREGASLP 281

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 47.1 bits (113), Expect = 2e-05
 Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 16/103 (15%)

Query: 31  ACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVY 90
             S  H      L+   ++  + D      +  +   G  D   GI    +    +    
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDG-KQGGMDGSKPAGPRD-FPGIRLLSNPLMGD---- 55

Query: 91  GIGGGTGCPMH-------KDRSCYL-AHGADPFLKNQEGQTPL 125
            +   +  PMH       +     L + G    +   +  +PL
Sbjct: 56  AVSDWS--PMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPL 96

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 42.1 bits (100), Expect = 7e-04
 Identities = 9/84 (10%), Positives = 20/84 (23%), Gaps = 31/84 (36%)

Query: 747 LAADLGHLDVLDTLLRLGAKVNLVDVL-------------------------------GQ 775
           + +   H      L+  G+ +  +D                                   
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDW 60

Query: 776 TALHRTARDDKTQAVRVLLSHNAD 799
           + +H  A      ++R L+S    
Sbjct: 61  SPMHEAAIHGHQLSLRNLISQGWA 84

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  153 bits (388), Expect = 9e-42
 Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 54/214 (25%)

Query: 406 ASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGA-DVHSK 464
           A++        RLL +     N +D  GR  TPLH A   +   V + L+ + A D+   
Sbjct: 64  AARYSRSDAAKRLLEASADA-NIQDNMGR--TPLHAAVSADAQGVFQILIRNRATDL--- 117

Query: 465 DNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQ 524
            +A    G TPL  AA+     +   L ++                  D           
Sbjct: 118 -DARMHDGTTPLILAARLAVEGMLEDL-IN---------------SHAD----------- 149

Query: 525 TVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA 584
            VNA D  G+  + LH+AA         +  + +   +L+K+GAN ++ +  + TPL  A
Sbjct: 150 -VNAVDDLGK--SALHWAA---------AVNNVDAAVVLLKNGANKDMQNNREETPLFLA 197

Query: 585 A-------AKALLQHGADINLKNTDGKTALDLAV 611
           A       AK LL H A+ ++ +   +   D+A 
Sbjct: 198 AREGSYETAKVLLDHFANRDITDHMDRLPRDIAQ 231

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  137 bits (348), Expect = 2e-36
 Identities = 44/205 (21%), Positives = 66/205 (32%), Gaps = 52/205 (25%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  A       V   L+ +    ++ R  DG   TPL  AA      ++E L+   ADV 
Sbjct: 94  LHAAVSADAQGVFQILIRNRATDLDARMHDGT--TPLILAARLAVEGMLEDLINSHADV- 150

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              NA D  G + LH AA       + +L L                 G +         
Sbjct: 151 ---NAVDDLGKSALHWAAAVNNVDAAVVL-LK---------------NGAN--------- 182

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
               + ++      TPL  AA           G YE  ++L+ H AN ++ D     P  
Sbjct: 183 ---KDMQNNREE--TPLFLAA---------REGSYETAKVLLDHFANRDITDHMDRLPRD 228

Query: 583 EAA-------AKALLQHGADINLKN 600
            A         + L       +  +
Sbjct: 229 IAQERMHHDIVRLLDLEHHHHHHHH 253

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 99.5 bits (249), Expect = 3e-23
 Identities = 36/156 (23%), Positives = 53/156 (33%), Gaps = 37/156 (23%)

Query: 466 NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN--P 523
           N     GFTPL  A+  G                  L       +      +   +    
Sbjct: 4   NVRGPDGFTPLMIASCSG----------------GGLETGNSEEEEDAPAVISDFIYQGA 47

Query: 524 QTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHE 583
              N  D  G   T LH AA          Y   +  + L++  A+ N+ D    TPLH 
Sbjct: 48  SLHNQTDRTGE--TALHLAA---------RYSRSDAAKRLLEASADANIQDNMGRTPLHA 96

Query: 584 AA-------AKALLQHGA-DINLKNTDGKTALDLAV 611
           A         + L+++ A D++ +  DG T L LA 
Sbjct: 97  AVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 132

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 93.3 bits (233), Expect = 4e-21
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 31/127 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
              + ++E L+ S A ++A DD G   LH A +  + D   +LL+  AN + ++N   TP
Sbjct: 134 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP 193

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           L  AA +G  +       A+                           L H A+  + +  
Sbjct: 194 LFLAAREGSYET------AK-------------------------VLLDHFANRDITDHM 222

Query: 121 GQTPLDL 127
            + P D+
Sbjct: 223 DRLPRDI 229

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 93.3 bits (233), Expect = 4e-21
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 18/125 (14%)

Query: 1064 VKHGANV-NVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGD 1121
            +  GA++ N  D    T LH AA   ++D  + LL+  AD + ++  G TPL   V    
Sbjct: 43   IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA 102

Query: 1122 QDVSDLL-------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTP 1167
            Q V  +L              G + L+ AA+    G ++ L+ +  ++N  D  G+  + 
Sbjct: 103  QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK--SA 160

Query: 1168 LHLAA 1172
            LH AA
Sbjct: 161  LHWAA 165

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 91.8 bits (229), Expect = 1e-20
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPL  A        + ++E LI   A +N  +    + +H AA + ++D    LL+ G
Sbjct: 124 GTTPLILAA---RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 180

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A  ++ +   +T L   AR+   +  +VLL H A+
Sbjct: 181 ANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 215

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 89.4 bits (223), Expect = 8e-20
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 4/96 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAH-LNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
           G TPLH AV++     + + + LIR  A  L+ +  +   P+ LAA L    +L+ L+  
Sbjct: 90  GRTPLHAAVSA---DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS 146

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            A VN VD LG++ALH  A  +   A  VLL + A+
Sbjct: 147 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 182

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 87.9 bits (219), Expect = 3e-19
 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 24/116 (20%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +   A+VN  D    + LH AAA    D   +LL++GA+   +N    TPL L       
Sbjct: 144  INSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFL------- 196

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHL 1178
                         AA++G+    + LL    N +  D   R   P  +A  E+ H 
Sbjct: 197  -------------AAREGSYETAKVLLDHFANRDITDHMDR--LPRDIAQ-ERMHH 236

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 86.8 bits (216), Expect = 6e-19
 Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 34/127 (26%)

Query: 1   YGRKDVVEYLLASGAS-IHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
              + V + L+ + A+ + AR   G  PL  A       ++  L+ + A+ N  D+   +
Sbjct: 100 ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKS 159

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKN 118
            LH AAA    D       A                            L  +GA+  ++N
Sbjct: 160 ALHWAAAVNNVDA------AV--------------------------VLLKNGANKDMQN 187

Query: 119 QEGQTPL 125
              +TPL
Sbjct: 188 NREETPL 194

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 85.6 bits (213), Expect = 2e-18
 Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 24/139 (17%)

Query: 1   YGRKDVVEYLLASGASIH-ARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
                V+   +  GAS+H   D  G   LH A  +  +D  + LLEA A+ N +DN   T
Sbjct: 33  EDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 92

Query: 60  PLHEAAAKGKTDVCIGIYFAEH-----SSKSNQYVYGIGGGTGCPMH-------KDRSCY 107
           PLH A +     V        +      ++ +       G T  P+        +     
Sbjct: 93  PLHAAVSADAQGVF--QILIRNRATDLDARMHD------GTT--PLILAARLAVEGMLED 142

Query: 108 L-AHGADPFLKNQEGQTPL 125
           L    AD    +  G++ L
Sbjct: 143 LINSHADVNAVDDLGKSAL 161

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 85.2 bits (212), Expect = 2e-18
 Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G + LH A              L++ GA+ + +N     P+ LAA  G  +    LL   
Sbjct: 157 GKSALHWAAAV---NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 213

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A  ++ D + +              VR+L   +  
Sbjct: 214 ANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHH 248

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 84.8 bits (211), Expect = 3e-18
 Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 5/106 (4%)

Query: 695 DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHL 754
            + N     TG+T LH A       R    + L+   A  N ++     P+H A      
Sbjct: 48  SLHNQTD-RTGETALHLAARY---SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQ 103

Query: 755 DVLDTLLRLGAK-VNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            V   L+R  A  ++     G T L   AR      +  L++ +AD
Sbjct: 104 GVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD 149

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 84.1 bits (209), Expect = 5e-18
 Identities = 17/72 (23%), Positives = 31/72 (43%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
               D    LL +GA+   +++    PL  A   G  +  ++LL+  AN +  D+ +  P
Sbjct: 167 VNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP 226

Query: 61  LHEAAAKGKTDV 72
              A  +   D+
Sbjct: 227 RDIAQERMHHDI 238

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 82.9 bits (206), Expect = 1e-17
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 12/113 (10%)

Query: 697 VNFKHPYTGDTPLHCAV----------TSPYPKRKAIVESLIRKGAHL-NEKNKELLAPI 745
           VN + P  G TPL  A           +       A++   I +GA L N+ ++     +
Sbjct: 3   VNVRGPD-GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 61

Query: 746 HLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           HLAA     D    LL   A  N+ D +G+T LH     D     ++L+ + A
Sbjct: 62  HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 79.0 bits (196), Expect = 3e-16
 Identities = 34/133 (25%), Positives = 47/133 (35%), Gaps = 31/133 (23%)

Query: 1069 NVNVADLWKFTPLHEAAAKGKA-------------DIVRLLLQHGADPS-KKNRDGATPL 1114
            +VNV     FTPL  A+  G                ++   +  GA    + +R G T L
Sbjct: 2    DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 61

Query: 1115 DL-VREGDQDVSDLL------------RGNSALLDAAKKGNLGRVQKLLT--ADNINCRD 1159
             L  R    D +  L             G + L  A      G  Q L+   A +++ R 
Sbjct: 62   HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 121

Query: 1160 AQGRNSTPLHLAA 1172
              G   TPL LAA
Sbjct: 122  HDGT--TPLILAA 132

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 77.5 bits (192), Expect = 9e-16
 Identities = 20/74 (27%), Positives = 35/74 (47%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G   LH A +  + +   +L+K GAN +  +  + TPL  AA +   E   +LL   A+ 
Sbjct: 157 GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 216

Query: 274 TLHNCHSKSAIDVA 287
            + +   +   D+A
Sbjct: 217 DITDHMDRLPRDIA 230

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 74.8 bits (185), Expect = 7e-15
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K+GAN ++ +  + TPL  AA +G  +  ++LL H A+    +     P D+       
Sbjct: 177  LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHH 236

Query: 1123 DVSDLL 1128
            D+  LL
Sbjct: 237  DIVRLL 242

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 74.8 bits (185), Expect = 8e-15
 Identities = 15/61 (24%), Positives = 24/61 (39%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
           PL  A   G +E  ++L+   AN +  D     P   A  +   ++  LL  E      H
Sbjct: 193 PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHHHH 252

Query: 277 N 277
           +
Sbjct: 253 H 253

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 74.8 bits (185), Expect = 8e-15
 Identities = 19/57 (33%), Positives = 30/57 (52%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           PL  A       + E LI + A+VNA+D    + LH AA+ + ++   +LL  GA+ 
Sbjct: 127 PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK 183

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 72.5 bits (179), Expect = 5e-14
 Identities = 19/58 (32%), Positives = 26/58 (44%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
           G   LH A  Y   +  + L++A A+ N  D    TPLH A S     V  +L+   A
Sbjct: 57  GETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 66.7 bits (164), Expect = 4e-12
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGA-NVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G  PLH A S     V ++LI+  A +++A      TPL  AA  +   +   L++  AD
Sbjct: 90  GRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD 149

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 60.9 bits (149), Expect = 4e-10
 Identities = 22/74 (29%), Positives = 25/74 (33%), Gaps = 14/74 (18%)

Query: 214 GLVPLHNACSYG-------------HFEVTEMLIKAGANV-NAMDLWQFTPLHEAASKSR 259
           G  PL  A   G                V    I  GA++ N  D    T LH AA  SR
Sbjct: 10  GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR 69

Query: 260 LEVCSLLLSEGADP 273
            +    LL   AD 
Sbjct: 70  SDAAKRLLEASADA 83

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 60.9 bits (149), Expect = 4e-10
 Identities = 13/51 (25%), Positives = 19/51 (37%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPN 51
            G  +  + LL   A+    D     P   A    H D+VRLL     + +
Sbjct: 200 EGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHH 250

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 55.9 bits (136), Expect = 2e-08
 Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 3/64 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
            +TPL  A            + L+   A+ +  +     P  +A +  H D++  L    
Sbjct: 190 EETPLFLAARE---GSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246

Query: 765 AKVN 768
              +
Sbjct: 247 HHHH 250

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 54.4 bits (132), Expect = 5e-08
 Identities = 24/124 (19%), Positives = 36/124 (29%), Gaps = 47/124 (37%)

Query: 17  IHARDDGGLHPLHNACSFG-------------HADVVRLLLEADAN-PNTRDNWNFTPLH 62
           ++ R   G  PL  A   G                V+   +   A+  N  D    T LH
Sbjct: 3   VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALH 62

Query: 63  EAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEG 121
            AA   ++D       A+                           L    AD  +++  G
Sbjct: 63  LAARYSRSDA------AK--------------------------RLLEASADANIQDNMG 90

Query: 122 QTPL 125
           +TPL
Sbjct: 91  RTPL 94

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 54.0 bits (131), Expect = 7e-08
 Identities = 12/44 (27%), Positives = 17/44 (38%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKN 1107
            + H AN ++ D     P   A  +   DIVRLL          +
Sbjct: 210  LDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHHHHH 253

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 45.2 bits (108), Expect = 6e-05
 Identities = 17/64 (26%), Positives = 23/64 (35%), Gaps = 21/64 (32%)

Query: 569 NVNVADLWKFTPLHEAA--------------------AKALLQHGADI-NLKNTDGKTAL 607
           +VNV     FTPL  A+                        +  GA + N  +  G+TAL
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETAL 61

Query: 608 DLAV 611
            LA 
Sbjct: 62  HLAA 65

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  150 bits (382), Expect = 1e-41
 Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 52/193 (26%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
            N RD   R  TPL  A        ++ L+ +   +       D  G T L  A +  R 
Sbjct: 28  RNYRDSYNR--TPLMVACMLGMENAIDKLVENFDKL----EDKDIEGSTALIWAVKNNRL 81

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGL 545
            ++  L LS               KG +            VN +D +G+  TPL ++   
Sbjct: 82  GIAEKL-LS---------------KGSN------------VNTKDFSGK--TPLMWSI-- 109

Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINL 598
                   +G+ E++  L++HGANVN  +L   TPL  A+        K LL+ GADI+ 
Sbjct: 110 -------IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA 162

Query: 599 KNTDGKTALDLAV 611
           ++  G TA   A 
Sbjct: 163 RDLTGLTAEASAR 175

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  124 bits (314), Expect = 1e-32
 Identities = 46/201 (22%), Positives = 76/201 (37%), Gaps = 57/201 (28%)

Query: 403 LLEASKGGDMTVVTRLLSSCPH--IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD 460
           L+ A   G    + +L+    +   +  +D++G   T L +A   NR+ + E LL+ G++
Sbjct: 39  LMVACMLGMENAIDKLVE---NFDKLEDKDIEGS--TALIWAVKNNRLGIAEKLLSKGSN 93

Query: 461 VHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKL 520
           V    N  D  G TPL  +   G +++S  L L                 G +       
Sbjct: 94  V----NTKDFSGKTPLMWSIIFGYSEMSYFL-LE---------------HGAN------- 126

Query: 521 VNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTP 580
                VN R+  G   TPL  A+          YG  E+ + L++ GA+++  DL   T 
Sbjct: 127 -----VNDRNLEGE--TPLIVAS---------KYGRSEIVKKLLELGADISARDLTGLTA 170

Query: 581 LHEAA-------AKALLQHGA 594
              A         K   +   
Sbjct: 171 EASARIFGRQEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 91.7 bits (229), Expect = 3e-21
 Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 33/128 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
             R  + E LL+ G++++ +D  G  PL  +  FG++++   LLE  AN N R+    TP
Sbjct: 78  NNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETP 137

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQ 119
           L  A+  G++++       +                           L   GAD   ++ 
Sbjct: 138 LIVASKYGRSEI------VK--------------------------KLLELGADISARDL 165

Query: 120 EGQTPLDL 127
            G T    
Sbjct: 166 TGLTAEAS 173

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 90.9 bits (227), Expect = 5e-21
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 33/126 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G ++ ++ L+ +   +  +D  G   L  A       +   LL   +N NT+D    TP
Sbjct: 45  LGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTP 104

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQ 119
           L  +   G +++      +                           +L  HGA+   +N 
Sbjct: 105 LMWSIIFGYSEM------SY--------------------------FLLEHGANVNDRNL 132

Query: 120 EGQTPL 125
           EG+TPL
Sbjct: 133 EGETPL 138

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 88.2 bits (220), Expect = 6e-20
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 667 IKDEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVE 725
            +D +    L+ AC  G  + + K + +   +  K    G T L  AV +    R  I E
Sbjct: 30  YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIE-GSTALIWAVKN---NRLGIAE 85

Query: 726 SLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDD 785
            L+ KG+++N K+     P+  +   G+ ++   LL  GA VN  ++ G+T L   ++  
Sbjct: 86  KLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG 145

Query: 786 KTQAVRVLLSHNAD 799
           +++ V+ LL   AD
Sbjct: 146 RSEIVKKLLELGAD 159

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 86.7 bits (216), Expect = 2e-19
 Identities = 22/72 (30%), Positives = 39/72 (54%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +G  ++  +LL  GA+++ R+  G  PL  A  +G +++V+ LLE  A+ + RD    T 
Sbjct: 111 FGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTA 170

Query: 61  LHEAAAKGKTDV 72
              A   G+ +V
Sbjct: 171 EASARIFGRQEV 182

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 86.3 bits (215), Expect = 3e-19
 Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 1062 HNVKHGANV--NVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VR 1118
             ++    +   N  D +  TPL  A   G  + +  L+++      K+ +G+T L   V+
Sbjct: 18   KSINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVK 77

Query: 1119 EGDQDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNS 1165
                 +++ L             G + L+ +   G       LL    N+N R+ +G   
Sbjct: 78   NNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGE-- 135

Query: 1166 TPLHLAA 1172
            TPL +A+
Sbjct: 136  TPLIVAS 142

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 84.4 bits (210), Expect = 1e-18
 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPL  ++         +   L+  GA++N++N E   P+ +A+  G  +++  LL LG
Sbjct: 101 GKTPLMWSIIF---GYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG 157

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           A ++  D+ G TA        + + +++      
Sbjct: 158 ADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 83.2 bits (207), Expect = 3e-18
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 23/110 (20%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +  G+NVN  D    TPL  +   G +++   LL+HGA+ + +N +G TP          
Sbjct: 88   LSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETP---------- 137

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                      L+ A+K G    V+KLL    +I+ RD  G   T    A 
Sbjct: 138  ----------LIVASKYGRSEIVKKLLELGADISARDLTGL--TAEASAR 175

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 77.0 bits (191), Expect = 5e-16
 Identities = 24/71 (33%), Positives = 37/71 (52%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
           PL  +  +G+ E++  L++ GANVN  +L   TPL  A+   R E+   LL  GAD +  
Sbjct: 104 PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISAR 163

Query: 277 NCHSKSAIDVA 287
           +    +A   A
Sbjct: 164 DLTGLTAEASA 174

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 76.3 bits (189), Expect = 8e-16
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           PL  AC  G     + L++    +   D+   T L  A   +RL +   LLS+G++
Sbjct: 38  PLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN 93

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 76.3 bits (189), Expect = 8e-16
 Identities = 17/56 (30%), Positives = 23/56 (41%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            L  A       + E L+  G+NVN  D    TPL  +      E+   LL  GA+
Sbjct: 71  ALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN 126

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 71.7 bits (177), Expect = 3e-14
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++HGANVN  +L   TPL  A+  G+++IV+ LL+ GAD S ++  G T        G Q
Sbjct: 121  LEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQ 180

Query: 1123 DVSDLL 1128
            +V  + 
Sbjct: 181  EVIKIF 186

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 71.7 bits (177), Expect = 3e-14
 Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 39/126 (30%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
                 +++L       + RD     PL  AC  G  + +  L+E       +D    T 
Sbjct: 18  KSINQNLDFL------RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTA 71

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQ 119
           L  A    +  +      AE                           L + G++   K+ 
Sbjct: 72  LIWAVKNNRLGI------AE--------------------------KLLSKGSNVNTKDF 99

Query: 120 EGQTPL 125
            G+TPL
Sbjct: 100 SGKTPL 105

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 70.9 bits (175), Expect = 6e-14
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 9/95 (9%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G+                 ++ L       N ++     P+ +A  LG  + +D L+   
Sbjct: 8   GEIVEKIKD---EKSINQNLDFLR------NYRDSYNRTPLMVACMLGMENAIDKLVENF 58

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            K+   D+ G TAL    ++++      LLS  ++
Sbjct: 59  DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN 93

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 67.8 bits (167), Expect = 6e-13
 Identities = 17/52 (32%), Positives = 25/52 (48%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLS 268
           PL  A  YG  E+ + L++ GA+++A DL   T    A    R EV  +   
Sbjct: 137 PLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTE 188

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 56.2 bits (137), Expect = 5e-09
 Identities = 19/46 (41%), Positives = 27/46 (58%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEA 46
           YGR ++V+ LL  GA I ARD  GL    +A  FG  +V+++  E 
Sbjct: 144 YGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEV 189

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 50.9 bits (123), Expect = 4e-07
 Identities = 9/59 (15%), Positives = 14/59 (23%), Gaps = 6/59 (10%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G +           +  + L       N  D +  TPL  A           L+     
Sbjct: 8   GEIVEKIKDEKSINQNLDFLR------NYRDSYNRTPLMVACMLGMENAIDKLVENFDK 60

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 48.5 bits (117), Expect = 2e-06
 Identities = 7/38 (18%), Positives = 19/38 (50%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGA 1101
            ++ GA+++  DL   T    A   G+ +++++  +   
Sbjct: 154  LELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 46.2 bits (111), Expect = 1e-05
 Identities = 10/65 (15%), Positives = 18/65 (27%), Gaps = 6/65 (9%)

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
           +  +K       +  +      LD L       N  D   +T L          A+  L+
Sbjct: 2   SHMDKNGEIVEKIKDEKSINQNLDFL------RNYRDSYNRTPLMVACMLGMENAIDKLV 55

Query: 795 SHNAD 799
            +   
Sbjct: 56  ENFDK 60

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 43.5 bits (104), Expect = 1e-04
 Identities = 19/113 (16%), Positives = 28/113 (24%), Gaps = 42/113 (37%)

Query: 14  GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVC 73
           G+ +   D  G               +  L       N RD++N TPL  A   G  +  
Sbjct: 1   GSHM---DKNGEIVEKIKDEKSINQNLDFLR------NYRDSYNRTPLMVACMLGMENA- 50

Query: 74  IGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                 +                           L  +      K+ EG T L
Sbjct: 51  -----ID--------------------------KLVENFDKLEDKDIEGSTAL 72

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  151 bits (384), Expect = 2e-41
 Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 54/216 (25%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGA-DV 461
           L+EA++   +  V  L+ +   + + +D +G   T LH AA      VV+YLL++G  DV
Sbjct: 48  LMEAAENNHLEAVKYLIKAGALV-DPKDAEGS--TCLHLAAKKGHYEVVQYLLSNGQMDV 104

Query: 462 HSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLV 521
               N  D  G+TP+  A +     L  LL LS               KG D        
Sbjct: 105 ----NCQDDGGWTPMIWATEYKHVDLVKLL-LS---------------KGSD-------- 136

Query: 522 NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPL 581
               +N RD        LH+AA           G  ++ E+L+    +++  ++   +PL
Sbjct: 137 ----INIRDNEEN--ICLHWAA---------FSGCVDIAEILLAAKCDLHAVNIHGDSPL 181

Query: 582 HEAA-------AKALLQHGADINLKNTDGKTALDLA 610
           H AA           L   +D+ LKN +G+T L  A
Sbjct: 182 HIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCA 217

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  144 bits (366), Expect = 5e-39
 Identities = 48/194 (24%), Positives = 72/194 (37%), Gaps = 53/194 (27%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
                 + R  +PLH AA    V +   L+  GA++    +   +   TPL EAA+    
Sbjct: 4   FKMEHQNKR--SPLHAAAEAGHVDICHMLVQAGANI----DTCSEDQRTPLMEAAENNHL 57

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGL 545
           +    L +                 G              V+ +D  G   T LH AA  
Sbjct: 58  EAVKYL-IK---------------AGAL------------VDPKDAEGS--TCLHLAA-- 85

Query: 546 VPLHNACSYGHYEVTEMLVKHGA-NVNVADLWKFTPLHEAA-------AKALLQHGADIN 597
                    GHYEV + L+ +G  +VN  D   +TP+  A         K LL  G+DIN
Sbjct: 86  -------KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN 138

Query: 598 LKNTDGKTALDLAV 611
           +++ +    L  A 
Sbjct: 139 IRDNEENICLHWAA 152

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  134 bits (339), Expect = 2e-35
 Identities = 49/200 (24%), Positives = 77/200 (38%), Gaps = 52/200 (26%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  A+K G   VV  LLS+    VNC+D  G   TP+ +A  Y  V +V+ LL+ G+D+ 
Sbjct: 81  LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGW--TPMIWATEYKHVDLVKLLLSKGSDI- 137

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              N  D      LH AA  G   ++ +L L+                  D         
Sbjct: 138 ---NIRDNEENICLHWAAFSGCVDIAEIL-LA---------------AKCD--------- 169

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              ++A +  G   +PLH AA             Y+   + +   ++V + +    TPL 
Sbjct: 170 ---LHAVNIHGD--SPLHIAA---------RENRYDCVVLFLSRDSDVTLKNKEGETPLQ 215

Query: 583 EAA-------AKALLQHGAD 595
            A+       A  + +   D
Sbjct: 216 CASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  100 bits (252), Expect = 9e-24
 Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 33/128 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           Y   D+V+ LL+ G+ I+ RD+     LH A   G  D+  +LL A  + +  +    +P
Sbjct: 121 YKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSP 180

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQ 119
           LH AA + + D                                      +  +D  LKN+
Sbjct: 181 LHIAARENRYDC------VV--------------------------LFLSRDSDVTLKNK 208

Query: 120 EGQTPLDL 127
           EG+TPL  
Sbjct: 209 EGETPLQC 216

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 97.5 bits (244), Expect = 9e-23
 Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 17/124 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            V+ GAN++     + TPL EAA     + V+ L++ GA    K+ +G+T L L  ++G  
Sbjct: 31   VQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHY 90

Query: 1123 DVSDLL-------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPL 1168
            +V   L              G + ++ A +  ++  V+ LL+   +IN RD +      L
Sbjct: 91   EVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEEN--ICL 148

Query: 1169 HLAA 1172
            H AA
Sbjct: 149  HWAA 152

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 95.9 bits (240), Expect = 3e-22
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 18/126 (14%)

Query: 1068 ANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSD 1126
             N  +    K +PLH AA  G  DI  +L+Q GA+    + D  TPL         +   
Sbjct: 2    MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVK 61

Query: 1127 LL------------RGNSALLDAAKKGNLGRVQKLLT--ADNINCRDAQGRNSTPLHLAA 1172
             L             G++ L  AAKKG+   VQ LL+    ++NC+D  G   TP+  A 
Sbjct: 62   YLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGW--TPMIWAT 119

Query: 1173 GEKRHL 1178
             E +H+
Sbjct: 120  -EYKHV 124

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 92.5 bits (231), Expect = 5e-21
 Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 23/138 (16%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  D+   L+ +GA+I    +    PL  A    H + V+ L++A A  + +D    T 
Sbjct: 21  AGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTC 80

Query: 61  LHEAAAKGKTDVCIGIYFAEH-----SSKSNQYVYGIGGGTGCPMH-------KDRSCYL 108
           LH AA KG  +V    Y   +     + + +      GG T  PM         D    L
Sbjct: 81  LHLAAKKGHYEVV--QYLLSNGQMDVNCQDD------GGWT--PMIWATEYKHVDLVKLL 130

Query: 109 -AHGADPFLKNQEGQTPL 125
            + G+D  +++ E    L
Sbjct: 131 LSKGSDINIRDNEENICL 148

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 89.8 bits (224), Expect = 5e-20
 Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 17/124 (13%)

Query: 1064 VKHGA-NVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGD 1121
            + +G  +VN  D   +TP+  A      D+V+LLL  G+D + ++ +    L      G 
Sbjct: 97   LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGC 156

Query: 1122 QDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPL 1168
             D++++L             G+S L  AA++     V   L+ D ++  ++ +G   TPL
Sbjct: 157  VDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGE--TPL 214

Query: 1169 HLAA 1172
              A+
Sbjct: 215  QCAS 218

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 89.8 bits (224), Expect = 5e-20
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
            +  LH A    +     I E L+     L+  N    +P+H+AA     D +   L   
Sbjct: 144 ENICLHWAA---FSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD 200

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTS 801
           + V L +  G+T L   + + +  +   +     D++
Sbjct: 201 SDVTLKNKEGETPLQCASLNSQVWSALQMSKALQDSA 237

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 89.4 bits (223), Expect = 5e-20
 Identities = 22/72 (30%), Positives = 32/72 (44%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  D+ E LLA+   +HA +  G  PLH A      D V L L  D++   ++    TP
Sbjct: 154 SGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETP 213

Query: 61  LHEAAAKGKTDV 72
           L  A+   +   
Sbjct: 214 LQCASLNSQVWS 225

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 88.2 bits (220), Expect = 2e-19
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TP+  A      K   +V+ L+ KG+ +N ++ E    +H AA  G +D+ + LL   
Sbjct: 111 GWTPMIWATEY---KHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK 167

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
             ++ V++ G + LH  AR+++   V + LS ++D
Sbjct: 168 CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD 202

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 86.7 bits (216), Expect = 5e-19
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 4/102 (3%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
              +H     +PLH A  +       I   L++ GA+++  +++   P+  AA+  HL+ 
Sbjct: 4   FKMEHQN-KRSPLHAAAEA---GHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEA 59

Query: 757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           +  L++ GA V+  D  G T LH  A+    + V+ LLS+  
Sbjct: 60  VKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ 101

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 82.8 bits (206), Expect = 9e-18
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAH-LNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
           G T LH A          +V+ L+  G   +N ++     P+  A +  H+D++  LL  
Sbjct: 77  GSTCLHLAA---KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK 133

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           G+ +N+ D      LH  A         +LL+   D
Sbjct: 134 GSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD 169

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 81.7 bits (203), Expect = 3e-17
 Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 4/96 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
             TPL  A  +        V+ LI+ GA ++ K+ E    +HLAA  GH +V+  LL  G
Sbjct: 44  QRTPLMEAAEN---NHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNG 100

Query: 765 AK-VNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
              VN  D  G T +           V++LLS  +D
Sbjct: 101 QMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD 136

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 80.9 bits (201), Expect = 5e-17
 Identities = 24/59 (40%), Positives = 32/59 (54%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
              PLH A   GH ++  ML++AGAN++     Q TPL EAA  + LE    L+  GA 
Sbjct: 11  KRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL 69

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 80.9 bits (201), Expect = 5e-17
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
             + LH A   G  ++ E+L+ A  +++A+++   +PLH AA ++R +   L LS  +D 
Sbjct: 144 ENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDV 203

Query: 274 TLHNCHSKSAIDVA 287
           TL N   ++ +  A
Sbjct: 204 TLKNKEGETPLQCA 217

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 78.2 bits (194), Expect = 3e-16
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +    +++  ++   +PLH AA + + D V L L   +D + KN++G TPL         
Sbjct: 164  LAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQV 223

Query: 1123 DVSDLLRGNSALLDAA 1138
              +  +  + AL D+A
Sbjct: 224  WSALQM--SKALQDSA 237

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 76.7 bits (190), Expect = 1e-15
 Identities = 25/58 (43%), Positives = 27/58 (46%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
              PL  A    H E  + LIKAGA V+  D    T LH AA K   EV   LLS G 
Sbjct: 44  QRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ 101

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 75.5 bits (187), Expect = 4e-15
 Identities = 16/60 (26%), Positives = 31/60 (51%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  P+  A  Y H ++ ++L+  G+++N  D  +   LH AA    +++  +LL+   D 
Sbjct: 111 GWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDL 170

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 73.2 bits (181), Expect = 2e-14
 Identities = 11/56 (19%), Positives = 22/56 (39%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           PLH A     ++   + +   ++V   +    TPL  A+  S++     +     D
Sbjct: 180 PLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 72.8 bits (180), Expect = 3e-14
 Identities = 27/110 (24%), Positives = 35/110 (31%), Gaps = 33/110 (30%)

Query: 17  IHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGI 76
                     PLH A   GH D+  +L++A AN +T      TPL EAA     +     
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEA---- 59

Query: 77  YFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
              +                          YL   GA    K+ EG T L
Sbjct: 60  --VK--------------------------YLIKAGALVDPKDAEGSTCL 81

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 70.9 bits (175), Expect = 1e-13
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGA-NVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G   LH A   GH+EV + L+  G  +VN  D   +TP+  A     +++  LLLS+G+D
Sbjct: 77  GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD 136

Query: 273 PTLHNCHSKSAIDVA 287
             + +      +  A
Sbjct: 137 INIRDNEENICLHWA 151

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 64.4 bits (158), Expect = 2e-11
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
             +++   +P+H AA+ GH+D+   L++ GA ++      +T L   A ++  +AV+ L+
Sbjct: 5   KMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLI 64

Query: 795 SHNAD 799
              A 
Sbjct: 65  KAGAL 69

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 60.5 bits (148), Expect = 4e-10
 Identities = 9/49 (18%), Positives = 17/49 (34%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN 49
             R D V   L+  + +  ++  G  PL  A           + +A  +
Sbjct: 187 ENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 56.7 bits (138), Expect = 7e-09
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 7/51 (13%)

Query: 568 ANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
            N  +    K +PLH AA          L+Q GA+I+  + D +T L  A 
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAA 52

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 45.5 bits (109), Expect = 4e-05
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 238 ANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            N       + +PLH AA    +++C +L+  GA+
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN 36

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  151 bits (383), Expect = 2e-41
 Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 54/217 (24%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGA-DV 461
           L  A++        RLL +     N +D  GR  TPLH A   +   V + L+ + A D+
Sbjct: 29  LHLAARYSRSDAAKRLLEASADA-NIQDNMGR--TPLHAAVSADAQGVFQILIRNRATDL 85

Query: 462 HSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLV 521
               +A    G TPL  AA+     +   L ++                  D        
Sbjct: 86  ----DARMHDGTTPLILAARLAVEGMLEDL-IN---------------SHAD-------- 117

Query: 522 NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPL 581
               VNA D  G+  + LH+AA         +  + +   +L+K+GAN ++ +  + TPL
Sbjct: 118 ----VNAVDDLGK--SALHWAA---------AVNNVDAAVVLLKNGANKDMQNNREETPL 162

Query: 582 HEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
             AA       AK LL H A+ ++ +   +   D+A 
Sbjct: 163 FLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQ 199

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  133 bits (338), Expect = 2e-35
 Identities = 44/202 (21%), Positives = 67/202 (33%), Gaps = 52/202 (25%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  A       V   L+ +    ++ R  DG   TPL  AA      ++E L+   ADV 
Sbjct: 62  LHAAVSADAQGVFQILIRNRATDLDARMHDGT--TPLILAARLAVEGMLEDLINSHADV- 118

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              NA D  G + LH AA       + +L L                 G +         
Sbjct: 119 ---NAVDDLGKSALHWAAAVNNVDAAVVL-LK---------------NGAN--------- 150

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
               + ++      TPL  AA           G YE  ++L+ H AN ++ D     P  
Sbjct: 151 ---KDMQNNREE--TPLFLAA---------REGSYETAKVLLDHFANRDITDHMDRLPRD 196

Query: 583 EAA-------AKALLQHGADIN 597
            A         + L ++    +
Sbjct: 197 IAQERMHHDIVRLLDEYNLVRS 218

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  102 bits (258), Expect = 1e-24
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 53/180 (29%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L+ A++     ++  L++S   + N  D  G+  + LH+AA  N V     LL +GA+  
Sbjct: 96  LILAARLAVEGMLEDLINSHADV-NAVDDLGK--SALHWAAAVNNVDAAVVLLKNGANK- 151

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              +  +    TPL  AA++G  + + +L L                   +         
Sbjct: 152 ---DMQNNREETPLFLAAREGSYETAKVL-LD---------------HFAN--------- 183

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
               +  D   R   P   A             H+++  +L ++    +         LH
Sbjct: 184 ---RDITDHMDR--LPRDIAQ---------ERMHHDIVRLLDEYNLVRS-------PQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 91.3 bits (228), Expect = 9e-21
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 18/125 (14%)

Query: 1064 VKHGANV-NVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGD 1121
            +  GA++ N  D    T LH AA   ++D  + LL+  AD + ++  G TPL   V    
Sbjct: 11   IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA 70

Query: 1122 QDVSDLL-------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTP 1167
            Q V  +L              G + L+ AA+    G ++ L+ +  ++N  D  G+  + 
Sbjct: 71   QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK--SA 128

Query: 1168 LHLAA 1172
            LH AA
Sbjct: 129  LHWAA 133

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 90.2 bits (225), Expect = 2e-20
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 4/96 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAH-LNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
           G TPLH AV++     + + + LIR  A  L+ +  +   P+ LAA L    +L+ L+  
Sbjct: 58  GRTPLHAAVSA---DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS 114

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            A VN VD LG++ALH  A  +   A  VLL + A+
Sbjct: 115 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 150

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 89.4 bits (223), Expect = 4e-20
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPL  A        + ++E LI   A +N  +    + +H AA + ++D    LL+ G
Sbjct: 92  GTTPLILAARL---AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 148

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A  ++ +   +T L   AR+   +  +VLL H A+
Sbjct: 149 ANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN 183

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 88.6 bits (221), Expect = 8e-20
 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 19/93 (20%)

Query: 527 NARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA- 585
           N  D  G   T LH AA          Y   +  + L++  A+ N+ D    TPLH A  
Sbjct: 19  NQTDRTGE--TALHLAA---------RYSRSDAAKRLLEASADANIQDNMGRTPLHAAVS 67

Query: 586 ------AKALLQHGA-DINLKNTDGKTALDLAV 611
                  + L+++ A D++ +  DG T L LA 
Sbjct: 68  ADAQGVFQILIRNRATDLDARMHDGTTPLILAA 100

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 87.9 bits (219), Expect = 1e-19
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 31/127 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
              + ++E L+ S A ++A DD G   LH A +  + D   +LL+  AN + ++N   TP
Sbjct: 102 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP 161

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           L  AA +G  +       A+                           L H A+  + +  
Sbjct: 162 LFLAAREGSYET------AK-------------------------VLLDHFANRDITDHM 190

Query: 121 GQTPLDL 127
            + P D+
Sbjct: 191 DRLPRDI 197

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 87.5 bits (218), Expect = 2e-19
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G + LH A              L++ GA+ + +N     P+ LAA  G  +    LL   
Sbjct: 125 GKSALHWAAAV---NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 181

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTS 801
           A  ++ D + +              VR+L  +N   S
Sbjct: 182 ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 87.1 bits (217), Expect = 2e-19
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 17/124 (13%)

Query: 1064 VKHGA-NVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGD 1121
            +++ A +++       TPL  AA      ++  L+   AD +  +  G + L       +
Sbjct: 78   IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 137

Query: 1122 QDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPL 1168
             D + +L            R  + L  AA++G+    + LL    N +  D   R   P 
Sbjct: 138  VDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDR--LPR 195

Query: 1169 HLAA 1172
             +A 
Sbjct: 196  DIAQ 199

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 85.2 bits (212), Expect = 1e-18
 Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 5/106 (4%)

Query: 695 DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHL 754
            + N      G+T LH A       R    + L+   A  N ++     P+H A      
Sbjct: 16  SLHNQTDRT-GETALHLAARY---SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQ 71

Query: 755 DVLDTLLRLGAK-VNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            V   L+R  A  ++     G T L   AR      +  L++ +AD
Sbjct: 72  GVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD 117

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 85.2 bits (212), Expect = 1e-18
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 32/126 (25%)

Query: 1   YGRKDVVEYLLASGAS-IHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
              + V + L+ + A+ + AR   G  PL  A       ++  L+ + A+ N  D+   +
Sbjct: 68  ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKS 127

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
            LH AAA    D       A                            L +GA+  ++N 
Sbjct: 128 ALHWAAAVNNVDA------AV-------------------------VLLKNGANKDMQNN 156

Query: 120 EGQTPL 125
             +TPL
Sbjct: 157 REETPL 162

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 85.2 bits (212), Expect = 1e-18
 Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 32/126 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADA-NPNTRDNWNFT 59
           Y R D  + LL + A  + +D+ G  PLH A S     V ++L+   A + + R +   T
Sbjct: 35  YSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTT 94

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
           PL  AA      +       E                           +   AD    + 
Sbjct: 95  PLILAARLAVEGM------LE-------------------------DLINSHADVNAVDD 123

Query: 120 EGQTPL 125
            G++ L
Sbjct: 124 LGKSAL 129

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 84.8 bits (211), Expect = 2e-18
 Identities = 17/72 (23%), Positives = 31/72 (43%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
               D    LL +GA+   +++    PL  A   G  +  ++LL+  AN +  D+ +  P
Sbjct: 135 VNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP 194

Query: 61  LHEAAAKGKTDV 72
              A  +   D+
Sbjct: 195 RDIAQERMHHDI 206

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 76.3 bits (189), Expect = 2e-15
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
            LH A +  + +   +L+K GAN +  +  + TPL  AA +   E   +LL   A+  + 
Sbjct: 128 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDIT 187

Query: 277 NCHSKSAIDVA 287
           +   +   D+A
Sbjct: 188 DHMDRLPRDIA 198

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 74.8 bits (185), Expect = 5e-15
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K+GAN ++ +  + TPL  AA +G  +  ++LL H A+    +     P D+       
Sbjct: 145  LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHH 204

Query: 1123 DVSDLLRGNSALLDAAKKG 1141
            D+  LL   + +      G
Sbjct: 205  DIVRLLDEYNLVRSPQLHG 223

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 74.0 bits (183), Expect = 9e-15
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD--PT 274
           PL  A   G +E  ++L+   AN +  D     P   A  +   ++  LL        P 
Sbjct: 161 PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPQ 220

Query: 275 LH 276
           LH
Sbjct: 221 LH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 73.6 bits (182), Expect = 1e-14
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G  PL  A       + E LI + A+VNA+D    + LH AA+ + ++   +LL  GA+
Sbjct: 92  GTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 150

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 72.8 bits (180), Expect = 2e-14
 Identities = 19/59 (32%), Positives = 26/59 (44%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G   LH A  Y   +  + L++A A+ N  D    TPLH A S     V  +L+   A 
Sbjct: 25  GETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT 83

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 70.5 bits (174), Expect = 1e-13
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 721 KAIVESLIRKGAHL-NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALH 779
            A++   I +GA L N+ ++     +HLAA     D    LL   A  N+ D +G+T LH
Sbjct: 4   PAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLH 63

Query: 780 RTARDDKTQAVRVLLSHNAD 799
                D     ++L+ + A 
Sbjct: 64  AAVSADAQGVFQILIRNRAT 83

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 67.8 bits (167), Expect = 1e-12
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGA-NVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G  PLH A S     V ++LI+  A +++A      TPL  AA  +   +   L++  AD
Sbjct: 58  GRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD 117

Query: 273 PTLHNCHSKSA 283
               +   KSA
Sbjct: 118 VNAVDDLGKSA 128

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 62.8 bits (154), Expect = 5e-11
 Identities = 14/55 (25%), Positives = 22/55 (40%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDN 55
            G  +  + LL   A+    D     P   A    H D+VRLL E +   + + +
Sbjct: 168 EGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPQLH 222

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 61.3 bits (150), Expect = 2e-10
 Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 18/101 (17%)

Query: 1088 GKADIVRLLLQHGAD-PSKKNRDGATPLDL-VREGDQDVSDLL------------RGNSA 1133
                ++   +  GA   ++ +R G T L L  R    D +  L             G + 
Sbjct: 2    DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61

Query: 1134 LLDAAKKGNLGRVQKLLT--ADNINCRDAQGRNSTPLHLAA 1172
            L  A      G  Q L+   A +++ R   G   TPL LAA
Sbjct: 62   LHAAVSADAQGVFQILIRNRATDLDARMHDGT--TPLILAA 100

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 57.0 bits (139), Expect = 5e-09
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 225 GHFEVTEMLIKAGANV-NAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
               V    I  GA++ N  D    T LH AA  SR +    LL   AD 
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA 51

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  150 bits (382), Expect = 5e-41
 Identities = 59/330 (17%), Positives = 91/330 (27%), Gaps = 108/330 (32%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
           +   D        +  A  Y        L+  G DV       DK   T LH AA   R 
Sbjct: 2   MTHIDDYST--WDIVKATQYGIYERCRELVEAGYDV----RQPDKENVTLLHWAAINNRI 55

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGL 545
            L     +S               KG              V+        STPLH+A   
Sbjct: 56  DLVKYY-IS---------------KGAI------------VDQLGGD-LNSTPLHWAT-- 84

Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINL 598
                    GH  +   L+K+GA+ ++ D    + +H AA          L+  G D+++
Sbjct: 85  -------RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM 137

Query: 599 KNTDGKTALDLAVPCTRAVLSGDHKKE--ELL-------EAARMMGGGLHRYTWPLGTTD 649
            + +G T L  A           H  +   LL                    T  L    
Sbjct: 138 MDQNGMTPLMWAA-------YRTHSVDPTRLLLTFNVSVNLGDKYHK----NT-AL---- 181

Query: 650 IGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTP 708
                                   H    A   G+ + +   L +   V+ ++   G++ 
Sbjct: 182 ------------------------HW---AVLAGNTTVISLLLEAGANVDAQNIK-GESA 213

Query: 709 LHCAVTSPYPKRKAIVESLIRKGAHLNEKN 738
           L  A      K   ++  L          N
Sbjct: 214 LDLAK---QRKNVWMINHLQEARQAKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  149 bits (379), Expect = 1e-40
 Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 58/220 (26%)

Query: 403 LLEASKGGDMTVVTRLLSSCPH--IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD 460
           L  A+    + +V   +S      IV+    D   STPLH+A     +++V  L+ +GAD
Sbjct: 46  LHWAAINNRIDLVKYYIS---KGAIVDQLGGDLN-STPLHWATRQGHLSMVVQLMKYGAD 101

Query: 461 VHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKL 520
                +  D  G + +H AAQ G T + A L ++               KG D       
Sbjct: 102 P----SLIDGEGCSCIHLAAQFGHTSIVAYL-IA---------------KGQD------- 134

Query: 521 VNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHY-EVTEMLVKHGANVNVAD-LWKF 578
                V+  D  G   TPL +AA            H  + T +L+    +VN+ D   K 
Sbjct: 135 -----VDMMDQNGM--TPLMWAA---------YRTHSVDPTRLLLTFNVSVNLGDKYHKN 178

Query: 579 TPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
           T LH A           LL+ GA+++ +N  G++ALDLA 
Sbjct: 179 TALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAK 218

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  149 bits (378), Expect = 1e-40
 Identities = 50/218 (22%), Positives = 80/218 (36%), Gaps = 54/218 (24%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           +++A++ G       L+ +   +    D +    T LH+AA  NR+ +V+Y ++ GA V 
Sbjct: 13  IVKATQYGIYERCRELVEAGYDV-RQPDKENV--TLLHWAAINNRIDLVKYYISKGAIVD 69

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
                      TPLH A ++G   +   L +                 G D         
Sbjct: 70  QLGG---DLNSTPLHWATRQGHLSMVVQL-MK---------------YGAD--------- 101

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
               +  D  G   + +H AA          +GH  +   L+  G +V++ D    TPL 
Sbjct: 102 ---PSLIDGEGC--SCIHLAA---------QFGHTSIVAYLIAKGQDVDMMDQNGMTPLM 147

Query: 583 EAA--------AKALLQHGADINLK-NTDGKTALDLAV 611
            AA         + LL     +NL       TAL  AV
Sbjct: 148 WAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAV 185

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  133 bits (337), Expect = 4e-35
 Identities = 46/205 (22%), Positives = 76/205 (37%), Gaps = 51/205 (24%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  A++ G +++V +L+       +  D +G   + +H AA +   ++V YL+A G DV 
Sbjct: 80  LHWATRQGHLSMVVQLMKYGADP-SLIDGEGC--SCIHLAAQFGHTSIVAYLIAKGQDV- 135

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              +  D+ G TPL  AA +  +              DP R L                 
Sbjct: 136 ---DMMDQNGMTPLMWAAYRTHSV-------------DPTRLLLT--FNVS--------- 168

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              VN  D   +  T LH+A            G+  V  +L++ GANV+  ++   + L 
Sbjct: 169 ---VNLGDKYHKN-TALHWAV---------LAGNTTVISLLLEAGANVDAQNIKGESALD 215

Query: 583 EAA-------AKALLQHGADINLKN 600
            A           L +        N
Sbjct: 216 LAKQRKNVWMINHLQEARQAKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  112 bits (283), Expect = 7e-28
 Identities = 53/345 (15%), Positives = 94/345 (27%), Gaps = 120/345 (34%)

Query: 239 NVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSN 298
           ++  +D +    + +A      E C  L+  G D    +  + + +  A           
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAA---------- 50

Query: 299 EFKGHCLLEACRQGDPSRVKKFLTSD--VVNFKHPYTGDTPLPGTLLIDLLSDDKEFITV 356
                  ++         + K+  S   +V+        TPL                  
Sbjct: 51  -INNR--ID---------LVKYYISKGAIVDQLGGDLNSTPL--------------HWAT 84

Query: 357 AEEMQATVR---------EHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEAS 407
            +   + V             D     G + + +A +          S+V     L+  +
Sbjct: 85  RQGHLSMVVQLMKYGADPSLIDG---EGCSCIHLAAQFGHT------SIVAY---LI--A 130

Query: 408 KGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGY-NRVAVVEYLLAHGADVHSKDN 466
           KG D              V+  D +G   TPL +AA   + V     LL     V+  D 
Sbjct: 131 KGQD--------------VDMMDQNGM--TPLMWAAYRTHSVDPTRLLLTFNVSVNLGDK 174

Query: 467 ATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTV 526
                  T LH A   G T + +LL L                 G +            V
Sbjct: 175 ---YHKNTALHWAVLAGNTTVISLL-LE---------------AGAN------------V 203

Query: 527 NARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVN 571
           +A++  G   + L  A             +  +   L +      
Sbjct: 204 DAQNIKGE--SALDLAK---------QRKNVWMINHLQEARQAKG 237

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 99.8 bits (250), Expect = 2e-23
 Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPL--------- 1114
            +K+GA+ ++ D    + +H AA  G   IV  L+  G D    +++G TPL         
Sbjct: 96   MKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHS 155

Query: 1115 -----DLVREG-DQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTP 1167
                  L+      ++ D    N+AL  A   GN   +  LL A  N++ ++ +G   + 
Sbjct: 156  VDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGE--SA 213

Query: 1168 LHLAAGEKRHL 1178
            L LA  +++++
Sbjct: 214  LDLAK-QRKNV 223

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 98.3 bits (246), Expect = 6e-23
 Identities = 39/249 (15%), Positives = 74/249 (29%), Gaps = 87/249 (34%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
           PLH A   GH  +   L+K GA+ + +D    + +H AA      + + L+++G D  + 
Sbjct: 79  PLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMM 138

Query: 277 NCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT 336
           + +  + +  A            ++ H +                  D            
Sbjct: 139 DQNGMTPLMWAA-----------YRTHSV------------------DPTRL-------- 161

Query: 337 PLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSV 396
                    LL+ +            +V    D       TAL  A            +V
Sbjct: 162 ---------LLTFN-----------VSV-NLGDK--YHKNTALHWAVLAGNT------TV 192

Query: 397 VDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLA 456
           + L   LL    G +              V+ +++ G   + L  A     V ++ +L  
Sbjct: 193 ISL---LL--EAGAN--------------VDAQNIKGE--SALDLAKQRKNVWMINHLQE 231

Query: 457 HGADVHSKD 465
                   +
Sbjct: 232 ARQAKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 96.3 bits (241), Expect = 3e-22
 Identities = 34/159 (21%), Positives = 52/159 (32%), Gaps = 27/159 (16%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G   +V  L+  GA     D  G   +H A  FGH  +V  L+    + +  D    TP
Sbjct: 86  QGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTP 145

Query: 61  LHEAAAKG-KTDVC-----IGIYFAEHSSKSNQYVYGIGGGTGCPMH-------KDRSCY 107
           L  AA +    D               +             T   +H             
Sbjct: 146 LMWAAYRTHSVDPTRLLLTFN---VSVNLGDK-----YHKNT--ALHWAVLAGNTTVISL 195

Query: 108 L-AHGADPFLKNQEGQTPLDLTVAE---DVRSLLQDAMA 142
           L   GA+   +N +G++ LDL        + + LQ+A  
Sbjct: 196 LLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 93.7 bits (234), Expect = 2e-21
 Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 34/127 (26%)

Query: 1   YGRKDVVEYLLASGASIHARD-DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
             R D+V+Y ++ GA +     D    PLH A   GH  +V  L++  A+P+  D    +
Sbjct: 52  NNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCS 111

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKN 118
            +H AA  G T +                                  YL A G D  + +
Sbjct: 112 CIHLAAQFGHTSI------VA--------------------------YLIAKGQDVDMMD 139

Query: 119 QEGQTPL 125
           Q G TPL
Sbjct: 140 QNGMTPL 146

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 92.5 bits (231), Expect = 5e-21
 Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 32/126 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDN-WNFT 59
           YG  +    L+ +G  +   D   +  LH A      D+V+  +   A  +      N T
Sbjct: 19  YGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNST 78

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
           PLH A  +G   + +                                 + +GADP L + 
Sbjct: 79  PLHWATRQGHLSMVV-------------------------------QLMKYGADPSLIDG 107

Query: 120 EGQTPL 125
           EG + +
Sbjct: 108 EGCSCI 113

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 91.7 bits (229), Expect = 1e-20
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 18/131 (13%)

Query: 1064 VKHGANVNVADL-WKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGD 1121
            +  GA V+        TPLH A  +G   +V  L+++GADPS  + +G + + L  + G 
Sbjct: 62   ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGH 121

Query: 1122 QDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD--NINCRDAQGRNSTP 1167
              +   L             G + L+ AA + +     +LL     ++N  D   +N T 
Sbjct: 122  TSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKN-TA 180

Query: 1168 LHLAAGEKRHL 1178
            LH A     + 
Sbjct: 181  LHWAV-LAGNT 190

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 90.2 bits (225), Expect = 4e-20
 Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 17/119 (14%)

Query: 1069 NVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDL 1127
            ++   D +    + +A   G  +  R L++ G D  + +++  T L         D+   
Sbjct: 1    HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY 60

Query: 1128 L-------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                            ++ L  A ++G+L  V +L+    + +  D +G   + +HLAA
Sbjct: 61   YISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGC--SCIHLAA 117

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 87.9 bits (219), Expect = 2e-19
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 4/104 (3%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
           V+        TPLH A         ++V  L++ GA  +  + E  + IHLAA  GH  +
Sbjct: 68  VDQLGGDLNSTPLHWATRQ---GHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSI 124

Query: 757 LDTLLRLGAKVNLVDVLGQTALHRTA-RDDKTQAVRVLLSHNAD 799
           +  L+  G  V+++D  G T L   A R       R+LL+ N  
Sbjct: 125 VAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS 168

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 81.7 bits (203), Expect = 3e-17
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
               +  A              L+  G  + + +KE +  +H AA    +D++   +  G
Sbjct: 9   STWDIVKATQY---GIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKG 65

Query: 765 AKVNLVDV-LGQTALHRTARDDKTQAVRVLLSHNAD 799
           A V+ +   L  T LH   R      V  L+ + AD
Sbjct: 66  AIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD 101

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 80.2 bits (199), Expect = 9e-17
 Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 3/96 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKEL-LAPIHLAADLGHLDVLDTLLRL 763
           G TPL  A    +         L+     +N  +K      +H A   G+  V+  LL  
Sbjct: 142 GMTPLMWAAYRTH--SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA 199

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           GA V+  ++ G++AL    +      +  L      
Sbjct: 200 GANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 78.6 bits (195), Expect = 3e-16
 Identities = 18/57 (31%), Positives = 29/57 (50%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            +  A  YG +E    L++AG +V   D    T LH AA  +R+++    +S+GA  
Sbjct: 12  DIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIV 68

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 74.4 bits (184), Expect = 8e-15
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 21/97 (21%)

Query: 1064 VKHGANVNVAD-LWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQ 1122
            +    +VN+ D   K T LH A   G   ++ LLL+ GA+   +N  G + LDL      
Sbjct: 163  LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDL------ 216

Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRD 1159
                          A ++ N+  +  L  A      D
Sbjct: 217  --------------AKQRKNVWMINHLQEARQAKGYD 239

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 74.0 bits (183), Expect = 1e-14
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
               LH A   G+  V  +L++AGANV+A ++   + L  A  +  + + + L      
Sbjct: 177 KNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 72.1 bits (178), Expect = 5e-14
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 214 GLVPLHNACSYGH-FEVTEMLIKAGANVNAMD-LWQFTPLHEAASKSRLEVCSLLLSEGA 271
           G+ PL  A    H  + T +L+    +VN  D   + T LH A       V SLLL  GA
Sbjct: 142 GMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGA 201

Query: 272 DPTLHNCHSKSAIDVA 287
           +    N   +SA+D+A
Sbjct: 202 NVDAQNIKGESALDLA 217

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 64.0 bits (157), Expect = 3e-11
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDN 55
            G   V+  LL +GA++ A++  G   L  A    +  ++  L EA       DN
Sbjct: 187 AGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA-KGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 63.6 bits (156), Expect = 3e-11
 Identities = 18/96 (18%), Positives = 39/96 (40%), Gaps = 7/96 (7%)

Query: 676 LLEACRQGDPSRVKKFLTS---DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           L+ A  +       + L +    V N    Y  +T LH AV +       ++  L+  GA
Sbjct: 146 LMWAAYRTHSVDPTRLLLTFNVSV-NLGDKYHKNTALHWAVLA---GNTTVISLLLEAGA 201

Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVN 768
           +++ +N +  + + LA    ++ +++ L        
Sbjct: 202 NVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 63.2 bits (155), Expect = 5e-11
 Identities = 15/67 (22%), Positives = 24/67 (35%)

Query: 733 HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRV 792
           H+   +      I  A   G  +    L+  G  V   D    T LH  A +++   V+ 
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY 60

Query: 793 LLSHNAD 799
            +S  A 
Sbjct: 61  YISKGAI 67

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 58.2 bits (142), Expect = 3e-09
 Identities = 8/44 (18%), Positives = 18/44 (40%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKN 1107
            ++ GANV+  ++   + L  A  +    ++  L +        N
Sbjct: 197  LEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 54.7 bits (133), Expect = 3e-08
 Identities = 8/49 (16%), Positives = 19/49 (38%), Gaps = 7/49 (14%)

Query: 569 NVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLA 610
           ++   D +    + +A         + L++ G D+   + +  T L  A
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWA 49

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  149 bits (379), Expect = 8e-41
 Identities = 54/229 (23%), Positives = 78/229 (34%), Gaps = 50/229 (21%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           LL A+K  D+  +++LL      V+ R   G   T LH AA Y+ +     L+    ++ 
Sbjct: 7   LLLAAKENDVQALSKLLKFEGCEVHQRGAMGE--TALHIAALYDNLEAAMVLMEAAPELV 64

Query: 463 SKD-NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLV 521
            +   +    G T LH A       L   L L+               +G          
Sbjct: 65  FEPMTSELYEGQTALHIAVINQNVNLVRAL-LA---------------RGAS-------- 100

Query: 522 NPQTVNARDTAGRKSTPLHFAA--GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFT 579
               V+AR T        H     G  PL  A   G  E+  +L++HGA++   D    T
Sbjct: 101 ----VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNT 156

Query: 580 PLHEAA-----------AKALLQHGADINLK------NTDGKTALDLAV 611
            LH                 LL +    +LK      N  G T   LA 
Sbjct: 157 VLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAG 205

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 31/165 (18%), Positives = 48/165 (29%), Gaps = 63/165 (38%)

Query: 472 GFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT 531
             +PL  AA++   Q  + L                  +G +            V+ R  
Sbjct: 3   WESPLLLAAKENDVQALSKLLKF---------------EGCE------------VHQRGA 35

Query: 532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANV-----NVADLWKFTPLHEAA- 585
            G   T LH AA          Y + E   +L++    +             T LH A  
Sbjct: 36  MGE--TALHIAA---------LYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVI 84

Query: 586 ------AKALLQHGADINLKNTD-------------GKTALDLAV 611
                  +ALL  GA ++ + T              G+  L  A 
Sbjct: 85  NQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAA 129

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 83.0 bits (206), Expect = 9e-18
 Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 34/140 (24%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGAD-----PSKKNRDGATPLDL-VR 1118
              G  V+       T LH AA     +   +L++   +      + +  +G T L + V 
Sbjct: 25   FEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVI 84

Query: 1119 EGDQDVSDLL-------------------------RGNSALLDAAKKGNLGRVQKLLTAD 1153
              + ++   L                          G   L  AA  G+   V+ L+   
Sbjct: 85   NQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG 144

Query: 1154 -NINCRDAQGRNSTPLHLAA 1172
             +I  +D+ G   T LH+  
Sbjct: 145  ADIRAQDSLGN--TVLHILI 162

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 33/146 (22%), Positives = 49/146 (33%), Gaps = 46/146 (31%)

Query: 1   YGRKDVVEYLLASGASIHARDDG-------------GLHPLHNACSFGHADVVRLLLEAD 47
               ++V  LLA GAS+ AR  G             G HPL  A   G  ++VRLL+E  
Sbjct: 85  NQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG 144

Query: 48  ANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCY 107
           A+   +D+   T LH    +        +Y                           +  
Sbjct: 145 ADIRAQDSLGNTVLHILILQPNKTFACQMY---------------------------NLL 177

Query: 108 LAHGAD------PFLKNQEGQTPLDL 127
           L++           + N +G TP  L
Sbjct: 178 LSYDGGDHLKSLELVPNNQGLTPFKL 203

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 80.3 bits (199), Expect = 7e-17
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
            ++PL  A        +A+ + L  +G  ++++       +H+AA   +L+    L+   
Sbjct: 3   WESPLLLAAK--ENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAA 60

Query: 765 AKV-----NLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            ++           GQTALH    +     VR LL+  A 
Sbjct: 61  PELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGAS 100

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 80.3 bits (199), Expect = 8e-17
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 20/114 (17%)

Query: 703 YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLA-------------PIHLAA 749
           Y G T LH AV +   +   +V +L+ +GA ++ +    +              P+  AA
Sbjct: 73  YEGQTALHIAVIN---QNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAA 129

Query: 750 DLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDK----TQAVRVLLSHNAD 799
            +G  +++  L+  GA +   D LG T LH            Q   +LLS++  
Sbjct: 130 CVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 26/145 (17%)

Query: 676 LLEACRQGDPSRVKKFLTS---DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGA 732
           LL A ++ D   + K L     +V + +    G+T LH A              L+    
Sbjct: 7   LLLAAKENDVQALSKLLKFEGCEV-HQRGAM-GETALHIAALY---DNLEAAMVLMEAAP 61

Query: 733 -----HLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVD-------------VLG 774
                 +  +  E    +H+A    +++++  LL  GA V+                  G
Sbjct: 62  ELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYG 121

Query: 775 QTALHRTARDDKTQAVRVLLSHNAD 799
           +  L   A     + VR+L+ H AD
Sbjct: 122 EHPLSFAACVGSEEIVRLLIEHGAD 146

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 25/148 (16%), Positives = 45/148 (30%), Gaps = 32/148 (21%)

Query: 4   KDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN-----PNTRDNWNF 58
           + + + L   G  +H R   G   LH A  + + +   +L+EA          +      
Sbjct: 17  QALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQ 76

Query: 59  TPLHEAAAKGKTDVCIGIYFAEH--------SSKSNQYVYGIGGGTGCPM---------- 100
           T LH A      ++                 S+++   V+                    
Sbjct: 77  TALHIAVINQNVNL------VRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAAC 130

Query: 101 --HKDRSCYL-AHGADPFLKNQEGQTPL 125
              ++    L  HGAD   ++  G T L
Sbjct: 131 VGSEEIVRLLIEHGADIRAQDSLGNTVL 158

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 76.5 bits (189), Expect = 2e-15
 Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 13/107 (12%)

Query: 703 YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV----LD 758
           Y G+ PL  A        + IV  LI  GA +  ++      +H+     +        +
Sbjct: 119 YYGEHPLSFAACV---GSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYN 175

Query: 759 TLLRLGAKVN------LVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            LL      +      + +  G T       +      + L+     
Sbjct: 176 LLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 1/70 (1%)

Query: 213 LGLVPLHNACSYGHFE-VTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
           +   PL  A      + ++++L   G  V+       T LH AA    LE   +L+    
Sbjct: 2   IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAP 61

Query: 272 DPTLHNCHSK 281
           +       S+
Sbjct: 62  ELVFEPMTSE 71

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 68.0 bits (167), Expect = 1e-12
 Identities = 24/133 (18%), Positives = 34/133 (25%), Gaps = 33/133 (24%)

Query: 365 REHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPH 424
                N    G   L  A     +       +V L   L+    G D             
Sbjct: 111 HYRPHNLIYYGEHPLSFAACVGSE------EIVRL---LI--EHGAD------------- 146

Query: 425 IVNCRDLDGRHSTPLHFAAGYNRVAVV----EYLLAHGADVHSKD--NATDKWGFTPLHE 478
            +  +D  G   T LH                 LL++    H K      +  G TP   
Sbjct: 147 -IRAQDSLGN--TVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKL 203

Query: 479 AAQKGRTQLSALL 491
           A  +G   +   L
Sbjct: 204 AGVEGNIVMFQHL 216

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 31/125 (24%)

Query: 1079 TPLHEAAAKGKADIV-RLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL-------- 1128
            +PL  AA +     + +LL   G +  ++   G T L +     + + + +L        
Sbjct: 5    SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELV 64

Query: 1129 ---------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNS-----------TP 1167
                      G +AL  A    N+  V+ LL    +++ R                   P
Sbjct: 65   FEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHP 124

Query: 1168 LHLAA 1172
            L  AA
Sbjct: 125  LSFAA 129

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 43.4 bits (103), Expect = 2e-04
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 1128 LRGNSALLDAAKKGNLGRVQKLLTAD--NINCRDAQGRNSTPLHLAA 1172
            +   S LL AAK+ ++  + KLL  +   ++ R A G   T LH+AA
Sbjct: 1    MIWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGE--TALHIAA 45

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  142 bits (361), Expect = 1e-38
 Identities = 39/252 (15%), Positives = 74/252 (29%), Gaps = 66/252 (26%)

Query: 375 GYTALQVA-----GENSKKLLQEPPSVV----DLESQLLEASKGGDMTVVTRLLSSCPHI 425
           G   +  A          +L  E   ++      ++   + +  G   ++          
Sbjct: 12  GQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSN------Y 65

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
           V  +        PLH AA    ++ +   L +   V    N  DK G T L+ A   G  
Sbjct: 66  VAEQAESID--NPLHEAAKRGNLSWLRECLDNRVGV----NGLDKAGSTALYWACHGGHK 119

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGL 545
            +  +L  +                               +N ++  G   T LH AA  
Sbjct: 120 DIVEML-FTQPNIE--------------------------LNQQNKLGD--TALHAAA-- 148

Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINL 598
                    G+ ++ ++L+  GA  ++ ++ K      A         K      A   L
Sbjct: 149 -------WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201

Query: 599 KNTDGKTALDLA 610
            N +     + +
Sbjct: 202 SNAEDYLDDEDS 213

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  121 bits (306), Expect = 3e-31
 Identities = 38/223 (17%), Positives = 69/223 (30%), Gaps = 51/223 (22%)

Query: 375 GYTALQVAGENSKKLLQEPPSV----VDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRD 430
             T         +  L     V      +++ L EA+K G+++ +   L +    VN  D
Sbjct: 45  SDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLD 103

Query: 431 LDGRHSTPLHFAAGYNRVAVVEYLLAH-GADVHSKDNATDKWGFTPLHEAAQKGRTQLSA 489
             G   T L++A       +VE L      ++    N  +K G T LH AA KG   +  
Sbjct: 104 KAGS--TALYWACHGGHKDIVEMLFTQPNIEL----NQQNKLGDTALHAAAWKGYADIVQ 157

Query: 490 LLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLH 549
           LL L+               KG               + R+   +       A       
Sbjct: 158 LL-LA---------------KGAR------------TDLRNIEKK--LAFDMAT------ 181

Query: 550 NACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQH 592
              +     + +      A   +++   +    ++  +    H
Sbjct: 182 ---NAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHHHHH 221

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  118 bits (299), Expect = 3e-30
 Identities = 39/252 (15%), Positives = 64/252 (25%), Gaps = 50/252 (19%)

Query: 536 STPLHFAA--GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAK--ALLQ 591
           S P       G V +  A         + L     ++        T   +  +K    L 
Sbjct: 2   SKPPPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLI 61

Query: 592 HGADINLKNTDGKTALDLAVPCTRAVLSGDHKK--EELLEAARMMGGGLHRYTWPLGTTD 649
               +  +       L  A           +     E L+                    
Sbjct: 62  PSNYVAEQAESIDNPLHEAA-------KRGNLSWLRECLDNR----------------VG 98

Query: 650 IGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSD--VVNFKHPYTGDT 707
           +                  D+     L  AC  G    V+   T     +N ++   GDT
Sbjct: 99  VN---------------GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKL-GDT 142

Query: 708 PLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKV 767
            LH A    +     IV+ L+ KGA  + +N E      +A +     +L       A  
Sbjct: 143 ALHAAA---WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199

Query: 768 NLVDVLGQTALH 779
            L +        
Sbjct: 200 TLSNAEDYLDDE 211

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  103 bits (260), Expect = 5e-25
 Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 32/139 (23%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLL-EADANPNTRDNWNFT 59
            G    +   L +   ++  D  G   L+ AC  GH D+V +L  + +   N ++    T
Sbjct: 83  RGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDT 142

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
            LH AA KG  D+              Q +                  LA GA   L+N 
Sbjct: 143 ALHAAAWKGYADIV-------------QLL------------------LAKGARTDLRNI 171

Query: 120 EGQTPLDLTVAEDVRSLLQ 138
           E +   D+       SLL+
Sbjct: 172 EKKLAFDMATNAACASLLK 190

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 94.6 bits (236), Expect = 7e-22
 Identities = 39/289 (13%), Positives = 76/289 (26%), Gaps = 86/289 (29%)

Query: 206 PSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSL 265
           P  + V  G V +  A         + L     ++  +     T   +  SK R      
Sbjct: 4   PPPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTG---- 59

Query: 266 LLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV 325
            L              +                      L EA ++G+ S +++ L + V
Sbjct: 60  -LIPSNYVAEQAESIDNP---------------------LHEAAKRGNLSWLRECLDNRV 97

Query: 326 -VNFKHPYTGDTPL-----PG-----TLLIDLLSDDKEFITVAEEMQATVREHRDNGQSG 374
            VN      G T L      G      +L               +    +   ++     
Sbjct: 98  GVNGLDKA-GSTALYWACHGGHKDIVEMLFT-------------QPNIEL-NQQNK---L 139

Query: 375 GYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGR 434
           G TAL  A             +V L   LL  +KG                 + R+++ +
Sbjct: 140 GDTALHAAAWKGYA------DIVQL---LL--AKGAR--------------TDLRNIEKK 174

Query: 435 HSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG 483
                  A      ++++      A        ++   +    ++  + 
Sbjct: 175 --LAFDMATNAACASLLKKKQGTDAVR----TLSNAEDYLDDEDSDLEH 217

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 90.4 bits (225), Expect = 2e-20
 Identities = 24/111 (21%), Positives = 36/111 (32%), Gaps = 23/111 (20%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDV 1124
            +    +N  +    T LH AA KG ADIV+LLL  GA    +N +     D+        
Sbjct: 128  QPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDM-------- 179

Query: 1125 SDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGE 1174
                        A        ++K    D      +A+         +  E
Sbjct: 180  ------------ATNAACASLLKKKQGTDAVRTLSNAEDY--LDDEDSDLE 216

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 88.1 bits (219), Expect = 1e-19
 Identities = 24/126 (19%), Positives = 35/126 (27%), Gaps = 32/126 (25%)

Query: 1   YGRKDVVEYLLA-SGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
            G KD+VE L       ++ ++  G   LH A   G+AD+V+LLL   A  + R+     
Sbjct: 116 GGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKL 175

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
               A       +                                       A   L N 
Sbjct: 176 AFDMATNAACASLL-------------------------------KKKQGTDAVRTLSNA 204

Query: 120 EGQTPL 125
           E     
Sbjct: 205 EDYLDD 210

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 86.9 bits (216), Expect = 3e-19
 Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 19/156 (12%)

Query: 1034 VDQLSMAGG-LETGTKKKKKNMYYGTLTPH-NVKHGANVNVADLWKFTPLHEAAAKGKAD 1091
             D+L +  G +   T     N + GT      +     V         PLHEAA +G   
Sbjct: 28   PDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLS 87

Query: 1092 IVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL-------------RGNSALLDA 1137
             +R  L +    +  ++ G+T L      G +D+ ++L              G++AL  A
Sbjct: 88   WLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147

Query: 1138 AKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
            A KG    VQ LL      + R+ + +      +A 
Sbjct: 148  AWKGYADIVQLLLAKGARTDLRNIEKK--LAFDMAT 181

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 82.7 bits (205), Expect = 8e-18
 Identities = 13/68 (19%), Positives = 26/68 (38%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  D+V+ LLA GA    R+         A +   A +++     DA     +  ++  
Sbjct: 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLD 209

Query: 61  LHEAAAKG 68
             ++  + 
Sbjct: 210 DEDSDLEH 217

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 77.3 bits (191), Expect = 7e-16
 Identities = 20/110 (18%), Positives = 32/110 (29%), Gaps = 14/110 (12%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPL---------DLVREGDQDVSDLLR 1129
              +  A    +      L     D         T            L+            
Sbjct: 14   VKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQA-ES 72

Query: 1130 GNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHL 1178
             ++ L +AAK+GNL  +++ L     +N  D  G   T L+ A     H 
Sbjct: 73   IDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGS--TALYWAC-HGGHK 119

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 74.2 bits (183), Expect = 6e-15
 Identities = 21/146 (14%), Positives = 35/146 (23%), Gaps = 42/146 (28%)

Query: 474 TPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQ-TVNARDTA 532
            P  +  + G+                   ++F A    +     +L   +  +      
Sbjct: 3   KPPPKPVKPGQV------------------KVFRALYTFEPRTPDELYIEEGDIIYITDM 44

Query: 533 GRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA------- 585
                               S G        +     V         PLHEAA       
Sbjct: 45  SDT-----------NWWKGTSKGR-----TGLIPSNYVAEQAESIDNPLHEAAKRGNLSW 88

Query: 586 AKALLQHGADINLKNTDGKTALDLAV 611
            +  L +   +N  +  G TAL  A 
Sbjct: 89  LRECLDNRVGVNGLDKAGSTALYWAC 114

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 7/51 (13%), Positives = 17/51 (33%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPL 1114
            +  GA  ++ ++ K      A     A +++      A  +  N +     
Sbjct: 160  LAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDD 210

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 62.3 bits (152), Expect = 9e-11
 Identities = 16/118 (13%), Positives = 31/118 (26%), Gaps = 23/118 (19%)

Query: 18  HARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIY 77
                 G   +  A           L   + +     + + T   +  +KG+T +    Y
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNY 65

Query: 78  FAEHSSKSNQYVYGIGGGTGCPMHKDRSCY----------LAHGADPFLKNQEGQTPL 125
            AE +                P+H   +            L +       ++ G T L
Sbjct: 66  VAEQAES---------IDN--PLH--EAAKRGNLSWLRECLDNRVGVNGLDKAGSTAL 110

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 5/51 (9%), Positives = 11/51 (21%), Gaps = 3/51 (5%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLD 755
                  A  +      ++++      A     N E       +    H  
Sbjct: 173 KKLAFDMATNA---ACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHHHH 220

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 42.2 bits (100), Expect = 5e-04
 Identities = 8/63 (12%), Positives = 16/63 (25%)

Query: 744 PIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIV 803
            +  A         D L      +  +  +  T   +     +T  +          SI 
Sbjct: 15  KVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESID 74

Query: 804 SLL 806
           + L
Sbjct: 75  NPL 77

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  139 bits (352), Expect = 4e-38
 Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 52/183 (28%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPS 496
             L  AA    +  +  LL +  +V    NA + +G T L    + G  +++  L L   
Sbjct: 7   NELASAAARGDLEQLTSLLQNNVNV----NAQNGFGRTALQ-VMKLGNPEIARRL-LL-- 58

Query: 497 AANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGH 556
                        +G +             + +D  G     +H AA           G 
Sbjct: 59  -------------RGAN------------PDLKDRTGF--AVIHDAA---------RAGF 82

Query: 557 YEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGA-DINLKNTDGKTALD 608
            +  + L++  A+VN+ D     PLH AA        + L++H A ++  +N  G TA D
Sbjct: 83  LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACD 142

Query: 609 LAV 611
           LA 
Sbjct: 143 LAR 145

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  122 bits (309), Expect = 3e-32
 Identities = 50/200 (25%), Positives = 68/200 (34%), Gaps = 55/200 (27%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  A+  GD+  +T LL +  ++ N ++  GR  T L          +   LL  GA+  
Sbjct: 9   LASAAARGDLEQLTSLLQNNVNV-NAQNGFGR--TALQVMK-LGNPEIARRLLLRGANP- 63

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              +  D+ GF  +H+AA+ G       L L                   D         
Sbjct: 64  ---DLKDRTGFAVIHDAARAGFLDTLQTL-LE---------------FQAD--------- 95

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGA-NVNVADLWKFTPL 581
              VN  D  G    PLH AA           GH  V E LVKH A NV   +    T  
Sbjct: 96  ---VNIEDNEGN--LPLHLAA---------KEGHLRVVEFLVKHTASNVGHRNHKGDTAC 141

Query: 582 HEAA-------AKALLQHGA 594
             A           +  +GA
Sbjct: 142 DLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  104 bits (262), Expect = 6e-26
 Identities = 42/194 (21%), Positives = 64/194 (32%), Gaps = 70/194 (36%)

Query: 375 GYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGR 434
           G TALQV    + +       +      LL   +G +               + +D  G 
Sbjct: 38  GRTALQVMKLGNPE-------IARR---LL--LRGAN--------------PDLKDRTGF 71

Query: 435 HSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLS 494
               +H AA    +  ++ LL   ADV    N  D  G  PLH AA++G  ++   L + 
Sbjct: 72  --AVIHDAARAGFLDTLQTLLEFQADV----NIEDNEGNLPLHLAAKEGHLRVVEFL-VK 124

Query: 495 PSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSY 554
            +A+N                          V  R+  G   T    A           Y
Sbjct: 125 HTASN--------------------------VGHRNHKGD--TACDLAR---------LY 147

Query: 555 GHYEVTEMLVKHGA 568
           G  EV  ++  +GA
Sbjct: 148 GRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  103 bits (260), Expect = 1e-25
 Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 48/151 (31%)

Query: 468 TDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVN 527
            + WG   L  AA +G  +    L L                   +            VN
Sbjct: 2   AEPWG-NELASAAARGDLEQLTSL-LQ---------------NNVN------------VN 32

Query: 528 ARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-- 585
           A++  GR  T L               G+ E+   L+  GAN ++ D   F  +H+AA  
Sbjct: 33  AQNGFGR--TALQVMK----------LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARA 80

Query: 586 -----AKALLQHGADINLKNTDGKTALDLAV 611
                 + LL+  AD+N+++ +G   L LA 
Sbjct: 81  GFLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 89.4 bits (223), Expect = 9e-21
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 34/126 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  + +  LL +  +++A++  G   L      G+ ++ R LL   ANP+ +D   F  
Sbjct: 15  RGDLEQLTSLLQNNVNVNAQNGFGRTALQVM-KLGNPEIARRLLLRGANPDLKDRTGFAV 73

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQ 119
           +H+AA  G  D        +                           L    AD  +++ 
Sbjct: 74  IHDAARAGFLDT------LQ--------------------------TLLEFQADVNIEDN 101

Query: 120 EGQTPL 125
           EG  PL
Sbjct: 102 EGNLPL 107

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 88.2 bits (220), Expect = 3e-20
 Identities = 25/73 (34%), Positives = 35/73 (47%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  ++   LL  GA+   +D  G   +H+A   G  D ++ LLE  A+ N  DN    P
Sbjct: 47  LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLP 106

Query: 61  LHEAAAKGKTDVC 73
           LH AA +G   V 
Sbjct: 107 LHLAAKEGHLRVV 119

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 87.8 bits (219), Expect = 3e-20
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 24/111 (21%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +  GAN ++ D   F  +H+AA  G  D ++ LL+  AD + ++ +G  PL L       
Sbjct: 57   LLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHL------- 109

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLT--ADNINCRDAQGRNSTPLHLAA 1172
                         AAK+G+L  V+ L+   A N+  R+ +G   T   LA 
Sbjct: 110  -------------AAKEGHLRVVEFLVKHTASNVGHRNHKGD--TACDLAR 145

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 86.3 bits (215), Expect = 1e-19
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 6/124 (4%)

Query: 676 LLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHL 734
           L  A  +GD  ++   L ++V VN ++ + G T L             I   L+ +GA+ 
Sbjct: 9   LASAAARGDLEQLTSLLQNNVNVNAQNGF-GRTALQVMKL----GNPEIARRLLLRGANP 63

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
           + K++   A IH AA  G LD L TLL   A VN+ D  G   LH  A++   + V  L+
Sbjct: 64  DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 123

Query: 795 SHNA 798
            H A
Sbjct: 124 KHTA 127

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 84.7 bits (211), Expect = 4e-19
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 16/114 (14%)

Query: 1072 VADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLL--- 1128
            +A+ W    L  AAA+G  + +  LLQ+  + + +N  G T L +++ G+ +++  L   
Sbjct: 1    MAEPWG-NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLR 59

Query: 1129 ---------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                      G + + DAA+ G L  +Q LL    ++N  D +G    PLHLAA
Sbjct: 60   GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGN--LPLHLAA 111

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 84.0 bits (209), Expect = 8e-19
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
               L  A           + SL++   ++N +N      + +   LG+ ++   LL  G
Sbjct: 5   WGNELASAAAR---GDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRG 60

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A  +L D  G   +H  AR      ++ LL   AD
Sbjct: 61  ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD 95

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 83.2 bits (207), Expect = 1e-18
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADA-NPNTRDNWNFT 59
            G  D ++ LL   A ++  D+ G  PLH A   GH  VV  L++  A N   R++   T
Sbjct: 80  AGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT 139

Query: 60  PLHEAAAKGKTDV 72
               A   G+ +V
Sbjct: 140 ACDLARLYGRNEV 152

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 79.3 bits (197), Expect = 3e-17
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 4/95 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G   +H A           +++L+   A +N ++ E   P+HLAA  GHL V++ L++  
Sbjct: 70  GFAVIHDAA---RAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126

Query: 765 AK-VNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           A  V   +  G TA        + + V ++ ++ A
Sbjct: 127 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 74.7 bits (185), Expect = 1e-15
 Identities = 17/55 (30%), Positives = 26/55 (47%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
            +H+A   G  +  + L++  A+VN  D     PLH AA +  L V   L+   A
Sbjct: 73  VIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 127

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 72.8 bits (180), Expect = 5e-15
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            L      G+ E+   L+  GAN +  D   F  +H+AA    L+    LL   AD
Sbjct: 41  ALQVM-KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD 95

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 71.6 bits (177), Expect = 2e-14
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            L +A + G  E    L++   NVNA + +  T L         E+   LL  GA+P
Sbjct: 8   ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ-VMKLGNPEIARRLLLRGANP 63

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 67.8 bits (167), Expect = 3e-13
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGA-NVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
           PLH A   GH  V E L+K  A NV   +    T    A    R EV SL+ + GA
Sbjct: 106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 67.0 bits (165), Expect = 6e-13
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 21/88 (23%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGA-DPSKKNRDGATPLDLVREGDQ 1122
            ++  A+VN+ D     PLH AA +G   +V  L++H A +   +N  G T  DL      
Sbjct: 90   LEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDL------ 143

Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLL 1150
                          A   G    V  + 
Sbjct: 144  --------------ARLYGRNEVVSLMQ 157

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 62.8 bits (154), Expect = 2e-11
 Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 34/106 (32%)

Query: 21  DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE 80
            +   + L +A + G  + +  LL+ + N N ++ +  T L      G  ++      A 
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ-VMKLGNPEI------AR 54

Query: 81  HSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                                      L   GA+P LK++ G   +
Sbjct: 55  --------------------------RLLLRGANPDLKDRTGFAVI 74

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 55.1 bits (134), Expect = 7e-09
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 1   YGRKDVVEYLLASGAS-IHARDDGGLHPLHNACSFGHADVVRLLLEADA 48
            G   VVE+L+   AS +  R+  G      A  +G  +VV L+    A
Sbjct: 113 EGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 48.1 bits (116), Expect = 2e-06
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 1064 VKHGA-NVNVADLWKFTPLHEAAAKGKADIVRLLLQHGA 1101
            VKH A NV   +    T    A   G+ ++V L+  +GA
Sbjct: 123  VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  139 bits (353), Expect = 3e-37
 Identities = 44/217 (20%), Positives = 65/217 (29%), Gaps = 54/217 (24%)

Query: 406 ASKGGDMTVVTRLLSSCPH--IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHS 463
           A       +   LL           RD  G   TPLH A     +A V  L       H 
Sbjct: 52  AVITNQPEIAEALLG---AGCDPELRDFRGN--TPLHLACEQGCLASVGVLTQSCTTPHL 106

Query: 464 KD--NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLV 521
                AT+  G T LH A+  G   +  LL +S                G D        
Sbjct: 107 HSILKATNYNGHTCLHLASIHGYLGIVELL-VS---------------LGAD-------- 142

Query: 522 NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPL 581
               VNA++    + T LH A             + ++  +L+K GA+VN      ++P 
Sbjct: 143 ----VNAQEPCNGR-TALHLAV---------DLQNPDLVSLLLKCGADVNRVTYQGYSPY 188

Query: 582 HEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
                       + L Q   +      + +       
Sbjct: 189 QLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDT 225

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  129 bits (327), Expect = 7e-34
 Identities = 51/261 (19%), Positives = 82/261 (31%), Gaps = 50/261 (19%)

Query: 537 TPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKAL 589
           + LH A       +       EV   +    A +N  +  + TPLH A        A+AL
Sbjct: 10  SFLHLAI-----IHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64

Query: 590 LQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK--EELLEAARMMGGGLHRYTWPLGT 647
           L  G D  L++  G T L LA                  L ++                 
Sbjct: 65  LGAGCDPELRDFRGNTPLHLAC-------EQGCLASVGVLTQS----------------- 100

Query: 648 TDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGD 706
                   C    L  + +  +     CL  A   G    V+  ++    VN + P  G 
Sbjct: 101 --------CTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGR 152

Query: 707 TPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAK 766
           T LH AV     +   +V  L++ GA +N    +  +P  L        +   L +L  +
Sbjct: 153 TALHLAV---DLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 209

Query: 767 VNLVDVLGQTALHRTARDDKT 787
              +    +         + T
Sbjct: 210 NLQMLPESEDEESYDTESEFT 230

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  118 bits (297), Expect = 7e-30
 Identities = 57/280 (20%), Positives = 86/280 (30%), Gaps = 92/280 (32%)

Query: 217 PLHNACSYGH----FEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            LH A  +       EV   +    A +N  +  Q TPLH A   ++ E+   LL  G D
Sbjct: 11  FLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD 70

Query: 273 PTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPY 332
           P L +    + +                  H    AC QG             V      
Sbjct: 71  PELRDFRGNTPL------------------HL---ACEQGCL---------ASVGV---- 96

Query: 333 TGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQE 392
                        L                ++ +  +     G+T L +A  +       
Sbjct: 97  -------------LTQSC------TTPHLHSILKATNY---NGHTCLHLASIHGYL---- 130

Query: 393 PPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRD-LDGRHSTPLHFAAGYNRVAVV 451
              +V+L   L+  S G D              VN ++  +GR  T LH A       +V
Sbjct: 131 --GIVEL---LV--SLGAD--------------VNAQEPCNGR--TALHLAVDLQNPDLV 167

Query: 452 EYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
             LL  GADV    N     G++P      +  T++   L
Sbjct: 168 SLLLKCGADV----NRVTYQGYSPYQLTWGRPSTRIQQQL 203

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  106 bits (267), Expect = 8e-26
 Identities = 54/244 (22%), Positives = 77/244 (31%), Gaps = 65/244 (26%)

Query: 579 TPLHEAA-----------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK--E 625
           + LH A             + +    A +N +N   +T L L      AV++    +  E
Sbjct: 10  SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHL------AVITN-QPEIAE 62

Query: 626 ELLEA-ARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGD 684
            LL A                   D                 ++D      L  AC QG 
Sbjct: 63  ALLGAGC-----------------DP---------------ELRDFRGNTPLHLACEQGC 90

Query: 685 PSRVKKFLTSDVVNFKHP-------YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEK 737
                  LT                Y G T LH A          IVE L+  GA +N +
Sbjct: 91  L-ASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH---GYLGIVELLVSLGADVNAQ 146

Query: 738 NKEL-LAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSH 796
                   +HLA DL + D++  LL+ GA VN V   G +    T     T+  + L   
Sbjct: 147 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQL 206

Query: 797 NADT 800
             + 
Sbjct: 207 TLEN 210

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 95.3 bits (238), Expect = 6e-22
 Identities = 29/159 (18%), Positives = 48/159 (30%), Gaps = 50/159 (31%)

Query: 467 ATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLV-NPQT 525
              + G + LH A       L+  +                         ++++  +   
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEV-------------------------IRQVKGDLAF 37

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
           +N ++   +  TPLH A               E+ E L+  G +  + D    TPLH A 
Sbjct: 38  LNFQNNLQQ--TPLHLAV---------ITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC 86

Query: 586 -------AKALLQHGAD------INLKNTDGKTALDLAV 611
                     L Q          +   N +G T L LA 
Sbjct: 87  EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 125

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 93.8 bits (234), Expect = 2e-21
 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 23/130 (17%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
                A +N  +  + TPLH A    + +I   LL  G DP  ++  G TPL L   +G  
Sbjct: 32   KGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCL 91

Query: 1123 DVSDLL------------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQ-G 1162
                +L                   G++ L  A+  G LG V+ L++   ++N ++   G
Sbjct: 92   ASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNG 151

Query: 1163 RNSTPLHLAA 1172
            R  T LHLA 
Sbjct: 152  R--TALHLAV 159

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 92.2 bits (230), Expect = 7e-21
 Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 705 GDTPLHCAVTSPYPKRKA-IVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
           GD+ LH A+          ++  +    A LN +N     P+HLA      ++ + LL  
Sbjct: 8   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 67

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLL 806
           G    L D  G T LH         +V VL        + S+L
Sbjct: 68  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSIL 110

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 85.7 bits (213), Expect = 1e-18
 Identities = 22/140 (15%), Positives = 42/140 (30%), Gaps = 32/140 (22%)

Query: 1   YGRKDVVEYLLASGASIHARDDG-GLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
           +G   +VE L++ GA ++A++   G   LH A    + D+V LLL+  A+ N      ++
Sbjct: 127 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 186

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
           P      +  T +                                        +      
Sbjct: 187 PYQLTWGRPSTRIQ-------------------------------QQLGQLTLENLQMLP 215

Query: 120 EGQTPLDLTVAEDVRSLLQD 139
           E +         +     +D
Sbjct: 216 ESEDEESYDTESEFTEFTED 235

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 83.0 bits (206), Expect = 1e-17
 Identities = 34/151 (22%), Positives = 50/151 (33%), Gaps = 35/151 (23%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANP------NTRD 54
             + ++ E LL +G     RD  G  PLH AC  G    V +L ++   P         +
Sbjct: 55  TNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN 114

Query: 55  NWNFTPLHEAAAKGKTDVCIGIYFAEH--------SSKSNQYVYGIGGGTGCPMH----- 101
               T LH A+  G   +       E         +++         G T   +H     
Sbjct: 115 YNGHTCLHLASIHGYLGI------VELLVSLGADVNAQEPCN-----GRT--ALHLAVDL 161

Query: 102 --KDRSCYL-AHGADPFLKNQEGQTPLDLTV 129
              D    L   GAD      +G +P  LT 
Sbjct: 162 QNPDLVSLLLKCGADVNRVTYQGYSPYQLTW 192

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 82.6 bits (205), Expect = 1e-17
 Identities = 24/128 (18%), Positives = 36/128 (28%), Gaps = 37/128 (28%)

Query: 4   KDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHE 63
            +V+  +    A ++ +++    PLH A      ++   LL A  +P  RD    TPLH 
Sbjct: 25  MEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL 84

Query: 64  AAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFL------K 117
           A  +G                                             P L       
Sbjct: 85  ACEQGCLASV-------------------------------GVLTQSCTTPHLHSILKAT 113

Query: 118 NQEGQTPL 125
           N  G T L
Sbjct: 114 NYNGHTCL 121

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 74.9 bits (185), Expect = 5e-15
 Identities = 27/118 (22%), Positives = 38/118 (32%), Gaps = 30/118 (25%)

Query: 1064 VKHGAN------VNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKK-NRDGATPLDL 1116
             +          +   +    T LH A+  G   IV LL+  GAD + +   +G T L L
Sbjct: 98   TQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHL 157

Query: 1117 VREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAG 1173
                                A    N   V  LL    ++N    QG   +P  L  G
Sbjct: 158  --------------------AVDLQNPDLVSLLLKCGADVNRVTYQGY--SPYQLTWG 193

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 74.1 bits (183), Expect = 9e-15
 Identities = 12/71 (16%), Positives = 25/71 (35%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
            LH A    + ++  +L+K GA+VN +    ++P      +    +   L     +    
Sbjct: 154 ALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQM 213

Query: 277 NCHSKSAIDVA 287
              S+      
Sbjct: 214 LPESEDEESYD 224

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 72.2 bits (178), Expect = 4e-14
 Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 26/118 (22%)

Query: 1079 TPLHEAAAKG----KADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL----- 1128
            + LH A          +++R +    A  + +N    TPL L V     ++++ L     
Sbjct: 10   SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 69

Query: 1129 -------RGNSALLDAAKKGNLGRVQKLL-------TADNINCRDAQGRNSTPLHLAA 1172
                   RGN+ L  A ++G L  V  L            +   +  G   T LHLA+
Sbjct: 70   DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGH--TCLHLAS 125

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 71.8 bits (177), Expect = 7e-14
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMD-LWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G   LH A  +G+  + E+L+  GA+VNA +     T LH A      ++ SLLL  GAD
Sbjct: 117 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD 176

Query: 273 P 273
            
Sbjct: 177 V 177

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 70.7 bits (174), Expect = 2e-13
 Identities = 23/112 (20%), Positives = 35/112 (31%), Gaps = 26/112 (23%)

Query: 1064 VKHGANVNVADLWK-FTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQ 1122
            V  GA+VN  +     T LH A      D+V LLL+ GAD ++    G +P  L      
Sbjct: 137  VSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL------ 190

Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLL--TADNINCRDAQGRNSTPLHLAA 1172
                             + +    Q+L   T +       +           
Sbjct: 191  --------------TWGRPSTRIQQQLGQLTLE-NLQMLPESE--DEESYDT 225

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 67.2 bits (165), Expect = 2e-12
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 6/65 (9%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGAN------VNAMDLWQFTPLHEAASKSRLEVCSLLL 267
           G  PLH AC  G      +L ++         + A +    T LH A+    L +  LL+
Sbjct: 78  GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLV 137

Query: 268 SEGAD 272
           S GAD
Sbjct: 138 SLGAD 142

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 61.0 bits (149), Expect = 3e-10
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 35/112 (31%)

Query: 18  HARDDGGLHPLHNACSFGH----ADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVC 73
               + G   LH A          +V+R +    A  N ++N   TPLH A    + ++ 
Sbjct: 2   QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEI- 60

Query: 74  IGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                AE                           L  G DP L++  G TPL
Sbjct: 61  -----AE-------------------------ALLGAGCDPELRDFRGNTPL 82

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 736 EKNKELLAPIHLAADLGH----LDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVR 791
           +  ++  + +HLA         ++V+  +    A +N  + L QT LH     ++ +   
Sbjct: 3   QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAE 62

Query: 792 VLLSHNAD 799
            LL    D
Sbjct: 63  ALLGAGCD 70

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 47.9 bits (115), Expect = 6e-06
 Identities = 4/46 (8%), Positives = 7/46 (15%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEV 262
           P           + + L +       M                 E 
Sbjct: 187 PYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEF 232

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  139 bits (352), Expect = 4e-37
 Identities = 56/341 (16%), Positives = 88/341 (25%), Gaps = 113/341 (33%)

Query: 424 HIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG 483
            I +    +G                         ADV S+         TP   AA+K 
Sbjct: 6   IIGSRTAGEGA--MEYLIEWKDGHSPSWVPSSYIAADVVSE-------YETPWWTAARKA 56

Query: 484 RTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAA 543
             Q  + L                  +  D            V+A D  GR  T L F A
Sbjct: 57  DEQALSQL-----------------LEDRD------------VDAVDENGR--TALLFVA 85

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADL-WKFTPLHEAA-------AKALLQHGAD 595
                      G  +   +L + GA+++  D+    T LH AA        +AL++ GAD
Sbjct: 86  ---------GLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 136

Query: 596 INLKNTDGKTALDLAVPCTRAVLSGDHKK--EELLEAARMMGGGLHRYTWPLGTTDIGWC 653
           I +++  G TAL+LA                   ++  R                 IG  
Sbjct: 137 IEVEDERGLTALELAR-------EILKTTPKGNPMQFGR----------------RIG-- 171

Query: 654 SCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAV 713
                        ++       +LE          +       +  K    G    +   
Sbjct: 172 -------------LEKVIN---VLEGQVFEYAEVDE-------IVEKRGK-GKDVEYLVR 207

Query: 714 TSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHL 754
                             A    K+ E    +  A     +
Sbjct: 208 WK---DGGDCEWVKGVHVAEDVAKDYE--DGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  113 bits (286), Expect = 3e-28
 Identities = 37/192 (19%), Positives = 61/192 (31%), Gaps = 33/192 (17%)

Query: 403 LLEASKGGDMTVVTRLLSSCPH--IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD 460
           LL  +  G    V  L         ++ RD+ G   T LH AAGY R  VVE L+  GAD
Sbjct: 81  LLFVAGLGSDKCVRLLAE---AGADLDHRDMRGG-LTALHMAAGYVRPEVVEALVELGAD 136

Query: 461 VHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSA--ANDPLRELFEACKGGDLTKVK 518
           +       D+ G T L  A +  +T       +        + +  + E          +
Sbjct: 137 I----EVEDERGLTALELAREILKTTPKGNP-MQFGRRIGLEKVINVLEGQVFEYAEVDE 191

Query: 519 KLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKF 578
                  +  +   G+     +                 +   +   H A     D    
Sbjct: 192 -------IVEKRGKGK--DVEYLVR---------WKDGGDCEWVKGVHVAEDVAKD--YE 231

Query: 579 TPLHEAAAKALL 590
             L  A A++++
Sbjct: 232 DGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 96.1 bits (240), Expect = 4e-22
 Identities = 44/287 (15%), Positives = 74/287 (25%), Gaps = 75/287 (26%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G +        GH           A+V +      TP   AA K+  +  S LL E  D 
Sbjct: 15  GAMEYLIEWKDGHSPSWVPSSYIAADVVSEY---ETPWWTAARKADEQALSQLL-EDRDV 70

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTS---DVVNFKH 330
              + + ++A                     LL     G    V+  L     D+ + + 
Sbjct: 71  DAVDENGRTA---------------------LLFVAGLGSDKCVR-LLAEAGADL-DHRD 107

Query: 331 PYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVR---------EHRDNGQSGGYTALQV 381
              G T L               +         V          E  D     G TAL++
Sbjct: 108 MRGGLTAL--------------HMAAGYVRPEVVEALVELGADIEVEDER---GLTALEL 150

Query: 382 AGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSC----PHIVNCRDLDGRHST 437
           A E  K       +        ++  +   +  V  +L         +    +  G+   
Sbjct: 151 AREILKT------TPKGN---PMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKD 201

Query: 438 PLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGR 484
             +     +          H A+  +KD          L  A  +  
Sbjct: 202 VEYLVRWKDGGDCEWVKGVHVAEDVAKDYE------DGLEYAVAESV 242

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 91.9 bits (229), Expect = 9e-21
 Identities = 43/283 (15%), Positives = 76/283 (26%), Gaps = 86/283 (30%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDG 603
           G V              E L++                H  +        AD+    ++ 
Sbjct: 1   GEVNKIIGSRTAGEGAMEYLIEWKDG------------HSPSWVPSSYIAADVV---SEY 45

Query: 604 KTALDLAVPCTRAVLSGDHKK--EELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMEL 661
           +T    A            ++   +LLE                   D+           
Sbjct: 46  ETPWWTAA-------RKADEQALSQLLEDR-----------------DV----------- 70

Query: 662 MFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTS---DVVNFKHPYTGDTPLHCAVTSPYP 718
                  DE     LL     G    V+  L     D+ + +    G T LH A      
Sbjct: 71  ----DAVDENGRTALLFVAGLGSDKCVR-LLAEAGADL-DHRDMRGGLTALHMAAGY--- 121

Query: 719 KRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVL----- 773
            R  +VE+L+  GA +  +++  L  + LA ++         ++ G ++ L  V+     
Sbjct: 122 VRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEG 181

Query: 774 -----------------GQTALHRTARDDKTQAVRVLLSHNAD 799
                            G+   +     D      V   H A+
Sbjct: 182 QVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 224

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 91.9 bits (229), Expect = 9e-21
 Identities = 29/128 (22%), Positives = 43/128 (33%), Gaps = 33/128 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD-NWNFT 59
              +  +  LL     + A D+ G   L      G    VRLL EA A+ + RD     T
Sbjct: 55  KADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLT 113

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
            LH AA   + +V                                   +  GAD  ++++
Sbjct: 114 ALHMAAGYVRPEVV-------------------------------EALVELGADIEVEDE 142

Query: 120 EGQTPLDL 127
            G T L+L
Sbjct: 143 RGLTALEL 150

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 88.8 bits (221), Expect = 1e-19
 Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 2/116 (1%)

Query: 1064 VKHGANVNVADL-WKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGD 1121
             + GA+++  D+    T LH AA   + ++V  L++ GAD   ++  G T L+L      
Sbjct: 97   AEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK 156

Query: 1122 QDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRH 1177
                         +   K  N+   Q    A+     + +G+     +L   +   
Sbjct: 157  TTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGG 212

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 88.8 bits (221), Expect = 1e-19
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 1/73 (1%)

Query: 1   YGRKDVVEYLLASGASIHARD-DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
            G    V  L  +GA +  RD  GGL  LH A  +   +VV  L+E  A+    D    T
Sbjct: 87  LGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLT 146

Query: 60  PLHEAAAKGKTDV 72
            L  A    KT  
Sbjct: 147 ALELAREILKTTP 159

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 85.3 bits (212), Expect = 2e-18
 Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 9/170 (5%)

Query: 676 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLN 735
              A R+ D   + + L    V+      G T L              V  L   GA L+
Sbjct: 49  WWTAARKADEQALSQLLEDRDVDAVDEN-GRTALLFVAGL---GSDKCVRLLAEAGADLD 104

Query: 736 EKNKEL-LAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
            ++    L  +H+AA     +V++ L+ LGA + + D  G TAL       KT      +
Sbjct: 105 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 164

Query: 795 SHNAD---TSIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHED 841
                     ++++L          +  ++E   + +    ++   +  D
Sbjct: 165 QFGRRIGLEKVINVLEG-QVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGD 213

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 81.5 bits (202), Expect = 4e-17
 Identities = 29/122 (23%), Positives = 39/122 (31%), Gaps = 25/122 (20%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKN-RDGATPLDLVREGDQDV 1124
               +V+  D    T L   A  G    VRLL + GAD   ++ R G T            
Sbjct: 66   EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTA----------- 114

Query: 1125 SDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCRV 1183
                     L  AA       V+ L+    +I   D +G   T L LA  E         
Sbjct: 115  ---------LHMAAGYVRPEVVEALVELGADIEVEDERGL--TALELAR-EILKTTPKGN 162

Query: 1184 TL 1185
             +
Sbjct: 163  PM 164

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 77.3 bits (191), Expect = 9e-16
 Identities = 19/118 (16%), Positives = 31/118 (26%), Gaps = 11/118 (9%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            V+ GA++ V D    T L  A    K       +Q G     +       L+       +
Sbjct: 131  VELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINV--LEGQVFEYAE 188

Query: 1124 VSDLL----RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKR 1176
            V +++    +G         K                  +D        L  A  E  
Sbjct: 189  VDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKD----YEDGLEYAVAESV 242

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 69.6 bits (171), Expect = 5e-13
 Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 3/72 (4%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           Y R +VVE L+  GA I   D+ GL  L  A            ++               
Sbjct: 121 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKV---IN 177

Query: 61  LHEAAAKGKTDV 72
           + E       +V
Sbjct: 178 VLEGQVFEYAEV 189

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 68.8 bits (169), Expect = 8e-13
 Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 17/109 (15%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL--------- 1128
                     G +          AD      +  TP     R+ D+     L         
Sbjct: 17   MEYLIEWKDGHSPSWVPSSYIAAD---VVSEYETPWWTAARKADEQALSQLLEDRDVDAV 73

Query: 1129 --RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGE 1174
               G +ALL  A  G+   V+ L  A  +++ RD +G   T LH+AAG 
Sbjct: 74   DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG-GLTALHMAAGY 121

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 53.8 bits (130), Expect = 7e-08
 Identities = 14/105 (13%), Positives = 22/105 (20%), Gaps = 36/105 (34%)

Query: 21  DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE 80
            +G +         GH+          A+  +      TP   AA K             
Sbjct: 13  GEGAME-YLIEWKDGHSPSWVPSSYIAADVVSEYE---TPWWTAARKADEQA------LS 62

Query: 81  HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                                      L    D    ++ G+T L
Sbjct: 63  --------------------------QLLEDRDVDAVDENGRTAL 81

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 51.1 bits (123), Expect = 7e-07
 Identities = 8/90 (8%), Positives = 15/90 (16%), Gaps = 24/90 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLH----------------------PLHNACSFGHAD 38
             +       +  G  I       +                         +        D
Sbjct: 154 ILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGD 213

Query: 39  VVRLLLEADANPNTRDNWNFTPLHEAAAKG 68
              +     A    +D      L  A A+ 
Sbjct: 214 CEWVKGVHVAEDVAKD--YEDGLEYAVAES 241

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 45.7 bits (109), Expect = 4e-05
 Identities = 7/47 (14%), Positives = 13/47 (27%), Gaps = 2/47 (4%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRL 260
           G    +        +   +     A   A D      L  A ++S +
Sbjct: 199 GKDVEYLVRWKDGGDCEWVKGVHVAEDVAKD--YEDGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 42.6 bits (101), Expect = 3e-04
 Identities = 5/50 (10%), Positives = 11/50 (22%)

Query: 1062 HNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGA 1111
                    +           +    K   D   +   H A+   K+ +  
Sbjct: 184  FEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDG 233

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  137 bits (348), Expect = 1e-36
 Identities = 52/222 (23%), Positives = 79/222 (35%), Gaps = 58/222 (26%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHI--VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH--G 458
           L  +       + + LLS   ++   +  D  G   TP H A     + VV+ L      
Sbjct: 40  LHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGW--TPFHIACSVGNLEVVKSLYDRPLK 97

Query: 459 ADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVK 518
            D+    N     G T LH A  K   ++S  L +                 G       
Sbjct: 98  PDL----NKITNQGVTCLHLAVGKKWFEVSQFL-IE---------------NGAS----- 132

Query: 519 KLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGAN-VNVADLWK 577
                  V  +D   +   PLH AA         S G  ++ E+L   G + VN  D   
Sbjct: 133 -------VRIKDKFNQ--IPLHRAA---------SVGSLKLIELLCGLGKSAVNWQDKQG 174

Query: 578 FTPLHEAA-------AKALL-QHGADINLKNTDGKTALDLAV 611
           +TPL  A        A  L+ ++GA+ +L +  G  A D+A+
Sbjct: 175 WTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 216

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  131 bits (332), Expect = 1e-34
 Identities = 41/186 (22%), Positives = 65/186 (34%), Gaps = 50/186 (26%)

Query: 436 STPLHFAAGYNRVA-VVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLS 494
           + PLH A   N    V E L +  + +       D+ G  PLH +      ++++ L LS
Sbjct: 3   NYPLHQACMENEFFKVQELLHSKPSLL----LQKDQDGRIPLHWSVSFQAHEITSFL-LS 57

Query: 495 PSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSY 554
                          K  +            VN  D             G  P H ACS 
Sbjct: 58  ---------------KMEN------------VNLDDYPDDS--------GWTPFHIACSV 82

Query: 555 GHYEVTEMLVKH--GANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKT 605
           G+ EV + L       ++N       T LH A        ++ L+++GA + +K+   + 
Sbjct: 83  GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQI 142

Query: 606 ALDLAV 611
            L  A 
Sbjct: 143 PLHRAA 148

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  124 bits (314), Expect = 3e-32
 Identities = 47/196 (23%), Positives = 65/196 (33%), Gaps = 50/196 (25%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHI-VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADV 461
              A   G++ VV  L        +N     G   T LH A G     V ++L+ +GA V
Sbjct: 76  FHIACSVGNLEVVKSLYDRPLKPDLNKITNQGV--TCLHLAVGKKWFEVSQFLIENGASV 133

Query: 462 HSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLV 521
                  DK+   PLH AA  G  +L  LL      +                       
Sbjct: 134 ----RIKDKFNQIPLHRAASVGSLKLIELL-CGLGKSA---------------------- 166

Query: 522 NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLV-KHGANVNVADLWKFTP 580
               VN +D  G   TPL  A          + GH +   +LV K+GA  ++ D      
Sbjct: 167 ----VNWQDKQGW--TPLFHAL---------AEGHGDAAVLLVEKYGAEYDLVDNKGAKA 211

Query: 581 LHEAA----AKALLQH 592
              A      K  L +
Sbjct: 212 EDVALNEQVKKFFLNN 227

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 97.1 bits (243), Expect = 1e-22
 Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 35/140 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANP-NTRDNWNFT 59
               +V ++L+ +GAS+  +D     PLH A S G   ++ LL     +  N +D   +T
Sbjct: 117 KKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT 176

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL--AHGADPFLK 117
           PL  A A+G  D       A                            L   +GA+  L 
Sbjct: 177 PLFHALAEGHGDA------AV--------------------------LLVEKYGAEYDLV 204

Query: 118 NQEGQTPLDLTVAEDVRSLL 137
           + +G    D+ + E V+   
Sbjct: 205 DNKGAKAEDVALNEQVKKFF 224

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 95.6 bits (239), Expect = 3e-22
 Identities = 35/152 (23%), Positives = 49/152 (32%), Gaps = 50/152 (32%)

Query: 472 GFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT 531
              PLH+A  +        L  S               K               +  +D 
Sbjct: 2   SNYPLHQACMENEFFKVQELLHS---------------KPSL------------LLQKDQ 34

Query: 532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADL---WKFTPLHEAA--- 585
            GR   PLH++          S+  +E+T  L+    NVN+ D      +TP H A    
Sbjct: 35  DGR--IPLHWSV---------SFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVG 83

Query: 586 ----AKALLQH--GADINLKNTDGKTALDLAV 611
                K+L       D+N     G T L LAV
Sbjct: 84  NLEVVKSLYDRPLKPDLNKITNQGVTCLHLAV 115

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 89.4 bits (223), Expect = 5e-20
 Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 18/122 (14%)

Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVS 1125
              ++N       T LH A  K   ++ + L+++GA    K++    PL      G   + 
Sbjct: 97   KPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLI 156

Query: 1126 DLL-------------RGNSALLDAAKKGNLGRVQKLLTAD--NINCRDAQGRNSTPLHL 1170
            +LL             +G + L  A  +G+      L+       +  D +G       +
Sbjct: 157  ELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA--KAEDV 214

Query: 1171 AA 1172
            A 
Sbjct: 215  AL 216

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 87.1 bits (217), Expect = 3e-19
 Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 21/128 (16%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADP---SKKNRDGATPLDL-VRE 1119
                + +   D     PLH + +    +I   LL    +       +  G TP  +    
Sbjct: 23   HSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82

Query: 1120 GDQDVSDLL--------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRN 1164
            G+ +V   L              +G + L  A  K      Q L+    ++  +D   + 
Sbjct: 83   GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQ- 141

Query: 1165 STPLHLAA 1172
              PLH AA
Sbjct: 142  -IPLHRAA 148

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 86.7 bits (216), Expect = 4e-19
 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 16/137 (11%)

Query: 1   YGRKD-VVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTR---DNW 56
                 V E L +  + +  +D  G  PLH + SF   ++   LL    N N     D+ 
Sbjct: 12  ENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDS 71

Query: 57  NFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH-------KDRSCYL- 108
            +TP H A + G  +V       +   K +       G T   +H        + S +L 
Sbjct: 72  GWTPFHIACSVGNLEVV--KSLYDRPLKPDLNKITNQGVT--CLHLAVGKKWFEVSQFLI 127

Query: 109 AHGADPFLKNQEGQTPL 125
            +GA   +K++  Q PL
Sbjct: 128 ENGASVRIKDKFNQIPL 144

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 84.4 bits (210), Expect = 3e-18
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 11/131 (8%)

Query: 676 LLEACRQGDPSRVKKFLTSD--VVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAH 733
           L +AC + +  +V++ L S   ++  K    G  PLH +V+    +   I   L+ K  +
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQD-GRIPLHWSVSF---QAHEITSFLLSKMEN 61

Query: 734 LN---EKNKELLAPIHLAADLGHLDVLDTLL--RLGAKVNLVDVLGQTALHRTARDDKTQ 788
           +N     +     P H+A  +G+L+V+ +L    L   +N +   G T LH        +
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121

Query: 789 AVRVLLSHNAD 799
             + L+ + A 
Sbjct: 122 VSQFLIENGAS 132

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 82.9 bits (206), Expect = 8e-18
 Identities = 52/263 (19%), Positives = 78/263 (29%), Gaps = 54/263 (20%)

Query: 213 LGLVPLHNACSYGHF-EVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
           +   PLH AC    F +V E+L    + +   D     PLH + S    E+ S LLS+  
Sbjct: 1   MSNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKME 60

Query: 272 DPTLHNCHSKSAIDVAPTRELQQRLSNEFKGH-CLLEACRQGDPSRVKKFLTSDV---VN 327
           +  L +    S                   G      AC  G+   VK      +   +N
Sbjct: 61  NVNLDDYPDDS-------------------GWTPFHIACSVGNLEVVKSLYDRPLKPDLN 101

Query: 328 FKHPYTGDTPLPGTLLIDLLSDDKEFITVAE---EMQATVREHRDNGQSGGYTALQVAGE 384
                 G T     L + +     E   V++   E  A+VR      Q      L  A  
Sbjct: 102 KIT-NQGVTC----LHLAVGKKWFE---VSQFLIENGASVRIKDKFNQ----IPLHRAAS 149

Query: 385 NSKK-----LLQEPPSVVDLESQ-----LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGR 434
                    L     S V+ + +     L  A   G       L+       +  D  G 
Sbjct: 150 VGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA 209

Query: 435 HSTPLHFAAGYNRVAVVEYLLAH 457
                  A       V ++ L +
Sbjct: 210 --KAEDVALNEQ---VKKFFLNN 227

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 81.7 bits (203), Expect = 2e-17
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 5/96 (5%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRK--GAHLNEKNKELLAPIHLAADLGHLDVLDTLLR 762
           G TP H A          +V+SL  +     LN+   + +  +HLA      +V   L+ 
Sbjct: 72  GWTPFHIAC---SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIE 128

Query: 763 LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
            GA V + D   Q  LHR A     + + +L     
Sbjct: 129 NGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGK 164

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 79.0 bits (196), Expect = 2e-16
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 5/101 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
            + PLH A      +   + E L  K + L +K+++   P+H +      ++   LL   
Sbjct: 2   SNYPLHQA--CMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 59

Query: 765 AKVNLVDVL---GQTALHRTARDDKTQAVRVLLSHNADTSI 802
             VNL D     G T  H        + V+ L        +
Sbjct: 60  ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL 100

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 76.7 bits (190), Expect = 1e-15
 Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 22/115 (19%)

Query: 1078 FTPLHEAAAKG-KADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL------- 1128
              PLH+A  +     +  LL    +   +K++DG  PL   V     +++  L       
Sbjct: 3    NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 62

Query: 1129 --------RGNSALLDAAKKGNLGRVQKLLTAD---NINCRDAQGRNSTPLHLAA 1172
                     G +    A   GNL  V+ L       ++N    QG   T LHLA 
Sbjct: 63   NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGV--TCLHLAV 115

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 73.6 bits (182), Expect = 1e-14
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 8/94 (8%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKG-AHLNEKNKELLAPIHLAADLGHLDVLDTLL-R 762
              PLH A +        ++E L   G + +N ++K+   P+  A   GH D    L+ +
Sbjct: 140 NQIPLHRAASV---GSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196

Query: 763 LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSH 796
            GA+ +LVD  G  A      +      +  L++
Sbjct: 197 YGAEYDLVDNKGAKAEDVALNEQ---VKKFFLNN 227

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 57.1 bits (139), Expect = 5e-09
 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 27 PLHNACSFGHAD-VVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDV 72
          PLH AC       V  LL    +    +D     PLH + +    ++
Sbjct: 5  PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEI 51

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 42.8 bits (102), Expect = 3e-04
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 1130 GNSALLDAAKKGNLGRVQKLLTAD--NINCRDAQGRNSTPLHLAA 1172
             N  L  A  +    +VQ+LL +    +  +D  GR   PLH + 
Sbjct: 2    SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGR--IPLHWSV 44

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  134 bits (341), Expect = 1e-36
 Identities = 45/184 (24%), Positives = 70/184 (38%), Gaps = 51/184 (27%)

Query: 434 RHSTPLHFAAGYNRVAVVEYLL-AHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLP 492
           R    L  AA    V  V  LL           +A +++G T L      G T ++  L 
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHP----DALNRFGKTALQ-VMMFGSTAIALEL- 54

Query: 493 LSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNAC 552
           L                +G               N +DT+G   +P+H AA         
Sbjct: 55  LK---------------QGAS------------PNVQDTSGT--SPVHDAA--------- 76

Query: 553 SYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAK------ALLQHGADINLKNTDGKTA 606
             G  +  ++LV+HGA+VNV D     P+H A  +      + L   +D++ ++  G T 
Sbjct: 77  RTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTP 136

Query: 607 LDLA 610
           L+LA
Sbjct: 137 LELA 140

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  132 bits (334), Expect = 9e-36
 Identities = 45/197 (22%), Positives = 63/197 (31%), Gaps = 54/197 (27%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  A+  GD+  V RLL       +  +  G+  T L     +   A+   LL  GA   
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGK--TALQVMM-FGSTAIALELLKQGASP- 61

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              N  D  G +P+H+AA+ G      +L +                 G D         
Sbjct: 62  ---NVQDTSGTSPVHDAARTGFLDTLKVL-VE---------------HGAD--------- 93

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              VN  D  G    P+H A            GH  V   L    ++++  D    TPL 
Sbjct: 94  ---VNVPDGTGA--LPIHLAV---------QEGHTAVVSFLAAE-SDLHRRDARGLTPLE 138

Query: 583 EAA-------AKALLQH 592
            A           L  H
Sbjct: 139 LALQRGAQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  102 bits (257), Expect = 2e-25
 Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 32/127 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +G   +   LL  GAS + +D  G  P+H+A   G  D +++L+E  A+ N  D     P
Sbjct: 45  FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALP 104

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           +H A  +G T V                                  +LA  +D   ++  
Sbjct: 105 IHLAVQEGHTAV------VS--------------------------FLAAESDLHRRDAR 132

Query: 121 GQTPLDL 127
           G TPL+L
Sbjct: 133 GLTPLEL 139

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 92.9 bits (232), Expect = 4e-22
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 16/121 (13%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQD 1123
            +   + +  + +  T L      G   I   LL+ GA P+ ++  G +P+    R G  D
Sbjct: 24   RELVHPDALNRFGKTALQ-VMMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD 82

Query: 1124 VSDLL------------RGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLA 1171
               +L             G   +  A ++G+   V  L    +++ RDA+G   TPL LA
Sbjct: 83   TLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGL--TPLELA 140

Query: 1172 A 1172
             
Sbjct: 141  L 141

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 89.4 bits (223), Expect = 9e-21
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 8/126 (6%)

Query: 676 LLEACRQGDPSRVKKFLTSDV--VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAH 733
           L  A  +GD   V++ L  ++   +  + + G T L   +        AI   L+++GA 
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRF-GKTALQVMMF----GSTAIALELLKQGAS 60

Query: 734 LNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL 793
            N ++    +P+H AA  G LD L  L+  GA VN+ D  G   +H   ++  T  V  L
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 794 LSHNAD 799
            +  +D
Sbjct: 121 AAE-SD 125

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 85.2 bits (212), Expect = 3e-19
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  D ++ L+  GA ++  D  G  P+H A   GH  VV  L   +++ + RD    TP
Sbjct: 78  TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHRRDARGLTP 136

Query: 61  LHEAAAKGKTDV 72
           L  A  +G  D+
Sbjct: 137 LELALQRGAQDL 148

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 80.1 bits (199), Expect = 1e-17
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G +P+H A           ++ L+  GA +N  +     PIHLA   GH  V+  L    
Sbjct: 68  GTSPVHDAA---RTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-E 123

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSH 796
           + ++  D  G T L    +      V +L  H
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 77.8 bits (193), Expect = 8e-17
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  P+H+A   G  +  ++L++ GA+VN  D     P+H A  +    V S L +  +D 
Sbjct: 68  GTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDL 126

Query: 274 TLHNCHSKSAIDVA 287
              +    + +++A
Sbjct: 127 HRRDARGLTPLELA 140

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 73.2 bits (181), Expect = 3e-15
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G   L     +G   +   L+K GA+ N  D    +P+H+AA    L+   +L+  GAD 
Sbjct: 36  GKTALQVM-MFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV 94

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 70.5 bits (174), Expect = 3e-14
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 21/87 (24%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            V+HGA+VNV D     P+H A  +G   +V  L    +D  +++  G TPL+L       
Sbjct: 88   VEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLEL------- 139

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLL 1150
                         A ++G    V  L 
Sbjct: 140  -------------ALQRGAQDLVDILQ 153

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 65.9 bits (162), Expect = 1e-12
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 217 PLHNACSYGHFEVTEMLI-KAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            L  A + G  +    L+ +   + +A++ +  T L          +   LL +GA P
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQ-VMMFGSTAIALELLKQGASP 61

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 62.8 bits (154), Expect = 1e-11
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLS 268
           P+H A   GH  V   L    ++++  D    TPL  A  +   ++  +L  
Sbjct: 104 PIHLAVQEGHTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 57.8 bits (141), Expect = 7e-10
 Identities = 19/100 (19%), Positives = 31/100 (31%), Gaps = 33/100 (33%)

Query: 27  PLHNACSFGHADVVRLLLEAD-ANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKS 85
            L  A + G    VR LL  +  +P+  + +  T L      G T +      A      
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQ-VMMFGSTAI------AL----- 52

Query: 86  NQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                                 L  GA P +++  G +P+
Sbjct: 53  --------------------ELLKQGASPNVQDTSGTSPV 72

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 57.4 bits (140), Expect = 1e-09
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLE 45
            G   VV +L  + + +H RD  GL PL  A   G  D+V +L  
Sbjct: 111 EGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 48.9 bits (118), Expect = 1e-06
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 1129 RGNSALLDAAKKGNLGRVQKLLTAD--NINCRDAQGRNSTPLHLAA 1172
            R    L  AA +G++  V++LL  +  + +  +  G+  T L +  
Sbjct: 1    RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGK--TALQVMM 44

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 48.6 bits (117), Expect = 1e-06
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 744 PIHLAADLGHLDVLDTLL-RLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            +  AA  G +  +  LL R     + ++  G+TAL              LL   A 
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGST-AIALELLKQGAS 60

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 46.3 bits (111), Expect = 9e-06
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH 1099
              ++++  D    TPL  A  +G  D+V +L  H
Sbjct: 122  AESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  136 bits (345), Expect = 3e-36
 Identities = 41/190 (21%), Positives = 62/190 (32%), Gaps = 54/190 (28%)

Query: 430 DLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSA 489
           ++ G+    L      N        +AHG  V              L +++ +G   L  
Sbjct: 2   EITGQ--VSLPPGKRTNLRKTGSERIAHGMRVKFNPL-----PLALLLDSSLEGEFDLVQ 54

Query: 490 LLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLH 549
            + +                +  D             +  +  G   T LH A       
Sbjct: 55  RI-IY---------------EVDD------------PSLPNDEGI--TALHNAV------ 78

Query: 550 NACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNT- 601
                GH E+ + LV+ G NVN AD   +TPLH AA        K L++ GA +      
Sbjct: 79  ---CAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYS 135

Query: 602 DGKTALDLAV 611
           D +TA D   
Sbjct: 136 DMQTAADKCE 145

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  123 bits (310), Expect = 1e-31
 Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 47/211 (22%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           LL++S  G+  +V R++       +  + +G   T LH A       +V++L+  G +V 
Sbjct: 41  LLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGI--TALHNAVCAGHTEIVKFLVQFGVNV- 96

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              NA D  G+TPLH AA     Q+   L +                 G           
Sbjct: 97  ---NAADSDGWTPLHCAASCNNVQVCKFL-VE---------------SGAA--------- 128

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              V A   +  +                   G+ + ++ L      + + +      L 
Sbjct: 129 ---VFAMTYSDMQ--------TAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALW 177

Query: 583 EAAAKA----LLQHGADINLKNTDGKTALDL 609
           +   +      ++ G  + + + + +  ++ 
Sbjct: 178 DYEPQNDDELPMKEGDCMTIIHREDEDEIEW 208

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 95.4 bits (238), Expect = 5e-22
 Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 11/133 (8%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  D+V+ ++         +D G+  LHNA   GH ++V+ L++   N N  D+  +TP
Sbjct: 47  EGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTP 106

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPM-------HKDRSCYL-AHGA 112
           LH AA+     VC   +  E  +      Y     T           +   S +L     
Sbjct: 107 LHCAASCNNVQVC--KFLVESGAAVFAMTYS-DMQTAADKCEEMEEGYTQCSQFLYGVQE 163

Query: 113 DPFLKNQEGQTPL 125
              + N+     L
Sbjct: 164 KMGIMNKGVIYAL 176

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 86.5 bits (215), Expect = 7e-19
 Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 34/126 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
              +      +A G  +   +   L  L ++   G  D+V+ ++    +P+  ++   T 
Sbjct: 15  TNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITA 73

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQ 119
           LH A   G T++       +                          +L   G +    + 
Sbjct: 74  LHNAVCAGHTEI------VK--------------------------FLVQFGVNVNAADS 101

Query: 120 EGQTPL 125
           +G TPL
Sbjct: 102 DGWTPL 107

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 85.4 bits (212), Expect = 1e-18
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 4/124 (3%)

Query: 676 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLN 735
           L    R            +  +  K        L  +          +V+ +I +    +
Sbjct: 9   LPPGKRTNLRKTGS-ERIAHGMRVKFNPLPLALLLDSSLE---GEFDLVQRIIYEVDDPS 64

Query: 736 EKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLS 795
             N E +  +H A   GH +++  L++ G  VN  D  G T LH  A  +  Q  + L+ 
Sbjct: 65  LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124

Query: 796 HNAD 799
             A 
Sbjct: 125 SGAA 128

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 84.6 bits (210), Expect = 3e-18
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 16/126 (12%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            + HG  V    L     L +++ +G+ D+V+ ++    DPS  N +G T L   V  G  
Sbjct: 25   IAHGMRVKFNPL-PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHT 83

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQ-GRNSTPL 1168
            ++   L             G + L  AA   N+   + L+ +   +        + +   
Sbjct: 84   EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADK 143

Query: 1169 HLAAGE 1174
                 E
Sbjct: 144  CEEMEE 149

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 84.2 bits (209), Expect = 4e-18
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 19/128 (14%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +    + ++ +    T LH A   G  +IV+ L+Q G + +  + DG TPL       + 
Sbjct: 57   IYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV 116

Query: 1123 DVSDLL---------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNST 1166
             V   L               +  +   +  ++G     Q L      +   +       
Sbjct: 117  QVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVI--Y 174

Query: 1167 PLHLAAGE 1174
             L     +
Sbjct: 175  ALWDYEPQ 182

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 82.7 bits (205), Expect = 1e-17
 Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 4/95 (4%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G   L     +     +      I  G  +       LA +  ++  G  D++  ++   
Sbjct: 5   GQVSLPPGKRT---NLRKTGSERIAHGMRVKFNPLP-LALLLDSSLEGEFDLVQRIIYEV 60

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
              +L +  G TALH       T+ V+ L+    +
Sbjct: 61  DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN 95

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 27/59 (45%), Positives = 37/59 (62%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G+  LHNA   GH E+ + L++ G NVNA D   +TPLH AAS + ++VC  L+  GA 
Sbjct: 70  GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA 128

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 78.4 bits (194), Expect = 4e-16
 Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 3/77 (3%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLH---PLHNACSFGHADVVRLLLEADANPNTRDNWN 57
                V ++L+ SGA++ A     +            G+    + L          +   
Sbjct: 113 CNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGV 172

Query: 58  FTPLHEAAAKGKTDVCI 74
              L +   +   ++ +
Sbjct: 173 IYALWDYEPQNDDELPM 189

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 77.3 bits (191), Expect = 9e-16
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 8/128 (6%)

Query: 676 LLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHL 734
           LL++  +G+   V++ +      +  +   G T LH AV +       IV+ L++ G ++
Sbjct: 41  LLDSSLEGEFDLVQRIIYEVDDPSLPN-DEGITALHNAVCA---GHTEIVKFLVQFGVNV 96

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLV---DVLGQTALHRTARDDKTQAVR 791
           N  + +   P+H AA   ++ V   L+  GA V  +   D+           +  TQ  +
Sbjct: 97  NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156

Query: 792 VLLSHNAD 799
            L      
Sbjct: 157 FLYGVQEK 164

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 13/60 (21%), Positives = 25/60 (41%)

Query: 213 LGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           L L  L ++   G F++ + +I    + +  +    T LH A      E+   L+  G +
Sbjct: 36  LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN 95

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 74.2 bits (183), Expect = 1e-14
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 14/132 (10%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNK---ELLAPIHLAADLGHLDVLDTLL 761
           G TPLHCA +        + + L+  GA +        +  A      + G+      L 
Sbjct: 103 GWTPLHCAASCNN---VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 159

Query: 762 RLGAKVNLVDVLGQTALHRTARDD-----KTQAVRVLLSHNADTSIVSLLVIFSCSTNLG 816
            +  K+ +++     AL      +       +   + + H  D   +        +   G
Sbjct: 160 GVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWW-WARLNDKEG 218

Query: 817 L--KHLLELFER 826
              ++LL L+ R
Sbjct: 219 YVPRNLLGLYPR 230

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 72.6 bits (179), Expect = 3e-14
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAM---DLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           PLH A S  + +V + L+++GA V AM   D+       E   +   +    L       
Sbjct: 106 PLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 165

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 71.9 bits (177), Expect = 6e-14
 Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 1/60 (1%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G V L         +     I  G  V    L     L +++ +   ++   ++ E  DP
Sbjct: 5   GQVSLPPGKRTNLRKTGSERIAHGMRVKFNPL-PLALLLDSSLEGEFDLVQRIIYEVDDP 63

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 70.7 bits (174), Expect = 2e-13
 Identities = 26/108 (24%), Positives = 37/108 (34%), Gaps = 17/108 (15%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL--------- 1128
              L               + HG    K N      L     EG+ D+   +         
Sbjct: 7    VSLPPGKRTNLRKTGSERIAHGMRV-KFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL 65

Query: 1129 ---RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                G +AL +A   G+   V+ L+    N+N  D+ G   TPLH AA
Sbjct: 66   PNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGW--TPLHCAA 111

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 60.7 bits (148), Expect = 4e-10
 Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 3/59 (5%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTL 275
                   G+ + ++ L      +  M+      L +   ++  E   L + EG   T+
Sbjct: 142 DKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDE---LPMKEGDCMTI 197

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 59.5 bits (145), Expect = 8e-10
 Identities = 13/105 (12%), Positives = 23/105 (21%), Gaps = 32/105 (30%)

Query: 21  DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE 80
           +  G   L               +                L +++ +G+ D+       +
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPL-PLALLLDSSLEGEFDL------VQ 54

Query: 81  HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                                      +    DP L N EG T L
Sbjct: 55  -------------------------RIIYEVDDPSLPNDEGITAL 74

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 42.6 bits (101), Expect = 4e-04
 Identities = 6/62 (9%), Positives = 19/62 (30%), Gaps = 5/62 (8%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRD--GATPLDLVREGD 1121
                  + + +      L +   +   +   L ++ G   +  +R+          R  D
Sbjct: 159  YGVQEKMGIMNKGVIYALWDYEPQNDDE---LPMKEGDCMTIIHREDEDEIEWWWARLND 215

Query: 1122 QD 1123
            ++
Sbjct: 216  KE 217

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  133 bits (337), Expect = 9e-36
 Identities = 49/206 (23%), Positives = 62/206 (30%), Gaps = 56/206 (27%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
            L   K G                   D+   + TP   AA       +  LL    DV 
Sbjct: 18  YLIEWKDGHSPSWVPSSY------IAADVVSEYETPWWTAARKADEQALSQLL-EDRDV- 69

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              +A D+ G T L   A  G  +   LL                   G D         
Sbjct: 70  ---DAVDENGRTALLFVAGLGSDKCVRLL-AE---------------AGAD--------- 101

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              ++ RD  G   T LH AAG         Y   EV E LV+ GA++ V D    T L 
Sbjct: 102 ---LDHRDMRGGL-TALHMAAG---------YVRPEVVEALVELGADIEVEDERGLTALE 148

Query: 583 EAA-------AKALLQHGADINLKNT 601
            A            +Q G  I L+  
Sbjct: 149 LAREILKTTPKGNPMQFGRRIGLEKV 174

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  133 bits (336), Expect = 1e-35
 Identities = 44/187 (23%), Positives = 64/187 (34%), Gaps = 55/187 (29%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
            G  +                      ADV S+         TP   AA+K   Q  + L
Sbjct: 11  AGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSE-------YETPWWTAARKADEQALSQL 63

Query: 492 PLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNA 551
                             +  D            V+A D  GR  T L F A        
Sbjct: 64  -----------------LEDRD------------VDAVDENGR--TALLFVA-------- 84

Query: 552 CSYGHYEVTEMLVKHGANVNVADL-WKFTPLHEAA-------AKALLQHGADINLKNTDG 603
              G  +   +L + GA+++  D+    T LH AA        +AL++ GADI +++  G
Sbjct: 85  -GLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERG 143

Query: 604 KTALDLA 610
            TAL+LA
Sbjct: 144 LTALELA 150

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 93.3 bits (233), Expect = 7e-22
 Identities = 29/128 (22%), Positives = 43/128 (33%), Gaps = 33/128 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD-NWNFT 59
              +  +  LL     + A D+ G   L      G    VRLL EA A+ + RD     T
Sbjct: 54  KADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLT 112

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
            LH AA   + +V                                   +  GAD  ++++
Sbjct: 113 ALHMAAGYVRPEVV-------------------------------EALVELGADIEVEDE 141

Query: 120 EGQTPLDL 127
            G T L+L
Sbjct: 142 RGLTALEL 149

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 89.5 bits (223), Expect = 1e-20
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 1   YGRKDVVEYLLASGASIHARDD-GGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
            G    V  L  +GA +  RD  GGL  LH A  +   +VV  L+E  A+    D    T
Sbjct: 86  LGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLT 145

Query: 60  PLHEAAAKGKTDVC 73
            L  A    KT   
Sbjct: 146 ALELAREILKTTPK 159

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 87.9 bits (219), Expect = 5e-20
 Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 8/135 (5%)

Query: 676 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLN 735
              A R+ D   + + L    V+      G T L              V  L   GA L+
Sbjct: 48  WWTAARKADEQALSQLLEDRDVDAVDEN-GRTALLFVAGL---GSDKCVRLLAEAGADLD 103

Query: 736 EKNKEL-LAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
            ++    L  +H+AA     +V++ L+ LGA + + D  G TAL       KT      +
Sbjct: 104 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 163

Query: 795 SHNAD---TSIVSLL 806
                     ++++L
Sbjct: 164 QFGRRIGLEKVINVL 178

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 84.1 bits (209), Expect = 1e-18
 Identities = 29/122 (23%), Positives = 40/122 (32%), Gaps = 25/122 (20%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKN-RDGATPLDLVREGDQDV 1124
               +V+  D    T L   A  G    VRLL + GAD   ++ R G T L +        
Sbjct: 65   EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM-------- 116

Query: 1125 SDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCRV 1183
                        AA       V+ L+    +I   D +G   T L LA  E         
Sbjct: 117  ------------AAGYVRPEVVEALVELGADIEVEDERGL--TALELAR-EILKTTPKGN 161

Query: 1184 TL 1185
             +
Sbjct: 162  PM 163

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 78.7 bits (195), Expect = 9e-17
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDL-WQFTPLHEAASKSRLEVCSLLLSEGADPTL 275
            L      G  +   +L +AGA+++  D+    T LH AA   R EV   L+  GAD  +
Sbjct: 79  ALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV 138

Query: 276 HNCHSKSAIDVA 287
            +    +A+++A
Sbjct: 139 EDERGLTALELA 150

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 77.9 bits (193), Expect = 2e-16
 Identities = 33/218 (15%), Positives = 60/218 (27%), Gaps = 59/218 (27%)

Query: 567 GANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLS 619
               +                             AD+    ++ +T    A         
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAA-------R 53

Query: 620 GDHKK--EELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLL 677
              ++   +LLE                   D+                  DE     LL
Sbjct: 54  KADEQALSQLLEDR-----------------DV---------------DAVDENGRTALL 81

Query: 678 EACRQGDPSRVKKFLTS---DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHL 734
                G    V + L     D ++ +    G T LH A       R  +VE+L+  GA +
Sbjct: 82  FVAGLGSDKCV-RLLAEAGAD-LDHRDMRGGLTALHMAAGY---VRPEVVEALVELGADI 136

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDV 772
             +++  L  + LA ++         ++ G ++ L  V
Sbjct: 137 EVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKV 174

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 76.8 bits (190), Expect = 4e-16
 Identities = 17/59 (28%), Positives = 23/59 (38%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           GL  LH A  Y   EV E L++ GA++   D    T L  A    +       +  G  
Sbjct: 110 GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRR 168

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 75.2 bits (186), Expect = 1e-15
 Identities = 21/95 (22%), Positives = 28/95 (29%), Gaps = 7/95 (7%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G                          A +  + +    P   AA       L  LL   
Sbjct: 14  GAMEYLIEWKD---GHSPSWVPSSYIAADVVSEYE---TPWWTAARKADEQALSQLLE-D 66

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
             V+ VD  G+TAL   A     + VR+L    AD
Sbjct: 67  RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD 101

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 74.1 bits (183), Expect = 4e-15
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 22/99 (22%)

Query: 1064 VKHGANVNVADL-WKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQ 1122
             + GA+++  D+    T LH AA   + ++V  L++ GAD   ++  G T L+L      
Sbjct: 96   AEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALEL------ 149

Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDA 1160
                          A +          +     I     
Sbjct: 150  --------------AREILKTTPKGNPMQFGRRIGLEKV 174

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 70.6 bits (174), Expect = 5e-14
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           P   A      +    L++   +V+A+D    T L   A     +   LL   GAD
Sbjct: 47  PWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD 101

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 70.6 bits (174), Expect = 5e-14
 Identities = 26/121 (21%), Positives = 39/121 (32%), Gaps = 17/121 (14%)

Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVS 1125
                +                G +          AD      +  TP     R+ D+   
Sbjct: 4    KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAAD---VVSEYETPWWTAARKADEQAL 60

Query: 1126 DLL-----------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAG 1173
              L            G +ALL  A  G+   V+ L  A  +++ RD +G   T LH+AAG
Sbjct: 61   SQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG-GLTALHMAAG 119

Query: 1174 E 1174
             
Sbjct: 120  Y 120

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 67.9 bits (167), Expect = 5e-13
 Identities = 18/94 (19%), Positives = 26/94 (27%), Gaps = 20/94 (21%)

Query: 524 QTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHE 583
             +    TAG  +                  GH           A+V        TP   
Sbjct: 3   NKIIGSRTAGEGAMEYLIEW---------KDGHSPSWVPSSYIAADVVSEY---ETPWWT 50

Query: 584 AA-------AKALLQHGADINLKNTDGKTALDLA 610
           AA          LL    D++  + +G+TAL   
Sbjct: 51  AARKADEQALSQLL-EDRDVDAVDENGRTALLFV 83

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 61.7 bits (151), Expect = 7e-11
 Identities = 14/51 (27%), Positives = 19/51 (37%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPN 51
           Y R +VVE L+  GA I   D+ GL  L  A            ++      
Sbjct: 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIG 170

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 60.2 bits (147), Expect = 2e-10
 Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 4/60 (6%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G +        GH           A+V +      TP   AA K+  +  S LL E  D 
Sbjct: 14  GAMEYLIEWKDGHSPSWVPSSYIAADVVSEY---ETPWWTAARKADEQALSQLL-EDRDV 69

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 57.1 bits (139), Expect = 3e-09
 Identities = 17/113 (15%), Positives = 24/113 (21%), Gaps = 36/113 (31%)

Query: 14  GASIHARDDG-GLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDV 72
              I +R  G G          GH+          A+  +      TP   AA K     
Sbjct: 3   NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE---TPWWTAARKADEQA 59

Query: 73  CIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                                              L    D    ++ G+T L
Sbjct: 60  ------LS--------------------------QLLEDRDVDAVDENGRTAL 80

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 55.6 bits (135), Expect = 7e-09
 Identities = 37/241 (15%), Positives = 58/241 (24%), Gaps = 71/241 (29%)

Query: 228 EVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
           EV +++    A   A                            AD        ++     
Sbjct: 1   EVNKIIGSRTAGEGA------MEYLIEWKDGHSPSWVPSSYIAADV---VSEYETP---- 47

Query: 288 PTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLL 347
                               A R+ D   + + L    V+      G T     LL    
Sbjct: 48  -----------------WWTAARKADEQALSQLLEDRDVDAVDEN-GRTA----LLFVAG 85

Query: 348 SDDKEFITVAE---EMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLL 404
               +         E  A + +HRD    GG TAL +A    +        VV+    L+
Sbjct: 86  LGSDK---CVRLLAEAGADL-DHRDM--RGGLTALHMAAGYVRP------EVVEA---LV 130

Query: 405 EASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSK 464
               G D              +   D  G   T L  A    +       +  G  +  +
Sbjct: 131 --ELGAD--------------IEVEDERGL--TALELAREILKTTPKGNPMQFGRRIGLE 172

Query: 465 D 465
            
Sbjct: 173 K 173

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 44.0 bits (105), Expect = 7e-05
 Identities = 13/65 (20%), Positives = 19/65 (29%), Gaps = 4/65 (6%)

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
           +    E      +    GH         + A V       +T     AR    QA+  LL
Sbjct: 8   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADEQALSQLL 64

Query: 795 SHNAD 799
             + D
Sbjct: 65  -EDRD 68

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  132 bits (334), Expect = 9e-36
 Identities = 38/190 (20%), Positives = 56/190 (29%), Gaps = 52/190 (27%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
                        L  AA   RV  V  LL  GA+     NA + +G  P+      G  
Sbjct: 5   AGSSMEPSA--DWLATAAARGRVEEVRALLEAGANP----NAPNSYGRRPIQVMMM-GSA 57

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGL 545
           +++ LL L                 G +             N  D A             
Sbjct: 58  RVAELL-LL---------------HGAE------------PNCADPATLTR--------- 80

Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINL 598
            P+H+A   G  +   +L + GA ++V D W   P+  A        A+ L         
Sbjct: 81  -PVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG 139

Query: 599 KNTDGKTALD 608
            N     A +
Sbjct: 140 SNHARIDAAE 149

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  110 bits (277), Expect = 4e-28
 Identities = 36/165 (21%), Positives = 56/165 (33%), Gaps = 54/165 (32%)

Query: 455 LAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDL 514
           +   A    +           L  AA +GR +    L L                 G + 
Sbjct: 1   MEPAAGSSMEP------SADWLATAAARGRVEEVRAL-LE---------------AGAN- 37

Query: 515 TKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVAD 574
                       NA ++ GR   P+               G   V E+L+ HGA  N AD
Sbjct: 38  -----------PNAPNSYGR--RPIQVMM----------MGSARVAELLLLHGAEPNCAD 74

Query: 575 LWKFT-PLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
               T P+H+AA          L + GA +++++  G+  +DLA 
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE 119

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 96.8 bits (242), Expect = 2e-23
 Identities = 33/128 (25%), Positives = 48/128 (37%), Gaps = 33/128 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT- 59
            GR + V  LL +GA+ +A +  G  P+      G A V  LLL   A PN  D    T 
Sbjct: 22  RGRVEEVRALLEAGANPNAPNSYGRRPIQVM-MMGSARVAELLLLHGAEPNCADPATLTR 80

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
           P+H+AA +G  D                 +                     GA   +++ 
Sbjct: 81  PVHDAAREGFLDTL-------------VVL------------------HRAGARLDVRDA 109

Query: 120 EGQTPLDL 127
            G+ P+DL
Sbjct: 110 WGRLPVDL 117

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 96.4 bits (241), Expect = 3e-23
 Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 18/123 (14%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            ++  A  ++        L  AAA+G+ + VR LL+ GA+P+  N  G  P+ ++  G   
Sbjct: 1    MEPAAGSSMEPSA--DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSAR 58

Query: 1124 VSDLL-------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            V++LL                  + DAA++G L  +  L  A   ++ RDA GR   P+ 
Sbjct: 59   VAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGR--LPVD 116

Query: 1170 LAA 1172
            LA 
Sbjct: 117  LAE 119

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 92.9 bits (232), Expect = 5e-22
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 1   YGRKDVVEYLLASGASIHARD-DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
            G   V E LL  GA  +  D      P+H+A   G  D + +L  A A  + RD W   
Sbjct: 54  MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRL 113

Query: 60  PLHEAAAKGKTDV 72
           P+  A   G  DV
Sbjct: 114 PVDLAEELGHRDV 126

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 86.0 bits (214), Expect = 1e-19
 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 7/126 (5%)

Query: 676 LLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHL 734
           L  A  +G    V+  L +    N  + Y G  P+   +         + E L+  GA  
Sbjct: 16  LATAAARGRVEEVRALLEAGANPNAPNSY-GRRPIQVMMM----GSARVAELLLLHGAEP 70

Query: 735 NEKNKE-LLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL 793
           N  +   L  P+H AA  G LD L  L R GA++++ D  G+  +            R L
Sbjct: 71  NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130

Query: 794 LSHNAD 799
            +    
Sbjct: 131 RAAAGG 136

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 83.7 bits (208), Expect = 9e-19
 Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 29/113 (25%)

Query: 1064 VKHGANVNVADLWKFT-PLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQ 1122
            + HGA  N AD    T P+H+AA +G  D + +L + GA    ++  G  P+DL      
Sbjct: 64   LLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDL------ 117

Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGE 1174
                          A + G+    + L  A       +          + A E
Sbjct: 118  --------------AEELGHRDVARYLRAAAGGTRGSN-------HARIDAAE 149

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 82.5 bits (205), Expect = 2e-18
 Identities = 28/196 (14%), Positives = 50/196 (25%), Gaps = 78/196 (39%)

Query: 366 EHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHI 425
              ++    G   +QV    S +       V +L   LL    G +              
Sbjct: 39  NAPNSY---GRRPIQVMMMGSAR-------VAEL---LL--LHGAE-------------- 69

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
            NC D     + P+H AA    +  +  L   GA +    +  D WG  P+  A + G  
Sbjct: 70  PNCADPATL-TRPVHDAAREGFLDTLVVLHRAGARL----DVRDAWGRLPVDLAEELGHR 124

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGL 545
            ++  L  +                 G                 +               
Sbjct: 125 DVARYL-RA---------------AAGG------------TRGSN--------------- 141

Query: 546 VPLHNACSYGHYEVTE 561
                  + G  ++ +
Sbjct: 142 -HARIDAAEGPSDIPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 82.1 bits (204), Expect = 2e-18
 Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
               L  A       R   V +L+  GA+ N  N     PI +   +G   V + LL  G
Sbjct: 12  SADWLATAAAR---GRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG 67

Query: 765 AKVNLVDVLGQT-ALHRTARDDKTQAVRVLLSHNAD 799
           A+ N  D    T  +H  AR+     + VL    A 
Sbjct: 68  AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 82.1 bits (204), Expect = 3e-18
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  D +  L  +GA +  RD  G  P+  A   GH DV R L  A       +      
Sbjct: 88  EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSN-----H 142

Query: 61  LHEAAAKGKTDV 72
               AA+G +D+
Sbjct: 143 ARIDAAEGPSDI 154

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 79.4 bits (197), Expect = 2e-17
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 4/75 (5%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPT-- 274
           P+H+A   G  +   +L +AGA ++  D W   P+  A      +V   L +        
Sbjct: 81  PVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140

Query: 275 --LHNCHSKSAIDVA 287
                  ++   D+ 
Sbjct: 141 NHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 75.2 bits (186), Expect = 7e-16
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFT-PLHEAASKSRLEVCSLLLSEGAD 272
           G  P+      G   V E+L+  GA  N  D    T P+H+AA +  L+   +L   GA 
Sbjct: 45  GRRPIQVM-MMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103

Query: 273 PTLHNCHSKSAIDVA 287
             + +   +  +D+A
Sbjct: 104 LDVRDAWGRLPVDLA 118

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 73.3 bits (181), Expect = 3e-15
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            L  A + G  E    L++AGAN NA + +   P+          V  LLL  GA+P
Sbjct: 15  WLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQ-VMMMGSARVAELLLLHGAEP 70

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 67.5 bits (166), Expect = 3e-13
 Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 4/63 (6%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
             + GA ++V D W   P+  A   G  D+ R L          N           EG  D
Sbjct: 98   HRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAA----EGPSD 153

Query: 1124 VSD 1126
            + D
Sbjct: 154  IPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 66.7 bits (164), Expect = 6e-13
 Identities = 21/83 (25%), Positives = 29/83 (34%), Gaps = 3/83 (3%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
            N   P T   P+H A           +  L R GA L+ ++     P+ LA +LGH DV
Sbjct: 70  PNCADPATLTRPVHDAARE---GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDV 126

Query: 757 LDTLLRLGAKVNLVDVLGQTALH 779
              L          +     A  
Sbjct: 127 ARYLRAAAGGTRGSNHARIDAAE 149

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 55.2 bits (134), Expect = 6e-09
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 728 IRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKT 787
           +   A      +     +  AA  G ++ +  LL  GA  N  +  G+  +         
Sbjct: 1   MEPAA--GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSA 57

Query: 788 QAVRVLLSHNAD 799
           +   +LL H A+
Sbjct: 58  RVAELLLLHGAE 69

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 54.8 bits (133), Expect = 9e-09
 Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 5/49 (10%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEV 262
           G +P+  A   GH +V   L  A       +          A++   ++
Sbjct: 111 GRLPVDLAEELGHRDVARYLRAAAGGTRGSN-----HARIDAAEGPSDI 154

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 48.6 bits (117), Expect = 1e-06
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 234 IKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
           ++  A  +         L  AA++ R+E    LL  GA+P   N + +  I V 
Sbjct: 1   MEPAAGSSMEPSA--DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM 52

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 45.5 bits (109), Expect = 2e-05
 Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 5/40 (12%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVV 40
            G +DV  YL A+       +           + G +D+ 
Sbjct: 121 LGHRDVARYLRAAAGGTRGSN-----HARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 44.4 bits (106), Expect = 3e-05
 Identities = 9/54 (16%), Positives = 14/54 (25%), Gaps = 8/54 (14%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLD 758
           G  P+  A        + +   L          N        + A  G  D+ D
Sbjct: 111 GRLPVDLAE---ELGHRDVARYLRAAAGGTRGSN-----HARIDAAEGPSDIPD 156

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 40.5 bits (96), Expect = 6e-04
 Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 33/82 (40%)

Query: 44  LEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKD 103
           +E  A  +   +     L  AAA+G+ +               + +              
Sbjct: 1   MEPAAGSSMEPSA--DWLATAAARGRVEEV-------------RAL-------------- 31

Query: 104 RSCYLAHGADPFLKNQEGQTPL 125
               L  GA+P   N  G+ P+
Sbjct: 32  ----LEAGANPNAPNSYGRRPI 49

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  133 bits (335), Expect = 4e-35
 Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 30/217 (13%)

Query: 406 ASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD 465
           A  G    +  R+L+         D D R  T LH+A       +VE+LL  G  V    
Sbjct: 14  AYSGKLDELKERILADKSLA-TRTDQDSR--TALHWACSAGHTEIVEFLLQLGVPV---- 66

Query: 466 NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRE----LFEACKGGDLTKVKKLV 521
           N  D  G++PLH AA  G  ++   L +  +  N   +     L  A           L+
Sbjct: 67  NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL 126

Query: 522 NPQT-VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTP 580
                 +A+D                 +H A + G+ ++  +L+ + A+ N+ D    TP
Sbjct: 127 EGGANPDAKDHYDA-----------TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTP 175

Query: 581 LHEAA-------AKALLQHGADINLKNTDGKTALDLA 610
           LH A        AK L+  GA I ++N + KT L +A
Sbjct: 176 LHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA 212

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  132 bits (334), Expect = 7e-35
 Identities = 44/266 (16%), Positives = 84/266 (31%), Gaps = 48/266 (18%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADI 596
            ++  + A S    E+ E ++   +     D    T LH A         + LLQ G  +
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 66

Query: 597 NLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCC 656
           N K+  G + L +A              +E+++A  + G  ++                 
Sbjct: 67  NDKDDAGWSPLHIAA---------SAGXDEIVKALLVKGAHVNA---------------- 101

Query: 657 CKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSP 716
                       ++     L  A  +         L          +   T +H A    
Sbjct: 102 -----------VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK- 149

Query: 717 YPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQT 776
                 +V  L+   A  N ++ E   P+HLA D   ++    L+  GA + + +   +T
Sbjct: 150 --GNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKT 207

Query: 777 ALHRTARDDKTQAVRVLLSHNADTSI 802
            L           +   L+   + S+
Sbjct: 208 PLQVAKGGLGL--ILKRLAEGEEASM 231

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  119 bits (301), Expect = 2e-30
 Identities = 59/306 (19%), Positives = 91/306 (29%), Gaps = 91/306 (29%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPS 496
              + A       + E +LA  +        TD+   T LH A   G T++   L L   
Sbjct: 9   MICNLAYSGKLDELKERILADKSLA----TRTDQDSRTALHWACSAGHTEIVEFL-LQ-- 61

Query: 497 AANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGH 556
                         G              VN +D AG   +PLH AA         S G 
Sbjct: 62  -------------LGVP------------VNDKDDAGW--SPLHIAA---------SAGX 85

Query: 557 YEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDL 609
            E+ + L+  GA+VN  +    TPLH AA       A  LL+ GA+ + K+    TA+  
Sbjct: 86  DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHR 145

Query: 610 AVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKD 669
           A               +++          +                            +D
Sbjct: 146 AA---------AKGNLKMVHILLFYKASTNI---------------------------QD 169

Query: 670 EFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIR 729
                 L  AC +      K  +T     +       TPL  A          ++   + 
Sbjct: 170 TEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK-----GGLGLILKRLA 224

Query: 730 KGAHLN 735
           +G   +
Sbjct: 225 EGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  116 bits (291), Expect = 3e-29
 Identities = 53/273 (19%), Positives = 86/273 (31%), Gaps = 60/273 (21%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
               ++ E +LA  +     D      LH ACS GH ++V  LL+     N +D+  ++P
Sbjct: 17  GKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSP 76

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH AA+ G  ++                                   L  GA     NQ 
Sbjct: 77  LHIAASAGXDEIV-------------------------------KALLVKGAHVNAVNQN 105

Query: 121 GQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS 180
           G TPL    +++   +    +    GA   A+          +       +         
Sbjct: 106 GCTPLHYAASKNRHEIAVMLLEG--GANPDAKDHYDATAMHRAAAKGNLKM-----VHIL 158

Query: 181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANV 240
                S ++  T    PL                    H AC     E  + L+  GA++
Sbjct: 159 LFYKASTNIQDTEGNTPL--------------------HLACDEERVEEAKFLVTQGASI 198

Query: 241 NAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
              +  + TPL  A     L +    L+EG + 
Sbjct: 199 YIENKEEKTPLQVAK--GGLGLILKRLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  109 bits (275), Expect = 4e-27
 Identities = 63/305 (20%), Positives = 95/305 (31%), Gaps = 87/305 (28%)

Query: 472 GFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT 531
                + A      +L   + L+                                   D 
Sbjct: 7   NIMICNLAYSGKLDELKERI-LA---------------DKSL------------ATRTDQ 38

Query: 532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA------ 585
             R  T LH+A          S GH E+ E L++ G  VN  D   ++PLH AA      
Sbjct: 39  DSR--TALHWAC---------SAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDE 87

Query: 586 -AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWP 644
             KALL  GA +N  N +G T L  A             + E+       G         
Sbjct: 88  IVKALLVKGAHVNAVNQNGCTPLHYAA---------SKNRHEIAVMLLEGGANPDA---- 134

Query: 645 LGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT 704
                                  KD +    +  A  +G+   V   L            
Sbjct: 135 -----------------------KDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTE 171

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G+TPLH A      +R    + L+ +GA +  +NKE   P+ +A   G L ++   L  G
Sbjct: 172 GNTPLHLACDE---ERVEEAKFLVTQGASIYIENKEEKTPLQVAK--GGLGLILKRLAEG 226

Query: 765 AKVNL 769
            + ++
Sbjct: 227 EEASM 231

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  100 bits (250), Expect = 1e-23
 Identities = 42/253 (16%), Positives = 69/253 (27%), Gaps = 35/253 (13%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            ++  + A S    E+ E ++   +     D    T LH A S    E+   LL  G   
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 66

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT 333
              +    S                      L  A   G    VK  L            
Sbjct: 67  NDKDDAGWSP---------------------LHIAASAGXDEIVKALLVKGAHVNAVNQN 105

Query: 334 GDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEP 393
           G TP    L      +  E   +  E  A          +  + A          +L   
Sbjct: 106 GCTP----LHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY 161

Query: 394 PSVVDLESQ-----LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRV 448
            +  +++       L  A     +     L++    I    + + +  TPL  A G    
Sbjct: 162 KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASI-YIENKEEK--TPLQVAKGGLG- 217

Query: 449 AVVEYLLAHGADV 461
            ++   LA G + 
Sbjct: 218 -LILKRLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 94.5 bits (235), Expect = 1e-21
 Identities = 46/267 (17%), Positives = 87/267 (32%), Gaps = 60/267 (22%)

Query: 22  DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEH 81
              +   + A S    ++   +L   +     D  + T LH A + G T++       E 
Sbjct: 5   VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEI------VE- 57

Query: 82  SSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPLDLTVAEDVRSLLQDA 140
                                    +L   G     K+  G +PL +  +     +++  
Sbjct: 58  -------------------------FLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKAL 92

Query: 141 MAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLAL 200
           + +  GA   A   +   P  Y+ +     +     A     GG +              
Sbjct: 93  LVK--GAHVNAVNQNGCTPLHYAASKNRHEI-----AVMLLEGGANPDAKDHY------- 138

Query: 201 ETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRL 260
                            +H A + G+ ++  +L+   A+ N  D    TPLH A  + R+
Sbjct: 139 -------------DATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERV 185

Query: 261 EVCSLLLSEGADPTLHNCHSKSAIDVA 287
           E    L+++GA   + N   K+ + VA
Sbjct: 186 EEAKFLVTQGASIYIENKEEKTPLQVA 212

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 86.1 bits (213), Expect = 7e-19
 Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 16/123 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +   +     D    T LH A + G  +IV  LLQ G   + K+  G +PL +    G  
Sbjct: 27   LADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXD 86

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            ++   L             G + L  AA K        LL    N + +D      T +H
Sbjct: 87   EIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA--TAMH 144

Query: 1170 LAA 1172
             AA
Sbjct: 145  RAA 147

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 78.0 bits (192), Expect = 4e-16
 Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 16/127 (12%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++ G  VN  D   ++PLH AA+ G  +IV+ LL  GA  +  N++G TPL     +   
Sbjct: 60   LQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRH 119

Query: 1123 DVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
            +++ +L               +A+  AA KGNL  V  LL    + N +D +G   TPLH
Sbjct: 120  EIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGN--TPLH 177

Query: 1170 LAAGEKR 1176
            LA  E+R
Sbjct: 178  LACDEER 184

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 64.9 bits (158), Expect = 1e-11
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 23/95 (24%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAA 1138
               + A +    ++   +L   +  ++ ++D  T L                      A 
Sbjct: 9    MICNLAYSGKLDELKERILADKSLATRTDQDSRTALHW--------------------AC 48

Query: 1139 KKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
              G+   V+ LL     +N +D  G   +PLH+AA
Sbjct: 49   SAGHTEIVEFLLQLGVPVNDKDDAGW--SPLHIAA 81

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 23/113 (20%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++ GAN +  D +  T +H AAAKG   +V +LL + A  + ++ +G TPL L   E   
Sbjct: 126  LEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERV 185

Query: 1123 DVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEK 1175
            + +  L    A                    +I   + + +  TPL +A G  
Sbjct: 186  EEAKFLVTQGA--------------------SIYIENKEEK--TPLQVAKGGL 216

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 56.0 bits (135), Expect = 1e-08
 Identities = 13/64 (20%), Positives = 22/64 (34%)

Query: 736 EKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLS 795
           E     +   +LA      ++ + +L   +     D   +TALH       T+ V  LL 
Sbjct: 2   EGCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQ 61

Query: 796 HNAD 799
               
Sbjct: 62  LGVP 65

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            + + A+ N+ D    TPLH A  + + +  + L+  GA    +N++  TPL + + G   
Sbjct: 159  LFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK-GGLG 217

Query: 1124 VSDLL 1128
            +    
Sbjct: 218  LILKR 222

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 47.6 bits (113), Expect = 8e-06
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPN 51
             R +  ++L+  GASI+  +     PL  A   G   ++   L      +
Sbjct: 182 EERVEEAKFLVTQGASIYIENKEEKTPLQVAK--GGLGLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADP 1103
            V  GA++ + +  + TPL    AKG   ++   L  G + 
Sbjct: 192  VTQGASIYIENKEEKTPLQ--VAKGGLGLILKRLAEGEEA 229

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  129 bits (327), Expect = 4e-35
 Identities = 38/177 (21%), Positives = 57/177 (32%), Gaps = 52/177 (29%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
           ++           L  AA   +V  V  LL  GAD     NA +++G  P+      G  
Sbjct: 5   IHMLGGSSD--AGLATAAARGQVETVRQLLEAGADP----NALNRFGRRPIQVMMM-GSA 57

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGL 545
           Q++ LL L                 G +             N  D A             
Sbjct: 58  QVAELL-LL---------------HGAE------------PNCADPATLTR--------- 80

Query: 546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGAD 595
            P+H+A   G  +   +L + GA ++V D W   P+  A        A+ L     D
Sbjct: 81  -PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  114 bits (288), Expect = 8e-30
 Identities = 35/161 (21%), Positives = 54/161 (33%), Gaps = 52/161 (32%)

Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKV 517
              +    +         L  AA +G+ +    L L                 G D    
Sbjct: 2   SPGI----HMLGGSSDAGLATAAARGQVETVRQL-LE---------------AGAD---- 37

Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK 577
                    NA +  GR   P+               G  +V E+L+ HGA  N AD   
Sbjct: 38  --------PNALNRFGR--RPIQVMM----------MGSAQVAELLLLHGAEPNCADPAT 77

Query: 578 FT-PLHEAA-------AKALLQHGADINLKNTDGKTALDLA 610
            T P+H+AA          L + GA +++ +  G+  +DLA
Sbjct: 78  LTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLA 118

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 96.7 bits (242), Expect = 1e-23
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 16/120 (13%)

Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSD 1126
               +++        L  AAA+G+ + VR LL+ GADP+  NR G  P+ ++  G   V++
Sbjct: 2    SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSAQVAE 61

Query: 1127 LL-------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
            LL                  + DAA++G L  +  L  A   ++  DA GR   P+ LA 
Sbjct: 62   LLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGR--LPVDLAE 119

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 94.8 bits (237), Expect = 7e-23
 Identities = 32/128 (25%), Positives = 46/128 (35%), Gaps = 33/128 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT- 59
            G+ + V  LL +GA  +A +  G  P+      G A V  LLL   A PN  D    T 
Sbjct: 22  RGQVETVRQLLEAGADPNALNRFGRRPIQVM-MMGSAQVAELLLLHGAEPNCADPATLTR 80

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
           P+H+AA +G  D                 +                     GA   + + 
Sbjct: 81  PVHDAAREGFLDTL-------------VVL------------------HRAGARLDVCDA 109

Query: 120 EGQTPLDL 127
            G+ P+DL
Sbjct: 110 WGRLPVDL 117

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 93.3 bits (233), Expect = 2e-22
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 1   YGRKDVVEYLLASGASIHARD-DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
            G   V E LL  GA  +  D      P+H+A   G  D + +L  A A  +  D W   
Sbjct: 54  MGSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRL 113

Query: 60  PLHEAAAKGKTDV 72
           P+  A  +G  D+
Sbjct: 114 PVDLAEEQGHRDI 126

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 84.4 bits (210), Expect = 3e-19
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 7/126 (5%)

Query: 676 LLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHL 734
           L  A  +G    V++ L +    N  + + G  P+   +         + E L+  GA  
Sbjct: 16  LATAAARGQVETVRQLLEAGADPNALNRF-GRRPIQVMMM----GSAQVAELLLLHGAEP 70

Query: 735 NEKNKE-LLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL 793
           N  +   L  P+H AA  G LD L  L R GA++++ D  G+  +            R L
Sbjct: 71  NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYL 130

Query: 794 LSHNAD 799
            +   D
Sbjct: 131 HAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 79.0 bits (196), Expect = 2e-17
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 1064 VKHGANVNVADLWKFT-PLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGD 1121
            + HGA  N AD    T P+H+AA +G  D + +L + GA     +  G  P+DL   +G 
Sbjct: 64   LLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGH 123

Query: 1122 QDVSDLLRGNSA 1133
            +D++  L   + 
Sbjct: 124  RDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 79.0 bits (196), Expect = 2e-17
 Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 5/96 (5%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
            D  L  A       +   V  L+  GA  N  N+    PI +   +G   V + LL  G
Sbjct: 12  SDAGLATAAAR---GQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVAELLLLHG 67

Query: 765 AKVNLVDVLGQT-ALHRTARDDKTQAVRVLLSHNAD 799
           A+ N  D    T  +H  AR+     + VL    A 
Sbjct: 68  AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 78.6 bits (195), Expect = 3e-17
 Identities = 14/56 (25%), Positives = 26/56 (46%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           P+H+A   G  +   +L +AGA ++  D W   P+  A  +   ++   L +   D
Sbjct: 81  PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 74.4 bits (184), Expect = 8e-16
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFT-PLHEAASKSRLEVCSLLLSEGAD 272
           G  P+      G  +V E+L+  GA  N  D    T P+H+AA +  L+   +L   GA 
Sbjct: 45  GRRPIQVM-MMGSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103

Query: 273 PTLHNCHSKSAIDVA 287
             + +   +  +D+A
Sbjct: 104 LDVCDAWGRLPVDLA 118

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 74.0 bits (183), Expect = 1e-15
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            L  A + G  E    L++AGA+ NA++ +   P+         +V  LLL  GA+P
Sbjct: 15  GLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQ-VMMMGSAQVAELLLLHGAEP 70

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 67.1 bits (165), Expect = 3e-13
 Identities = 15/49 (30%), Positives = 21/49 (42%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN 49
            G  D +  L  +GA +   D  G  P+  A   GH D+ R L  A  +
Sbjct: 88  EGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 65.5 bits (161), Expect = 1e-12
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 731 GAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAV 790
              ++       A +  AA  G ++ +  LL  GA  N ++  G+  +         Q  
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVA 60

Query: 791 RVLLSHNAD 799
            +LL H A+
Sbjct: 61  ELLLLHGAE 69

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 60.5 bits (148), Expect = 6e-11
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGAD 1102
             + GA ++V D W   P+  A  +G  DI R L     D
Sbjct: 98   HRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 51.7 bits (125), Expect = 7e-08
 Identities = 13/52 (25%), Positives = 21/52 (40%)

Query: 236 AGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
               ++ +       L  AA++ ++E    LL  GADP   N   +  I V 
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVM 52

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 7/26 (26%), Positives = 12/26 (46%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGAN 239
           G +P+  A   GH ++   L  A  +
Sbjct: 111 GRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 40.5 bits (96), Expect = 5e-04
 Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 31/80 (38%)

Query: 46  ADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRS 105
                +     +   L  AAA+G+ +               + +                
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETV-------------RQL---------------- 31

Query: 106 CYLAHGADPFLKNQEGQTPL 125
             L  GADP   N+ G+ P+
Sbjct: 32  --LEAGADPNALNRFGRRPI 49

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  134 bits (339), Expect = 8e-35
 Identities = 28/229 (12%), Positives = 55/229 (24%), Gaps = 59/229 (25%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  A   G+M  V   +     +       G   T  + A   N V++V Y L+      
Sbjct: 99  LYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGW-KTSFYHAVMLNDVSIVSYFLSEIPS-- 154

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
                      + +H   + G   +  LL L                             
Sbjct: 155 ---TFDLAILLSCIHITIKNGHVDMMILL-LD---------------YMTS--------- 186

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
               N  ++      P         +  A      E+ + L K+  N+        +   
Sbjct: 187 ---TNTNNSLLF--IPD--------IKLAIDNKDIEMLQALFKYDINIY-------SANL 226

Query: 583 EAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKK 624
           E         AK +++   +    +      +         +      +
Sbjct: 227 ENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDEIISKNKELR 275

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  130 bits (330), Expect = 1e-33
 Identities = 34/244 (13%), Positives = 69/244 (28%), Gaps = 61/244 (25%)

Query: 375 GYTALQVAGENSKK-----LLQEPPSV--VDLESQLLEASKGGDMTVVTRLLSSCPHIVN 427
           G++A   A  ++       LL        ++ E  L +A+   D  +V  LL S     +
Sbjct: 31  GHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGLDD-S 89

Query: 428 CRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQL 487
             D  G   T L++A     +  V+  +     +            T  + A       +
Sbjct: 90  QFDDKGN--TALYYAVDSGNMQTVKLFVKKNWRLMFYGK---TGWKTSFYHAVMLNDVSI 144

Query: 488 SALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVP 547
                                        V   ++              + +H       
Sbjct: 145 -----------------------------VSYFLSEIPSTFDLAILL--SCIHITI---- 169

Query: 548 LHNACSYGHYEVTEMLVKHGANVNVADLWKFTP-LHEAA-------AKALLQHGADINLK 599
                  GH ++  +L+ +  + N  +   F P +  A         +AL ++  +I   
Sbjct: 170 -----KNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSA 224

Query: 600 NTDG 603
           N + 
Sbjct: 225 NLEN 228

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  117 bits (295), Expect = 6e-29
 Identities = 28/181 (15%), Positives = 49/181 (27%), Gaps = 55/181 (30%)

Query: 439 LHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAA 498
           L     +     ++  L    D        D  G +  + A      +L   L L+    
Sbjct: 4   LSRINTWK-SKQLKSFL-SSKDT----FKADVHGHSASYYAIADNNVRLVCTL-LN---- 52

Query: 499 NDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYE 558
                       G               N  +       PLH AA         +    +
Sbjct: 53  -----------AGAL------------KNLLE----NEFPLHQAA---------TLEDTK 76

Query: 559 VTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDG-KTALDLA 610
           + ++L+  G + +  D    T L+ A         K  ++    +      G KT+   A
Sbjct: 77  IVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHA 136

Query: 611 V 611
           V
Sbjct: 137 V 137

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  108 bits (273), Expect = 4e-26
 Identities = 36/298 (12%), Positives = 79/298 (26%), Gaps = 93/298 (31%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G    + A +  +  +   L+ AGA  N ++     PLH+AA+    ++  +LL  G D 
Sbjct: 31  GHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDD 88

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPY 332
           +  +    +A                     L  A   G+   VK F+  +  + F    
Sbjct: 89  SQFDDKGNTA---------------------LYYAVDSGNMQTVKLFVKKNWRLMFYGKT 127

Query: 333 TGDTPLPGTLLIDLLSDDKEFITVAEEMQATVR---EHRDNGQSG--GYTALQVAGENSK 387
              T                +  V     + V        +        + + +  +N  
Sbjct: 128 GWKTSF--------------YHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGH 173

Query: 388 KLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTP-LHFAAGYN 446
                   ++ L   LL                      N  +       P +  A    
Sbjct: 174 V------DMMIL---LL--DYMTS--------------TNTNNSLLF--IPDIKLAIDNK 206

Query: 447 RVAVVEYLLAHGADVHSKD----------------------NATDKWGFTPLHEAAQK 482
            + +++ L  +  +++S +                       +        + +  + 
Sbjct: 207 DIEMLQALFKYDINIYSANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKL 264

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 96.8 bits (242), Expect = 4e-22
 Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 18/123 (14%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +  GA  N+ +     PLH+AA      IV++LL  G D S+ +  G T L   V  G+ 
Sbjct: 51   LNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNM 108

Query: 1123 DVSDLL--RG-----------NSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLH 1169
                L   +             ++   A    ++  V   L+        A     + +H
Sbjct: 109  QTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILL--SCIH 166

Query: 1170 LAA 1172
            +  
Sbjct: 167  ITI 169

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 92.6 bits (231), Expect = 1e-20
 Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 17/124 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDG-ATPLDL-VREGD 1121
            +  G + +  D    T L+ A   G    V+L ++         + G  T     V   D
Sbjct: 82   LFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 141

Query: 1122 QDVSDLL-----------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTP-L 1168
              +                  S +    K G++  +  LL    + N  ++      P +
Sbjct: 142  VSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLF--IPDI 199

Query: 1169 HLAA 1172
             LA 
Sbjct: 200  KLAI 203

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 89.9 bits (224), Expect = 1e-19
 Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 6/123 (4%)

Query: 677 LEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNE 736
           L         ++K FL+S        + G +  + A+         +V +L+  GA  N 
Sbjct: 4   LSRINTWKSKQLKSFLSSKDTFKADVH-GHSASYYAIAD---NNVRLVCTLLNAGALKNL 59

Query: 737 KNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSH 796
              E   P+H AA L    ++  LL  G   +  D  G TAL+        Q V++ +  
Sbjct: 60  LENE--FPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK 117

Query: 797 NAD 799
           N  
Sbjct: 118 NWR 120

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 88.7 bits (221), Expect = 3e-19
 Identities = 23/136 (16%), Positives = 37/136 (27%), Gaps = 20/136 (14%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNF-T 59
                +V+ LL SG      DD G   L+ A   G+   V+L ++ +          + T
Sbjct: 72  LEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKT 131

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGI---------GGGTGCPMHKDRSCYL-A 109
             + A       +    YF      +      +         G       H D    L  
Sbjct: 132 SFYHAVMLNDVSIV--SYFLSEIPSTFDLAILLSCIHITIKNG-------HVDMMILLLD 182

Query: 110 HGADPFLKNQEGQTPL 125
           +       N     P 
Sbjct: 183 YMTSTNTNNSLLFIPD 198

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 88.0 bits (219), Expect = 5e-19
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
                +V  LL +GA  +  +     PLH A +     +V++LL +  + +  D+   T 
Sbjct: 41  DNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTA 98

Query: 61  LHEAAAKGKTDV 72
           L+ A   G    
Sbjct: 99  LYYAVDSGNMQT 110

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 86.8 bits (216), Expect = 1e-18
 Identities = 21/134 (15%), Positives = 40/134 (29%), Gaps = 23/134 (17%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
                +V Y L+   S        L  +H     GH D++ LLL+   + NT ++  F P
Sbjct: 139 LNDVSIVSYFLSEIPSTFDLAIL-LSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIP 197

Query: 61  -LHEAAAKGKTDVC-------IGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHG 111
            +  A      ++        I IY A            +          + +  +    
Sbjct: 198 DIKLAIDNKDIEMLQALFKYDINIYSANL--------ENVLLD-----DAEIAKMIIEKH 244

Query: 112 ADPFLKNQEGQTPL 125
            +    +      +
Sbjct: 245 VEYKSDSYTKDLDI 258

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 86.8 bits (216), Expect = 1e-18
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 17/121 (14%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDV 1124
               +   AD+   +  + A A     +V  LL  GA  +    +   PL       D  +
Sbjct: 20   SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKI 77

Query: 1125 SDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLA 1171
              +L            +GN+AL  A   GN+  V+  +  +  +      G   T  + A
Sbjct: 78   VKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWK-TSFYHA 136

Query: 1172 A 1172
             
Sbjct: 137  V 137

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 86.0 bits (214), Expect = 2e-18
 Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
            N       + PLH A T    +   IV+ L+  G   ++ + +    ++ A D G++  
Sbjct: 57  KNLLE---NEFPLHQAATL---EDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQT 110

Query: 757 LDTLLRLGAKVNLVDVLG-QTALHRTARDDKTQAVRVLLSHNAD 799
           +   ++   ++      G +T+ +     +    V   LS    
Sbjct: 111 VKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 154

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 83.3 bits (207), Expect = 2e-17
 Identities = 13/119 (10%), Positives = 31/119 (26%), Gaps = 13/119 (10%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL---VREG 1120
            +    +         + +H     G  D++ LLL +    +  N     P  +   +   
Sbjct: 149  LSEIPS-TFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPD-IKLAIDNK 206

Query: 1121 DQDVSDLL--RG---NSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAG 1173
            D ++   L        SA L+     +    + ++                  +     
Sbjct: 207  DIEMLQALFKYDINIYSANLENVLLDDAEIAKMIIEKHVEYKSDSYTKD--LDIVKNNK 263

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 78.0 bits (193), Expect = 1e-15
 Identities = 24/125 (19%), Positives = 38/125 (30%), Gaps = 34/125 (27%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
             +   ++  L S       D  G    + A +  +  +V  LL A A  N  +N    P
Sbjct: 9   TWKSKQLKSFL-SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENE--FP 65

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH+AA    T +              + +                  L  G D    + +
Sbjct: 66  LHQAATLEDTKIV-------------KIL------------------LFSGLDDSQFDDK 94

Query: 121 GQTPL 125
           G T L
Sbjct: 95  GNTAL 99

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 76.4 bits (189), Expect = 3e-15
 Identities = 28/261 (10%), Positives = 67/261 (25%), Gaps = 51/261 (19%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
           PLH A +    ++ ++L+ +G + +  D    T L+ A     ++   L + +       
Sbjct: 65  PLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL--- 121

Query: 277 NCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT 336
             + K+    +                    A    D S V  FL+     F       +
Sbjct: 122 MFYGKTGWKTS-----------------FYHAVMLNDVSIVSYFLSEIPSTFDL-AILLS 163

Query: 337 PLPGTLLIDLLSDDKEFITVAE---EMQATVREHRDNGQSGGYTALQVAGENSKKLLQEP 393
            +        ++     + +     +   +   +           +++A +N        
Sbjct: 164 CI-------HITIKNGHVDMMILLLDYMTSTNTNNSLLFI---PDIKLAIDNKDI----- 208

Query: 394 PSVVDL--------ESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGY 445
             ++           S  LE     D  +   ++                   +      
Sbjct: 209 -EMLQALFKYDINIYSANLENVLLDDAEIAKMIIEKHVEY-KSDSYTKD--LDIVKNNKL 264

Query: 446 NRVAVVEYLLAHGADVHSKDN 466
           + +      L        K N
Sbjct: 265 DEIISKNKELRLMYVNCVKKN 285

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 74.9 bits (185), Expect = 1e-14
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 5/104 (4%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
           + F       T  + AV        +IV   + +          LL+ IH+    GH+D+
Sbjct: 121 LMFYGKTGWKTSFYHAVML---NDVSIVSYFLSEIPS-TFDLAILLSCIHITIKNGHVDM 176

Query: 757 LDTLLRLGAKVNLVDVLGQT-ALHRTARDDKTQAVRVLLSHNAD 799
           +  LL      N  + L     +     +   + ++ L  ++ +
Sbjct: 177 MILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN 220

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 69.9 bits (172), Expect = 5e-13
 Identities = 4/70 (5%), Positives = 21/70 (30%), Gaps = 7/70 (10%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
               ++++ L     +I++                 A++ ++++E      +        
Sbjct: 205 NKDIEMLQALFKYDINIYS-------ANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLD 257

Query: 61  LHEAAAKGKT 70
           + +     + 
Sbjct: 258 IVKNNKLDEI 267

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 61.4 bits (150), Expect = 4e-10
 Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 17/107 (15%)

Query: 1078 FTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL-------- 1128
                       K+  ++  L    D  K +  G +     + + +  +   L        
Sbjct: 2    MDLSR--INTWKSKQLKSFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN 58

Query: 1129 --RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                   L  AA   +   V+ LL +  + +  D +G   T L+ A 
Sbjct: 59   LLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGN--TALYYAV 103

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 58.7 bits (143), Expect = 3e-09
 Identities = 9/101 (8%), Positives = 33/101 (32%), Gaps = 17/101 (16%)

Query: 705 GDTP-LHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
              P +  A+ +   K   ++++L +   ++   N            L   ++   ++  
Sbjct: 194 LFIPDIKLAIDN---KDIEMLQALFKYDINIYSAN-------LENVLLDDAEIAKMIIEK 243

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVS 804
             +           + +  + D+      ++S N +  ++ 
Sbjct: 244 HVEYKSDSYTKDLDIVKNNKLDE------IISKNKELRLMY 278

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 55.2 bits (134), Expect = 4e-08
 Identities = 7/60 (11%), Positives = 20/60 (33%), Gaps = 3/60 (5%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G+            +  +  +    +    D+   +  + A + + + +   LL+ GA  
Sbjct: 1   GMDLSRIN--TWKSKQLKSFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  131 bits (331), Expect = 2e-34
 Identities = 36/215 (16%), Positives = 70/215 (32%), Gaps = 49/215 (22%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           LL+A+  G++ VV + +       +  + +G   T LH A      ++V++L+  GA+V 
Sbjct: 25  LLDAALTGELEVVQQAVKEMNDP-SQPNEEGI--TALHNAICGANYSIVDFLITAGANV- 80

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              N+ D  G+TPLH AA    T +   L +                 G           
Sbjct: 81  ---NSPDSHGWTPLHCAASCNDTVICMAL-VQ---------------HGAA--------- 112

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              + A   +    T                 G+ +    L     ++ + +      L 
Sbjct: 113 ---IFATTLSDGA-TAFEKCD-------PYREGYADCATYLADVEQSMGLMNSGAVYALW 161

Query: 583 EAAAK------ALLQHGADINLKNTDGKTALDLAV 611
           + +A+              +  ++   +T    A 
Sbjct: 162 DYSAEFGDELSFREGESVTVLRRDGPEETDWWWAA 196

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  122 bits (309), Expect = 2e-31
 Identities = 38/204 (18%), Positives = 57/204 (27%), Gaps = 54/204 (26%)

Query: 426 VNCRDLDGRH-STPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGR 484
                    +    L  AA    + VV+  +    D     +  ++ G T LH A     
Sbjct: 11  PRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP----SQPNEEGITALHNAICGAN 66

Query: 485 TQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAG 544
             +   L ++                G +            VN+ D+ G   TPLH AA 
Sbjct: 67  YSIVDFL-IT---------------AGAN------------VNSPDSHGW--TPLHCAA- 95

Query: 545 LVPLHNACSYGHYEVTEMLVKHGANVNVADL-WKFTPLHEAA---------AKALLQHGA 594
                   S     +   LV+HGA +    L    T   +           A  L     
Sbjct: 96  --------SCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQ 147

Query: 595 DINLKNTDGKTALDLAVPCTRAVL 618
            + L N+    AL          L
Sbjct: 148 SMGLMNSGAVYALWDYSAEFGDEL 171

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  114 bits (288), Expect = 1e-28
 Identities = 39/171 (22%), Positives = 55/171 (32%), Gaps = 48/171 (28%)

Query: 451 VEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACK 510
           +  +L           A        L +AA  G  ++     +                +
Sbjct: 1   MRSVLRKAGSPRKARRARLN-PLVLLLDAALTGELEVVQQA-VK---------------E 43

Query: 511 GGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANV 570
             D             +  +  G   T LH         NA    +Y + + L+  GANV
Sbjct: 44  MND------------PSQPNEEGI--TALH---------NAICGANYSIVDFLITAGANV 80

Query: 571 NVADLWKFTPLHEAA-------AKALLQHGADINLKNT-DGKTALDLAVPC 613
           N  D   +TPLH AA         AL+QHGA I      DG TA +   P 
Sbjct: 81  NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPY 131

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 99.3 bits (248), Expect = 2e-23
 Identities = 38/247 (15%), Positives = 66/247 (26%), Gaps = 51/247 (20%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADI 596
            LV L +A   G  EV +  VK   + +  +    T LH A           L+  GA++
Sbjct: 21  PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80

Query: 597 NLKNTDGKTALDLAVPCTRAVLSGDHKK--EELLEAARMMGGGLHRYTWPLGTTDIGWCS 654
           N  ++ G T L  A  C       +       L++     G  +   T   G T    C 
Sbjct: 81  NSPDSHGWTPLHCAASC-------NDTVICMALVQH----GAAIFATTLSDGATAFEKCD 129

Query: 655 CCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT-GDTPLHCAV 713
                            +G+   +            +L     +     +     L    
Sbjct: 130 PY--------------REGY--AD---------CATYLADVEQSMGLMNSGAVYALWDYS 164

Query: 714 TSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLD-VLDTLLRLGAKVNLVDV 772
                +    +     +   +  ++         AA  G    V      L  +V     
Sbjct: 165 A----EFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQRS 220

Query: 773 LGQTALH 779
             +   H
Sbjct: 221 KVKHHHH 227

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 95.4 bits (238), Expect = 5e-22
 Identities = 33/149 (22%), Positives = 50/149 (33%), Gaps = 39/149 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  +VV+  +         ++ G+  LHNA    +  +V  L+ A AN N+ D+  +TP
Sbjct: 31  TGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTP 90

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKN- 118
           LH AA+   T +C                                  L  HGA  F    
Sbjct: 91  LHCAASCNDTVIC--------------------------------MALVQHGAAIFATTL 118

Query: 119 QEGQTPLDLTV-----AEDVRSLLQDAMA 142
            +G T  +          D  + L D   
Sbjct: 119 SDGATAFEKCDPYREGYADCATYLADVEQ 147

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 89.6 bits (223), Expect = 4e-20
 Identities = 30/185 (16%), Positives = 49/185 (26%), Gaps = 50/185 (27%)

Query: 406 ASKGGDMTVVTRLLSSCPH--IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHS 463
           A  G + ++V  L++       VN  D  G   TPLH AA  N   +   L+ HGA + +
Sbjct: 61  AICGANYSIVDFLIT---AGANVNSPDSHGW--TPLHCAASCNDTVICMALVQHGAAIFA 115

Query: 464 KDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNP 523
                   G T   +                               + G       L + 
Sbjct: 116 TT---LSDGATAFEKCD---------------------------PYREGYADCATYLADV 145

Query: 524 Q-TVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
           + ++   ++       L             S    +           V   D  + T   
Sbjct: 146 EQSMGLMNSGAV--YALWDY----------SAEFGDELSFREGESVTVLRRDGPEETDWW 193

Query: 583 EAAAK 587
            AA  
Sbjct: 194 WAALH 198

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 86.2 bits (214), Expect = 7e-19
 Identities = 42/268 (15%), Positives = 68/268 (25%), Gaps = 65/268 (24%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            LV L +A   G  EV +  +K   + +  +    T LH A   +   +   L++ GA+ 
Sbjct: 21  PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTS---DVVNFKH 330
              + H  + +  A                     C           L       +    
Sbjct: 81  NSPDSHGWTPLHCAA-----------SCND--TVIC---------MALVQHGAA-IFATT 117

Query: 331 PYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLL 390
              G T        +     +E         A V +      SG   AL      S +  
Sbjct: 118 LSDGATAF------EKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDY---SAEFG 168

Query: 391 QEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAV 450
            E           L   +G  +T            V  RD      T   +AA + +   
Sbjct: 169 DE-----------LSFREGESVT------------VLRRDGPEE--TDWWWAALHGQEGY 203

Query: 451 VE-YLLAHGADVHSKDNATDKWGFTPLH 477
           V          V  + +          H
Sbjct: 204 VPRNYFGLFPRVKPQRSKVK----HHHH 227

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 85.8 bits (213), Expect = 8e-19
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 3/100 (3%)

Query: 700 KHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDT 759
           +        L  A  +       +V+  +++    ++ N+E +  +H A    +  ++D 
Sbjct: 16  RARLNPLVLLLDAALT---GELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDF 72

Query: 760 LLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           L+  GA VN  D  G T LH  A  + T     L+ H A 
Sbjct: 73  LITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAA 112

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 1064 VKHGANVNVADLWKFTP---LHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VRE 1119
            ++   +   A   +  P   L +AA  G+ ++V+  ++   DPS+ N +G T L   +  
Sbjct: 5    LRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICG 64

Query: 1120 GDQDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNST 1166
             +  + D L             G + L  AA   +      L+     I          T
Sbjct: 65   ANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGA-T 123

Query: 1167 PLHLAAGEKR-HLLM 1180
                    +  +   
Sbjct: 124  AFEKCDPYREGYADC 138

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 78.1 bits (193), Expect = 4e-16
 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 9/137 (6%)

Query: 668 KDEFKG-HCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVE 725
           +        LL+A   G+   V++ +      +  +   G T LH A+        +IV+
Sbjct: 16  RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEE-GITALHNAICG---ANYSIVD 71

Query: 726 SLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDV-LGQTALHRTARD 784
            LI  GA++N  +     P+H AA      +   L++ GA +    +  G TA  +    
Sbjct: 72  FLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPY 131

Query: 785 DKTQA--VRVLLSHNAD 799
            +  A     L      
Sbjct: 132 REGYADCATYLADVEQS 148

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 77.3 bits (191), Expect = 7e-16
 Identities = 18/133 (13%), Positives = 40/133 (30%), Gaps = 12/133 (9%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD-NWNFT 59
                +V++L+ +GA++++ D  G  PLH A S     +   L++  A       +   T
Sbjct: 64  GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGAT 123

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLA-------HGA 112
              +     +       Y A+            G      +    + +            
Sbjct: 124 AFEKCDPYREGYADCATYLADVEQSMGL--MNSGAVY--ALWDYSAEFGDELSFREGESV 179

Query: 113 DPFLKNQEGQTPL 125
               ++   +T  
Sbjct: 180 TVLRRDGPEETDW 192

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 74.2 bits (183), Expect = 8e-15
 Identities = 17/86 (19%), Positives = 25/86 (29%), Gaps = 1/86 (1%)

Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPL 61
           G  D   YL     S+   + G ++ L +  +    D +            RD    T  
Sbjct: 134 GYADCATYLADVEQSMGLMNSGAVYALWDYSA-EFGDELSFREGESVTVLRRDGPEETDW 192

Query: 62  HEAAAKGKTDVCIGIYFAEHSSKSNQ 87
             AA  G+       YF        Q
Sbjct: 193 WWAALHGQEGYVPRNYFGLFPRVKPQ 218

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 71.9 bits (177), Expect = 4e-14
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 724 VESLIRKGAHLNEKNKEL---LAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHR 780
           + S++RK     +  +     L  +  AA  G L+V+   ++     +  +  G TALH 
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHN 60

Query: 781 TARDDKTQAVRVLLSHNAD 799
                    V  L++  A+
Sbjct: 61  AICGANYSIVDFLITAGAN 79

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 68.4 bits (168), Expect = 7e-13
 Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 7/98 (7%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN-KELLAPIHLAADL--GHLDVLDTLL 761
           G TPLHCA +        I  +L++ GA +      +             G+ D    L 
Sbjct: 87  GWTPLHCAASC---NDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLA 143

Query: 762 RLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            +   + L++     AL   + +     +      +  
Sbjct: 144 DVEQSMGLMNSGAVYALWDYSAEF-GDELSFREGESVT 180

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 60.7 bits (148), Expect = 3e-10
 Identities = 18/113 (15%), Positives = 26/113 (23%), Gaps = 27/113 (23%)

Query: 1064 VKHGANVNVADL-WKFTPLHEAAA--KGKADIVRLLLQHGADPSKKNRDGATPLDLVREG 1120
            V+HGA +    L    T   +     +G AD    L          N             
Sbjct: 107  VQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYA------- 159

Query: 1121 DQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                         L D + +     +         +  RD      T    AA
Sbjct: 160  -------------LWDYSAE-FGDELSFREGESVTVLRRDGPEE--TDWWWAA 196

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 60.4 bits (147), Expect = 5e-10
 Identities = 11/94 (11%), Positives = 18/94 (19%), Gaps = 2/94 (2%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
           +       G T                   L      +   N   +  +   +     D 
Sbjct: 113 IFATTLSDGATAFEKCDPY-REGYADCATYLADVEQSMGLMNSGAVYALWDYSA-EFGDE 170

Query: 757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAV 790
           L         V   D   +T     A   +   V
Sbjct: 171 LSFREGESVTVLRRDGPEETDWWWAALHGQEGYV 204

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 55.0 bits (133), Expect = 3e-08
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 20/81 (24%)

Query: 1093 VRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTA 1152
            +R +L+    P K  R    PL                   LLDAA  G L  VQ+ +  
Sbjct: 1    MRSVLRKAGSPRKARRARLNPL-----------------VLLLDAALTGELEVVQQAVKE 43

Query: 1153 D-NINCRDAQGRNSTPLHLAA 1172
              + +  + +G   T LH A 
Sbjct: 44   MNDPSQPNEEGI--TALHNAI 62

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 51.5 bits (124), Expect = 4e-07
 Identities = 10/108 (9%), Positives = 26/108 (24%), Gaps = 21/108 (19%)

Query: 1062 HNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGD 1121
            +      ++ + +      L + +A+   D +           +++    T         
Sbjct: 141  YLADVEQSMGLMNSGAVYALWDYSAEF-GDELSFREGESVTVLRRDGPEETDWWW----- 194

Query: 1122 QDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLH 1169
                           AA  G  G V +         +  + +     H
Sbjct: 195  ---------------AALHGQEGYVPRNYFGLFPRVKPQRSKVKHHHH 227

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 7/59 (11%), Positives = 14/59 (23%), Gaps = 7/59 (11%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGR 484
           +   +        L   +       + +       V  +D        T    AA  G+
Sbjct: 149 MGLMNSGAV--YALWDYS-AEFGDELSFREGESVTVLRRDGP----EETDWWWAALHGQ 200

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 42.2 bits (100), Expect = 4e-04
 Identities = 15/90 (16%), Positives = 21/90 (23%), Gaps = 36/90 (40%)

Query: 40  VRLLLEADANPNTRDNWNFTP---LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGT 96
           +R +L    +P         P   L +AA  G                            
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTG---------------------------- 32

Query: 97  GCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                 +          DP   N+EG T L
Sbjct: 33  ----ELEVVQQAVKEMNDPSQPNEEGITAL 58

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  125 bits (318), Expect = 7e-34
 Identities = 40/172 (23%), Positives = 63/172 (36%), Gaps = 49/172 (28%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           + R  T LH A+    +  VEYLL +G+D     N  D  G+TPLHEA   G  ++  LL
Sbjct: 7   NHRGETLLHIASIKGDIPSVEYLLQNGSDP----NVKDHAGWTPLHEACNHGHLKVVELL 62

Query: 492 PLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNA 551
            L                                VN         +PLH AA        
Sbjct: 63  -LQ---------------HKAL------------VNTTGYQND--SPLHDAA-------- 84

Query: 552 CSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAK------ALLQHGADIN 597
              GH ++ ++L+ +GA+ N  +++   P+     +       L +     +
Sbjct: 85  -KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSS 135

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  123 bits (312), Expect = 5e-33
 Identities = 46/160 (28%), Positives = 59/160 (36%), Gaps = 51/160 (31%)

Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKV 517
           G D       T+  G T LH A+ KG       L L                 G D    
Sbjct: 1   GIDP-----FTNHRGETLLHIASIKGDIPSVEYL-LQ---------------NGSD---- 35

Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK 577
                    N +D AG             PLH AC++GH +V E+L++H A VN      
Sbjct: 36  --------PNVKDHAGW-----------TPLHEACNHGHLKVVELLLQHKALVNTTGYQN 76

Query: 578 FTPLHEAA-------AKALLQHGADINLKNTDGKTALDLA 610
            +PLH+AA        K LL +GA  N  N  G   +D  
Sbjct: 77  DSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYT 116

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  111 bits (281), Expect = 7e-29
 Identities = 44/138 (31%), Positives = 58/138 (42%), Gaps = 31/138 (22%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G    VEYLL +G+  + +D  G  PLH AC+ GH  VV LLL+  A  NT    N +P
Sbjct: 20  KGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH+AA  G  D+                                   L++GA     N  
Sbjct: 80  LHDAAKNGHVDIV-------------------------------KLLLSYGASRNAVNIF 108

Query: 121 GQTPLDLTVAEDVRSLLQ 138
           G  P+D T  E ++SLL 
Sbjct: 109 GLRPVDYTDDESMKSLLL 126

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 96.0 bits (240), Expect = 2e-23
 Identities = 27/74 (36%), Positives = 39/74 (52%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PLH AC++GH +V E+L++  A VN       +PLH+AA    +++  LLLS GA  
Sbjct: 43  GWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASR 102

Query: 274 TLHNCHSKSAIDVA 287
              N      +D  
Sbjct: 103 NAVNIFGLRPVDYT 116

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 93.6 bits (234), Expect = 2e-22
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADI 596
           G   LH A   G     E L+++G++ NV D   +TPLHEA         + LLQH A +
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV 69

Query: 597 NLKNTDGKTALDLAV 611
           N       + L  A 
Sbjct: 70  NTTGYQNDSPLHDAA 84

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 87.5 bits (218), Expect = 2e-20
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++H A VN       +PLH+AA  G  DIV+LLL +GA  +  N  G  P+D    E  +
Sbjct: 63   LQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMK 122

Query: 1123 DVSDLLRGNSA 1133
             +  L   N +
Sbjct: 123  SLLLLPEKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 86.7 bits (216), Expect = 4e-20
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 23/112 (20%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +++G++ NV D   +TPLHEA   G   +V LLLQH A  +       +P          
Sbjct: 30   LQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP---------- 79

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGE 1174
                      L DAAK G++  V+ LL+   + N  +  G    P+     E
Sbjct: 80   ----------LHDAAKNGHVDIVKLLLSYGASRNAVNIFGL--RPVDYTDDE 119

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 85.9 bits (214), Expect = 8e-20
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G+T LH A           VE L++ G+  N K+     P+H A + GHL V++ LL+  
Sbjct: 10  GETLLHIASIK---GDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK 66

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A VN       + LH  A++     V++LLS+ A 
Sbjct: 67  ALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGAS 101

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 82.5 bits (205), Expect = 1e-18
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 5/124 (4%)

Query: 679 ACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEK 737
           A  +GD   V+  L +    N K  + G TPLH A          +VE L++  A +N  
Sbjct: 17  ASIKGDIPSVEYLLQNGSDPNVKD-HAGWTPLHEAC---NHGHLKVVELLLQHKALVNTT 72

Query: 738 NKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN 797
             +  +P+H AA  GH+D++  LL  GA  N V++ G   +  T  +     + +   + 
Sbjct: 73  GYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132

Query: 798 ADTS 801
           + ++
Sbjct: 133 SSSA 136

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 80.2 bits (199), Expect = 8e-18
 Identities = 22/59 (37%), Positives = 29/59 (49%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G   LH A   G     E L++ G++ N  D   +TPLHEA +   L+V  LLL   A 
Sbjct: 10  GETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL 68

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 71.3 bits (176), Expect = 9e-15
 Identities = 14/56 (25%), Positives = 29/56 (51%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           PLH+A   GH ++ ++L+  GA+ NA++++   P+     +S   +  L     + 
Sbjct: 79  PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 60.9 bits (149), Expect = 4e-11
 Identities = 13/52 (25%), Positives = 26/52 (50%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNT 52
            G  D+V+ LL+ GAS +A +  GL P+          ++ L  + +++  +
Sbjct: 86  NGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 5/39 (12%), Positives = 18/39 (46%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGAD 1102
            + +GA+ N  +++   P+     +    ++ L  ++ + 
Sbjct: 96   LSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 42.8 bits (102), Expect = 8e-05
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G +    +    T LH A+ K  +     LL  G+DP
Sbjct: 1   GIDPFT-NHRGETLLHIASIKGDIPSVEYLLQNGSDP 36

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  122 bits (310), Expect = 6e-33
 Identities = 66/170 (38%), Positives = 79/170 (46%), Gaps = 52/170 (30%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           +GR  TPLH AA    + VV+ LL  GADV    NA DK G TPLH AA+ G  ++  LL
Sbjct: 1   NGR--TPLHLAARNGHLEVVKLLLEAGADV----NAKDKNGRTPLHLAARNGHLEVVKLL 54

Query: 492 PLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNA 551
            L                 G D            VNA+D  GR  TPLH AA        
Sbjct: 55  -LE---------------AGAD------------VNAKDKNGR--TPLHLAA-------- 76

Query: 552 CSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGA 594
              GH EV ++L++ GA+VN  D    TPLH AA        K LL+ GA
Sbjct: 77  -RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  101 bits (255), Expect = 2e-25
 Identities = 54/146 (36%), Positives = 68/146 (46%), Gaps = 46/146 (31%)

Query: 472 GFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT 531
           G TPLH AA+ G  ++  LL L                 G D            VNA+D 
Sbjct: 2   GRTPLHLAARNGHLEVVKLL-LE---------------AGAD------------VNAKDK 33

Query: 532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA------ 585
            GR  TPLH AA           GH EV ++L++ GA+VN  D    TPLH AA      
Sbjct: 34  NGR--TPLHLAA---------RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82

Query: 586 -AKALLQHGADINLKNTDGKTALDLA 610
             K LL+ GAD+N K+ +G+T L LA
Sbjct: 83  VVKLLLEAGADVNAKDKNGRTPLHLA 108

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 92.4 bits (231), Expect = 3e-22
 Identities = 34/72 (47%), Positives = 45/72 (62%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  +VV+ LL +GA ++A+D  G  PLH A   GH +VV+LLLEA A+ N +D    TP
Sbjct: 45  NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTP 104

Query: 61  LHEAAAKGKTDV 72
           LH AA  G  +V
Sbjct: 105 LHLAARNGHLEV 116

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 92.4 bits (231), Expect = 3e-22
 Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 31/125 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  +VV+ LL +GA ++A+D  G  PLH A   GH +VV+LLLEA A+ N +D    TP
Sbjct: 12  NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTP 71

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH AA  G  +V                                   L  GAD   K++ 
Sbjct: 72  LHLAARNGHLEVV-------------------------------KLLLEAGADVNAKDKN 100

Query: 121 GQTPL 125
           G+TPL
Sbjct: 101 GRTPL 105

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 87.4 bits (218), Expect = 2e-20
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 23/110 (20%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            ++ GA+VN  D    TPLH AA  G  ++V+LLL+ GAD + K+++G TPL L       
Sbjct: 22   LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL------- 74

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                         AA+ G+L  V+ LL A  ++N +D  GR  TPLHLAA
Sbjct: 75   -------------AARNGHLEVVKLLLEAGADVNAKDKNGR--TPLHLAA 109

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 85.5 bits (213), Expect = 8e-20
 Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPLH A  +       +V+ L+  GA +N K+K    P+HLAA  GHL+V+  LL  G
Sbjct: 2   GRTPLHLAARN---GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 58

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A VN  D  G+T LH  AR+   + V++LL   AD
Sbjct: 59  ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 93

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 82.8 bits (206), Expect = 7e-19
 Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 3/94 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPLH A          +V+ L+  GA +N K+K    P+HLAA  GHL+V+  LL  G
Sbjct: 35  GRTPLHLAA---RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           A VN  D  G+T LH  AR+   + V++LL   A
Sbjct: 92  ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 79.3 bits (197), Expect = 1e-17
 Identities = 31/56 (55%), Positives = 36/56 (64%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           PLH A   GH EV ++L++AGA+VNA D    TPLH AA    LEV  LLL  GAD
Sbjct: 38  PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 93

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 78.2 bits (194), Expect = 3e-17
 Identities = 31/56 (55%), Positives = 36/56 (64%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           PLH A   GH EV ++L++AGA+VNA D    TPLH AA    LEV  LLL  GAD
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 75.1 bits (186), Expect = 4e-16
 Identities = 30/55 (54%), Positives = 35/55 (63%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
           PLH A   GH EV ++L++AGA+VNA D    TPLH AA    LEV  LLL  GA
Sbjct: 71  PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 72.4 bits (179), Expect = 4e-15
 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++ GA+VN  D    TPLH AA  G  ++V+LLL+ GAD + K+++G TPL L  R G  
Sbjct: 55   LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 114

Query: 1123 DVSDLL 1128
            +V  LL
Sbjct: 115  EVVKLL 120

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 66.2 bits (163), Expect = 4e-13
 Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 33/100 (33%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSN 86
           PLH A   GH +VV+LLLEA A+ N +D    TPLH AA  G  +V       +      
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV------VK------ 52

Query: 87  QYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                                L   GAD   K++ G+TPL
Sbjct: 53  --------------------LLLEAGADVNAKDKNGRTPL 72

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 62.4 bits (153), Expect = 9e-12
 Identities = 24/48 (50%), Positives = 32/48 (66%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADA 48
            G  +VV+ LL +GA ++A+D  G  PLH A   GH +VV+LLLEA A
Sbjct: 78  NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 54.7 bits (133), Expect = 6e-09
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGA 1101
            ++ GA+VN  D    TPLH AA  G  ++V+LLL+ GA
Sbjct: 88   LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  125 bits (316), Expect = 3e-32
 Identities = 42/253 (16%), Positives = 70/253 (27%), Gaps = 63/253 (24%)

Query: 375 GYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGR 434
           G T L  A  N +  +      +     LL+       +   + L +           G 
Sbjct: 43  GKTCLMKAVLNLQDGVNA---CIMP---LLQI---DKDSGNPKPLVNAQ--CTDEFYQGH 91

Query: 435 HSTPLHFAAGYNRVAVVEYLLAHGADVHSKDN---------ATDKWGFTPLHEAAQKGRT 485
               LH A     +  V+ L+ +GADVH +               +G  PL  AA   + 
Sbjct: 92  S--ALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQW 149

Query: 486 QLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAA-- 543
            +   L                         ++    P ++ A D+ G   T LH     
Sbjct: 150 DVVTYL-------------------------LENPHQPASLEATDSLGN--TVLHALVMI 182

Query: 544 -----GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQ 591
                    L      G  ++   L        +++    TPL  AA        + +LQ
Sbjct: 183 ADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242

Query: 592 HGADINLKNTDGK 604
                   +    
Sbjct: 243 REFSGAAAHHHHH 255

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 96.8 bits (241), Expect = 2e-22
 Identities = 43/231 (18%), Positives = 66/231 (28%), Gaps = 62/231 (26%)

Query: 403 LLEASKGGDMTVVTRLL-------SSCPHIVNCRDLDGRHSTPLHFAA---GYNRVAVVE 452
           L      G    +T LL                    G+  T L  A         A + 
Sbjct: 6   LFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGK--TCLMKAVLNLQDGVNACIM 63

Query: 453 YLLAHGAD-------VHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLREL 505
            LL    D       V+++       G + LH A +K   Q   LL +            
Sbjct: 64  PLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLL-VE----------- 111

Query: 506 FEACKGGDLTKVKKLVNPQTVNARDTAG--RKSTPLHFAAGLVPLHNACSYGHYEVTEML 563
                G D            V+ R      +K     F  G +PL  A     ++V   L
Sbjct: 112 ----NGAD------------VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL 155

Query: 564 VKHG---ANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAV 611
           +++    A++   D    T LH     A           N+   +AL + +
Sbjct: 156 LENPHQPASLEATDSLGNTVLHALVMIA----------DNSPENSALVIHM 196

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 92.5 bits (230), Expect = 7e-21
 Identities = 35/205 (17%), Positives = 55/205 (26%), Gaps = 58/205 (28%)

Query: 437 TPLHFAAGYNRVAVV----EYLLAHGADVHSKDNATDKWGFTPLHEAA---QKGRTQLSA 489
             L           +    EYL  +   +          G T L +A    Q G      
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIM 63

Query: 490 LLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLH 549
            L L     +   + L  A                        G              LH
Sbjct: 64  PL-LQIDKDSGNPKPLVNA----------------QCTDEFYQGHS-----------ALH 95

Query: 550 NACSYGHYEVTEMLVKHGANVNVADLWKF-------------TPLHEAA-------AKAL 589
            A      +  ++LV++GA+V++    +F              PL  AA          L
Sbjct: 96  IAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL 155

Query: 590 LQHG---ADINLKNTDGKTALDLAV 611
           L++    A +   ++ G T L   V
Sbjct: 156 LENPHQPASLEATDSLGNTVLHALV 180

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 85.6 bits (212), Expect = 2e-18
 Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 23/128 (17%)

Query: 1064 VKHGANVNVADLWKF-------------TPLHEAAAKGKADIVRLLLQHG---ADPSKKN 1107
            V++GA+V++    +F              PL  AA   + D+V  LL++    A     +
Sbjct: 110  VENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATD 169

Query: 1108 RDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNST 1166
              G T L  +     +       NSAL+     G L    +L          + QG   T
Sbjct: 170  SLGNTVLHALVMIADNS----PENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGL--T 223

Query: 1167 PLHLAAGE 1174
            PL LAA E
Sbjct: 224  PLKLAAKE 231

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 85.6 bits (212), Expect = 2e-18
 Identities = 29/142 (20%), Positives = 38/142 (26%), Gaps = 33/142 (23%)

Query: 1   YGRKDVVEYLLASGASIHARDDG-------------GLHPLHNACSFGHADVVRLLLE-- 45
                 V+ L+ +GA +H R  G             G  PL  A      DVV  LLE  
Sbjct: 100 KRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159

Query: 46  -ADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDR 104
              A+    D+   T LH                A      +                  
Sbjct: 160 HQPASLEATDSLGNTVLHALVMIADNSPE---NSALVIHMYD-------------GLLQM 203

Query: 105 SCYL-AHGADPFLKNQEGQTPL 125
              L        + N +G TPL
Sbjct: 204 GARLCPTVQLEEISNHQGLTPL 225

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 80.2 bits (198), Expect = 1e-16
 Identities = 43/272 (15%), Positives = 68/272 (25%), Gaps = 74/272 (27%)

Query: 212 ALGLVPLHNA---CSYGHFEVTEMLIKAG-----------ANVNAMDLWQFTPLHEAASK 257
           + G   L  A      G       L++             A          + LH A  K
Sbjct: 41  STGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEK 100

Query: 258 SRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRV 317
             L+   LL+  GAD                  +  Q     F    L  A         
Sbjct: 101 RSLQCVKLLVENGAD--------VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQW--- 149

Query: 318 KKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYT 377
                 DVV                L++                A++    D+    G T
Sbjct: 150 ------DVVT--------------YLLE-----------NPHQPASLEA-TDS---LGNT 174

Query: 378 ALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHST 437
            L      +    +           L+     G + +  RL  +        +  G   T
Sbjct: 175 VLHALVMIADNSPENSA--------LVIHMYDGLLQMGARLCPTVQL-EEISNHQGL--T 223

Query: 438 PLHFAAGYNRVAVVEYLL---AHGADVHSKDN 466
           PL  AA   ++ +  ++L     GA  H   +
Sbjct: 224 PLKLAAKEGKIEIFRHILQREFSGAAAHHHHH 255

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 76.0 bits (187), Expect = 4e-15
 Identities = 30/163 (18%), Positives = 51/163 (31%), Gaps = 36/163 (22%)

Query: 671 FKGHCLLEACRQGDPSRVK----------KFLTSDVVNFKHPYTGDTPLHCAVTSPYPKR 720
           F    L     +G P  +           K+LT     +    TG T L  AV +     
Sbjct: 1   FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSA--YTEGSTGKTCLMKAVLNLQDGV 58

Query: 721 KAIVESLIRKG-----------AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNL 769
            A +  L++             A   ++  +  + +H+A +   L  +  L+  GA V+L
Sbjct: 59  NACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118

Query: 770 VD-------------VLGQTALHRTARDDKTQAVRVLLSHNAD 799
                            G+  L   A   +   V  LL +   
Sbjct: 119 RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 75.6 bits (186), Expect = 4e-15
 Identities = 39/289 (13%), Positives = 74/289 (25%), Gaps = 67/289 (23%)

Query: 503 RELFEACKGGDLTKVKKLVN---------PQTVNARDTAGRKSTPLHFAAGLVPLHNACS 553
             LF     G   ++  L+            +     + G+  T L  A           
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGK--TCLMKAV------LNLQ 55

Query: 554 YGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPC 613
            G       L++   +                        A    +   G +AL +A+  
Sbjct: 56  DGVNACIMPLLQIDKDSGNPKPLV---------------NAQCTDEFYQGHSALHIAI-- 98

Query: 614 TRAVLSGDHKKEELL--------EAARMMGGGLHRYTWP-LGTTDIGWCSCCCKMELMFM 664
                    +  +LL          A       H+ T    G   +   +C  + +++  
Sbjct: 99  ----EKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVV-- 152

Query: 665 PRIKDEFKGHCLLEACRQG-DPSRVKKF----LTSDVVNFKHPYTGDTPLHCAVTSPYPK 719
                      LLE   Q              L + V+        ++ L   +   Y  
Sbjct: 153 ---------TYLLENPHQPASLEATDSLGNTVLHALVMI-ADNSPENSALVIHM---YDG 199

Query: 720 RKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVN 768
              +   L          N + L P+ LAA  G +++   +L+      
Sbjct: 200 LLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 74.8 bits (184), Expect = 9e-15
 Identities = 43/291 (14%), Positives = 78/291 (26%), Gaps = 71/291 (24%)

Query: 217 PLHNACSYGHFEVTEMLIK--------AGANVNAMDLWQFTPLHEAASKSR---LEVCSL 265
            L +  S G  E    L++           +         T L +A    +         
Sbjct: 5   RLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMP 64

Query: 266 LLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV 325
           LL    D    + + K  ++   T E             L  A  +     VK       
Sbjct: 65  LLQIDKD----SGNPKPLVNAQCTDE------FYQGHSALHIAIEKRSLQCVK------- 107

Query: 326 VNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGEN 385
                           LL++    D              ++H+      G   L +A   
Sbjct: 108 ----------------LLVE-NGADVH----LRACGRFFQKHQGTCFYFGELPLSLAACT 146

Query: 386 SKK-----LLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLH 440
            +      LL+ P     LE+        G+    T L     H +     +   ++ L 
Sbjct: 147 KQWDVVTYLLENPHQPASLEAT----DSLGN----TVL-----HALVMIADNSPENSALV 193

Query: 441 FAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
                  + +   L             ++  G TPL  AA++G+ ++   +
Sbjct: 194 IHMYDGLLQMGARLCPTVQLE----EISNHQGLTPLKLAAKEGKIEIFRHI 240

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 74.1 bits (182), Expect = 1e-14
 Identities = 38/285 (13%), Positives = 68/285 (23%), Gaps = 75/285 (26%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTA 606
            L +  S G  E    L+++    N   L                       + + GKT 
Sbjct: 5   RLFSVVSRGVPEELTGLLEYLRW-NSKYL-----------------TDSAYTEGSTGKTC 46

Query: 607 LDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPR 666
           L  AV          + ++ +      +   L           +    C  +        
Sbjct: 47  LMKAVL---------NLQDGVNACIMPL---LQIDKDSGNPKPLVNAQCTDE-------- 86

Query: 667 IKDEFKGHCLLEACRQGDPSRVKKFL-------------TSDVVNFKHPYTGDTPLHCAV 713
                    L  A  +     VK  +                       Y G+ PL  A 
Sbjct: 87  --FYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAA 144

Query: 714 TSPYPKRKAIVESLIRKG-------------------AHLNEKNKELLAPIHLAADLGHL 754
                K+  +V  L+                        +   N    + + +    G L
Sbjct: 145 ---CTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLL 201

Query: 755 DVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            +   L        + +  G T L   A++ K +  R +L     
Sbjct: 202 QMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 73.7 bits (181), Expect = 2e-14
 Identities = 23/111 (20%), Positives = 33/111 (29%), Gaps = 13/111 (11%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVS 1125
              A          + LH A  K     V+LL+++GAD   +                  +
Sbjct: 79   VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKH-------QGT 131

Query: 1126 DLLRGNSALLDAAKKGNLGRVQKLLTAD----NINCRDAQGRNSTPLHLAA 1172
                G   L  AA       V  LL       ++   D+ G   T LH   
Sbjct: 132  CFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGN--TVLHALV 180

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 73.3 bits (180), Expect = 3e-14
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 19/91 (20%)

Query: 1   YGRKDVVEYLLASG---ASIHARDDGG---LH-------------PLHNACSFGHADVVR 41
             + DVV YLL +    AS+ A D  G   LH              L      G   +  
Sbjct: 146 TKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGA 205

Query: 42  LLLEADANPNTRDNWNFTPLHEAAAKGKTDV 72
            L          ++   TPL  AA +GK ++
Sbjct: 206 RLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 62.9 bits (153), Expect = 8e-11
 Identities = 28/132 (21%), Positives = 39/132 (29%), Gaps = 35/132 (26%)

Query: 703 YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLA-------------PIHLAA 749
           Y G + LH A+     +    V+ L+  GA ++ +                   P+ LAA
Sbjct: 88  YQGHSALHIAIEK---RSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAA 144

Query: 750 DLGHLDVLDTLLRLG---AKVNLVDVLGQTALH----------------RTARDDKTQAV 790
                DV+  LL      A +   D LG T LH                    D   Q  
Sbjct: 145 CTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG 204

Query: 791 RVLLSHNADTSI 802
             L        I
Sbjct: 205 ARLCPTVQLEEI 216

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 61.3 bits (149), Expect = 3e-10
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWN 57
            G   +   L  +       +  GL PL  A   G  ++ R +L+ + +     + +
Sbjct: 198 DGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHHH 254

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 57.1 bits (138), Expect = 8e-09
 Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 20/85 (23%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVS 1125
            H   +   +  + + L      G   +   L          N  G TPL L         
Sbjct: 177  HALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKL--------- 227

Query: 1126 DLLRGNSALLDAAKKGNLGRVQKLL 1150
                       AAK+G +   + +L
Sbjct: 228  -----------AAKEGKIEIFRHIL 241

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 54.8 bits (132), Expect = 4e-08
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKN 1107
                    +++    TPL  AA +GK +I R +LQ     +  +
Sbjct: 208  CPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAH 251

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 54.0 bits (130), Expect = 9e-08
 Identities = 28/167 (16%), Positives = 40/167 (23%), Gaps = 46/167 (27%)

Query: 4   KDVVEYLLASGA----SIHARDDGGLHPLHNA---CSFGHADVVRLLLEA---------- 46
             ++EYL  +      S +     G   L  A      G    +  LL+           
Sbjct: 19  TGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78

Query: 47  -DANPNTRDNWNFTPLHEAAAKGKTDV--------------CIGIYFAEHSSKSNQYVYG 91
            +A          + LH A  K                     G +F +H      +   
Sbjct: 79  VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYF--- 135

Query: 92  IGGGT-----GCPMHKDRSCYL----AHGADPFLKNQEGQTPLDLTV 129
             G        C    D   YL       A     +  G T L   V
Sbjct: 136 --GELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALV 180

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 44.8 bits (106), Expect = 8e-05
 Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 24/112 (21%)

Query: 1079 TPLHEAAAKGKADIVRLLLQH--------GADPSKKNRDGATPL----DLVREGDQDVSD 1126
              L    ++G  + +  LL++              +   G T L      +++G      
Sbjct: 4    DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIM 63

Query: 1127 LLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHL 1178
                   LL   K        K L          QG +   LH+A  EKR L
Sbjct: 64   P------LLQIDKDSG---NPKPLVNAQCTDEFYQGHS--ALHIAI-EKRSL 103

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  122 bits (308), Expect = 6e-32
 Identities = 31/214 (14%), Positives = 50/214 (23%), Gaps = 51/214 (23%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           +  A+  G       L                    L       R  +  +L+  GAD+ 
Sbjct: 10  VSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI- 68

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
               +  K G T      Q G   ++    L         +   E  KG D         
Sbjct: 69  ---KSRTKEGTTLFFPLFQGGGNDITGTTEL--------CKIFLE--KGAD--------- 106

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEM-------LVKHGANVNVADL 575
              + A     +    +                  +  EM         + G  + + D 
Sbjct: 107 ---ITALYKPYK--IVVFKNI---------FNYFVDENEMIPLYKLIFSQSGLQLLIKDK 152

Query: 576 WKFTPLHEAA-------AKALLQHGADINLKNTD 602
           W  T L            K +  +    NLK   
Sbjct: 153 WGLTALEFVKRCQKPIALKMMEDYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  110 bits (276), Expect = 1e-27
 Identities = 25/195 (12%), Positives = 49/195 (25%), Gaps = 60/195 (30%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPS 496
             +  AA          L   G +   +        +  L     + R ++S  L ++  
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKGYED-KESVLKSNILYDVLRNNNDEARYKISMFL-IN-- 63

Query: 497 AANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGH 556
                        KG D            + +R   G   T                 G 
Sbjct: 64  -------------KGAD------------IKSRTKEGT--TLFFPLF---------QGGG 87

Query: 557 ------YEVTEMLVKHGANVNVADLWKFTPLHEAAAKA--------------LLQHGADI 596
                  E+ ++ ++ GA++          + +                     Q G  +
Sbjct: 88  NDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL 147

Query: 597 NLKNTDGKTALDLAV 611
            +K+  G TAL+   
Sbjct: 148 LIKDKWGLTALEFVK 162

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 97.4 bits (243), Expect = 3e-23
 Identities = 20/129 (15%), Positives = 35/129 (27%), Gaps = 20/129 (15%)

Query: 496 SAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYG 555
           S A    R +  A   G      +L      +         + + +      L N     
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLK---SNILYDV----LRNNNDEA 53

Query: 556 HYEVTEMLVKHGANVNVADLWKFTPLHEAA-------------AKALLQHGADINLKNTD 602
            Y+++  L+  GA++        T                    K  L+ GADI      
Sbjct: 54  RYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKP 113

Query: 603 GKTALDLAV 611
            K  +   +
Sbjct: 114 YKIVVFKNI 122

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 91.7 bits (228), Expect = 3e-21
 Identities = 20/151 (13%), Positives = 40/151 (26%), Gaps = 35/151 (23%)

Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADV------VRLLLEADANPNTRDN 55
            R  +  +L+  GA I +R   G          G  D+       ++ LE  A+      
Sbjct: 53  ARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYK 112

Query: 56  WNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAH-GADP 114
                + +       D    I   +                            +  G   
Sbjct: 113 PYKIVVFKNIFNYFVDENEMIPLYK-------------------------LIFSQSGLQL 147

Query: 115 FLKNQEGQTPLDLTVA---EDVRSLLQDAMA 142
            +K++ G T L+            +++D + 
Sbjct: 148 LIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 82.0 bits (203), Expect = 6e-18
 Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 22/121 (18%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADI------VRLLLQHGADPSKKNRDGATPL-DL 1116
            +  GA++        T        G  DI       ++ L+ GAD +   +     +   
Sbjct: 62   INKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKN 121

Query: 1117 VREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKR 1176
            +     D ++++     +    + G             +  +D  G   T L      ++
Sbjct: 122  IFNYFVDENEMIPLYKLIFS--QSG----------LQ-LLIKDKWGL--TALEFVKRCQK 166

Query: 1177 H 1177
             
Sbjct: 167  P 167

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 80.9 bits (200), Expect = 2e-17
 Identities = 26/214 (12%), Positives = 49/214 (22%), Gaps = 58/214 (27%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-----------AKALLQHGAD 595
            +  A   G YE    L + G       + K   L++             +  L+  GAD
Sbjct: 9   TVSAAAMLGTYEDFLELFEKGYEDK-ESVLKSNILYDVLRNNNDEARYKISMFLINKGAD 67

Query: 596 INLKNTDGKTALDLAV-PCTRAVLSGDHKKEELLEA-ARMMGGGLHRYTWPLGTTDIGWC 653
           I  +  +G T            +       +  LE  A                 DI   
Sbjct: 68  IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGA-----------------DIT-- 108

Query: 654 SCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV--------VNFKHPYTG 705
                           +     + +          +      +        +  K  + G
Sbjct: 109 -------------ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKW-G 154

Query: 706 DTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNK 739
            T L         ++   ++ +       N K  
Sbjct: 155 LTALEFVKRC---QKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 76.6 bits (189), Expect = 5e-16
 Identities = 16/113 (14%), Positives = 34/113 (30%), Gaps = 11/113 (9%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYP---KRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGH 753
           +  +    G T                  + +  + KGA +    K     +        
Sbjct: 68  IKSRTKE-GTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYF 126

Query: 754 LDVLDT-------LLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           +D  +          + G ++ + D  G TAL    R  K  A++++  +   
Sbjct: 127 VDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 74.3 bits (183), Expect = 3e-15
 Identities = 31/235 (13%), Positives = 58/235 (24%), Gaps = 60/235 (25%)

Query: 241 NAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEF 300
           NAM   ++  +  AA     E    L  +G +       S                    
Sbjct: 2   NAMS--EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNI------------------ 41

Query: 301 KGHCLLEACRQGDPSRVKKFLTS---DVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVA 357
             + +L         ++  FL +   D+   +    G T         L       IT  
Sbjct: 42  -LYDVLRNNNDEARYKISMFLINKGADI-KSRTKE-GTTLF-----FPLFQGGGNDITGT 93

Query: 358 EEMQATVREH------RDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGD 411
            E+     E                  +     N      E   +     +L+ +  G  
Sbjct: 94  TELCKIFLEKGADITALYKP---YKIVVFKNIFNYFVDENEMIPLY----KLIFSQSGLQ 146

Query: 412 MTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDN 466
                         +  +D  G   T L F     +   ++ +  +    + K+N
Sbjct: 147 --------------LLIKDKWGL--TALEFVKRCQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 68.2 bits (167), Expect = 5e-13
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 6/68 (8%)

Query: 212 ALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSR------LEVCSL 265
            +    L N      ++++  LI  GA++ +      T                 E+C +
Sbjct: 40  NILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKI 99

Query: 266 LLSEGADP 273
            L +GAD 
Sbjct: 100 FLEKGADI 107

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 8/73 (10%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVR-------LLLQHGADPSKKNRDGATPLDL 1116
            ++ GA++          + +       D          +  Q G     K++ G T L+ 
Sbjct: 101  LEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEF 160

Query: 1117 -VREGDQDVSDLL 1128
              R        ++
Sbjct: 161  VKRCQKPIALKMM 173

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 65.9 bits (161), Expect = 2e-12
 Identities = 14/120 (11%), Positives = 29/120 (24%), Gaps = 27/120 (22%)

Query: 1077 KFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLV-----REGDQDVSDLL--- 1128
            ++  +  AA  G  +    L + G +  K++   +  L  V      E    +S  L   
Sbjct: 6    EYRTVSAAAMLGTYEDFLELFEKGYE-DKESVLKSNILYDVLRNNNDEARYKISMFLINK 64

Query: 1129 ---------RGNSALLDAAKKGNLGRVQKLLTAD-------NINCRDAQGRNSTPLHLAA 1172
                      G +      + G                   +I       +    +    
Sbjct: 65   GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK--IVVFKNI 122

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 64.3 bits (157), Expect = 8e-12
 Identities = 7/84 (8%), Positives = 25/84 (29%), Gaps = 13/84 (15%)

Query: 217 PLHNACSYGH------FEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLE-------VC 263
                   G        E+ ++ ++ GA++ A+       + +      ++         
Sbjct: 78  LFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYK 137

Query: 264 SLLLSEGADPTLHNCHSKSAIDVA 287
            +    G    + +    +A++  
Sbjct: 138 LIFSQSGLQLLIKDKWGLTALEFV 161

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 64.3 bits (157), Expect = 8e-12
 Identities = 16/102 (15%), Positives = 26/102 (25%), Gaps = 12/102 (11%)

Query: 707 TPLHCAVTSPYPKRKAIVESLIRKGA---HLNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
             +  A              L  KG        K+  L   +    D     +   L+  
Sbjct: 8   RTVSAAAML---GTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINK 64

Query: 764 GAKVNLVDVLGQTALHRTAR------DDKTQAVRVLLSHNAD 799
           GA +      G T      +         T+  ++ L   AD
Sbjct: 65  GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD 106

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 7/67 (10%), Positives = 16/67 (23%), Gaps = 7/67 (10%)

Query: 214 GLVPLHNACSYGHFEVTEM-------LIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLL 266
             + +         +  EM         ++G  +   D W  T L       +     ++
Sbjct: 114 YKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMM 173

Query: 267 LSEGADP 273
                  
Sbjct: 174 EDYIKKY 180

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 62.8 bits (153), Expect = 3e-11
 Identities = 21/217 (9%), Positives = 47/217 (21%), Gaps = 60/217 (27%)

Query: 577 KFTPLHEAAA-------KALLQHGADINLKN---TDGKTALDLAVPCTRAVLSGDHKKEE 626
           ++  +  AA          L + G +              L       R  +S       
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKIS-----MF 60

Query: 627 LLEA-ARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDP 685
           L+   A                 DI               + + +          + G  
Sbjct: 61  LINKGA-----------------DI---------------KSRTKEGTTLFFPLFQGGGN 88

Query: 686 SRVKKFLTSDV-------VNFKHPYTGDTPLHCAVTS---PYPKRKAIVESLI-RKGAHL 734
                     +       +   +       +   + +      +   + + +  + G  L
Sbjct: 89  DITGTTELCKIFLEKGADITALY-KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL 147

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVD 771
             K+K  L  +           L  +     K NL +
Sbjct: 148 LIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 12/92 (13%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANV---NAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            +  A   G +E    L + G             +  L     ++R ++   L+++GAD 
Sbjct: 9   TVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI 68

Query: 274 T---------LHNCHSKSAIDVAPTRELQQRL 296
                               D+  T EL +  
Sbjct: 69  KSRTKEGTTLFFPLFQGGGNDITGTTELCKIF 100

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 7/46 (15%), Positives = 16/46 (34%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRD 1109
             + G  + + D W  T L       K   ++++  +    + K   
Sbjct: 141  SQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 55.8 bits (135), Expect = 8e-09
 Identities = 7/55 (12%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 2   GRKDVVEYLLAS-GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDN 55
               + + + +  G  +  +D  GL  L           ++++ +     N ++N
Sbjct: 131 EMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 12/102 (11%), Positives = 22/102 (21%), Gaps = 34/102 (33%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNT---RDNWNFTPLHEAAAKGKTDVCIGIYFAEHSS 83
            +  A   G  +    L E          + N  +  L     + +  +           
Sbjct: 9   TVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKIS---------- 58

Query: 84  KSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                                   +  GAD   + +EG T  
Sbjct: 59  ---------------------MFLINKGADIKSRTKEGTTLF 79

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 5/31 (16%), Positives = 8/31 (25%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMD 244
           GL  L            +M+       N  +
Sbjct: 154 GLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  117 bits (296), Expect = 8e-31
 Identities = 49/163 (30%), Positives = 66/163 (40%), Gaps = 50/163 (30%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPS 496
             L  AA   +   V  L+A+GADV    NA D++G TPL+ A   G  ++  +L L   
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADV----NAKDEYGLTPLYLATAHGHLEIVEVL-LK-- 68

Query: 497 AANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGH 556
                         G D            VNA D  G   TPLH AA           GH
Sbjct: 69  -------------NGAD------------VNAVDAIGF--TPLHLAA---------FIGH 92

Query: 557 YEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQH 592
            E+ E+L+KHGA+VN  D +  T    +        A+ L + 
Sbjct: 93  LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  110 bits (279), Expect = 2e-28
 Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 57/167 (34%)

Query: 452 EYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKG 511
            +   HG+D+              L EAA+ G+     +L ++                G
Sbjct: 5   HHHHHHGSDLG-----------KKLLEAARAGQDDEVRIL-MA---------------NG 37

Query: 512 GDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVN 571
            D            VNA+D  G   TPL+ A          ++GH E+ E+L+K+GA+VN
Sbjct: 38  AD------------VNAKDEYGL--TPLYLAT---------AHGHLEIVEVLLKNGADVN 74

Query: 572 VADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
             D   FTPLH AA       A+ LL+HGAD+N ++  GKTA D+++
Sbjct: 75  AVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISI 121

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 92.4 bits (231), Expect = 4e-22
 Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 31/125 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G+ D V  L+A+GA ++A+D+ GL PL+ A + GH ++V +LL+  A+ N  D   FTP
Sbjct: 24  AGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTP 83

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH AA  G  ++      AE                           L HGAD   +++ 
Sbjct: 84  LHLAAFIGHLEI------AE-------------------------VLLKHGADVNAQDKF 112

Query: 121 GQTPL 125
           G+T  
Sbjct: 113 GKTAF 117

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 87.1 bits (217), Expect = 3e-20
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
            +  H       L  A  +    +   V  L+  GA +N K++  L P++LA   GHL++
Sbjct: 6   HHHHHGSDLGKKLLEAARA---GQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEI 62

Query: 757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           ++ LL+ GA VN VD +G T LH  A     +   VLL H AD
Sbjct: 63  VEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGAD 105

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 86.3 bits (215), Expect = 6e-20
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPL+ A          IVE L++ GA +N  +     P+HLAA +GHL++ + LL+ G
Sbjct: 47  GLTPLYLATAH---GHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG 103

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN 797
           A VN  D  G+TA   +  +       +L   N
Sbjct: 104 ADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 85.1 bits (212), Expect = 1e-19
 Identities = 24/72 (33%), Positives = 39/72 (54%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +G  ++VE LL +GA ++A D  G  PLH A   GH ++  +LL+  A+ N +D +  T 
Sbjct: 57  HGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTA 116

Query: 61  LHEAAAKGKTDV 72
              +   G  D+
Sbjct: 117 FDISIGNGNEDL 128

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 84.0 bits (209), Expect = 4e-19
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 23/125 (18%)

Query: 1062 HNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREG 1120
            H+  HG+++          L EAA  G+ D VR+L+ +GAD + K+  G TPL L    G
Sbjct: 6    HHHHHGSDLG-------KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHG 58

Query: 1121 DQDVSDLL------------RGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTP 1167
              ++ ++L             G + L  AA  G+L   + LL    ++N +D  G+  T 
Sbjct: 59   HLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGK--TA 116

Query: 1168 LHLAA 1172
              ++ 
Sbjct: 117  FDISI 121

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 80.9 bits (201), Expect = 4e-18
 Identities = 31/59 (52%), Positives = 41/59 (69%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           GL PL+ A ++GH E+ E+L+K GA+VNA+D   FTPLH AA    LE+  +LL  GAD
Sbjct: 47  GLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGAD 105

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 76.3 bits (189), Expect = 2e-16
 Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
           VN  D  G   TPLH AA    + + E LL HGADV    NA DK+G T    +   G  
Sbjct: 73  VNAVDAIGF--TPLHLAAFIGHLEIAEVLLKHGADV----NAQDKFGKTAFDISIGNGNE 126

Query: 486 QLSALL 491
            L+ +L
Sbjct: 127 DLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 75.5 bits (187), Expect = 3e-16
 Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            +K+GA+VN  D   FTPLH AA  G  +I  +LL+HGAD + +++ G T  D+ +  G++
Sbjct: 67   LKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNE 126

Query: 1123 DVSDLL 1128
            D++++L
Sbjct: 127  DLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 75.1 bits (186), Expect = 5e-16
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            L  A   G  +   +L+  GA+VNA D +  TPL+ A +   LE+  +LL  GAD
Sbjct: 17  KLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 68.2 bits (168), Expect = 1e-13
 Identities = 18/52 (34%), Positives = 27/52 (51%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLS 268
           PLH A   GH E+ E+L+K GA+VNA D +  T    +      ++  +L  
Sbjct: 83  PLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 62.8 bits (154), Expect = 1e-11
 Identities = 26/119 (21%), Positives = 39/119 (32%), Gaps = 40/119 (33%)

Query: 8   EYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAK 67
            +    G+ +          L  A   G  D VR+L+   A+ N +D +  TPL+ A A 
Sbjct: 5   HHHHHHGSDLGK-------KLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAH 57

Query: 68  GKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
           G  ++       E                           L  +GAD    +  G TPL
Sbjct: 58  GHLEI------VE--------------------------VLLKNGADVNAVDAIGFTPL 84

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 55.5 bits (135), Expect = 3e-09
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEAD 47
            G  ++ E LL  GA ++A+D  G      +   G+ D+  +L + +
Sbjct: 90  IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 48.9 bits (118), Expect = 7e-07
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH 1099
            +KHGA+VN  D +  T    +   G  D+  +L + 
Sbjct: 100  LKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 42.0 bits (100), Expect = 1e-04
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 7/42 (16%)

Query: 231 EMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
                 G+++          L EAA   + +   +L++ GAD
Sbjct: 5   HHHHHHGSDLG-------KKLLEAARAGQDDEVRILMANGAD 39

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 41.6 bits (99), Expect = 2e-04
 Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 27/83 (32%)

Query: 375 GYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGR 434
           G+T L +A             + ++   LL    G D              VN +D  G+
Sbjct: 80  GFTPLHLAAFIGHL------EIAEV---LL--KHGAD--------------VNAQDKFGK 114

Query: 435 HSTPLHFAAGYNRVAVVEYLLAH 457
             T    + G     + E L   
Sbjct: 115 --TAFDISIGNGNEDLAEILQKL 135

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  115 bits (290), Expect = 3e-30
 Identities = 34/156 (21%), Positives = 48/156 (30%), Gaps = 45/156 (28%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
                    +A     +  V+  +A G DV    N T + G  PLH AA  G+ ++   L
Sbjct: 6   MCD--KEFMWALKNGDLDEVKDYVAKGEDV----NRTLEGGRKPLHYAADCGQLEILEFL 59

Query: 492 PLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNA 551
            L                KG D            +NA D      TPL  A         
Sbjct: 60  -LL---------------KGAD------------INAPDKHHI--TPLLSAV-------- 81

Query: 552 CSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAK 587
              GH    ++L+  GA+  V      T       +
Sbjct: 82  -YEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  114 bits (287), Expect = 8e-30
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 31/138 (22%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  D V+  +A G  ++   +GG  PLH A   G  +++  LL   A+ N  D  + TP
Sbjct: 17  NGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITP 76

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           L  A  +G                  + +                  L+ GAD  +K  +
Sbjct: 77  LLSAVYEGHVSCV-------------KLL------------------LSKGADKTVKGPD 105

Query: 121 GQTPLDLTVAEDVRSLLQ 138
           G T  + T  + +++LLQ
Sbjct: 106 GLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  108 bits (272), Expect = 7e-28
 Identities = 37/151 (24%), Positives = 47/151 (31%), Gaps = 46/151 (30%)

Query: 467 ATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTV 526
                       A + G         ++               KG D            V
Sbjct: 2   PLGSMCDKEFMWALKNGDLDEVKDY-VA---------------KGED------------V 33

Query: 527 NARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA- 585
           N     GR   PLH+AA           G  E+ E L+  GA++N  D    TPL  A  
Sbjct: 34  NRTLEGGR--KPLHYAA---------DCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82

Query: 586 ------AKALLQHGADINLKNTDGKTALDLA 610
                  K LL  GAD  +K  DG TA +  
Sbjct: 83  EGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 90.5 bits (226), Expect = 1e-21
 Identities = 27/74 (36%), Positives = 37/74 (50%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PLH A   G  E+ E L+  GA++NA D    TPL  A  +  +    LLLS+GAD 
Sbjct: 40  GRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADK 99

Query: 274 TLHNCHSKSAIDVA 287
           T+      +A +  
Sbjct: 100 TVKGPDGLTAFEAT 113

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 87.8 bits (219), Expect = 1e-20
 Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 23/112 (20%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            V  G +VN        PLH AA  G+ +I+  LL  GAD +  ++   TP          
Sbjct: 27   VAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITP---------- 76

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGE 1174
                      LL A  +G++  V+ LL+   +   +   G   T       +
Sbjct: 77   ----------LLSAVYEGHVSCVKLLLSKGADKTVKGPDGL--TAFEATDNQ 116

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 87.5 bits (218), Expect = 1e-20
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
            D     A+ +        V+  + KG  +N   +    P+H AAD G L++L+ LL  G
Sbjct: 7   CDKEFMWALKN---GDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG 63

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A +N  D    T L     +     V++LLS  AD
Sbjct: 64  ADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD 98

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 86.7 bits (216), Expect = 3e-20
 Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 7/72 (9%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLK 599
               A   G  +  +  V  G +VN        PLH AA        + LL  GADIN  
Sbjct: 10  EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP 69

Query: 600 NTDGKTALDLAV 611
           +    T L  AV
Sbjct: 70  DKHHITPLLSAV 81

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 76.3 bits (189), Expect = 1e-16
 Identities = 17/56 (30%), Positives = 24/56 (42%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
               A   G  +  +  +  G +VN        PLH AA   +LE+   LL +GAD
Sbjct: 10  EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD 65

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 72.0 bits (178), Expect = 4e-15
 Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 5/111 (4%)

Query: 676 LLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHL 734
            + A + GD   VK ++     VN      G  PLH A       +  I+E L+ KGA +
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEG-GRKPLHYAADC---GQLEILEFLLLKGADI 66

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDD 785
           N  +K  + P+  A   GH+  +  LL  GA   +    G TA   T    
Sbjct: 67  NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 62.8 bits (154), Expect = 6e-12
 Identities = 9/46 (19%), Positives = 18/46 (39%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEV 262
           PL +A   GH    ++L+  GA+         T      +++   +
Sbjct: 76  PLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 51.2 bits (124), Expect = 8e-08
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 3/53 (5%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVL 757
             TPL  AV   Y    + V+ L+ KGA    K  + L       +     +L
Sbjct: 73  HITPLLSAV---YEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALL 122

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 40.8 bits (97), Expect = 3e-04
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 1130 GNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
             +   + A K G+L  V+  +    ++N     GR   PLH AA
Sbjct: 7    CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGR--KPLHYAA 48

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 40.1 bits (95), Expect = 6e-04
 Identities = 4/31 (12%), Positives = 10/31 (32%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVR 1094
            +  GA+  V      T       +    +++
Sbjct: 93   LSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3u9h_A Tankyrase-2; protein-ligand complex, diphtheria toxin like fold, transfer ribosylation; HET: SO4; 1.75A {Homo sapiens} PDB: 3kr8_A* 3kr7_A* 3p0n_A* 3p0p_A* 3p0q_A* 3mhj_A* 3u9y_A* 3ua9_A* 4avu_A* 4avw_A* 3mhk_A* 2rf5_A 3udd_A* 3uh2_A* 3uh4_A* 4dvi_A* Length = 240

 Score =  117 bits (294), Expect = 1e-29
 Identities = 75/125 (60%), Positives = 93/125 (74%), Gaps = 6/125 (4%)

Query: 852 YRHKLLKGIEKLCSSP------SFSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQ 905
           + H    G++    +       + S  GT+LIDL  DDKEF +V EEMQ+TVREHRD G 
Sbjct: 3   HHHHHSSGVDLGTENLYFQSMLNTSGSGTILIDLSPDDKEFQSVEEEMQSTVREHRDGGH 62

Query: 906 SGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGF 965
           +GGIF+RYNI++IQKV N+KLWERY HRR EV++EN   A+ERMLFHGSPF+NAI+ KGF
Sbjct: 63  AGGIFNRYNILKIQKVCNKKLWERYTHRRKEVSEENHNHANERMLFHGSPFVNAIIHKGF 122

Query: 966 DERHA 970
           DERHA
Sbjct: 123 DERHA 127

>3u9h_A Tankyrase-2; protein-ligand complex, diphtheria toxin like fold, transfer ribosylation; HET: SO4; 1.75A {Homo sapiens} PDB: 3kr8_A* 3kr7_A* 3p0n_A* 3p0p_A* 3p0q_A* 3mhj_A* 3u9y_A* 3ua9_A* 4avu_A* 4avw_A* 3mhk_A* 2rf5_A 3udd_A* 3uh2_A* 3uh4_A* 4dvi_A* Length = 240

 Score = 68.6 bits (167), Expect = 8e-13
 Identities = 44/76 (57%), Positives = 49/76 (64%), Gaps = 3/76 (3%)

Query: 1157 CRDAQGRNSTPLHLAAGEK---RHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSS 1213
                 G    P+H         R LL CRVTLGKSFLQF+A+KMAH+PPGHHSV GRPS 
Sbjct: 150  VYGIGGGTGCPVHKDRSCYICHRQLLFCRVTLGKSFLQFSAMKMAHSPPGHHSVTGRPSV 209

Query: 1214 GGLYFPEYVVYRGEQV 1229
             GL   EYV+YRGEQ 
Sbjct: 210  NGLALAEYVIYRGEQA 225

>3u9h_A Tankyrase-2; protein-ligand complex, diphtheria toxin like fold, transfer ribosylation; HET: SO4; 1.75A {Homo sapiens} PDB: 3kr8_A* 3kr7_A* 3p0n_A* 3p0p_A* 3p0q_A* 3mhj_A* 3u9y_A* 3ua9_A* 4avu_A* 4avw_A* 3mhk_A* 2rf5_A 3udd_A* 3uh2_A* 3uh4_A* 4dvi_A* Length = 240

 Score = 41.7 bits (97), Expect = 7e-04
 Identities = 32/36 (88%), Positives = 35/36 (97%)

Query: 75  GIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAH 110
           GIYFAE+SSKSNQYVYGIGGGTGCP+HKDRSCY+ H
Sbjct: 136 GIYFAENSSKSNQYVYGIGGGTGCPVHKDRSCYICH 171

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  112 bits (284), Expect = 1e-29
 Identities = 50/151 (33%), Positives = 61/151 (40%), Gaps = 45/151 (29%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           DG   TPLH AA       V+ LL+ GADV    NA  K G TPLH AA+ G  ++  LL
Sbjct: 8   DGN--TPLHNAAKNGHAEEVKKLLSKGADV----NARSKDGNTPLHLAAKNGHAEIVKLL 61

Query: 492 PLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNA 551
            L+               KG D            VNAR   G   TP H A         
Sbjct: 62  -LA---------------KGAD------------VNARSKDGN--TPEHLAK-------- 83

Query: 552 CSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
              GH+E+ ++L   GA+VN          H
Sbjct: 84  -KNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  103 bits (261), Expect = 2e-26
 Identities = 47/157 (29%), Positives = 57/157 (36%), Gaps = 52/157 (33%)

Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKV 517
           G    SKD      G TPLH AA+ G  +    L LS               KG D    
Sbjct: 1   GHMWGSKD------GNTPLHNAAKNGHAEEVKKL-LS---------------KGAD---- 34

Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK 577
                   VNAR   G   TPLH AA           GH E+ ++L+  GA+VN      
Sbjct: 35  --------VNARSKDGN--TPLHLAA---------KNGHAEIVKLLLAKGADVNARSKDG 75

Query: 578 FTPLHEAA-------AKALLQHGADINLKNTDGKTAL 607
            TP H A         K L   GAD+N ++       
Sbjct: 76  NTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 93.6 bits (234), Expect = 8e-23
 Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 33/126 (26%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  + V+ LL+ GA ++AR   G  PLH A   GHA++V+LLL   A+ N R     TP
Sbjct: 19  NGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTP 78

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQ 119
            H A   G  ++       +                           L A GAD   ++ 
Sbjct: 79  EHLAKKNGHHEI------VK--------------------------LLDAKGADVNARSW 106

Query: 120 EGQTPL 125
                 
Sbjct: 107 GSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 90.9 bits (227), Expect = 7e-22
 Identities = 32/74 (43%), Positives = 38/74 (51%), Gaps = 7/74 (9%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADI 596
           G  PLHNA   GH E  + L+  GA+VN       TPLH AA        K LL  GAD+
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV 68

Query: 597 NLKNTDGKTALDLA 610
           N ++ DG T   LA
Sbjct: 69  NARSKDGNTPEHLA 82

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 84.0 bits (209), Expect = 2e-19
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G+TPLH A  +        V+ L+ KGA +N ++K+   P+HLAA  GH +++  LL  G
Sbjct: 9   GNTPLHNAAKN---GHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           A VN     G T  H   ++   + V++L +  AD
Sbjct: 66  ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 82.4 bits (205), Expect = 6e-19
 Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 23/107 (21%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +  GA+VN       TPLH AA  G A+IV+LLL  GAD + +++DG TP  L       
Sbjct: 29   LSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHL------- 81

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLH 1169
                         A K G+   V+ L     ++N R          H
Sbjct: 82   -------------AKKNGHHEIVKLLDAKGADVNARSWGSS--HHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 80.1 bits (199), Expect = 4e-18
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  ++V+ LLA GA ++AR   G  P H A   GH ++V+LL    A+ N R   +   
Sbjct: 52  NGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111

Query: 61  LH 62
            H
Sbjct: 112 HH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 79.7 bits (198), Expect = 6e-18
 Identities = 28/59 (47%), Positives = 34/59 (57%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G  PLHNA   GH E  + L+  GA+VNA      TPLH AA     E+  LLL++GAD
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 77.4 bits (192), Expect = 4e-17
 Identities = 23/57 (40%), Positives = 31/57 (54%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           PLH A   GH E+ ++L+  GA+VNA      TP H A      E+  LL ++GAD 
Sbjct: 45  PLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 74.7 bits (185), Expect = 3e-16
 Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 25/107 (23%)

Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSD 1126
            G           TPLH AA  G A+ V+ LL  GAD + +++DG TPL L          
Sbjct: 1    GHMWG--SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHL---------- 48

Query: 1127 LLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                      AAK G+   V+ LL    ++N R   G   TP HLA 
Sbjct: 49   ----------AAKNGHAEIVKLLLAKGADVNARSKDGN--TPEHLAK 83

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 70.9 bits (175), Expect = 8e-15
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 4/83 (4%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
           VN +    G+TPLH A  +       IV+ L+ KGA +N ++K+   P HLA   GH ++
Sbjct: 35  VNARSKD-GNTPLHLAAKN---GHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEI 90

Query: 757 LDTLLRLGAKVNLVDVLGQTALH 779
           +  L   GA VN          H
Sbjct: 91  VKLLDAKGADVNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 70.5 bits (174), Expect = 1e-14
 Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 35/113 (30%)

Query: 14  GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVC 73
           G    ++D  G  PLHNA   GHA+ V+ LL   A+ N R     TPLH AA  G  ++ 
Sbjct: 1   GHMWGSKD--GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEI- 57

Query: 74  IGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                 +                           L A GAD   ++++G TP 
Sbjct: 58  -----VK--------------------------LLLAKGADVNARSKDGNTPE 79

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 55.5 bits (135), Expect = 2e-09
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLH 252
           G  P H A   GH E+ ++L   GA+VNA         H
Sbjct: 75  GNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  117 bits (295), Expect = 3e-29
 Identities = 43/261 (16%), Positives = 70/261 (26%), Gaps = 71/261 (27%)

Query: 375 GYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGR 434
           G T L  A  N      +    + L   LL+         + + ++      +  D   +
Sbjct: 54  GKTCLLKAMLNLHNGQND---TIAL---LLD--VARKTDSLKQFVN-----ASYTDSYYK 100

Query: 435 HSTPLHFAAGYNRVAVVEYLLAHGADVHSKDN----------ATDKWGFTPLHEAAQKGR 484
             T LH A     + +V  L+ +GADV +  N              +G  PL  AA   +
Sbjct: 101 GQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQ 160

Query: 485 TQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAA- 543
             +   L                         ++    P  ++ARD+ G   T LH    
Sbjct: 161 LAIVKFL-------------------------LQNSWQPADISARDSVGN--TVLHALVE 193

Query: 544 ------GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALL 590
                        +       +   L        + +    TPL  AA          +L
Sbjct: 194 VADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYIL 253

Query: 591 QHGADINLKNTDGKTALDLAV 611
           Q                  A 
Sbjct: 254 QREI-------HEPECRHAAA 267

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  116 bits (291), Expect = 1e-28
 Identities = 63/353 (17%), Positives = 102/353 (28%), Gaps = 128/353 (36%)

Query: 437 TPLHFAAGYNRVAVVEYLL-------AHGADVHSKDNATDKWGFTPLHEA---AQKGRTQ 486
             +  A   +    +E LL           D   KD    + G T L +A      G+  
Sbjct: 15  RSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDP---ETGKTCLLKAMLNLHNGQND 71

Query: 487 LSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLV 546
             ALL L                       +K+ VN    +  D+  +  T LH A    
Sbjct: 72  TIALL-LD---------------VARKTDSLKQFVN---ASYTDSYYKGQTALHIAI--- 109

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVAD--------------LWKFTPLHEAA------- 585
                    +  +  +LV++GA+V  A                +   PL  AA       
Sbjct: 110 ------ERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAI 163

Query: 586 AKALLQHG---ADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYT 642
            K LLQ+    ADI+ +++ G T L         V   D+  +       M         
Sbjct: 164 VKFLLQNSWQPADISARDSVGNTVLHA------LVEVADNTVDNTKFVTSMYNE------ 211

Query: 643 WPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHP 702
                                            +L    +  P+   +    ++ N K  
Sbjct: 212 ---------------------------------ILILGAKLHPTLKLE----EITNRK-- 232

Query: 703 YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLD 755
             G TPL  A +S    +  ++  ++++  H  E         H AA   H  
Sbjct: 233 --GLTPLALAASS---GKIGVLAYILQREIHEPE-------CRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  107 bits (269), Expect = 7e-26
 Identities = 64/367 (17%), Positives = 104/367 (28%), Gaps = 114/367 (31%)

Query: 236 AGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQR 295
             A      L+    + +A ++S  +    LL     P L     +              
Sbjct: 2   VSAGEKPPRLYDRRSIFDAVAQSNCQELESLL-----PFLQRSKKRLTD----------- 45

Query: 296 LSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLID---------- 345
                                           FK P TG T L   +L            
Sbjct: 46  ------------------------------SEFKDPETGKTCLLKAMLNLHNGQNDTIAL 75

Query: 346 LLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLE 405
           LL   ++  ++ + + A+  +    GQ    TAL +A E          ++V L   L+ 
Sbjct: 76  LLDVARKTDSLKQFVNASYTDSYYKGQ----TALHIAIERRNM------TLVTL---LV- 121

Query: 406 ASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHG---ADVH 462
              G D+                    G    PL  AA  N++A+V++LL +    AD+ 
Sbjct: 122 -ENGADVQAAANGDFFKKTKGRPGFYFGE--LPLSLAACTNQLAIVKFLLQNSWQPADI- 177

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              +A D  G T LH   +                 N      F      ++  +   ++
Sbjct: 178 ---SARDSVGNTVLHALVEVAD--------------NTVDNTKFVTSMYNEILILGAKLH 220

Query: 523 PQT--VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTP 580
           P        +  G   TPL  AA         S G   V   +++   +           
Sbjct: 221 PTLKLEEITNRKGL--TPLALAA---------SSGKIGVLAYILQREIHEP-------EC 262

Query: 581 LHEAAAK 587
            H AA  
Sbjct: 263 RHAAAHH 269

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 95.6 bits (238), Expect = 9e-22
 Identities = 56/299 (18%), Positives = 92/299 (30%), Gaps = 77/299 (25%)

Query: 298 NEFKGHCLLEACRQGDPSRVKKFLTSDV--------VNFKHPYTGDTPLPGTLLID---- 345
             +    + +A  Q +   ++  L              FK P TG T L   +L      
Sbjct: 10  RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQ 69

Query: 346 ------LLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDL 399
                 LL   ++  ++ + + A+  +    GQ    TAL +A E          ++V L
Sbjct: 70  NDTIALLLDVARKTDSLKQFVNASYTDSYYKGQ----TALHIAIERRNM------TLVTL 119

Query: 400 ESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHG- 458
              L+    G D+                    G    PL  AA  N++A+V++LL +  
Sbjct: 120 ---LV--ENGADVQAAANGDFFKKTKGRPGFYFGE--LPLSLAACTNQLAIVKFLLQNSW 172

Query: 459 --ADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTK 516
             AD+    +A D  G T LH   +                 N      F      ++  
Sbjct: 173 QPADI----SARDSVGNTVLHALVEVAD--------------NTVDNTKFVTSMYNEILI 214

Query: 517 VKKLVNPQT--VNARDTAGRKSTPLHFAA-----------------GLVPLHNACSYGH 556
           +   ++P        +  G   TPL  AA                      H A  + H
Sbjct: 215 LGAKLHPTLKLEEITNRKGL--TPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 91.0 bits (226), Expect = 4e-20
 Identities = 42/286 (14%), Positives = 74/286 (25%), Gaps = 81/286 (28%)

Query: 212 ALGLVPLHNA---CSYGHFEVTEMLIKAGANVNAMDLWQ-----------FTPLHEAASK 257
             G   L  A      G  +   +L+      +++  +             T LH A  +
Sbjct: 52  ETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIER 111

Query: 258 SRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRV 317
             + + +LL+  GAD       +         ++ + R    F    L  A         
Sbjct: 112 RNMTLVTLLVENGADV---QAAANGDF----FKKTKGRPGFYFGELPLSLAACTNQL--- 161

Query: 318 KKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYT 377
                  +V                L+                 A +   RD+    G T
Sbjct: 162 ------AIVK--------------FLLQ-----------NSWQPADISA-RDSV---GNT 186

Query: 378 ALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHST 437
            L    E +   +     V  + +++L              L     +    +  G   T
Sbjct: 187 VLHALVEVADNTVDNTKFVTSMYNEILILGA---------KLHPTLKLEEITNRKGL--T 235

Query: 438 PLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG 483
           PL  AA   ++ V+ Y+L                     H AA   
Sbjct: 236 PLALAASSGKIGVLAYILQREIH-----------EPECRHAAAHHH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 85.2 bits (211), Expect = 4e-18
 Identities = 25/142 (17%), Positives = 43/142 (30%), Gaps = 32/142 (22%)

Query: 1   YGRKDVVEYLLASGASIHARDDG--------------GLHPLHNACSFGHADVVRLLLE- 45
                +V  L+ +GA + A  +G              G  PL  A       +V+ LL+ 
Sbjct: 111 RRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN 170

Query: 46  --ADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKD 103
               A+ + RD+   T LH         V    +     ++       +           
Sbjct: 171 SWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKL----------- 219

Query: 104 RSCYLAHGADPFLKNQEGQTPL 125
                       + N++G TPL
Sbjct: 220 ----HPTLKLEEITNRKGLTPL 237

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 84.1 bits (208), Expect = 8e-18
 Identities = 46/345 (13%), Positives = 76/345 (22%), Gaps = 108/345 (31%)

Query: 465 DNATDKWGFTPLHEAAQKGRTQ-LSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNP 523
           +     +    + +A  +   Q L +LLP                         K+L + 
Sbjct: 6   EKPPRLYDRRSIFDAVAQSNCQELESLLPFL-------------------QRSKKRLTD- 45

Query: 524 QTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVA---------- 573
                +D    K T L  A            G  +   +L+      +            
Sbjct: 46  --SEFKDPETGK-TCLLKAM------LNLHNGQNDTIALLLDVARKTDSLKQFVNASYTD 96

Query: 574 -DLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKE 625
                 T LH A           L+++GAD+                 T+        + 
Sbjct: 97  SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFF------KKTKGRPGFYFGEL 150

Query: 626 ELLEAARMMGGGLHRYTWPLGTTDI-------GWCSCCCKMELMFMPRIKDEFKGHCLLE 678
            L  AA                  I        W               +D      L  
Sbjct: 151 PLSLAACT------------NQLAIVKFLLQNSWQPA--------DISARDSVGNTVLHA 190

Query: 679 ACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN 738
                D +       + + N                        +   L          N
Sbjct: 191 LVEVADNTVDNTKFVTSMYNEIL--------------------ILGAKLHPTLKLEEITN 230

Query: 739 KELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR 783
           ++ L P+ LAA  G + VL  +L+                H  A 
Sbjct: 231 RKGLTPLALAASSGKIGVLAYILQREIH-------EPECRHAAAH 268

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 81.8 bits (202), Expect = 5e-17
 Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 26/130 (20%)

Query: 1064 VKHGANVNVAD--------------LWKFTPLHEAAAKGKADIVRLLLQHG---ADPSKK 1106
            V++GA+V  A                +   PL  AA   +  IV+ LLQ+    AD S +
Sbjct: 121  VENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISAR 180

Query: 1107 NRDGATPLDL-VREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLL-TADNINCRDAQGRN 1164
            +  G T L   V   D  V      N+  + +     L    KL  T       + +G  
Sbjct: 181  DSVGNTVLHALVEVADNTV-----DNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGL- 234

Query: 1165 STPLHLAAGE 1174
             TPL LAA  
Sbjct: 235  -TPLALAASS 243

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 79.1 bits (195), Expect = 4e-16
 Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 79/285 (27%)

Query: 566 HGANVNVADLWKFTPLHEAAAK-------ALLQ-------HGADINLKNTD-GKTALDLA 610
             A      L+    + +A A+       +LL           D   K+ + GKT L  A
Sbjct: 2   VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKA 61

Query: 611 VPCTRAVLSGDHKK--EELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIK 668
           +                 LL+ AR                           + +      
Sbjct: 62  MLNLHN----GQNDTIALLLDVARKTD---------------------SLKQFVNASYTD 96

Query: 669 DEFKGH-CLLEACRQGDPSRVKKFL--------------TSDVVNFKHPYTGDTPLHCAV 713
             +KG   L  A  + + + V   +                        Y G+ PL  A 
Sbjct: 97  SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAA 156

Query: 714 TSPYPKRKAIVESLIRKG---AHLNEKNKELLAPIHLAADLGHLDVLDT---------LL 761
                 + AIV+ L++     A ++ ++      +H   ++    V +T         +L
Sbjct: 157 ---CTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEIL 213

Query: 762 RLGAKVN-------LVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            LGAK++       + +  G T L   A   K   +  +L     
Sbjct: 214 ILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH 258

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 75.6 bits (186), Expect = 6e-15
 Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 12/110 (10%)

Query: 1067 GANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSD 1126
             A+   +     T LH A  +    +V LL+++GAD               R G      
Sbjct: 91   NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFY---- 146

Query: 1127 LLRGNSALLDAAKKGNLGRVQKLL----TADNINCRDAQGRNSTPLHLAA 1172
               G   L  AA    L  V+ LL       +I+ RD+ G   T LH   
Sbjct: 147  --FGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGN--TVLHALV 192

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 67.5 bits (165), Expect = 3e-12
 Identities = 30/178 (16%), Positives = 49/178 (27%), Gaps = 42/178 (23%)

Query: 703 YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLA--------------PIHLA 748
           Y G T LH A+     +   +V  L+  GA +                       P+ LA
Sbjct: 99  YKGQTALHIAIER---RNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLA 155

Query: 749 ADLGHLDVLDTLLRLG---AKVNLVDVLGQTALHRTARDDKTQAVRVLLS-------HNA 798
           A    L ++  LL+     A ++  D +G T LH                          
Sbjct: 156 ACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL 215

Query: 799 DTSIVSLLVIFSCSTNLGL---------------KHLLELFEREQITLDILAEMNHED 841
              +   L +   +   GL                ++L+    E       A  +H  
Sbjct: 216 GAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 66.7 bits (163), Expect = 5e-12
 Identities = 25/156 (16%), Positives = 40/156 (25%), Gaps = 53/156 (33%)

Query: 1   YGRKDVVEYLLASGASIHA-----------RDDGGLHPLHNACSFGHADVVRLLLEADAN 49
            G+ D +  LL       +               G   LH A    +  +V LL+E  A+
Sbjct: 67  NGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD 126

Query: 50  PNTRDNWNF--------------TPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGG 95
                N +F               PL  AA   +  +              +++      
Sbjct: 127 VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV-------------KFLLQNS-- 171

Query: 96  TGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAE 131
                           AD   ++  G T L   V  
Sbjct: 172 -------------WQPADISARDSVGNTVLHALVEV 194

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 62.1 bits (151), Expect = 2e-10
 Identities = 21/91 (23%), Positives = 28/91 (30%), Gaps = 19/91 (20%)

Query: 1   YGRKDVVEYLLASG---ASIHARDDGGLHPLHNACSFGHADVVR---------------- 41
             +  +V++LL +    A I ARD  G   LH         V                  
Sbjct: 158 TNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGA 217

Query: 42  LLLEADANPNTRDNWNFTPLHEAAAKGKTDV 72
            L          +    TPL  AA+ GK  V
Sbjct: 218 KLHPTLKLEEITNRKGLTPLALAASSGKIGV 248

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 61.0 bits (148), Expect = 4e-10
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 24/125 (19%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQ-------HGADPSKKNRD-GATPL--- 1114
              A      L+    + +A A+     +  LL           D   K+ + G T L   
Sbjct: 2    VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKA 61

Query: 1115 -DLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAG 1173
               +  G  D   LL   +   D+ K+             +      +G+  T LH+A  
Sbjct: 62   MLNLHNGQNDTIALLLDVARKTDSLKQ---------FVNASYTDSYYKGQ--TALHIAI- 109

Query: 1174 EKRHL 1178
            E+R++
Sbjct: 110  ERRNM 114

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 57.5 bits (139), Expect = 7e-09
 Identities = 25/126 (19%), Positives = 34/126 (26%), Gaps = 44/126 (34%)

Query: 1063 NVKHGANVNVADLWKFTPLHEAAAKGKADIVR---------LLLQHGAD-------PSKK 1106
            N    A+++  D    T LH         +            +L  GA            
Sbjct: 170  NSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEIT 229

Query: 1107 NRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNST 1166
            NR G TPL L                    AA  G +G +  +L       R+       
Sbjct: 230  NRKGLTPLAL--------------------AASSGKIGVLAYILQ------REIHEP--E 261

Query: 1167 PLHLAA 1172
              H AA
Sbjct: 262  CRHAAA 267

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 7/64 (10%)

Query: 5   DVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEA 64
            +   L  +       +  GL PL  A S G   V+  +L+ + +            H A
Sbjct: 214 ILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEP-------ECRHAA 266

Query: 65  AAKG 68
           A   
Sbjct: 267 AHHH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 49.0 bits (117), Expect = 4e-06
 Identities = 9/60 (15%), Positives = 15/60 (25%), Gaps = 8/60 (13%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQD 1123
                   + +    TPL  AA+ GK  ++  +LQ                          
Sbjct: 221  PTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREI-------HEPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 42.8 bits (101), Expect = 4e-04
 Identities = 14/88 (15%), Positives = 24/88 (27%), Gaps = 11/88 (12%)

Query: 731 GAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL-------GAKVNLVDV-LGQTALHR-- 780
            A            I  A    +   L++LL                D   G+T L +  
Sbjct: 3   SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM 62

Query: 781 -TARDDKTQAVRVLLSHNADTSIVSLLV 807
               + +   + +LL     T  +   V
Sbjct: 63  LNLHNGQNDTIALLLDVARKTDSLKQFV 90

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 41.7 bits (98), Expect = 9e-04
 Identities = 14/121 (11%), Positives = 28/121 (23%), Gaps = 27/121 (22%)

Query: 14  GASIHARDDGGLHPLHNACSFGHADVVRLLLEA-------DANPNTRDNWN-FTPLHEAA 65
            A            + +A +  +   +  LL           +   +D     T L +A 
Sbjct: 3   SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM 62

Query: 66  AKGKT-DVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTP 124
                          + + K++     +                   A       +GQT 
Sbjct: 63  LNLHNGQNDTIALLLDVARKTDSLKQFV------------------NASYTDSYYKGQTA 104

Query: 125 L 125
           L
Sbjct: 105 L 105

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  116 bits (292), Expect = 5e-29
 Identities = 51/331 (15%), Positives = 88/331 (26%), Gaps = 109/331 (32%)

Query: 437 TPLHFAAGYNRVA----VVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLP 492
             L              ++ +LL H   +  ++      G T L +A             
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLS-------- 58

Query: 493 LSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNAC 552
              +  ND +  L +         +++ +N      RD   R  T LH A          
Sbjct: 59  ---AGRNDTIPILLDI--AEKTGNMREFIN---SPFRDVYYRGQTALHIAI--------- 101

Query: 553 SYGHYEVTEMLVKHGANVNVAD--------------LWKFTPLHEAA-------AKALLQ 591
                   E+LV+ GA+V+                  +   PL  AA          L +
Sbjct: 102 ERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161

Query: 592 HG---ADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTT 648
           +G   AD+  +++ G T L   V       +      E  +    M              
Sbjct: 162 NGHKQADLRRQDSRGNTVLHALV-------AIADNTRENTKFVTKM-------------- 200

Query: 649 DIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTP 708
                                      LL  C +  P          ++N      G +P
Sbjct: 201 ------------------------YDLLLIKCAKLFP----DTNLEALLNND----GLSP 228

Query: 709 LHCAVTSPYPKRKAIVESLIRKGAHLNEKNK 739
           L  A  +    +  I + +IR+       + 
Sbjct: 229 LMMAAKT---GKIGIFQHIIRREIADAAAHH 256

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  114 bits (287), Expect = 2e-28
 Identities = 42/266 (15%), Positives = 73/266 (27%), Gaps = 64/266 (24%)

Query: 362 ATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSS 421
             + +      S G T L  A  N            D    LL+ ++             
Sbjct: 33  KRLTDEEFREPSTGKTCLPKALLNLSAG------RNDTIPILLDIAEKTGNMREF----- 81

Query: 422 CPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDN----------ATDKW 471
                  RD+  R  T LH A        VE L+  GADVH++                +
Sbjct: 82  --INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYF 139

Query: 472 GFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT 531
           G  PL  AA   +  +   L                           K  +   +  +D+
Sbjct: 140 GELPLSLAACTNQPHIVHYL----------------------TENGHKQAD---LRRQDS 174

Query: 532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK-------FTPLHEA 584
            G   T LH    +       +    ++ ++L+   A +      +        +PL  A
Sbjct: 175 RGN--TVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA 232

Query: 585 A-------AKALLQHGADINLKNTDG 603
           A        + +++        +   
Sbjct: 233 AKTGKIGIFQHIIRREIADAAAHHHH 258

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 92.1 bits (229), Expect = 1e-20
 Identities = 62/291 (21%), Positives = 91/291 (31%), Gaps = 65/291 (22%)

Query: 305 LLEACRQGDPSRVK---KFLTS-----DVVNFKHPYTGDTPLPGTLLID----------L 346
           L +   +G P  ++    FL +         F+ P TG T LP  LL            L
Sbjct: 9   LFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPIL 68

Query: 347 LSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEA 406
           L   ++   + E + +  R+    GQ    TAL +A E   K        V+L   L+  
Sbjct: 69  LDIAEKTGNMREFINSPFRDVYYRGQ----TALHIAIERRCK------HYVEL---LV-- 113

Query: 407 SKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHG---ADVHS 463
            KG D+    R     P         G    PL  AA  N+  +V YL  +G   AD+  
Sbjct: 114 EKGADVHAQARGRFFQPKDEGGYFYFGE--LPLSLAACTNQPHIVHYLTENGHKQADL-- 169

Query: 464 KDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNP 523
                D  G T LH               ++          L    K   L     L   
Sbjct: 170 --RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDL-----LLI--KCAKLFPDTNLEA- 219

Query: 524 QTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVAD 574
                 +  G   +PL  AA           G   + + +++       A 
Sbjct: 220 ----LLNNDGL--SPLMMAA---------KTGKIGIFQHIIRREIADAAAH 255

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 76.7 bits (189), Expect = 2e-15
 Identities = 46/276 (16%), Positives = 71/276 (25%), Gaps = 74/276 (26%)

Query: 537 TPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK----FTPLHEAA------- 585
             L               G   +   L+ H   +   +  +     T L +A        
Sbjct: 7   PILFDIV-----SRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGR 61

Query: 586 ---AKALLQHGAD-----------INLKNTDGKTALDLAVPCTRAVLSGDHKK--EELLE 629
                 LL                       G+TAL +A+           K   E L+E
Sbjct: 62  NDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAI-------ERRCKHYVELLVE 114

Query: 630 AARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVK 689
                G  +H           G           F       F    L  A     P  V 
Sbjct: 115 K----GADVH-------AQARGRFFQPKDEGGYF------YFGELPLSLAACTNQPHIVH 157

Query: 690 KFLTSDVVNFKHP----YTGDTPLHCAVTSPYPKR------KAIVESLIRKGAHLNEK-- 737
            +LT +             G+T LH  V      R        + + L+ K A L     
Sbjct: 158 -YLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTN 216

Query: 738 -----NKELLAPIHLAADLGHLDVLDTLLRLGAKVN 768
                N + L+P+ +AA  G + +   ++R      
Sbjct: 217 LEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 76.0 bits (187), Expect = 4e-15
 Identities = 40/270 (14%), Positives = 73/270 (27%), Gaps = 75/270 (27%)

Query: 579 TPLHEAAAKA-----------LLQHGADINLKNT----DGKTALDLAVPCTRAVLSGDHK 623
             L +  ++            LL H   +  +       GKT L  A+    A   G + 
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSA---GRND 63

Query: 624 KEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGH-CLLEACRQ 682
              +L       G +                     E +  P     ++G   L  A  +
Sbjct: 64  TIPILLDIAEKTGNMR--------------------EFINSPFRDVYYRGQTALHIAIER 103

Query: 683 GDP--------------SRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLI 728
                            ++ +           + Y G+ PL  A  +    +  IV  L 
Sbjct: 104 RCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACT---NQPHIVHYLT 160

Query: 729 RKG---AHLNEKNKELLAPIHLAADLGH---------LDVLDTLLRLGAKVN-------L 769
             G   A L  ++      +H    +             + D LL   AK+        L
Sbjct: 161 ENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEAL 220

Query: 770 VDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           ++  G + L   A+  K    + ++     
Sbjct: 221 LNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 76.0 bits (187), Expect = 4e-15
 Identities = 43/279 (15%), Positives = 76/279 (27%), Gaps = 80/279 (28%)

Query: 209 QAVALGLVPLHNA---CSYGHFEVTEMLIKAG-----------ANVNAMDLWQFTPLHEA 254
           +  + G   L  A    S G  +   +L+              +    +     T LH A
Sbjct: 41  REPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIA 100

Query: 255 ASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDP 314
             +       LL+ +GAD                 +   +     F    L  A     P
Sbjct: 101 IERRCKHYVELLVEKGADVHAQARGRF-------FQPKDEGGYFYFGELPLSLAACTNQP 153

Query: 315 SRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSG 374
             V                         L +               QA +R  +D+    
Sbjct: 154 HIVH-----------------------YLTE-----------NGHKQADLRR-QDS---R 175

Query: 375 GYTALQVA---GENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDL 431
           G T L       +N+++  +    + DL   LL   K          L    ++    + 
Sbjct: 176 GNTVLHALVAIADNTRENTKFVTKMYDL---LLI--KCAK-------LFPDTNLEALLNN 223

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDK 470
           DG   +PL  AA   ++ + ++++         D A   
Sbjct: 224 DGL--SPLMMAAKTGKIGIFQHIIRREI----ADAAAHH 256

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 74.8 bits (184), Expect = 1e-14
 Identities = 37/296 (12%), Positives = 70/296 (23%), Gaps = 86/296 (29%)

Query: 218 LHNACSYGHFEVTEMLIKAGANVNAMDLWQ----FTPLHEAA---SKSRLEVCSLLLSEG 270
           +      G   +   L+     +   +  +     T L +A    S  R +   +LL   
Sbjct: 13  VSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIA 72

Query: 271 ADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGH-CLLEACRQGDPSRVKKFLTSDVVNFK 329
                      S                 ++G   L  A  +     V+           
Sbjct: 73  EKTGNMREFINSPFR-----------DVYYRGQTALHIAIERRCKHYVE----------- 110

Query: 330 HPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKL 389
                       LL++  +D    +      +    +        G   L +A       
Sbjct: 111 ------------LLVEKGAD----VHAQARGRFFQPKDEGGYFYFGELPLSLAACT---- 150

Query: 390 LQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHI--VNCRDLDGRHSTPLHFAAGYN- 446
                                   +V  L  +      +  +D  G   T LH       
Sbjct: 151 --------------------NQPHIVHYLTENGHKQADLRRQDSRGN--TVLHALVAIAD 188

Query: 447 --------RVAVVEYLLAHGADVHSKDNA---TDKWGFTPLHEAAQKGRTQLSALL 491
                      + + LL   A +    N     +  G +PL  AA+ G+  +   +
Sbjct: 189 NTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHI 244

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 72.1 bits (177), Expect = 7e-14
 Identities = 22/109 (20%), Positives = 32/109 (29%), Gaps = 12/109 (11%)

Query: 1068 ANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDL 1127
            +          T LH A  +     V LL++ GAD   + R                   
Sbjct: 84   SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYF---- 139

Query: 1128 LRGNSALLDAAKKGNLGRVQKLL----TADNINCRDAQGRNSTPLHLAA 1172
              G   L  AA       V  L        ++  +D++G   T LH   
Sbjct: 140  --GELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGN--TVLHALV 184

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 68.3 bits (167), Expect = 2e-12
 Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 30/132 (22%)

Query: 1064 VKHGANVNVAD--------------LWKFTPLHEAAAKGKADIVRLLLQHG---ADPSKK 1106
            V+ GA+V+                  +   PL  AA   +  IV  L ++G   AD  ++
Sbjct: 113  VEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQ 172

Query: 1107 NRDGATPL-DLVREGD--QDVSDLLRGNSALLDAAKKGNLGRVQKLLTADNI-NCRDAQG 1162
            +  G T L  LV   D  ++ +  +     LL       L +  KL    N+    +  G
Sbjct: 173  DSRGNTVLHALVAIADNTRENTKFVTKMYDLL-------LIKCAKLFPDTNLEALLNNDG 225

Query: 1163 RNSTPLHLAAGE 1174
               +PL +AA  
Sbjct: 226  L--SPLMMAAKT 235

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 63.6 bits (155), Expect = 4e-11
 Identities = 31/173 (17%), Positives = 47/173 (27%), Gaps = 46/173 (26%)

Query: 1   YGRKDVVEYLLASG-----------ASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN 49
            GR D +  LL              +        G   LH A        V LL+E  A+
Sbjct: 59  AGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD 118

Query: 50  PNTRDNWNF--------------TPLHEAAAKGKTDVCI-----GIYFAEHSSKSNQ--- 87
            + +    F               PL  AA   +  +       G   A+   + ++   
Sbjct: 119 VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNT 178

Query: 88  ---YVYGIGGGTGCPMHKDRSCY---LAHGAD-------PFLKNQEGQTPLDL 127
               +  I   T          Y   L   A          L N +G +PL +
Sbjct: 179 VLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMM 231

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 59.8 bits (145), Expect = 9e-10
 Identities = 30/172 (17%), Positives = 47/172 (27%), Gaps = 49/172 (28%)

Query: 2   GRKDVVEYLLASGASIHARD----DGGLHPLHNA---CSFGHADVVRLLLEA-------- 46
           G + ++ +LL     +   +      G   L  A    S G  D + +LL+         
Sbjct: 20  GLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR 79

Query: 47  ---DANPNTRDNWNFTPLHEAAAKGKTDV--------------CIGIYFAEHSSKSNQYV 89
              ++          T LH A  +                     G +F         Y 
Sbjct: 80  EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFY- 138

Query: 90  YGIGGGTGCPMH-------KDRSCYL-AHG---ADPFLKNQEGQTPLDLTVA 130
               G    P+             YL  +G   AD   ++  G T L   VA
Sbjct: 139 ---FGEL--PLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVA 185

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 59.0 bits (143), Expect = 2e-09
 Identities = 20/91 (21%), Positives = 30/91 (32%), Gaps = 19/91 (20%)

Query: 1   YGRKDVVEYLLASG---ASIHARDDGGLHPLHNACSFGH---------ADVVRLLLEADA 48
             +  +V YL  +G   A +  +D  G   LH   +              +  LLL   A
Sbjct: 150 TNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCA 209

Query: 49  NPNT-------RDNWNFTPLHEAAAKGKTDV 72
                       +N   +PL  AA  GK  +
Sbjct: 210 KLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 57.9 bits (140), Expect = 4e-09
 Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 29/129 (22%)

Query: 1064 VKHGANVNVADLWK----FTPLHEAA---AKGKADIVRLLLQHGADPSKKNRDGATPLDL 1116
            + H   +   +  +     T L +A    + G+ D + +LL                 + 
Sbjct: 29   LTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR-------EF 81

Query: 1117 VREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNS---------- 1165
            +    +DV    RG +AL  A ++     V+ L+    +++ +                 
Sbjct: 82   INSPFRDVYY--RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYF 139

Query: 1166 --TPLHLAA 1172
               PL LAA
Sbjct: 140  GELPLSLAA 148

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 51.3 bits (123), Expect = 7e-07
 Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 24/112 (21%)

Query: 1079 TPLHEAAAKGKA----DIVRLLLQHGAD----PSKKNRDGATPL----DLVREGDQDVSD 1126
              L +  ++G       ++  LL H         ++   G T L      +  G  D   
Sbjct: 7    PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIP 66

Query: 1127 LLRGNSALLDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAAGEKRHL 1178
            +      LLD A+K        +    N   RD   R  T LH+A  E+R  
Sbjct: 67   I------LLDIAEKTG-----NMREFINSPFRDVYYRGQTALHIAI-ERRCK 106

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 45.5 bits (108), Expect = 4e-05
 Identities = 23/117 (19%), Positives = 32/117 (27%), Gaps = 38/117 (32%)

Query: 1063 NVKHGANVNVADLWKFTPLHEAAA---------KGKADIVRLLLQHGADPSKK------- 1106
            N    A++   D    T LH   A         K    +  LLL   A            
Sbjct: 162  NGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALL 221

Query: 1107 NRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLT--ADNINCRDAQ 1161
            N DG +PL +                    AAK G +G  Q ++     +       
Sbjct: 222  NNDGLSPLMM--------------------AAKTGKIGIFQHIIRREIADAAAHHHH 258

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 43.6 bits (103), Expect = 2e-04
 Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 7/59 (11%)

Query: 4   KDVVEYLLASGASIHA-------RDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDN 55
             + + LL   A +          ++ GL PL  A   G   + + ++  +       +
Sbjct: 198 TKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAAHH 256

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 42.1 bits (99), Expect = 7e-04
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 7/77 (9%)

Query: 739 KELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDV----LGQTALHRTA---RDDKTQAVR 791
             L   +   +  G   +L  LL    ++   +      G+T L +        +   + 
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIP 66

Query: 792 VLLSHNADTSIVSLLVI 808
           +LL     T  +   + 
Sbjct: 67  ILLDIAEKTGNMREFIN 83

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  103 bits (259), Expect = 4e-24
 Identities = 36/213 (16%), Positives = 67/213 (31%), Gaps = 46/213 (21%)

Query: 413 TVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWG 472
            V     ++  ++    D  G   TPLH+      + +V++L+ HG++    DN     G
Sbjct: 111 EVNDAFPNTQLNLNIPVDEHGN--TPLHWLTSIANLELVKHLVKHGSNRLYGDNM----G 164

Query: 473 FTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTA 532
            + L +A +                 N+     FEA        +  L     +   D+ 
Sbjct: 165 ESCLVKAVKSV---------------NNYDSGTFEAL-------LDYLYP--CLILEDSM 200

Query: 533 GRKSTPLHFAA---GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKA- 588
            R  T LH      G+     A  Y    +   +VK       +   +            
Sbjct: 201 NR--TILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER 258

Query: 589 ----------LLQHGADINLKNTDGKTALDLAV 611
                            +N ++++G T L++A 
Sbjct: 259 KDSILENLDLKWIIANMLNAQDSNGDTCLNIAA 291

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 99.3 bits (247), Expect = 2e-22
 Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 40/219 (18%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA----------AKALLQH-GAD 595
           PLH   S  + E+ + LVKHG+N    D    + L +A            +ALL +    
Sbjct: 134 PLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC 193

Query: 596 INLKNTDGKTALDLAVPCTRA---VLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGW 652
           + L+++  +T L   +  +       +  +  + L+           +       +    
Sbjct: 194 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 253

Query: 653 CSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCA 712
            +   K  ++    +K                          +++N +    GDT L+ A
Sbjct: 254 KNGERKDSILENLDLKWIIA----------------------NMLNAQDSN-GDTCLNIA 290

Query: 713 VTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADL 751
                    +IV++L+  GA     NK  L P+   A L
Sbjct: 291 ARL---GNISIVDALLDYGADPFIANKSGLRPVDFGAGL 326

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 94.3 bits (234), Expect = 8e-21
 Identities = 39/253 (15%), Positives = 77/253 (30%), Gaps = 55/253 (21%)

Query: 549 HNACSYGHYEVTEMLVKHGANVNVA-DLWKFTPLHEAA-------AKALLQHGADINLKN 600
           H +      EV +       N+N+  D    TPLH           K L++HG++    +
Sbjct: 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD 161

Query: 601 TDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKME 660
             G++ L  AV       SG    E LL+                    +          
Sbjct: 162 NMGESCLVKAVKSVNNYDSG--TFEALLD---------------YLYPCL---------- 194

Query: 661 LMFMPRIKDEFKG----HCLLEACRQGDPSRVKKFLTSDVVNF----------KHPYTGD 706
                 ++D        H ++        S   K+    ++ +                +
Sbjct: 195 -----ILEDS-MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKE 248

Query: 707 TPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAK 766
           +  +             ++        LN ++      +++AA LG++ ++D LL  GA 
Sbjct: 249 SKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD 308

Query: 767 VNLVDVLGQTALH 779
             + +  G   + 
Sbjct: 309 PFIANKSGLRPVD 321

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 90.9 bits (225), Expect = 1e-19
 Identities = 45/301 (14%), Positives = 87/301 (28%), Gaps = 52/301 (17%)

Query: 188 SLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHF-EVTEMLIKAGANVNA-MDL 245
            L P     P +L                   +        EV +       N+N  +D 
Sbjct: 70  LLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDE 129

Query: 246 WQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCL 305
              TPLH   S + LE+   L+  G++    +   +S +  A               +  
Sbjct: 130 HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAV-----------KSVNNY 178

Query: 306 LEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFI-----TVAEEM 360
                 G    +  +L    +  +      T L   ++   ++            +   +
Sbjct: 179 ----DSGTFEALLDYLYPC-LILEDSM-NRTILHHIIITSGMTGCSAAAKYYLDILMGWI 232

Query: 361 QATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLS 420
                    +G +   +         K  + E   +  + + +L                
Sbjct: 233 VKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANML---------------- 276

Query: 421 SCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAA 480
                 N +D +G   T L+ AA    +++V+ LL +GAD        +K G  P+   A
Sbjct: 277 ------NAQDSNGD--TCLNIAARLGNISIVDALLDYGADP----FIANKSGLRPVDFGA 324

Query: 481 Q 481
            
Sbjct: 325 G 325

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 77.4 bits (190), Expect = 3e-15
 Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 28/121 (23%)

Query: 1058 TLTPHNVKHGANVNVA-DLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL 1116
             +         N+N+  D    TPLH   +    ++V+ L++HG++    +  G + L  
Sbjct: 111  EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVK 170

Query: 1117 VREGDQDVSDLLRGNSALLDAAKKGN---LGRVQKLLT--ADNINCRDAQGRNSTPLHLA 1171
                                A K  N    G  + LL      +   D+  R  T LH  
Sbjct: 171  --------------------AVKSVNNYDSGTFEALLDYLYPCLILEDSMNR--TILHHI 208

Query: 1172 A 1172
             
Sbjct: 209  I 209

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 74.7 bits (183), Expect = 2e-14
 Identities = 21/147 (14%), Positives = 41/147 (27%), Gaps = 22/147 (14%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHA----DVVRLLLEADANPNTRDNW 56
               ++V++L+  G++    D+ G   L  A    +         LL          D+ 
Sbjct: 141 IANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSM 200

Query: 57  NFTPLHEAAA----KGKTDVCIGI------YFAEHSSKSNQYVYGIGGGTGCPMHKDRSC 106
           N T LH         G +            +  +  ++  Q             + +R  
Sbjct: 201 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKD 260

Query: 107 YLAHGADPFL--------KNQEGQTPL 125
            +    D           ++  G T L
Sbjct: 261 SILENLDLKWIIANMLNAQDSNGDTCL 287

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 68.1 bits (166), Expect = 3e-12
 Identities = 19/60 (31%), Positives = 25/60 (41%)

Query: 1062 HNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGD 1121
                    +N  D    T L+ AA  G   IV  LL +GADP   N+ G  P+D     +
Sbjct: 268  LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 67.4 bits (164), Expect = 6e-12
 Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 19/161 (11%)

Query: 697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV 756
           +N      G+TPLH   +        +V+ L++ G++    +    + +  A    +   
Sbjct: 123 LNIPVDEHGNTPLHWLTSI---ANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 179

Query: 757 LDT----LLRLGAKVNLVDVLGQTALH----RTARDDKTQAVR--------VLLSHNADT 800
             T    L  L   + L D + +T LH     +     + A +         ++      
Sbjct: 180 SGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRP 239

Query: 801 SIVSLLVIFSCSTNLGLKHLLELFEREQITLDILAEMNHED 841
                    S   +   +    + E   +   I   +N +D
Sbjct: 240 IQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQD 280

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 66.2 bits (161), Expect = 1e-11
 Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 4   KDVVEYLLASGASI-HARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLH 62
           ++V +    +  ++    D+ G  PLH   S  + ++V+ L++  +N    DN   + L 
Sbjct: 110 QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLV 169

Query: 63  EAAAKG 68
           +A    
Sbjct: 170 KAVKSV 175

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 62.4 bits (151), Expect = 3e-10
 Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 13/111 (11%)

Query: 705 GDTPLHCAVTSPYPKRKA---------IVESLIRKGAHLNEKNKELLAPIHLAADLGH-- 753
             T LH  + +      +         ++  +++K     +             +     
Sbjct: 201 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKD 260

Query: 754 --LDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSI 802
             L+ LD    +   +N  D  G T L+  AR      V  LL + AD  I
Sbjct: 261 SILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFI 311

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 62.4 bits (151), Expect = 3e-10
 Identities = 19/136 (13%), Positives = 49/136 (36%), Gaps = 9/136 (6%)

Query: 671 FKGHCLLEACRQGDPSRVKKFLTSDV--VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLI 728
            K    L+     +   +   L +D    N +   +     H +  S     + + ++  
Sbjct: 61  MKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLL---QEVNDAFP 117

Query: 729 RKGAHLNEK-NKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDD-- 785
               +LN   ++    P+H    + +L+++  L++ G+     D +G++ L +  +    
Sbjct: 118 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNN 177

Query: 786 -KTQAVRVLLSHNADT 800
             +     LL +    
Sbjct: 178 YDSGTFEALLDYLYPC 193

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 60.4 bits (146), Expect = 1e-09
 Identities = 13/62 (20%), Positives = 26/62 (41%)

Query: 4   KDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHE 63
            + ++        ++A+D  G   L+ A   G+  +V  LL+  A+P   +     P+  
Sbjct: 263 LENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDF 322

Query: 64  AA 65
            A
Sbjct: 323 GA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 56.6 bits (136), Expect = 2e-08
 Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 32/138 (23%)

Query: 1066 HGANVNVADLWKFTPLHEAAA----KGKADIVR--------LLLQHGADPSKKNRDGATP 1113
                + + D    T LH         G +   +         +++    P +   +    
Sbjct: 190  LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKES 249

Query: 1114 L--DLVREGDQDVSDLLR---------------GNSALLDAAKKGNLGRVQKLLTAD-NI 1155
               D   E    + + L                G++ L  AA+ GN+  V  LL    + 
Sbjct: 250  KPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP 309

Query: 1156 NCRDAQGRNSTPLHLAAG 1173
               +  G    P+   AG
Sbjct: 310  FIANKSGL--RPVDFGAG 325

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 55.4 bits (133), Expect = 4e-08
 Identities = 21/136 (15%), Positives = 38/136 (27%), Gaps = 35/136 (25%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLE----ADANPNTRDNW 56
           Y    ++ +++                  N  +    D +   L+         N +D+ 
Sbjct: 223 YYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSN 282

Query: 57  NFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFL 116
             T L+ AA  G   +                                   L +GADPF+
Sbjct: 283 GDTCLNIAARLGNISIV-------------------------------DALLDYGADPFI 311

Query: 117 KNQEGQTPLDLTVAED 132
            N+ G  P+D     +
Sbjct: 312 ANKSGLRPVDFGAGLE 327

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 13/125 (10%), Positives = 32/125 (25%), Gaps = 33/125 (26%)

Query: 3   RKDVVEYLLASGASIHARDDGGLHPLHN-ACSFGHADVVRLLLEADANPNT-RDNWNFTP 60
            +++   L    ++ ++          + +      +V         N N   D    TP
Sbjct: 75  IQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTP 134

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH   +    ++                                   + HG++    +  
Sbjct: 135 LHWLTSIANLELV-------------------------------KHLVKHGSNRLYGDNM 163

Query: 121 GQTPL 125
           G++ L
Sbjct: 164 GESCL 168

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 95.9 bits (240), Expect = 7e-24
 Identities = 52/137 (37%), Positives = 63/137 (45%), Gaps = 45/137 (32%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           +GR  TPLH AA    + VV+ LL  GADV    NA DK G TPLH AA+ G  ++  LL
Sbjct: 1   NGR--TPLHLAARNGHLEVVKLLLEAGADV----NAKDKNGRTPLHLAARNGHLEVVKLL 54

Query: 492 PLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNA 551
            L                 G D            VNA+D  GR  TPLH AA        
Sbjct: 55  -LE---------------AGAD------------VNAKDKNGR--TPLHLAA-------- 76

Query: 552 CSYGHYEVTEMLVKHGA 568
              GH EV ++L++ GA
Sbjct: 77  -RNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 92.0 bits (230), Expect = 1e-22
 Identities = 34/72 (47%), Positives = 45/72 (62%)

Query: 1  YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           G  +VV+ LL +GA ++A+D  G  PLH A   GH +VV+LLLEA A+ N +D    TP
Sbjct: 12 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTP 71

Query: 61 LHEAAAKGKTDV 72
          LH AA  G  +V
Sbjct: 72 LHLAARNGHLEV 83

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 90.1 bits (225), Expect = 7e-22
 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 7/74 (9%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADI 596
           G  PLH A   GH EV ++L++ GA+VN  D    TPLH AA        K LL+ GAD+
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 597 NLKNTDGKTALDLA 610
           N K+ +G+T L LA
Sbjct: 62  NAKDKNGRTPLHLA 75

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 82.4 bits (205), Expect = 4e-19
 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 3/94 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
           G TPLH A  +       +V+ L+  GA +N K+K    P+HLAA  GHL+V+  LL  G
Sbjct: 2   GRTPLHLAARN---GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 58

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA 798
           A VN  D  G+T LH  AR+   + V++LL   A
Sbjct: 59  ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 80.5 bits (200), Expect = 2e-18
 Identities = 32/59 (54%), Positives = 37/59 (62%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
           G  PLH A   GH EV ++L++AGA+VNA D    TPLH AA    LEV  LLL  GAD
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 79.3 bits (197), Expect = 4e-18
 Identities = 46/130 (35%), Positives = 56/130 (43%), Gaps = 46/130 (35%)

Query: 472 GFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT 531
           G TPLH AA+ G  ++  LL L                 G D            VNA+D 
Sbjct: 2   GRTPLHLAARNGHLEVVKLL-LE---------------AGAD------------VNAKDK 33

Query: 532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA------ 585
            GR  TPLH AA           GH EV ++L++ GA+VN  D    TPLH AA      
Sbjct: 34  NGR--TPLHLAA---------RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82

Query: 586 -AKALLQHGA 594
             K LL+ GA
Sbjct: 83  VVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 77.0 bits (191), Expect = 3e-17
 Identities = 30/55 (54%), Positives = 35/55 (63%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
           PLH A   GH EV ++L++AGA+VNA D    TPLH AA    LEV  LLL  GA
Sbjct: 38  PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 73.2 bits (181), Expect = 7e-16
 Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 24/102 (23%)

Query: 1078 FTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDA 1137
             TPLH AA  G  ++V+LLL+ GAD + K+++G TPL L                    A
Sbjct: 3    RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL--------------------A 42

Query: 1138 AKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHL 1178
            A+ G+L  V+ LL A  ++N +D  GR  TPLHLAA    HL
Sbjct: 43   ARNGHLEVVKLLLEAGADVNAKDKNGR--TPLHLAA-RNGHL 81

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 72.8 bits (180), Expect = 8e-16
 Identities = 24/51 (47%), Positives = 35/51 (68%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPL 1114
            ++ GA+VN  D    TPLH AA  G  ++V+LLL+ GAD + K+++G TPL
Sbjct: 22   LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 66.6 bits (164), Expect = 1e-13
 Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 33/100 (33%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSN 86
           PLH A   GH +VV+LLLEA A+ N +D    TPLH AA  G  +V       +      
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV------VK------ 52

Query: 87  QYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                                L   GAD   K++ G+TPL
Sbjct: 53  --------------------LLLEAGADVNAKDKNGRTPL 72

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 61.6 bits (151), Expect = 8e-12
 Identities = 24/48 (50%), Positives = 32/48 (66%)

Query: 1  YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADA 48
           G  +VV+ LL +GA ++A+D  G  PLH A   GH +VV+LLLEA A
Sbjct: 45 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 55.8 bits (136), Expect = 9e-10
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query: 744 PIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
           P+HLAA  GHL+V+  LL  GA VN  D  G+T LH  AR+   + V++LL   AD
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 55.8 bits (136), Expect = 1e-09
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGA 1101
            ++ GA+VN  D    TPLH AA  G  ++V+LLL+ GA
Sbjct: 55   LEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  101 bits (253), Expect = 5e-23
 Identities = 52/410 (12%), Positives = 97/410 (23%), Gaps = 94/410 (22%)

Query: 358 EEMQATVREHRDNGQSGGYTALQVAGENS--KKLLQEPPSV-VDLESQLLEASKGGDMTV 414
           E +   +   ++  Q      L  A  N   K+L  +     +  E     A+  G  + 
Sbjct: 48  EAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSA 107

Query: 415 --VTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWG 472
                LL +   IV     +         AA    + V+  L              +   
Sbjct: 108 LDTLCLLLTSDEIVKVIQAENY--QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE--N 163

Query: 473 FTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLV-NPQTVNARDT 531
           +     AA+ G   +                             + +L     T      
Sbjct: 164 YHAFRLAAENGHLHV-----------------------------LNRLCELAPTEATAMI 194

Query: 532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQ 591
                    +AA           GH+ V   L+     +  A++ +F    +     + +
Sbjct: 195 QAENYYAFRWAA--------VGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIAR 246

Query: 592 HGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIG 651
           H   +     +   A  L+           +                       G  D+ 
Sbjct: 247 HVNRLK----EMHDAFKLS-----------NPD---------------------GVFDLV 270

Query: 652 WCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHC 711
             S C +   M    I+   +    L+  R        K L                L  
Sbjct: 271 TKSECLQGFYMLRNLIRRNDEVL--LDDIRFLLSIPGIKALAPTATIPGDANE---LLRL 325

Query: 712 AVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLL 761
           A+       +     L+   + L           ++    G LD+    L
Sbjct: 326 ALRL---GNQGACALLLSIPSVLALTKA---NNYYINETGGRLDLRAVAL 369

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 99.6 bits (248), Expect = 2e-22
 Identities = 48/370 (12%), Positives = 91/370 (24%), Gaps = 66/370 (17%)

Query: 450 VVEYLLAHGADVHSKDNATDKWGFTPLHEAAQ-KGRTQLSALLPLSPSAANDPLRELFEA 508
            +   L    ++              L+ A   +   QL +        +          
Sbjct: 49  AIHIFLPGTKNMEQVR------QLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAIT 102

Query: 509 CKGGDLTKVKKLVNP-QTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHG 567
                L  +  L+   + V               A            GH  V   L +  
Sbjct: 103 GCSSALDTLCLLLTSDEIVKVIQAENY--QAFRLA---------AENGHLHVLNRLCELA 151

Query: 568 ANVNVADLWK--FTPLHEAA-------AKALLQHGADINLKNTDGK--TALDLAVPCTRA 616
               +A +    +     AA          L +            +   A   A     A
Sbjct: 152 PTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWA-----A 206

Query: 617 VLSGDHKK--EELLEA-ARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKG 673
           V  G H      LL+    +    +H + +  G   +             + R+K+    
Sbjct: 207 VGRG-HHNVINFLLDCPVMLAYAEIHEFEY--GEKYV------NPFIARHVNRLKE---- 253

Query: 674 HCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLI----- 728
             + +A +  +P  V      D+V       G   L   +          +  L+     
Sbjct: 254 --MHDAFKLSNPDGVF-----DLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGI 306

Query: 729 RKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQ 788
           +  A       +    + LA  LG+      LL + + + L         +      +  
Sbjct: 307 KALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTK---ANNYYINETGGRLD 363

Query: 789 AVRVLLSHNA 798
              V L H+ 
Sbjct: 364 LRAVALEHHH 373

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 97.7 bits (243), Expect = 1e-21
 Identities = 35/284 (12%), Positives = 59/284 (20%), Gaps = 55/284 (19%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQ--FTPLHEAASKSRLEVCSLLLSEGADPT 274
               A   GH  V   L +         +    +     AA    L V + L        
Sbjct: 131 AFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEA 190

Query: 275 LHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTG 334
                ++                     +    A        V  FL    V   +    
Sbjct: 191 TAMIQAE-------------------NYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIH 231

Query: 335 DTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPP 394
           +    G   ++                        N     + A +++  +    L    
Sbjct: 232 EFE-YGEKYVNPF-----------------IARHVNRLKEMHDAFKLSNPDGVFDLVTKS 273

Query: 395 SVVDLESQLLEASKGGDMTV--VTRLLSSCPHI-----VNCRDLDGRHSTPLHFAAGYNR 447
             +     L    +  D  +    R L S P I           D      L  A     
Sbjct: 274 ECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDAN--ELLRLALRLGN 331

Query: 448 VAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
                 LL+  + +               +     GR  L A+ 
Sbjct: 332 QGACALLLSIPSVLALTKA-------NNYYINETGGRLDLRAVA 368

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 84.2 bits (208), Expect = 3e-17
 Identities = 34/291 (11%), Positives = 58/291 (19%), Gaps = 47/291 (16%)

Query: 6   VVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAA 65
             + L +       + +               D + LLL +D         N+     AA
Sbjct: 77  NAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 136

Query: 66  AKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCY----------LAHGADPF 115
             G   V       E +      +               +                    
Sbjct: 137 ENGHLHVL--NRLCELAPTEIMAMIQAENYH--AFRL--AAENGHLHVLNRLCELAPTEA 190

Query: 116 LKN--QEGQTPLDLTVAE----DVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGD 169
                 E               +V + L D       A            + +       
Sbjct: 191 TAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNR 250

Query: 170 NVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEV 229
              +    + S   G                + V   +      G   L N        +
Sbjct: 251 LKEMHDAFKLSNPDG--------------VFDLV---TKSECLQGFYMLRNLIRRNDEVL 293

Query: 230 TEML--------IKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
            + +        IKA A    +       L  A        C+LLLS  + 
Sbjct: 294 LDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSV 344

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 82.7 bits (204), Expect = 1e-16
 Identities = 35/277 (12%), Positives = 68/277 (24%), Gaps = 47/277 (16%)

Query: 1   YGRKDVVEYLLASGASIHARD--DGGLHPLHNACSFGHADVVRLLLEADANPN--TRDNW 56
            G   V+  L     +           H    A   GH  V+  L E             
Sbjct: 138 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAE 197

Query: 57  NFTPLHEAAA-KGKTDVCIGIYFAEHSSKSN-QYVYGIGGGTGCPMHKDRSCYLAHGADP 114
           N+     AA  +G  +V    +  +         ++    G      K  + ++A   + 
Sbjct: 198 NYYAFRWAAVGRGHHNVI--NFLLDCPVMLAYAEIHEFEYG-----EKYVNPFIARHVNR 250

Query: 115 FLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLP 174
               +E      L+  + V  L+  +                                L 
Sbjct: 251 ---LKEMHDAFKLSNPDGVFDLVTKSECLQ------GFYM------------------LR 283

Query: 175 PPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLI 234
              + +            S P   AL     P+          L  A   G+     +L+
Sbjct: 284 NLIRRNDEVLLDDIRFLLSIPGIKAL----APTATIPGDANELLRLALRLGNQGACALLL 339

Query: 235 KAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGA 271
              + +           +   +  RL++ ++ L    
Sbjct: 340 SIPSVLALTKA---NNYYINETGGRLDLRAVALEHHH 373

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 79.6 bits (196), Expect = 1e-15
 Identities = 35/266 (13%), Positives = 75/266 (28%), Gaps = 54/266 (20%)

Query: 369 DNGQSGGYTALQVAGENS-----KKLLQEPPSVV--DLESQ----LLEASKGGDMTVVTR 417
              Q+  Y A ++A EN       +L +  P+ +   ++++       A++ G + V+ R
Sbjct: 122 KVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNR 181

Query: 418 LLSSCPHIVNCRDLDGRHSTPLHFAAGYN-RVAVVEYLLAHGADVHSKDNATDKWGF--- 473
           L    P       +   +     +AA       V+ +LL     +   +    ++G    
Sbjct: 182 LCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYV 240

Query: 474 ---------------TPLHEAAQKGRTQLSALLPLSPSAAND---PLRELFEACKGGDLT 515
                               +   G   L     ++ S        LR L        L 
Sbjct: 241 NPFIARHVNRLKEMHDAFKLSNPDGVFDL-----VTKSECLQGFYMLRNLIRRNDEVLLD 295

Query: 516 KVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADL 575
            ++ L++   + A                   L  A   G+     +L+   + + +   
Sbjct: 296 DIRFLLSIPGIKALAPTATIPG-----DANELLRLALRLGNQGACALLLSIPSVLALTKA 350

Query: 576 WKFTPLHEAA-------AKALLQHGA 594
                 +              L+H  
Sbjct: 351 ---NNYYINETGGRLDLRAVALEHHH 373

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 75.0 bits (184), Expect = 4e-14
 Identities = 15/71 (21%), Positives = 19/71 (26%), Gaps = 2/71 (2%)

Query: 5   DVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD--NWNFTPLH 62
           D +  LL S   +             A   GH  V+  L E             N+    
Sbjct: 109 DTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFR 168

Query: 63  EAAAKGKTDVC 73
            AA  G   V 
Sbjct: 169 LAAENGHLHVL 179

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 74.2 bits (182), Expect = 5e-14
 Identities = 20/145 (13%), Positives = 34/145 (23%), Gaps = 20/145 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +     V V     +     AA  G   ++  L +                         
Sbjct: 115  LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA------------- 161

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
                     A   AA+ G+L  + +L            Q  N      AA  + H  +  
Sbjct: 162  -----ENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVIN 216

Query: 1183 VTLGKSFLQFNAIKMAHAPPGHHSV 1207
              L    +     ++     G   V
Sbjct: 217  FLLDCP-VMLAYAEIHEFEYGEKYV 240

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 68.0 bits (166), Expect = 6e-12
 Identities = 32/255 (12%), Positives = 58/255 (22%), Gaps = 53/255 (20%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDL--WQFTPLHEAASKS-RLEVCSLLLSEGADP 273
               A   GH  V   L +         +    +     AA       V + LL      
Sbjct: 166 AFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVML 225

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT 333
                H     +      + + ++   + H   +A +  +P  V      D+V       
Sbjct: 226 AYAEIHEFEYGEKYVNPFIARHVNRLKEMH---DAFKLSNPDGVF-----DLVTKSECLQ 277

Query: 334 GDTPLP------GTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSK 387
           G   L         +L+D +        +                      L++      
Sbjct: 278 GFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP---TATIPG---DANELLRL------ 325

Query: 388 KLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNR 447
                             A + G+      LLS          L    +   +      R
Sbjct: 326 ------------------ALRLGNQGACALLLS------IPSVLALTKANNYYINETGGR 361

Query: 448 VAVVEYLLAHGADVH 462
           + +    L H    H
Sbjct: 362 LDLRAVALEHHHHHH 376

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 59.6 bits (144), Expect = 3e-09
 Identities = 21/123 (17%), Positives = 33/123 (26%), Gaps = 4/123 (3%)

Query: 679 ACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN 738
                  +R  K L SD          +     A  +        +  L+     +    
Sbjct: 68  CLYYAHYNRNAKQLWSDAHKKG--IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQ 125

Query: 739 KELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVL--GQTALHRTARDDKTQAVRVLLSH 796
            E      LAA+ GHL VL+ L  L     +  +      A    A +     +  L   
Sbjct: 126 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCEL 185

Query: 797 NAD 799
              
Sbjct: 186 APT 188

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 52.6 bits (126), Expect = 4e-07
 Identities = 22/143 (15%), Positives = 33/143 (23%), Gaps = 25/143 (17%)

Query: 675 CLLEACRQGDPSRVK--KFLTSD--VVNFKHPYTGDTPLHCAVTSPYPKRKA------IV 724
               A   G  S +     L +   +V              A         A      ++
Sbjct: 95  ICFVAAITGCSSALDTLCLLLTSDEIVKVIQAE-NYQAFRLA---------AENGHLHVL 144

Query: 725 ESLIRKGAHLNEKNKEL--LAPIHLAADLGHLDVLDTLLRLGAKVNLVDV--LGQTALHR 780
             L            +        LAA+ GHL VL+ L  L        +      A   
Sbjct: 145 NRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRW 204

Query: 781 TA-RDDKTQAVRVLLSHNADTSI 802
            A        +  LL      + 
Sbjct: 205 AAVGRGHHNVINFLLDCPVMLAY 227

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 49.2 bits (117), Expect = 5e-06
 Identities = 8/48 (16%), Positives = 12/48 (25%)

Query: 1063 NVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDG 1110
             +K  A            L  A   G      LLL   +  +    + 
Sbjct: 305  GIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKANN 352

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 43.0 bits (101), Expect = 5e-04
 Identities = 7/49 (14%), Positives = 17/49 (34%), Gaps = 3/49 (6%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN 49
            G +     LL+  + +        +  +   + G  D+  + LE   +
Sbjct: 329 LGNQGACALLLSIPSVLALTKA---NNYYINETGGRLDLRAVALEHHHH 374

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 87.6 bits (218), Expect = 9e-21
 Identities = 31/146 (21%), Positives = 50/146 (34%), Gaps = 46/146 (31%)

Query: 442 AAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDP 501
            + ++       L+  G+ + S            L EAA+ G+     +L ++       
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLG-------KKLLEAARAGQDDEVRIL-MA------- 45

Query: 502 LRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTE 561
                    G D            V A+D  G   TPLH AA           GH EV +
Sbjct: 46  --------NGAD------------VAAKDKNGS--TPLHLAA---------RNGHLEVVK 74

Query: 562 MLVKHGANVNVADLWKFTPLHEAAAK 587
           +L++ GA+V   D +  T    +   
Sbjct: 75  LLLEAGADVXAQDKFGKTAFDISIDN 100

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 86.1 bits (214), Expect = 3e-20
 Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 34/138 (24%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           +        L+  G+ + +        L  A   G  D VR+L+   A+   +D    TP
Sbjct: 4   HHHHHHSSGLVPRGSHMGSD---LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTP 60

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH AA  G  +V              + +                  L  GAD   +++ 
Sbjct: 61  LHLAARNGHLEVV-------------KLL------------------LEAGADVXAQDKF 89

Query: 121 GQTPLDLTVAEDVRSLLQ 138
           G+T  D+++      L +
Sbjct: 90  GKTAFDISIDNGNEDLAE 107

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 7/72 (9%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLK 599
            L  A   G  +   +L+ +GA+V   D    TPLH AA        K LL+ GAD+  +
Sbjct: 27  KLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQ 86

Query: 600 NTDGKTALDLAV 611
           +  GKTA D+++
Sbjct: 87  DKFGKTAFDISI 98

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 82.2 bits (204), Expect = 7e-19
 Identities = 27/71 (38%), Positives = 35/71 (49%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
            L  A   G  +   +L+  GA+V A D    TPLH AA    LEV  LLL  GAD    
Sbjct: 27  KLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQ 86

Query: 277 NCHSKSAIDVA 287
           +   K+A D++
Sbjct: 87  DKFGKTAFDIS 97

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 77.2 bits (191), Expect = 4e-17
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 10/67 (14%)

Query: 551 ACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDG 603
             S+ H+  +  LV  G+++  +DL     L EAA        + L+ +GAD+  K+ +G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG-SDLG--KKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 604 KTALDLA 610
            T L LA
Sbjct: 58  STPLHLA 64

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 74.5 bits (184), Expect = 4e-16
 Identities = 37/158 (23%), Positives = 53/158 (33%), Gaps = 49/158 (31%)

Query: 406 ASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD 465
            S        + L+    H+      D      L  AA   +   V  L+A+GADV    
Sbjct: 1   GSSHHHHHHSSGLVPRGSHM----GSDLG--KKLLEAARAGQDDEVRILMANGADV---- 50

Query: 466 NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQT 525
            A DK G TPLH AA+ G  ++  LL L                 G D            
Sbjct: 51  AAKDKNGSTPLHLAARNGHLEVVKLL-LE---------------AGAD------------ 82

Query: 526 VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEML 563
           V A+D  G+                +   G+ ++ E+L
Sbjct: 83  VXAQDKFGK-----------TAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 73.4 bits (181), Expect = 8e-16
 Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            + +GA+V   D    TPLH AA  G  ++V+LLL+ GAD   +++ G T  D+ +  G++
Sbjct: 44   MANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNE 103

Query: 1123 DVSDLLR 1129
            D++++L+
Sbjct: 104  DLAEILQ 110

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 73.0 bits (180), Expect = 1e-15
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 26/110 (23%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            V  G+++  +DL     L EAA  G+ D VR+L+ +GAD + K+++G+TPL L       
Sbjct: 14   VPRGSHMG-SDLG--KKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHL------- 63

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
                         AA+ G+L  V+ LL A  ++  +D  G+  T   ++ 
Sbjct: 64   -------------AARNGHLEVVKLLLEAGADVXAQDKFGK--TAFDISI 98

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 71.8 bits (177), Expect = 4e-15
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 721 KAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHR 780
                 L+ +G+H+          +  AA  G  D +  L+  GA V   D  G T LH 
Sbjct: 7   HHHSSGLVPRGSHMGSDLG---KKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHL 63

Query: 781 TARDDKTQAVRVLLSHNAD 799
            AR+   + V++LL   AD
Sbjct: 64  AARNGHLEVVKLLLEAGAD 82

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
               L  A  +    +   V  L+  GA +  K+K    P+HLAA  GHL+V+  LL  G
Sbjct: 24  LGKKLLEAARA---GQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG 80

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVL 793
           A V   D  G+TA   +  +       +L
Sbjct: 81  ADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 221 ACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGAD 272
             S+ H   +  L+  G+++ + DL     L EAA   + +   +L++ GAD
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS-DLG--KKLLEAARAGQDDEVRILMANGAD 49

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 57.6 bits (140), Expect = 3e-10
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLL 266
           PLH A   GH EV ++L++AGA+V A D +  T    +      ++  +L
Sbjct: 60  PLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 54.5 bits (132), Expect = 4e-09
 Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 26/90 (28%)

Query: 1084 AAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAAKKGNL 1143
             ++         L+  G+       D                        LL+AA+ G  
Sbjct: 1    GSSHHHHHHSSGLVPRGSH---MGSDLGKK--------------------LLEAARAGQD 37

Query: 1144 GRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
              V+ L+    ++  +D  G   TPLHLAA
Sbjct: 38   DEVRILMANGADVAAKDKNGS--TPLHLAA 65

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLL 43
            G  +VV+ LL +GA + A+D  G      +   G+ D+  +L
Sbjct: 67  NGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 19/96 (19%), Positives = 27/96 (28%), Gaps = 36/96 (37%)

Query: 31  ACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVY 90
             S  H      L+   ++  +        L EAA  G+ D                   
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLG---KKLLEAARAGQDDE------VR---------- 41

Query: 91  GIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPL 125
                            L A+GAD   K++ G TPL
Sbjct: 42  ----------------ILMANGADVAAKDKNGSTPL 61

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 748 AADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD 799
            +   H      L+  G+ +   D      L   AR  +   VR+L+++ AD
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG-SD--LGKKLLEAARAGQDDEVRILMANGAD 49

>3smj_A Poly [ADP-ribose] polymerase 14; diphtheria toxin like fold, transferase, NAD+, ADP-ribosylat transferase-transferase inhibitor complex; HET: FDR; 1.50A {Homo sapiens} PDB: 3goy_A* 3smi_A* 3se2_A* Length = 193

 Score = 83.9 bits (207), Expect = 2e-18
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 15/102 (14%)

Query: 871 QPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERY 930
           Q    +++LL  D E+ TVA +   T              S + I +I+++QN  LW  Y
Sbjct: 6   QQNFCVVELLPSDPEYNTVASKFNQTC-------------SHFRIEKIERIQNPDLWNSY 52

Query: 931 VHRRAEVADENGGQAHERMLFHGSP--FINAIVQKGFDERHA 970
             ++  +  +NG   +E+ LFHG+    +  + + GF+  +A
Sbjct: 53  QAKKKTMDAKNGQTMNEKQLFHGTDAGSVPHVNRNGFNRSYA 94

>3hkv_A PARP-10, poly [ADP-ribose] polymerase 10; NAD, transferase, structural genomics, structural genomics consortium, SGC, cytoplasm, glycosyltransferase; HET: 3AB; 2.10A {Homo sapiens} Length = 217

 Score = 83.6 bits (206), Expect = 4e-18
 Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 11/108 (10%)

Query: 865 SSPSFSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNR 924
           +  +   P   L  L  +  EF  V      T+   R +           ++R+++V + 
Sbjct: 2   AGQTLKGPWNNLERLAENTGEFQEVVRAFYDTLDAARSS---------IRVVRVERVSHP 52

Query: 925 KLWERYVHRRAEVADENGGQAHERMLFHGSP--FINAIVQKGFDERHA 970
            L ++Y   R  +      +  E++L+HG+    +  I   GF+    
Sbjct: 53  LLQQQYELYRERLLQRCERRPVEQVLYHGTTAPAVPDICAHGFNRSFC 100

>3blj_A Poly(ADP-ribose) polymerase 15; PARP, BAL-3, SGC, structural GE consortium, glycosyltransferase, NAD, nucleus; 2.20A {Homo sapiens} PDB: 3gey_A* Length = 221

 Score = 80.5 bits (198), Expect = 6e-17
 Identities = 26/129 (20%), Positives = 53/129 (41%), Gaps = 19/129 (14%)

Query: 848 SAYGYRHKLLKGIEKLCSSPS----FSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDN 903
            + G          +  + P      +     ++ L     E+ T+ ++   T       
Sbjct: 7   HSSGVDLGTENLYFQSMNLPEHWTDMNHQLFCMVQLEPGQSEYNTIKDKFTRT------- 59

Query: 904 GQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSP--FINAIV 961
                  S Y I +I+++QN  LW+ Y  ++ ++  +N  + +ER+LFHG+    +  + 
Sbjct: 60  ------CSSYAIEKIERIQNAFLWQSYQVKKRQMDIKNDHKNNERLLFHGTDADSVPYVN 113

Query: 962 QKGFDERHA 970
           Q GF+   A
Sbjct: 114 QHGFNRSCA 122

>3blj_A Poly(ADP-ribose) polymerase 15; PARP, BAL-3, SGC, structural GE consortium, glycosyltransferase, NAD, nucleus; 2.20A {Homo sapiens} PDB: 3gey_A* Length = 221

 Score = 42.4 bits (99), Expect = 4e-04
 Identities = 13/52 (25%), Positives = 17/52 (32%), Gaps = 5/52 (9%)

Query: 1179 LMCRVTLGKSFLQFNAIKMAHAPP-GHHSVMGRPSSGGLYFPEYVVYRGEQV 1229
            L    T G++ L     K  H P     SV     S       +VV+   Q 
Sbjct: 164  LTGVFTKGRAGLVTPPPKNPHNPTDLFDSVTNNTRSPK----LFVVFFDNQA 211

>2pqf_A Poly [ADP-ribose] polymerase 12; enzyme-inhibitor complex, catalytic fragment, structural GEN structural genomics consortium, SGC, transferase; HET: GAB CIT; 2.20A {Homo sapiens} Length = 198

 Score = 73.5 bits (180), Expect = 8e-15
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 16/109 (14%)

Query: 871 QPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERY 930
            PG   I L S  +E+  V      T                Y + +I++VQN  LWE Y
Sbjct: 9   DPGFQKITLSSSSEEYQKVWNLFNRT-------------LPFYFVQKIERVQNLALWEVY 55

Query: 931 VHRRAEVADENGGQAH-ERMLFHGSP--FINAIVQKGFDERHAIRYVHR 976
             ++ ++  +NGG+A  ER LFHG+   F++AI Q+ FD R    +   
Sbjct: 56  QWQKGQMQKQNGGKAVDERQLFHGTSAIFVDAICQQNFDWRVCGVHGTS 104

>2pqf_A Poly [ADP-ribose] polymerase 12; enzyme-inhibitor complex, catalytic fragment, structural GEN structural genomics consortium, SGC, transferase; HET: GAB CIT; 2.20A {Homo sapiens} Length = 198

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 9/56 (16%), Positives = 19/56 (33%), Gaps = 1/56 (1%)

Query: 1175 KRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFP-EYVVYRGEQV 1229
               + + RV +G+      +     A  G  +         +  P  +V++   QV
Sbjct: 128  THTMFLARVLVGEFVRGNASFVRPPAKEGWSNAFYDSCVNSVSDPSIFVIFEKHQV 183

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 72.7 bits (178), Expect = 7e-14
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 24/152 (15%)

Query: 494 SPSAANDPLRELFEACKGGDLTKVKKLVNP-----QTVNARDTAGRKSTPLHFAAGLVPL 548
             +     L  L EA K  D+  + +         + +   +      T LH A      
Sbjct: 123 KHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAV----- 177

Query: 549 HNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNT 601
             +       + + LV++  N++       T LH           K LL+  A I + N 
Sbjct: 178 -RSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANE 236

Query: 602 DGKTALDLAVPCTRAVLSGDHKKEELLEAARM 633
            G+T LD+      A        EELL  A  
Sbjct: 237 SGETPLDI------AKRLKHEHCEELLTQALS 262

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 69.3 bits (169), Expect = 8e-13
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 1059 LTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-V 1117
            +    V++  N++       T LH       A+ ++LLL+  A     N  G TPLD+  
Sbjct: 187  IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 246

Query: 1118 REGDQDVSDLLR 1129
            R   +   +LL 
Sbjct: 247  RLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 66.6 bits (162), Expect = 7e-12
 Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 6/145 (4%)

Query: 656 CCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYT-----GDTPL 709
             +             K H L EA +  D   + +     V +  K P        +T L
Sbjct: 114 YMERRYARKKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETAL 173

Query: 710 HCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNL 769
           H AV S       IV+ L++   +L+++  +    +H      + + L  LLR  A + +
Sbjct: 174 HLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEI 233

Query: 770 VDVLGQTALHRTARDDKTQAVRVLL 794
            +  G+T L    R        +L 
Sbjct: 234 ANESGETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 63.1 bits (153), Expect = 9e-11
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 10/97 (10%)

Query: 217 PLHNACSYG---HFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
            LH A          + + L++   N++       T LH        E   LLL   A  
Sbjct: 172 ALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASI 231

Query: 274 TLHNCHSKSAIDVAPTRE-------LQQRLSNEFKGH 303
            + N   ++ +D+A   +       L Q LS  F  H
Sbjct: 232 EIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSH 268

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 59.6 bits (144), Expect = 1e-09
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 8/111 (7%)

Query: 383 GENSKKLLQEPPSVVDLESQLLEASKGGDMTVV--TRLLSSCPHIVNCRDLDGRHSTPLH 440
           G +  + +         E+ L  A +  D T +     L      ++ +   G   T LH
Sbjct: 153 GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGS--TALH 210

Query: 441 FAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           +    +    ++ LL   A +       ++ G TPL  A +        LL
Sbjct: 211 YCCLTDNAECLKLLLRGKASI----EIANESGETPLDIAKRLKHEHCEELL 257

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 57.7 bits (139), Expect = 5e-09
 Identities = 15/67 (22%), Positives = 29/67 (43%)

Query: 6   VVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAA 65
           +V++L+ +  ++  +   G   LH  C   +A+ ++LLL   A+    +    TPL  A 
Sbjct: 187 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 246

Query: 66  AKGKTDV 72
                  
Sbjct: 247 RLKHEHC 253

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 54.2 bits (130), Expect = 8e-08
 Identities = 22/145 (15%), Positives = 44/145 (30%), Gaps = 38/145 (26%)

Query: 446 NRVAVVEYLLAHGADVHSKDNATD--KWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLR 503
             +  +    A G D+  K    +  +   T LH A +        ++            
Sbjct: 141 RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL--------- 191

Query: 504 ELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEML 563
                           + N   ++ +   G   T LH+          C   + E  ++L
Sbjct: 192 ----------------VQNSGNLDKQTGKGS--TALHYC---------CLTDNAECLKLL 224

Query: 564 VKHGANVNVADLWKFTPLHEAAAKA 588
           ++  A++ +A+    TPL  A    
Sbjct: 225 LRGKASIEIANESGETPLDIAKRLK 249

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 49.2 bits (117), Expect = 3e-06
 Identities = 21/152 (13%), Positives = 36/152 (23%), Gaps = 44/152 (28%)

Query: 7   VEYLLASGA------SIHARDDGGLHPLHNACSFG---HADVVRLLLEADANPNTRDNWN 57
           +    A G        +    +     LH A          +V  L++   N + +    
Sbjct: 146 LLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKG 205

Query: 58  FTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLK 117
            T LH        +                                    L   A   + 
Sbjct: 206 STALHYCCLTDNAECL-------------------------------KLLLRGKASIEIA 234

Query: 118 NQEGQTPLDLTV----AEDVRSLLQDAMAQYP 145
           N+ G+TPLD+            L Q    ++ 
Sbjct: 235 NESGETPLDIAKRLKHEHCEELLTQALSGRFN 266

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 48.5 bits (115), Expect = 6e-06
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 744 PIHLA---ADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADT 800
            +HLA    D   L ++D L++    ++     G TALH     D  + +++LL   A  
Sbjct: 172 ALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASI 231

Query: 801 SIV 803
            I 
Sbjct: 232 EIA 234

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 13/49 (26%), Positives = 20/49 (40%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN 49
               + ++ LL   ASI   ++ G  PL  A    H     LL +A + 
Sbjct: 215 TDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 46.9 bits (111), Expect = 2e-05
 Identities = 13/54 (24%), Positives = 21/54 (38%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLL 267
           G   LH  C   + E  ++L++  A++   +    TPL  A          LL 
Sbjct: 205 GSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 46.9 bits (111), Expect = 2e-05
 Identities = 21/98 (21%), Positives = 31/98 (31%), Gaps = 26/98 (26%)

Query: 1079 TPLHEAAAKGKAD---IVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLLRGNSAL 1134
            T LH A          IV  L+Q+  +  K+   G+T L       + +   LL    A 
Sbjct: 171  TALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA- 229

Query: 1135 LDAAKKGNLGRVQKLLTADNINCRDAQGRNSTPLHLAA 1172
                               +I   +  G   TPL +A 
Sbjct: 230  -------------------SIEIANESGE--TPLDIAK 246

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 70.8 bits (173), Expect = 4e-13
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVRE-GDQDV 1124
            +G +++       T LH AA   + D ++LLL+  A     N  G T LD+ R+   ++ 
Sbjct: 215  NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKEC 274

Query: 1125 SDLLR 1129
             +LL 
Sbjct: 275  EELLE 279

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 62.7 bits (152), Expect = 2e-10
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 214 GLVPLHNACSYGH---FEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEG 270
             + LH A    +     + + +I+ G +++A      T LH AA  ++ +   LLL   
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 271 ADPTLHNCHSKSAIDVA 287
           A     N   ++A+D+A
Sbjct: 250 ALVGTVNEAGETALDIA 266

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 25/89 (28%), Positives = 39/89 (43%)

Query: 705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG 764
            +  LH AV         +V+ +I+ G HL+ K  +    +H AA     D L  LL+  
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 765 AKVNLVDVLGQTALHRTARDDKTQAVRVL 793
           A V  V+  G+TAL    +    +   +L
Sbjct: 250 ALVGTVNEAGETALDIARKKHHKECEELL 278

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 57.3 bits (138), Expect = 1e-08
 Identities = 17/66 (25%), Positives = 31/66 (46%)

Query: 6   VVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAA 65
           +V++++ +G  + A+   G   LH A  +   D ++LLL+  A   T +    T L  A 
Sbjct: 208 LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIAR 267

Query: 66  AKGKTD 71
            K   +
Sbjct: 268 KKHHKE 273

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 56.5 bits (136), Expect = 2e-08
 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 350 DKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKG 409
           +  F          +     N            G++  + L  P +    E  L  A K 
Sbjct: 141 EHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKV 200

Query: 410 GDMT---VVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDN 466
            +     +V  ++ +  H ++ +  DG   T LH+AA YN+   ++ LL   A V     
Sbjct: 201 ANQASLPLVDFIIQNGGH-LDAKAADGN--TALHYAALYNQPDCLKLLLKGRALV----G 253

Query: 467 ATDKWGFTPLHEAAQKGRTQLSALL 491
             ++ G T L  A +K   +   LL
Sbjct: 254 TVNEAGETALDIARKKHHKECEELL 278

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 55.0 bits (132), Expect = 5e-08
 Identities = 37/201 (18%), Positives = 54/201 (26%), Gaps = 70/201 (34%)

Query: 435 HSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKW--GFTPLHEAAQKGRTQLSALLP 492
               L  A     +  V    A+G D        D        LH A +        L+ 
Sbjct: 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVD 210

Query: 493 LSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNAC 552
                                      + N   ++A+   G   T LH+AA         
Sbjct: 211 F-------------------------IIQNGGHLDAKAADGN--TALHYAA--------- 234

Query: 553 SYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVP 612
            Y   +  ++L+K  A V                             N  G+TALD+   
Sbjct: 235 LYNQPDCLKLLLKGRALVGT--------------------------VNEAGETALDI--- 265

Query: 613 CTRAVLSGDHKKEELLEAARM 633
              A      + EELLE A+ 
Sbjct: 266 ---ARKKHHKECEELLEQAQA 283

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 49.6 bits (118), Expect = 3e-06
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 14/119 (11%)

Query: 727 LIRKGAHLNEKNKELLA------PIHLA---ADLGHLDVLDTLLRLGAKVNLVDVLGQTA 777
               G    +      A       +HLA   A+   L ++D +++ G  ++     G TA
Sbjct: 170 AFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229

Query: 778 LHRTARDDKTQAVRVLLSHNADTSIV-----SLLVIFSCSTNLGLKHLLELFEREQITL 831
           LH  A  ++   +++LL   A    V     + L I     +   + LLE  +      
Sbjct: 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 288

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 49.2 bits (117), Expect = 4e-06
 Identities = 22/149 (14%), Positives = 36/149 (24%), Gaps = 44/149 (29%)

Query: 9   YLLASGASI------HARDDGGLHPLHNACSFGHAD---VVRLLLEADANPNTRDNWNFT 59
              A+G                   LH A    +     +V  +++   + + +     T
Sbjct: 169 EAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT 228

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
            LH AA   + D                                    L   A     N+
Sbjct: 229 ALHYAALYNQPDCL-------------------------------KLLLKGRALVGTVNE 257

Query: 120 EGQTPLDLTV----AEDVRSLLQDAMAQY 144
            G+T LD+       E    L Q     +
Sbjct: 258 AGETALDIARKKHHKECEELLEQAQAGTF 286

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 48.1 bits (114), Expect = 9e-06
 Identities = 20/118 (16%), Positives = 31/118 (26%), Gaps = 32/118 (27%)

Query: 1064 VKHGANVNVADLWKF------TPLHEAAAKGKAD---IVRLLLQHGADPSKKNRDGATPL 1114
              +G +                 LH A          +V  ++Q+G     K  DG T L
Sbjct: 171  FANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230

Query: 1115 DLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLA 1171
                                  AA       ++ LL     +   +  G   T L +A
Sbjct: 231  HY--------------------AALYNQPDCLKLLLKGRALVGTVNEAGE--TALDIA 266

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN-PNTRDNWNF 58
           Y + D ++ LL   A +   ++ G   L  A    H +   LL +A A       + ++
Sbjct: 236 YNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDY 294

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 44.2 bits (104), Expect = 2e-04
 Identities = 18/66 (27%), Positives = 24/66 (36%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G   LH A  Y   +  ++L+K  A V  ++    T L  A  K   E   LL    A  
Sbjct: 226 GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285

Query: 274 TLHNCH 279
                H
Sbjct: 286 FAFPLH 291

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 69.8 bits (170), Expect = 1e-12
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVRE-GDQ 1122
            +++GANVN AD     PLH A   G   +  L L+ GAD   ++ +G  PL +  E  + 
Sbjct: 255  LQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANA 314

Query: 1123 DVSDLLRGNSALLDAAKKGNLG 1144
            D+  LLR        A +G  G
Sbjct: 315  DIVTLLRLAKMREAEAAQGQAG 336

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 67.5 bits (164), Expect = 7e-12
 Identities = 30/154 (19%), Positives = 44/154 (28%), Gaps = 2/154 (1%)

Query: 134 RSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTS 193
           R   +      P  P        P   +       +++    P              PT 
Sbjct: 157 RRGGRGRPRGQPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHPPSLPTM 216

Query: 194 PPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHE 253
                    V   +G        PL  A +       E L++ GANVN  D     PLH 
Sbjct: 217 ADALAHGADVNWVNGGQD--NATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHH 274

Query: 254 AASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
           A       +  L L  GAD    +   +  + +A
Sbjct: 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIA 308

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 55.6 bits (133), Expect = 5e-08
 Identities = 22/67 (32%), Positives = 33/67 (49%)

Query: 6   VVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAA 65
             E+LL +GA+++  D  G  PLH+A   GH  +  L L+  A+   RD+    PL  A 
Sbjct: 250 ACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAM 309

Query: 66  AKGKTDV 72
                D+
Sbjct: 310 ETANADI 316

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 55.6 bits (133), Expect = 5e-08
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 4/110 (3%)

Query: 382 AGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHF 441
           +  +  +   E    +   + L  AS             +    VN  +    ++TPL  
Sbjct: 182 SLRSKPEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQ 241

Query: 442 AAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           A   N +   E+LL +GA+V    N  D  G  PLH A   G T L+ L 
Sbjct: 242 ATAANSLLACEFLLQNGANV----NQADSAGRGPLHHATILGHTGLACLF 287

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 54.8 bits (131), Expect = 8e-08
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 4/106 (3%)

Query: 692 LTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADL 751
             +DV          TPL  A  +         E L++ GA++N+ +     P+H A  L
Sbjct: 222 HGADVNWVNGGQDNATPLIQATAANSL---LACEFLLQNGANVNQADSAGRGPLHHATIL 278

Query: 752 GHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN 797
           GH  +    L+ GA +   D  G+  L   A +     +  LL   
Sbjct: 279 GHTGLACLFLKRGADLGARDSEGRDPLT-IAMETANADIVTLLRLA 323

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 54.8 bits (131), Expect = 9e-08
 Identities = 34/155 (21%), Positives = 50/155 (32%), Gaps = 37/155 (23%)

Query: 10  LLASGASIHARDDG--GLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAK 67
            LA GA ++  + G     PL  A +         LL+  AN N  D+    PLH A   
Sbjct: 219 ALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278

Query: 68  GKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDL 127
           G T +                                  +L  GAD   ++ EG+ PL +
Sbjct: 279 GHTGLA-------------------------------CLFLKRGADLGARDSEGRDPLTI 307

Query: 128 TV----AEDVRSLLQDAMAQYPGAPSCAETASVPP 158
            +    A+ V  L    M +   A   A   +   
Sbjct: 308 AMETANADIVTLLRLAKMREAEAAQGQAGDETYLD 342

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 52.9 bits (126), Expect = 4e-07
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 7/111 (6%)

Query: 390 LQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVA 449
           +       D  + L++A+    +     LL +  ++ N  D  GR   PLH A       
Sbjct: 226 VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGR--GPLHHATILGHTG 282

Query: 450 VVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAAND 500
           +    L  GAD+ ++D+     G  PL  A +     +  LL L+     +
Sbjct: 283 LACLFLKRGADLGARDSE----GRDPLTIAMETANADIVTLLRLAKMREAE 329

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 49.0 bits (116), Expect = 6e-06
 Identities = 38/181 (20%), Positives = 56/181 (30%), Gaps = 73/181 (40%)

Query: 454 LLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGD 513
            LAHGADV+  +   D    TPL +A           L                      
Sbjct: 219 ALAHGADVNWVNGGQD--NATPLIQATAANSLLACEFL---------------------- 254

Query: 514 LTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVA 573
                 L N   VN  D           +AG  PLH+A   GH  +              
Sbjct: 255 ------LQNGANVNQAD-----------SAGRGPLHHATILGHTGL-------------- 283

Query: 574 DLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARM 633
                       A   L+ GAD+  ++++G+  L +A+       + +     LL  A+M
Sbjct: 284 ------------ACLFLKRGADLGARDSEGRDPLTIAME------TANADIVTLLRLAKM 325

Query: 634 M 634
            
Sbjct: 326 R 326

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 47.1 bits (111), Expect = 3e-05
 Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 5/121 (4%)

Query: 685 PSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN--KELL 742
           P  ++        +    + G      +   P       +   +  GA +N  N  ++  
Sbjct: 180 PGSLRSKPEPPSEDLGSLHPGALLFRASGHPPSL---PTMADALAHGADVNWVNGGQDNA 236

Query: 743 APIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSI 802
            P+  A     L   + LL+ GA VN  D  G+  LH       T    + L   AD   
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296

Query: 803 V 803
            
Sbjct: 297 R 297

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 45.2 bits (106), Expect = 9e-05
 Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 25/109 (22%)

Query: 1066 HGANVN--VADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            HGA+VN         TPL +A A         LLQ+GA+ ++ +  G  PL         
Sbjct: 222  HGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHH------- 274

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLA 1171
                         A   G+ G     L    ++  RD++GR   PL +A
Sbjct: 275  -------------ATILGHTGLACLFLKRGADLGARDSEGR--DPLTIA 308

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 43.2 bits (101), Expect = 4e-04
 Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 10/176 (5%)

Query: 97  GCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASV 156
              +   R         P +  +    P   ++        +D  + +PGA     +   
Sbjct: 151 LPEIRGRRGGRGRPRGQPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHP 210

Query: 157 P-PPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAV---- 211
           P  P+     + G +V+     Q + +      L   +    L     ++ +G  V    
Sbjct: 211 PSLPTMADALAHGADVNWVNGGQDNAT-----PLIQATAANSLLACEFLLQNGANVNQAD 265

Query: 212 ALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLL 267
           + G  PLH+A   GH  +  + +K GA++ A D     PL  A   +  ++ +LL 
Sbjct: 266 SAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLR 321

>2x5y_A Zinc finger CCCH-type antiviral protein 1; antiviral defense, immune system, transferase; 1.05A {Homo sapiens} Length = 173

 Score = 65.8 bits (160), Expect = 2e-12
 Identities = 17/103 (16%), Positives = 46/103 (44%), Gaps = 21/103 (20%)

Query: 870 SQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWER 929
           S     L ++     E++ V+E  +A+                + I +I+K++N +L ++
Sbjct: 1   SSKKYKLSEIHHLHPEYVRVSEHFKAS-------------MKNFKIEKIKKIENSELLDK 47

Query: 930 YVHRRAEVADENGGQAHERMLFHGSP--FINAIVQKGFDERHA 970
           +  +++++ +E       ++LF+ +   ++ +I    FD    
Sbjct: 48  FTWKKSQMKEE------GKLLFYATSRAYVESICSNNFDSFLH 84

>2x5y_A Zinc finger CCCH-type antiviral protein 1; antiviral defense, immune system, transferase; 1.05A {Homo sapiens} Length = 173

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 6/55 (10%)

Query: 1175 KRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPEYVVYRGEQV 1229
               + + +V +GK F++ N       PP   S +   S+       +V+++ +QV
Sbjct: 114  NVVMFVAQVLVGK-FIEGNI-TYTSPPPQFDSCVDTRSNPS----VFVIFQKDQV 162

>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} Length = 74

 Score = 59.7 bits (145), Expect = 2e-11
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 813 TNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQP 872
            +L ++    L  +E+I L+ L   +  DL+ + V   G R K+L  + +     +  +P
Sbjct: 10  ASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISV-PLGPREKILGAVRRR--RQAMERP 66

Query: 873 GTL 875
             L
Sbjct: 67  PAL 69

>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 83

 Score = 59.8 bits (145), Expect = 2e-11
 Identities = 19/62 (30%), Positives = 37/62 (59%)

Query: 812 STNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQ 871
             +  L+  ++ FERE+I+ D L  + H++L+ +GVS  G++  +L+ ++ LC+  S   
Sbjct: 22  GLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAVDLLCALNSGPS 81

Query: 872 PG 873
            G
Sbjct: 82  SG 83

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.2 bits (150), Expect = 1e-09
 Identities = 91/643 (14%), Positives = 176/643 (27%), Gaps = 207/643 (32%)

Query: 582  HEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRY 641
            H+   K +L    D  + N D K   D+     +++LS +     ++    + G    R 
Sbjct: 14   HQYQYKDILSVFEDAFVDNFDCKDVQDM----PKSILSKEEIDHIIMSKDAVSG--TLRL 67

Query: 642  TWPLGT---------------TDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPS 686
             W L +                +  +           M  IK E +            PS
Sbjct: 68   FWTLLSKQEEMVQKFVEEVLRINYKF----------LMSPIKTEQR-----------QPS 106

Query: 687  RVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYP-KRKAIVESLIRKGAHLNEKNKELLAPI 745
             +    T   +  +     D      V + Y   R      L R+   L E        I
Sbjct: 107  MM----TRMYIEQRDRLYNDNQ----VFAKYNVSRLQPYLKL-RQ--ALLELRPAKNVLI 155

Query: 746  H---------LAAD-------------------LGHL----DVLDTLLRLGAKV--NLVD 771
                      +A D                   L +      VL+ L +L  ++  N   
Sbjct: 156  DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215

Query: 772  VLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVI-------------FSCST----- 813
                ++  +         +R LL      +   LLV+              SC       
Sbjct: 216  RSDHSSNIKLRIHSIQAELRRLLKSKPYEN--CLLVLLNVQNAKAWNAFNLSCKILLTTR 273

Query: 814  --------------NLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKG 859
                          ++ L H       ++    +L        K +         ++L  
Sbjct: 274  FKQVTDFLSAATTTHISLDHHSMTLTPDE-VKSLLL-------KYLDCRPQDLPREVLTT 325

Query: 860  IEKLCSSP-SFSQPGTLLIDLLS-----DDKEFITVAEEMQATVR-----EHRDNGQSGG 908
                  +P   S     + D L+            +   +++++      E+R       
Sbjct: 326  ------NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 909  IFSRYNI-IRIQKVQNRKLWERYVHRRAE-VADENGGQAHERMLFHGSPFINAIVQKGFD 966
            +F   +  I    +    +W   +      V ++     H+  L         + ++  +
Sbjct: 380  VF-PPSAHIPTILLS--LIWFDVIKSDVMVVVNK----LHKYSL---------VEKQPKE 423

Query: 967  ERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERH-----------AYI 1015
               +I  ++   +V  EN    H  ++ H +      + K FD              ++I
Sbjct: 424  STISIPSIYLELKVKLENEYALHRSIVDHYN------IPKTFDSDDLIPPYLDQYFYSHI 477

Query: 1016 G---------GMFGAGKRV-----WLGDVK---QGVDQLSMAGGLETGTKKKKKNMYYGT 1058
            G               + V     +L + K         +    L T  + K    Y   
Sbjct: 478  GHHLKNIEHPERMTLFRMVFLDFRFL-EQKIRHDSTAWNASGSILNTLQQLKF---YKPY 533

Query: 1059 LTPHNVKHGANVNVADLWKFTPLHEAAA-KGK-ADIVRLLLQH 1099
            +  ++ K+   VN   +  F P  E      K  D++R+ L  
Sbjct: 534  ICDNDPKYERLVN--AILDFLPKIEENLICSKYTDLLRIALMA 574

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 2e-06
 Identities = 56/421 (13%), Positives = 111/421 (26%), Gaps = 125/421 (29%)

Query: 838  NHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQPGTLLIDLLSDDKEFITVAEEMQATV 897
            +H D  + G   Y Y+  +L           F            D+ +   V +  +   
Sbjct: 5    HHMDF-ETGEHQYQYK-DIL---------SVFEDA-------FVDNFDCKDVQDMPK--- 43

Query: 898  REHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGSPFI 957
                       I S+  I  I   ++         R          +  ++       F+
Sbjct: 44   ----------SILSKEEIDHIIMSKDA---VSGTLRLFWTLLSKQEEMVQK-------FV 83

Query: 958  NAIVQKGFD---ERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIV---------Q 1005
              +++  +        I+   R+  +      +  +R+      F    V         +
Sbjct: 84   EEVLRINYKFLMSP--IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR 141

Query: 1006 KGFDE--RHAYIG--GMFGAGKRVWLGDVKQGVD-QLSMAGG---LETGTKKKKK----- 1052
            +   E      +   G+ G+GK     DV      Q  M      L        +     
Sbjct: 142  QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201

Query: 1053 --NMYYGTLTPH---NVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKN 1107
               + Y  + P+      H +N+          L   + + +   +R LL+      K  
Sbjct: 202  LQKLLY-QIDPNWTSRSDHSSNI---------KLRIHSIQAE---LRRLLKS-----KPY 243

Query: 1108 RDGATPLD-----------------LVREGDQDVSDLLRGNSA---LLDAAKKGNLGRVQ 1147
             +    L                  L+    + V+D L   +     LD      L   +
Sbjct: 244  ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT-LTPDE 302

Query: 1148 KL-LTADNINC------RDAQGRNSTPLHLA-AGEKRHLLMCRVTLGKSFLQFNAIKMAH 1199
               L    ++C      R+    N  P  L+   E     +       ++   N  K+  
Sbjct: 303  VKSLLLKYLDCRPQDLPREVLTTN--PRRLSIIAESIRDGLATW---DNWKHVNCDKLTT 357

Query: 1200 A 1200
             
Sbjct: 358  I 358

>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 55.6 bits (134), Expect = 2e-09
 Identities = 15/55 (27%), Positives = 25/55 (45%)

Query: 812 STNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSS 866
                   LL+     +IT  +L  ++    + +GVS+ G R KLL  I++L   
Sbjct: 41  RGGFEEPVLLKNIRENEITGALLPCLDESRFENLGVSSLGERKKLLSYIQRLVQI 95

>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A Length = 76

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 814 NLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSS 866
           ++ L    + FE  +I    L  +  ED  ++GV+  G+R  + + + +L  S
Sbjct: 16  SIHLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRENIERALRQLDGS 68

>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens} Length = 80

 Score = 54.0 bits (130), Expect = 3e-09
 Identities = 17/54 (31%), Positives = 35/54 (64%)

Query: 812 STNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCS 865
             +  L+  ++ FERE+I+ D L  + H++L+ +GVS  G++  +L+ ++ LC+
Sbjct: 18  GLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAVDLLCA 71

>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens} Length = 100

 Score = 53.8 bits (129), Expect = 6e-09
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 794 LSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGY 852
           ++   D  I   L        + L+   + F R  + T      + HE+LKQ+G+SA G+
Sbjct: 21  MAAPQDLDIAVWL------ATVHLEQYADTFRRHGLATAGAARGLGHEELKQLGISATGH 74

Query: 853 RHKLLKGIEKLCSSPS 868
           R ++L+ ++      S
Sbjct: 75  RKRILRLLQTGTEEGS 90

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 58.8 bits (142), Expect = 8e-09
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVRE-GDQ 1122
            +++G +++       T LH AA   + D ++LLL+  A     N  G T LD+ R+   +
Sbjct: 194  IQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHK 253

Query: 1123 DVSDLLR 1129
            +  +LL 
Sbjct: 254  ECEELLE 260

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 47.6 bits (113), Expect = 2e-05
 Identities = 17/68 (25%), Positives = 31/68 (45%)

Query: 6   VVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAA 65
           +V++++ +G  + A+   G   LH A  +   D ++LLL+  A   T +    T L  A 
Sbjct: 189 LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIAR 248

Query: 66  AKGKTDVC 73
            K   +  
Sbjct: 249 KKHHKECE 256

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 45.7 bits (108), Expect = 8e-05
 Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 4/85 (4%)

Query: 1079 TPLHEAAA---KGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLLRGNSAL 1134
              LH A     +    +V  ++Q+G     K  DG T L         D   LL    AL
Sbjct: 173  LVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL 232

Query: 1135 LDAAKKGNLGRVQKLLTADNINCRD 1159
            +    +     +       +  C +
Sbjct: 233  VGTVNEAGETALDIARKKHHKECEE 257

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 44.5 bits (105), Expect = 2e-04
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRT 485
           ++ +  DG   T LH+AA YN+   ++ LL   A V + + A    G T L  A +K   
Sbjct: 200 LDAKAADGN--TALHYAALYNQPDCLKLLLKGRALVGTVNEA----GETALDIARKKHHK 253

Query: 486 QLSALL 491
           +   LL
Sbjct: 254 ECEELL 259

>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus} Length = 74

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 10/50 (20%), Positives = 26/50 (52%)

Query: 814 NLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
            L L   +  F  + I+ + L +++   LK +G+++   R  + K ++++
Sbjct: 18  GLSLDQYVSEFSAQNISGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEM 67

>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2 Length = 91

 Score = 52.2 bits (125), Expect = 2e-08
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCS 865
           ++ L+  L  F      T+   A +N   L+++G+S  G+R ++LK ++ + S
Sbjct: 24  SINLEQYLLHFHESGFTTVKDCAAINDSLLQKIGISPTGHRRRILKQLQIILS 76

>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens} Length = 81

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 814 NLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSP 867
           +L L    ++F R  I    L  +   DLK +GV+  G+  ++L GI++L  S 
Sbjct: 21  HLSLCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGIKELSRSS 74

>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2 Length = 94

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 10/51 (19%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
            + +    + F      TL+ +  M+ +DL ++G++A  +++K+L  ++ +
Sbjct: 35  AIKMDRYKDNFTAAGYTTLEAVVHMSQDDLARIGITAITHQNKILSSVQAM 85

>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2 Length = 81

 Score = 50.9 bits (122), Expect = 4e-08
 Identities = 10/51 (19%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           ++ +    + F      +L ++  MN +D++ +G++  G++ K+L  I+ +
Sbjct: 16  SIRMGRYRDHFAAGGYSSLGMVLRMNAQDVRALGITLMGHQKKILGSIQTM 66

>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens} Length = 83

 Score = 50.1 bits (120), Expect = 7e-08
 Identities = 10/51 (19%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
            + +    E F      + +++++++ EDL ++GV+  G++ K+L  ++ +
Sbjct: 24  AIKMGRYEESFAAAGFGSFELVSQISAEDLLRIGVTLAGHQKKILASVQHM 74

>2d3d_A VTS1 protein; RNA binding, SAM domain, SRE hairpin binding, RNA binding protein; 1.60A {Saccharomyces cerevisiae} PDB: 2f8k_A 2fe9_A Length = 88

 Score = 50.3 bits (120), Expect = 8e-08
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 814 NLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           +L L    +           L  ++ E L++ GV A G R KLLK    +
Sbjct: 27  SLRLHKYSDALS--GTPWIELIYLDDETLEKKGVLALGARRKLLKAFGIV 74

>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens} Length = 90

 Score = 50.2 bits (120), Expect = 8e-08
 Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 7/86 (8%)

Query: 779 HRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQI-TLDILAEM 837
           H  +   +    +         S+   L        + ++   + F      +L+ +A M
Sbjct: 5   HHHSSGRENLYFQGTPDFTTFCSVGEWL------QAIKMERYKDNFTAAGYNSLESVARM 58

Query: 838 NHEDLKQVGVSAYGYRHKLLKGIEKL 863
             ED+  +G++  G++ K++  I+ +
Sbjct: 59  TIEDVMSLGITLVGHQKKIMSSIQTM 84

>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 50.2 bits (120), Expect = 8e-08
 Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
            + +    + F      +L ++ +M  EDL ++G++  G++ K+L  I  +
Sbjct: 31  AIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGITLAGHQKKILNSIHSM 81

>2b6g_A VTS1P; alpha-helix, pentaloop, hairpin, RNA binding protein; NMR {Saccharomyces cerevisiae} Length = 119

 Score = 50.4 bits (120), Expect = 1e-07
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 814 NLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           +L L    +           L  ++ E L++ GV A G R KLLK    +
Sbjct: 58  SLRLHKYSDALS--GTPWIELIYLDDETLEKKGVLALGARRKLLKAFGIV 105

>2es6_A VTS1P; SAM domain, protein structure, gene regulation; NMR {Saccharomyces cerevisiae} PDB: 2ese_A Length = 101

 Score = 49.6 bits (118), Expect = 2e-07
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 814 NLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           +L L    +           L  ++ E L++ GV A G R KLLK    +
Sbjct: 40  SLRLHKYSDALS--GTPWIELIYLDDETLEKKGVLALGARRKLLKAFGIV 87

>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A Length = 82

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
            + +    E F      + D++++M  ED+ +VGV+  G++ K+L  I+ +
Sbjct: 20  AIKMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKILNSIQVM 70

>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 9/51 (17%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           ++ ++   E F       ++ + +M ++D+K++GV   G++ ++   +  L
Sbjct: 21  SIKMQQYTEHFMAAGYTAIEKVVQMTNDDVKRIGVRLPGHQKRIAYSLLGL 71

>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A Length = 82

 Score = 47.9 bits (114), Expect = 4e-07
 Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           ++ +K  +  F    + T++ + E+  EDL Q+G++  G++ ++L  I+  
Sbjct: 32  SIRMKRYILHFHSAGLDTMECVLELTAEDLTQMGITLPGHQKRILCSIQGF 82

>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} Length = 86

 Score = 47.2 bits (112), Expect = 7e-07
 Identities = 9/51 (17%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           ++ ++   E F       ++ + +M ++D+K++GV   G++ ++   +  L
Sbjct: 30  SIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLGL 80

>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens} Length = 82

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 9/51 (17%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           ++ ++   E F       ++ + +M ++D+K++GV   G++ ++   +  L
Sbjct: 25  SIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLGL 75

>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B Length = 86

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
            +GL+   E         L+ L+++  EDL++ GV    ++  LL  ++  
Sbjct: 35  AIGLERYEEGLVHNGWDDLEFLSDITEEDLEEAGVQDPAHKRLLLDTLQLS 85

>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster} Length = 78

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 11/49 (22%), Positives = 20/49 (40%)

Query: 815 LGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
                  +LF +  IT   L  +    L+++GV+    R  + + I K 
Sbjct: 20  GEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVKQ 68

>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2 Length = 91

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 12/51 (23%), Positives = 24/51 (47%)

Query: 814 NLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLC 864
            L        FE  Q+    L ++  + L+ + V + G++  +L G+E+L 
Sbjct: 25  GLDDSLQDYPFEDWQLPGKNLLQLCPQSLEALAVRSLGHQELILGGVEQLQ 75

>2eam_A Putative 47 kDa protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 80

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 814 NLGLKHLLELFEREQI-TLDILAE--MNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPS 868
           ++GL              +  +    M  +DL ++G+   G+R ++L+ I+ L S PS
Sbjct: 21  SIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPSGPS 78

>4dqy_C Poly [ADP-ribose] polymerase 1; PARP, poly(ADP-ribose) polymerase, DNA binding protein, ADP- transferase, PARP-like zinc finger, poly(ADP-ribosyl)ation; HET: DNA; 3.25A {Homo sapiens} PDB: 2cr9_A Length = 506

 Score = 50.7 bits (120), Expect = 2e-06
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 27/81 (33%)

Query: 1176 RHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGR------------------------- 1210
              +L+  V LG  +   +A  ++  P G HSV G                          
Sbjct: 401  GLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSANISLDGVDVPLGTGIS 460

Query: 1211 --PSSGGLYFPEYVVYRGEQV 1229
               +   L + EY+VY   QV
Sbjct: 461  SGVNDTSLLYNEYIVYDIAQV 481

>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A Length = 149

 Score = 47.0 bits (111), Expect = 4e-06
 Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
            +GL    ++        +D + ++  EDL+++G++  G++ KL+  + KL
Sbjct: 88  MIGLAQYYKVLVDNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVRKL 138

>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster} Length = 106

 Score = 45.8 bits (108), Expect = 4e-06
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 812 STNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
                     +LF +  IT   L  +    L+++GV+    R  + + I K 
Sbjct: 37  RHCGEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVKQ 88

>1efy_A Poly (ADP-ribose) polymerase; benzimidazole, inhibitor, catalytic fragment, transferase; HET: BZC; 2.20A {Gallus gallus} SCOP: a.41.1.1 d.166.1.2 PDB: 1a26_A* 1pax_A* 2paw_A 2pax_A* 3pax_A* 4pax_A* 2rcw_A* 1uk1_A* 1wok_A* 1uk0_A* 2rd6_A* 3gjw_A* 3gn7_A* 3l3l_A* 3l3m_A* Length = 350

 Score = 49.3 bits (117), Expect = 5e-06
 Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 27/81 (33%)

Query: 1176 RHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRP------------------------ 1211
              +L+  V LG  +   NA  +   P G HSV G                          
Sbjct: 256  GLILLGEVALGNMYELKNASHITKLPKGKHSVKGLGKTAPDPTATTTLDGVEVPLGNGIS 315

Query: 1212 ---SSGGLYFPEYVVYRGEQV 1229
               +   L + EY+VY   QV
Sbjct: 316  TGINDTCLLYNEYIVYDVAQV 336

>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2 Length = 78

 Score = 44.4 bits (105), Expect = 6e-06
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 814 NLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPS 868
            + L+            TLD L ++    L ++ ++    R +LL   E L S PS
Sbjct: 21  RIHLQEYTSTLLLNGYETLDDLKDIKESHLIELNIADPEDRARLLSAAESLLSGPS 76

>3c4h_A Poly(ADP-ribose) polymerase 3; enzyme-inhibitor complex, catalytic fragment, structural GEN structural genomics consortium, SGC; HET: DRL; 2.10A {Homo sapiens} PDB: 3c49_A* 2pa9_A* 3ce0_A* 3fhb_A* Length = 357

 Score = 48.2 bits (114), Expect = 9e-06
 Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 33/87 (37%)

Query: 1176 RHLLMCRVTLGKSFLQFNAIKMAHAPP-GHHSVMGR------------------------ 1210
             ++ +  V LG+            +PP G  SV+ R                        
Sbjct: 262  GYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQ 321

Query: 1211 --------PSSGGLYFPEYVVYRGEQV 1229
                     SS      EY++Y+  Q 
Sbjct: 322  GQPVPCPEFSSSTFSQSEYLIYQESQC 348

>3c4h_A Poly(ADP-ribose) polymerase 3; enzyme-inhibitor complex, catalytic fragment, structural GEN structural genomics consortium, SGC; HET: DRL; 2.10A {Homo sapiens} PDB: 3c49_A* 2pa9_A* 3ce0_A* 3fhb_A* Length = 357

 Score = 42.8 bits (100), Expect = 5e-04
 Identities = 19/118 (16%), Positives = 35/118 (29%), Gaps = 21/118 (17%)

Query: 869 FSQPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWE 928
           +      L  L S   E+  +   ++ T   HR             +  I KV      +
Sbjct: 144 YQLLKCQLQLLDSGAPEYKVIQTYLEQTGSNHRC----------PTLQHIWKVNQEGEED 193

Query: 929 RYVHRRAEVADENGGQAHERMLFHGSPFIN--AIVQKGFDERHAIRYVH-RRAEVADE 983
           R+          +    + ++L+HG+      AI+  G            +    A E
Sbjct: 194 RF--------QAHSKLGNRKLLWHGTNMAVVAAILTSGLRIMPHSGGRVGKGIYFASE 243

>3kjd_A Poly [ADP-ribose] polymerase 2; transferase, enzyme-inhibitor complex, catalytic fragment, S genomics, structural genomics consortium, SGC; HET: 78P; 1.95A {Homo sapiens} PDB: 3kcz_A* 1gs0_A Length = 368

 Score = 47.4 bits (112), Expect = 2e-05
 Identities = 19/85 (22%), Positives = 23/85 (27%), Gaps = 31/85 (36%)

Query: 1176 RHLLMCRVTLGKSFLQFNAIKMAHAPP-GHHSVMGR------------------------ 1210
              LL+  V LG+      A   A     G HS  G                         
Sbjct: 272  GLLLLSEVALGQCNELLEANPKAEGLLQGKHSTKGLGKMAPSSAHFVTLNGSTVPLGPAS 331

Query: 1211 ------PSSGGLYFPEYVVYRGEQV 1229
                  P    L + EY+VY   QV
Sbjct: 332  DTGILNPDGYTLNYNEYIVYNPNQV 356

>1ow5_A Serine/threonine-protein kinase STE11; MAP kinase, MAPKKK, SAM domain, pointed domain, SCM domain, STE50 regulator, transferase; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1x9x_A Length = 85

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 813 TNLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQ 871
             +G    L+ F +  + T + +  ++ + L  +GV+  G R K+L+  +         Q
Sbjct: 23  EEIGCTQYLDSFIQCNLVTEEEIKYLDKDILIALGVNKIGDRLKILRKSKSFQRDKRIEQ 82

>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens} Length = 103

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 814 NLGLKHLLELFEREQI-TLDILAE--MNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFS 870
           ++GL              +  +    M  +DL ++G+   G+R ++L+ I+ L       
Sbjct: 31  SIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIG 90

Query: 871 QPG 873
             G
Sbjct: 91  HDG 93

>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens} Length = 101

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 814 NLGLKHLLELFEREQI-TLDILAE--MNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFS 870
           ++GL+             +  L    M  +DL+ +G+S   +R KLL+    L    +  
Sbjct: 38  SIGLQQYESKLLLNGFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLLQAARSLPKVKALG 97

Query: 871 QPGT 874
             G 
Sbjct: 98  YDGN 101

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	1236
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.98
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.98
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.97
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.97
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.97
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.97
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.97
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.97
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.97
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.97
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.97
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.97
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.97
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.96
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.96
2rfa_A	232	Transient receptor potential cation channel subfa	99.96
2rfa_A	232	Transient receptor potential cation channel subfa	99.96
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.96
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.95
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.95
2pnn_A	273	Transient receptor potential cation channel subfa	99.95
2etb_A	256	Transient receptor potential cation channel subfam	99.95
2pnn_A	273	Transient receptor potential cation channel subfa	99.95
2etb_A	256	Transient receptor potential cation channel subfam	99.95
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.94
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.93
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.93
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.93
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.93
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.93
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.93
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.93
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.93
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.92
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.92
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.92
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.92
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.92
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.92
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.92
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.92
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.92
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.91
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.91
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.91
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.91
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.91
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.9
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.9
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.9
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.89
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.89
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.89
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.89
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.89
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.88
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.87
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.87
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.86
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.86
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.85
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.85
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.85
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.83
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.81
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.81
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.8
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.8
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.79
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.79
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.78
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.78
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.77
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.77
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.77
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.77
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.77
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.74
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.73
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.73
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.71
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.71
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.71
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.7
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.65
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.59
3u9h_A	240	Tankyrase-2; protein-ligand complex, diphtheria to	97.4
2kg5_A	100	ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-	93.46
2e8n_A	88	Ephrin type-A receptor 2; cell-free protein synthe	83.2
2kso_A	82	Ephrin type-A receptor 2; SAM domain, heterodimer,	82.37
3h8m_A	90	Ephrin type-A receptor 7; SAM domain, kinase,struc	82.15
1ucv_A	81	Ephrin type-A receptor 8; receptor oligomerization	82.13
3hkv_A	217	PARP-10, poly [ADP-ribose] polymerase 10; NAD, tra	81.39
1b4f_A	82	EPHB2; SAM domain, EPH receptor, signal transducti	81.06
3k1r_B	74	Usher syndrome type-1G protein; protein-protein co	81.02
2eao_A	99	Ephrin type-B receptor 1; cell-free protein synthe	80.66
1b0x_A	94	Protein (EPHA4 receptor tyrosine kinase); protein	80.45

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=8.4e-58  Score=545.78  Aligned_cols=399  Identities=31%  Similarity=0.383  Sum_probs=300.7

Q ss_pred             HcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccc
Q psy8898          12 ASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYG   91 (1236)
Q Consensus        12 ~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~   91 (1236)
                      +.|+++|..|..|+||||+||..|+.++|++|+++|+++|..|..|.||||+|+..|+.+++++                
T Consensus         2 ~~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~----------------   65 (437)
T 1n11_A            2 SPGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKY----------------   65 (437)
T ss_dssp             -------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHH----------------
T ss_pred             CCCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH----------------
Confidence            4689999999999999999999999999999999999999999999999999999999999988                


Q ss_pred             cCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCC
Q psy8898          92 IGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNV  171 (1236)
Q Consensus        92 ~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (1236)
                                     |+++|++++.++..|.||||+|+..|+.++++.|++......                       
T Consensus        66 ---------------Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-----------------------  107 (437)
T 1n11_A           66 ---------------LLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPN-----------------------  107 (437)
T ss_dssp             ---------------HHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT-----------------------
T ss_pred             ---------------HHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCC-----------------------
Confidence                           999999999999988888888888888888877776531100                       


Q ss_pred             CCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHH
Q psy8898         172 SLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPL  251 (1236)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL  251 (1236)
                                                           .....|.||||+|+..|+.++|++|++.|++++..+..|+|||
T Consensus       108 -------------------------------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L  150 (437)
T 1n11_A          108 -------------------------------------LATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPL  150 (437)
T ss_dssp             -------------------------------------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred             -------------------------------------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHH
Confidence                                                 0011377888888888888888888888888887788888888


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCC
Q psy8898         252 HEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHP  331 (1236)
Q Consensus       252 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~  331 (1236)
                      |+|+..|+.+++++|+++|++++..+..|.||                                                
T Consensus       151 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~------------------------------------------------  182 (437)
T 1n11_A          151 HVAAKYGKVRVAELLLERDAHPNAAGKNGLTP------------------------------------------------  182 (437)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCH------------------------------------------------
T ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCH------------------------------------------------
Confidence            88888888888888888888777766555544                                                


Q ss_pred             CCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCC
Q psy8898         332 YTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGD  411 (1236)
Q Consensus       332 ~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~  411 (1236)
                                                                                             |+.|+..|+
T Consensus       183 -----------------------------------------------------------------------L~~A~~~~~  191 (437)
T 1n11_A          183 -----------------------------------------------------------------------LHVAVHHNN  191 (437)
T ss_dssp             -----------------------------------------------------------------------HHHHHHTTC
T ss_pred             -----------------------------------------------------------------------HHHHHHcCC
Confidence                                                                                   344455566


Q ss_pred             HHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhc
Q psy8898         412 MTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL  491 (1236)
Q Consensus       412 ~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L  491 (1236)
                      .+++++|++. +..++..+.++  +||||+|+..|+.+++++|+++|++++..+.    .                    
T Consensus       192 ~~~v~~Ll~~-g~~~~~~~~~g--~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~----~--------------------  244 (437)
T 1n11_A          192 LDIVKLLLPR-GGSPHSPAWNG--YTPLHIAAKQNQVEVARSLLQYGGSANAESV----Q--------------------  244 (437)
T ss_dssp             HHHHHHHGGG-TCCSCCCCTTC--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----T--------------------
T ss_pred             HHHHHHHHhC-CCCCCCcCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC----C--------------------
Confidence            6666666665 44444444443  4777777777777777777777777643322    3                    


Q ss_pred             CCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCc
Q psy8898         492 PLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVN  571 (1236)
Q Consensus       492 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~  571 (1236)
                                                                          |.||||+|+..|+.+++++|+++|++++
T Consensus       245 ----------------------------------------------------g~t~L~~A~~~g~~~~v~~Ll~~~~~~~  272 (437)
T 1n11_A          245 ----------------------------------------------------GVTPLHLAAQEGHAEMVALLLSKQANGN  272 (437)
T ss_dssp             ----------------------------------------------------CCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred             ----------------------------------------------------CCCHHHHHHHCCCHHHHHHHHhcCCCCC
Confidence                                                                4555666666666667777766666555


Q ss_pred             cCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCC
Q psy8898         572 VADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIG  651 (1236)
Q Consensus       572 ~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  651 (1236)
                      ..+..|.|||                                                                      
T Consensus       273 ~~~~~g~t~L----------------------------------------------------------------------  282 (437)
T 1n11_A          273 LGNKSGLTPL----------------------------------------------------------------------  282 (437)
T ss_dssp             CCCTTCCCHH----------------------------------------------------------------------
T ss_pred             CCCCCCCCHH----------------------------------------------------------------------
Confidence            4443333322                                                                      


Q ss_pred             cccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcC
Q psy8898         652 WCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKG  731 (1236)
Q Consensus       652 ~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~g  731 (1236)
                                               |.|+..|+.+++++|++.+......+..|+||||+|+..   ++.++|++|+++|
T Consensus       283 -------------------------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g  334 (437)
T 1n11_A          283 -------------------------HLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHY---GNIKLVKFLLQHQ  334 (437)
T ss_dssp             -------------------------HHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHS---SCSHHHHHHHHTT
T ss_pred             -------------------------HHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHc---CcHHHHHHHHhcC
Confidence                                     223445666666666666665555556688888888886   7899999999999


Q ss_pred             CCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8898         732 AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN  797 (1236)
Q Consensus       732 adin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~g  797 (1236)
                      +++|.+|..|+||||+|++.|+.++|++|+++|++++.+|.+|+|||++|.+.|+.+++++|....
T Consensus       335 ad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~  400 (437)
T 1n11_A          335 ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT  400 (437)
T ss_dssp             CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999999999999999999997654

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=7.9e-55  Score=520.07  Aligned_cols=290  Identities=32%  Similarity=0.419  Sum_probs=210.4

Q ss_pred             CCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhH
Q psy8898         213 LGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTREL  292 (1236)
Q Consensus       213 ~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~  292 (1236)
                      .|+||||+||..|+.++|++|++.|++++..+..|.||||+|+..|+.++|++|+++|++++.++..|.||         
T Consensus        13 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~---------   83 (437)
T 1n11_A           13 SGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTP---------   83 (437)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCH---------
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCH---------
Confidence            68888888888888888888888888888888888888888888888888888888888777665544443         


Q ss_pred             HHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCC
Q psy8898         293 QQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQ  372 (1236)
Q Consensus       293 ~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (1236)
                                                                                                      
T Consensus        84 --------------------------------------------------------------------------------   83 (437)
T 1n11_A           84 --------------------------------------------------------------------------------   83 (437)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHH
Q psy8898         373 SGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVE  452 (1236)
Q Consensus       373 ~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~  452 (1236)
                                                    |+.|+..|+.+++++|++. +.+++..+..+  .||||+|+..|+.++|+
T Consensus        84 ------------------------------L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g--~t~L~~A~~~g~~~~v~  130 (437)
T 1n11_A           84 ------------------------------LHCAARIGHTNMVKLLLEN-NANPNLATTAG--HTPLHIAAREGHVETVL  130 (437)
T ss_dssp             ------------------------------HHHHHHHTCHHHHHHHHHH-TCCTTCCCTTC--CCHHHHHHHHTCHHHHH
T ss_pred             ------------------------------HHHHHHCCCHHHHHHHHhC-CCCCCCCCCCC--CcHHHHHHHcCCHHHHH
Confidence                                          3333444555555555554 44444444433  36666666666666666


Q ss_pred             HHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCccccccc
Q psy8898         453 YLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTA  532 (1236)
Q Consensus       453 ~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  532 (1236)
                      +|+++|++++..+.                                                                  
T Consensus       131 ~Ll~~~~~~~~~~~------------------------------------------------------------------  144 (437)
T 1n11_A          131 ALLEKEASQACMTK------------------------------------------------------------------  144 (437)
T ss_dssp             HHHHTTCCSCCCCT------------------------------------------------------------------
T ss_pred             HHHhCCCCCcCCCC------------------------------------------------------------------
Confidence            66666655432211                                                                  


Q ss_pred             CCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcc
Q psy8898         533 GRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVP  612 (1236)
Q Consensus       533 ~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~  612 (1236)
                                .|.||||+|+..|+.+++++|+++|++++..+..|.||                                
T Consensus       145 ----------~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~--------------------------------  182 (437)
T 1n11_A          145 ----------KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP--------------------------------  182 (437)
T ss_dssp             ----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCH--------------------------------
T ss_pred             ----------CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCH--------------------------------
Confidence                      16677788888888888888888877766554443333                                


Q ss_pred             cCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhh
Q psy8898         613 CTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFL  692 (1236)
Q Consensus       613 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll  692 (1236)
                                                                                     |+.|+..|+.+++++|+
T Consensus       183 ---------------------------------------------------------------L~~A~~~~~~~~v~~Ll  199 (437)
T 1n11_A          183 ---------------------------------------------------------------LHVAVHHNNLDIVKLLL  199 (437)
T ss_dssp             ---------------------------------------------------------------HHHHHHTTCHHHHHHHG
T ss_pred             ---------------------------------------------------------------HHHHHHcCCHHHHHHHH
Confidence                                                                           33335667777888888


Q ss_pred             ccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCC
Q psy8898         693 TSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDV  772 (1236)
Q Consensus       693 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~  772 (1236)
                      +.+......+..|+||||+|+..   ++.+++++|+++|++++.++..|+||||+|++.|+.++|++|+++|++++..|.
T Consensus       200 ~~g~~~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  276 (437)
T 1n11_A          200 PRGGSPHSPAWNGYTPLHIAAKQ---NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNK  276 (437)
T ss_dssp             GGTCCSCCCCTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT
T ss_pred             hCCCCCCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCC
Confidence            87776666666688888888886   778888888888888888888888888888888888888888888888888888


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8898         773 LGQTALHRTARDDKTQAVRVLLSHNA  798 (1236)
Q Consensus       773 ~G~tpL~~A~~~~~~~iv~~Ll~~ga  798 (1236)
                      .|.||||+|+..|+.+++++|+++|+
T Consensus       277 ~g~t~L~~A~~~~~~~~~~~Ll~~g~  302 (437)
T 1n11_A          277 SGLTPLHLVAQEGHVPVADVLIKHGV  302 (437)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCc
Confidence            88888888888888887777776553

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=1.4e-41  Score=390.00  Aligned_cols=304  Identities=26%  Similarity=0.329  Sum_probs=240.2

Q ss_pred             CCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCC-CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchh
Q psy8898         213 LGLVPLHNACSYGHFEVTEMLIKAGANVNAMDL-WQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE  291 (1236)
Q Consensus       213 ~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  291 (1236)
                      +|.|+||.||++|++++|++||++|+++|.++. .|+||||+|+..|+.++|++|+++|++++..+..+.+++       
T Consensus        24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~-------   96 (337)
T 4g8k_A           24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPF-------   96 (337)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH-------
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchh-------
Confidence            488999999999999999999999999999875 499999999999999999999999999998887666652       


Q ss_pred             HHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCC
Q psy8898         292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNG  371 (1236)
Q Consensus       292 ~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (1236)
                                                                                                      
T Consensus        97 --------------------------------------------------------------------------------   96 (337)
T 4g8k_A           97 --------------------------------------------------------------------------------   96 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHH
Q psy8898         372 QSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVV  451 (1236)
Q Consensus       372 ~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv  451 (1236)
                                                      +.++..+....+..+++. +.+++..+..|  +||||+|+..|+.+++
T Consensus        97 --------------------------------~~~~~~~~~~~~~~~~~~-~~~~~~~d~~g--~t~l~~A~~~~~~~~~  141 (337)
T 4g8k_A           97 --------------------------------ILAAIAGSVKLLKLFLSK-GADVNECDFYG--FTAFMEAAVYGKVKAL  141 (337)
T ss_dssp             --------------------------------HHHHHHTCHHHHHHHHTT-TCCTTCBCTTC--CBHHHHHHHTTCHHHH
T ss_pred             --------------------------------HHHHhcccchhhHHhhhc-cchhhhhccCC--CCHHHHHHHcCcHHHH
Confidence                                            333444556666666665 56677766655  5999999999999999


Q ss_pred             HHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccc
Q psy8898         452 EYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT  531 (1236)
Q Consensus       452 ~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~  531 (1236)
                      ++|+++|++++.....    ...+                                                   ...+.
T Consensus       142 ~~ll~~ga~~~~~~~~----~~~~---------------------------------------------------~~~~~  166 (337)
T 4g8k_A          142 KFLYKRGANVNLRRKT----KEDQ---------------------------------------------------ERLRK  166 (337)
T ss_dssp             HHHHHTTCCTTCCCCC----C--------------------------------------------------------CTT
T ss_pred             HHHHHcCCCcchhhcc----cccc---------------------------------------------------ccccC
Confidence            9999999998654321    1000                                                   00000


Q ss_pred             cCCCCchhhhhccchhHHHHHhcCcHHHHHHHHh-CCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhh
Q psy8898         532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVK-HGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLA  610 (1236)
Q Consensus       532 ~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~-~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a  610 (1236)
                                 .|.||||+|+..|+.++|++|++ .|++++..|..|.||++.++..                       
T Consensus       167 -----------~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~-----------------------  212 (337)
T 4g8k_A          167 -----------GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS-----------------------  212 (337)
T ss_dssp             -----------CSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHH-----------------------
T ss_pred             -----------CCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHH-----------------------
Confidence                       28899999999999999999996 5888888887777777765311                       


Q ss_pred             cccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHH
Q psy8898         611 VPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKK  690 (1236)
Q Consensus       611 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~  690 (1236)
                                                                                          +...+...++++
T Consensus       213 --------------------------------------------------------------------~~~~~~~~i~~l  224 (337)
T 4g8k_A          213 --------------------------------------------------------------------SDDSDVEAITHL  224 (337)
T ss_dssp             --------------------------------------------------------------------SCTTTHHHHHHH
T ss_pred             --------------------------------------------------------------------cCcccHHHHHHH
Confidence                                                                                000011234555


Q ss_pred             hhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHc-CCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccc
Q psy8898         691 FLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRK-GAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNL  769 (1236)
Q Consensus       691 Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~-gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~  769 (1236)
                      |++.+......+..|+||||+|+..   ++.+++++|++. |+++|.+|..|+||||+|++.|+.++|++|+++||++|.
T Consensus       225 Ll~~gad~n~~d~~g~t~L~~a~~~---~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~  301 (337)
T 4g8k_A          225 LLDHGADVNVRGERGKTPLILAVEK---KHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC  301 (337)
T ss_dssp             HHHTTCCTTCCCGGGCCHHHHHHHT---TCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred             HHHCCCCCCCcCCCCCCHHHHHHHh---hhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence            5666555555555577888888876   789999999986 899999999999999999999999999999999999976


Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcc
Q psy8898         770 VDVLGQTALHRTARDDKTQAVRVLLSHNADTSIV  803 (1236)
Q Consensus       770 ~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  803 (1236)
                      +     ||||+|+.+|+.++|++||++||+++..
T Consensus       302 ~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~  330 (337)
T 4g8k_A          302 G-----DLVMTARRNYDHSLVKVLLSHGAKEDFH  330 (337)
T ss_dssp             C-----CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred             C-----CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence            4     5999999999999999999999999875

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=6.9e-41  Score=384.19  Aligned_cols=305  Identities=30%  Similarity=0.356  Sum_probs=241.3

Q ss_pred             CCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCC
Q psy8898          22 DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNW-NFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPM  100 (1236)
Q Consensus        22 ~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~-g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~  100 (1236)
                      .+|.||||.||++|+.++|++||++|+++|.+|.. |+||||+|+..|+.++|++                         
T Consensus        23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~-------------------------   77 (337)
T 4g8k_A           23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVEL-------------------------   77 (337)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHH-------------------------
T ss_pred             CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHH-------------------------
Confidence            35789999999999999999999999999998765 9999999999999999988                         


Q ss_pred             CcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccC
Q psy8898         101 HKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS  180 (1236)
Q Consensus       101 ~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (1236)
                            |+++|++++.++..+                                                           
T Consensus        78 ------Ll~~ga~~~~~~~~~-----------------------------------------------------------   92 (337)
T 4g8k_A           78 ------LLRHGADPVLRKKNG-----------------------------------------------------------   92 (337)
T ss_dssp             ------HHHTTCCTTCCCTTC-----------------------------------------------------------
T ss_pred             ------HHHcCCchhhhccCC-----------------------------------------------------------
Confidence                  999999998766544                                                           


Q ss_pred             CCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q psy8898         181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRL  260 (1236)
Q Consensus       181 ~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~  260 (1236)
                                                        .++++.++..+...++..+++.+++++..|..|+||||+|+..|+.
T Consensus        93 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~  138 (337)
T 4g8k_A           93 ----------------------------------ATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV  138 (337)
T ss_dssp             ----------------------------------CCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred             ----------------------------------CchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH
Confidence                                              4567777777888999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCch
Q psy8898         261 EVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPG  340 (1236)
Q Consensus       261 ~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~  340 (1236)
                      +++++|+++|++++..+....                                                           
T Consensus       139 ~~~~~ll~~ga~~~~~~~~~~-----------------------------------------------------------  159 (337)
T 4g8k_A          139 KALKFLYKRGANVNLRRKTKE-----------------------------------------------------------  159 (337)
T ss_dssp             HHHHHHHHTTCCTTCCCCCC------------------------------------------------------------
T ss_pred             HHHHHHHHcCCCcchhhcccc-----------------------------------------------------------
Confidence            999999999999876542110                                                           


Q ss_pred             hHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHh
Q psy8898         341 TLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLS  420 (1236)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~  420 (1236)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (337)
T 4g8k_A          160 --------------------------------------------------------------------------------  159 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHh-cCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCC
Q psy8898         421 SCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLA-HGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAAN  499 (1236)
Q Consensus       421 ~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~-~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~  499 (1236)
                          .....+.  .|.||||+|+..|+.++|++|++ .|++++..    |..|.|++++++..+.               
T Consensus       160 ----~~~~~~~--~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~----d~~g~t~l~~~~~~~~---------------  214 (337)
T 4g8k_A          160 ----DQERLRK--GGATALMDAAEKGHVEVLKILLDEMGADVNAC----DNMGRNALIHALLSSD---------------  214 (337)
T ss_dssp             --------CTT--CSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCC----CTTSCCHHHHHHHHSC---------------
T ss_pred             ----ccccccC--CCCcHHHHHHHCCCHHHHHHHHhccCCCcCcc----CCCCCcHHHHHHHHcC---------------
Confidence                0111122  34599999999999999999996 58998544    4477777776654321               


Q ss_pred             CchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCC
Q psy8898         500 DPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFT  579 (1236)
Q Consensus       500 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~t  579 (1236)
                                                                           ..+..+++++|+++|+++|.+|..|+|
T Consensus       215 -----------------------------------------------------~~~~~~i~~lLl~~gad~n~~d~~g~t  241 (337)
T 4g8k_A          215 -----------------------------------------------------DSDVEAITHLLLDHGADVNVRGERGKT  241 (337)
T ss_dssp             -----------------------------------------------------TTTHHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred             -----------------------------------------------------cccHHHHHHHHHHCCCCCCCcCCCCCC
Confidence                                                                 112345777788877777655544433


Q ss_pred             HHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccc
Q psy8898         580 PLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKM  659 (1236)
Q Consensus       580 pL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  659 (1236)
                      ||                                                                              
T Consensus       242 ~L------------------------------------------------------------------------------  243 (337)
T 4g8k_A          242 PL------------------------------------------------------------------------------  243 (337)
T ss_dssp             HH------------------------------------------------------------------------------
T ss_pred             HH------------------------------------------------------------------------------
Confidence            33                                                                              


Q ss_pred             cccccccchhhccccHHHHHHHcCCHHHHHHhhcc-CCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCC
Q psy8898         660 ELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTS-DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN  738 (1236)
Q Consensus       660 ~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d  738 (1236)
                                       |.|+..|+.++++.|++. +......+..|+||||+|+..   |+.++|++|+++|+|+|.+ 
T Consensus       244 -----------------~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~---g~~~iv~~Ll~~GAd~n~~-  302 (337)
T 4g8k_A          244 -----------------ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL---KLKKIAELLCKRGASTDCG-  302 (337)
T ss_dssp             -----------------HHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHT---TCHHHHHHHHTTSCSSTTC-
T ss_pred             -----------------HHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCC-
Confidence                             334566777788888775 445555566689999999987   8999999999999999765 


Q ss_pred             CCCchHHHHHHHhCCHHHHHHHHHCCCCcccc
Q psy8898         739 KELLAPIHLAADLGHLDVLDTLLRLGAKVNLV  770 (1236)
Q Consensus       739 ~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~  770 (1236)
                          ||||+|++.|+.++|++||++||++|..
T Consensus       303 ----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~  330 (337)
T 4g8k_A          303 ----DLVMTARRNYDHSLVKVLLSHGAKEDFH  330 (337)
T ss_dssp             ----CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred             ----CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence                5999999999999999999999999864

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=7.8e-38  Score=361.81  Aligned_cols=308  Identities=30%  Similarity=0.330  Sum_probs=249.0

Q ss_pred             CCchHHHHHHhcCcHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchh
Q psy8898         213 LGLVPLHNACSYGHFEVTEMLIKA-GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE  291 (1236)
Q Consensus       213 ~g~T~L~~Aa~~g~~~iv~~Ll~~-ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  291 (1236)
                      .|.|+||.||..|+.+.|+.|+.. +++++..|..|+||||+|+..|+.++|++|+++|++++.++..|.||        
T Consensus        23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~--------   94 (351)
T 3utm_A           23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVP--------   94 (351)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH--------
T ss_pred             ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcH--------
Confidence            588999999999999999988865 89999999999999999999999999999999999999888776666        


Q ss_pred             HHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCC
Q psy8898         292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNG  371 (1236)
Q Consensus       292 ~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (1236)
                                                                                                      
T Consensus        95 --------------------------------------------------------------------------------   94 (351)
T 3utm_A           95 --------------------------------------------------------------------------------   94 (351)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHH
Q psy8898         372 QSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVV  451 (1236)
Q Consensus       372 ~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv  451 (1236)
                                                     ||.|+..|+.+++++|++. +.+++..+..+  +||||+|+..|+.+++
T Consensus        95 -------------------------------L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~g--~t~L~~A~~~~~~~~v  140 (351)
T 3utm_A           95 -------------------------------LHNACSYGHYEVTELLLKH-GACVNAMDLWQ--FTPLHEAASKNRVEVC  140 (351)
T ss_dssp             -------------------------------HHHHHHTTCHHHHHHHHHT-TCCTTCCCTTC--CCHHHHHHHTTCHHHH
T ss_pred             -------------------------------HHHHHHCCCHHHHHHHHHC-CCCCCCCCCCC--CCHHHHHHHcCCHHHH
Confidence                                           4556667778888888877 67777776655  5999999999999999


Q ss_pred             HHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccc
Q psy8898         452 EYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT  531 (1236)
Q Consensus       452 ~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~  531 (1236)
                      ++|+++|++++    ..+..|.||+++|+..+..+.+.+..        ...++..++..++.+.++.++.....+....
T Consensus       141 ~~Ll~~g~~~~----~~~~~g~~~l~~a~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  208 (351)
T 3utm_A          141 SLLLSHGADPT----LVNCHGKSAVDMAPTPELRERLTYEF--------KGHSLLQAAREADLAKVKKTLALEIINFKQP  208 (351)
T ss_dssp             HHHHHTTCCTT----CCCTTSCCHHHHCSSHHHHHHHHHHH--------HHHHHHHHHHTTCHHHHHHHTTTCCTTCCCT
T ss_pred             HHHHHcCCCCc----cccCCCCcchHHHhhhhhHHHHHhhh--------cccHHHHHHHhccHHHHHHHHHhhcccccCC
Confidence            99999999995    45569999999999888888777653        2355667777777777777776654333222


Q ss_pred             cCCCCchhhhhccchhHHHHHhc---CcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhh
Q psy8898         532 AGRKSTPLHFAAGLVPLHNACSY---GHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALD  608 (1236)
Q Consensus       532 ~~~~~t~l~~~~g~t~L~~A~~~---g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~  608 (1236)
                      .          .|.||||+|+..   +..+++++|+++|++++.+|.                                 
T Consensus       209 ~----------~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~---------------------------------  245 (351)
T 3utm_A          209 Q----------SHETALHCAVASLHPKRKQVAELLLRKGANVNEKNK---------------------------------  245 (351)
T ss_dssp             T----------TCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCT---------------------------------
T ss_pred             C----------CCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCC---------------------------------
Confidence            1          266777777776   446677777766665544332                                 


Q ss_pred             hhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHH
Q psy8898         609 LAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRV  688 (1236)
Q Consensus       609 ~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v  688 (1236)
                                                                                                      
T Consensus       246 --------------------------------------------------------------------------------  245 (351)
T 3utm_A          246 --------------------------------------------------------------------------------  245 (351)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCcc
Q psy8898         689 KKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVN  768 (1236)
Q Consensus       689 ~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n  768 (1236)
                                     .|+||||+|+..   ++.+++++|+++|+++|.+|..|+||||+|++.|+.++|++|+++|++++
T Consensus       246 ---------------~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~  307 (351)
T 3utm_A          246 ---------------DFMTPLHVAAER---AHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS  307 (351)
T ss_dssp             ---------------TCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred             ---------------CCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence                           355666666665   78899999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8898         769 LVDVLGQTALHRTARDDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       769 ~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~  799 (1236)
                      .+|..|+||+++|    +.+++++|.+.+..
T Consensus       308 ~~~~~g~tal~~a----~~~~~~~l~~~~~~  334 (351)
T 3utm_A          308 IISLQGFTAAQMG----NEAVQQILSESTPM  334 (351)
T ss_dssp             CCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred             CcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence            9999999999998    77889999888753

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=5.7e-39  Score=371.36  Aligned_cols=332  Identities=44%  Similarity=0.636  Sum_probs=236.9

Q ss_pred             HHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccc
Q psy8898           9 YLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEA-DANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQ   87 (1236)
Q Consensus         9 ~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~   87 (1236)
                      .|++.+++.+..+..|.|+||.||..|+.+.|+.|+.. +++++..|..|.||||+|+..|+.++|++            
T Consensus         9 ~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~------------   76 (351)
T 3utm_A            9 DLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQL------------   76 (351)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHH------------
T ss_pred             hccCCceeeeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHH------------
Confidence            45556677777888999999999999999999888875 88999999999999999999999999988            


Q ss_pred             cccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCccccccc
Q psy8898          88 YVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSC  167 (1236)
Q Consensus        88 ~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (1236)
                                         |+++|++++.++..                                               
T Consensus        77 -------------------Ll~~g~~~~~~~~~-----------------------------------------------   90 (351)
T 3utm_A           77 -------------------LLQHGADVHAKDKG-----------------------------------------------   90 (351)
T ss_dssp             -------------------HHHTTCCTTCCCTT-----------------------------------------------
T ss_pred             -------------------HHHcCCCCCccCCC-----------------------------------------------
Confidence                               99999998876554                                               


Q ss_pred             CCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCC
Q psy8898         168 GDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQ  247 (1236)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g  247 (1236)
                                                                    |+||||+||..|+.+++++|+++|++++..|.+|
T Consensus        91 ----------------------------------------------g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g  124 (351)
T 3utm_A           91 ----------------------------------------------GLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQ  124 (351)
T ss_dssp             ----------------------------------------------CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred             ----------------------------------------------CCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
Confidence                                                          5567888888899999999999999999999999


Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhccccc
Q psy8898         248 FTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVN  327 (1236)
Q Consensus       248 ~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~  327 (1236)
                      +||||+|+..|+.+++++|+++|++++..+..|.||++++...+....+...+...++..++..++.+.++.++......
T Consensus       125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  204 (351)
T 3utm_A          125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN  204 (351)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccc
Confidence            99999999999999999999999999999999999999998887777766666666666666666666666655443222


Q ss_pred             CCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHH
Q psy8898         328 FKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEAS  407 (1236)
Q Consensus       328 ~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~  407 (1236)
                      ..                                                                              
T Consensus       205 ~~------------------------------------------------------------------------------  206 (351)
T 3utm_A          205 FK------------------------------------------------------------------------------  206 (351)
T ss_dssp             CC------------------------------------------------------------------------------
T ss_pred             cc------------------------------------------------------------------------------
Confidence            11                                                                              


Q ss_pred             hCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhc---CCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCc
Q psy8898         408 KGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGY---NRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGR  484 (1236)
Q Consensus       408 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~  484 (1236)
                                           .+  ..|.||||+|+..   +..+++++|+++|++++    .+|..|+||||+|+..|+
T Consensus       207 ---------------------~~--~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~g~  259 (351)
T 3utm_A          207 ---------------------QP--QSHETALHCAVASLHPKRKQVAELLLRKGANVN----EKNKDFMTPLHVAAERAH  259 (351)
T ss_dssp             ---------------------CT--TTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHTTC
T ss_pred             ---------------------CC--CCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcC----CcCCCCCCHHHHHHHcCC
Confidence                                 11  1223555555555   33455555555555552    223345555555555544


Q ss_pred             hHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHH
Q psy8898         485 TQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLV  564 (1236)
Q Consensus       485 ~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll  564 (1236)
                      .+++++|++.+...                            +..+.           .|+||||+|+..|+.+++++|+
T Consensus       260 ~~~v~~Ll~~ga~~----------------------------n~~d~-----------~g~t~L~~A~~~~~~~~v~~Ll  300 (351)
T 3utm_A          260 NDVMEVLHKHGAKM----------------------------NALDS-----------LGQTALHRAALAGHLQTCRLLL  300 (351)
T ss_dssp             HHHHHHHHHTTCCT----------------------------TCCCT-----------TSCCHHHHHHHHTCHHHHHHHH
T ss_pred             HHHHHHHHHCCCCC----------------------------CCcCC-----------CCCCHHHHHHHcCcHHHHHHHH
Confidence            44444443322211                            11111           2778888899999999999999


Q ss_pred             hCCCCCccCCCCCCCHHHHHH---HHHHHhcCCCCcccCCCCCChhhhhc
Q psy8898         565 KHGANVNVADLWKFTPLHEAA---AKALLQHGADINLKNTDGKTALDLAV  611 (1236)
Q Consensus       565 ~~g~~v~~~d~~g~tpL~~a~---~~~Ll~~g~d~~~~~~~g~t~L~~a~  611 (1236)
                      ++|++++..|..|.||+++|.   .++|.+.+.   ....++.+++..|+
T Consensus       301 ~~gad~~~~~~~g~tal~~a~~~~~~~l~~~~~---~~~~~~~~~l~~A~  347 (351)
T 3utm_A          301 SYGSDPSIISLQGFTAAQMGNEAVQQILSESTP---MRTSDVDYRLLEAS  347 (351)
T ss_dssp             HTTCCTTCCCTTSCCHHHHSCHHHHHHHHHC-------------------
T ss_pred             HcCCCCCCcCCCCCChhhhhhHHHHHHHHhccc---cccCcceeehhhhh
Confidence            999999999999999999974   456666543   33456778888775

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=1.5e-37  Score=347.67  Aligned_cols=276  Identities=29%  Similarity=0.361  Sum_probs=224.3

Q ss_pred             CCchHHHHHHhcCcHHHHHHHHhcCCCCCCC-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchh
Q psy8898         213 LGLVPLHNACSYGHFEVTEMLIKAGANVNAM-DLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRE  291 (1236)
Q Consensus       213 ~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~  291 (1236)
                      +|.||||.|+..|+.++|++|++.|++++.. +..|+||||+|+..|+.+++++|+++|++++..+..|.||        
T Consensus         4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~--------   75 (285)
T 1wdy_A            4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATP--------   75 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH--------
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCH--------
Confidence            3789999999999999999999999999988 8889999999999999999999999999998877666655        


Q ss_pred             HHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCC
Q psy8898         292 LQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNG  371 (1236)
Q Consensus       292 ~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (1236)
                                                                                                      
T Consensus        76 --------------------------------------------------------------------------------   75 (285)
T 1wdy_A           76 --------------------------------------------------------------------------------   75 (285)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHH
Q psy8898         372 QSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVV  451 (1236)
Q Consensus       372 ~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv  451 (1236)
                                                     |+.|+..|+.+++++|++. +.+++..+..+  +||||+|+..|+.+++
T Consensus        76 -------------------------------L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g--~t~L~~A~~~~~~~~~  121 (285)
T 1wdy_A           76 -------------------------------FLLAAIAGSVKLLKLFLSK-GADVNECDFYG--FTAFMEAAVYGKVKAL  121 (285)
T ss_dssp             -------------------------------HHHHHHHTCHHHHHHHHHT-TCCTTCBCTTC--CBHHHHHHHTTCHHHH
T ss_pred             -------------------------------HHHHHHcCCHHHHHHHHHc-CCCCCccCccc--CCHHHHHHHhCCHHHH
Confidence                                           4445566677777777776 56666666555  5999999999999999


Q ss_pred             HHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccc
Q psy8898         452 EYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDT  531 (1236)
Q Consensus       452 ~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~  531 (1236)
                      ++|+++|++++......       -.                                       ..         ..+.
T Consensus       122 ~~Ll~~g~~~~~~~~~~-------~~---------------------------------------~~---------~~~~  146 (285)
T 1wdy_A          122 KFLYKRGANVNLRRKTK-------ED---------------------------------------QE---------RLRK  146 (285)
T ss_dssp             HHHHHTTCCTTCCCCCC-------HH---------------------------------------HH---------HTTC
T ss_pred             HHHHHhCCCcccccccH-------HH---------------------------------------HH---------hhcc
Confidence            99999998885543210       00                                       00         0000


Q ss_pred             cCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhC-CCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhh
Q psy8898         532 AGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKH-GANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLA  610 (1236)
Q Consensus       532 ~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a  610 (1236)
                                 .|.||||+|+..|+.+++++|+++ |++++..|..|.||||+                           
T Consensus       147 -----------~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~---------------------------  188 (285)
T 1wdy_A          147 -----------GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH---------------------------  188 (285)
T ss_dssp             -----------CCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH---------------------------
T ss_pred             -----------CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHH---------------------------
Confidence                       277899999999999999999987 77766555443333333                           


Q ss_pred             cccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHH
Q psy8898         611 VPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKK  690 (1236)
Q Consensus       611 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~  690 (1236)
                                                                                                      
T Consensus       189 --------------------------------------------------------------------------------  188 (285)
T 1wdy_A          189 --------------------------------------------------------------------------------  188 (285)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhccCCcccCCCCCCChHHHHHhhCCC-CChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHH-CCCCcc
Q psy8898         691 FLTSDVVNFKHPYTGDTPLHCAVTSPY-PKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLR-LGAKVN  768 (1236)
Q Consensus       691 Ll~~~~~~~~~~~~g~t~L~~A~~~~~-~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~-~ga~~n  768 (1236)
                                           |+..+. ....+++++|+++|++++.+|..|+||||+|++.|+.++|++|++ .|++++
T Consensus       189 ---------------------a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~  247 (285)
T 1wdy_A          189 ---------------------ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN  247 (285)
T ss_dssp             ---------------------HHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT
T ss_pred             ---------------------HHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcc
Confidence                                 222200 023789999999999999999999999999999999999999999 899999


Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q psy8898         769 LVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVS  804 (1236)
Q Consensus       769 ~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~  804 (1236)
                      .+|..|+||||+|++.|+.+++++|+++||+++..+
T Consensus       248 ~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d  283 (285)
T 1wdy_A          248 DTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             ccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence            999999999999999999999999999999998875

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=4.5e-36  Score=335.73  Aligned_cols=263  Identities=29%  Similarity=0.337  Sum_probs=228.9

Q ss_pred             CCcHHHHHHHHHcCCCcccc-CCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeecc
Q psy8898           1 YGRKDVVEYLLASGASIHAR-DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFA   79 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~ga~~n~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~   79 (1236)
                      +|+.++|++|+++|++++.+ +..|+||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++    
T Consensus        15 ~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~----   90 (285)
T 1wdy_A           15 NEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKL----   90 (285)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHH----
T ss_pred             cCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHH----
Confidence            58999999999999999988 7899999999999999999999999999999999999999999999999999988    


Q ss_pred             ccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy8898          80 EHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPP  159 (1236)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~  159 (1236)
                                                 |+++|++++..+..|.||||+|+..|+.++++.|++..........       
T Consensus        91 ---------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-------  136 (285)
T 1wdy_A           91 ---------------------------FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK-------  136 (285)
T ss_dssp             ---------------------------HHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCC-------
T ss_pred             ---------------------------HHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccc-------
Confidence                                       9999999999999999999999999999999999986422111000       


Q ss_pred             CcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhc-CC
Q psy8898         160 SQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKA-GA  238 (1236)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~-ga  238 (1236)
                                                        .+..   .      ......|.||||+|+..|+.+++++|++. |+
T Consensus       137 ----------------------------------~~~~---~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~  173 (285)
T 1wdy_A          137 ----------------------------------TKED---Q------ERLRKGGATALMDAAEKGHVEVLKILLDEMGA  173 (285)
T ss_dssp             ----------------------------------CCHH---H------HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCC
T ss_pred             ----------------------------------cHHH---H------HhhccCCCcHHHHHHHcCCHHHHHHHHHhcCC
Confidence                                              0000   0      00012588999999999999999999987 99


Q ss_pred             CCCCCCCCCCcHHHHHHHcCc----HHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCCh
Q psy8898         239 NVNAMDLWQFTPLHEAASKSR----LEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDP  314 (1236)
Q Consensus       239 ~~n~~d~~g~TpL~~A~~~g~----~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~  314 (1236)
                      +++..|..|+||||+|+..++    .+++++|+++|++++.++..|.||                               
T Consensus       174 ~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~-------------------------------  222 (285)
T 1wdy_A          174 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP-------------------------------  222 (285)
T ss_dssp             CTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCH-------------------------------
T ss_pred             CCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcH-------------------------------
Confidence            999999999999999999999    999999999999999888766665                               


Q ss_pred             HHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCC
Q psy8898         315 SRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPP  394 (1236)
Q Consensus       315 ~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~  394 (1236)
                                                                                                      
T Consensus       223 --------------------------------------------------------------------------------  222 (285)
T 1wdy_A          223 --------------------------------------------------------------------------------  222 (285)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCC
Q psy8898         395 SVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD  465 (1236)
Q Consensus       395 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~  465 (1236)
                              ||.|+..|+.+++++|++..+.+++..+..|  +||||+|+..|+.+++++|+++|++++.++
T Consensus       223 --------L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g--~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d  283 (285)
T 1wdy_A          223 --------LILAVEKKHLGLVQRLLEQEHIEINDTDSDG--KTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             --------HHHHHHTTCHHHHHHHHHSSSCCTTCCCTTS--CCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             --------HHHHHHcCCHHHHHHHHhccCCCccccCCCC--CcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence                    4556677888888888886688888877766  599999999999999999999999997654

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.4e-35  Score=330.21  Aligned_cols=91  Identities=21%  Similarity=0.333  Sum_probs=77.6

Q ss_pred             CChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHc
Q psy8898         705 GDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARD  784 (1236)
Q Consensus       705 g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~  784 (1236)
                      |+||||+|+..   ++.+++++|+++|++++. |..|+||||+|++.|+.++|++|+++|++++.+|.+|+||||+|+  
T Consensus       190 g~t~L~~A~~~---~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--  263 (285)
T 3d9h_A          190 LGTPLYLACEN---QQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--  263 (285)
T ss_dssp             TBCHHHHHHHT---TCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--
T ss_pred             CCCHHHHHHHc---CcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--
Confidence            55666666665   789999999999999995 889999999999999999999999999999999999999999999  


Q ss_pred             CCHHHHHHHHhC-CCCCC
Q psy8898         785 DKTQAVRVLLSH-NADTS  801 (1236)
Q Consensus       785 ~~~~iv~~Ll~~-ga~~~  801 (1236)
                      ++.+++++|+++ |++..
T Consensus       264 ~~~~~~~~Ll~~~~a~l~  281 (285)
T 3d9h_A          264 PESPLAQLFLEREGASLP  281 (285)
T ss_dssp             TTSHHHHHHHHHC-----
T ss_pred             CccHHHHHHHHhhccCCC
Confidence            457899999998 76654

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=1.1e-35  Score=344.70  Aligned_cols=302  Identities=20%  Similarity=0.208  Sum_probs=190.9

Q ss_pred             hhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHH
Q psy8898         399 LESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHE  478 (1236)
Q Consensus       399 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~  478 (1236)
                      .+.+|..++..|+.+.++.+++.. ..+...      .+++.-+...|+++++++++....         |..|.||||+
T Consensus        37 ~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~---------~~~g~t~L~~  100 (373)
T 2fo1_E           37 SQHSLLEASYDGYIKRQRNELQHY-SLYPNP------QGYGNGNDFLGDFNHTNLQIPTEP---------EPESPIKLHT  100 (373)
T ss_dssp             -------------------------------------------------------------------------CCCHHHH
T ss_pred             cccccccccCCccccchhhhhhhh-ccccCc------cccCCCCCccccccccccccccCC---------CCCCccHHHH
Confidence            344566777777777777777652 222111      145556667777888877766432         3367888888


Q ss_pred             HHhcCchHHHhhcCCCCCC--C-CCchhHHHHHHhcCChHHHHHHh--------CC-CCcccccccCCCCchhhhhccch
Q psy8898         479 AAQKGRTQLSALLPLSPSA--A-NDPLRELFEACKGGDLTKVKKLV--------NP-QTVNARDTAGRKSTPLHFAAGLV  546 (1236)
Q Consensus       479 A~~~~~~~iv~~L~~~~~~--~-~~~~~~L~~A~~~g~~~~v~~Ll--------~~-~~~~~~~~~~~~~t~l~~~~g~t  546 (1236)
                      |+..+ .+++++|......  + ..+.||||.|+..|+.+++++|+        +. .+++..+..           |+|
T Consensus       101 Aa~~~-~~~~~~L~~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~-----------g~T  168 (373)
T 2fo1_E          101 EAAGS-YAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCD-----------ENT  168 (373)
T ss_dssp             HHHSS-SCCCSCCSTTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTT-----------SCC
T ss_pred             HhcCC-chHHHHhccccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCC-----------CCC
Confidence            88744 4677777543322  2 45678888888888877777765        22 233333332           778


Q ss_pred             hHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHH-------HHHHHhcC---CCCcccCCCCCChhhhhcccCcc
Q psy8898         547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHG---ADINLKNTDGKTALDLAVPCTRA  616 (1236)
Q Consensus       547 ~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~-------~~~Ll~~g---~d~~~~~~~g~t~L~~a~~~~~~  616 (1236)
                      |||+|+..|+.++|++|+++|++++..|..|.||||+|+       +++|++++   ++++..|..|.||||+|      
T Consensus       169 pL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A------  242 (373)
T 2fo1_E          169 PLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV------  242 (373)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHH------
T ss_pred             HHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHH------
Confidence            888888888888888888888888887777777777776       45666665   56666666665555555      


Q ss_pred             cccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcC---CHHHHHHhhc
Q psy8898         617 VLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQG---DPSRVKKFLT  693 (1236)
Q Consensus       617 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g---~~~~v~~Ll~  693 (1236)
                                                                                     +..+   +.+++++|++
T Consensus       243 ---------------------------------------------------------------~~~~~~~~~~~v~~Ll~  259 (373)
T 2fo1_E          243 ---------------------------------------------------------------AHNEGRDQVASAKLLVE  259 (373)
T ss_dssp             ---------------------------------------------------------------HHSCSTTHHHHHHHHHH
T ss_pred             ---------------------------------------------------------------HHhCCcchHHHHHHHHH
Confidence                                                                           5555   7788889988


Q ss_pred             cCCcccC--------CCCCCChHHHHHhhCCCCChHHHHHHHHHcC-CCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCC
Q psy8898         694 SDVVNFK--------HPYTGDTPLHCAVTSPYPKRKAIVESLIRKG-AHLNEKNKELLAPIHLAADLGHLDVLDTLLRLG  764 (1236)
Q Consensus       694 ~~~~~~~--------~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~g-adin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~g  764 (1236)
                      .+.....        .+..|+||||+|+..   ++.++|++|+++| +++|.+|..|+||||+|+..|+.++|++|+++|
T Consensus       260 ~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g  336 (373)
T 2fo1_E          260 KGAKVDYDGAARKDSEKYKGRTALHYAAQV---SNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG  336 (373)
T ss_dssp             HTCCSSCCSGGGTSSSSCCCCCTHHHHHSS---CCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred             CCCCcccccccccCcccccCCCHHHHHHHh---CCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            8765443        345699999999997   8999999999885 999999999999999999999999999999999


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy8898         765 AKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADT  800 (1236)
Q Consensus       765 a~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~  800 (1236)
                      ++++.+|..|+|||++|+.+|+.+++++|+++|++.
T Consensus       337 ad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~  372 (373)
T 2fo1_E          337 ASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER  372 (373)
T ss_dssp             CCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred             CCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence            999999999999999999999999999999999863

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=1.1e-35  Score=344.82  Aligned_cols=287  Identities=21%  Similarity=0.234  Sum_probs=222.8

Q ss_pred             CcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898           2 GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD-NWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d-~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      |+++++++++..     .+|..|+||||+|+..++ ++|++|+.  +++|..| ..|+||||+|+..|+.+++++|+.. 
T Consensus        77 g~~~~~~~~~~~-----~~~~~g~t~L~~Aa~~~~-~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~-  147 (373)
T 2fo1_E           77 GDFNHTNLQIPT-----EPEPESPIKLHTEAAGSY-AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVH-  147 (373)
T ss_dssp             ----------------------CCCHHHHHHHSSS-CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHH-
T ss_pred             cccccccccccc-----CCCCCCccHHHHHhcCCc-hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHH-
Confidence            444555554332     457899999999999665 88888864  5889998 7899999999999999999884311 


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPS  160 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~  160 (1236)
                                            .++.|+++|++++.+|..|.||||+|+..|+.++|+.|++......            
T Consensus       148 ----------------------~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~------------  193 (373)
T 2fo1_E          148 ----------------------EAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPT------------  193 (373)
T ss_dssp             ----------------------HHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC------------
T ss_pred             ----------------------HHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCc------------
Confidence                                  1233569999999999999999999999999999998887531100            


Q ss_pred             cccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcC---
Q psy8898         161 QYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAG---  237 (1236)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~g---  237 (1236)
                                                                      .....|.||||+|+..|+.+++++|++.|   
T Consensus       194 ------------------------------------------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~  225 (373)
T 2fo1_E          194 ------------------------------------------------IYNKSERSALHQAAANRDFGMMVYMLNSTKLK  225 (373)
T ss_dssp             ------------------------------------------------CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH
T ss_pred             ------------------------------------------------ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccc
Confidence                                                            01114889999999999999999999998   


Q ss_pred             CCCCCCCCCCCcHHHHHHHcC---cHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCCh
Q psy8898         238 ANVNAMDLWQFTPLHEAASKS---RLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDP  314 (1236)
Q Consensus       238 a~~n~~d~~g~TpL~~A~~~g---~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~  314 (1236)
                      ++++..|..|+||||+|+..+   +.+++++|+++|++++..+....                                 
T Consensus       226 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~---------------------------------  272 (373)
T 2fo1_E          226 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK---------------------------------  272 (373)
T ss_dssp             HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGT---------------------------------
T ss_pred             cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccccc---------------------------------
Confidence            899999999999999999998   89999999999999876431000                                 


Q ss_pred             HHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCC
Q psy8898         315 SRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPP  394 (1236)
Q Consensus       315 ~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~  394 (1236)
                                                                                                    ..
T Consensus       273 ------------------------------------------------------------------------------~~  274 (373)
T 2fo1_E          273 ------------------------------------------------------------------------------DS  274 (373)
T ss_dssp             ------------------------------------------------------------------------------SS
T ss_pred             ------------------------------------------------------------------------------Cc
Confidence                                                                                          00


Q ss_pred             CcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCC
Q psy8898         395 SVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFT  474 (1236)
Q Consensus       395 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t  474 (1236)
                      ....+.|+||.|+..|+.++|++|++..+.+++..+.+|.  ||||+|+..|+.++|++|+++|++++    .+|..|+|
T Consensus       275 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~--TpL~~A~~~g~~~iv~~Ll~~gad~~----~~d~~g~t  348 (373)
T 2fo1_E          275 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGK--TPIMLAAQEGRIEVVMYLIQQGASVE----AVDATDHT  348 (373)
T ss_dssp             SSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCC--CHHHHHHHHTCHHHHHHHHHTTCCSS----CCCSSSCC
T ss_pred             ccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCC--CHHHHHHHcCCHHHHHHHHHcCCCcc----CCCCCCCC
Confidence            0112334567788899999999999987788888887664  99999999999999999999999995    45569999


Q ss_pred             hHHHHHhcCchHHHhhcCCCCC
Q psy8898         475 PLHEAAQKGRTQLSALLPLSPS  496 (1236)
Q Consensus       475 ~L~~A~~~~~~~iv~~L~~~~~  496 (1236)
                      ||++|+.+|+.+++++|++.+.
T Consensus       349 ~l~~A~~~g~~~iv~~Ll~~~a  370 (373)
T 2fo1_E          349 ARQLAQANNHHNIVDIFDRCRP  370 (373)
T ss_dssp             HHHHHHHTTCHHHHHHHHTTC-
T ss_pred             HHHHHHHcCCHHHHHHHHhcCc
Confidence            9999999999999999987654

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=5.9e-36  Score=347.21  Aligned_cols=180  Identities=24%  Similarity=0.282  Sum_probs=136.0

Q ss_pred             CCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccC
Q psy8898          14 GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIG   93 (1236)
Q Consensus        14 ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~   93 (1236)
                      +.+++..|.+|+||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.++|++                  
T Consensus        10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~------------------   71 (364)
T 3ljn_A           10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKY------------------   71 (364)
T ss_dssp             ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHH------------------
T ss_pred             CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHH------------------
Confidence            56788899999999999999999999999999999999999999999999999999999988                  


Q ss_pred             CCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCC
Q psy8898          94 GGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSL  173 (1236)
Q Consensus        94 ~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (1236)
                                   |+++|++++.  .+|.||||+|+..|+.++++.|++.....                          
T Consensus        72 -------------Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--------------------------  110 (364)
T 3ljn_A           72 -------------LASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKER--------------------------  110 (364)
T ss_dssp             -------------HHHHCCCCCC--BTTBCHHHHHHHTTCHHHHHHHHHHHHHH--------------------------
T ss_pred             -------------HHHCCCCccc--cCCCCHHHHHHHcCCHHHHHHHHHhcccc--------------------------
Confidence                         9999996653  57888888888888888888888651000                          


Q ss_pred             CCCCccCCCCCCcccCCCCCCChhhhHHHhcCcC---Cc----cccCCchHHHHHHhcC--cHHHHHHHHhcCCCCCCCC
Q psy8898         174 PPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPS---GQ----AVALGLVPLHNACSYG--HFEVTEMLIKAGANVNAMD  244 (1236)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~---g~----~~~~g~T~L~~Aa~~g--~~~iv~~Ll~~ga~~n~~d  244 (1236)
                               +.         .+  ..........   ..    ....|.||||+|+..|  +.++|++|+++|++++..|
T Consensus       111 ---------~~---------~~--~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d  170 (364)
T 3ljn_A          111 ---------GQ---------MP--ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD  170 (364)
T ss_dssp             ---------TC---------CH--HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC
T ss_pred             ---------CC---------CH--HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC
Confidence                     00         00  0000000000   01    1126888888888888  8888888888888888888


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy8898         245 LWQFTPLHEAASKSRLEVCSLLLSEGAD  272 (1236)
Q Consensus       245 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~  272 (1236)
                      ..|+||||+|+..|+.++|++|+++|++
T Consensus       171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~  198 (364)
T 3ljn_A          171 KADETPLMRAMEFRNREALDLMMDTVPS  198 (364)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHHHCSC
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence            8888888888888888888888888776

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=2.3e-34  Score=314.84  Aligned_cols=172  Identities=26%  Similarity=0.324  Sum_probs=97.3

Q ss_pred             CCccccCCCCcchhhHHhhcC-------------CHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898          15 ASIHARDDGGLHPLHNACSFG-------------HADVVRLLLEADANPNT-RDNWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus        15 a~~n~~d~~g~t~L~~A~~~g-------------~~~iv~~Ll~~ga~~n~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      .|+|.+|.+|+||||+||..|             +.++|++|++.|++++. .|..|+||||+|+..|+.+++++     
T Consensus         1 ~dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~-----   75 (253)
T 1yyh_A            1 MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKR-----   75 (253)
T ss_dssp             ---------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHH-----
T ss_pred             CCCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHH-----
Confidence            478999999999999999988             89999999999998854 58899999999999999999988     


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPS  160 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~  160 (1236)
                                                |+++|++++..+..|+||||+|+..|+.++++.|++......            
T Consensus        76 --------------------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~------------  117 (253)
T 1yyh_A           76 --------------------------LLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDL------------  117 (253)
T ss_dssp             --------------------------HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCT------------
T ss_pred             --------------------------HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc------------
Confidence                                      999999999888888887777777777777777665421000            


Q ss_pred             cccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCC
Q psy8898         161 QYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANV  240 (1236)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~  240 (1236)
                                                                     ......|.||||+|+..|+.+++++|++.|+++
T Consensus       118 -----------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~  150 (253)
T 1yyh_A          118 -----------------------------------------------DARMHDGTTPLILAARLAVEGMLEDLINSHADV  150 (253)
T ss_dssp             -----------------------------------------------TCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT
T ss_pred             -----------------------------------------------cccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC
Confidence                                                           000113667777777777777777777777777


Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC
Q psy8898         241 NAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH  276 (1236)
Q Consensus       241 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~  276 (1236)
                      +.+|..|+||||+|+..|+.+++++|+++|++++.+
T Consensus       151 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~  186 (253)
T 1yyh_A          151 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQ  186 (253)
T ss_dssp             TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred             CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence            777777777777777777777777777776665543

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.5e-33  Score=313.62  Aligned_cols=183  Identities=23%  Similarity=0.231  Sum_probs=150.8

Q ss_pred             CCcHHHHHHHHHcC-----------CCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCC
Q psy8898           1 YGRKDVVEYLLASG-----------ASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGK   69 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~g-----------a~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~   69 (1236)
                      +|+.+.+..++..+           -.++.+|.+|+||||+||..|+.++|++|+++|+++|..|..|+||||+|+..|+
T Consensus        25 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~  104 (285)
T 3d9h_A           25 DGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGH  104 (285)
T ss_dssp             -----------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTC
T ss_pred             cCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCc
Confidence            36655555554432           2357789999999999999999999999999999999999999999999999999


Q ss_pred             CceEEeeeccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCC
Q psy8898          70 TDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPS  149 (1236)
Q Consensus        70 ~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~  149 (1236)
                      .+++++                               |+++|++++.++..|.||||+|+..|+.++++.|++...... 
T Consensus       105 ~~~v~~-------------------------------Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-  152 (285)
T 3d9h_A          105 LSCVKI-------------------------------LLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-  152 (285)
T ss_dssp             HHHHHH-------------------------------HHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS-
T ss_pred             HHHHHH-------------------------------HHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC-
Confidence            999988                               999999999999999999999999999999998887531100 


Q ss_pred             CCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHH
Q psy8898         150 CAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEV  229 (1236)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~i  229 (1236)
                                                                                  ....|.||||+|+..|+.++
T Consensus       153 ------------------------------------------------------------~~~~g~t~L~~A~~~g~~~~  172 (285)
T 3d9h_A          153 ------------------------------------------------------------PESDLASPIHEAARRGHVEC  172 (285)
T ss_dssp             ------------------------------------------------------------CSCTTSCHHHHHHHHTCHHH
T ss_pred             ------------------------------------------------------------CCCCCCCHHHHHHHcCCHHH
Confidence                                                                        00137899999999999999


Q ss_pred             HHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy8898         230 TEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTL  275 (1236)
Q Consensus       230 v~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~  275 (1236)
                      +++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus       173 v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~  218 (285)
T 3d9h_A          173 VNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ  218 (285)
T ss_dssp             HHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC
Confidence            9999999999999999999999999999999999999999988763

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=2.1e-33  Score=307.15  Aligned_cols=120  Identities=19%  Similarity=0.206  Sum_probs=106.8

Q ss_pred             HHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHH
Q psy8898         677 LEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV  756 (1236)
Q Consensus       677 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~i  756 (1236)
                      |.|+..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|++.|+.++
T Consensus       129 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~---~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~  205 (253)
T 1yyh_A          129 ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV---NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYET  205 (253)
T ss_dssp             HHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHH
Confidence            334566778888888888877777777799999999987   78999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8898         757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       757 v~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~  799 (1236)
                      |++|+++|++++.+|..|+|||++|+++|+.+++++|.+....
T Consensus       206 v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~  248 (253)
T 1yyh_A          206 AKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHH  248 (253)
T ss_dssp             HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC----
T ss_pred             HHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999987543

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=1.6e-34  Score=335.14  Aligned_cols=240  Identities=19%  Similarity=0.178  Sum_probs=159.8

Q ss_pred             CchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCCh
Q psy8898         435 HSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDL  514 (1236)
Q Consensus       435 g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~  514 (1236)
                      |+||||+|+..|+.++|++|+++|++++    ..|..|+||||+|+..|+.+++++|++.+...+.              
T Consensus        20 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--------------   81 (364)
T 3ljn_A           20 NMEKIHVAARKGQTDEVRRLIETGVSPT----IQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--------------   81 (364)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCTT----CCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--------------
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCcc----ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--------------
Confidence            4577888877778888888887777774    3444777777777777777776666544331110              


Q ss_pred             HHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhC----CCCCccCCCCCCCHHHHHHHHHHH
Q psy8898         515 TKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKH----GANVNVADLWKFTPLHEAAAKALL  590 (1236)
Q Consensus       515 ~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~----g~~v~~~d~~g~tpL~~a~~~~Ll  590 (1236)
                                      .           .|+||||+|+..|+.+++++|+++    |++++........         ..
T Consensus        82 ----------------~-----------~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~---------~~  125 (364)
T 3ljn_A           82 ----------------W-----------HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDE---------RE  125 (364)
T ss_dssp             ----------------B-----------TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCC---------CC
T ss_pred             ----------------c-----------CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcch---------Hh
Confidence                            0           166778888888888888888877    5554430000000         00


Q ss_pred             hcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhh
Q psy8898         591 QHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDE  670 (1236)
Q Consensus       591 ~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  670 (1236)
                      ....+++..|..|.||||+|                                                            
T Consensus       126 ~~~~~~~~~~~~g~t~L~~A------------------------------------------------------------  145 (364)
T 3ljn_A          126 VNEIGSHVKHCKGQTALHWC------------------------------------------------------------  145 (364)
T ss_dssp             EEEETTEEEEESCCCHHHHH------------------------------------------------------------
T ss_pred             hhhhccccCCCCCCCHHHHH------------------------------------------------------------
Confidence            01123344666677766665                                                            


Q ss_pred             ccccHHHHHHHcC--CHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCC-----CCCCCCCCch
Q psy8898         671 FKGHCLLEACRQG--DPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAH-----LNEKNKELLA  743 (1236)
Q Consensus       671 ~~~~~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gad-----in~~d~~G~T  743 (1236)
                               +..|  +.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++     +|.+|..|+|
T Consensus       146 ---------~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t  213 (364)
T 3ljn_A          146 ---------VGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEF---RNREALDLMMDTVPSKSSLRLDYANKQGNS  213 (364)
T ss_dssp             ---------HHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred             ---------HHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc---CCHHHHHHHHhcccccccccccccCCCCCc
Confidence                     3455  66777777777666666666677777777776   677777777777777     7777777777


Q ss_pred             HHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy8898         744 PIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADT  800 (1236)
Q Consensus       744 ~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~  800 (1236)
                      |||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus       214 ~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~  270 (364)
T 3ljn_A          214 HLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF  270 (364)
T ss_dssp             TTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence            777777777777777777777777777777777777777777777777777777654

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=1.4e-33  Score=314.87  Aligned_cols=263  Identities=21%  Similarity=0.173  Sum_probs=179.4

Q ss_pred             ccccCCCCcchhhHHhhcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccC
Q psy8898          17 IHARDDGGLHPLHNACSFGHADVVRLLLEADAN---PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIG   93 (1236)
Q Consensus        17 ~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~---~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~   93 (1236)
                      ++.+|.+|+||||+||..|+.++|++|+++|++   ++.+|..|+||||+|+..|+.+++++                  
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~------------------   63 (282)
T 1oy3_D            2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK------------------   63 (282)
T ss_dssp             CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHH------------------
T ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHH------------------
Confidence            467899999999999999999999999999998   88999999999999999999999988                  


Q ss_pred             CCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCC
Q psy8898          94 GGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSL  173 (1236)
Q Consensus        94 ~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (1236)
                                   |+++|++++.++..|+||||+|+..|+.++++.|++..............                 
T Consensus        64 -------------Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~-----------------  113 (282)
T 1oy3_D           64 -------------LYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYL-----------------  113 (282)
T ss_dssp             -------------HHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------
T ss_pred             -------------HHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHh-----------------
Confidence                         99999999999999999999999999999999999765322111100000                 


Q ss_pred             CCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHH-HHHHHHhcCCCCCCCCCCCCcHHH
Q psy8898         174 PPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFE-VTEMLIKAGANVNAMDLWQFTPLH  252 (1236)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~-iv~~Ll~~ga~~n~~d~~g~TpL~  252 (1236)
                                                    ..........+.++++.++..+... ....+...+++++..|..|+||||
T Consensus       114 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~  163 (282)
T 1oy3_D          114 ------------------------------TQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH  163 (282)
T ss_dssp             ------------------------------------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred             ------------------------------hcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence                                          0000011113556666666654433 334444567778888888888888


Q ss_pred             HHHHcCcHHHHHHHHhCCCCCCCCCCC-CCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCC
Q psy8898         253 EAASKSRLEVCSLLLSEGADPTLHNCH-SKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHP  331 (1236)
Q Consensus       253 ~A~~~g~~~iv~~Ll~~ga~~~~~~~~-g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~  331 (1236)
                      +|+..|+.++|++|+++|++++..+.. |.||                                                
T Consensus       164 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tp------------------------------------------------  195 (282)
T 1oy3_D          164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP------------------------------------------------  195 (282)
T ss_dssp             HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH------------------------------------------------
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCH------------------------------------------------
Confidence            888888888888888888887766532 3333                                                


Q ss_pred             CCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCC
Q psy8898         332 YTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGD  411 (1236)
Q Consensus       332 ~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~  411 (1236)
                                                                                             ||.|+..|+
T Consensus       196 -----------------------------------------------------------------------L~~A~~~~~  204 (282)
T 1oy3_D          196 -----------------------------------------------------------------------LHLAVEAQA  204 (282)
T ss_dssp             -----------------------------------------------------------------------HHHHHHTTC
T ss_pred             -----------------------------------------------------------------------HHHHHHcCC
Confidence                                                                                   455566677


Q ss_pred             HHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcC
Q psy8898         412 MTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG  483 (1236)
Q Consensus       412 ~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~  483 (1236)
                      .+++++|++. +.+++.++..|  +||||+|+..|+.+++++|+++|++++    .+|..|.|||++|....
T Consensus       205 ~~~v~~Ll~~-gad~~~~d~~g--~tpL~~A~~~~~~~~v~~Ll~~ga~~~----~~~~~g~tpl~~a~~~~  269 (282)
T 1oy3_D          205 ASVLELLLKA-GADPTARMYGG--RTPLGSALLRPNPILARLLRAHGAPEP----EDGGDKLSPCSSSGSDS  269 (282)
T ss_dssp             HHHHHHHHHT-TCCTTCCCTTS--CCHHHHHHTSSCHHHHHHHHHTTCCCC----CCC--------------
T ss_pred             HHHHHHHHHc-CCCCcccccCC--CCHHHHHHHcCCcHHHHHHHHcCCCcC----cCCCcccccccccCCcc
Confidence            7777777776 67777776655  499999999999999999999999995    45559999999998754

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=1.4e-32  Score=297.95  Aligned_cols=170  Identities=25%  Similarity=0.298  Sum_probs=125.4

Q ss_pred             CCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCC
Q psy8898          15 ASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGG   94 (1236)
Q Consensus        15 a~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~   94 (1236)
                      .+++.+|.+|+||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++                   
T Consensus         2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------------------   62 (237)
T 3b7b_A            2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKY-------------------   62 (237)
T ss_dssp             CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH-------------------
T ss_pred             CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHH-------------------
Confidence            4788899999999999999999999999999999999999999999999999999999988                   


Q ss_pred             CCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCC
Q psy8898          95 GTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLP  174 (1236)
Q Consensus        95 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (1236)
                                  |+++|++++..+..|.||||+|+..|+.++++.|++......                          
T Consensus        63 ------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~--------------------------  104 (237)
T 3b7b_A           63 ------------LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDV--------------------------  104 (237)
T ss_dssp             ------------HHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCT--------------------------
T ss_pred             ------------HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc--------------------------
Confidence                        999999999887777776666666666666666654321000                          


Q ss_pred             CCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy8898         175 PPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEA  254 (1236)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A  254 (1236)
                                                       ......|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|
T Consensus       105 ---------------------------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A  151 (237)
T 3b7b_A          105 ---------------------------------NCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWA  151 (237)
T ss_dssp             ---------------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             ---------------------------------ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHH
Confidence                                             00001255666666666666666666666666666666666666666


Q ss_pred             HHcCcHHHHHHHHhCCCCCC
Q psy8898         255 ASKSRLEVCSLLLSEGADPT  274 (1236)
Q Consensus       255 ~~~g~~~iv~~Ll~~ga~~~  274 (1236)
                      +..|+.+++++|+++|++++
T Consensus       152 ~~~~~~~~~~~Ll~~g~~~~  171 (237)
T 3b7b_A          152 AFSGCVDIAEILLAAKCDLH  171 (237)
T ss_dssp             HHHCCHHHHHHHHTTTCCTT
T ss_pred             HHCCCHHHHHHHHHcCCCCC
Confidence            66666666666666655544

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=5.7e-33  Score=301.90  Aligned_cols=172  Identities=26%  Similarity=0.313  Sum_probs=131.8

Q ss_pred             ccccCCCCcchhhHHhhcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCcccccccccc
Q psy8898          17 IHARDDGGLHPLHNACSFGHADVVRLLLE----ADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGI   92 (1236)
Q Consensus        17 ~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~   92 (1236)
                      ++.+|.+|+||||+||..|+.++|++|++    .|++++..|..|.||||+|+..|+.+++++                 
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~-----------------   64 (241)
T 1k1a_A            2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRL-----------------   64 (241)
T ss_dssp             -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH-----------------
T ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHH-----------------
Confidence            45689999999999999999999999997    899999999999999999999999999988                 


Q ss_pred             CCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCC
Q psy8898          93 GGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVS  172 (1236)
Q Consensus        93 ~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (1236)
                                    |+++|++++..+..|.||||+|+..++.++++.+++........                      
T Consensus        65 --------------Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~----------------------  108 (241)
T 1k1a_A           65 --------------LVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD----------------------  108 (241)
T ss_dssp             --------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC----------------------
T ss_pred             --------------HHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc----------------------
Confidence                          99999999998888888888888777777777777653210000                      


Q ss_pred             CCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCcHH
Q psy8898         173 LPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMD-LWQFTPL  251 (1236)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d-~~g~TpL  251 (1236)
                                                        .......|.||||+|+..|+.+++++|++.|++++..+ ..|.|||
T Consensus       109 ----------------------------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L  154 (241)
T 1k1a_A          109 ----------------------------------LEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPL  154 (241)
T ss_dssp             ----------------------------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHH
T ss_pred             ----------------------------------ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHH
Confidence                                              00011136677777777777777777777777777776 6677777


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCCCC
Q psy8898         252 HEAASKSRLEVCSLLLSEGADPTL  275 (1236)
Q Consensus       252 ~~A~~~g~~~iv~~Ll~~ga~~~~  275 (1236)
                      |+|+..|+.+++++|+++|++++.
T Consensus       155 ~~A~~~~~~~~v~~Ll~~g~~~~~  178 (241)
T 1k1a_A          155 IHAVENNSLSMVQLLLQHGANVNA  178 (241)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCC
Confidence            777777777777777777766544

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=1.1e-32  Score=297.38  Aligned_cols=225  Identities=24%  Similarity=0.264  Sum_probs=177.2

Q ss_pred             hhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHH
Q psy8898         399 LESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHE  478 (1236)
Q Consensus       399 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~  478 (1236)
                      ..++|+.|+..|+++.+++|++..+..++..+.++  +||||+|+..|+.+++++|+++|++++..+.    .       
T Consensus         6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----~-------   72 (231)
T 3aji_A            6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDS--RTALHWACSAGHTEIVEFLLQLGVPVNDKDD----A-------   72 (231)
T ss_dssp             SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTS--CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT----T-------
T ss_pred             ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCC--CCHHHHHHHcCcHHHHHHHHHhCCCCCCcCC----C-------
Confidence            45678888888888888888887666566655554  4888888888888888888888888744332    3       


Q ss_pred             HHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHH
Q psy8898         479 AAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYE  558 (1236)
Q Consensus       479 A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~  558 (1236)
                                                                                       |+||||+|+..|+.+
T Consensus        73 -----------------------------------------------------------------g~t~L~~A~~~~~~~   87 (231)
T 3aji_A           73 -----------------------------------------------------------------GWSPLHIAASAGXDE   87 (231)
T ss_dssp             -----------------------------------------------------------------SCCHHHHHHHHTCHH
T ss_pred             -----------------------------------------------------------------CCCHHHHHHHcCHHH
Confidence                                                                             455666666666677


Q ss_pred             HHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCc
Q psy8898         559 VTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGL  638 (1236)
Q Consensus       559 iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~  638 (1236)
                      ++++|+++|++++..|..|.||                                                          
T Consensus        88 ~v~~Ll~~g~~~~~~~~~g~t~----------------------------------------------------------  109 (231)
T 3aji_A           88 IVKALLVKGAHVNAVNQNGCTP----------------------------------------------------------  109 (231)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCH----------------------------------------------------------
T ss_pred             HHHHHHHcCCCCCCCCCCCCCH----------------------------------------------------------
Confidence            7777777666655444333322                                                          


Q ss_pred             ccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCC
Q psy8898         639 HRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYP  718 (1236)
Q Consensus       639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~  718 (1236)
                                                           ||.|+..|+.+++++|++.+......+..|.||||+|+..   
T Consensus       110 -------------------------------------L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~---  149 (231)
T 3aji_A          110 -------------------------------------LHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK---  149 (231)
T ss_dssp             -------------------------------------HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH---
T ss_pred             -------------------------------------HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc---
Confidence                                                 2233455666677777776665555556688888888886   


Q ss_pred             ChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8898         719 KRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA  798 (1236)
Q Consensus       719 ~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga  798 (1236)
                      ++.+++++|+++|++++.+|..|+||||+|++.|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|+
T Consensus       150 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a  229 (231)
T 3aji_A          150 GNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA  229 (231)
T ss_dssp             TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             C
Q psy8898         799 D  799 (1236)
Q Consensus       799 ~  799 (1236)
                      +
T Consensus       230 ~  230 (231)
T 3aji_A          230 S  230 (231)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=8.9e-33  Score=300.37  Aligned_cols=124  Identities=23%  Similarity=0.222  Sum_probs=107.6

Q ss_pred             ccHHHHHHHcCCHHHHHHhhccCCcccCCC-CCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHh
Q psy8898         673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHP-YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADL  751 (1236)
Q Consensus       673 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~  751 (1236)
                      .||||.|+..|+.+++++|++.+......+ ..|.||||+|+..   ++.+++++|+++|++++.+|..|+||||+|++.
T Consensus       117 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  193 (241)
T 1k1a_A          117 LTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN---NSLSMVQLLLQHGANVNAQMYSGSSALHSASGR  193 (241)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence            344455577889999999999987666666 6699999999997   889999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8898         752 GHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       752 g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~  799 (1236)
                      |+.+++++|+++|++++.+|..|+|||++|+..|+.++++.|++++++
T Consensus       194 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~aS  241 (241)
T 1k1a_A          194 GLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS  241 (241)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-------
T ss_pred             CCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCCC
Confidence            999999999999999999999999999999999999999999998863

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=3.1e-33  Score=310.94  Aligned_cols=182  Identities=18%  Similarity=0.145  Sum_probs=156.0

Q ss_pred             CcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeecccc
Q psy8898           2 GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEH   81 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~   81 (1236)
                      ...+++++|.+.  ++|.+|.+|+||||+||..|+.++|++|+++|++++..|  |+||||+|+..|+.+++++      
T Consensus        11 ~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~------   80 (285)
T 3kea_A           11 KSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKI------   80 (285)
T ss_dssp             CHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHH------
T ss_pred             CHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHH------
Confidence            345666666655  688999999999999999999999999999999999985  9999999999999999988      


Q ss_pred             CccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCc
Q psy8898          82 SSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQ  161 (1236)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~  161 (1236)
                                               |+++|++++.++..|+||||+|+..|+.++++.|++..                 
T Consensus        81 -------------------------Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----------------  118 (285)
T 3kea_A           81 -------------------------LLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN-----------------  118 (285)
T ss_dssp             -------------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC-----------------
T ss_pred             -------------------------HHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC-----------------
Confidence                                     99999999999999999999999999888888877652                 


Q ss_pred             ccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CC-chHHHHHHhcCcHHHHHHHHhc
Q psy8898         162 YSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LG-LVPLHNACSYGHFEVTEMLIKA  236 (1236)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g-~T~L~~Aa~~g~~~iv~~Ll~~  236 (1236)
                                                                     ++++    .| .||||+|+..|+.+++++|+++
T Consensus       119 -----------------------------------------------a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~  151 (285)
T 3kea_A          119 -----------------------------------------------WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE  151 (285)
T ss_dssp             -----------------------------------------------GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT
T ss_pred             -----------------------------------------------CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence                                                           2222    35 6899999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCc
Q psy8898         237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSA  283 (1236)
Q Consensus       237 ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~  283 (1236)
                      |+++... ..|+||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus       152 g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~  197 (285)
T 3kea_A          152 IPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIP  197 (285)
T ss_dssp             SCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCT
T ss_pred             CCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCCh
Confidence            8876332 278899999999999999999999999988888776665

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=6.1e-32  Score=292.81  Aligned_cols=226  Identities=25%  Similarity=0.286  Sum_probs=180.7

Q ss_pred             ccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHH
Q psy8898         426 VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLREL  505 (1236)
Q Consensus       426 ~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L  505 (1236)
                      ++..+.+  |.||||+|+..|+.+++++|+++|++++.    .+..|+||||+|+..|+.+++++|++.+...+      
T Consensus         4 ~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------   71 (237)
T 3b7b_A            4 FKMEHQN--KRSPLHAAAEAGHVDICHMLVQAGANIDT----CSEDQRTPLMEAAENNHLEAVKYLIKAGALVD------   71 (237)
T ss_dssp             CCCSSCC--SCCHHHHHHHHTCHHHHHHHHHTTCCTTC----CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC------
T ss_pred             cccccCC--CCCHHHHHHHcCcHHHHHHHHHcCCCcCc----cCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC------
Confidence            3444444  45999999999999999999999999854    44578888888888777777777655433221      


Q ss_pred             HHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCC-CCCccCCCCCCCHHHHH
Q psy8898         506 FEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHG-ANVNVADLWKFTPLHEA  584 (1236)
Q Consensus       506 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~v~~~d~~g~tpL~~a  584 (1236)
                                            ..+.           .|.||||+|+..|+.+++++|+++| ++++..+.         
T Consensus        72 ----------------------~~~~-----------~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~---------  109 (237)
T 3b7b_A           72 ----------------------PKDA-----------EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD---------  109 (237)
T ss_dssp             ----------------------CCCT-----------TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT---------
T ss_pred             ----------------------CCCC-----------CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC---------
Confidence                                  1111           2778888888888888888888876 55544433         


Q ss_pred             HHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCccccccccccccc
Q psy8898         585 AAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFM  664 (1236)
Q Consensus       585 ~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  664 (1236)
                                       .|.|                                                           
T Consensus       110 -----------------~g~t-----------------------------------------------------------  113 (237)
T 3b7b_A          110 -----------------GGWT-----------------------------------------------------------  113 (237)
T ss_dssp             -----------------TSCC-----------------------------------------------------------
T ss_pred             -----------------CCCC-----------------------------------------------------------
Confidence                             3333                                                           


Q ss_pred             ccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchH
Q psy8898         665 PRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAP  744 (1236)
Q Consensus       665 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~  744 (1236)
                                ||+.|+..|+.+++++|++.+......+..|.||||+|+..   ++.+++++|+++|++++.+|..|+||
T Consensus       114 ----------~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~  180 (237)
T 3b7b_A          114 ----------PMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFS---GCVDIAEILLAAKCDLHAVNIHGDSP  180 (237)
T ss_dssp             ----------HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH---CCHHHHHHHHTTTCCTTCCCTTCCCH
T ss_pred             ----------HHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHC---CCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence                      34444667888999999998887777777799999999997   78999999999999999999999999


Q ss_pred             HHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy8898         745 IHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL  794 (1236)
Q Consensus       745 Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll  794 (1236)
                      ||+|++.|+.+++++|+++|++++.+|.+|+||||+|+.+++.+.+..|+
T Consensus       181 L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~  230 (237)
T 3b7b_A          181 LHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS  230 (237)
T ss_dssp             HHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred             HHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999986655544

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=8.8e-33  Score=307.28  Aligned_cols=258  Identities=21%  Similarity=0.211  Sum_probs=181.8

Q ss_pred             hCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHH
Q psy8898         408 KGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQL  487 (1236)
Q Consensus       408 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~i  487 (1236)
                      +..+.+.+..++...  .++..+.+|  +||||+|+..|+.++|++|+++|++++..      +|+||||+|+..|+.++
T Consensus         8 ~~~~~~~v~~lL~~~--~~~~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~------~g~t~L~~A~~~g~~~~   77 (285)
T 3kea_A            8 NTWKSKQLKSFLSSK--DTFKADVHG--HSASYYAIADNNVRLVCTLLNAGALKNLL------ENEFPLHQAATLEDTKI   77 (285)
T ss_dssp             GGCCHHHHHHHHHST--TTTCCCTTS--CCHHHHHHHTTCHHHHHHHHHTTGGGSCC------TTCCHHHHHTTSSSCHH
T ss_pred             HhcCHHHHHHHHHhC--CCCccCCCC--CCHHHHHHHcCCHHHHHHHHhCCCCCCCC------CCCCHHHHHHHcCCHHH
Confidence            445556666666552  466666555  59999999999999999999999988544      25565555555544444


Q ss_pred             HhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCC
Q psy8898         488 SALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHG  567 (1236)
Q Consensus       488 v~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g  567 (1236)
                      +++|++.+...+                            ..+.           .|+||||+|+..|+.+++++|+++|
T Consensus        78 v~~Ll~~ga~~~----------------------------~~d~-----------~g~t~L~~A~~~g~~~~v~~Ll~~g  118 (285)
T 3kea_A           78 VKILLFSGLDDS----------------------------QFDD-----------KGNTALYYAVDSGNMQTVKLFVKKN  118 (285)
T ss_dssp             HHHHHHTTCCTT----------------------------CCCT-----------TSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred             HHHHHHCCCCCC----------------------------CcCC-----------CCCcHHHHHHHcCCHHHHHHHHhcC
Confidence            444433222111                            1111           1445555555555555555555544


Q ss_pred             CCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCC-CChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCC
Q psy8898         568 ANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDG-KTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLG  646 (1236)
Q Consensus       568 ~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g-~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  646 (1236)
                      +                          +++..+..| .|||                                       
T Consensus       119 a--------------------------~~~~~~~~g~~t~L---------------------------------------  133 (285)
T 3kea_A          119 W--------------------------RLMFYGKTGWKTSF---------------------------------------  133 (285)
T ss_dssp             G--------------------------GGGGCSSSGGGSHH---------------------------------------
T ss_pred             C--------------------------CCCccCCCCCCCHH---------------------------------------
Confidence            4                          444444444 3444                                       


Q ss_pred             CCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHH
Q psy8898         647 TTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVES  726 (1236)
Q Consensus       647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~  726 (1236)
                                                    |.|+..|+.+++++|++.+...... ..|+||||+|+..   ++.+++++
T Consensus       134 ------------------------------~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~---g~~~~v~~  179 (285)
T 3kea_A          134 ------------------------------YHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKN---GHVDMMIL  179 (285)
T ss_dssp             ------------------------------HHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHT---TCHHHHHH
T ss_pred             ------------------------------HHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHc---ChHHHHHH
Confidence                                          4446788999999999998755332 2699999999997   89999999


Q ss_pred             HHHcCCCCCCCCCCCchH-HHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q psy8898         727 LIRKGAHLNEKNKELLAP-IHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSL  805 (1236)
Q Consensus       727 Ll~~gadin~~d~~G~T~-Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~  805 (1236)
                      |+++|++++.+|..|+|| ||+|++.|+.++|++|+++|++++.+|       +.|+..|+.+++++|+++|+++...+.
T Consensus       180 Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~-------~~a~~~~~~~iv~~Ll~~g~~~~~~~~  252 (285)
T 3kea_A          180 LLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN-------LENVLLDDAEIAKMIIEKHVEYKSDSY  252 (285)
T ss_dssp             HHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT-------GGGGTTTCHHHHHHHHHHHHHHTTCTT
T ss_pred             HHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-------hhhhhcCCHHHHHHHHHcCCCCCCccc
Confidence            999999999999999998 999999999999999999999999988       367889999999999999998877654


Q ss_pred             cchhHHHhhhchHHH
Q psy8898         806 LVIFSCSTNLGLKHL  820 (1236)
Q Consensus       806 ~~~~~~~~~~~~~~~  820 (1236)
                      ...+.........++
T Consensus       253 ~~~~~~~~~~~~~~i  267 (285)
T 3kea_A          253 TKDLDIVKNNKLDEI  267 (285)
T ss_dssp             TTTCHHHHTCSHHHH
T ss_pred             cchHHHHhhhhHHHH
Confidence            433333344333333

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.98  E-value=1.8e-32  Score=305.89  Aligned_cols=120  Identities=18%  Similarity=0.068  Sum_probs=87.5

Q ss_pred             cccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCC-CCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCc
Q psy8898         664 MPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPY-TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELL  742 (1236)
Q Consensus       664 ~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~  742 (1236)
                      +++.++..|.||||.|+..|+.+++++|++.+......+. .|+||||+|+..   ++.+++++|+++|++++.+|..|+
T Consensus       150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~---~~~~~v~~Ll~~gad~~~~d~~g~  226 (282)
T 1oy3_D          150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA---QAASVLELLLKAGADPTARMYGGR  226 (282)
T ss_dssp             GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHc---CCHHHHHHHHHcCCCCcccccCCC
Confidence            4556677778888888888888888888888776665554 388888888886   788888888888888888888888


Q ss_pred             hHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCC
Q psy8898         743 APIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDK  786 (1236)
Q Consensus       743 T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~  786 (1236)
                      ||||+|++.|+.++|++|+++|++++.+|..|.|||++|.....
T Consensus       227 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~  270 (282)
T 1oy3_D          227 TPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD  270 (282)
T ss_dssp             CHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred             CHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence            88888888888888888888888888888888888888876553

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.98  E-value=2.2e-32  Score=300.07  Aligned_cols=93  Identities=20%  Similarity=0.231  Sum_probs=46.7

Q ss_pred             cccCCCCcchhhHHhhcCCHHHHHHHHHCCCC--------CCCCCCCCCCHHHHHHHhCCCc-eEEeeeccccCcccccc
Q psy8898          18 HARDDGGLHPLHNACSFGHADVVRLLLEADAN--------PNTRDNWNFTPLHEAAAKGKTD-VCIGIYFAEHSSKSNQY   88 (1236)
Q Consensus        18 n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~--------~n~~d~~g~t~L~~A~~~g~~~-iv~~Ll~~~~~~~~~~~   88 (1236)
                      ..+|..+.|||+.||..|+.++|++|++.|++        ++..|..|.||||+|+..++.+ ++++             
T Consensus         5 ~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~-------------   71 (269)
T 4b93_B            5 TKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAK-------------   71 (269)
T ss_dssp             --CCCHHHHHHHHHHHTTCHHHHHHHHTCC--------------------------------------------------
T ss_pred             cccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHH-------------
Confidence            35678889999999999999999999999875        4677888999999999888764 6666             


Q ss_pred             ccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHH
Q psy8898          89 VYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAM  141 (1236)
Q Consensus        89 ~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~  141 (1236)
                                        |+++|++++.+|.+|+||||+|+..|+.++|+.|+
T Consensus        72 ------------------Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll  106 (269)
T 4b93_B           72 ------------------VPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLL  106 (269)
T ss_dssp             ---------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHH
T ss_pred             ------------------HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence                              99999999988777666555555444444444333

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.97  E-value=4.2e-32  Score=291.06  Aligned_cols=214  Identities=27%  Similarity=0.325  Sum_probs=193.2

Q ss_pred             CcHHHHHHHHHcCCCcccc-CCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898           2 GRKDVVEYLLASGASIHAR-DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      |+.++|++|+++|++++.. |.+|+||||+||..|+.++|++|+++|++++..|..|+||||+|+..|+.+++++     
T Consensus         2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~-----   76 (223)
T 2f8y_A            2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQI-----   76 (223)
T ss_dssp             ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH-----
T ss_pred             CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH-----
Confidence            7899999999999999876 8999999999999999999999999999999999999999999999999999988     


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCC-CCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGA-DPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPP  159 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~  159 (1236)
                                                |+++|+ +++..+..|.||||+|+..++.++++.|++......           
T Consensus        77 --------------------------Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----------  119 (223)
T 2f8y_A           77 --------------------------LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN-----------  119 (223)
T ss_dssp             --------------------------HHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-----------
T ss_pred             --------------------------HHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc-----------
Confidence                                      999987 899999999999999999999999999887531100           


Q ss_pred             CcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCC
Q psy8898         160 SQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGAN  239 (1236)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~  239 (1236)
                                                                       .....|.||||+|+..|+.+++++|+++|++
T Consensus       120 -------------------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  150 (223)
T 2f8y_A          120 -------------------------------------------------AVDDLGKSALHWAAAVNNVDAAVVLLKNGAN  150 (223)
T ss_dssp             -------------------------------------------------CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             -------------------------------------------------CcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence                                                             0011489999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHH
Q psy8898         240 VNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKK  319 (1236)
Q Consensus       240 ~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~  319 (1236)
                      ++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||                     ++.|++.++.+++++
T Consensus       151 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~---------------------l~~A~~~~~~~i~~~  209 (223)
T 2f8y_A          151 KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP---------------------RDIAQERMHHDIVRL  209 (223)
T ss_dssp             TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCH---------------------HHHHHHTTCHHHHHH
T ss_pred             CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCH---------------------HHHHHHhcchHHHHH
Confidence            99999999999999999999999999999999999999988888                     677899999999999


Q ss_pred             hhhccccc
Q psy8898         320 FLTSDVVN  327 (1236)
Q Consensus       320 ll~~~~~~  327 (1236)
                      |++.+...
T Consensus       210 L~~~g~~~  217 (223)
T 2f8y_A          210 LDEYNLVR  217 (223)
T ss_dssp             HHHTTCSS
T ss_pred             HHHcCCCc
Confidence            99887643

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.9e-32  Score=300.52  Aligned_cols=219  Identities=26%  Similarity=0.302  Sum_probs=164.0

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCCCC--------CccCCCCCCCHHHHHH--------HHHHHhcCCCCcccCCCCCChh
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHGAN--------VNVADLWKFTPLHEAA--------AKALLQHGADINLKNTDGKTAL  607 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g~~--------v~~~d~~g~tpL~~a~--------~~~Ll~~g~d~~~~~~~g~t~L  607 (1236)
                      +.+||+.||..|+.++|++|+++|++        ++..+..|.|||+.|+        +++|++.|+++|.+|.+|+|||
T Consensus        11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpL   90 (269)
T 4b93_B           11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPL   90 (269)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHH
T ss_pred             chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence            67899999999999999999999875        5667888999999886        4589999999999999999999


Q ss_pred             hhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHH
Q psy8898         608 DLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSR  687 (1236)
Q Consensus       608 ~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~  687 (1236)
                      |+|+      ..++.+++++|..                              ...+++.++..|.||++.|+..++.++
T Consensus        91 h~A~------~~g~~~~v~~Ll~------------------------------~~a~~~~~~~~g~t~l~~a~~~~~~~~  134 (269)
T 4b93_B           91 HVAA------LHGRADLIPLLLK------------------------------HGANAGARNADQAVPLHLACQQGHFQV  134 (269)
T ss_dssp             HHHH------HTTCTTHHHHHHH------------------------------TTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred             HHHH------HcCcHHHHHHHHh------------------------------cCCCcCccCCCCCCccccccccChHHH
Confidence            9997      6678888887765                              123455677788999999999999999


Q ss_pred             HHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCc
Q psy8898         688 VKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKV  767 (1236)
Q Consensus       688 v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~  767 (1236)
                      +++|++.+......+..|+||||+|+..   |+.++|++|+++|+|+|.+|..|+||||+|+..|+.++|++|+++|+|+
T Consensus       135 ~~~Ll~~g~~~n~~d~~g~TpL~~A~~~---g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~  211 (269)
T 4b93_B          135 VKCLLDSNAKPNKKDLSGNTPLIYACSG---GHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASV  211 (269)
T ss_dssp             HHHHHHTTCCSCCCCTTCCCHHHHHHHT---TCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHC---CCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Confidence            9999999887777778899999999987   7889999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCCC
Q psy8898         768 NLVDVLGQTALHRTARDDK-TQAVRVLLSHNADTS  801 (1236)
Q Consensus       768 n~~d~~G~tpL~~A~~~~~-~~iv~~Ll~~ga~~~  801 (1236)
                      |.+|.+|+||||+|+++++ .+++++|.+.++..+
T Consensus       212 ~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~~  246 (269)
T 4b93_B          212 QVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASLD  246 (269)
T ss_dssp             CCCCTTSCCSGGGSCTTCHHHHHTTC---------
T ss_pred             CCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhhh
Confidence            9999999999999988776 455556666655443

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.97  E-value=3.9e-32  Score=305.90  Aligned_cols=220  Identities=33%  Similarity=0.402  Sum_probs=188.9

Q ss_pred             CCcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898           1 YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      +|+.++|++|+++|+++|.+|.+|+||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++     
T Consensus        50 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~-----  124 (299)
T 1s70_B           50 SGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEY-----  124 (299)
T ss_dssp             HTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH-----
T ss_pred             cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH-----
Confidence            489999999999999999999999999999999999999999999999999999999999999999999999988     


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPS  160 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~  160 (1236)
                                                |+++|++++..+..|.||||+|+..++.++++.++............       
T Consensus       125 --------------------------Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~-------  171 (299)
T 1s70_B          125 --------------------------LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARK-------  171 (299)
T ss_dssp             --------------------------HHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHH-------
T ss_pred             --------------------------HHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhh-------
Confidence                                      99999999999999999999999999999999888653110000000       


Q ss_pred             cccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccc-----cCCchHHHHHHhcCcHHHHHHHHh
Q psy8898         161 QYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAV-----ALGLVPLHNACSYGHFEVTEMLIK  235 (1236)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~-----~~g~T~L~~Aa~~g~~~iv~~Ll~  235 (1236)
                                           .         ...+.... +..++..+...     ..|.||||+||..|+.++|++|++
T Consensus       172 ---------------------~---------~~~~~~~~-~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  220 (299)
T 1s70_B          172 ---------------------E---------EERIMLRD-ARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ  220 (299)
T ss_dssp             ---------------------H---------HHHHHHHH-HHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred             ---------------------h---------hhhHHHHH-HHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH
Confidence                                 0         00111111 22233333222     269999999999999999999999


Q ss_pred             cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q psy8898         236 AGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPT  289 (1236)
Q Consensus       236 ~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~  289 (1236)
                      +|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||+++|..
T Consensus       221 ~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~  274 (299)
T 1s70_B          221 ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE  274 (299)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999853

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.97  E-value=1.4e-31  Score=301.28  Aligned_cols=92  Identities=24%  Similarity=0.286  Sum_probs=80.5

Q ss_pred             CCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHH
Q psy8898         701 HPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHR  780 (1236)
Q Consensus       701 ~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~  780 (1236)
                      .+..|.||||+|+..   ++.+++++|+++|+++|.+|..|+||||+|++.|+.++|++|+++|++++.+|..|+||||+
T Consensus       195 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~  271 (299)
T 1s70_B          195 HAKSGGTALHVAAAK---GYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV  271 (299)
T ss_dssp             CTTTCCCHHHHHHHH---TCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTS
T ss_pred             hcCCCCCHHHHHHHC---CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence            334588999999987   78999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHh
Q psy8898         781 TARDDKTQAVRVLLS  795 (1236)
Q Consensus       781 A~~~~~~~iv~~Ll~  795 (1236)
                      |++.....+.+++-+
T Consensus       272 A~~~~~~~l~~l~~~  286 (299)
T 1s70_B          272 ADEDILGYLEELQKK  286 (299)
T ss_dssp             CCSGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            977554444444433

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.97  E-value=7.9e-31  Score=284.79  Aligned_cols=230  Identities=22%  Similarity=0.198  Sum_probs=177.7

Q ss_pred             CCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCC
Q psy8898         434 RHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGD  513 (1236)
Q Consensus       434 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~  513 (1236)
                      .+.|||+.|+..|+.+++++|++.|++++    ..+..|.||||+|+..|+.+++++|++.+.....             
T Consensus         8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-------------   70 (240)
T 3eu9_A            8 YSTWDIVKATQYGIYERCRELVEAGYDVR----QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQ-------------   70 (240)
T ss_dssp             GGGCCHHHHHHTTCHHHHHHHHHTTCCTT----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------------
T ss_pred             ccchHHHHHHHcCChHHHHHHHHcCCCcC----CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchh-------------
Confidence            34578888888888888888888888774    3444777777777777777666666544332210             


Q ss_pred             hHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcC
Q psy8898         514 LTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHG  593 (1236)
Q Consensus       514 ~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g  593 (1236)
                                     .. ..         .|+||||+|+..|+.+++++|+++|++++..+..|.||             
T Consensus        71 ---------------~~-~~---------~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~-------------  112 (240)
T 3eu9_A           71 ---------------LG-GD---------LNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSC-------------  112 (240)
T ss_dssp             ---------------CB-TT---------TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH-------------
T ss_pred             ---------------hc-CC---------cCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCH-------------
Confidence                           00 00         26788999999999999999998887776555444333             


Q ss_pred             CCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccc
Q psy8898         594 ADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKG  673 (1236)
Q Consensus       594 ~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  673 (1236)
                                                                                                      
T Consensus       113 --------------------------------------------------------------------------------  112 (240)
T 3eu9_A          113 --------------------------------------------------------------------------------  112 (240)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCC-CCchHHHHHHHhC
Q psy8898         674 HCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNK-ELLAPIHLAADLG  752 (1236)
Q Consensus       674 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~-~G~T~Lh~A~~~g  752 (1236)
                        |+.|+..|+.+++++|++.+......+..|.||||+|+..  .+..+++++|++.|++++..+. .|+||||+|++.|
T Consensus       113 --l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~  188 (240)
T 3eu9_A          113 --IHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYR--THSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAG  188 (240)
T ss_dssp             --HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH--CCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHT
T ss_pred             --HHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh--CChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcC
Confidence              3344567778888888888777666677788999999864  1347899999999999999997 9999999999999


Q ss_pred             CHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q psy8898         753 HLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSI  802 (1236)
Q Consensus       753 ~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~  802 (1236)
                      +.++|++|+++|++++.+|..|+|||++|++.|+.+++++|++++++...
T Consensus       189 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~  238 (240)
T 3eu9_A          189 NTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGY  238 (240)
T ss_dssp             CHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-----
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccCc
Confidence            99999999999999999999999999999999999999999999987654

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.97  E-value=6.6e-31  Score=285.37  Aligned_cols=145  Identities=26%  Similarity=0.296  Sum_probs=118.7

Q ss_pred             CccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCC
Q psy8898          16 SIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGG   95 (1236)
Q Consensus        16 ~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~   95 (1236)
                      +++..|..|.|||+.|+..|+.++|++|++.|++++..|..|.||||+|+..|+.+++++                    
T Consensus         1 h~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~--------------------   60 (240)
T 3eu9_A            1 HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY--------------------   60 (240)
T ss_dssp             -CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH--------------------
T ss_pred             CccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHH--------------------
Confidence            356778999999999999999999999999999999999999999999999999999988                    


Q ss_pred             CCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCC
Q psy8898          96 TGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP  175 (1236)
Q Consensus        96 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (1236)
                                 |+++|++++..+..                                                       
T Consensus        61 -----------Ll~~~~~~~~~~~~-------------------------------------------------------   74 (240)
T 3eu9_A           61 -----------YISKGAIVDQLGGD-------------------------------------------------------   74 (240)
T ss_dssp             -----------HHHTTCCTTCCBTT-------------------------------------------------------
T ss_pred             -----------HHHcCCcchhhcCC-------------------------------------------------------
Confidence                       99999887643221                                                       


Q ss_pred             CCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy8898         176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAA  255 (1236)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~  255 (1236)
                                                           .|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+
T Consensus        75 -------------------------------------~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~  117 (240)
T 3eu9_A           75 -------------------------------------LNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAA  117 (240)
T ss_dssp             -------------------------------------TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             -------------------------------------cCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence                                                 1556777777777777777777777777777777777777777


Q ss_pred             HcCcHHHHHHHHhCCCCCCCCCCCCCCc
Q psy8898         256 SKSRLEVCSLLLSEGADPTLHNCHSKSA  283 (1236)
Q Consensus       256 ~~g~~~iv~~Ll~~ga~~~~~~~~g~t~  283 (1236)
                      ..|+.+++++|+++|++++..+..|.||
T Consensus       118 ~~~~~~~~~~Ll~~~~~~~~~~~~g~t~  145 (240)
T 3eu9_A          118 QFGHTSIVAYLIAKGQDVDMMDQNGMTP  145 (240)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             HcCHHHHHHHHHhcCCCccccCCCCCcH
Confidence            7777777777777777777776666665

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.97  E-value=3.8e-31  Score=285.35  Aligned_cols=166  Identities=25%  Similarity=0.295  Sum_probs=114.3

Q ss_pred             CCCcchhhHHhhcCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCC
Q psy8898          22 DGGLHPLHNACSFGHADVVRLLLEADA-NPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPM  100 (1236)
Q Consensus        22 ~~g~t~L~~A~~~g~~~iv~~Ll~~ga-~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~  100 (1236)
                      ..+.||||.||..|+.++|+.|++.+. .++..|..|.||||+|+..|+.+++++                         
T Consensus         4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~-------------------------   58 (231)
T 3aji_A            4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEF-------------------------   58 (231)
T ss_dssp             CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHH-------------------------
T ss_pred             ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHH-------------------------
Confidence            457899999999999999999998765 478889999999999999999999988                         


Q ss_pred             CcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccC
Q psy8898         101 HKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS  180 (1236)
Q Consensus       101 ~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (1236)
                            |+++|++++..+..|+||||+|+..|+.++++.|++......                                
T Consensus        59 ------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--------------------------------  100 (231)
T 3aji_A           59 ------LLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVN--------------------------------  100 (231)
T ss_dssp             ------HHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT--------------------------------
T ss_pred             ------HHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCC--------------------------------
Confidence                  999999999887777666666666665555555554321000                                


Q ss_pred             CCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q psy8898         181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRL  260 (1236)
Q Consensus       181 ~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~  260 (1236)
                                                  .....|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.
T Consensus       101 ----------------------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~  152 (231)
T 3aji_A          101 ----------------------------AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNL  152 (231)
T ss_dssp             ----------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             ----------------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence                                        0001255556666666666666666665555555555556666666666666


Q ss_pred             HHHHHHHhCCCCCCCCCC
Q psy8898         261 EVCSLLLSEGADPTLHNC  278 (1236)
Q Consensus       261 ~iv~~Ll~~ga~~~~~~~  278 (1236)
                      +++++|+++|++++.+|.
T Consensus       153 ~~v~~Ll~~g~~~~~~~~  170 (231)
T 3aji_A          153 KMVHILLFYKASTNIQDT  170 (231)
T ss_dssp             HHHHHHHHTTCCSCCCCT
T ss_pred             HHHHHHHhcCCCccccCC
Confidence            666666655555554443

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.97  E-value=2.3e-30  Score=277.48  Aligned_cols=187  Identities=25%  Similarity=0.290  Sum_probs=168.6

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHH-------HHHHHhcCC-CCcccCCCCCChhhhhcccCc
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGA-DINLKNTDGKTALDLAVPCTR  615 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~-------~~~Ll~~g~-d~~~~~~~g~t~L~~a~~~~~  615 (1236)
                      |+||||+|+..|+.+++++|+++|++++..|..|.||||+|+       +++|++.+. +++..+..|.||||       
T Consensus        25 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~-------   97 (223)
T 2f8y_A           25 GETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI-------   97 (223)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHH-------
T ss_pred             CCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHH-------
Confidence            889999999999999999999999999999999999999887       467777765 66666665555554       


Q ss_pred             ccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccC
Q psy8898         616 AVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSD  695 (1236)
Q Consensus       616 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~  695 (1236)
                                                                                    .|+..|+.+++++|++.+
T Consensus        98 --------------------------------------------------------------~A~~~~~~~~~~~Ll~~g  115 (223)
T 2f8y_A           98 --------------------------------------------------------------LAARLAVEGMLEDLINSH  115 (223)
T ss_dssp             --------------------------------------------------------------HHHHHTCHHHHHHHHHTT
T ss_pred             --------------------------------------------------------------HHHHhCcHHHHHHHHHcC
Confidence                                                                          557789999999999998


Q ss_pred             CcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCC
Q psy8898         696 VVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQ  775 (1236)
Q Consensus       696 ~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~  775 (1236)
                      ......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|++.|+.+++++|+++|++++.+|..|.
T Consensus       116 ~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~  192 (223)
T 2f8y_A          116 ADVNAVDDLGKSALHWAAAV---NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDR  192 (223)
T ss_dssp             CCTTCBCTTSCBHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred             CCCcCcCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCC
Confidence            87777777899999999997   889999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCc
Q psy8898         776 TALHRTARDDKTQAVRVLLSHNADTSI  802 (1236)
Q Consensus       776 tpL~~A~~~~~~~iv~~Ll~~ga~~~~  802 (1236)
                      |||++|++.++.+++++|+++|+..+.
T Consensus       193 t~l~~A~~~~~~~i~~~L~~~g~~~~~  219 (223)
T 2f8y_A          193 LPRDIAQERMHHDIVRLLDEYNLVRSP  219 (223)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred             CHHHHHHHhcchHHHHHHHHcCCCccc
Confidence            999999999999999999999987653

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.97  E-value=2.4e-32  Score=310.18  Aligned_cols=80  Identities=18%  Similarity=0.217  Sum_probs=63.0

Q ss_pred             CCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCC
Q psy8898         695 DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLG  774 (1236)
Q Consensus       695 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G  774 (1236)
                      +......+..|+||||.|+.         +++|+++  ++|.+|..|+||||+|++.|+.++|++|+++|++++.+|..|
T Consensus       248 g~~~~~~~~~g~t~L~~a~~---------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G  316 (327)
T 1sw6_A          248 ESKPNDKNGERKDSILENLD---------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSG  316 (327)
T ss_dssp             ------------CHHHHHCS---------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTS
T ss_pred             cCCcccccccCCChhHHHHH---------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence            44455556679999999984         8899998  688999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHcC
Q psy8898         775 QTALHRTARDD  785 (1236)
Q Consensus       775 ~tpL~~A~~~~  785 (1236)
                      +||||+|+++|
T Consensus       317 ~TpL~~A~~~g  327 (327)
T 1sw6_A          317 LRPVDFGAGLE  327 (327)
T ss_dssp             CCGGGGTCC--
T ss_pred             CCHHHHHHhcC
Confidence            99999998765

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.97  E-value=1.9e-30  Score=279.25  Aligned_cols=211  Identities=25%  Similarity=0.297  Sum_probs=167.6

Q ss_pred             CcchhhHHhhcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCc
Q psy8898          24 GLHPLHNACSFGHADVVRLLLEADANPN-TRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHK  102 (1236)
Q Consensus        24 g~t~L~~A~~~g~~~iv~~Ll~~ga~~n-~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~  102 (1236)
                      |+||||+||..|+.++|++|++.|++++ ..|..|.||||+|+..|+.+++++                           
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------------------   54 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSF---------------------------   54 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHH---------------------------
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHH---------------------------
Confidence            7899999999999999999999998765 489999999999999999999988                           


Q ss_pred             chhHHHhcCCCCCC---cccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCcc
Q psy8898         103 DRSCYLAHGADPFL---KNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQY  179 (1236)
Q Consensus       103 ~v~~Ll~~ga~~~~---~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (1236)
                          |+++|++++.   .+..                                                           
T Consensus        55 ----Ll~~~~~~~~~~~~~~~-----------------------------------------------------------   71 (228)
T 2dzn_A           55 ----LLSKMENVNLDDYPDDS-----------------------------------------------------------   71 (228)
T ss_dssp             ----HHHTCTTCCGGGCCCTT-----------------------------------------------------------
T ss_pred             ----HHhccccccccccCCCC-----------------------------------------------------------
Confidence                9999965543   2222                                                           


Q ss_pred             CCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcC--CCCCCCCCCCCcHHHHHHHc
Q psy8898         180 SGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAG--ANVNAMDLWQFTPLHEAASK  257 (1236)
Q Consensus       180 ~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~g--a~~n~~d~~g~TpL~~A~~~  257 (1236)
                                                        |.||||+|+..|+.+++++|+++|  ++++..+..|.||||+|+..
T Consensus        72 ----------------------------------g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~  117 (228)
T 2dzn_A           72 ----------------------------------GWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGK  117 (228)
T ss_dssp             ----------------------------------SCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHT
T ss_pred             ----------------------------------CCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHc
Confidence                                              667788888888888888888877  77777888888888888888


Q ss_pred             CcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCC
Q psy8898         258 SRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTP  337 (1236)
Q Consensus       258 g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~  337 (1236)
                      |+.+++++|+++|++++.++..|.||                                                      
T Consensus       118 ~~~~~~~~Ll~~g~~~~~~~~~g~t~------------------------------------------------------  143 (228)
T 2dzn_A          118 KWFEVSQFLIENGASVRIKDKFNQIP------------------------------------------------------  143 (228)
T ss_dssp             TCHHHHHHHHHTTCCSCCCCTTSCCH------------------------------------------------------
T ss_pred             CCHhHHHHHHHcCCCccccCCCCCCH------------------------------------------------------
Confidence            88888888888888877776655554                                                      


Q ss_pred             CchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHH
Q psy8898         338 LPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTR  417 (1236)
Q Consensus       338 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~  417 (1236)
                                                                                       ||.|+..|+.+++++
T Consensus       144 -----------------------------------------------------------------L~~A~~~~~~~~v~~  158 (228)
T 2dzn_A          144 -----------------------------------------------------------------LHRAASVGSLKLIEL  158 (228)
T ss_dssp             -----------------------------------------------------------------HHHHHHTTCHHHHHH
T ss_pred             -----------------------------------------------------------------HHHHHHcCCHHHHHH
Confidence                                                                             444556666777777


Q ss_pred             HHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHH-hcCCCCCCCCCCCccCCCChHHHHHhcC
Q psy8898         418 LLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLL-AHGADVHSKDNATDKWGFTPLHEAAQKG  483 (1236)
Q Consensus       418 Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll-~~ga~~~~~~~~~d~~g~t~L~~A~~~~  483 (1236)
                      |++.++.+++..+..|  +||||+|+..|+.+++++|+ ++|++++    .+|..|+|||++|+..+
T Consensus       159 Ll~~g~~~~~~~d~~g--~t~L~~A~~~~~~~~v~~Ll~~~ga~~~----~~~~~g~t~l~~A~~~~  219 (228)
T 2dzn_A          159 LCGLGKSAVNWQDKQG--WTPLFHALAEGHGDAAVLLVEKYGAEYD----LVDNKGAKAEDVALNEQ  219 (228)
T ss_dssp             HHTTTCCCSCCCCTTS--CCHHHHHHHTTCHHHHHHHHHHHCCCSC----CBCTTSCBGGGGCSSTT
T ss_pred             HHhcCcccccCcCCCC--CCHHHHHHHcCCHHHHHHHHHhcCCCCC----ccCCCCCcHHHHHHHHH
Confidence            7776446667666555  49999999999999999999 8899984    45558999999997653

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.97  E-value=1.4e-32  Score=312.10  Aligned_cols=261  Identities=16%  Similarity=0.135  Sum_probs=184.0

Q ss_pred             cHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH-----------------
Q psy8898           3 RKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAA-----------------   65 (1236)
Q Consensus         3 ~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~-----------------   65 (1236)
                      ..|+|++|+++|++++.+|..|.|+++     |+.++|++|+++|++++.      ++++.|+                 
T Consensus        31 ~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~------~~~~~a~~~~~~~~~~~~~~~~~~   99 (327)
T 1sw6_A           31 THDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEI------QEMPTSLNNDSSNRNSEGGSSNQQ   99 (327)
T ss_dssp             CTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC---------------------------------
T ss_pred             cCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCcc------ccchHhhhcccccccccccCCccc
Confidence            457899999999999999999999988     999999999999998765      3444444                 


Q ss_pred             ------HhCCCceEEeeeccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCC-cccCCCCcchhhcccChHHHHH
Q psy8898          66 ------AKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFL-KNQEGQTPLDLTVAEDVRSLLQ  138 (1236)
Q Consensus        66 ------~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~L~~A~~~~~~~~v~  138 (1236)
                            ..+..+++                               ++|++.|++++. +|..|+||||+|+..|+.++|+
T Consensus       100 ~~~~a~~~~~~~~~-------------------------------~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~  148 (327)
T 1sw6_A          100 QQHVSFDSLLQEVN-------------------------------DAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVK  148 (327)
T ss_dssp             ----CHHHHHHHHH-------------------------------HHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHH
T ss_pred             hhHHHHHhhHHHHH-------------------------------HHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHH
Confidence                  33333343                               448999999999 8999999999999999999988


Q ss_pred             HHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CC
Q psy8898         139 DAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LG  214 (1236)
Q Consensus       139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g  214 (1236)
                      .|++..                                                                ++++    .|
T Consensus       149 ~Ll~~G----------------------------------------------------------------ad~n~~d~~g  164 (327)
T 1sw6_A          149 HLVKHG----------------------------------------------------------------SNRLYGDNMG  164 (327)
T ss_dssp             HHHHTT----------------------------------------------------------------CCTTBCCTTC
T ss_pred             HHHHcC----------------------------------------------------------------CCCCCcCCCC
Confidence            888653                                                                2222    58


Q ss_pred             chHHHHHHhcCc---HHHHHHHHhcC-CCCCCCCCCCCcHHHHHHH----cCcHHHHHHHHhCCCCCCCCCCCCCCcccc
Q psy8898         215 LVPLHNACSYGH---FEVTEMLIKAG-ANVNAMDLWQFTPLHEAAS----KSRLEVCSLLLSEGADPTLHNCHSKSAIDV  286 (1236)
Q Consensus       215 ~T~L~~Aa~~g~---~~iv~~Ll~~g-a~~n~~d~~g~TpL~~A~~----~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~  286 (1236)
                      +||||+|+..|+   .++++.|++.+ ++++.+|..|+||||+|+.    .|+.+++++|++.++....           
T Consensus       165 ~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~-----------  233 (327)
T 1sw6_A          165 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIV-----------  233 (327)
T ss_dssp             CCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH-----------
T ss_pred             CCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHh-----------
Confidence            899999999998   78888888886 7799999999999999999    8999999999987432100           


Q ss_pred             ccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhh
Q psy8898         287 APTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVRE  366 (1236)
Q Consensus       287 a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (1236)
                                                         ........                         ..+...+++++.
T Consensus       234 -----------------------------------~~~~~~i~-------------------------~~~~~~g~~~~~  253 (327)
T 1sw6_A          234 -----------------------------------KKQNRPIQ-------------------------SGTNEKESKPND  253 (327)
T ss_dssp             -----------------------------------HGGGCCEE-------------------------EC----------
T ss_pred             -----------------------------------cccchHHH-------------------------hhhhcccCCccc
Confidence                                               00000000                         000112333333


Q ss_pred             hccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcC
Q psy8898         367 HRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYN  446 (1236)
Q Consensus       367 ~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g  446 (1236)
                      .+.    .|+|||+                        .|+.      +++|++.   +++..+..|  +||||+|+..|
T Consensus       254 ~~~----~g~t~L~------------------------~a~~------~~~Ll~~---~~n~~d~~G--~TpLh~A~~~g  294 (327)
T 1sw6_A          254 KNG----ERKDSIL------------------------ENLD------LKWIIAN---MLNAQDSNG--DTCLNIAARLG  294 (327)
T ss_dssp             ----------CHHH------------------------HHCS------HHHHHHH---TTTCCCTTS--CCHHHHHHHHC
T ss_pred             ccc----cCCChhH------------------------HHHH------HHHHHHh---CCCCCCCCC--CCHHHHHHHcC
Confidence            222    2444444                        4433      7788877   466666655  59999999999


Q ss_pred             CHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcC
Q psy8898         447 RVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKG  483 (1236)
Q Consensus       447 ~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~  483 (1236)
                      +.++|++|+++|++++    .+|..|+||||+|+++|
T Consensus       295 ~~~~v~~Ll~~Gad~~----~~d~~G~TpL~~A~~~g  327 (327)
T 1sw6_A          295 NISIVDALLDYGADPF----IANKSGLRPVDFGAGLE  327 (327)
T ss_dssp             CHHHHHHHHHTTCCTT----CCCTTSCCGGGGTCC--
T ss_pred             CHHHHHHHHHcCCCCc----ccCCCCCCHHHHHHhcC
Confidence            9999999999999995    55569999999998764

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.97  E-value=2e-30  Score=278.99  Aligned_cols=203  Identities=27%  Similarity=0.318  Sum_probs=181.6

Q ss_pred             CCcHHHHHHHHHcCCCccc-cCCCCcchhhHHhhcCCHHHHHHHHHCC--CCCCC-CCCCCCCHHHHHHHhCCCceEEee
Q psy8898           1 YGRKDVVEYLLASGASIHA-RDDGGLHPLHNACSFGHADVVRLLLEAD--ANPNT-RDNWNFTPLHEAAAKGKTDVCIGI   76 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~ga~~n~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~g--a~~n~-~d~~g~t~L~~A~~~g~~~iv~~L   76 (1236)
                      +|+.++|++|++.|.+++. +|.+|+||||+|+..|+.++|++|+++|  ++++. .|..|.||||+|+..|+.+++++ 
T Consensus        12 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~-   90 (228)
T 2dzn_A           12 ENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKS-   90 (228)
T ss_dssp             TTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHH-
T ss_pred             hCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHH-
Confidence            5899999999999988664 8999999999999999999999999999  45555 88999999999999999999988 


Q ss_pred             eccccCccccccccccCCCCCCCCCcchhHHHhcC--CCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCC
Q psy8898          77 YFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHG--ADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETA  154 (1236)
Q Consensus        77 l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~g--a~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~  154 (1236)
                                                    |+++|  ++++..+..|.||||+|+..++.++++.|++.....       
T Consensus        91 ------------------------------Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-------  133 (228)
T 2dzn_A           91 ------------------------------LYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-------  133 (228)
T ss_dssp             ------------------------------HHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-------
T ss_pred             ------------------------------HHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-------
Confidence                                          99999  899999999999999999999999999888753110       


Q ss_pred             CCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHH
Q psy8898         155 SVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLI  234 (1236)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll  234 (1236)
                                                                           ......|.||||+|+..|+.+++++|+
T Consensus       134 -----------------------------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll  160 (228)
T 2dzn_A          134 -----------------------------------------------------RIKDKFNQIPLHRAASVGSLKLIELLC  160 (228)
T ss_dssp             -----------------------------------------------------CCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             -----------------------------------------------------cccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence                                                                 001114899999999999999999999


Q ss_pred             hcC-CCCCCCCCCCCcHHHHHHHcCcHHHHHHHH-hCCCCCCCCCCCCCCccccccchhHHH
Q psy8898         235 KAG-ANVNAMDLWQFTPLHEAASKSRLEVCSLLL-SEGADPTLHNCHSKSAIDVAPTRELQQ  294 (1236)
Q Consensus       235 ~~g-a~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll-~~ga~~~~~~~~g~t~l~~a~~~~~~~  294 (1236)
                      +.| ++++.+|..|+||||+|+..|+.+++++|+ ++|++++.+|..|+||+++|...+..+
T Consensus       161 ~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~~~  222 (228)
T 2dzn_A          161 GLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKK  222 (228)
T ss_dssp             TTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTHHH
T ss_pred             hcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHHHH
Confidence            999 999999999999999999999999999999 899999999999999999996654433

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.97  E-value=1.5e-29  Score=255.01  Aligned_cols=159  Identities=31%  Similarity=0.415  Sum_probs=136.1

Q ss_pred             hhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhH
Q psy8898         546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKE  625 (1236)
Q Consensus       546 t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~  625 (1236)
                      ++|+.||+.|+.++|++|+++|+++|.+|..|+||||+|                                         
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a-----------------------------------------   44 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHA-----------------------------------------   44 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH-----------------------------------------
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH-----------------------------------------
Confidence            479999999999999999999998887776665555443                                         


Q ss_pred             HHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCC
Q psy8898         626 ELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTG  705 (1236)
Q Consensus       626 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g  705 (1236)
                                                                            +..++.+++++|++.+......+..|
T Consensus        45 ------------------------------------------------------~~~~~~~~~~~ll~~gad~~~~d~~g   70 (169)
T 4gpm_A           45 ------------------------------------------------------AENGHKEVVKLLISKGADVNAKDSDG   70 (169)
T ss_dssp             ------------------------------------------------------HHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred             ------------------------------------------------------HHcCCHHHHHHHHhcccchhhhccCC
Confidence                                                                  55666777777777777666666678


Q ss_pred             ChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcC
Q psy8898         706 DTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDD  785 (1236)
Q Consensus       706 ~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~  785 (1236)
                      +||||+|+..   ++.++|++|+++|+|+|.+|..|+||||+|++.|+.++|++|+++|++++.+|.+|+||||+|++.|
T Consensus        71 ~TpLh~A~~~---g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g  147 (169)
T 4gpm_A           71 RTPLHHAAEN---GHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHG  147 (169)
T ss_dssp             CCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCHHHHHHHc---CCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence            8888888887   8899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCCCc
Q psy8898         786 KTQAVRVLLSHNADTSI  802 (1236)
Q Consensus       786 ~~~iv~~Ll~~ga~~~~  802 (1236)
                      +.+++++|+++||+++-
T Consensus       148 ~~~iv~~Ll~~GA~ie~  164 (169)
T 4gpm_A          148 NEEVVKLLEKQGGWLEH  164 (169)
T ss_dssp             CHHHHHHHHTC------
T ss_pred             CHHHHHHHHHCCCCcCC
Confidence            99999999999998764

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.96  E-value=9.2e-30  Score=256.54  Aligned_cols=155  Identities=34%  Similarity=0.417  Sum_probs=126.0

Q ss_pred             chhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcchh
Q psy8898          26 HPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRS  105 (1236)
Q Consensus        26 t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~  105 (1236)
                      ++|+.||+.|+.++|++|+++|+|+|.+|..|+||||+|+..++.+++++                              
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~------------------------------   55 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKL------------------------------   55 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH------------------------------
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHH------------------------------
Confidence            36788888888888888888888888888888888888888888888776                              


Q ss_pred             HHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCC
Q psy8898         106 CYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGD  185 (1236)
Q Consensus       106 ~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (1236)
                       |+++|++++.+|..|+||||+|+..|+.++++.|++..                                         
T Consensus        56 -ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-----------------------------------------   93 (169)
T 4gpm_A           56 -LISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG-----------------------------------------   93 (169)
T ss_dssp             -HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----------------------------------------
T ss_pred             -HHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCc-----------------------------------------
Confidence             78888888888888888888888888777777776542                                         


Q ss_pred             cccCCCCCCChhhhHHHhcCcCCcccc----CCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHH
Q psy8898         186 SVSLPPTSPPQPLALETVIMPSGQAVA----LGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLE  261 (1236)
Q Consensus       186 ~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~  261 (1236)
                                             ++++    .|+||||+||..|+.++|++|+++|++++.+|.+|+||||+|+..|+.+
T Consensus        94 -----------------------advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~  150 (169)
T 4gpm_A           94 -----------------------ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEE  150 (169)
T ss_dssp             -----------------------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             -----------------------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence                                   2221    4889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCC
Q psy8898         262 VCSLLLSEGADPTL  275 (1236)
Q Consensus       262 iv~~Ll~~ga~~~~  275 (1236)
                      ++++|+++||+++-
T Consensus       151 iv~~Ll~~GA~ie~  164 (169)
T 4gpm_A          151 VVKLLEKQGGWLEH  164 (169)
T ss_dssp             HHHHHHTC------
T ss_pred             HHHHHHHCCCCcCC
Confidence            99999999999853

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.96  E-value=6.3e-30  Score=276.54  Aligned_cols=217  Identities=21%  Similarity=0.206  Sum_probs=182.4

Q ss_pred             cccCCCCcchhhHHhhcCCHHHHHHHHHCCC----CCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccC
Q psy8898          18 HARDDGGLHPLHNACSFGHADVVRLLLEADA----NPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIG   93 (1236)
Q Consensus        18 n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga----~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~   93 (1236)
                      +.+|.+|+||||+||..|+.++|++|++.++    ++|..|..|+||||+|+..|+.+++++                  
T Consensus         2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~------------------   63 (236)
T 1ikn_D            2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEA------------------   63 (236)
T ss_dssp             -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHC------------------
T ss_pred             CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHH------------------
Confidence            3578999999999999999999999998765    799999999999999999999999998                  


Q ss_pred             CCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCC
Q psy8898          94 GGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSL  173 (1236)
Q Consensus        94 ~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (1236)
                                   |+++|++++.++..|.||||+|+..|+.++++.|++.........                      
T Consensus        64 -------------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----------------------  108 (236)
T 1ikn_D           64 -------------LLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHS----------------------  108 (236)
T ss_dssp             -------------CCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSC----------------------
T ss_pred             -------------HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHH----------------------
Confidence                         999999999999999999999999999999999998642110000                      


Q ss_pred             CCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCC-CCCcHHH
Q psy8898         174 PPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDL-WQFTPLH  252 (1236)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~-~g~TpL~  252 (1236)
                                                      ........|.||||+|+..|+.++|++|+++|++++.++. .|+||||
T Consensus       109 --------------------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~  156 (236)
T 1ikn_D          109 --------------------------------ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH  156 (236)
T ss_dssp             --------------------------------GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred             --------------------------------HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Confidence                                            0001112589999999999999999999999999999997 9999999


Q ss_pred             HHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccC--CC
Q psy8898         253 EAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNF--KH  330 (1236)
Q Consensus       253 ~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~--~~  330 (1236)
                      +|+..|+.++|++|+++|++++.+|..|.|||++|                     +..|+.+++++|++.+....  ..
T Consensus       157 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A---------------------~~~~~~~~~~~Ll~~ga~~~~~~~  215 (236)
T 1ikn_D          157 LAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT---------------------WGRPSTRIQQQLGQLTLENLQMLP  215 (236)
T ss_dssp             HHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGC---------------------TTSSCHHHHHHHHTTSCGGGSSCC
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHH---------------------HccCchHHHHHHHHcchhhhhcCC
Confidence            99999999999999999999999999999997774                     67899999999999987555  33


Q ss_pred             CCCCCCCCch
Q psy8898         331 PYTGDTPLPG  340 (1236)
Q Consensus       331 ~~~~~t~l~~  340 (1236)
                      ...+.++...
T Consensus       216 ~~~~~~~~~~  225 (236)
T 1ikn_D          216 ESEDEESYDT  225 (236)
T ss_dssp             CCCTTTCCCC
T ss_pred             ccchHHHHhh
Confidence            4556676643

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.96  E-value=1.4e-28  Score=265.31  Aligned_cols=206  Identities=20%  Similarity=0.179  Sum_probs=174.8

Q ss_pred             CCcchhhHHhhcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCC
Q psy8898          23 GGLHPLHNACSFGHADVVRLLLEA-DANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH  101 (1236)
Q Consensus        23 ~g~t~L~~A~~~g~~~iv~~Ll~~-ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~  101 (1236)
                      .|+||||+||..|+.++|++|++. |++++..|..|+||||+|+..|+.+++++                          
T Consensus         2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~--------------------------   55 (232)
T 2rfa_A            2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMV--------------------------   55 (232)
T ss_dssp             CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHH--------------------------
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHH--------------------------
Confidence            589999999999999999999998 99999999999999999999999999988                          


Q ss_pred             cchhHHHhcCCCC-----CCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCC
Q psy8898         102 KDRSCYLAHGADP-----FLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPP  176 (1236)
Q Consensus       102 ~~v~~Ll~~ga~~-----~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (1236)
                           |+++|+++     +..|..|.||||+|+..|+.++++.|++............                      
T Consensus        56 -----Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~----------------------  108 (232)
T 2rfa_A           56 -----LMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGS----------------------  108 (232)
T ss_dssp             -----HHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSG----------------------
T ss_pred             -----HHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCc----------------------
Confidence                 99999987     6778899999999999999999999998643221110000                      


Q ss_pred             CccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy8898         177 AQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAAS  256 (1236)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~  256 (1236)
                                        .       +..........|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus       109 ------------------~-------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~  163 (232)
T 2rfa_A          109 ------------------V-------FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILIL  163 (232)
T ss_dssp             ------------------G-------GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred             ------------------c-------eeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence                              0       000111112269999999999999999999999999999999999999999999


Q ss_pred             cCcHHHH----HHHHhCCCCC------CCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccc
Q psy8898         257 KSRLEVC----SLLLSEGADP------TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVV  326 (1236)
Q Consensus       257 ~g~~~iv----~~Ll~~ga~~------~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~  326 (1236)
                      .|+.+++    ++|+++|+++      +.+|..|.||                     |+.|+..|+.+++++|++++..
T Consensus       164 ~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tp---------------------l~~A~~~g~~~~v~~Ll~~g~~  222 (232)
T 2rfa_A          164 QPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTP---------------------FKLAGVEGNIVMFQHLMQKRKH  222 (232)
T ss_dssp             CSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCH---------------------HHHHHHHTCHHHHHHHHHHHHH
T ss_pred             cCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCH---------------------HHHHHHcCCHHHHHHHHhcCcc
Confidence            9999988    9999999998      4778778777                     7778999999999999988654


Q ss_pred             c
Q psy8898         327 N  327 (1236)
Q Consensus       327 ~  327 (1236)
                      .
T Consensus       223 ~  223 (232)
T 2rfa_A          223 I  223 (232)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.96  E-value=7.3e-28  Score=253.25  Aligned_cols=182  Identities=25%  Similarity=0.261  Sum_probs=166.6

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCCC-CCccCCCCCCCHHHHHH-------HHHHHhcCCCCcccCCCCCChhhhhcccCc
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHGA-NVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTR  615 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g~-~v~~~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~  615 (1236)
                      +.|||+.|+..|+.++++.|++.+. +++..|..|.||||+|+       +++|+++|++++..+..|.||||+|     
T Consensus         5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A-----   79 (201)
T 3hra_A            5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYA-----   79 (201)
T ss_dssp             CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH-----
T ss_pred             cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH-----
Confidence            7799999999999999999999876 99999999999999997       5799999999998888777776665     


Q ss_pred             ccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhcc-
Q psy8898         616 AVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTS-  694 (1236)
Q Consensus       616 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~-  694 (1236)
                                                                                      +..|+.+++++|++. 
T Consensus        80 ----------------------------------------------------------------~~~~~~~~~~~Ll~~~   95 (201)
T 3hra_A           80 ----------------------------------------------------------------GAQGRTEILAYMLKHA   95 (201)
T ss_dssp             ----------------------------------------------------------------HHTTCHHHHHHHHHHS
T ss_pred             ----------------------------------------------------------------HHcCCHHHHHHHHhcc
Confidence                                                                            678899999999955 


Q ss_pred             CCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcC-CCCCCCCCCCchHHHHHHHhCC-----HHHHHHHHHCCCCcc
Q psy8898         695 DVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKG-AHLNEKNKELLAPIHLAADLGH-----LDVLDTLLRLGAKVN  768 (1236)
Q Consensus       695 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~g-adin~~d~~G~T~Lh~A~~~g~-----~~iv~~Ll~~ga~~n  768 (1236)
                      +......+..|.||||+|+..   ++.+++++|+++| ++++.+|..|+||||+|+..++     .+++++|+++|++++
T Consensus        96 ~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~  172 (201)
T 3hra_A           96 TPDLNKHNRYGGNALIPAAEK---GHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS  172 (201)
T ss_dssp             CCCTTCCCTTSCCSHHHHHHT---TCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred             CcccccccCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence            445556666799999999997   8999999999998 9999999999999999999998     999999999999999


Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8898         769 LVDVLGQTALHRTARDDKTQAVRVLLSHN  797 (1236)
Q Consensus       769 ~~d~~G~tpL~~A~~~~~~~iv~~Ll~~g  797 (1236)
                      .+|..|+||||+|+..|+.+++++|+++|
T Consensus       173 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          173 IKDNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             CCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             ccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            99999999999999999999999999987

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.95  E-value=2.7e-29  Score=271.57  Aligned_cols=186  Identities=31%  Similarity=0.333  Sum_probs=164.1

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCCC----CCccCCCCCCCHHHHHH-------HHHHHhcCCCCcccCCCCCChhhhhcc
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHGA----NVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVP  612 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g~----~v~~~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~~~~g~t~L~~a~~  612 (1236)
                      |+||||+|+..|+.+++++|++.+.    +++..|..|.||||+|+       +++|+++|++++.+|..|.||||+|  
T Consensus         8 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--   85 (236)
T 1ikn_D            8 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLA--   85 (236)
T ss_dssp             CCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHH--
T ss_pred             CCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--
Confidence            8899999999999999999998765    68888888999998887       5678888888888777777666655  


Q ss_pred             cCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhh
Q psy8898         613 CTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFL  692 (1236)
Q Consensus       613 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll  692 (1236)
                                                                                         +..|+.+++++|+
T Consensus        86 -------------------------------------------------------------------~~~~~~~~v~~Ll   98 (236)
T 1ikn_D           86 -------------------------------------------------------------------CEQGCLASVGVLT   98 (236)
T ss_dssp             -------------------------------------------------------------------HHHTCHHHHHHHH
T ss_pred             -------------------------------------------------------------------HHcCCHHHHHHHH
Confidence                                                                               6778899999999


Q ss_pred             ccCCc------ccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCC-CCchHHHHHHHhCCHHHHHHHHHCCC
Q psy8898         693 TSDVV------NFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNK-ELLAPIHLAADLGHLDVLDTLLRLGA  765 (1236)
Q Consensus       693 ~~~~~------~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~-~G~T~Lh~A~~~g~~~iv~~Ll~~ga  765 (1236)
                      +.+..      ....+..|+||||+|+..   ++.+++++|+++|++++.++. .|+||||+|+..|+.++|++|+++|+
T Consensus        99 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga  175 (236)
T 1ikn_D           99 QSCTTPHLHSILKATNYNGHTCLHLASIH---GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA  175 (236)
T ss_dssp             HSTTTTSSSCGGGCCCTTCCCHHHHHHHT---TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred             hcccchhHHHHhhccCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            88653      344555699999999997   889999999999999999998 99999999999999999999999999


Q ss_pred             CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy8898         766 KVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTS  801 (1236)
Q Consensus       766 ~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~  801 (1236)
                      +++.+|..|+||||+|+..|+.+++++|+++|+++.
T Consensus       176 ~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~  211 (236)
T 1ikn_D          176 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL  211 (236)
T ss_dssp             CSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred             CCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence            999999999999999999999999999999999765

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.95  E-value=6.7e-28  Score=253.56  Aligned_cols=192  Identities=19%  Similarity=0.258  Sum_probs=171.3

Q ss_pred             CCCCcchhhHHhhcCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCC
Q psy8898          21 DDGGLHPLHNACSFGHADVVRLLLEADA-NPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCP   99 (1236)
Q Consensus        21 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga-~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~   99 (1236)
                      +..+.||||.||..|+.++|+.|++.+. +++..|..|.||||+|+..|+.+++++                        
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~------------------------   57 (201)
T 3hra_A            2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKA------------------------   57 (201)
T ss_dssp             -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH------------------------
T ss_pred             CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH------------------------
Confidence            3568899999999999999999999876 999999999999999999999999988                        


Q ss_pred             CCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCcc
Q psy8898         100 MHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQY  179 (1236)
Q Consensus       100 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (1236)
                             |+++|++++..+..|.||||+|+..|+.++++.|++......                               
T Consensus        58 -------Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-------------------------------   99 (201)
T 3hra_A           58 -------LIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDL-------------------------------   99 (201)
T ss_dssp             -------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT-------------------------------
T ss_pred             -------HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCccc-------------------------------
Confidence                   999999999999999999999999999999999996532110                               


Q ss_pred             CCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHcC
Q psy8898         180 SGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAG-ANVNAMDLWQFTPLHEAASKS  258 (1236)
Q Consensus       180 ~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~g-a~~n~~d~~g~TpL~~A~~~g  258 (1236)
                                                  ......|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..+
T Consensus       100 ----------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~  151 (201)
T 3hra_A          100 ----------------------------NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLR  151 (201)
T ss_dssp             ----------------------------TCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSS
T ss_pred             ----------------------------ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhc
Confidence                                        001114889999999999999999999999 999999999999999999998


Q ss_pred             c-----HHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhc
Q psy8898         259 R-----LEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTS  323 (1236)
Q Consensus       259 ~-----~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~  323 (1236)
                      +     .+++++|+++|++++.+|..|.||                     |+.|+..|+.+++++|++.
T Consensus       152 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~---------------------l~~A~~~~~~~~~~~Ll~~  200 (201)
T 3hra_A          152 EGNQLYQDIVKLLMENGADQSIKDNSGRTA---------------------MDYANQKGYTEISKILAQY  200 (201)
T ss_dssp             CCSHHHHHHHHHHHHTTCCTTCCCTTSCCH---------------------HHHHHHHTCHHHHHHHHTC
T ss_pred             cchhhHHHHHHHHHHCCCCCCccCCCCCCH---------------------HHHHHHcCCHhHHHHHHhc
Confidence            8     999999999999999999999888                     6678999999999999865

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.95  E-value=1.9e-28  Score=271.38  Aligned_cols=226  Identities=22%  Similarity=0.257  Sum_probs=168.0

Q ss_pred             CCCchHHHHHHhcCCHHHHHHHHh----cCCCCCCCCCCCccCCCChHHHHHhc---CchHHHhhcCCCCCCCCCchhHH
Q psy8898         433 GRHSTPLHFAAGYNRVAVVEYLLA----HGADVHSKDNATDKWGFTPLHEAAQK---GRTQLSALLPLSPSAANDPLREL  505 (1236)
Q Consensus       433 ~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~~~~~~~~~d~~g~t~L~~A~~~---~~~~iv~~L~~~~~~~~~~~~~L  505 (1236)
                      ..|+||||+|+..|+.++|+.|++    .+++++......|..|+||||+|+..   |+.+++++|++.+....      
T Consensus        11 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~------   84 (273)
T 2pnn_A           11 LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD------   84 (273)
T ss_dssp             CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT------
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc------
Confidence            344688888888888888887776    45555332224566888888888876   88888888854332111      


Q ss_pred             HHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHH
Q psy8898         506 FEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA  585 (1236)
Q Consensus       506 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~  585 (1236)
                                .++.+++....   +.+.         .|+||||+|+..|+.++|++|+++|++++..+..+.       
T Consensus        85 ----------~~~~~i~~~~~---~~d~---------~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~-------  135 (273)
T 2pnn_A           85 ----------SLKQFVNASYT---DSYY---------KGQTALHIAIERRNMTLVTLLVENGADVQAAANGDF-------  135 (273)
T ss_dssp             ----------CHHHHHTCCCC---STTT---------TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGG-------
T ss_pred             ----------chhHHhhcccc---cccC---------CCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccc-------
Confidence                      12222322111   1111         288999999999999999999999999887765430       


Q ss_pred             HHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccc
Q psy8898         586 AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMP  665 (1236)
Q Consensus       586 ~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  665 (1236)
                                             ...                                                      
T Consensus       136 -----------------------~~~------------------------------------------------------  138 (273)
T 2pnn_A          136 -----------------------FKK------------------------------------------------------  138 (273)
T ss_dssp             -----------------------GSS------------------------------------------------------
T ss_pred             -----------------------ccc------------------------------------------------------
Confidence                                   000                                                      


Q ss_pred             cchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHH---cCCCCCCCCCCCc
Q psy8898         666 RIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIR---KGAHLNEKNKELL  742 (1236)
Q Consensus       666 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~---~gadin~~d~~G~  742 (1236)
                                                    ......+..|+||||+|+..   ++.+++++|++   +|++++.+|..|+
T Consensus       139 ------------------------------~~~~~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~gad~~~~d~~g~  185 (273)
T 2pnn_A          139 ------------------------------TKGRPGFYFGELPLSLAACT---NQLAIVKFLLQNSWQPADISARDSVGN  185 (273)
T ss_dssp             ------------------------------CSSSCCCCSCBSHHHHHHHT---TCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred             ------------------------------ccccccccCCCCHHHHHHHc---CCHHHHHHHHhcccCCCCceeeCCCCC
Confidence                                          00011223489999999987   78999999999   9999999999999


Q ss_pred             hHHHHHHHhCC---------HHHHHHHHHCCCCcc-------ccCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CCCcc
Q psy8898         743 APIHLAADLGH---------LDVLDTLLRLGAKVN-------LVDVLGQTALHRTARDDKTQAVRVLLSHNA-DTSIV  803 (1236)
Q Consensus       743 T~Lh~A~~~g~---------~~iv~~Ll~~ga~~n-------~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga-~~~~~  803 (1236)
                      ||||+|++.|+         .+++++|+++|+++|       .+|..|+||||+|+..|+.+++++|+++|| ++...
T Consensus       186 tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~  263 (273)
T 2pnn_A          186 TVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECR  263 (273)
T ss_dssp             CHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-----
T ss_pred             cHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhh
Confidence            99999999998         899999999999997       489999999999999999999999999999 66654

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.95  E-value=6.7e-28  Score=264.23  Aligned_cols=206  Identities=18%  Similarity=0.108  Sum_probs=160.9

Q ss_pred             cchhHHHHHhcCcHH----HHHHHHhCCCCCcc----CCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCc
Q psy8898         544 GLVPLHNACSYGHYE----VTEMLVKHGANVNV----ADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTR  615 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~----iv~~Ll~~g~~v~~----~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~  615 (1236)
                      |+||||.|+..|+.+    ++++|++.|++++.    .|..|+||||+|+..                            
T Consensus         2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~----------------------------   53 (256)
T 2etb_A            2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLN----------------------------   53 (256)
T ss_dssp             CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHT----------------------------
T ss_pred             CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHc----------------------------
Confidence            789999999999997    55666666777766    555555555555421                            


Q ss_pred             ccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccC
Q psy8898         616 AVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSD  695 (1236)
Q Consensus       616 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~  695 (1236)
                       ...++.+++++|...........                   ..+......++..|.||||.|+..|+.+++++|++.+
T Consensus        54 -~~~g~~~~v~~Ll~~g~~~~~~~-------------------~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g  113 (256)
T 2etb_A           54 -LQDGVNACIMPLLQIDKDSGNPK-------------------PLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENG  113 (256)
T ss_dssp             -CBTTBCTTHHHHHHHHHHTTCSS-------------------CGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             -cccchHHHHHHHHhcCCcccchh-------------------hhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcC
Confidence             01145555555544322111000                   0011112234567899999999999999999999998


Q ss_pred             CcccCCCCC-------------CChHHHHHhhCCCCChHHHHHHHHH---cCCCCCCCCCCCchHHHHHHH--hCCHH--
Q psy8898         696 VVNFKHPYT-------------GDTPLHCAVTSPYPKRKAIVESLIR---KGAHLNEKNKELLAPIHLAAD--LGHLD--  755 (1236)
Q Consensus       696 ~~~~~~~~~-------------g~t~L~~A~~~~~~~~~~iv~~Ll~---~gadin~~d~~G~T~Lh~A~~--~g~~~--  755 (1236)
                      ......+..             |+||||+|+..   ++.+++++|++   +|+++|.+|..|+||||+|+.  .++.+  
T Consensus       114 a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~---~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~  190 (256)
T 2etb_A          114 ADVHLRACGRFFQKHQGTCFYFGELPLSLAACT---KQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENS  190 (256)
T ss_dssp             CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT---TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHH
T ss_pred             CCCCcccccccccccccccccCCCCHHHHHHHc---CCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhh
Confidence            876666654             99999999997   89999999999   999999999999999999999  78888  


Q ss_pred             -----HHHHHHHCCCCc-------cccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy8898         756 -----VLDTLLRLGAKV-------NLVDVLGQTALHRTARDDKTQAVRVLLSHNADT  800 (1236)
Q Consensus       756 -----iv~~Ll~~ga~~-------n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~  800 (1236)
                           +|++|+++|+++       +.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus       191 ~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~  247 (256)
T 2etb_A          191 ALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG  247 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence                 999999999999       999999999999999999999999999998644

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.95  E-value=4.4e-28  Score=268.42  Aligned_cols=161  Identities=17%  Similarity=0.161  Sum_probs=126.3

Q ss_pred             cCCCccccCCCCcchhhHHhhcCCHHHHHHHHH----CCCCCC----CCCCCCCCHHHHHHHh---CCCceEEeeecccc
Q psy8898          13 SGASIHARDDGGLHPLHNACSFGHADVVRLLLE----ADANPN----TRDNWNFTPLHEAAAK---GKTDVCIGIYFAEH   81 (1236)
Q Consensus        13 ~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~~n----~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~   81 (1236)
                      .|+..+..|..|+||||.||..|+.++|+.|++    .+++++    ..|..|+||||+|+..   |+.+++++      
T Consensus         2 ~~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~------   75 (273)
T 2pnn_A            2 VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIAL------   75 (273)
T ss_dssp             ---------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHH------
T ss_pred             CcccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHH------
Confidence            567788899999999999999999999998887    566666    4688999999999987   99999988      


Q ss_pred             CccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCc
Q psy8898          82 SSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQ  161 (1236)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~  161 (1236)
                                               |+++|++++..                    +.++....                
T Consensus        76 -------------------------Ll~~ga~~~~~--------------------~~~i~~~~----------------   94 (273)
T 2pnn_A           76 -------------------------LLDVARKTDSL--------------------KQFVNASY----------------   94 (273)
T ss_dssp             -------------------------HHHHHHHTTCH--------------------HHHHTCCC----------------
T ss_pred             -------------------------HHHhhccccch--------------------hHHhhccc----------------
Confidence                                     99998865421                    11111000                


Q ss_pred             ccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCC
Q psy8898         162 YSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVN  241 (1236)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n  241 (1236)
                                                                    ......|+||||+||..|+.++|++|+++|++++
T Consensus        95 ----------------------------------------------~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~  128 (273)
T 2pnn_A           95 ----------------------------------------------TDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ  128 (273)
T ss_dssp             ----------------------------------------------CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             ----------------------------------------------ccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence                                                          0001148899999999999999999999999999


Q ss_pred             CCCC--------------CCCcHHHHHHHcCcHHHHHHHHh---CCCCCCCCCCCCCCcccc
Q psy8898         242 AMDL--------------WQFTPLHEAASKSRLEVCSLLLS---EGADPTLHNCHSKSAIDV  286 (1236)
Q Consensus       242 ~~d~--------------~g~TpL~~A~~~g~~~iv~~Ll~---~ga~~~~~~~~g~t~l~~  286 (1236)
                      ..+.              .|+||||+|+..|+.++|++|++   +|++++.+|..|.||||+
T Consensus       129 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~  190 (273)
T 2pnn_A          129 AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHA  190 (273)
T ss_dssp             CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHH
T ss_pred             ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHH
Confidence            9987              79999999999999999999999   999999999988888444

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.95  E-value=5e-28  Score=265.26  Aligned_cols=204  Identities=18%  Similarity=0.146  Sum_probs=170.5

Q ss_pred             CCcchhhHHhhcCCHH----HHHHHHHCCCCCCC----CCCCCCCHHHHHHHh---CCCceEEeeeccccCccccccccc
Q psy8898          23 GGLHPLHNACSFGHAD----VVRLLLEADANPNT----RDNWNFTPLHEAAAK---GKTDVCIGIYFAEHSSKSNQYVYG   91 (1236)
Q Consensus        23 ~g~t~L~~A~~~g~~~----iv~~Ll~~ga~~n~----~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~   91 (1236)
                      .|+||||.||..|+.+    ++++|++.|++++.    .|..|+||||+|+..   |+.+++++                
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~----------------   64 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMP----------------   64 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHH----------------
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHH----------------
Confidence            4899999999999997    66788889999998    899999999999999   99999988                


Q ss_pred             cCCCCCCCCCcchhHHHhcCCCCCCc-----------ccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q psy8898          92 IGGGTGCPMHKDRSCYLAHGADPFLK-----------NQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPS  160 (1236)
Q Consensus        92 ~~~~~~~~~~~~v~~Ll~~ga~~~~~-----------~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~  160 (1236)
                                     |+++|++++..           |..|.||||+|+..|+.++++.|++............      
T Consensus        65 ---------------Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~------  123 (256)
T 2etb_A           65 ---------------LLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGR------  123 (256)
T ss_dssp             ---------------HHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSG------
T ss_pred             ---------------HHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccc------
Confidence                           89998887633           4789999999999999999999998642211100000      


Q ss_pred             cccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHh---cC
Q psy8898         161 QYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIK---AG  237 (1236)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~---~g  237 (1236)
                                             .                  +-...+.....|.||||+||..|+.++|++|++   +|
T Consensus       124 -----------------------~------------------~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g  162 (256)
T 2etb_A          124 -----------------------F------------------FQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP  162 (256)
T ss_dssp             -----------------------G------------------GSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred             -----------------------c------------------ccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence                                   0                  000111111249999999999999999999999   99


Q ss_pred             CCCCCCCCCCCcHHHHHHH--cCcHH-------HHHHHHhCCCCC-------CCCCCCCCCccccccchhHHHHhhhccC
Q psy8898         238 ANVNAMDLWQFTPLHEAAS--KSRLE-------VCSLLLSEGADP-------TLHNCHSKSAIDVAPTRELQQRLSNEFK  301 (1236)
Q Consensus       238 a~~n~~d~~g~TpL~~A~~--~g~~~-------iv~~Ll~~ga~~-------~~~~~~g~t~l~~a~~~~~~~~~~~~~~  301 (1236)
                      +++|.+|..|+||||+|+.  .++.+       ++++|+++|+++       +.+|..|.||                  
T Consensus       163 a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tp------------------  224 (256)
T 2etb_A          163 ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTP------------------  224 (256)
T ss_dssp             CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCH------------------
T ss_pred             CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCH------------------
Confidence            9999999999999999999  88888       999999999999       8889888888                  


Q ss_pred             cchHHHHHHcCChHHHHHhhhccc
Q psy8898         302 GHCLLEACRQGDPSRVKKFLTSDV  325 (1236)
Q Consensus       302 ~~~l~~A~~~g~~~~v~~ll~~~~  325 (1236)
                         |+.|+..|+.+++++|++.+.
T Consensus       225 ---L~~A~~~g~~~~v~~Ll~~g~  245 (256)
T 2etb_A          225 ---LKLAAKEGKIEIFRHILQREF  245 (256)
T ss_dssp             ---HHHHHHTTCHHHHHHHHHHHH
T ss_pred             ---HHHHHHhCCHHHHHHHHhCCC
Confidence               677899999999999998754

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.94  E-value=9.7e-27  Score=255.68  Aligned_cols=212  Identities=19%  Similarity=0.165  Sum_probs=163.6

Q ss_pred             cchhHHHHHhcCcHHHHHHHHh----CCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCccccc
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVK----HGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLS  619 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~----~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~  619 (1236)
                      ++|+||.|+..|+.++++.|++    .|++++..+..                      .+..|.||||+|+..   ...
T Consensus         5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~----------------------~~~~g~t~L~~A~~~---~~~   59 (260)
T 3jxi_A            5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFR----------------------EPSTGKTCLPKALLN---LSA   59 (260)
T ss_dssp             CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGS----------------------CTTTCCCHHHHHHTS---CBT
T ss_pred             hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhh----------------------ccCCCCcHHHHHHHH---hhc
Confidence            7899999999999996555554    67766654411                      124455555555310   134


Q ss_pred             CCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCccc
Q psy8898         620 GDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNF  699 (1236)
Q Consensus       620 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~  699 (1236)
                      ++.+++++|...........                   .......+..+..|.||||+||..|+.++|++|++.+....
T Consensus        60 g~~~~v~~Ll~~g~~~~~~~-------------------~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~  120 (260)
T 3jxi_A           60 GRNDTIPILLDIAEKTGNMR-------------------EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH  120 (260)
T ss_dssp             TBCTHHHHHHHHHHHTTCHH-------------------HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             CCHHHHHHHHHhcccccchH-------------------hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC
Confidence            56666666655322111100                   00112234455689999999999999999999999988766


Q ss_pred             CCC--------------CCCChHHHHHhhCCCCChHHHHHHHHH---cCCCCCCCCCCCchHHHHHHHhCC---------
Q psy8898         700 KHP--------------YTGDTPLHCAVTSPYPKRKAIVESLIR---KGAHLNEKNKELLAPIHLAADLGH---------  753 (1236)
Q Consensus       700 ~~~--------------~~g~t~L~~A~~~~~~~~~~iv~~Ll~---~gadin~~d~~G~T~Lh~A~~~g~---------  753 (1236)
                      ..+              ..|+||||+|+..   ++.+++++|++   +|+++|.+|..|+||||+|++.|+         
T Consensus       121 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~  197 (260)
T 3jxi_A          121 AQARGRFFQPKDEGGYFYFGELPLSLAACT---NQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFV  197 (260)
T ss_dssp             CCCEECCCSSSCCCCSCCSCSSHHHHHHHT---TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHH
T ss_pred             ccccccccCcccccccccCCCCHHHHHHHc---CCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHH
Confidence            665              4699999999997   89999999999   999999999999999999999988         


Q ss_pred             HHHHHHHHHCCCCc-------cccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q psy8898         754 LDVLDTLLRLGAKV-------NLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSI  802 (1236)
Q Consensus       754 ~~iv~~Ll~~ga~~-------n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~  802 (1236)
                      .+++++|+++|+++       +.+|..|+||||+|+..|+.+++++|+++|+++..
T Consensus       198 ~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~  253 (260)
T 3jxi_A          198 TKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA  253 (260)
T ss_dssp             HHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence            79999999999999       77999999999999999999999999999965543

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.93  E-value=6.2e-27  Score=258.53  Aligned_cols=187  Identities=23%  Similarity=0.263  Sum_probs=170.9

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCCCC--CccCCCCCCCHHHHHH-------HHHHHhcCC-CCcccCCCCCChhhhhccc
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHGAN--VNVADLWKFTPLHEAA-------AKALLQHGA-DINLKNTDGKTALDLAVPC  613 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g~~--v~~~d~~g~tpL~~a~-------~~~Ll~~g~-d~~~~~~~g~t~L~~a~~~  613 (1236)
                      +++++|.|+..++.+.++.+++.+.+  +|..|..|+||||+|+       +++|++.|+ +++..|..|.||||+|+..
T Consensus        76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~  155 (276)
T 4hbd_A           76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA  155 (276)
T ss_dssp             HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence            66889999999999999999988766  8999999999999998       679999998 9999999999999998611


Q ss_pred             CcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhc
Q psy8898         614 TRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLT  693 (1236)
Q Consensus       614 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~  693 (1236)
                                                                                      .+...++.+++++|++
T Consensus       156 ----------------------------------------------------------------~~~~~~~~~~v~~Ll~  171 (276)
T 4hbd_A          156 ----------------------------------------------------------------TLKTQDDIETVLQLFR  171 (276)
T ss_dssp             ----------------------------------------------------------------CCCSHHHHHHHHHHHH
T ss_pred             ----------------------------------------------------------------HhhhhhhHHHHHHHHH
Confidence                                                                            0113466789999999


Q ss_pred             cCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHH-CCCCccccCC
Q psy8898         694 SDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLR-LGAKVNLVDV  772 (1236)
Q Consensus       694 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~-~ga~~n~~d~  772 (1236)
                      .+......+..|+||||+|+..   ++.+++++|+++|+|+|.+|..|+||||+|+..|+.++|++|++ .|++++.+|.
T Consensus       172 ~g~~~~~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~  248 (276)
T 4hbd_A          172 LGNINAKASQAGQTALMLAVSH---GRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDR  248 (276)
T ss_dssp             HSCTTCCCTTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCT
T ss_pred             cCCCccccCCCCCCHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCC
Confidence            9988888788899999999997   89999999999999999999999999999999999999999999 8999999999


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8898         773 LGQTALHRTARDDKTQAVRVLLSHN  797 (1236)
Q Consensus       773 ~G~tpL~~A~~~~~~~iv~~Ll~~g  797 (1236)
                      .|+||||+|+..|+.+++++|++++
T Consensus       249 ~g~TpL~~A~~~g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          249 DGSTALMVALDAGQSEIASMLYSRM  273 (276)
T ss_dssp             TSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            9999999999999999999999875

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.93  E-value=1.4e-28  Score=280.64  Aligned_cols=310  Identities=13%  Similarity=0.075  Sum_probs=194.9

Q ss_pred             hhhHHHhcCcCCcccc--CCchHHHHHHh-cCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy8898         197 PLALETVIMPSGQAVA--LGLVPLHNACS-YGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP  273 (1236)
Q Consensus       197 ~~~~~~~Ll~~g~~~~--~g~T~L~~Aa~-~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~  273 (1236)
                      ...++..+++...+.+  .+.+++++|+. .++.+++++|++.|++.       +||||+|+..|+.++|++|+++|+..
T Consensus        46 ~~~~~~~~~~~~~~~~~~~~ll~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~  118 (376)
T 2aja_A           46 YKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSD  118 (376)
T ss_dssp             HHHHHHHCCCCSSHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CC
T ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcH
Confidence            3456777777776666  57788998887 57889999999887653       49999999999999999999988732


Q ss_pred             CCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhH
Q psy8898         274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEF  353 (1236)
Q Consensus       274 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~  353 (1236)
                      ...+.                                                                           
T Consensus       119 ~~~~~---------------------------------------------------------------------------  123 (376)
T 2aja_A          119 EIVKV---------------------------------------------------------------------------  123 (376)
T ss_dssp             SSCC----------------------------------------------------------------------------
T ss_pred             HHHHH---------------------------------------------------------------------------
Confidence            11100                                                                           


Q ss_pred             HHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCc---ccccC
Q psy8898         354 ITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHI---VNCRD  430 (1236)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~  430 (1236)
                                                               ....+.+||+.|+..|+.++|++|++.+ .+   .+..+
T Consensus       124 -----------------------------------------~~~~~~tpL~~Aa~~G~~eiv~~Ll~~g-ad~~~~~i~~  161 (376)
T 2aja_A          124 -----------------------------------------IQAENYQAFRLAAENGHLHVLNRLCELA-PTEIMAMIQA  161 (376)
T ss_dssp             ------------------------------------------CHHHHHHHHHHHHTTCHHHHHHHHHSC-TTTHHHHHSH
T ss_pred             -----------------------------------------hccCCCCHHHHHHHcCCHHHHHHHHhCC-CCccccccCC
Confidence                                                     0012345678888888888888888873 32   12222


Q ss_pred             CCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHH-hcCchHHHhhcCCCCCCCCCchhHHHHHH
Q psy8898         431 LDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAA-QKGRTQLSALLPLSPSAANDPLRELFEAC  509 (1236)
Q Consensus       431 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~-~~~~~~iv~~L~~~~~~~~~~~~~L~~A~  509 (1236)
                      .+   +||||+|+..|+.++|++|+++|++++.  ...|..|.||||+|+ .+|+.+++++|++.+.             
T Consensus       162 ~~---~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~--~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------------  223 (376)
T 2aja_A          162 EN---YHAFRLAAENGHLHVLNRLCELAPTEAT--AMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------------  223 (376)
T ss_dssp             HH---HHHHHHHHHTTCHHHHHHHHHSCGGGHH--HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------------
T ss_pred             CC---CCHHHHHHHCCCHHHHHHHHHcCCccch--hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------------
Confidence            22   5999999999999999999999998742  014557889999998 8888888888755210             


Q ss_pred             hcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHH
Q psy8898         510 KGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKAL  589 (1236)
Q Consensus       510 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~L  589 (1236)
                                                       .|.|||++|+..|+.+++++|+++|++++..+               
T Consensus       224 ---------------------------------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~---------------  255 (376)
T 2aja_A          224 ---------------------------------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH---------------  255 (376)
T ss_dssp             ---------------------------------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH---------------
T ss_pred             ---------------------------------ccchHHHHHHHCCCHHHHHHHHhcCccccccc---------------
Confidence                                             26789999999999999999999887664332               


Q ss_pred             HhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchh
Q psy8898         590 LQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKD  669 (1236)
Q Consensus       590 l~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  669 (1236)
                                     ++++.|+      ..|+.++++....                                       
T Consensus       256 ---------------~~l~~A~------~~g~~~vv~~~~~---------------------------------------  275 (376)
T 2aja_A          256 ---------------DAFKLSN------PDGVFDLVTKSEC---------------------------------------  275 (376)
T ss_dssp             ---------------TTTTTTS------SSSCCCCSSHHHH---------------------------------------
T ss_pred             ---------------HHHHHHH------HCCChhhhcHHhh---------------------------------------
Confidence                           2444443      2333332211100                                       


Q ss_pred             hccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHH---------cCCCCCCCCCC
Q psy8898         670 EFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIR---------KGAHLNEKNKE  740 (1236)
Q Consensus       670 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~---------~gadin~~d~~  740 (1236)
                          ..        ...+++.|+..+.                     .+..+.+++|++         .|+++|    .
T Consensus       276 ----~~--------~~~~~~~li~~~~---------------------~~~~~~~~~Ll~~~~vk~l~~~g~~~n----~  318 (376)
T 2aja_A          276 ----LQ--------GFYMLRNLIRRND---------------------EVLLDDIRFLLSIPGIKALAPTATIPG----D  318 (376)
T ss_dssp             ----HH--------HHHHHHHHHHHCC---------------------GGGHHHHHHHHTSTTTGGGSSCCSSTT----C
T ss_pred             ----hh--------hHHHHHHHHHcch---------------------hhHHHHHHHHHhChhhhhhhccCCCCC----C
Confidence                00        0012333333321                     023555666654         455554    4


Q ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8898         741 LLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSH  796 (1236)
Q Consensus       741 G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~  796 (1236)
                      +.||||+|++.|+.++|++|++.|   ...|..|.||+.+|-..|+.+++++-+.+
T Consensus       319 ~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (376)
T 2aja_A          319 ANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINETGGRLDLRAVALEH  371 (376)
T ss_dssp             CCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC----------------------
T ss_pred             ccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhccccccccccccHHHHHHHH
Confidence            569999999999999999999875   56788999999999999999998876554

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.93  E-value=1.4e-26  Score=241.14  Aligned_cols=164  Identities=23%  Similarity=0.249  Sum_probs=149.9

Q ss_pred             CccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCC
Q psy8898          16 SIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGG   95 (1236)
Q Consensus        16 ~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~   95 (1236)
                      .+|.+|..|+||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++                    
T Consensus        27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~--------------------   86 (192)
T 2rfm_A           27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEK--------------------   86 (192)
T ss_dssp             HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHH--------------------
T ss_pred             HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHH--------------------
Confidence            467789999999999999999999999999999999999999999999999999999988                    


Q ss_pred             CCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCC
Q psy8898          96 TGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP  175 (1236)
Q Consensus        96 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (1236)
                                 |+++|++++..+..|.||||+|+..++.++++.|++.....                            
T Consensus        87 -----------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------------------------  127 (192)
T 2rfm_A           87 -----------LLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV----------------------------  127 (192)
T ss_dssp             -----------HHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS----------------------------
T ss_pred             -----------HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC----------------------------
Confidence                       99999999999999999999999999999999888753110                            


Q ss_pred             CCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy8898         176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAA  255 (1236)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~  255 (1236)
                                                      ......|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus       128 --------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~  175 (192)
T 2rfm_A          128 --------------------------------NDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASAR  175 (192)
T ss_dssp             --------------------------------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred             --------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence                                            001114899999999999999999999999999999999999999999


Q ss_pred             HcCcHHHHHHHHhCC
Q psy8898         256 SKSRLEVCSLLLSEG  270 (1236)
Q Consensus       256 ~~g~~~iv~~Ll~~g  270 (1236)
                      ..|+.+++++|+++|
T Consensus       176 ~~~~~~~v~~Ll~~~  190 (192)
T 2rfm_A          176 IFGRQEVIKIFTEVR  190 (192)
T ss_dssp             HTTCHHHHHHHHHHH
T ss_pred             HhCcHHHHHHHHhcc
Confidence            999999999999864

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.93  E-value=6.4e-29  Score=283.34  Aligned_cols=279  Identities=13%  Similarity=0.022  Sum_probs=178.0

Q ss_pred             CcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHhCCCceEEeeec
Q psy8898           2 GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANP---NTRDNWNFTPLHEAAAKGKTDVCIGIYF   78 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~---n~~d~~g~t~L~~A~~~g~~~iv~~Ll~   78 (1236)
                      ++.+++++|+++|++.       +||||+||+.|+.++|++|+++|+..   +..+..|.||||+|+.+|+.++|++   
T Consensus        77 ~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~---  146 (376)
T 2aja_A           77 NAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNR---  146 (376)
T ss_dssp             TCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHH---
T ss_pred             CCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHH---
Confidence            5667788888877654       59999999999999999999999832   3445568899999999999999988   


Q ss_pred             cccCccccccccccCCCCCCCCCcchhHHHhcCCCC---CCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCC
Q psy8898          79 AEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADP---FLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETAS  155 (1236)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~---~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~  155 (1236)
                                                  |+++|+++   +..+.+ +||||+|+..|+.++|+.|++.            
T Consensus       147 ----------------------------Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~------------  185 (376)
T 2aja_A          147 ----------------------------LCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCEL------------  185 (376)
T ss_dssp             ----------------------------HHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHS------------
T ss_pred             ----------------------------HHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHc------------
Confidence                                        99999863   333334 8999999999999998888764            


Q ss_pred             CCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcc-----cc-CCchHHHHHH-hcCcHH
Q psy8898         156 VPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQA-----VA-LGLVPLHNAC-SYGHFE  228 (1236)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~-----~~-~g~T~L~~Aa-~~g~~~  228 (1236)
                                                                          |++     .+ .|.||||+|| ..|+.+
T Consensus       186 ----------------------------------------------------ga~~~~~~~d~~g~TpL~~Aa~~~G~~e  213 (376)
T 2aja_A          186 ----------------------------------------------------APTEATAMIQAENYYAFRWAAVGRGHHN  213 (376)
T ss_dssp             ----------------------------------------------------CGGGHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred             ----------------------------------------------------CCccchhccCCCCCCHHHHHHHHCCCHH
Confidence                                                                333     11 4889999999 999999


Q ss_pred             HHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHH
Q psy8898         229 VTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEA  308 (1236)
Q Consensus       229 iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A  308 (1236)
                      +|++|++.|+       .|.||||+|+..|+.+++++|+++|++++..+.    +                     +..|
T Consensus       214 iv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~----~---------------------l~~A  261 (376)
T 2aja_A          214 VINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD----A---------------------FKLS  261 (376)
T ss_dssp             HHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT----T---------------------TTTT
T ss_pred             HHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCcccccccH----H---------------------HHHH
Confidence            9999999774       278999999999999999999999887654332    2                     3445


Q ss_pred             HHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhh
Q psy8898         309 CRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKK  388 (1236)
Q Consensus       309 ~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~  388 (1236)
                      +..|+.+++...-....                         ...+.                                 
T Consensus       262 ~~~g~~~vv~~~~~~~~-------------------------~~~~~---------------------------------  283 (376)
T 2aja_A          262 NPDGVFDLVTKSECLQG-------------------------FYMLR---------------------------------  283 (376)
T ss_dssp             SSSSCCCCSSHHHHHHH-------------------------HHHHH---------------------------------
T ss_pred             HHCCChhhhcHHhhhhh-------------------------HHHHH---------------------------------
Confidence            55666554421100000                         00000                                 


Q ss_pred             hhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccc--cCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCC
Q psy8898         389 LLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNC--RDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDN  466 (1236)
Q Consensus       389 ~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~  466 (1236)
                                   .|..+...+..+.+++|++........  ....+.+.||||+|+..|+.++|++|++.|       .
T Consensus       284 -------------~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~-------~  343 (376)
T 2aja_A          284 -------------NLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP-------S  343 (376)
T ss_dssp             -------------HHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH-------H
T ss_pred             -------------HHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh-------H
Confidence                         011111223466677777642211110  011122358999999999999999999976       3


Q ss_pred             CCccCCCChHHHHHhcCchHHHhhcCC
Q psy8898         467 ATDKWGFTPLHEAAQKGRTQLSALLPL  493 (1236)
Q Consensus       467 ~~d~~g~t~L~~A~~~~~~~iv~~L~~  493 (1236)
                      ..+..++|++.+|-.+|+.++++.-.+
T Consensus       344 v~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (376)
T 2aja_A          344 VLALTKANNYYINETGGRLDLRAVALE  370 (376)
T ss_dssp             HHHSCC---------------------
T ss_pred             HHHHHHHhccccccccccccHHHHHHH
Confidence            445578899999999999998877643

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.93  E-value=4e-25  Score=224.69  Aligned_cols=157  Identities=31%  Similarity=0.397  Sum_probs=140.3

Q ss_pred             ccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCc
Q psy8898         543 AGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDH  622 (1236)
Q Consensus       543 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~  622 (1236)
                      .+.|+|+.|+..|+.+++++|+++|++++..|..|.||                                          
T Consensus        13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~------------------------------------------   50 (169)
T 2y1l_E           13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTP------------------------------------------   50 (169)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH------------------------------------------
T ss_pred             cccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH------------------------------------------
Confidence            37899999999999999999999998877665444433                                          


Q ss_pred             hhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCC
Q psy8898         623 KKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHP  702 (1236)
Q Consensus       623 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~  702 (1236)
                                                                           ||.|+..|+.+++++|++.+......+
T Consensus        51 -----------------------------------------------------L~~A~~~~~~~~v~~Ll~~g~~~~~~~   77 (169)
T 2y1l_E           51 -----------------------------------------------------LHLAAFNGHLEIVEVLLKNGADVNAVD   77 (169)
T ss_dssp             -----------------------------------------------------HHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred             -----------------------------------------------------HHHHHHcCCHHHHHHHHHcCCCCCccC
Confidence                                                                 334466788889999998887777777


Q ss_pred             CCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHH
Q psy8898         703 YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTA  782 (1236)
Q Consensus       703 ~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~  782 (1236)
                      ..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|++.|+.++|++|+++|++++.+|..|.|||++|+
T Consensus        78 ~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~  154 (169)
T 2y1l_E           78 HAGMTPLRLAALF---GHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISI  154 (169)
T ss_dssp             TTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence            7799999999997   8899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCC
Q psy8898         783 RDDKTQAVRVLLSHN  797 (1236)
Q Consensus       783 ~~~~~~iv~~Ll~~g  797 (1236)
                      ..|+.+++++|+++|
T Consensus       155 ~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E          155 DNGNEDLAEILQKLN  169 (169)
T ss_dssp             HTTCHHHHHHHHTC-
T ss_pred             HhCCHHHHHHHHHcC
Confidence            999999999999986

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.93  E-value=2.8e-26  Score=234.24  Aligned_cols=169  Identities=21%  Similarity=0.212  Sum_probs=145.4

Q ss_pred             CcchhhHHhhcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCc
Q psy8898          24 GLHPLHNACSFGHADVVRLLLEADAN-PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHK  102 (1236)
Q Consensus        24 g~t~L~~A~~~g~~~iv~~Ll~~ga~-~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~  102 (1236)
                      +.||||.||..|+.++|+.|++.|.+ ++..|..|+||||+|+..|+.+++++                           
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------------------   54 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRF---------------------------   54 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHH---------------------------
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHH---------------------------
Confidence            56899999999999999999999987 89999999999999999999999988                           


Q ss_pred             chhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCC
Q psy8898         103 DRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGS  182 (1236)
Q Consensus       103 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (1236)
                          |+++|++++..+..|.||||+|+..++.++++.|++.....                                   
T Consensus        55 ----Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------------------------   95 (172)
T 3v30_A           55 ----LLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDI-----------------------------------   95 (172)
T ss_dssp             ----HHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-----------------------------------
T ss_pred             ----HHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCC-----------------------------------
Confidence                99999999999999999999999999999999888642110                                   


Q ss_pred             CCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy8898         183 GGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEV  262 (1236)
Q Consensus       183 ~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~i  262 (1236)
                                               ......|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.++
T Consensus        96 -------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~  150 (172)
T 3v30_A           96 -------------------------NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKV  150 (172)
T ss_dssp             -------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             -------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHH
Confidence                                     0011148999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCCc
Q psy8898         263 CSLLLSEGADPTLHNCHSKSA  283 (1236)
Q Consensus       263 v~~Ll~~ga~~~~~~~~g~t~  283 (1236)
                      +++|+++|+++...+..+.||
T Consensus       151 ~~~L~~~~~~~~~~~~~~~~p  171 (172)
T 3v30_A          151 QQVIENHILKLFQSNLVPADP  171 (172)
T ss_dssp             HHHHHHHHHHHSCC-------
T ss_pred             HHHHHHHHHHHhcccCCCCCC
Confidence            999999999998888887776

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.93  E-value=1.8e-25  Score=225.70  Aligned_cols=157  Identities=25%  Similarity=0.299  Sum_probs=137.7

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCch
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHK  623 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~  623 (1236)
                      ..|||+.|+..|+.+++++|+++|++++..|..                          |+||||+|             
T Consensus         5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--------------------------g~t~L~~A-------------   45 (162)
T 1ihb_A            5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGF--------------------------GRTALQVM-------------   45 (162)
T ss_dssp             CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTT--------------------------SCCHHHHC-------------
T ss_pred             HhhHHHHHHHcCCHHHHHHHHhCCCCccccCcc--------------------------CccHHHHH-------------
Confidence            568999999999999999999988877665544                          44444444             


Q ss_pred             hHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCC
Q psy8898         624 KEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPY  703 (1236)
Q Consensus       624 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  703 (1236)
                                                                              +. |+.+++++|++.+......+.
T Consensus        46 --------------------------------------------------------~~-~~~~~v~~Ll~~g~~~~~~~~   68 (162)
T 1ihb_A           46 --------------------------------------------------------KL-GNPEIARRLLLRGANPDLKDR   68 (162)
T ss_dssp             --------------------------------------------------------CS-SCHHHHHHHHHTTCCTTCCCT
T ss_pred             --------------------------------------------------------Hc-CcHHHHHHHHHcCCCCCCCCC
Confidence                                                                    34 777888888888877777777


Q ss_pred             CCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCC-ccccCCCCCcHHHHHH
Q psy8898         704 TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAK-VNLVDVLGQTALHRTA  782 (1236)
Q Consensus       704 ~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~-~n~~d~~G~tpL~~A~  782 (1236)
                      .|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|++.|+.+++++|+++|++ ++.+|..|.||||+|+
T Consensus        69 ~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~  145 (162)
T 1ihb_A           69 TGFAVIHDAARA---GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLAR  145 (162)
T ss_dssp             TSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH
T ss_pred             CCCCHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHH
Confidence            799999999987   789999999999999999999999999999999999999999999998 6999999999999999


Q ss_pred             HcCCHHHHHHHHhCCCC
Q psy8898         783 RDDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       783 ~~~~~~iv~~Ll~~ga~  799 (1236)
                      ..|+.+++++|+++||+
T Consensus       146 ~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A          146 LYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             HTTCHHHHHHHHHTC--
T ss_pred             HcCCHHHHHHHHHhCCC
Confidence            99999999999999986

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.93  E-value=1.9e-26  Score=253.43  Aligned_cols=208  Identities=19%  Similarity=0.171  Sum_probs=168.1

Q ss_pred             CCCCcchhhHHhhcCCHHHH----HHHHHCCCCCCCCC----CCCCCHHHHHH---HhCCCceEEeeeccccCccccccc
Q psy8898          21 DDGGLHPLHNACSFGHADVV----RLLLEADANPNTRD----NWNFTPLHEAA---AKGKTDVCIGIYFAEHSSKSNQYV   89 (1236)
Q Consensus        21 d~~g~t~L~~A~~~g~~~iv----~~Ll~~ga~~n~~d----~~g~t~L~~A~---~~g~~~iv~~Ll~~~~~~~~~~~~   89 (1236)
                      +..|+||||.||+.|+.+.|    ++|++.|++++..+    ..|+||||+|+   ..|+.+++++              
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~--------------   67 (260)
T 3jxi_A            2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPI--------------   67 (260)
T ss_dssp             CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHH--------------
T ss_pred             ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHH--------------
Confidence            45789999999999999954    45555999999766    77999999999   7799999988              


Q ss_pred             cccCCCCCCCCCcchhHHHhcCCC-----------CCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCC
Q psy8898          90 YGIGGGTGCPMHKDRSCYLAHGAD-----------PFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPP  158 (1236)
Q Consensus        90 ~~~~~~~~~~~~~~v~~Ll~~ga~-----------~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~  158 (1236)
                                       |+++|++           ++..|..|+||||+|+..|+.++|+.|++............ ...
T Consensus        68 -----------------Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~-~~~  129 (260)
T 3jxi_A           68 -----------------LLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR-FFQ  129 (260)
T ss_dssp             -----------------HHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEEC-CCS
T ss_pred             -----------------HHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccc-ccC
Confidence                             8887744           45566699999999999999999999998642211111000 000


Q ss_pred             CCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHh---
Q psy8898         159 PSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIK---  235 (1236)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~---  235 (1236)
                      +                                             .+.+.....|.||||+|+..|+.++|++|++   
T Consensus       130 ~---------------------------------------------~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~  164 (260)
T 3jxi_A          130 P---------------------------------------------KDEGGYFYFGELPLSLAACTNQPHIVHYLTENGH  164 (260)
T ss_dssp             S---------------------------------------------SCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred             c---------------------------------------------ccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence            0                                             0111222359999999999999999999999   


Q ss_pred             cCCCCCCCCCCCCcHHHHHHHcCc---------HHHHHHHHhCCCCC-------CCCCCCCCCccccccchhHHHHhhhc
Q psy8898         236 AGANVNAMDLWQFTPLHEAASKSR---------LEVCSLLLSEGADP-------TLHNCHSKSAIDVAPTRELQQRLSNE  299 (1236)
Q Consensus       236 ~ga~~n~~d~~g~TpL~~A~~~g~---------~~iv~~Ll~~ga~~-------~~~~~~g~t~l~~a~~~~~~~~~~~~  299 (1236)
                      .|+++|.+|..|+||||+|+..++         .+++++|+++|+++       +..|..|.||                
T Consensus       165 ~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tp----------------  228 (260)
T 3jxi_A          165 KQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSP----------------  228 (260)
T ss_dssp             CCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCH----------------
T ss_pred             cCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCH----------------
Confidence            999999999999999999998887         79999999999998       6688888888                


Q ss_pred             cCcchHHHHHHcCChHHHHHhhhcccc
Q psy8898         300 FKGHCLLEACRQGDPSRVKKFLTSDVV  326 (1236)
Q Consensus       300 ~~~~~l~~A~~~g~~~~v~~ll~~~~~  326 (1236)
                           |+.|+..|+.+++++|++++..
T Consensus       229 -----L~~A~~~g~~~~v~~Ll~~g~~  250 (260)
T 3jxi_A          229 -----LMMAAKTGKIGIFQHIIRREIA  250 (260)
T ss_dssp             -----HHHHHHTTCHHHHHHHHHHHHH
T ss_pred             -----HHHHHHcCCHHHHHHHHHhCCC
Confidence                 6778999999999999987653

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.92  E-value=8.3e-26  Score=249.51  Aligned_cols=190  Identities=22%  Similarity=0.185  Sum_probs=169.3

Q ss_pred             CcchhhHHhhcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCC
Q psy8898          24 GLHPLHNACSFGHADVVRLLLEADAN--PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH  101 (1236)
Q Consensus        24 g~t~L~~A~~~g~~~iv~~Ll~~ga~--~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~  101 (1236)
                      +++++|.|+..|+.+.++.|++.+.+  +|..|..|+||||+|+..|+.+++++                          
T Consensus        76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~--------------------------  129 (276)
T 4hbd_A           76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQ--------------------------  129 (276)
T ss_dssp             HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHH--------------------------
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHH--------------------------
Confidence            57899999999999999999988776  89999999999999999999999988                          


Q ss_pred             cchhHHHhcCC-CCCCcccCCCCcchhhc-----ccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCC
Q psy8898         102 KDRSCYLAHGA-DPFLKNQEGQTPLDLTV-----AEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP  175 (1236)
Q Consensus       102 ~~v~~Ll~~ga-~~~~~~~~g~t~L~~A~-----~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (1236)
                           |+++|+ +++..+..|.||||+|+     ..++.++++.+++.....                            
T Consensus       130 -----Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~----------------------------  176 (276)
T 4hbd_A          130 -----LLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN----------------------------  176 (276)
T ss_dssp             -----HHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT----------------------------
T ss_pred             -----HHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc----------------------------
Confidence                 999998 99999999999999999     668888888887653110                            


Q ss_pred             CCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy8898         176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAA  255 (1236)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~  255 (1236)
                                                      ......|+||||+||..|+.++|++|+++|+++|.+|.+|+||||+|+
T Consensus       177 --------------------------------~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~  224 (276)
T 4hbd_A          177 --------------------------------AKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCAC  224 (276)
T ss_dssp             --------------------------------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             --------------------------------cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Confidence                                            000114899999999999999999999999999999999999999999


Q ss_pred             HcCcHHHHHHHHh-CCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhccc
Q psy8898         256 SKSRLEVCSLLLS-EGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV  325 (1236)
Q Consensus       256 ~~g~~~iv~~Ll~-~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~  325 (1236)
                      ..|+.++|++|++ .|++++.+|..|.||                     |+.|+..|+.+++++|+++..
T Consensus       225 ~~g~~~iv~~Ll~~~gad~~~~d~~g~Tp---------------------L~~A~~~g~~~iv~~Ll~~~~  274 (276)
T 4hbd_A          225 EHGHKEIAGLLLAVPSCDISLTDRDGSTA---------------------LMVALDAGQSEIASMLYSRMN  274 (276)
T ss_dssp             HHTCHHHHHHHHTSTTCCTTCCCTTSCCH---------------------HHHHHHHTCHHHHHHHHHHCC
T ss_pred             HCCCHHHHHHHHhcCCCCCcCcCCCCCCH---------------------HHHHHHcCCHHHHHHHHhccC
Confidence            9999999999999 899999999999998                     677899999999999998643

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.92  E-value=9.3e-26  Score=227.85  Aligned_cols=158  Identities=26%  Similarity=0.289  Sum_probs=139.6

Q ss_pred             CCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCc
Q psy8898          23 GGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHK  102 (1236)
Q Consensus        23 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~  102 (1236)
                      ...||||.|+..|+.++|++|+++|++++..|..|+||||+|+. |+.+++++                           
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~---------------------------   55 (162)
T 1ihb_A            4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARR---------------------------   55 (162)
T ss_dssp             -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHH---------------------------
T ss_pred             hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHH---------------------------
Confidence            46789999999999999999999999999999999999999999 99999988                           


Q ss_pred             chhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCC
Q psy8898         103 DRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGS  182 (1236)
Q Consensus       103 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (1236)
                          |+++|++++.++..|.||||+|+..|+.++++.|++.....                                   
T Consensus        56 ----Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------------------------   96 (162)
T 1ihb_A           56 ----LLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV-----------------------------------   96 (162)
T ss_dssp             ----HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-----------------------------------
T ss_pred             ----HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------------------------
Confidence                99999999999999999999999999999999888753110                                   


Q ss_pred             CCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCC-CCCCCCCCCcHHHHHHHcCcHH
Q psy8898         183 GGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGAN-VNAMDLWQFTPLHEAASKSRLE  261 (1236)
Q Consensus       183 ~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~-~n~~d~~g~TpL~~A~~~g~~~  261 (1236)
                                               ......|.||||+|+..|+.+++++|+++|++ ++..|..|+||||+|+..|+.+
T Consensus        97 -------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~  151 (162)
T 1ihb_A           97 -------------------------NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE  151 (162)
T ss_dssp             -------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             -------------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence                                     00111488999999999999999999999998 6999999999999999999999


Q ss_pred             HHHHHHhCCCC
Q psy8898         262 VCSLLLSEGAD  272 (1236)
Q Consensus       262 iv~~Ll~~ga~  272 (1236)
                      ++++|+++|||
T Consensus       152 ~~~~Ll~~GAd  162 (162)
T 1ihb_A          152 VVSLMQANGAG  162 (162)
T ss_dssp             HHHHHHHTC--
T ss_pred             HHHHHHHhCCC
Confidence            99999999986

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.92  E-value=3.7e-25  Score=224.65  Aligned_cols=158  Identities=20%  Similarity=0.195  Sum_probs=140.7

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCch
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHK  623 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~  623 (1236)
                      |.||||.|+..|+.+++++|++.|++++..|..|.|||                                          
T Consensus         3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L------------------------------------------   40 (167)
T 3v31_A            3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPL------------------------------------------   40 (167)
T ss_dssp             TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHH------------------------------------------
T ss_pred             CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHH------------------------------------------
Confidence            78999999999999999999998887766655444433                                          


Q ss_pred             hHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCC
Q psy8898         624 KEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPY  703 (1236)
Q Consensus       624 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  703 (1236)
                                                                           |.|+..|+.+++++|++.+......+.
T Consensus        41 -----------------------------------------------------~~A~~~~~~~~v~~Ll~~g~~~~~~~~   67 (167)
T 3v31_A           41 -----------------------------------------------------MWAAAHGQIAVVEFLLQNGADPQLLGK   67 (167)
T ss_dssp             -----------------------------------------------------HHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             -----------------------------------------------------HHHHHCCCHHHHHHHHHcCCCCCCcCC
Confidence                                                                 344667888899999988877776777


Q ss_pred             CCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHH
Q psy8898         704 TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR  783 (1236)
Q Consensus       704 ~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~  783 (1236)
                      .|.||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+.
T Consensus        68 ~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~  144 (167)
T 3v31_A           68 GRESALSLACSK---GYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVA  144 (167)
T ss_dssp             TCCCHHHHHHHH---TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCcHHHHHHHc---CCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            799999999987   78999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhCCCC
Q psy8898         784 DDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       784 ~~~~~iv~~Ll~~ga~  799 (1236)
                      .|+.+++++|++++++
T Consensus       145 ~~~~~~~~~L~~~~~~  160 (167)
T 3v31_A          145 LGYRSVQQVIESHLLK  160 (167)
T ss_dssp             HTCHHHHHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHHHH
Confidence            9999999999998754

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.92  E-value=2.1e-25  Score=226.79  Aligned_cols=159  Identities=28%  Similarity=0.378  Sum_probs=142.8

Q ss_pred             CCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCC
Q psy8898          21 DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPM  100 (1236)
Q Consensus        21 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~  100 (1236)
                      ...+.|||+.||+.|+.++|++|+++|+++|..|..|.||||+|+..|+.+++++                         
T Consensus        11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------------------------   65 (169)
T 2y1l_E           11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEV-------------------------   65 (169)
T ss_dssp             --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH-------------------------
T ss_pred             CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH-------------------------
Confidence            4567899999999999999999999999999999999999999999999999988                         


Q ss_pred             CcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccC
Q psy8898         101 HKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS  180 (1236)
Q Consensus       101 ~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (1236)
                            |+++|++++..+..|.||||+|+..|+.++++.|++.....                                 
T Consensus        66 ------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---------------------------------  106 (169)
T 2y1l_E           66 ------LLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADV---------------------------------  106 (169)
T ss_dssp             ------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT---------------------------------
T ss_pred             ------HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---------------------------------
Confidence                  99999999999999999999999999999999888753110                                 


Q ss_pred             CCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q psy8898         181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRL  260 (1236)
Q Consensus       181 ~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~  260 (1236)
                                                 ......|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus       107 ---------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~  159 (169)
T 2y1l_E          107 ---------------------------NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNE  159 (169)
T ss_dssp             ---------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             ---------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence                                       00111488999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCC
Q psy8898         261 EVCSLLLSEG  270 (1236)
Q Consensus       261 ~iv~~Ll~~g  270 (1236)
                      +++++|++.|
T Consensus       160 ~~~~~L~~~G  169 (169)
T 2y1l_E          160 DLAEILQKLN  169 (169)
T ss_dssp             HHHHHHHTC-
T ss_pred             HHHHHHHHcC
Confidence            9999999976

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.92  E-value=3.3e-25  Score=230.76  Aligned_cols=119  Identities=22%  Similarity=0.343  Sum_probs=109.3

Q ss_pred             HHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHH
Q psy8898         676 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLD  755 (1236)
Q Consensus       676 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~  755 (1236)
                      ||+|+..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus        72 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~  148 (192)
T 2rfm_A           72 LIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIF---GYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSE  148 (192)
T ss_dssp             HHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            3344667888889999988877777777799999999987   7899999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8898         756 VLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN  797 (1236)
Q Consensus       756 iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~g  797 (1236)
                      +|++|+++|++++.+|..|.|||++|+..|+.+++++|+++|
T Consensus       149 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~  190 (192)
T 2rfm_A          149 IVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR  190 (192)
T ss_dssp             HHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999875

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.92  E-value=1.5e-27  Score=254.93  Aligned_cols=209  Identities=15%  Similarity=0.117  Sum_probs=164.7

Q ss_pred             HHHHHHcCCCcccc---CCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCc
Q psy8898           7 VEYLLASGASIHAR---DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSS   83 (1236)
Q Consensus         7 v~~Ll~~ga~~n~~---d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~   83 (1236)
                      |+.|+++|++++..   +.+|.||||.||..|+.++|++|+++|+++|..|..|+||||+|+..|+.+++++        
T Consensus         1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~--------   72 (229)
T 2vge_A            1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDF--------   72 (229)
T ss_dssp             ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHH--------
T ss_pred             CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH--------
Confidence            57899999998754   4567788999999999999999999999999999999999999999999999988        


Q ss_pred             cccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCccc
Q psy8898          84 KSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYS  163 (1236)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~  163 (1236)
                                             |+++|++++.+|..|+||||+|+..|+.++++.|++.......              
T Consensus        73 -----------------------Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~--------------  115 (229)
T 2vge_A           73 -----------------------LITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA--------------  115 (229)
T ss_dssp             -----------------------HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC--------------
T ss_pred             -----------------------HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--------------
Confidence                                   9999999999999999999999999999998888864311000              


Q ss_pred             ccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHH--HhcCcHHHHHHHHhcCCCCC
Q psy8898         164 NTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNA--CSYGHFEVTEMLIKAGANVN  241 (1236)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~A--a~~g~~~iv~~Ll~~ga~~n  241 (1236)
                                                                   .+...|+||||+|  +..|+.+++++|++.|++++
T Consensus       116 ---------------------------------------------~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~  150 (229)
T 2vge_A          116 ---------------------------------------------TTLSDGATAFEKCDPYREGYADCATYLADVEQSMG  150 (229)
T ss_dssp             ---------------------------------------------CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTT
T ss_pred             ---------------------------------------------ccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcc
Confidence                                                         0001488999999  89999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC--CCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHH
Q psy8898         242 AMDLWQFTPLHEAASKSRLEVCSLLLSEGAD--PTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKK  319 (1236)
Q Consensus       242 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~--~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~  319 (1236)
                      ..|..|.|||+.++..+   .+++|++.|++  ++.+|..|+||||+|                     +..|+.++|+.
T Consensus       151 ~~~~~~~~~l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A---------------------~~~g~~~~v~~  206 (229)
T 2vge_A          151 LMNSGAVYALWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWA---------------------ALHGQEGYVPR  206 (229)
T ss_dssp             TSGGGEEEESSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEE---------------------EETTEEEEEEG
T ss_pred             cccCCchHHHHHHhhcc---ccccCccccccccccccCCCcccHHHHH---------------------HHcCCcceeeh
Confidence            99999999998766554   33678888888  667888899998875                     56778888877


Q ss_pred             hhhcccccCC
Q psy8898         320 FLTSDVVNFK  329 (1236)
Q Consensus       320 ll~~~~~~~~  329 (1236)
                      .+-...+..+
T Consensus       207 ~~l~~~p~~~  216 (229)
T 2vge_A          207 NYFGLFPRVK  216 (229)
T ss_dssp             GGEESSCCCC
T ss_pred             hhhhhCCCCC
Confidence            6655444443

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.92  E-value=8.5e-25  Score=223.18  Aligned_cols=129  Identities=18%  Similarity=0.117  Sum_probs=116.3

Q ss_pred             ccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhC
Q psy8898         673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLG  752 (1236)
Q Consensus       673 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g  752 (1236)
                      .||||.|+..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+..|
T Consensus        37 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  113 (172)
T 3v30_A           37 FTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTG---GYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN  113 (172)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT---TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHC---CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence            3344455778889999999998887777777899999999997   8899999999999999999999999999999999


Q ss_pred             CHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q psy8898         753 HLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVS  804 (1236)
Q Consensus       753 ~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~  804 (1236)
                      +.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++....+
T Consensus       114 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~  165 (172)
T 3v30_A          114 HVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSN  165 (172)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-
T ss_pred             CHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999999998766554

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.92  E-value=1.3e-24  Score=220.46  Aligned_cols=158  Identities=22%  Similarity=0.207  Sum_probs=120.3

Q ss_pred             CCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCc
Q psy8898          23 GGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHK  102 (1236)
Q Consensus        23 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~  102 (1236)
                      +|.||||.||..|+.++|++|++.|++++..|..|.||||+|+..|+.+++++                           
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------------------   54 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEF---------------------------   54 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------------------
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHH---------------------------
Confidence            58899999999999999999999999999999999999999999999999988                           


Q ss_pred             chhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCC
Q psy8898         103 DRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGS  182 (1236)
Q Consensus       103 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (1236)
                          |+++|++++..+..|.||||+|+..++.++++.|++......                                  
T Consensus        55 ----Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------------------------------   96 (167)
T 3v31_A           55 ----LLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVN----------------------------------   96 (167)
T ss_dssp             ----HHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT----------------------------------
T ss_pred             ----HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC----------------------------------
Confidence                999999999888877777777777666666666665421100                                  


Q ss_pred             CCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy8898         183 GGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEV  262 (1236)
Q Consensus       183 ~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~i  262 (1236)
                                                .....|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus        97 --------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~  150 (167)
T 3v31_A           97 --------------------------EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSV  150 (167)
T ss_dssp             --------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             --------------------------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence                                      000136666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHhCCC
Q psy8898         263 CSLLLSEGA  271 (1236)
Q Consensus       263 v~~Ll~~ga  271 (1236)
                      +++|+++++
T Consensus       151 ~~~L~~~~~  159 (167)
T 3v31_A          151 QQVIESHLL  159 (167)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            666666543

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.92  E-value=4.7e-25  Score=226.63  Aligned_cols=168  Identities=26%  Similarity=0.356  Sum_probs=147.5

Q ss_pred             CCCcchhhHHhhcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCC
Q psy8898          22 DGGLHPLHNACSFGHADVVRLLLEA-DANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPM  100 (1236)
Q Consensus        22 ~~g~t~L~~A~~~g~~~iv~~Ll~~-ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~  100 (1236)
                      .++.+|||.||..|+.++|++|++. +.+++..|..|+||||+|+..|+.+++++                         
T Consensus         3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------------------------   57 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEM-------------------------   57 (179)
T ss_dssp             ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHH-------------------------
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHH-------------------------
Confidence            4688999999999999999999998 67899999999999999999999999988                         


Q ss_pred             CcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccC
Q psy8898         101 HKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS  180 (1236)
Q Consensus       101 ~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (1236)
                            |+++|++++..+..|.||||+|+..|+.++++.|++.....                                 
T Consensus        58 ------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------------------------------   98 (179)
T 3f6q_A           58 ------LIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI---------------------------------   98 (179)
T ss_dssp             ------HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---------------------------------
T ss_pred             ------HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---------------------------------
Confidence                  99999999999999999999999999999999888753110                                 


Q ss_pred             CCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q psy8898         181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRL  260 (1236)
Q Consensus       181 ~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~  260 (1236)
                                                 ......|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.
T Consensus        99 ---------------------------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~  151 (179)
T 3f6q_A           99 ---------------------------NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRE  151 (179)
T ss_dssp             ---------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHH
T ss_pred             ---------------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHH
Confidence                                       00111589999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCC
Q psy8898         261 EVCSLLLSEGADPTLHNCHS  280 (1236)
Q Consensus       261 ~iv~~Ll~~ga~~~~~~~~g  280 (1236)
                      +++++|+++|++++..+..+
T Consensus       152 ~~~~~L~~~g~~~~~~~~~~  171 (179)
T 3f6q_A          152 LLRERAEKMGQNLNRIPYKD  171 (179)
T ss_dssp             HHHHHHHHTTCCCSCBCCCC
T ss_pred             HHHHHHHHhhcCcccCCccc
Confidence            99999999999998776543

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.91  E-value=5.9e-24  Score=212.07  Aligned_cols=117  Identities=26%  Similarity=0.370  Sum_probs=107.7

Q ss_pred             cHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCC
Q psy8898         674 HCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGH  753 (1236)
Q Consensus       674 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~  753 (1236)
                      ||||.|+..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus        36 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~  112 (153)
T 1awc_B           36 SPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASE---GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNH  112 (153)
T ss_dssp             CHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHH---TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc---ChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence            344455778889999999998887777777799999999987   78999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy8898         754 LDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL  793 (1236)
Q Consensus       754 ~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~L  793 (1236)
                      .+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus       113 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B          113 QEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            9999999999999999999999999999999999999987

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.91  E-value=3.1e-24  Score=220.52  Aligned_cols=127  Identities=22%  Similarity=0.277  Sum_probs=117.1

Q ss_pred             HHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCH
Q psy8898         675 CLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHL  754 (1236)
Q Consensus       675 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~  754 (1236)
                      |||.||..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus        42 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~  118 (179)
T 3f6q_A           42 PLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH---GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD  118 (179)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             HHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence            34444677888999999999887777777899999999997   889999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q psy8898         755 DVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVS  804 (1236)
Q Consensus       755 ~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~  804 (1236)
                      +++++|+++|++++.+|..|.|||++|+..++.+++++|+++|++++...
T Consensus       119 ~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~  168 (179)
T 3f6q_A          119 QVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIP  168 (179)
T ss_dssp             HHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBC
T ss_pred             HHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCC
Confidence            99999999999999999999999999999999999999999999998764

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.91  E-value=4.6e-24  Score=212.86  Aligned_cols=87  Identities=24%  Similarity=0.270  Sum_probs=71.8

Q ss_pred             CcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcc
Q psy8898          24 GLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKD  103 (1236)
Q Consensus        24 g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (1236)
                      +.||||.|+..|+.++|++|+++|++++ .|..|.||||+|+..|+.+++++                            
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~----------------------------   52 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEV----------------------------   52 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHH----------------------------
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHH----------------------------
Confidence            4689999999999999999999999887 58889999999999999999988                            


Q ss_pred             hhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHh
Q psy8898         104 RSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMA  142 (1236)
Q Consensus       104 v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~  142 (1236)
                         |+++|++++.++..|+||||+|+..|+.++++.|++
T Consensus        53 ---Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~   88 (153)
T 1awc_B           53 ---LLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLK   88 (153)
T ss_dssp             ---HHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred             ---HHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHH
Confidence               999999998877776666666665555555555443

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.91  E-value=4.4e-24  Score=216.14  Aligned_cols=122  Identities=25%  Similarity=0.241  Sum_probs=111.3

Q ss_pred             ccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhC
Q psy8898         673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLG  752 (1236)
Q Consensus       673 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g  752 (1236)
                      .||||.|+..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+..|
T Consensus        43 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  119 (165)
T 3twr_A           43 STPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSY---GHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKG  119 (165)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             CCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc---CcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC
Confidence            3455556778999999999999888777777899999999997   8999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8898         753 HLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA  798 (1236)
Q Consensus       753 ~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga  798 (1236)
                      +.+++++|+++|++++.+|..|+||||+|+. ++.+++++|+++||
T Consensus       120 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA  164 (165)
T 3twr_A          120 KYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA  164 (165)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred             CHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence            9999999999999999999999999999877 99999999999986

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.91  E-value=1.4e-26  Score=247.30  Aligned_cols=107  Identities=12%  Similarity=-0.015  Sum_probs=84.6

Q ss_pred             HHcCCHHHHHHhhccCCcccCCC-CCCChHHHHH--hhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHH
Q psy8898         680 CRQGDPSRVKKFLTSDVVNFKHP-YTGDTPLHCA--VTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV  756 (1236)
Q Consensus       680 ~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A--~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~i  756 (1236)
                      +..|+.+++++|++.+......+ ..|+||||+|  +..   ++.+++++|+++|++++.+|..|.||++.++..+.   
T Consensus        95 ~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~---~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~---  168 (229)
T 2vge_A           95 ASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYRE---GYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG---  168 (229)
T ss_dssp             HHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTST---THHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST---
T ss_pred             HHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhc---ChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc---
Confidence            45566666666666665544443 3577777777  554   89999999999999999999999999996655543   


Q ss_pred             HHHHHHCCCC--ccccCCCCCcHHHHHHHcCCHHHHHH
Q psy8898         757 LDTLLRLGAK--VNLVDVLGQTALHRTARDDKTQAVRV  792 (1236)
Q Consensus       757 v~~Ll~~ga~--~n~~d~~G~tpL~~A~~~~~~~iv~~  792 (1236)
                      +++|++.|++  ++.+|.+|+||||+|+.+|+.++|+.
T Consensus       169 ~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~  206 (229)
T 2vge_A          169 DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR  206 (229)
T ss_dssp             TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred             cccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence            3688899998  77889999999999999999998864

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.90  E-value=1.1e-24  Score=220.73  Aligned_cols=160  Identities=24%  Similarity=0.288  Sum_probs=137.2

Q ss_pred             cCCCCcchhhHHhhcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCC
Q psy8898          20 RDDGGLHPLHNACSFGHADVVRLLLE-ADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGC   98 (1236)
Q Consensus        20 ~d~~g~t~L~~A~~~g~~~iv~~Ll~-~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~   98 (1236)
                      .|.+|.||||.|+..|+.++|+.|++ .+.+++..+..|.||||+|+..|+.+++++                       
T Consensus         4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~-----------------------   60 (165)
T 3twr_A            4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEY-----------------------   60 (165)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHH-----------------------
T ss_pred             CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHH-----------------------
Confidence            46788999999999999999999998 456788999999999999999999999988                       


Q ss_pred             CCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCc
Q psy8898          99 PMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQ  178 (1236)
Q Consensus        99 ~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (1236)
                              |+++|++++.+|..|+||||+|+..++.++++.|++.....                               
T Consensus        61 --------Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-------------------------------  101 (165)
T 3twr_A           61 --------LLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV-------------------------------  101 (165)
T ss_dssp             --------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-------------------------------
T ss_pred             --------HHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC-------------------------------
Confidence                    99999999999999999999999999999988888642110                               


Q ss_pred             cCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q psy8898         179 YSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKS  258 (1236)
Q Consensus       179 ~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g  258 (1236)
                                                   ......|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+. |
T Consensus       102 -----------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~  151 (165)
T 3twr_A          102 -----------------------------NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-G  151 (165)
T ss_dssp             -----------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-T
T ss_pred             -----------------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-C
Confidence                                         0001148899999999999999999999999999999999999999776 8


Q ss_pred             cHHHHHHHHhCCC
Q psy8898         259 RLEVCSLLLSEGA  271 (1236)
Q Consensus       259 ~~~iv~~Ll~~ga  271 (1236)
                      +.+++++|+++|+
T Consensus       152 ~~~i~~~L~~~gA  164 (165)
T 3twr_A          152 DTDIQDLLRGDAA  164 (165)
T ss_dssp             CHHHHHHHHTC--
T ss_pred             ChHHHHHHhhccc
Confidence            8899999999875

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.90  E-value=3.9e-24  Score=208.40  Aligned_cols=135  Identities=27%  Similarity=0.413  Sum_probs=123.9

Q ss_pred             CCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccC
Q psy8898          14 GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIG   93 (1236)
Q Consensus        14 ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~   93 (1236)
                      ++++|.+|..|+||||+||..|+.++|++|+++|++++..|..|+||||+|+. |+.+++++                  
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~------------------   62 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAEL------------------   62 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHH------------------
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHH------------------
Confidence            57899999999999999999999999999999999999999999999999999 99999988                  


Q ss_pred             CCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCC
Q psy8898          94 GGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSL  173 (1236)
Q Consensus        94 ~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (1236)
                                   |+++|++++.++..                                                     
T Consensus        63 -------------Ll~~g~~~~~~~~~-----------------------------------------------------   76 (136)
T 1d9s_A           63 -------------LLLHGAEPNCADPA-----------------------------------------------------   76 (136)
T ss_dssp             -------------HHHHTCCSSCCBTT-----------------------------------------------------
T ss_pred             -------------HHHCCCCCCCcCCC-----------------------------------------------------
Confidence                         99999998876553                                                     


Q ss_pred             CCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q psy8898         174 PPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHE  253 (1236)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~  253 (1236)
                                                             .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus        77 ---------------------------------------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~  117 (136)
T 1d9s_A           77 ---------------------------------------TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDL  117 (136)
T ss_dssp             ---------------------------------------TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHH
T ss_pred             ---------------------------------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHH
Confidence                                                   05568888888999999999999999999999999999999


Q ss_pred             HHHcCcHHHHHHHHhCCCC
Q psy8898         254 AASKSRLEVCSLLLSEGAD  272 (1236)
Q Consensus       254 A~~~g~~~iv~~Ll~~ga~  272 (1236)
                      |+..|+.+++++|+++|+|
T Consensus       118 A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A          118 AEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             HHHHTCHHHHHHHHHHHCC
T ss_pred             HHHcCCHHHHHHHHHcCCC
Confidence            9999999999999999986

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.90  E-value=4.1e-23  Score=206.87  Aligned_cols=112  Identities=23%  Similarity=0.294  Sum_probs=104.6

Q ss_pred             HcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHH
Q psy8898         681 RQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTL  760 (1236)
Q Consensus       681 ~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~L  760 (1236)
                      ..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|++.|+.++|++|
T Consensus        44 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  120 (156)
T 1bd8_A           44 MFGSTAIALELLKQGASPNVQDTSGTSPVHDAART---GFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL  120 (156)
T ss_dssp             CTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc---CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHH
Confidence            35778888899988877777777799999999997   899999999999999999999999999999999999999999


Q ss_pred             HHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8898         761 LRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSH  796 (1236)
Q Consensus       761 l~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~  796 (1236)
                      +++ ++++.+|..|.||||+|+..|+.+++++|+++
T Consensus       121 l~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A          121 AAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             Hhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            999 99999999999999999999999999999975

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.89  E-value=1e-24  Score=235.53  Aligned_cols=166  Identities=19%  Similarity=0.171  Sum_probs=116.5

Q ss_pred             CCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCC
Q psy8898          22 DGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMH  101 (1236)
Q Consensus        22 ~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~  101 (1236)
                      ..|.||||.|+..|+.++++.|+++|++++.. ..|.||||.|+..|+.+++++                          
T Consensus         3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~--------------------------   55 (239)
T 1ycs_B            3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQR--------------------------   55 (239)
T ss_dssp             -----------------------------------CHHHHHHHHHHTCHHHHHH--------------------------
T ss_pred             ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHH--------------------------
Confidence            46899999999999999999999999999865 678999999999999999988                          


Q ss_pred             cchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCC
Q psy8898         102 KDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSG  181 (1236)
Q Consensus       102 ~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (1236)
                           |+++|++++.+|..|.||||+|+..|+.++++.|++.....                  +               
T Consensus        56 -----Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~------------------~---------------   97 (239)
T 1ycs_B           56 -----IIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV------------------N---------------   97 (239)
T ss_dssp             -----HTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT------------------T---------------
T ss_pred             -----HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------------------C---------------
Confidence                 99999999999999999999999999999999888753110                  0               


Q ss_pred             CCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCC-cHHHHH--HHcC
Q psy8898         182 SGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQF-TPLHEA--ASKS  258 (1236)
Q Consensus       182 ~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~-TpL~~A--~~~g  258 (1236)
                                                 .....|+||||+||..|+.++|++|+++|++++..+..|. ||||+|  +..|
T Consensus        98 ---------------------------~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g  150 (239)
T 1ycs_B           98 ---------------------------AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEG  150 (239)
T ss_dssp             ---------------------------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTT
T ss_pred             ---------------------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhc
Confidence                                       0111589999999999999999999999999999998887 999999  8889


Q ss_pred             cHHHHHHHHhCCCCCCCCCCC
Q psy8898         259 RLEVCSLLLSEGADPTLHNCH  279 (1236)
Q Consensus       259 ~~~iv~~Ll~~ga~~~~~~~~  279 (1236)
                      +.+++++|+++|++++..+..
T Consensus       151 ~~~~~~~Ll~~~a~~~~~~~~  171 (239)
T 1ycs_B          151 YTQCSQFLYGVQEKMGIMNKG  171 (239)
T ss_dssp             CCCHHHHHHHHHHHTTTTGGG
T ss_pred             cHHHHHHHHHhhhcccccccc
Confidence            999999999999999887443

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.89  E-value=6.3e-24  Score=212.49  Aligned_cols=145  Identities=26%  Similarity=0.360  Sum_probs=113.1

Q ss_pred             ccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCC
Q psy8898          17 IHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGT   96 (1236)
Q Consensus        17 ~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~   96 (1236)
                      .+..+..|.||||+||..|+.++|++|+++|++++..|..|+||||+|+ .|+.+++++                     
T Consensus         5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~---------------------   62 (156)
T 1bi7_B            5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAEL---------------------   62 (156)
T ss_dssp             -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHH---------------------
T ss_pred             ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHH---------------------
Confidence            3456778999999999999999999999999999999999999999985 889999887                     


Q ss_pred             CCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCC
Q psy8898          97 GCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPP  176 (1236)
Q Consensus        97 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (1236)
                                |+++|++++.++..                                                        
T Consensus        63 ----------Ll~~g~~~~~~d~~--------------------------------------------------------   76 (156)
T 1bi7_B           63 ----------LLLHGAEPNCADPA--------------------------------------------------------   76 (156)
T ss_dssp             ----------HHTTTCCCCCCCTT--------------------------------------------------------
T ss_pred             ----------HHHcCCCCCCcCCC--------------------------------------------------------
Confidence                      89999988866554                                                        


Q ss_pred             CccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCch-HHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q psy8898         177 AQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLV-PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAA  255 (1236)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T-~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~  255 (1236)
                                                           |+| |||+|+..|+.++|++|+++|++++.+|..|+||||+|+
T Consensus        77 -------------------------------------g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~  119 (156)
T 1bi7_B           77 -------------------------------------TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE  119 (156)
T ss_dssp             -------------------------------------TCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHH
T ss_pred             -------------------------------------CCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence                                                 455 888888899999999999999999999999999999999


Q ss_pred             HcCcHHHHHHHHhCCCCCCCCCCCCCCcccc
Q psy8898         256 SKSRLEVCSLLLSEGADPTLHNCHSKSAIDV  286 (1236)
Q Consensus       256 ~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~  286 (1236)
                      ..|+.+++++|+++|++++..+..|.||.+-
T Consensus       120 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~  150 (156)
T 1bi7_B          120 ELGHRDVARYLRAAAGGTRGSNHARIDAAEG  150 (156)
T ss_dssp             HHTCHHHHHHHSSCC----------------
T ss_pred             HhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence            9999999999999999999999999998654

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.89  E-value=4.7e-23  Score=206.42  Aligned_cols=153  Identities=22%  Similarity=0.323  Sum_probs=115.2

Q ss_pred             CcchhhHHhhcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCc
Q psy8898          24 GLHPLHNACSFGHADVVRLLLEA-DANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHK  102 (1236)
Q Consensus        24 g~t~L~~A~~~g~~~iv~~Ll~~-ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~  102 (1236)
                      |.||||.||..|+.++|+.|++. +.+++..|..|.||||+ +..|+.+++++                           
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~---------------------------   53 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALE---------------------------   53 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHH---------------------------
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHH---------------------------
Confidence            56899999999999999999998 34899999999999999 99999999987                           


Q ss_pred             chhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCC
Q psy8898         103 DRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGS  182 (1236)
Q Consensus       103 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (1236)
                          |+++|++++.+|..|.||||+|+..|+.++++.|++.....                                   
T Consensus        54 ----Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----------------------------------   94 (156)
T 1bd8_A           54 ----LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV-----------------------------------   94 (156)
T ss_dssp             ----HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-----------------------------------
T ss_pred             ----HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-----------------------------------
Confidence                99999999988887777777777776666666666532100                                   


Q ss_pred             CCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy8898         183 GGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEV  262 (1236)
Q Consensus       183 ~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~i  262 (1236)
                                               ......|.||||+|+..|+.+++++|++. ++++.+|.+|+||||+|+..|+.++
T Consensus        95 -------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~  148 (156)
T 1bd8_A           95 -------------------------NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDL  148 (156)
T ss_dssp             -------------------------CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHH
T ss_pred             -------------------------CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHH
Confidence                                     00001366777777777777777777766 7777777777777777777777777


Q ss_pred             HHHHHhC
Q psy8898         263 CSLLLSE  269 (1236)
Q Consensus       263 v~~Ll~~  269 (1236)
                      +++|+++
T Consensus       149 v~~Ll~~  155 (156)
T 1bd8_A          149 VDILQGH  155 (156)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHhh
Confidence            7777653

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.89  E-value=4.1e-23  Score=201.13  Aligned_cols=132  Identities=23%  Similarity=0.300  Sum_probs=125.6

Q ss_pred             cccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCC-Cc
Q psy8898         664 MPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKE-LL  742 (1236)
Q Consensus       664 ~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~-G~  742 (1236)
                      +++.++..|.||||.|+..|+.+++++|++.+......+..|+||||+|+.    ++.+++++|+++|++++.+|.. |+
T Consensus         4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~----~~~~~v~~Ll~~g~~~~~~~~~~g~   79 (136)
T 1d9s_A            4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM----GSAQVAELLLLHGAEPNCADPATLT   79 (136)
T ss_dssp             CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT----SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred             CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc----CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            457788899999999999999999999999988777777889999999997    6899999999999999999999 99


Q ss_pred             hHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8898         743 APIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       743 T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~  799 (1236)
                      ||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|||
T Consensus        80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999999999986

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.89  E-value=1.1e-23  Score=227.42  Aligned_cols=129  Identities=23%  Similarity=0.257  Sum_probs=120.0

Q ss_pred             ccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhC
Q psy8898         673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLG  752 (1236)
Q Consensus       673 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g  752 (1236)
                      .|+||.|+..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|+++|.+|..|+||||+|+..|
T Consensus        38 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~  114 (239)
T 1ycs_B           38 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA---GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN  114 (239)
T ss_dssp             HHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH---TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             hHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            4567777899999999999999987777788899999999997   8999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHCCCCccccCCCCC-cHHHHH--HHcCCHHHHHHHHhCCCCCCccc
Q psy8898         753 HLDVLDTLLRLGAKVNLVDVLGQ-TALHRT--ARDDKTQAVRVLLSHNADTSIVS  804 (1236)
Q Consensus       753 ~~~iv~~Ll~~ga~~n~~d~~G~-tpL~~A--~~~~~~~iv~~Ll~~ga~~~~~~  804 (1236)
                      +.++|++|+++|++++.+|..|. ||||+|  +..|+.+++++|+++|++++..+
T Consensus       115 ~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~  169 (239)
T 1ycs_B          115 NVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMN  169 (239)
T ss_dssp             CHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTG
T ss_pred             CHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccc
Confidence            99999999999999999998887 999999  88999999999999999887753

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.88  E-value=1.6e-23  Score=214.77  Aligned_cols=160  Identities=13%  Similarity=0.090  Sum_probs=131.7

Q ss_pred             CcHHHHHHHHHcCCCccccC-CCCcchhhHHhhcCCH----HHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEee
Q psy8898           2 GRKDVVEYLLASGASIHARD-DGGLHPLHNACSFGHA----DVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGI   76 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~d-~~g~t~L~~A~~~g~~----~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~L   76 (1236)
                      |+.+.++.++..|.  +.++ ..|+||||+|+.+|+.    ++|++|+++|+++|.+|..|+||||+|+..|+.++... 
T Consensus        17 g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~-   93 (186)
T 3t8k_A           17 GTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGT-   93 (186)
T ss_dssp             SCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHH-
T ss_pred             CCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhH-
Confidence            88999999998864  4455 7899999999999985    59999999999999999999999999999998654110 


Q ss_pred             eccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCC-CcchhhcccChHHHHHHHHhcCCCCCCCCCCCC
Q psy8898          77 YFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQ-TPLDLTVAEDVRSLLQDAMAQYPGAPSCAETAS  155 (1236)
Q Consensus        77 l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~-t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~  155 (1236)
                                              ...|++|+++|++++.+|..|. ||||+|+..+..                     
T Consensus        94 ------------------------~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~---------------------  128 (186)
T 3t8k_A           94 ------------------------TELCKIFLEKGADITALYKPYKIVVFKNIFNYFVD---------------------  128 (186)
T ss_dssp             ------------------------HHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSC---------------------
T ss_pred             ------------------------HHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCC---------------------
Confidence                                    0112349999999999999999 999999864321                     


Q ss_pred             CCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHh
Q psy8898         156 VPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIK  235 (1236)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~  235 (1236)
                                                                                         ..++.+++++|++
T Consensus       129 -------------------------------------------------------------------~~~~~~iv~~Ll~  141 (186)
T 3t8k_A          129 -------------------------------------------------------------------ENEMIPLYKLIFS  141 (186)
T ss_dssp             -------------------------------------------------------------------HHHHHHHHHHHHT
T ss_pred             -------------------------------------------------------------------hhhHHHHHHHHHH
Confidence                                                                               0145678999999


Q ss_pred             -cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC
Q psy8898         236 -AGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH  276 (1236)
Q Consensus       236 -~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~  276 (1236)
                       +|++++.+|..|+||||+|++.|+.++|++|.++..+.+.+
T Consensus       142 ~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~  183 (186)
T 3t8k_A          142 QSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLK  183 (186)
T ss_dssp             STTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCC
T ss_pred             hcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcc
Confidence             99999999999999999999999999999999875544443

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.87  E-value=1.5e-22  Score=202.50  Aligned_cols=136  Identities=23%  Similarity=0.263  Sum_probs=119.1

Q ss_pred             cchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCch-H
Q psy8898         666 RIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLA-P  744 (1236)
Q Consensus       666 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T-~  744 (1236)
                      ...+..+.||||.|+..|+.+++++|++.+......+..|+||||+|+ .   ++.+++++|+++|++++.+|..|+| |
T Consensus         6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~---~~~~~v~~Ll~~g~~~~~~d~~g~ttp   81 (156)
T 1bi7_B            6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-M---GSARVAELLLLHGAEPNCADPATLTRP   81 (156)
T ss_dssp             ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-T---TCHHHHHHHHTTTCCCCCCCTTTCCCH
T ss_pred             cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-c---CCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence            445678899999999999999999999998877777778999999985 3   7899999999999999999999999 9


Q ss_pred             HHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q psy8898         745 IHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSL  805 (1236)
Q Consensus       745 Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~  805 (1236)
                      ||+|++.|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus        82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~  142 (156)
T 1bi7_B           82 VHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNH  142 (156)
T ss_dssp             HHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------
T ss_pred             HHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCc
Confidence            9999999999999999999999999999999999999999999999999999999988753

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.87  E-value=7.2e-22  Score=192.28  Aligned_cols=127  Identities=31%  Similarity=0.435  Sum_probs=119.3

Q ss_pred             hhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHH
Q psy8898         668 KDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHL  747 (1236)
Q Consensus       668 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~  747 (1236)
                      ....+.|+||.|+..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+
T Consensus        10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~   86 (136)
T 2jab_A           10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAH---GHLEIVEVLLKNGADVNAVDAIGFTPLHL   86 (136)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred             ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCcCCCCCCCHHHH
Confidence            345678999999999999999999999887777778899999999997   78999999999999999999999999999


Q ss_pred             HHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8898         748 AADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN  797 (1236)
Q Consensus       748 A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~g  797 (1236)
                      |+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus        87 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           87 AAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             HHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999987

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.86  E-value=1.2e-21  Score=188.00  Aligned_cols=126  Identities=37%  Similarity=0.454  Sum_probs=120.8

Q ss_pred             ccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHH
Q psy8898         671 FKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAAD  750 (1236)
Q Consensus       671 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~  750 (1236)
                      +|.|||+.|+..|+.+++++|++.+......+..|.||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+.
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~   77 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN---GHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR   77 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Confidence            478999999999999999999999887777777899999999997   88999999999999999999999999999999


Q ss_pred             hCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8898         751 LGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       751 ~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~  799 (1236)
                      .|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++||+
T Consensus        78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999999999986

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.86  E-value=2.5e-22  Score=205.91  Aligned_cols=130  Identities=14%  Similarity=0.116  Sum_probs=108.3

Q ss_pred             cccHHHHHHHcCCH----HHHHHhhccCCcccCCCCCCChHHHHHhhCCCCC---hHHHHHHHHHcCCCCCCCCCCCc-h
Q psy8898         672 KGHCLLEACRQGDP----SRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPK---RKAIVESLIRKGAHLNEKNKELL-A  743 (1236)
Q Consensus       672 ~~~~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~---~~~iv~~Ll~~gadin~~d~~G~-T  743 (1236)
                      |.||||+|+..|+.    +++++|++.+......+..|+||||+|+..+...   ..+++++|+++|+|+|.+|..|+ |
T Consensus        38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tt  117 (186)
T 3t8k_A           38 KSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIV  117 (186)
T ss_dssp             TTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBC
T ss_pred             CCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCch
Confidence            33444444555553    5899999999988888888999999999863211   26899999999999999999999 9


Q ss_pred             HHHHHHHhC-----CHHHHHHHHH-CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy8898         744 PIHLAADLG-----HLDVLDTLLR-LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTS  801 (1236)
Q Consensus       744 ~Lh~A~~~g-----~~~iv~~Ll~-~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~  801 (1236)
                      |||+|+..+     +.+++++|++ +|+++|.+|..|+||||+|++.|+.++|++|+++..+.+
T Consensus       118 pLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~  181 (186)
T 3t8k_A          118 VFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYN  181 (186)
T ss_dssp             TTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence            999999944     4679999999 999999999999999999999999999999998754433

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.85  E-value=1.1e-21  Score=190.96  Aligned_cols=127  Identities=31%  Similarity=0.440  Sum_probs=115.8

Q ss_pred             cCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCC
Q psy8898          20 RDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCP   99 (1236)
Q Consensus        20 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~   99 (1236)
                      ....|.||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++                        
T Consensus        10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~------------------------   65 (136)
T 2jab_A           10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEV------------------------   65 (136)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH------------------------
T ss_pred             ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH------------------------
Confidence            34578999999999999999999999999999999999999999999999999988                        


Q ss_pred             CCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCcc
Q psy8898         100 MHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQY  179 (1236)
Q Consensus       100 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (1236)
                             |+++|++++.+|..                                                           
T Consensus        66 -------Ll~~g~~~~~~d~~-----------------------------------------------------------   79 (136)
T 2jab_A           66 -------LLKNGADVNAVDAI-----------------------------------------------------------   79 (136)
T ss_dssp             -------HHHTTCCTTCCCTT-----------------------------------------------------------
T ss_pred             -------HHHcCCCCCcCCCC-----------------------------------------------------------
Confidence                   99999998866543                                                           


Q ss_pred             CCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc
Q psy8898         180 SGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSR  259 (1236)
Q Consensus       180 ~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~  259 (1236)
                                                        |.||||+|+..|+.+++++|+++|++++..|.+|+||||+|+..|+
T Consensus        80 ----------------------------------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~  125 (136)
T 2jab_A           80 ----------------------------------GFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGN  125 (136)
T ss_dssp             ----------------------------------CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             ----------------------------------CCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCC
Confidence                                              5567888888899999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCC
Q psy8898         260 LEVCSLLLSEG  270 (1236)
Q Consensus       260 ~~iv~~Ll~~g  270 (1236)
                      .+++++|+++|
T Consensus       126 ~~~~~~Ll~~G  136 (136)
T 2jab_A          126 EDLAEILQKLN  136 (136)
T ss_dssp             HHHHHHHHHC-
T ss_pred             HHHHHHHHHcC
Confidence            99999999976

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.85  E-value=1.9e-21  Score=186.71  Aligned_cols=126  Identities=48%  Similarity=0.634  Sum_probs=117.0

Q ss_pred             CCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCc
Q psy8898          23 GGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHK  102 (1236)
Q Consensus        23 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~  102 (1236)
                      +|+||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++                           
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~---------------------------   53 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL---------------------------   53 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHH---------------------------
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHH---------------------------
Confidence            58999999999999999999999999999999999999999999999999988                           


Q ss_pred             chhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCC
Q psy8898         103 DRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGS  182 (1236)
Q Consensus       103 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (1236)
                          |+++|++++.++..                                                              
T Consensus        54 ----Ll~~g~~~~~~~~~--------------------------------------------------------------   67 (126)
T 1n0r_A           54 ----LLEAGADVNAKDKN--------------------------------------------------------------   67 (126)
T ss_dssp             ----HHHTTCCTTCCCTT--------------------------------------------------------------
T ss_pred             ----HHHcCCCCcccCCC--------------------------------------------------------------
Confidence                99999998766543                                                              


Q ss_pred             CCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHH
Q psy8898         183 GGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEV  262 (1236)
Q Consensus       183 ~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~i  262 (1236)
                                                     |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++
T Consensus        68 -------------------------------g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~  116 (126)
T 1n0r_A           68 -------------------------------GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV  116 (126)
T ss_dssp             -------------------------------SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             -------------------------------CCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHH
Confidence                                           5568888888899999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCC
Q psy8898         263 CSLLLSEGAD  272 (1236)
Q Consensus       263 v~~Ll~~ga~  272 (1236)
                      +++|+++|+|
T Consensus       117 ~~~Ll~~Gad  126 (126)
T 1n0r_A          117 VKLLLEAGAY  126 (126)
T ss_dssp             HHHHHHHTCC
T ss_pred             HHHHHHcCCC
Confidence            9999999986

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.85  E-value=5e-22  Score=193.81  Aligned_cols=134  Identities=28%  Similarity=0.391  Sum_probs=115.1

Q ss_pred             CCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccC
Q psy8898          14 GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIG   93 (1236)
Q Consensus        14 ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~   93 (1236)
                      |+|+ .+|.+|+||||+||..|+.++|++|+++|++++..|..|+||||+|+..|+.+++++                  
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~------------------   61 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVEL------------------   61 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH------------------
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHH------------------
Confidence            6788 689999999999999999999999999999999999999999999999999999988                  


Q ss_pred             CCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCC
Q psy8898          94 GGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSL  173 (1236)
Q Consensus        94 ~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (1236)
                                   |+++|++++.+|..                                                     
T Consensus        62 -------------Ll~~g~~~~~~~~~-----------------------------------------------------   75 (137)
T 3c5r_A           62 -------------LLQHKALVNTTGYQ-----------------------------------------------------   75 (137)
T ss_dssp             -------------HHHTTCCTTCCCGG-----------------------------------------------------
T ss_pred             -------------HHHcCCcccCcCCC-----------------------------------------------------
Confidence                         99999998866543                                                     


Q ss_pred             CCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q psy8898         174 PPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHE  253 (1236)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~  253 (1236)
                                                              |.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus        76 ----------------------------------------g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~  115 (137)
T 3c5r_A           76 ----------------------------------------NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDY  115 (137)
T ss_dssp             ----------------------------------------GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred             ----------------------------------------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence                                                    5567888888899999999999999999999999999999


Q ss_pred             HHHcCcHHHHHHHHhCCCC
Q psy8898         254 AASKSRLEVCSLLLSEGAD  272 (1236)
Q Consensus       254 A~~~g~~~iv~~Ll~~ga~  272 (1236)
                      |+..+..+++++|.+.+..
T Consensus       116 A~~~~~~~~l~~l~~~~~s  134 (137)
T 3c5r_A          116 TDDESMKSLLLLPEKNESS  134 (137)
T ss_dssp             CCCHHHHHHHSCC------
T ss_pred             HhhccHHHHHhhccccccC
Confidence            9999999999888776543

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.83  E-value=1.9e-21  Score=189.70  Aligned_cols=130  Identities=25%  Similarity=0.293  Sum_probs=118.1

Q ss_pred             chhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHH
Q psy8898         667 IKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIH  746 (1236)
Q Consensus       667 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh  746 (1236)
                      .++..|.||||.|+..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||
T Consensus         5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~L~   81 (137)
T 3c5r_A            5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNH---GHLKVVELLLQHKALVNTTGYQNDSPLH   81 (137)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc---CCHHHHHHHHHcCCcccCcCCCCCCHHH
Confidence            5678899999999999999999999999887777778899999999997   8999999999999999999999999999


Q ss_pred             HHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8898         747 LAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       747 ~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~  799 (1236)
                      +|++.|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|.+.+..
T Consensus        82 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s  134 (137)
T 3c5r_A           82 DAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS  134 (137)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence            99999999999999999999999999999999999999999999998887654

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.81  E-value=2.8e-20  Score=177.38  Aligned_cols=117  Identities=26%  Similarity=0.323  Sum_probs=105.0

Q ss_pred             hccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHH
Q psy8898         670 EFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAA  749 (1236)
Q Consensus       670 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~  749 (1236)
                      ..+.|+|+.|+..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+
T Consensus         5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~   81 (123)
T 3aaa_C            5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADC---GQLEILEFLLLKGADINAPDKHHITPLLSAV   81 (123)
T ss_dssp             --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHT---TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence            4678999999999999999999999887777777899999999997   8899999999999999999999999999999


Q ss_pred             HhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHH
Q psy8898         750 DLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQA  789 (1236)
Q Consensus       750 ~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~i  789 (1236)
                      ..|+.++|++|+++|++++.+|.+|+||||+|...+..++
T Consensus        82 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l  121 (123)
T 3aaa_C           82 YEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL  121 (123)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred             HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence            9999999999999999999999999999999954444433

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.81  E-value=6.3e-20  Score=164.91  Aligned_cols=93  Identities=42%  Similarity=0.605  Sum_probs=89.0

Q ss_pred             CCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHH
Q psy8898         704 TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTAR  783 (1236)
Q Consensus       704 ~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~  783 (1236)
                      +|+||||+|+..   ++.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.
T Consensus         1 ~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~   77 (93)
T 1n0q_A            1 NGRTPLHLAARN---GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR   77 (93)
T ss_dssp             --CCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence            389999999997   88999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHhCCCC
Q psy8898         784 DDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       784 ~~~~~iv~~Ll~~ga~  799 (1236)
                      .|+.+++++|+++||+
T Consensus        78 ~~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           78 NGHLEVVKLLLEAGAY   93 (93)
T ss_dssp             TTCHHHHHHHHHTTCC
T ss_pred             cCCHHHHHHHHHcCCC
Confidence            9999999999999985

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.80  E-value=1e-20  Score=201.83  Aligned_cols=140  Identities=20%  Similarity=0.190  Sum_probs=112.8

Q ss_pred             cccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCC
Q psy8898          18 HARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTG   97 (1236)
Q Consensus        18 n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~   97 (1236)
                      +.+|..|+||||+||..|+.++|++|++.|++++..|..|+||||+|+..|+.++|++                      
T Consensus        67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------------  124 (222)
T 3ehr_A           67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEM----------------------  124 (222)
T ss_dssp             HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH----------------------
T ss_pred             cccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHH----------------------
Confidence            3456788999999999999999999999999999999999999999999999999988                      


Q ss_pred             CCCCcchhHHHhc-CCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCC
Q psy8898          98 CPMHKDRSCYLAH-GADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPP  176 (1236)
Q Consensus        98 ~~~~~~v~~Ll~~-ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (1236)
                               |+++ |++++.+|..                                                        
T Consensus       125 ---------Ll~~~g~~~~~~d~~--------------------------------------------------------  139 (222)
T 3ehr_A          125 ---------LFTQPNIELNQQNKL--------------------------------------------------------  139 (222)
T ss_dssp             ---------HTTSTTCCCCCCCTT--------------------------------------------------------
T ss_pred             ---------HHcCCCCCccccCCC--------------------------------------------------------
Confidence                     8888 9998876654                                                        


Q ss_pred             CccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q psy8898         177 AQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAAS  256 (1236)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~  256 (1236)
                                                           |+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.
T Consensus       140 -------------------------------------g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~  182 (222)
T 3ehr_A          140 -------------------------------------GDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATN  182 (222)
T ss_dssp             -------------------------------------SCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCS
T ss_pred             -------------------------------------CCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcc
Confidence                                                 5567888888899999999999999999999999999999999


Q ss_pred             cCcHHHHHHHHhCCCCCCCCCCCCC
Q psy8898         257 KSRLEVCSLLLSEGADPTLHNCHSK  281 (1236)
Q Consensus       257 ~g~~~iv~~Ll~~ga~~~~~~~~g~  281 (1236)
                      .|+.++++.|++.|+..+..+..+.
T Consensus       183 ~~~~~~l~~l~~~~~~~~~~~~~~~  207 (222)
T 3ehr_A          183 AACASLLKKKQGTDAVRTLSNAEDY  207 (222)
T ss_dssp             HHHHHHHC-----------------
T ss_pred             hhHHHHHHHHhccchhhhccchhhh
Confidence            9999999999999999887765443

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.80  E-value=3.2e-20  Score=197.98  Aligned_cols=137  Identities=24%  Similarity=0.240  Sum_probs=117.3

Q ss_pred             cchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHc-CCCCCCCCCCCchH
Q psy8898         666 RIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRK-GAHLNEKNKELLAP  744 (1236)
Q Consensus       666 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~-gadin~~d~~G~T~  744 (1236)
                      +..+..|.||||.||..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++ |+++|.+|..|+||
T Consensus        67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~g~~~~~~d~~g~tp  143 (222)
T 3ehr_A           67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHG---GHKDIVEMLFTQPNIELNQQNKLGDTA  143 (222)
T ss_dssp             HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHTTSTTCCCCCCCTTSCCH
T ss_pred             cccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHc---CCHHHHHHHHcCCCCCccccCCCCCCH
Confidence            34667899999999999999999999999887777778899999999997   899999999999 99999999999999


Q ss_pred             HHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q psy8898         745 IHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSL  805 (1236)
Q Consensus       745 Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~  805 (1236)
                      ||+|+..|+.++|++|+++|++++.+|..|.|||++|+..++.++++.|+++|+.....+.
T Consensus       144 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~  204 (222)
T 3ehr_A          144 LHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA  204 (222)
T ss_dssp             HHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence            9999999999999999999999999999999999999999999999999999998877653

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.79  E-value=7.2e-20  Score=174.57  Aligned_cols=118  Identities=20%  Similarity=0.182  Sum_probs=101.1

Q ss_pred             cCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCC
Q psy8898          20 RDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCP   99 (1236)
Q Consensus        20 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~   99 (1236)
                      .+..|.||||+|+..|+.++|++|++.|++++..|..|+||||+|+..|+.+++++                        
T Consensus         3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~------------------------   58 (123)
T 3aaa_C            3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEF------------------------   58 (123)
T ss_dssp             ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHH------------------------
T ss_pred             cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHH------------------------
Confidence            35678999999999999999999999999999999999999999999999999987                        


Q ss_pred             CCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCcc
Q psy8898         100 MHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQY  179 (1236)
Q Consensus       100 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (1236)
                             |+++|++++.+|..                                                           
T Consensus        59 -------Ll~~g~~~~~~d~~-----------------------------------------------------------   72 (123)
T 3aaa_C           59 -------LLLKGADINAPDKH-----------------------------------------------------------   72 (123)
T ss_dssp             -------HHTTTCCTTCCCTT-----------------------------------------------------------
T ss_pred             -------HHHcCCCCCcCCCC-----------------------------------------------------------
Confidence                   99999998876543                                                           


Q ss_pred             CCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc
Q psy8898         180 SGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSR  259 (1236)
Q Consensus       180 ~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~  259 (1236)
                                                        |+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|...+.
T Consensus        73 ----------------------------------g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~  118 (123)
T 3aaa_C           73 ----------------------------------HITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAI  118 (123)
T ss_dssp             ----------------------------------SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHH
T ss_pred             ----------------------------------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHH
Confidence                                              5567888888899999999999999999999999999999954443


Q ss_pred             HH
Q psy8898         260 LE  261 (1236)
Q Consensus       260 ~~  261 (1236)
                      .+
T Consensus       119 ~~  120 (123)
T 3aaa_C          119 KA  120 (123)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.79  E-value=3e-19  Score=183.70  Aligned_cols=141  Identities=23%  Similarity=0.235  Sum_probs=122.5

Q ss_pred             chhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCC-CCCchHH
Q psy8898         667 IKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN-KELLAPI  745 (1236)
Q Consensus       667 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d-~~G~T~L  745 (1236)
                      ..+..|.||||.|+..|+.+++++|++ +......+..|+||||+|+..   ++.+++++|+++|+++|.+| ..|+|||
T Consensus        39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~---~~~~~v~~Ll~~ga~~~~~~~~~g~tpL  114 (183)
T 3deo_A           39 DVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGL---GSDKCVRLLAEAGADLDHRDMRGGLTAL  114 (183)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCSSSSCCHH
T ss_pred             cCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCcCCCCCCCCHH
Confidence            356789999999999999999999999 666666777899999999997   89999999999999999998 8999999


Q ss_pred             HHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccchhHHHhhhchHHHHHHHH
Q psy8898         746 HLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFE  825 (1236)
Q Consensus       746 h~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~  825 (1236)
                      |+|+..|+.+++++|+++|++++.+|..|+||||+|++.++.+.               ..+.+..+...+..++++++.
T Consensus       115 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~---------------~~~~l~~a~~~~~~~i~~~L~  179 (183)
T 3deo_A          115 HMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTP---------------KGNPMQFGRRIGLEKVINVLE  179 (183)
T ss_dssp             HHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCC---------------CCSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcc---------------cccHHHHHHHcCHHHHHHHHH
Confidence            99999999999999999999999999999999999998654422               223455666777777777775


Q ss_pred             H
Q psy8898         826 R  826 (1236)
Q Consensus       826 ~  826 (1236)
                      +
T Consensus       180 ~  180 (183)
T 3deo_A          180 G  180 (183)
T ss_dssp             T
T ss_pred             H
Confidence            4

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.78  E-value=7.6e-19  Score=192.96  Aligned_cols=130  Identities=21%  Similarity=0.192  Sum_probs=118.8

Q ss_pred             ccHHHHHHHcCCHHHHHHhhccCCcc------cCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHH
Q psy8898         673 GHCLLEACRQGDPSRVKKFLTSDVVN------FKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIH  746 (1236)
Q Consensus       673 ~~~L~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh  746 (1236)
                      .++|+.|+..|+.+.++.++..+...      ...+..|+||||+|+..+..++.+++++|+++|+++|.+|..|+||||
T Consensus       131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh  210 (278)
T 1dcq_A          131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH  210 (278)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred             hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence            46899999999999999999987753      233566999999999964446899999999999999999999999999


Q ss_pred             HHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q psy8898         747 LAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSI  802 (1236)
Q Consensus       747 ~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~  802 (1236)
                      +|+..|+.++|++|+++|++++.+|.+|.||||+|+..|+.+++++|+++|++...
T Consensus       211 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~  266 (278)
T 1dcq_A          211 YCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN  266 (278)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred             HHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence            99999999999999999999999999999999999999999999999999987544

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.78  E-value=1.1e-19  Score=187.02  Aligned_cols=92  Identities=18%  Similarity=0.126  Sum_probs=70.4

Q ss_pred             cCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCC
Q psy8898          20 RDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCP   99 (1236)
Q Consensus        20 ~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~   99 (1236)
                      .+.+|+||||.||..|+.++|++|++ |+++|..|..|+||||+|+..|+.+++++                        
T Consensus        40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~------------------------   94 (183)
T 3deo_A           40 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRL------------------------   94 (183)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHH------------------------
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHH------------------------
Confidence            34567778888888888888887777 77777777777888888888777777776                        


Q ss_pred             CCcchhHHHhcCCCCCCcc-cCCCCcchhhcccChHHHHHHHHhc
Q psy8898         100 MHKDRSCYLAHGADPFLKN-QEGQTPLDLTVAEDVRSLLQDAMAQ  143 (1236)
Q Consensus       100 ~~~~v~~Ll~~ga~~~~~~-~~g~t~L~~A~~~~~~~~v~~l~~~  143 (1236)
                             |+++|++++.++ ..|+||||+|+..|+.++++.|++.
T Consensus        95 -------Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~  132 (183)
T 3deo_A           95 -------LAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL  132 (183)
T ss_dssp             -------HHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             -------HHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHc
Confidence                   777777777776 7777888888777777777777764

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.77  E-value=5e-19  Score=196.75  Aligned_cols=129  Identities=24%  Similarity=0.228  Sum_probs=119.1

Q ss_pred             cccHHHHHHHcCCHHHHHHhhccCCcccC------CCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHH
Q psy8898         672 KGHCLLEACRQGDPSRVKKFLTSDVVNFK------HPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPI  745 (1236)
Q Consensus       672 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~------~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~L  745 (1236)
                      ..++|+.|+..|+.+.+++|+..+.....      .+..|+||||+|+..+..++.+++++|+++|+++|.+|..|+|||
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL  230 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL  230 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred             hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence            34689999999999999999998876554      466799999999986444789999999999999999999999999


Q ss_pred             HHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q psy8898         746 HLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADT  800 (1236)
Q Consensus       746 h~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~  800 (1236)
                      |+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus       231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~  285 (301)
T 2b0o_E          231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT  285 (301)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999999999999874

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.77  E-value=3e-19  Score=198.47  Aligned_cols=139  Identities=19%  Similarity=0.067  Sum_probs=120.0

Q ss_pred             CCCcchhhHHhhcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHh---CCCceEEeeeccccCcccccccccc
Q psy8898          22 DGGLHPLHNACSFGHADVVRLLLEADANPNT------RDNWNFTPLHEAAAK---GKTDVCIGIYFAEHSSKSNQYVYGI   92 (1236)
Q Consensus        22 ~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~------~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~   92 (1236)
                      ..+.++|+.|+..|+.+.|+.|++.|++++.      .|..|.||||+|+..   |+.+++++                 
T Consensus       149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~-----------------  211 (301)
T 2b0o_E          149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDF-----------------  211 (301)
T ss_dssp             C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHH-----------------
T ss_pred             CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHH-----------------
Confidence            3455789999999999999999999999998      699999999999997   88888887                 


Q ss_pred             CCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCC
Q psy8898          93 GGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVS  172 (1236)
Q Consensus        93 ~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (1236)
                                    |+++|++++.+|..                                                    
T Consensus       212 --------------Ll~~gadvn~~d~~----------------------------------------------------  225 (301)
T 2b0o_E          212 --------------IIQNGGHLDAKAAD----------------------------------------------------  225 (301)
T ss_dssp             --------------HHHHSSCTTCCCTT----------------------------------------------------
T ss_pred             --------------HHhcCCCCCCCCCC----------------------------------------------------
Confidence                          99999999876554                                                    


Q ss_pred             CCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHH
Q psy8898         173 LPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLH  252 (1236)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~  252 (1236)
                                                               |+||||+|+..|+.++|++|+++|++++.+|.+|+||||
T Consensus       226 -----------------------------------------G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~  264 (301)
T 2b0o_E          226 -----------------------------------------GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD  264 (301)
T ss_dssp             -----------------------------------------CCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHH
T ss_pred             -----------------------------------------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence                                                     556788888889999999999999999999999999999


Q ss_pred             HHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccch
Q psy8898         253 EAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTR  290 (1236)
Q Consensus       253 ~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~  290 (1236)
                      +|+..|+.+++++|+++|++      .|.||||+|+..
T Consensus       265 ~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~  296 (301)
T 2b0o_E          265 IARKKHHKECEELLEQAQAG------TFAFPLHVDYSW  296 (301)
T ss_dssp             HHHHHTCHHHHHHHHHHHHH------TTSSCCC-----
T ss_pred             HHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhc
Confidence            99999999999999999886      478998887543

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.77  E-value=8e-19  Score=189.53  Aligned_cols=143  Identities=22%  Similarity=0.235  Sum_probs=122.6

Q ss_pred             cchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCC-CCCchH
Q psy8898         666 RIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN-KELLAP  744 (1236)
Q Consensus       666 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d-~~G~T~  744 (1236)
                      ...+..|.||||.||..|+.+++++|++ +......+..|+||||+|+..   ++.++|++|+++|+++|.+| ..|+||
T Consensus        39 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~~g~t~  114 (244)
T 3ui2_A           39 ADVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGL---GSDKCVRLLAEAGADLDHRDMRGGLTA  114 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHH---TCHHHHHHHHHTTCCTTCCCSSSCCCH
T ss_pred             cccccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHC---CCHHHHHHHHHcCCCCCcCCCCCCCCH
Confidence            3455689999999999999999999999 666666677799999999997   89999999999999999998 889999


Q ss_pred             HHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccccchhHHHhhhchHHHHHHH
Q psy8898         745 IHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELF  824 (1236)
Q Consensus       745 Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~  824 (1236)
                      ||+|+..|+.++|++|+++|++++.+|..|+||||+|+..++.               ....+++..+...+...+++++
T Consensus       115 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~---------------~~~~~~l~~a~~~g~~~iv~~L  179 (244)
T 3ui2_A          115 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT---------------TPKGNPMQFGRRIGLEKVINVL  179 (244)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT---------------CCCSSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc---------------cCCCCHHHHHHHcChHHHHHHH
Confidence            9999999999999999999999999999999999999864321               2234556667777777777777


Q ss_pred             HHh
Q psy8898         825 ERE  827 (1236)
Q Consensus       825 ~~~  827 (1236)
                      .+.
T Consensus       180 ~~~  182 (244)
T 3ui2_A          180 EGQ  182 (244)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            654

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.77  E-value=1.1e-19  Score=196.44  Aligned_cols=143  Identities=17%  Similarity=0.081  Sum_probs=114.8

Q ss_pred             CCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCC
Q psy8898          21 DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPM  100 (1236)
Q Consensus        21 d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~  100 (1236)
                      +.+|+||||+||..|+.++|++|++ |+++|..|..|+||||+|+..|+.++|++                         
T Consensus        42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~-------------------------   95 (244)
T 3ui2_A           42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRL-------------------------   95 (244)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHH-------------------------
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHH-------------------------
Confidence            3578899999999999999999999 89999999999999999999999999887                         


Q ss_pred             CcchhHHHhcCCCCCCcc-cCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCcc
Q psy8898         101 HKDRSCYLAHGADPFLKN-QEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQY  179 (1236)
Q Consensus       101 ~~~v~~Ll~~ga~~~~~~-~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (1236)
                            |+++|++++.++ ..|+||||+|+..|+.++++.|++.....                                
T Consensus        96 ------Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--------------------------------  137 (244)
T 3ui2_A           96 ------LAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI--------------------------------  137 (244)
T ss_dssp             ------HHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT--------------------------------
T ss_pred             ------HHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC--------------------------------
Confidence                  999999998887 78999999999999988888887642110                                


Q ss_pred             CCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc
Q psy8898         180 SGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSR  259 (1236)
Q Consensus       180 ~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~  259 (1236)
                                                  ......|.||||+|+..++.         +.        +.||||+|+..|+
T Consensus       138 ----------------------------~~~d~~g~t~l~~A~~~~~~---------~~--------~~~~l~~a~~~g~  172 (244)
T 3ui2_A          138 ----------------------------EVEDERGLTALELAREILKT---------TP--------KGNPMQFGRRIGL  172 (244)
T ss_dssp             ----------------------------TCCCTTCCCHHHHHHHHHTT---------CC--------CSSHHHHHHHHHH
T ss_pred             ----------------------------CCCCCCCCcHHHHHHHHHhc---------cC--------CCCHHHHHHHcCh
Confidence                                        00111588999999864332         22        3689999999999


Q ss_pred             HHHHHHHHhCCCC
Q psy8898         260 LEVCSLLLSEGAD  272 (1236)
Q Consensus       260 ~~iv~~Ll~~ga~  272 (1236)
                      .+++++|++++.+
T Consensus       173 ~~iv~~L~~~~~~  185 (244)
T 3ui2_A          173 EKVINVLEGQVFE  185 (244)
T ss_dssp             HHHHHHHHHHHEE
T ss_pred             HHHHHHHHHhccc
Confidence            9999999887544

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.74  E-value=5e-18  Score=192.58  Aligned_cols=129  Identities=21%  Similarity=0.217  Sum_probs=118.9

Q ss_pred             hhhccccHHHHHHHc-CCHHHHHHhhccCCcccCCC--CCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchH
Q psy8898         668 KDEFKGHCLLEACRQ-GDPSRVKKFLTSDVVNFKHP--YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAP  744 (1236)
Q Consensus       668 ~~~~~~~~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~  744 (1236)
                      ....+.++|+.|+.. |+.+++++|++.+......+  ..|+||||+|+..   ++.+++++|+++|+++|.+|..|+||
T Consensus       195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~---g~~~iv~~LL~~Gadvn~~d~~G~Tp  271 (368)
T 3jue_A          195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAA---NSLLACEFLLQNGANVNQADSAGRGP  271 (368)
T ss_dssp             --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHC---CCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence            334567899999999 99999999999988776666  6799999999997   89999999999999999999999999


Q ss_pred             HHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8898         745 IHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       745 Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~  799 (1236)
                      ||+|+..|+.++|++|+++|++++.+|..|.||||+|+..++.+++++|++++..
T Consensus       272 Lh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~  326 (368)
T 3jue_A          272 LHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR  326 (368)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred             HHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999999999999988743

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.73  E-value=3.7e-18  Score=193.64  Aligned_cols=143  Identities=24%  Similarity=0.230  Sum_probs=115.2

Q ss_pred             CCCCcchhhHHhhc-CCHHHHHHHHHCCCCCCCCC--CCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCC
Q psy8898          21 DDGGLHPLHNACSF-GHADVVRLLLEADANPNTRD--NWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTG   97 (1236)
Q Consensus        21 d~~g~t~L~~A~~~-g~~~iv~~Ll~~ga~~n~~d--~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~   97 (1236)
                      +..+.||||.|+.. |+.++|+.|+++|+++|..|  ..|.||||+|+..|+.++|++                      
T Consensus       196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~----------------------  253 (368)
T 3jue_A          196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEF----------------------  253 (368)
T ss_dssp             -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHH----------------------
T ss_pred             cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHH----------------------
Confidence            34567899999999 99999999999999999998  899999999999999999988                      


Q ss_pred             CCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCC
Q psy8898          98 CPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPA  177 (1236)
Q Consensus        98 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (1236)
                               |+++|++++..|..                                                         
T Consensus       254 ---------LL~~Gadvn~~d~~---------------------------------------------------------  267 (368)
T 3jue_A          254 ---------LLQNGANVNQADSA---------------------------------------------------------  267 (368)
T ss_dssp             ---------HHHTTCCTTCCCTT---------------------------------------------------------
T ss_pred             ---------HHHcCCCCCCCCCC---------------------------------------------------------
Confidence                     99999999876654                                                         


Q ss_pred             ccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q psy8898         178 QYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASK  257 (1236)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~  257 (1236)
                                                          |+||||+|+..|+.++|++|+++|++++..|.+|+||||+|+..
T Consensus       268 ------------------------------------G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~  311 (368)
T 3jue_A          268 ------------------------------------GRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET  311 (368)
T ss_dssp             ------------------------------------SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             ------------------------------------CCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHC
Confidence                                                55678888888999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHhCC---CCCCCCCCCCCCccccc
Q psy8898         258 SRLEVCSLLLSEG---ADPTLHNCHSKSAIDVA  287 (1236)
Q Consensus       258 g~~~iv~~Ll~~g---a~~~~~~~~g~t~l~~a  287 (1236)
                      |+.+++++|++.+   ++....+..+.|++++.
T Consensus       312 g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~  344 (368)
T 3jue_A          312 ANADIVTLLRLAKMREAEAAQGQAGDETYLDIF  344 (368)
T ss_dssp             TCHHHHHHHHHHHC-------------------
T ss_pred             CCHHHHHHHHHcCCCcccccccCCCCCCHHHHH
Confidence            9999999999876   33444556666766554

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.71  E-value=2.2e-17  Score=181.23  Aligned_cols=126  Identities=17%  Similarity=0.109  Sum_probs=114.1

Q ss_pred             CcchhhHHhhcCCHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHh---CCCceEEeeeccccCccccccccccCC
Q psy8898          24 GLHPLHNACSFGHADVVRLLLEADANP------NTRDNWNFTPLHEAAAK---GKTDVCIGIYFAEHSSKSNQYVYGIGG   94 (1236)
Q Consensus        24 g~t~L~~A~~~g~~~iv~~Ll~~ga~~------n~~d~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~~~   94 (1236)
                      ..++|+.|+..|+.+.++.|++.|+++      +..|..|+||||+|+..   |+.+++++                   
T Consensus       130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~-------------------  190 (278)
T 1dcq_A          130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDF-------------------  190 (278)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHH-------------------
T ss_pred             hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHH-------------------
Confidence            357899999999999999999999994      45588999999999999   88899887                   


Q ss_pred             CCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCC
Q psy8898          95 GTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLP  174 (1236)
Q Consensus        95 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (1236)
                                  |+++|++++.+|..                                                      
T Consensus       191 ------------Ll~~ga~in~~d~~------------------------------------------------------  204 (278)
T 1dcq_A          191 ------------LVQNSGNLDKQTGK------------------------------------------------------  204 (278)
T ss_dssp             ------------HHHHCSCTTCCCTT------------------------------------------------------
T ss_pred             ------------HHHCCCCccccCCC------------------------------------------------------
Confidence                        99999999877654                                                      


Q ss_pred             CCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q psy8898         175 PPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEA  254 (1236)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A  254 (1236)
                                                             |+||||+|+..|+.++|++|+++|++++.+|.+|+||||+|
T Consensus       205 ---------------------------------------g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A  245 (278)
T 1dcq_A          205 ---------------------------------------GSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA  245 (278)
T ss_dssp             ---------------------------------------CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             ---------------------------------------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHH
Confidence                                                   55678888888999999999999999999999999999999


Q ss_pred             HHcCcHHHHHHHHhCCCCC
Q psy8898         255 ASKSRLEVCSLLLSEGADP  273 (1236)
Q Consensus       255 ~~~g~~~iv~~Ll~~ga~~  273 (1236)
                      +..|+.+++++|+++|++.
T Consensus       246 ~~~~~~~~v~~Ll~~ga~~  264 (278)
T 1dcq_A          246 KRLKHEHCEELLTQALSGR  264 (278)
T ss_dssp             HHTTCHHHHHHHHHHHTTC
T ss_pred             HHcCCHHHHHHHHHcCCCC
Confidence            9999999999999999863

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.71  E-value=5e-18  Score=159.52  Aligned_cols=100  Identities=34%  Similarity=0.491  Sum_probs=73.6

Q ss_pred             CCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHH
Q psy8898         702 PYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRT  781 (1236)
Q Consensus       702 ~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A  781 (1236)
                      +..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus         6 d~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A   82 (115)
T 2l6b_A            6 SKDGNTPLHNAAKN---GHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA   82 (115)
T ss_dssp             SCSSCCHHHHHHHH---TCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred             CCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence            34477777777775   667777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHcCCHHHHHHHHhCCCCCCccc
Q psy8898         782 ARDDKTQAVRVLLSHNADTSIVS  804 (1236)
Q Consensus       782 ~~~~~~~iv~~Ll~~ga~~~~~~  804 (1236)
                      +..++.+++++|+++|++++..+
T Consensus        83 ~~~~~~~~~~~Ll~~ga~~n~~~  105 (115)
T 2l6b_A           83 KKNGHHEIVKLLDAKGADVNARS  105 (115)
T ss_dssp             HTTTCHHHHHHHHTTSSSHHHHS
T ss_pred             HHCCCHHHHHHHHHcCCCCCcCC
Confidence            77777777777777777766543

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.71  E-value=4.1e-17  Score=146.40  Aligned_cols=93  Identities=35%  Similarity=0.429  Sum_probs=87.5

Q ss_pred             ccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHH
Q psy8898         671 FKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAAD  750 (1236)
Q Consensus       671 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~  750 (1236)
                      +|.||||.|+..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||+|++
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~---~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~   77 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN---GHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR   77 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence            478999999999999999999999988888888899999999997   89999999999999999999999999999999


Q ss_pred             hCCHHHHHHHHHCCCC
Q psy8898         751 LGHLDVLDTLLRLGAK  766 (1236)
Q Consensus       751 ~g~~~iv~~Ll~~ga~  766 (1236)
                      .|+.+++++|+++|++
T Consensus        78 ~~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           78 NGHLEVVKLLLEAGAY   93 (93)
T ss_dssp             TTCHHHHHHHHHTTCC
T ss_pred             cCCHHHHHHHHHcCCC
Confidence            9999999999999985

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.70  E-value=1.7e-17  Score=155.91  Aligned_cols=109  Identities=29%  Similarity=0.346  Sum_probs=101.0

Q ss_pred             chhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHH
Q psy8898         667 IKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIH  746 (1236)
Q Consensus       667 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh  746 (1236)
                      .+|..|.||||.||..|+.+++++|++.+......+..|+||||+|+..   ++.+++++|+++|++++.+|..|+||||
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~d~~g~tpl~   80 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKN---GHAEIVKLLLAKGADVNARSKDGNTPEH   80 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTT---TCHHHHHHHTTTTCCTTCCCTTCCCTTH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc---CcHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence            4678899999999999999999999999887777778899999999997   7899999999999999999999999999


Q ss_pred             HHHHhCCHHHHHHHHHCCCCccccCCCCCcHH
Q psy8898         747 LAADLGHLDVLDTLLRLGAKVNLVDVLGQTAL  778 (1236)
Q Consensus       747 ~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL  778 (1236)
                      +|+..|+.+++++|+++|+++|.++..|.||-
T Consensus        81 ~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           81 LAKKNGHHEIVKLLDAKGADVNARSWGSSHHH  112 (115)
T ss_dssp             HHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred             HHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence            99999999999999999999999999999873

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.65  E-value=2.3e-16  Score=146.45  Aligned_cols=90  Identities=30%  Similarity=0.392  Sum_probs=85.0

Q ss_pred             CCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHH
Q psy8898         701 HPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHR  780 (1236)
Q Consensus       701 ~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~  780 (1236)
                      .+.+|.||||+|+..   ++.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus        20 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   96 (110)
T 2zgd_A           20 MGSDLGKKLLEAARA---GQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI   96 (110)
T ss_dssp             --CCHHHHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             cCCccchHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence            345599999999997   88999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHH
Q psy8898         781 TARDDKTQAVRVL  793 (1236)
Q Consensus       781 A~~~~~~~iv~~L  793 (1236)
                      |+..|+.+++++|
T Consensus        97 A~~~~~~~~~~~L  109 (110)
T 2zgd_A           97 SIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHTCHHHHHHH
T ss_pred             HHHcCCHHHHHHh
Confidence            9999999999987

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.59  E-value=6.6e-16  Score=143.33  Aligned_cols=93  Identities=27%  Similarity=0.318  Sum_probs=85.5

Q ss_pred             ccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCC
Q psy8898          17 IHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGT   96 (1236)
Q Consensus        17 ~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~   96 (1236)
                      ++..|.+|+||||+||..|+.++|++|+++|+++|..|..|.||||+|+..|+.+++++                     
T Consensus        17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~---------------------   75 (110)
T 2zgd_A           17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKL---------------------   75 (110)
T ss_dssp             -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH---------------------
T ss_pred             ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHH---------------------
Confidence            45568899999999999999999999999999999999999999999999999999988                     


Q ss_pred             CCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHH
Q psy8898          97 GCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDA  140 (1236)
Q Consensus        97 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l  140 (1236)
                                |+++|++++.+|..|+||||+|+..|+.++++.|
T Consensus        76 ----------Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           76 ----------LLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL  109 (110)
T ss_dssp             ----------HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             ----------HHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence                      9999999999999999999999999999999865

>3u9h_A Tankyrase-2; protein-ligand complex, diphtheria toxin like fold, transfer ribosylation; HET: SO4; 1.75A {Homo sapiens} PDB: 3kr8_A* 3kr7_A* 3p0n_A* 3p0p_A* 3p0q_A* 3mhj_A* 3u9y_A* 3ua9_A* 4avu_A* 4avw_A* 3mhk_A* 2rf5_A 3udd_A* 3uh2_A* 3uh4_A* 4dvi_A* 4hlh_A* 4hki_A* 4hkn_A* 4hl5_A* ...

Probab=97.40  E-value=0.00025  Score=73.44  Aligned_cols=110  Identities=74%  Similarity=1.233  Sum_probs=85.7

Q ss_pred             CCcceeeccCCChhhhhHHHHHHHHHHhhccCCCCCCccccceeeeehhhchhhHHHHHHHHHHHHhhhcCCcchhhhhc
Q psy8898         872 PGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLF  951 (1236)
Q Consensus       872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  951 (1236)
                      .+..+..+-..+.++..+.+.+......++..+..++.+..+.+.+|.+++++..|++|..++..+...+..        
T Consensus        29 ~~~~l~~L~~~s~Ey~~V~~~f~~T~~~~~~~~~~~~~~~~~~I~~I~rIqn~~l~~~y~~~k~~m~~~~~~--------  100 (240)
T 3u9h_A           29 SGTILIDLSPDDKEFQSVEEEMQSTVREHRDGGHAGGIFNRYNILKIQKVCNKKLWERYTHRRKEVSEENHN--------  100 (240)
T ss_dssp             -CCEEEECCTTSHHHHHHHHHHHHTCCCCTTTTTTTCSCSCEEEEEEEEEECHHHHHHHHHHHHHHHHTTTT--------
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHhcccccccccccccccCCcEEEEEEEecCHhHHHHHHHHHHHHHHhcCC--------
Confidence            456788888899999999988887665555544456666788889999999999999998877655543322        


Q ss_pred             cCCchhhhhhhcccchhhHHHHhhhhhhhhcccCccchhhhhccCchHHHHHHhcCcccccccccccccccce
Q psy8898         952 HGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKR 1024 (1236)
Q Consensus       952 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 1024 (1236)
                                                         ..+++.++||.+.+..|+..||+.....-+++|+.|+|
T Consensus       101 -----------------------------------~~ne~~LfHGt~~~~~I~~~Gf~~~~~~~g~~~G~GiY  138 (240)
T 3u9h_A          101 -----------------------------------HANERMLFHGSPFVNAIIHKGFDERHAYIGGMFGAGIY  138 (240)
T ss_dssp             -----------------------------------CCCEEEEEECCTTHHHHHHHCCCGGGCBTTSTTCSBEE
T ss_pred             -----------------------------------CCceEEEEechHhHHHHHHcCCCcccccCCCcceeeEE
Confidence                                               23688889999999999999999876656789999999

>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens}

Probab=93.46  E-value=0.12  Score=44.85  Aligned_cols=80  Identities=23%  Similarity=0.333  Sum_probs=59.7

Q ss_pred             HHhCCCCCCcccccchhHHHhhhchHHHHHHHHHhcCC-HHHHhhcChhhhhhhCcccchhhhhhHHHHHHhhcCCCCCC
Q psy8898         793 LLSHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPSFSQ  871 (1236)
Q Consensus       793 Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  871 (1236)
                      |++.+..........+..+-...++.++.+.|.+.++. ++.+..+..++++.+|++..|.+.++++.+..+.......+
T Consensus        14 ~~~~~~~m~~~~~~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~Lt~eDLkeLGIt~~GhRkkIL~aI~~Lr~~~~~~p   93 (100)
T 2kg5_A           14 LVPRGSHMAAPQDLDIAVWLATVHLEQYADTFRRHGLATAGAARGLGHEELKQLGISATGHRKRILRLLQTGTEEGSLDP   93 (100)
T ss_dssp             ------CCSCCTTCBHHHHHGGGTCGGGHHHHHHTTCCBHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHTTTTTCCCSCC
T ss_pred             cccCccccCCCCcChHHHHHHHCCCHHHHHHHHHcCCChHHHHHhcCHHHHHHCCCCChhHHHHHHHHHHHHHhcccCCC
Confidence            44444444433344556667777888999999999999 99999999999999999999999999999988776544433


Q ss_pred             C
Q psy8898         872 P  872 (1236)
Q Consensus       872 ~  872 (1236)
                      .
T Consensus        94 ~   94 (100)
T 2kg5_A           94 K   94 (100)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.20  E-value=1.6  Score=36.91  Aligned_cols=58  Identities=17%  Similarity=0.322  Sum_probs=50.6

Q ss_pred             chhHHHhhhchHHHHHHHHHhcCC-HHHHhhcChhhhhhhCcccchhhhhhHHHHHHhh
Q psy8898         807 VIFSCSTNLGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLC  864 (1236)
Q Consensus       807 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  864 (1236)
                      .+..+-...++.++.+.|.+.++. ++.+..+..++++.+|++..+++.++++.+..+.
T Consensus        14 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhRkkIl~ai~~l~   72 (88)
T 2e8n_A           14 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDVKRIGVRLPGHQKRIAYSLLGLK   72 (88)
T ss_dssp             SHHHHHHHTTCGGGHHHHHHHTCSSHHHHTTSCTTHHHHTTCCSHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHHHH
Confidence            344556677788899999999999 9999999999999999999999999999887765

>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}

Probab=82.37  E-value=1.5  Score=36.39  Aligned_cols=58  Identities=17%  Similarity=0.330  Sum_probs=50.0

Q ss_pred             hhHHHhhhchHHHHHHHHHhcCC-HHHHhhcChhhhhhhCcccchhhhhhHHHHHHhhc
Q psy8898         808 IFSCSTNLGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCS  865 (1236)
Q Consensus       808 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  865 (1236)
                      +...-...+..++.+.|.+.++. ++.+..+..++++.+|++..|.+.+++..+..+..
T Consensus        19 V~~WL~~lgL~qY~~~F~~~gid~~~~L~~lt~~DL~~lGI~~~GhRkkIl~ai~~Lr~   77 (82)
T 2kso_A           19 VSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLGLKD   77 (82)
T ss_dssp             HHHHHHHTTCTTHHHHHHHTTCCSHHHHTTCCHHHHHHHHCCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence            34455667788889999999999 99999999999999999999999999998877643

>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}

Probab=82.15  E-value=2.1  Score=36.21  Aligned_cols=58  Identities=17%  Similarity=0.327  Sum_probs=50.4

Q ss_pred             chhHHHhhhchHHHHHHHHHhcCC-HHHHhhcChhhhhhhCcccchhhhhhHHHHHHhh
Q psy8898         807 VIFSCSTNLGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLC  864 (1236)
Q Consensus       807 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  864 (1236)
                      .+..+-...+..++.+.|.+.++. ++.+..+..++++.+|++..|.+.+++..+..+.
T Consensus        27 ~V~~WL~~lgL~qY~~~F~~~g~d~~e~l~~lt~~DL~~lGIt~~GHRkkIL~ai~~Lr   85 (90)
T 3h8m_A           27 SVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITLVGHQKKIMSSIQTMR   85 (90)
T ss_dssp             SHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCChHHHHHHHHHcCCChHHHHhhCCHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence            344555677888899999999999 9999999999999999999999999999887754

>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2

Probab=82.13  E-value=1.9  Score=35.75  Aligned_cols=58  Identities=17%  Similarity=0.374  Sum_probs=50.3

Q ss_pred             hhHHHhhhchHHHHHHHHHhcCC-HHHHhhcChhhhhhhCcccchhhhhhHHHHHHhhc
Q psy8898         808 IFSCSTNLGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCS  865 (1236)
Q Consensus       808 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  865 (1236)
                      +..+-...+..++.+.|.++++. ++.+..+..+|++.+|++..+++.+++..+..+..
T Consensus        10 V~~WL~~lgL~~Y~~~F~~~~~d~~~~l~~lt~~DL~~lGI~~~GhrkkIl~ai~~l~~   68 (81)
T 1ucv_A           10 VGDWLDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDVRALGITLMGHQKKILGSIQTMRA   68 (81)
T ss_dssp             HHHHHHHTTCGGGHHHHHHTTCCBHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCChHHHHHHcCHHHHHhCCCCChhHHHHHHHHHHHHHH
Confidence            34455667788889999999999 99999999999999999999999999998887653

>3hkv_A PARP-10, poly [ADP-ribose] polymerase 10; NAD, transferase, structural genomics, structural genomics consortium, SGC, cytoplasm, glycosyltransferase; HET: 3AB; 2.10A {Homo sapiens}

Probab=81.39  E-value=2.6  Score=42.58  Aligned_cols=98  Identities=21%  Similarity=0.358  Sum_probs=70.2

Q ss_pred             ceeeccCCChhhhhHHHHHHHHHHhhccCCCCCCccccceeeeehhhchhhHHHHHHHHHHHHhhhcCCcchhhhhccCC
Q psy8898         875 LLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQAHERMLFHGS  954 (1236)
Q Consensus       875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  954 (1236)
                      .+..+-..+.++..+...+.......         ...+.+..|.+++++..|++|..++..+...++..          
T Consensus        12 ~L~~L~~~s~Ey~~V~~~F~~t~~~~---------~~~~~I~~I~RIqn~~l~~~f~~~k~~m~~k~~~~----------   72 (217)
T 3hkv_A           12 NLERLAENTGEFQEVVRAFYDTLDAA---------RSSIRVVRVERVSHPLLQQQYELYRERLLQRCERR----------   72 (217)
T ss_dssp             CEEECCSSSHHHHHHHHHHHHTTGGG---------GGTEEEEEEEEECCHHHHHHHHHHHHHHHHHCCSS----------
T ss_pred             cceECCCCChHHHHHHHHHHhhcCCc---------CCCceEEEEEEECChhHHHHHHHHHHHHHHhcCCC----------
Confidence            46667778889988887777554322         13456778888999999999988776655444332          


Q ss_pred             chhhhhhhcccchhhHHHHhhhhhhhhcccCccchhhhhccCch--HHHHHHhcCccccccc-ccccccccce
Q psy8898         955 PFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSP--FINAIVQKGFDERHAY-IGGMFGAGKR 1024 (1236)
Q Consensus       955 ~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~-~~~~~~~~~~ 1024 (1236)
                                                       .+++.++||..  .+..|+..||+..+.- -+++||.|+|
T Consensus        73 ---------------------------------~ne~~LfHGt~~~~~~~I~~~GF~~~~~g~~g~~~G~GiY  112 (217)
T 3hkv_A           73 ---------------------------------PVEQVLYHGTTAPAVPDICAHGFNRSFCGRNATVYGKGVY  112 (217)
T ss_dssp             ---------------------------------CSEEEEEEEECGGGHHHHHHHCSCTTTSCCCCCTTCSSEE
T ss_pred             ---------------------------------CceEEEEeCCCHHHHHHHHhcCCcccccCcchhcccccee
Confidence                                             25677777776  4888999999865432 2679999999

>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A

Probab=81.06  E-value=2.2  Score=35.51  Aligned_cols=58  Identities=22%  Similarity=0.390  Sum_probs=49.8

Q ss_pred             chhHHHhhhchHHHHHHHHHhcC-CHHHHhhcChhhhhhhCcccchhhhhhHHHHHHhh
Q psy8898         807 VIFSCSTNLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLC  864 (1236)
Q Consensus       807 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  864 (1236)
                      .+...-...+..++.+.|.+.++ .++.+..+..++++.+|++..|++.+++..+..+.
T Consensus        13 ~v~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhrkkIl~ai~~l~   71 (82)
T 1b4f_A           13 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKILNSIQVMR   71 (82)
T ss_dssp             SHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHcCCCCHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            34445567778888999999999 79999999999999999999999999999887654

>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens}

Probab=81.02  E-value=1.7  Score=35.23  Aligned_cols=53  Identities=25%  Similarity=0.417  Sum_probs=46.1

Q ss_pred             HHhhhchHHHHHHHHHhcCCHHHHhhcChhhhhhhCcccchhhhhhHHHHHHhh
Q psy8898         811 CSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLC  864 (1236)
Q Consensus       811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  864 (1236)
                      +-...+..++.+.|.++++.++.+..+..++++.+|+. .|.+.+++..+....
T Consensus         8 wL~~lgL~~Y~~~F~~~~id~e~l~~lt~~DL~~lGI~-~G~RkkIl~ai~~~~   60 (74)
T 3k1r_B            8 FLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVP-LGPREKILGAVRRRR   60 (74)
T ss_dssp             HHHTTTCGGGHHHHHHTTCCHHHHTTCCHHHHHHTTCC-HHHHHHHHHHHHHHH
T ss_pred             HHHHCCCHHHHHHHHHcCcCHHHHhHCCHHHHHHcCCC-cchHHHHHHHHHHHH
Confidence            34556777888899999999999999999999999999 999999998886654

>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=80.66  E-value=2.2  Score=36.98  Aligned_cols=60  Identities=20%  Similarity=0.374  Sum_probs=51.9

Q ss_pred             chhHHHhhhchHHHHHHHHHhcCC-HHHHhhcChhhhhhhCcccchhhhhhHHHHHHhhcC
Q psy8898         807 VIFSCSTNLGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSS  866 (1236)
Q Consensus       807 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  866 (1236)
                      .+..+-...++.++.+.|.++++. ++.+..+..++++.+|++..+++.++++.+..+...
T Consensus        24 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~L~~lt~~DL~~lGI~~~GhRkkIl~ai~~l~~~   84 (99)
T 2eao_A           24 TVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGITLAGHQKKILNSIHSMRVQ   84 (99)
T ss_dssp             BHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCcHHHHHHHHHcCCChHHHHhhCCHHHHHHCCCCChhHHHHHHHHHHHHHHH
Confidence            344566677788899999999999 999999999999999999999999999998877643

>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2

Probab=80.45  E-value=2.1  Score=36.77  Aligned_cols=58  Identities=17%  Similarity=0.359  Sum_probs=50.2

Q ss_pred             chhHHHhhhchHHHHHHHHHhcC-CHHHHhhcChhhhhhhCcccchhhhhhHHHHHHhh
Q psy8898         807 VIFSCSTNLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLC  864 (1236)
Q Consensus       807 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  864 (1236)
                      .+..+-...+..++.+.|.++++ .++.+..+..++++.+|++..|++.+++..+..+.
T Consensus        28 ~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~lt~~DL~~lGI~~~GhrkkIl~ai~~L~   86 (94)
T 1b0x_A           28 SVGDWLQAIKMDRYKDNFTAAGYTTLEAVVHMSQDDLARIGITAITHQNKILSSVQAMR   86 (94)
T ss_dssp             CHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCcHHHHHHHHHcCCCCHHHHhhCCHHHHHHCCCCChhHHHHHHHHHHHHH
Confidence            34455667778889999999999 89999999999999999999999999999887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	1236
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-48
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-41
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-35
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-35
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-31
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	7e-30
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-29
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-26
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-25
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-14
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-13
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-10
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-10
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-09
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-29
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-28
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	6e-22
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-21
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	4e-18
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-13
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-11
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	4e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-09
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	6e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-05
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	4e-04
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-24
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-22
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-19
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-19
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-13
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-11
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	4e-11
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	7e-11
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	8e-07
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	5e-05
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	8e-04
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-24
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-22
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-20
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	4e-16
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-14
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-12
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-09
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	8e-08
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-06
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-05
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-04
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	4e-04
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	0.002
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-22
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-20
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	3e-17
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-16
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-12
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-09
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-09
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	8e-09
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-08
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	0.004
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	8e-22
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-18
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-14
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-14
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	9e-13
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	7e-12
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	9e-10
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-06
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	6e-06
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	4e-04
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	0.004
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	4e-21
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	5e-21
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-20
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-15
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-09
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-08
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	6e-08
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	4e-06
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-05
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-05
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-04
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-19
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	7e-18
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-14
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	6e-13
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-11
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	6e-10
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	7e-09
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-08
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	9e-08
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-07
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-04
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	0.001
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-19
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	9e-18
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-17
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-15
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-15
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-13
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-11
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-09
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-08
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-08
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-07
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-06
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-04
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-04
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.002
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-17
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-16
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-16
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-13
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-07
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-06
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-06
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-05
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-05
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-05
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-04
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	4e-16
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-12
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-08
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	6e-08
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-06
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-06
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	7e-06
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	9e-06
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	3e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	4e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	5e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-04
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	7e-04
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-15
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-14
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	8e-14
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-11
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-09
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-08
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	4e-08
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	6e-08
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-07
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-06
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	6e-05
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	0.001
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	0.002
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	6e-10
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	7e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-08
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	6e-05
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-04
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-04
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	0.001
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	8e-10
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	3e-06
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	1e-05
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	8e-05
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	1e-04
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	0.002
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	0.003
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	0.003
d2f3na1	64	a.60.1.2 (A:2-65) Sh3 and multiple ankyrin repeat	9e-09
d1ucva_	81	a.60.1.2 (A:) Ephrin type-A receptor 8, C-terminal	1e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	8e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	1e-04
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-04
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	6e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-08
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-06
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	7e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	9e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	0.002
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	9e-08
d1v38a_	78	a.60.1.2 (A:) Sam-domain protein samsn-1 {Mouse (M	9e-08
d1x40a1	78	a.60.1.2 (A:8-85) Centaurin-delta 1 (Arap2) {Human	3e-07
d1dxsa_	57	a.60.1.2 (A:) C-terminal domain of p73 {Human (Hom	4e-07
d1pk3a1	63	a.60.1.2 (A:17-79) Polycomb protein Scm {Fruit fly	6e-07
d1gs0a2	217	d.166.1.2 (A:341-557) Poly(ADP-ribose) polymerase,	7e-07
d1gs0a2	217	d.166.1.2 (A:341-557) Poly(ADP-ribose) polymerase,	8e-04
d1gs0a2	217	d.166.1.2 (A:341-557) Poly(ADP-ribose) polymerase,	0.002
d1b0xa_	72	a.60.1.2 (A:) EphA4 receptor tyrosine kinases {Mou	7e-07
d1efya2	215	d.166.1.2 (A:797-1011) Poly(ADP-ribose) polymerase	8e-07
d1efya2	215	d.166.1.2 (A:797-1011) Poly(ADP-ribose) polymerase	1e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	9e-07
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-06
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	1e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	3e-05
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	4e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	4e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	6e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	8e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	0.001
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	0.001
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	0.001
d1kw4a_	70	a.60.1.2 (A:) Polyhomeotic {Drosophila melanogaste	2e-06
d1ow5a_	60	a.60.1.2 (A:) Serine/threonine-protein kinase ste1	2e-06
d1b4fa_	74	a.60.1.2 (A:) EphB2 receptor {Human (Homo sapiens)	3e-06
d1oxja1	62	a.60.1.2 (A:594-655) RNA-binding protein Smaug {Dr	5e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	8e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	4e-04
d1wwva1	78	a.60.1.2 (A:8-85) Connector enhancer of kinase sup	0.001
d2d8ca1	85	a.60.1.2 (A:7-91) Sphingomyelin synthase 1, SMS1 {	0.003

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (441), Expect = 8e-48
 Identities = 103/412 (25%), Positives = 147/412 (35%), Gaps = 30/412 (7%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L  AS  G + +V  LL       N  ++     TPLH AA      V +YLL + A V 
Sbjct: 4   LHVASFMGHLPIVKNLLQRGAS-PNVSNVKVE--TPLHMAARAGHTEVAKYLLQNKAKV- 59

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
              NA  K   TPLH AA+ G T +  LL  + +  N                   + V 
Sbjct: 60  ---NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVL 116

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH 582
                    A           G  PLH A  YG   V E+L++  A+ N A     TPLH
Sbjct: 117 ALLEKEASQACMTKK------GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLH 170

Query: 583 EAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMG 635
            A         K LL  G   +    +G T L +A    +           LL+      
Sbjct: 171 VAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQV-----EVARSLLQYGGSAN 225

Query: 636 GGLHRYTWPLGTTDIGWCSCCCKMELMFMPR--IKDEFKGHCLLEACRQGDPSRVKKFLT 693
               +   PL        +    + L       + ++     L    ++G        + 
Sbjct: 226 AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK 285

Query: 694 SDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGH 753
             V+       G TPLH    + +     +V+ L++  A +N K K   +P+H AA  GH
Sbjct: 286 HGVMVDATTRMGYTPLHV---ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGH 342

Query: 754 LDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSL 805
            D++  LL+ GA  N V   G T L    R        VL     +TS V +
Sbjct: 343 TDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLV 394

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 1e-41
 Identities = 97/485 (20%), Positives = 149/485 (30%), Gaps = 99/485 (20%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSN 86
           PLH A   GH  +V+ LL+  A+PN  +    TPLH AA  G T+V              
Sbjct: 3   PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVA------------- 49

Query: 87  QYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVA---EDVRSLLQDAMAQ 143
                                L + A    K ++ QTPL         ++  LL +  A 
Sbjct: 50  ------------------KYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNAN 91

Query: 144 YPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETV 203
              A +   T       +    +    +            G                   
Sbjct: 92  PNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGF------------------ 133

Query: 204 IMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVC 263
                        PLH A  YG   V E+L++  A+ NA      TPLH A   + L++ 
Sbjct: 134 ------------TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIV 181

Query: 264 SLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTS 323
            LLL  G  P     +  +                      L  A +Q      +  L  
Sbjct: 182 KLLLPRGGSPHSPAWNGYTP---------------------LHIAAKQNQVEVARSLLQY 220

Query: 324 DVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAG 383
                     G TP    L +       E + +    QA       +G +  +   Q   
Sbjct: 221 GGSANAESVQGVTP----LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGH 276

Query: 384 ENSKKLLQEPPSVVDLESQL----LEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPL 439
                +L +   +VD  +++    L  +       + + L      VN +   G   +PL
Sbjct: 277 VPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGY--SPL 334

Query: 440 HFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAAN 499
           H AA      +V  LL +GA      N     G TPL  A + G   ++ +L +     +
Sbjct: 335 HQAAQQGHTDIVTLLLKNGASP----NEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETS 390

Query: 500 DPLRE 504
             L  
Sbjct: 391 FVLVS 395

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (346), Expect = 2e-35
 Identities = 99/409 (24%), Positives = 146/409 (35%), Gaps = 83/409 (20%)

Query: 215 LVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPT 274
           L PLH A   GH  + + L++ GA+ N  ++   TPLH AA     EV   LL   A   
Sbjct: 1   LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 60

Query: 275 LHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTG 334
                 ++                      L  A R G  + VK  L ++         G
Sbjct: 61  AKAKDDQTP---------------------LHCAARIGHTNMVKLLLENNANPNLATTAG 99

Query: 335 DTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPP 394
            TPL            +E               +      G+T L V             
Sbjct: 100 HTPLHIA--------AREGHVETVLALLEKEASQACMTKKGFTPLHV------------- 138

Query: 395 SVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYL 454
                      A+K G + V   LL    H  N    +G    PLH A  +N + +V+ L
Sbjct: 139 -----------AAKYGKVRVAELLLERDAHP-NAAGKNGLT--PLHVAVHHNNLDIVKLL 184

Query: 455 LAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL----PLSPSAANDPLRELFEACK 510
           L  G       ++    G+TPLH AA++ + +++  L      + + +   +  L  A +
Sbjct: 185 LPRGGSP----HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ 240

Query: 511 GGDLTKVKKLVNPQT-VNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGAN 569
            G    V  L++ Q   N  + +G             PLH     GH  V ++L+KHG  
Sbjct: 241 EGHAEMVALLLSKQANGNLGNKSGL-----------TPLHLVAQEGHVPVADVLIKHGVM 289

Query: 570 VNVADLWKFTPLH-------EAAAKALLQHGADINLKNTDGKTALDLAV 611
           V+      +TPLH           K LLQH AD+N K   G + L  A 
Sbjct: 290 VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAA 338

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 5e-35
 Identities = 95/422 (22%), Positives = 148/422 (35%), Gaps = 77/422 (18%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
              PLH A   GH EV + L++  A VNA      TPLH AA      +  LLL   A+P
Sbjct: 33  VETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANP 92

Query: 274 TLHNCHSKSAIDVA------------PTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFL 321
            L      + + +A              +E  Q    +     L  A + G     +  L
Sbjct: 93  NLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL 152

Query: 322 TSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQV 381
             D         G TP    L + +  ++ + + +      +      NG +  + A + 
Sbjct: 153 ERDAHPNAAGKNGLTP----LHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQ 208

Query: 382 AGENSKKLLQEPPSVVDLESQ-----LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHS 436
                 + L +     + ES      L  A++ G   +V  LL S     N  +  G   
Sbjct: 209 NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV-ALLLSKQANGNLGNKSGL-- 265

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPS 496
           TPLH  A    V V + L+ HG  V    +AT + G+TPLH A+  G  +L   L     
Sbjct: 266 TPLHLVAQEGHVPVADVLIKHGVMV----DATTRMGYTPLHVASHYGNIKLVKFLL---- 317

Query: 497 AANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGH 556
                                    +   VNA+   G   +PLH AA           GH
Sbjct: 318 ------------------------QHQADVNAKTKLGY--SPLHQAA---------QQGH 342

Query: 557 YEVTEMLVKHGANVNVADLWKFTPLHEAAA----------KALLQHGADINLKNTDGKTA 606
            ++  +L+K+GA+ N       TPL  A            K +    + + + +    + 
Sbjct: 343 TDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF 402

Query: 607 LD 608
            +
Sbjct: 403 PE 404

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 1e-31
 Identities = 61/263 (23%), Positives = 95/263 (36%), Gaps = 52/263 (19%)

Query: 545 LVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADIN 597
           L PLH A   GH  + + L++ GA+ NV+++   TPLH AA       AK LLQ+ A +N
Sbjct: 1   LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 60

Query: 598 LKNTDGKTALDLAVPCTRAVLSGDHKKEELL---EAARMMGGGLHRYTWPLGTTDIGWCS 654
            K  D +T L  A         G     +LL    A   +          +   +    +
Sbjct: 61  AKAKDDQTPLHCAA------RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVET 114

Query: 655 CCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVT 714
               +E         +     L  A + G                               
Sbjct: 115 VLALLEKEASQACMTKKGFTPLHVAAKYG------------------------------- 143

Query: 715 SPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLG 774
                +  + E L+ + AH N   K  L P+H+A    +LD++  LL  G   +     G
Sbjct: 144 -----KVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNG 198

Query: 775 QTALHRTARDDKTQAVRVLLSHN 797
            T LH  A+ ++ +  R LL + 
Sbjct: 199 YTPLHIAAKQNQVEVARSLLQYG 221

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 7e-30
 Identities = 74/362 (20%), Positives = 120/362 (33%), Gaps = 28/362 (7%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G   +V+ LL  GAS +  +     PLH A   GH +V + LL+  A  N +   + TP
Sbjct: 10  MGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTP 69

Query: 61  LHEAAAKGKTDVCIGI--YFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKN 118
           LH AA  G T++   +    A  +  +      +         +     L   A      
Sbjct: 70  LHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMT 129

Query: 119 QEGQTPLDLTVAED----VRSLLQ-----DAMAQYPGAPSCAETASVPPPSQYSNTSCGD 169
           ++G TPL +            LL+     +A  +    P                   G 
Sbjct: 130 KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG 189

Query: 170 NVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEV 229
           +   P    ++G     ++          +L      +      G+ PLH A   GH E+
Sbjct: 190 SPHSP---AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEM 246

Query: 230 TEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPT 289
             +L+   AN N  +    TPLH  A +  + V  +L+  G           + + VA  
Sbjct: 247 VALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASH 306

Query: 290 RELQQRLSNEFKGHC------------LLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDT 336
               + +    +               L +A +QG    V   L +    N      G T
Sbjct: 307 YGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSD-GTT 365

Query: 337 PL 338
           PL
Sbjct: 366 PL 367

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (298), Expect = 4e-29
 Identities = 88/426 (20%), Positives = 159/426 (37%), Gaps = 47/426 (11%)

Query: 707  TPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAK 766
            TPLH A    +     IV++L+++GA  N  N ++  P+H+AA  GH +V   LL+  AK
Sbjct: 2    TPLHVAS---FMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK 58

Query: 767  VNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLLVIFSCSTNLGLKHLLELFER 826
            VN      QT LH  AR   T  V++LL +NA+ ++ +              H+  +   
Sbjct: 59   VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL 118

Query: 827  EQITLDILAEMNHEDLKQVGVSAYGYRH--KLLKGIEKLCSSPSFSQPGTLLIDLLSDDK 884
             +                   + YG     +LL   +   ++   +    L + +  ++ 
Sbjct: 119  LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL 178

Query: 885  EFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADENGGQ 944
            + + +      +      NG        Y  + I   QN+    R +        + GG 
Sbjct: 179  DIVKLLLPRGGSPHSPAWNG--------YTPLHIAAKQNQVEVARSLL-------QYGGS 223

Query: 945  AHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADENGGQAHERMLFHGSPFINAIV 1004
            A+   +   +P   A  +   +    +        + +++G      +   G   +  ++
Sbjct: 224  ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVL 283

Query: 1005 QKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLETGTKKKKKNMYYGTLTPHNV 1064
                                     +K GV   +      T             +     
Sbjct: 284  -------------------------IKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQ 318

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQD 1123
                +VN      ++PLH+AA +G  DIV LLL++GA P++ + DG TPL +  R G   
Sbjct: 319  HQA-DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYIS 377

Query: 1124 VSDLLR 1129
            V+D+L+
Sbjct: 378  VTDVLK 383

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 1e-26
 Identities = 68/298 (22%), Positives = 103/298 (34%), Gaps = 46/298 (15%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
           YG+  V E LL   A  +A    GL PLH A    + D+V+LLL    +P++     +TP
Sbjct: 142 YGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTP 201

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGT------GCPMHKDRSCYLAHGADP 114
           LH AA + + +V   +         +     + G T           +  +  L+  A+ 
Sbjct: 202 LHIAAKQNQVEVARSL----LQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG 257

Query: 115 FLKNQEGQTPLDLTVAE---DVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNV 171
            L N+ G TPL L   E    V  +L               T    P    S+      V
Sbjct: 258 NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYT----PLHVASHYGNIKLV 313

Query: 172 SLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTE 231
                 Q   +                              LG  PLH A   GH ++  
Sbjct: 314 KFLLQHQADVNAKTK--------------------------LGYSPLHQAAQQGHTDIVT 347

Query: 232 MLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLL---LSEGADPTLHNCHSKSAIDV 286
           +L+K GA+ N +     TPL  A     + V  +L     E +   + + H  S  + 
Sbjct: 348 LLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPET 405

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 2e-25
 Identities = 99/506 (19%), Positives = 155/506 (30%), Gaps = 123/506 (24%)

Query: 249 TPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEA 308
           TPLH A+    L +   LL  GA P + N   ++                      L  A
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETP---------------------LHMA 40

Query: 309 CRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREH 367
            R G     K  L +   VN K      TPL               + +  E  A     
Sbjct: 41  ARAGHTEVAKYLLQNKAKVNAKAKD-DQTPL----HCAARIGHTNMVKLLLENNANPNLA 95

Query: 368 RDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQ-----LLEASKGGDMTVVTRLLSSC 422
              G +  + A +     +   L E  +     ++     L  A+K G + V   LL   
Sbjct: 96  TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD 155

Query: 423 PHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQK 482
            H  N    +G    PLH A  +N + +V+ LL  G       ++    G+TPLH AA++
Sbjct: 156 AHP-NAAGKNGLT--PLHVAVHHNNLDIVKLLLPRGGSP----HSPAWNGYTPLHIAAKQ 208

Query: 483 GRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFA 542
            + +++  L                            L    + NA    G         
Sbjct: 209 NQVEVARSL----------------------------LQYGGSANAESVQGV-------- 232

Query: 543 AGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA-------AAKALLQHGAD 595
               PLH A   GH E+  +L+   AN N+ +    TPLH          A  L++HG  
Sbjct: 233 ---TPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM 289

Query: 596 INLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSC 655
           ++     G T L                               H  +       + +   
Sbjct: 290 VDATTRMGYTPL-------------------------------HVASHYGNIKLVKFLLQ 318

Query: 656 CCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLHCAVT 714
                       K +     L +A +QG    V   L +    N      G TPL  A  
Sbjct: 319 HQ-----ADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSD-GTTPLAIAKR 372

Query: 715 SPYPKRKAIVESLIRKGAHLNEKNKE 740
             Y     +++ +  + + +   +K 
Sbjct: 373 LGYISVTDVLKVVTDETSFVLVSDKH 398

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (182), Expect = 2e-14
 Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 49/156 (31%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQ 1122
            ++ GA+ NV+++   TPLH AA  G  ++ + LLQ+ A  + K +D  TPL    R G  
Sbjct: 20   LQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHT 79

Query: 1123 DVSDLL---------------------------------------------RGNSALLDA 1137
            ++  LL                                             +G + L  A
Sbjct: 80   NMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVA 139

Query: 1138 AKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAA 1172
            AK G +   + LL  D + N     G    PLH+A 
Sbjct: 140  AKYGKVRVAELLLERDAHPNAAGKNGLT--PLHVAV 173

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 2e-13
 Identities = 36/131 (27%), Positives = 50/131 (38%), Gaps = 24/131 (18%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDAA 1138
            TPLH A+  G   IV+ LLQ GA P+  N    TPL +                    AA
Sbjct: 2    TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHM--------------------AA 41

Query: 1139 KKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKM 1197
            + G+    + LL     +N +    +  TPLH AA    H  M ++ L  +     A   
Sbjct: 42   RAGHTEVAKYLLQNKAKVNAKAKDDQ--TPLHCAA-RIGHTNMVKLLLENNANPNLATTA 98

Query: 1198 AHAPPGHHSVM 1208
             H P    +  
Sbjct: 99   GHTPLHIAARE 109

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 4e-10
 Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 16/122 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPL--------- 1114
            ++  A+ N A     TPLH A      DIV+LLL  G  P     +G TPL         
Sbjct: 152  LERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQV 211

Query: 1115 ----DLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTADN-INCRDAQGRNSTPLH 1169
                 L++ G    ++ ++G + L  AA++G+   V  LL+     N  +  G   TPLH
Sbjct: 212  EVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGL--TPLH 269

Query: 1170 LA 1171
            L 
Sbjct: 270  LV 271

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (144), Expect = 8e-10
 Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 17/131 (12%)

Query: 1062 HNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGD 1121
              +   AN N+ +    TPLH  A +G   +  +L++HG       R G TPL +     
Sbjct: 249  LLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYG 308

Query: 1122 QDVSDLLR-------------GNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTP 1167
                                 G S L  AA++G+   V  LL    + N   + G   TP
Sbjct: 309  NIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGT--TP 366

Query: 1168 LHLAAGEKRHL 1178
            L +A     ++
Sbjct: 367  LAIAK-RLGYI 376

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (142), Expect = 2e-09
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 14/133 (10%)

Query: 1053 NMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGAT 1112
               +       ++  A+        FTPLH AA  GK  +  LLL+  A P+   ++G T
Sbjct: 108  REGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLT 167

Query: 1113 PLDL-VREGDQDVSDLLR------------GNSALLDAAKKGNLGRVQKLLTADNINCRD 1159
            PL + V   + D+  LL             G + L  AAK+  +   + LL        +
Sbjct: 168  PLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAE 227

Query: 1160 AQGRNSTPLHLAA 1172
            +  +  TPLHLAA
Sbjct: 228  SV-QGVTPLHLAA 239

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 2e-29
 Identities = 80/364 (21%), Positives = 119/364 (32%), Gaps = 92/364 (25%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMD-LWQFTPLHEAASKSRLEVCSLLLSEGADPTL 275
            L  A      ++ + L++ GANVN  +    +TPLH A   SR ++  LLL  GADP L
Sbjct: 8   LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67

Query: 276 HNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGD 335
              +                          L A   G    +K FL+      +  + G 
Sbjct: 68  RKKNGA---------------------TPFLLAAIAGSVKLLKLFLSKGADVNECDFYGF 106

Query: 336 TPLPGTLLIDLLSDDKEFI--TVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEP 393
           T      +   +   K          ++   +E ++  + GG TAL  A E         
Sbjct: 107 TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK-------- 158

Query: 394 PSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRV--AVV 451
                           G + V+  LL      VN  D  GR++      +  +    A+ 
Sbjct: 159 ----------------GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAIT 202

Query: 452 EYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKG 511
             LL HGADV    N   + G TPL  A +K    L   L L                  
Sbjct: 203 HLLLDHGADV----NVRGERGKTPLILAVEKKHLGLVQRL-LEQEHIE------------ 245

Query: 512 GDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVN 571
                         +N  D+ G+  T L  A               ++ E+L K GA+ +
Sbjct: 246 --------------INDTDSDGK--TALLLAV---------ELKLKKIAELLCKRGASTD 280

Query: 572 VADL 575
             DL
Sbjct: 281 CGDL 284

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 3e-28
 Identities = 59/278 (21%), Positives = 101/278 (36%), Gaps = 18/278 (6%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVAD-LWKFTPLHEAA-------AKALLQHGADINL 598
            L  A      ++ + L++ GANVN  +    +TPLH A         + LL+HGAD  L
Sbjct: 8   LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67

Query: 599 KNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGG-------LHRYTWPLGTTDIG 651
           +  +G T   LA       L      +          G        ++     L      
Sbjct: 68  RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR 127

Query: 652 WCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSD--VVNFKHPYTGDTPL 709
             +   + +         +     L++A  +G    +K  L      VN       +  +
Sbjct: 128 GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALI 187

Query: 710 HCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLL-RLGAKVN 768
           H  ++S     +AI   L+  GA +N + +    P+ LA +  HL ++  LL +   ++N
Sbjct: 188 HALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 247

Query: 769 LVDVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSLL 806
             D  G+TAL         +   +L    A T    L+
Sbjct: 248 DTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLV 285

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.4 bits (236), Expect = 6e-22
 Identities = 62/340 (18%), Positives = 108/340 (31%), Gaps = 64/340 (18%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPS 496
             L  A     V +V+ LL  GA+V+ ++   ++ G+TPLH A Q  R  +  L      
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQE---EEGGWTPLHNAVQMSREDIVEL------ 57

Query: 497 AANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGH 556
                   +     G     +  +     +     +           G      A  YG 
Sbjct: 58  LLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 117

Query: 557 YEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRA 616
            +  + L K GANVN+    K                 D       G TAL  A      
Sbjct: 118 VKALKFLYKRGANVNLRRKTKE----------------DQERLRKGGATALMDAA----- 156

Query: 617 VLSGDHKK--EELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGH 674
                H +  + LL+                   ++G  +    +       ++      
Sbjct: 157 --EKGHVEVLKILLD---------EMGADVNACDNMGRNALIHALLSSDDSDVEAITH-- 203

Query: 675 CLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLI-RKGAH 733
            LL+                  VN +    G TPL  AV     K   +V+ L+ ++   
Sbjct: 204 LLLDHGAD--------------VNVRGER-GKTPLILAVEK---KHLGLVQRLLEQEHIE 245

Query: 734 LNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVL 773
           +N+ + +    + LA +L    + + L + GA  +  D++
Sbjct: 246 INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLV 285

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.1 bits (230), Expect = 3e-21
 Identities = 53/291 (18%), Positives = 84/291 (28%), Gaps = 44/291 (15%)

Query: 1   YGRKDVVEYLLASGASIHARDD-GGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
               D+V+ LL  GA+++ +++ GG  PLHNA      D+V LLL   A+P  R     T
Sbjct: 15  NEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGAT 74

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSN------------QYVYGIGGGTGCPMHKDRSCY 107
           P   AA  G   +                           Y              + +  
Sbjct: 75  PFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLR 134

Query: 108 LAHGADPFLKNQEGQTPLDLTVA----EDVRSLLQDAMAQYPGAPSCAETASVPPPSQYS 163
                D     + G T L         E ++ LL +  A            ++   +   
Sbjct: 135 RKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA------DVNACDNMGRNALIH 188

Query: 164 NTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACS 223
                D+  +          G  V++                        G  PL  A  
Sbjct: 189 ALLSSDDSDVEAITHLLLDHGADVNVRGER--------------------GKTPLILAVE 228

Query: 224 YGHFEVTEMLI-KAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
             H  + + L+ +    +N  D    T L  A      ++  LL   GA  
Sbjct: 229 KKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (206), Expect = 4e-18
 Identities = 48/268 (17%), Positives = 84/268 (31%), Gaps = 20/268 (7%)

Query: 26  HPLHNACSFGHADVVRLLLEADANPNTRDNWN-FTPLHEAAAKGKTDVC--IGIYFAEHS 82
           H L  A      D+V+ LLE  AN N ++    +TPLH A    + D+   +  + A+  
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66

Query: 83  SKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMA 142
            +                 K    +L+ GAD    +  G T             L+    
Sbjct: 67  LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126

Query: 143 QYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGG--DSVSLPPTSPPQPLAL 200
           +        +T       +    +             +   G  + + +           
Sbjct: 127 RGANVNLRRKTKEDQERLRKGGAT---------ALMDAAEKGHVEVLKILLDEMGA---- 173

Query: 201 ETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRL 260
             V           +  L ++       +T +L+  GA+VN       TPL  A  K  L
Sbjct: 174 -DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHL 232

Query: 261 EVCSLLLS-EGADPTLHNCHSKSAIDVA 287
            +   LL  E  +    +   K+A+ +A
Sbjct: 233 GLVQRLLEQEHIEINDTDSDGKTALLLA 260

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (172), Expect = 1e-13
 Identities = 57/262 (21%), Positives = 93/262 (35%), Gaps = 27/262 (10%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PLHNA      ++ E+L++ GA+         TP   AA    +++  L LS+GAD 
Sbjct: 39  GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV 98

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT 333
              + +  +A   A      + L   +K    +   R+                 +    
Sbjct: 99  NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE-----------DQERLRKG 147

Query: 334 GDTPLPGTLLIDLLSDDKEFITV-AEEMQATVREHRDNGQSGGYTALQVAG-----ENSK 387
           G T     L+        E + +  +EM A V    + G++    AL  +        + 
Sbjct: 148 GATA----LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITH 203

Query: 388 KLLQEPPSV----VDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAA 443
            LL     V       ++ L+ A +   + +V RLL      +N  D DG+  T L  A 
Sbjct: 204 LLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK--TALLLAV 261

Query: 444 GYNRVAVVEYLLAHGADVHSKD 465
                 + E L   GA     D
Sbjct: 262 ELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (154), Expect = 3e-11
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 2/88 (2%)

Query: 1052 KNMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH-GADPSKKNRDG 1110
             +     +T   + HGA+VNV      TPL  A  K    +V+ LL+    + +  + DG
Sbjct: 194  DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDG 253

Query: 1111 ATPLDL-VREGDQDVSDLLRGNSALLDA 1137
             T L L V    + +++LL    A  D 
Sbjct: 254  KTALLLAVELKLKKIAELLCKRGASTDC 281

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (148), Expect = 1e-10
 Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 1/55 (1%)

Query: 1   YGRKDVVEYLLAS-GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD 54
                +V+ LL      I+  D  G   L  A       +  LL +  A+ +  D
Sbjct: 229 KKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (144), Expect = 4e-10
 Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 23/138 (16%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH-GADPSKKNRDGATPLDLVREGDQD- 1123
               +         T L +AA KG  +++++LL   GAD +  +  G   L        D 
Sbjct: 137  TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 196

Query: 1124 -----VSDLL-----------RGNSALLDAAKKGNLGRVQKLLTAD--NINCRDAQGRNS 1165
                    LL           RG + L+ A +K +LG VQ+LL  +   IN  D+ G+  
Sbjct: 197  DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK-- 254

Query: 1166 TPLHLAAGEKRHLLMCRV 1183
            T L LA  E +   +  +
Sbjct: 255  TALLLAV-ELKLKKIAEL 271

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (135), Expect = 5e-09
 Identities = 10/43 (23%), Positives = 14/43 (32%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKN 1107
            +    +N  D    T L  A       I  LL + GA     +
Sbjct: 241  QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (111), Expect = 6e-06
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 1073 ADLWKFTPLHEAAAKGKADIVRLLLQHGADP-SKKNRDGATPLDL-VREGDQDV 1124
            A +     L +A      D+V+ LL+ GA+   ++   G TPL   V+   +D+
Sbjct: 1    AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDI 54

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 3e-05
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 1130 GNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLGKS 1188
             N  L+ A +  ++  VQ+LL    N+N ++ +G   TPLH A  +     +  + L   
Sbjct: 5    DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGW-TPLHNAV-QMSREDIVELLLRHG 62

Query: 1189 FLQFNAIKMAHAPPGHHSVMG 1209
                   K    P    ++ G
Sbjct: 63   ADPVLRKKNGATPFLLAAIAG 83

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 4e-04
 Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 24/195 (12%)

Query: 1064 VKHGANVNVAD-LWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL------ 1116
            ++ GANVN  +    +TPLH A    + DIV LLL+HGADP  + ++GATP  L      
Sbjct: 25   LEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGS 84

Query: 1117 -------VREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRN---- 1164
                   + +G         G +A ++AA  G +  ++ L     N+N R     +    
Sbjct: 85   VKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERL 144

Query: 1165 ----STPLHLAAGEKRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSSGGLYFPE 1220
                +T L  AA EK H+ + ++ L +     NA          H+++    S       
Sbjct: 145  RKGGATALMDAA-EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITH 203

Query: 1221 YVVYRGEQVILINGY 1235
             ++  G  V +    
Sbjct: 204  LLLDHGADVNVRGER 218

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  102 bits (254), Expect = 3e-24
 Identities = 50/269 (18%), Positives = 95/269 (35%), Gaps = 8/269 (2%)

Query: 517 VKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLW 576
           +K+ +  +T        RK T + F  G      ACS G  E    L++ GA++N A++ 
Sbjct: 14  LKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRLLERGADINYANVD 72

Query: 577 KFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGG 636
             T LH+A       +   +     +G             + +        +    +  G
Sbjct: 73  GLTALHQACID---DNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQG 129

Query: 637 GLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTS-D 695
                    G T +         EL+     +         +   +      +++L S  
Sbjct: 130 AHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH 189

Query: 696 VVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLD 755
           + + +H  +G T LH    +       +++ LI+    +N K+ +   P+H AA  G  +
Sbjct: 190 INDVRHAKSGGTALHV---AAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEE 246

Query: 756 VLDTLLRLGAKVNLVDVLGQTALHRTARD 784
               L+     +  V+ +GQTA      D
Sbjct: 247 ACRILVENLCDMEAVNKVGQTAFDVADED 275

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 97.5 bits (241), Expect = 1e-22
 Identities = 59/263 (22%), Positives = 88/263 (33%), Gaps = 35/263 (13%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSN 86
               ACS G  + V  LLE  A+ N  +    T LH+A      D+   +     +    
Sbjct: 43  VFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQP 102

Query: 87  QYVYG--IGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQY 144
                  +     C         ++ GA     N EG TPLD+   E +  LLQ+ + + 
Sbjct: 103 DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ 162

Query: 145 PGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVI 204
                 A         + +                SG                       
Sbjct: 163 GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG---------------------- 200

Query: 205 MPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCS 264
                        LH A + G+ EV ++LI+A  +VN  D   +TPLH AA   + E C 
Sbjct: 201 -----------TALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACR 249

Query: 265 LLLSEGADPTLHNCHSKSAIDVA 287
           +L+    D    N   ++A DVA
Sbjct: 250 ILVENLCDMEAVNKVGQTAFDVA 272

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 88.6 bits (218), Expect = 1e-19
 Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 27/255 (10%)

Query: 398 DLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH 457
           D  +  L A   GD   V RLL      +N  ++DG   T LH A   + V +V++L+ +
Sbjct: 39  DDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGL--TALHQACIDDNVDMVKFLVEN 95

Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKV 517
           GA+++  DN                    L +      +  ++    L  A +      +
Sbjct: 96  GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELL 155

Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAA-----------------GLVPLHNACSYGHYEVT 560
           +  VN Q V+       +   +   A                 G   LH A + G+ EV 
Sbjct: 156 QNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVL 215

Query: 561 EMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPC 613
           ++L++   +VN+ D   +TPLH AA        + L+++  D+   N  G+TA D+A   
Sbjct: 216 KLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED 275

Query: 614 TRAVLSGDHKKEELL 628
               L    KK+ LL
Sbjct: 276 ILGYLEELQKKQNLL 290

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 88.2 bits (217), Expect = 2e-19
 Identities = 48/275 (17%), Positives = 85/275 (30%), Gaps = 33/275 (12%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
               ACS G  E    L++ GA++N  ++   T LH+A     +++   L+  GA+    
Sbjct: 43  VFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQP 102

Query: 277 NCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT 336
           +      +  A +         E+                    +  +    +       
Sbjct: 103 DNEGWIPLHAAASCGYLDI--AEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160

Query: 337 PLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSV 396
                +      +++  +  A +   +   +       G TAL VA              
Sbjct: 161 RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK----------- 209

Query: 397 VDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLA 456
                        G   V+   L    + VN +D DG   TPLH AA + +      L+ 
Sbjct: 210 -------------GYTEVLKL-LIQARYDVNIKDYDGW--TPLHAAAHWGKEEACRILVE 253

Query: 457 HGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           +  D+     A +K G T    A +     L  L 
Sbjct: 254 NLCDM----EAVNKVGQTAFDVADEDILGYLEELQ 284

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 70.5 bits (171), Expect = 1e-13
 Identities = 55/257 (21%), Positives = 81/257 (31%), Gaps = 31/257 (12%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  + V  LL  GA I+  +  GL  LH AC   + D+V+ L+E  AN N  DN  + P
Sbjct: 50  SGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIP 109

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQE 120
           LH                                   C         ++ GA     N E
Sbjct: 110 LHA-------------------------------AASCGYLDIAEYLISQGAHVGAVNSE 138

Query: 121 GQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS 180
           G TPLD+   E +  LLQ+ + +       A         + +                S
Sbjct: 139 GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198

Query: 181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANV 240
           G     V+           L             G  PLH A  +G  E   +L++   ++
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258

Query: 241 NAMDLWQFTPLHEAASK 257
            A++    T    A   
Sbjct: 259 EAVNKVGQTAFDVADED 275

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 64.4 bits (155), Expect = 2e-11
 Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 12/146 (8%)

Query: 986  GQAHERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLET 1045
            G     +   G   ++   ++  +E         G        + ++ + + +       
Sbjct: 129  GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSG 188

Query: 1046 GTKKKKKNMYYGTLTPHNVKHG------------ANVNVADLWKFTPLHEAAAKGKADIV 1093
                 +     GT        G             +VN+ D   +TPLH AA  GK +  
Sbjct: 189  HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEAC 248

Query: 1094 RLLLQHGADPSKKNRDGATPLDLVRE 1119
            R+L+++  D    N+ G T  D+  E
Sbjct: 249  RILVENLCDMEAVNKVGQTAFDVADE 274

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 63.2 bits (152), Expect = 4e-11
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 32/135 (23%)

Query: 9   YLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKG 68
           +L +   +       G   LH A + G+ +V++LL++A  + N +D   +TPLH AA  G
Sbjct: 184 WLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG 243

Query: 69  KTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLT 128
           K + C                                  + +  D    N+ GQT  D+ 
Sbjct: 244 KEEAC-------------------------------RILVENLCDMEAVNKVGQTAFDV- 271

Query: 129 VAEDVRSLLQDAMAQ 143
             ED+   L++   +
Sbjct: 272 ADEDILGYLEELQKK 286

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 62.4 bits (150), Expect = 7e-11
 Identities = 44/326 (13%), Positives = 84/326 (25%), Gaps = 57/326 (17%)

Query: 279 HSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTP 337
            S++ ++    +  + ++  +  G   L AC  GD   V + L     +N+ +   G T 
Sbjct: 19  GSETDLEPPVVKRKKTKVKFD-DGAVFLAACSSGDTEEVLRLLERGADINYANVD-GLTA 76

Query: 338 LPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVV 397
           L             +                    +       +    +        +  
Sbjct: 77  LH------------QACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEY 124

Query: 398 DLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH 457
            +       +   +      +          ++   R    +  A       ++      
Sbjct: 125 LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQW 184

Query: 458 GADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKV 517
               H  D    K G T LH AA KG T++  LL  +    N                  
Sbjct: 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN------------------ 226

Query: 518 KKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWK 577
                                +    G  PLH A  +G  E   +LV++  ++   +   
Sbjct: 227 ---------------------IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVG 265

Query: 578 FTPLHEAA---AKALLQHGADINLKN 600
            T    A       L +     NL +
Sbjct: 266 QTAFDVADEDILGYLEELQKKQNLLH 291

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 50.1 bits (118), Expect = 8e-07
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL 1116
                 A + G  + V  LL+ GAD +  N DG T L  
Sbjct: 42   AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQ 79

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 44.3 bits (103), Expect = 5e-05
 Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 4/51 (7%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPN 51
           +G+++    L+ +   + A +  G      A      D++  L E     N
Sbjct: 242 WGKEEACRILVENLCDMEAVNKVGQTAFDVADE----DILGYLEELQKKQN 288

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 40.5 bits (93), Expect = 8e-04
 Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 3/91 (3%)

Query: 1130 GNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCRVTLGKS 1188
              +  L A   G+   V +LL    +IN  +  G   T LH A  +    ++  +    +
Sbjct: 40   DGAVFLAACSSGDTEEVLRLLERGADINYANVDGL--TALHQACIDDNVDMVKFLVENGA 97

Query: 1189 FLQFNAIKMAHAPPGHHSVMGRPSSGGLYFP 1219
             +     +         S      +  L   
Sbjct: 98   NINQPDNEGWIPLHAAASCGYLDIAEYLISQ 128

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  101 bits (252), Expect = 3e-24
 Identities = 57/284 (20%), Positives = 93/284 (32%), Gaps = 37/284 (13%)

Query: 537 TPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA----------- 585
           +P+        LH   + G Y +TE + +   N+ +      T LH  A           
Sbjct: 2   SPIK-------LHTEAA-GSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDL 52

Query: 586 ----AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRY 641
               AK  +  GAD+N  + D  T L LAV   R  L     K                +
Sbjct: 53  IVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALH 112

Query: 642 TWP-----------LGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKK 690
                         L +T +           M    I    +G   + + +       K 
Sbjct: 113 QAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKV 172

Query: 691 FLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAAD 750
                       Y G T LH A          +   +  KG++ ++++++   PI LAA 
Sbjct: 173 DYDGAARKDSEKYKGRTALHYAAQVSNMPI--VKYLVGEKGSNKDKQDEDGKTPIMLAAQ 230

Query: 751 LGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
            G ++V+  L++ GA V  VD    TA      ++    V +  
Sbjct: 231 EGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 96.7 bits (239), Expect = 2e-22
 Identities = 52/278 (18%), Positives = 92/278 (33%), Gaps = 10/278 (3%)

Query: 216 VPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTL 275
           + LH   + G + +TE + +   N+        T LH  AS S  E    L+   A   +
Sbjct: 4   IKLHTEAA-GSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61

Query: 276 HNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGD 335
                 +A+D      L   +    +           DP+   K   S +          
Sbjct: 62  AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 121

Query: 336 TP--LPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEP 393
               +  +  +    ++ +   +   M     E RD   S      + A  +     ++ 
Sbjct: 122 MMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 181

Query: 394 PSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEY 453
                  + L  A++  +M +V  L+       + +D DG+  TP+  AA   R+ VV Y
Sbjct: 182 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGK--TPIMLAAQEGRIEVVMY 239

Query: 454 LLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           L+  GA V     A D    T    A       +  + 
Sbjct: 240 LIQQGASV----EAVDATDHTARQLAQANNHHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 89.4 bits (220), Expect = 5e-20
 Identities = 37/274 (13%), Positives = 63/274 (22%), Gaps = 19/274 (6%)

Query: 2   GRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLL--------EADANPNTR 53
           G   + E +     +I          LH   S   A+    L+         A A+ N  
Sbjct: 12  GSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM 70

Query: 54  DNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGAD 113
           D    TPL  A    +  +   +  A                                + 
Sbjct: 71  DCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNST 130

Query: 114 PFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSL 173
               + E      +T    V                          +   ++      + 
Sbjct: 131 KLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA 190

Query: 174 PPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEML 233
              A    +      L                   +    G  P+  A   G  EV   L
Sbjct: 191 LHYAAQVSNMPIVKYLVGEKGSNK----------DKQDEDGKTPIMLAAQEGRIEVVMYL 240

Query: 234 IKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLL 267
           I+ GA+V A+D    T    A + +   +  +  
Sbjct: 241 IQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 77.9 bits (190), Expect = 4e-16
 Identities = 44/328 (13%), Positives = 72/328 (21%), Gaps = 56/328 (17%)

Query: 437 TPLHFA-AGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSP 495
           +P+          A+ E +     ++        +   T LH  A     + S  L +  
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNI-----IDPRHNRTVLHWIASNSSAEKSEDLIVHE 56

Query: 496 SAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYG 555
           +              G D            VNA D      TPL  A             
Sbjct: 57  AKEC--------IAAGAD------------VNAMDCDEN--TPLMLAVLARRRRLVAYLM 94

Query: 556 HYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTR 615
                  +        +                +L                         
Sbjct: 95  KAGADPTIYNKSERSALHQAAANR--DFGMMVYMLNST------------------KLKG 134

Query: 616 AVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHC 675
            +   D      L       G     +  L                      +       
Sbjct: 135 DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR----KDSEKYKGRTA 190

Query: 676 LLEACRQGDPSRVKKFLTSDVVNFKHP-YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHL 734
           L  A +  +   VK  +     N       G TP+  A       R  +V  LI++GA +
Sbjct: 191 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE---GRIEVVMYLIQQGASV 247

Query: 735 NEKNKELLAPIHLAADLGHLDVLDTLLR 762
              +        LA    H +++D   R
Sbjct: 248 EAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 71.7 bits (174), Expect = 5e-14
 Identities = 47/282 (16%), Positives = 77/282 (27%), Gaps = 46/282 (16%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSN 86
            LH   + G   +   +     N       N T LH  A+    +         H +K  
Sbjct: 5   KLHTEAA-GSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKS--EDLIVHEAKEC 60

Query: 87  QYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPG 146
                                +A GAD    + +  TPL L V    R L+   M     
Sbjct: 61  ---------------------IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD 99

Query: 147 APSCAETASVPPPSQYSNTSCGDNVSL--------------------PPPAQYSGSGGDS 186
                ++         +N   G  V +                         ++      
Sbjct: 100 PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQV 159

Query: 187 VSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGH-FEVTEMLIKAGANVNAMDL 245
            S                         G   LH A    +   V  ++ + G+N +  D 
Sbjct: 160 ASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDE 219

Query: 246 WQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
              TP+  AA + R+EV   L+ +GA     +    +A  +A
Sbjct: 220 DGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 261

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 67.5 bits (163), Expect = 1e-12
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 1/86 (1%)

Query: 1044 ETGTKKKKKNMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADP 1103
             T      +      +     + G+N +  D    TP+  AA +G+ ++V  L+Q GA  
Sbjct: 188  RTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV 247

Query: 1104 SKKNRDGATPLDL-VREGDQDVSDLL 1128
               +    T   L       ++ D+ 
Sbjct: 248  EAVDATDHTARQLAQANNHHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 56.3 bits (134), Expect = 5e-09
 Identities = 14/46 (30%), Positives = 21/46 (45%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEA 46
            GR +VV YL+  GAS+ A D         A +  H ++V +    
Sbjct: 231 EGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 276

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 52.8 bits (125), Expect = 8e-08
 Identities = 49/331 (14%), Positives = 77/331 (23%), Gaps = 66/331 (19%)

Query: 404 LEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHS 463
           L     G   +   +     +I++ R    R  T LH+ A  +     E L+ H A    
Sbjct: 6   LHTEAAGSYAITEPITRESVNIIDPRH--NR--TVLHWIASNSSAEKSEDLIVHEAKECI 61

Query: 464 KD----NATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKK 519
                 NA D    TPL  A    R                    L              
Sbjct: 62  AAGADVNAMDCDENTPLMLAVLARRR------------------RLVAYLMKAGADPTIY 103

Query: 520 LVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFT 579
             + ++   +  A R    + +      L              L+    N     +    
Sbjct: 104 NKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAK 163

Query: 580 PLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLH 639
            L E  AK      A  + +   G+TAL  A   +                         
Sbjct: 164 LLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNM----------------------- 200

Query: 640 RYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDV-VN 698
                               E       +DE     ++ A ++G    V   +     V 
Sbjct: 201 ------------PIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 248

Query: 699 FKHPYTGDTPLHCAVTSPYPKRKAIVESLIR 729
                   T    A  +       IV+   R
Sbjct: 249 AVDAT-DHTARQLAQAN---NHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 48.2 bits (113), Expect = 2e-06
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 9/59 (15%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH--------GADPSKKNRDGATPL 1114
             +   N+ +      T LH  A+   A+    L+ H        GAD +  + D  TPL
Sbjct: 21   TRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPL 78

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 46.3 bits (108), Expect = 1e-05
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQ 1098
            ++ GA+V   D    T    A A    +IV +  +
Sbjct: 241  IQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 744 PIHLA-ADLGHLDVLDTLLRLGAKVNLVDVL-GQTALHRTARDDKTQAVRVLLSHNADTS 801
           PI L     G   + + + R    VN++D    +T LH  A +   +    L+ H A   
Sbjct: 3   PIKLHTEAAGSYAITEPITRES--VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 802 I 802
           I
Sbjct: 61  I 61

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 41.3 bits (95), Expect = 4e-04
 Identities = 29/129 (22%), Positives = 44/129 (34%), Gaps = 29/129 (22%)

Query: 1061 PHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLL-LQHGADPSKKNRDGATPLDLVRE 1119
              +    A  +       T LH AA      IV+ L  + G++  K++ DG TP+ L   
Sbjct: 171  KVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIML--- 227

Query: 1120 GDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRH- 1177
                             AA++G +  V  L+    ++   DA     T   LA     H 
Sbjct: 228  -----------------AAQEGRIEVVMYLIQQGASVEAVDATDH--TARQLAQANNHHN 268

Query: 1178 ----LLMCR 1182
                   CR
Sbjct: 269  IVDIFDRCR 277

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 14/101 (13%), Positives = 26/101 (25%), Gaps = 33/101 (32%)

Query: 1079 TPLH-EAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVSDLLRGNSALLDA 1137
            +P+     A G   I   + +   +     R   T L                       
Sbjct: 2    SPIKLHTEAAGSYAITEPITRESVN-IIDPRHNRTVLHW--------------------I 40

Query: 1138 AKKGNLGRVQKLLTAD---------NINCRDAQGRNSTPLH 1169
            A   +  + + L+  +         ++N  D      TPL 
Sbjct: 41   ASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDEN--TPLM 79

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.2 bits (235), Expect = 4e-22
 Identities = 43/257 (16%), Positives = 65/257 (25%), Gaps = 17/257 (6%)

Query: 21  DDGGLHPLHNACSFGHADVVRLLLEADANP---NTRDNWNFTPLHEAAAKGKTDVCIGIY 77
            + G   LH A    H   +  LL   A     + +++   T LH AA  G+      +Y
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 78  FAEHSSKSNQYVYGIGGGTGCPMHKDRSC--YLAHGADPFLKNQEGQTPLDLTVAEDVRS 135
            A       +          C +         L           +           D   
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125

Query: 136 LLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPP 195
                 +Q                   +    G                        +  
Sbjct: 126 APAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHK------------DAEM 173

Query: 196 QPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAA 255
             L  +     +      G  PLH A       V E+L+KAGA+  A      TPL  A 
Sbjct: 174 VRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSAL 233

Query: 256 SKSRLEVCSLLLSEGAD 272
            +    +  LL + GA 
Sbjct: 234 LRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.9 bits (224), Expect = 1e-20
 Identities = 46/344 (13%), Positives = 76/344 (22%), Gaps = 92/344 (26%)

Query: 425 IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGR 484
           +      DG   T LH A  +     +++LL   A      +  +  G T LH AA  G 
Sbjct: 1   VFGYVTEDGD--TALHLAVIHQHEPFLDFLLGFSAGHEYL-DLQNDLGQTALHLAAILGE 57

Query: 485 TQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAG 544
                 L  + +      R    A                                    
Sbjct: 58  ASTVEKLYAAGAGVLVAERGGHTAL----------------------------------- 82

Query: 545 LVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGK 604
               H AC    +    +L++   +               A+   L    D     +   
Sbjct: 83  ----HLACRVRAHTCACVLLQPRPSHP-----------RDASDTYLTQSQDCTPDTSHAP 127

Query: 605 TALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFM 664
            A+D            D      LEA    G             ++         +L   
Sbjct: 128 AAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP 187

Query: 665 PRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIV 724
                    H  +EA                                          +++
Sbjct: 188 EPTCGRTPLHLAVEAQA---------------------------------------ASVL 208

Query: 725 ESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVN 768
           E L++ GA    +      P+  A    +  +   L   GA   
Sbjct: 209 ELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.5 bits (197), Expect = 3e-17
 Identities = 47/256 (18%), Positives = 76/256 (29%), Gaps = 23/256 (8%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGAN---VNAMDLWQFTPLHEAASKSRLEVCSLLLSEG 270
           G   LH A  + H    + L+   A    ++  +    T LH AA          L + G
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 271 ADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKH 330
           A   +      +A+ +A                 LL+            +LT        
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCAC------VLLQPRPSHPRDASDTYLTQ-----SQ 117

Query: 331 PYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTAL------QVAGE 384
             T DT      +    + + E     E+ +  +     +G +  + A+       V   
Sbjct: 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLL 177

Query: 385 NSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAG 444
                    P      + L  A +    +V+  LL +       R   GR  TPL  A  
Sbjct: 178 RDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYGGR--TPLGSALL 234

Query: 445 YNRVAVVEYLLAHGAD 460
                +   L AHGA 
Sbjct: 235 RPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.6 bits (192), Expect = 2e-16
 Identities = 43/261 (16%), Positives = 67/261 (25%), Gaps = 24/261 (9%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGAN---VNVADLWKFTPLHEAAAKALLQHGADINLKN 600
           G   LH A  + H    + L+   A    +++ +    T LH AA          +    
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 601 TDGKTALDLAVPCTR-AVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKM 659
                A          A     H    +L   R                           
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCACVLLQPR-----------------PSHPRDASDT 111

Query: 660 ELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNF-KHPYTGDTPLHCAVTSPYP 718
            L        +          +    +  +       +      Y G TPLH AV     
Sbjct: 112 YLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDA 171

Query: 719 KRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTAL 778
           +   ++                   P+HLA +     VL+ LL+ GA        G+T L
Sbjct: 172 EMVRLLRDAGADLNKPEPTCGR--TPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPL 229

Query: 779 HRTARDDKTQAVRVLLSHNAD 799
                       R+L +H A 
Sbjct: 230 GSALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.5 bits (158), Expect = 4e-12
 Identities = 41/252 (16%), Positives = 57/252 (22%), Gaps = 60/252 (23%)

Query: 403 LLEASKGGDMTVVTRLLSSC--PHIVNCRDLDGRHSTPLHFAAGYNRV------------ 448
           L  A        +  LL        ++ ++  G+  T LH AA                 
Sbjct: 13  LHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQ--TALHLAAILGEASTVEKLYAAGAG 70

Query: 449 ---------------------AVVEYLLAHGADVHSKDN---------ATDKWGFTPLHE 478
                                     LL          +          T      P   
Sbjct: 71  VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130

Query: 479 AAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTP 538
            +Q                  +             L       + + V     AG     
Sbjct: 131 DSQPNPENEEEPRDEDWRLQLEAENYDGHTP----LHVAVIHKDAEMVRLLRDAGADLNK 186

Query: 539 LHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQ 591
                G  PLH A       V E+L+K GA+         TPL  A        A+ L  
Sbjct: 187 PEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA 246

Query: 592 HGADINLKNTDG 603
           HGA    +  DG
Sbjct: 247 HGAP---EPEDG 255

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.2 bits (139), Expect = 1e-09
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 3/47 (6%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDG 1110
            +K GA+         TPL  A  +    + RLL  HGA    +  DG
Sbjct: 212  LKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA---PEPEDG 255

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRD 54
                V+E LL +GA   AR  GG  PL +A    +  + RLL    A P   D
Sbjct: 202 AQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA-PEPED 254

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.5 bits (132), Expect = 8e-09
 Identities = 34/245 (13%), Positives = 57/245 (23%), Gaps = 21/245 (8%)

Query: 1   YGRKDVVEYLLASGAS---IHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWN 57
           +  +  +++LL   A    +  ++D G   LH A   G A  V  L  A A     +   
Sbjct: 19  HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGG 78

Query: 58  FTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLK 117
            T LH A               +      +               D S   A        
Sbjct: 79  HTALHLACRVRAHTCA--CVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVD----- 131

Query: 118 NQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPA 177
                         +     +D   Q         T                        
Sbjct: 132 -------SQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL 184

Query: 178 QYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVAL----GLVPLHNACSYGHFEVTEML 233
                      L      Q  ++  +++ +G         G  PL +A    +  +  +L
Sbjct: 185 NKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLL 244

Query: 234 IKAGA 238
              GA
Sbjct: 245 RAHGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.6 bits (127), Expect = 4e-08
 Identities = 31/194 (15%), Positives = 55/194 (28%), Gaps = 3/194 (1%)

Query: 943  GQAHERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEVADE--NGGQAHERMLFHGSPFI 1000
            G+A      + +     + ++G      +    R    A        +H R         
Sbjct: 56   GEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQ 115

Query: 1001 NAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSMAGGLETGTKKKKKNMYYGTLT 1060
            +           A +             D    +   +      T       +     + 
Sbjct: 116  SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVR 175

Query: 1061 PHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VRE 1119
                              TPLH A     A ++ LLL+ GADP+ +   G TPL   +  
Sbjct: 176  LLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLR 235

Query: 1120 GDQDVSDLLRGNSA 1133
             +  ++ LLR + A
Sbjct: 236  PNPILARLLRAHGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 3/42 (7%)

Query: 1078 FTPLHEAAAKGKADIVRLLLQHGADPS---KKNRDGATPLDL 1116
             T LH A        +  LL   A       +N  G T L L
Sbjct: 10   DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHL 51

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.4 bits (111), Expect = 4e-06
 Identities = 24/165 (14%), Positives = 39/165 (23%), Gaps = 20/165 (12%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHP--------------LHNACSFGHADVVRLLLEA 46
                    LL    S                           ++      +      + 
Sbjct: 88  VRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDW 147

Query: 47  DANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSC 106
                  +    TPLH A      ++   +  A       +   G          +  S 
Sbjct: 148 RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASV 207

Query: 107 Y---LAHGADPFLKNQEGQTPLDLTVA---EDVRSLLQDAMAQYP 145
               L  GADP  +   G+TPL   +      +  LL+   A  P
Sbjct: 208 LELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 6/56 (10%)

Query: 1130 GNSALLDAAKKGNLGRVQKLLTA----DNINCRDAQGRNSTPLHLAAGEKRHLLMC 1181
            G++AL  A    +   +  LL      + ++ ++  G+  T LHLAA       + 
Sbjct: 9    GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQ--TALHLAAILGEASTVE 62

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 95.1 bits (235), Expect = 8e-22
 Identities = 34/199 (17%), Positives = 56/199 (28%), Gaps = 19/199 (9%)

Query: 430 DLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSA 489
           D  G   TPLH+      + +V++L+ HG++    DN  +      +            A
Sbjct: 104 DEHGN--TPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEA 161

Query: 490 LLPLSPSAAND-------PLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFA 542
           LL                 L  +         +   K      +        +       
Sbjct: 162 LLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTN 221

Query: 543 AGLVPLHNACSYGHYEVTEMLVKH---GANVNVADLWKFTPLHEAA-------AKALLQH 592
                 ++        + E L         +N  D    T L+ AA         ALL +
Sbjct: 222 EKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDY 281

Query: 593 GADINLKNTDGKTALDLAV 611
           GAD  + N  G   +D   
Sbjct: 282 GADPFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.7 bits (208), Expect = 3e-18
 Identities = 38/274 (13%), Positives = 77/274 (28%), Gaps = 27/274 (9%)

Query: 514 LTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVA 573
           L ++      +   + +           ++     H +      EV +       N+N+ 
Sbjct: 43  LQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIP 102

Query: 574 -DLWKFTPLHEAAA-------KALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKE 625
            D    TPLH   +       K L++HG++    +  G++ L  AV             E
Sbjct: 103 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNN--YDSGTFE 160

Query: 626 ELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDP 685
            LL+               +    I                 K            +Q  P
Sbjct: 161 ALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAA-----AKYYLDILMGWIVKKQNRP 215

Query: 686 SRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPI 745
                               ++  +             ++        LN ++      +
Sbjct: 216 ------------IQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCL 263

Query: 746 HLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALH 779
           ++AA LG++ ++D LL  GA   + +  G   + 
Sbjct: 264 NIAARLGNISIVDALLDYGADPFIANKSGLRPVD 297

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 73.5 bits (179), Expect = 2e-14
 Identities = 32/253 (12%), Positives = 77/253 (30%), Gaps = 39/253 (15%)

Query: 4   KDVVEYLLASGASIHAR-DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLH 62
           ++V +    +  +++   D+ G  PLH   S  + ++V+ L++  +N    DN   + L 
Sbjct: 86  QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLV 145

Query: 63  EAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQ 122
           +A              + ++  S  +   +     C + +D                 G 
Sbjct: 146 KA------------VKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGC 193

Query: 123 TPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGS 182
           +       + +   +     +   + +  + +     +     S  +N+ L        +
Sbjct: 194 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 253

Query: 183 GGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNA 242
             DS                           G   L+ A   G+  + + L+  GA+   
Sbjct: 254 AQDS--------------------------NGDTCLNIAARLGNISIVDALLDYGADPFI 287

Query: 243 MDLWQFTPLHEAA 255
            +     P+   A
Sbjct: 288 ANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.8 bits (177), Expect = 3e-14
 Identities = 41/217 (18%), Positives = 74/217 (34%), Gaps = 34/217 (15%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA-----------AAKALLQH 592
           G  PLH   S  + E+ + LVKHG+N    D    + L +A               L   
Sbjct: 107 GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL 166

Query: 593 GADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGW 652
              + L+++  +T L   +  +               AA+     L  +        I  
Sbjct: 167 YPCLILEDSMNRTILHHIIITSG--------MTGCSAAAKYYLDILMGWIVKKQNRPIQS 218

Query: 653 CSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCA 712
            +   + +       + +     L             K++ ++++N +    GDT L+ A
Sbjct: 219 GTNEKESKPNDKNGERKDSILENLDL-----------KWIIANMLNAQDSN-GDTCLNIA 266

Query: 713 VTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAA 749
                    +IV++L+  GA     NK  L P+   A
Sbjct: 267 ARL---GNISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.2 bits (165), Expect = 9e-13
 Identities = 37/291 (12%), Positives = 73/291 (25%), Gaps = 50/291 (17%)

Query: 4   KDVVEYLLASGASIHARD-DGGLHPLHNACSFGHADVVRLLLEADANPNTR-DNWNFTPL 61
           +++   L    ++ ++          H +      +V         N N   D    TPL
Sbjct: 52  QEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPL 111

Query: 62  HEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEG 121
           H   +    ++                                   + HG++    +  G
Sbjct: 112 HWLTSIANLELV-------------------------------KHLVKHGSNRLYGDNMG 140

Query: 122 QTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSG 181
           ++ L              A+       S    A +             N ++      + 
Sbjct: 141 ESCLVK------------AVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITS 188

Query: 182 S--GGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIK---A 236
              G  + +           ++    P            ++        + E L      
Sbjct: 189 GMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWII 248

Query: 237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
              +NA D    T L+ AA    + +   LL  GADP + N      +D  
Sbjct: 249 ANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.5 bits (158), Expect = 7e-12
 Identities = 19/54 (35%), Positives = 24/54 (44%)

Query: 1062 HNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLD 1115
                    +N  D    T L+ AA  G   IV  LL +GADP   N+ G  P+D
Sbjct: 244  LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 297

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.9 bits (141), Expect = 9e-10
 Identities = 32/231 (13%), Positives = 64/231 (27%), Gaps = 36/231 (15%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP 273
           G  PLH   S  + E+ + L+K G+N    D    + L +A                 + 
Sbjct: 107 GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS-----GTFEA 161

Query: 274 TLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT 333
            L   +    ++ +  R +   +           A +      +   +       +    
Sbjct: 162 LLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTN 221

Query: 334 GDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEP 393
                P     +      E + +   +   +   +D+    G T L +A           
Sbjct: 222 EKESKPNDKNGERKDSILENLDLKWIIANML-NAQDS---NGDTCLNIAARL-------- 269

Query: 394 PSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAG 444
                           G++++V  LL          +  G    P+ F AG
Sbjct: 270 ----------------GNISIVDALLDYGAD-PFIANKSGL--RPVDFGAG 301

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 26/113 (23%)

Query: 1065 KHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH---GADPSKKNRDGATPLDLVREGD 1121
            K    +      K +  ++   + K  I+  L          + ++ +G T L++     
Sbjct: 211  KQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNI----- 265

Query: 1122 QDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAG 1173
                           AA+ GN+  V  LL    +    +  G    P+   AG
Sbjct: 266  ---------------AARLGNISIVDALLDYGADPFIANKSGL--RPVDFGAG 301

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.4 bits (111), Expect = 6e-06
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 1066 HGANVNVA-DLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATP 1113
               N+N+  D    TPLH   +    ++V+ L++HG++    +  G + 
Sbjct: 95   TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESC 143

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 23/164 (14%), Positives = 42/164 (25%), Gaps = 26/164 (15%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHA----DVVRLLLEADANPNTRDNW 56
               ++V++L+  G++    D+ G   L  A    +         LL          D+ 
Sbjct: 117 IANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSM 176

Query: 57  NFTPLHEAAAKGKTD-------VCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLA 109
           N T LH                  + I       K N+ +           +        
Sbjct: 177 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKD 236

Query: 110 H-----------GADPFLKNQEGQTPLDLTVAED----VRSLLQ 138
                             ++  G T L++         V +LL 
Sbjct: 237 SILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD 280

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 22/156 (14%), Positives = 47/156 (30%), Gaps = 37/156 (23%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGK-------ADIVRLLLQHGADPSKKNRDGATPL-- 1114
            VKHG+N    D    + L +A              ++  L          NR     +  
Sbjct: 127  VKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIII 186

Query: 1115 --------------------DLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLT--- 1151
                                 +V++ ++ +        +  +         + + L    
Sbjct: 187  TSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKW 246

Query: 1152 --ADNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTL 1185
              A+ +N +D+ G   T L++AA    ++ +    L
Sbjct: 247  IIANMLNAQDSNGD--TCLNIAA-RLGNISIVDALL 279

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 94.2 bits (233), Expect = 4e-21
 Identities = 26/282 (9%), Positives = 59/282 (20%), Gaps = 39/282 (13%)

Query: 214 GLVPLHNACSYGHFEVTEM---LIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEG 270
             V    A   G     +    L+ +   V  +    +     AA    L V + L    
Sbjct: 90  SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELA 149

Query: 271 ADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKH 330
               +    +                    + +       +     V   L         
Sbjct: 150 PTEIMAMIQA--------------------ENYHAFRLAAENGHLHVLNRLCELAPTEAT 189

Query: 331 PYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLL 390
                          +       I    +    +     +    G   +      +  + 
Sbjct: 190 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYV------NPFIA 243

Query: 391 QEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAV 450
           +    + ++      ++  G   +VT+        +            L        +  
Sbjct: 244 RHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYML---------RNLIRRNDEVLLDD 294

Query: 451 VEYLLAHGAD-VHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
           + +LL+       +            L  A + G     ALL
Sbjct: 295 IRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL 336

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 93.8 bits (232), Expect = 5e-21
 Identities = 31/284 (10%), Positives = 54/284 (19%), Gaps = 36/284 (12%)

Query: 5   DVVEYLLASGASIHARDDGGLHPLHNACSFGHADV---VRLLLEADANPNTRDNWNFTPL 61
                     +  H +          A   G +     + LLL +D         N+   
Sbjct: 71  HYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAF 130

Query: 62  HEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGT------GCPMHKDRSCYLAHGADP- 114
             AA  G   V       E +      +                     +          
Sbjct: 131 RLAAENGHLHVLN--RLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEA 188

Query: 115 --FLKNQEGQTPLDLTVA---EDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGD 169
              ++ +         V     +V + L D       A            + +       
Sbjct: 189 TAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNR 248

Query: 170 NVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEV 229
              +    + S   G                + V           L  L         + 
Sbjct: 249 LKEMHDAFKLSNPDGV--------------FDLVTKSECLQGFYMLRNLIRRNDEVLLDD 294

Query: 230 TEMLIKAGA-----NVNAMDLWQFTPLHEAASKSRLEVCSLLLS 268
              L+             +       L  A        C+LLLS
Sbjct: 295 IRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS 338

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 92.6 bits (229), Expect = 1e-20
 Identities = 35/312 (11%), Positives = 67/312 (21%), Gaps = 42/312 (13%)

Query: 513 DLTKVKKLVNPQTVNARDTAGRKSTPLHFAA--GLVPLHNACSYGHYEVTEM---LVKHG 567
           ++ +V++L+     +    A +  +  H       V    A   G     +    L+   
Sbjct: 57  NMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSD 116

Query: 568 ANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTD--GKTALDLAVPCTRAVL 618
             V V     +     AA          L +      +         A  LA        
Sbjct: 117 EIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGH--- 173

Query: 619 SGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLE 678
              H    L E A      + +                    ++           +  + 
Sbjct: 174 --LHVLNRLCELAPTEATAMIQAEN--YYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIH 229

Query: 679 ACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN 738
               G+                           +                        + 
Sbjct: 230 EFEYGEKYVNPFIARHVNRL----KEMHDAFKLSNPDGV---------FDLVTKSECLQG 276

Query: 739 KELLAPIHLAADLGHLDVLDTLLRLGA-----KVNLVDVLGQTALHRTARDDKTQAVRVL 793
             +L  +    D   LD +  LL +           +       L    R     A  +L
Sbjct: 277 FYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL 336

Query: 794 LSHNADTSIVSL 805
           LS     S+++L
Sbjct: 337 LSIP---SVLAL 345

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 78.0 bits (191), Expect = 1e-15
 Identities = 29/237 (12%), Positives = 52/237 (21%), Gaps = 33/237 (13%)

Query: 403 LLEASKGGDMTVV--TRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD 460
              A+  G  + +    LL +   IV     +         AA    + V+  L      
Sbjct: 94  CFVAAITGCSSALDTLCLLLTSDEIVKVIQAENY--QAFRLAAENGHLHVLNRLCELAPT 151

Query: 461 VHSKDNATDKWGFTPLHEAAQKGRTQLSALL-------PLSPSAANDPLRELFEACKGGD 513
                       +     AA+ G   +   L         +   A +     + A   G 
Sbjct: 152 EIMAMI--QAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 209

Query: 514 LTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVA 573
              +  L++   V        +              +            L       ++ 
Sbjct: 210 HNVINFLLD-CPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLV 268

Query: 574 D-------LWKFTPLHEAA-------AKALLQHGADINLKNT-----DGKTALDLAV 611
                    +    L            + LL       L  T     D    L LA+
Sbjct: 269 TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLAL 325

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 58.0 bits (139), Expect = 3e-09
 Identities = 19/123 (15%), Positives = 33/123 (26%), Gaps = 24/123 (19%)

Query: 1054 MYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADI---VRLLLQHGADPSKKNRDG 1110
            +YY     +  +  ++ +   +        AA  G +     + LLL           + 
Sbjct: 67   LYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAEN 126

Query: 1111 ATPLDLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTA-DNINCRDAQGRNSTPLH 1169
                 L                    AA+ G+L  + +L            Q  N     
Sbjct: 127  YQAFRL--------------------AAENGHLHVLNRLCELAPTEIMAMIQAENYHAFR 166

Query: 1170 LAA 1172
            LAA
Sbjct: 167  LAA 169

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 55.7 bits (133), Expect = 2e-08
 Identities = 21/145 (14%), Positives = 33/145 (22%), Gaps = 20/145 (13%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQD 1123
            +     V V     +     AA  G   ++  L +                         
Sbjct: 113  LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA------------- 159

Query: 1124 VSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCRDAQGRNSTPLHLAAGEKRHLLMCR 1182
                     A   AA+ G+L  + +L            Q  N      AA  + H  +  
Sbjct: 160  -----ENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVIN 214

Query: 1183 VTLGKSFLQFNAIKMAHAPPGHHSV 1207
              L    +   A        G   V
Sbjct: 215  FLLDCPVMLAYAEIHE-FEYGEKYV 238

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 53.7 bits (128), Expect = 6e-08
 Identities = 30/306 (9%), Positives = 70/306 (22%), Gaps = 53/306 (17%)

Query: 4   KDVVEYLL-ASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLH 62
           +++ ++ + A+  S+          +    +     V +LL    A+ N      ++  H
Sbjct: 25  ENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAH 84

Query: 63  EAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEG 121
           +   K +    +    A                 GC    D  C L        +   E 
Sbjct: 85  KKGIKSEVICFVA---AIT---------------GCSSALDTLCLLLTSDEIVKVIQAEN 126

Query: 122 QTPLDLTVA----EDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGD---NVSLP 174
                L         +  L + A  +           +    ++  +    +    ++  
Sbjct: 127 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPT 186

Query: 175 PPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLI 234
                  +                 +   ++     +A       +   YG   V   + 
Sbjct: 187 EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA---YAEIHEFEYGEKYVNPFIA 243

Query: 235 KAGANVNAM-----------------------DLWQFTPLHEAASKSRLEVCSLLLSEGA 271
           +    +  M                         +    L     +  L+    LLS   
Sbjct: 244 RHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPG 303

Query: 272 DPTLHN 277
              L  
Sbjct: 304 IKALAP 309

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 48.3 bits (114), Expect = 4e-06
 Identities = 15/91 (16%), Positives = 25/91 (27%), Gaps = 15/91 (16%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVS 1125
               +  +   +    L     +   D +R LL      +        P D          
Sbjct: 268  VTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP-TATIPGD---------- 316

Query: 1126 DLLRGNSALLDAAKKGNLGRVQKLLTADNIN 1156
                 N  L  A + GN G    LL+  ++ 
Sbjct: 317  ----ANELLRLALRLGNQGACALLLSIPSVL 343

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 46.8 bits (110), Expect = 1e-05
 Identities = 16/158 (10%), Positives = 35/158 (22%), Gaps = 37/158 (23%)

Query: 1064 VKHGANVN---VADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL---- 1116
             +         +     +     A  +G  +++  LL      +          +     
Sbjct: 181  CELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNP 240

Query: 1117 -------------------VREGDQDVSD------LLRGNSALLDAAKKGNLGRVQKLLT 1151
                                 +G  D+               L+    +  L  ++ LL+
Sbjct: 241  FIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLS 300

Query: 1152 A----DNINCRDAQGRNSTPLHLAAGEKRHLLMCRVTL 1185
                          G  +  L LA     +   C + L
Sbjct: 301  IPGIKALAPTATIPGDANELLRLAL-RLGNQGACALLL 337

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 25/239 (10%), Positives = 52/239 (21%), Gaps = 42/239 (17%)

Query: 1   YGRKDVVEYLLASGASIHARD--DGGLHPLHNACSFGHADVVRLLLEADANPN---TRDN 55
            G   V+  L     +           H    A   GH  V+  L E          +  
Sbjct: 136 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAE 195

Query: 56  WNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPF 115
             +     A  +G  +V    +  +                     K  + ++A   +  
Sbjct: 196 NYYAFRWAAVGRGHHNVI--NFLLDCPVMLAYAEIHE----FEYGEKYVNPFIARHVN-- 247

Query: 116 LKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPP 175
            + +E      L+  + V  L+  +                   +               
Sbjct: 248 -RLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRR----NDEVLLDD-------- 294

Query: 176 PAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLI 234
             ++  S                     + P+          L  A   G+     +L+
Sbjct: 295 -IRFLLSIPGIK---------------ALAPTATIPGDANELLRLALRLGNQGACALLL 337

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 42.6 bits (99), Expect = 2e-04
 Identities = 9/50 (18%), Positives = 13/50 (26%), Gaps = 5/50 (10%)

Query: 1   YGRKDVVEYLLASGA-----SIHARDDGGLHPLHNACSFGHADVVRLLLE 45
               D + +LL+                    L  A   G+     LLL 
Sbjct: 289 EVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS 338

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.8 bits (213), Expect = 1e-19
 Identities = 44/250 (17%), Positives = 76/250 (30%), Gaps = 27/250 (10%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDG 603
           G  PLH A   G+      LV                          Q G ++++ N   
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNL----------------------FQQGGRELDIYNNLR 40

Query: 604 KTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMF 663
           +T L LAV  T   +            A    G    +      +     +         
Sbjct: 41  QTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGT 100

Query: 664 MPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT--PLHCAVTSPYPKRK 721
           +      + G   L      +     + L     +           PL  AV +      
Sbjct: 101 LDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLS-- 158

Query: 722 AIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRT 781
            +V+ L++ GA++N +     + +H A+  G L ++ TL+R GA  +L +    T L   
Sbjct: 159 -MVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA 217

Query: 782 ARDDKTQAVR 791
                   +R
Sbjct: 218 RSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (200), Expect = 7e-18
 Identities = 37/245 (15%), Positives = 64/245 (26%), Gaps = 24/245 (9%)

Query: 22  DGGLHPLHNACSFGHADVVRLLL----EADANPNTRDNWNFTPLHEAAAKGKTDVCIGIY 77
           + G  PLH A   G+   V  L+    +     +  +N   TPLH A       V   + 
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60

Query: 78  FAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLL 137
            A  S  +                   +C                       A +   L 
Sbjct: 61  TAGASPMALDRH--------GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLT 112

Query: 138 QDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQP 197
              +A         +          +         L    +              S    
Sbjct: 113 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN------------NSLSMV 160

Query: 198 LALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASK 257
             L          +  G   LH+A   G   +   L+++GA+ +  +    TPL  A S+
Sbjct: 161 QLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 220

Query: 258 SRLEV 262
             +++
Sbjct: 221 RVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (175), Expect = 1e-14
 Identities = 48/223 (21%), Positives = 73/223 (32%), Gaps = 49/223 (21%)

Query: 432 DGRHSTPLHFAAGYNRVAVVEYLL----AHGADVHSKDNATDKWGFTPLHEA-------- 479
           DG   TPLH A     +  V  L+      G ++    +  +    TPLH A        
Sbjct: 2   DGD--TPLHIAVVQGNLPAVHRLVNLFQQGGREL----DIYNNLRQTPLHLAVITTLPSV 55

Query: 480 ------------------------AQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLT 515
                                   A + R+       L  +A      E         L 
Sbjct: 56  VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALH 115

Query: 516 KVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADL 575
                   +TV      G     +   +G  PL +A       + ++L++HGANVN    
Sbjct: 116 VAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMY 175

Query: 576 WKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAV 611
              + LH A+        + L++ GAD +LKN    T L +A 
Sbjct: 176 SGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 218

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (163), Expect = 6e-13
 Identities = 36/243 (14%), Positives = 70/243 (28%), Gaps = 26/243 (10%)

Query: 249 TPLHEAASKSRLEVCSLLLSE----GADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHC 304
           TPLH A  +  L     L++     G +  ++N   ++ + +A                 
Sbjct: 5   TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA----------VITTLPS 54

Query: 305 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATV 364
           ++        S +                        LL        +      +    +
Sbjct: 55  VVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTAL 114

Query: 365 REHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPH 424
               +         L   G +      +   +    S L+ A +  +   + +LL     
Sbjct: 115 HVAVNTECQETVQLLLERGAD-----IDAVDIKSGRSPLIHAVEN-NSLSMVQLLLQHGA 168

Query: 425 IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGR 484
            VN +   G     LH A+G   + +V  L+  GAD     +  +    TPL  A  +  
Sbjct: 169 NVNAQMYSGSS--ALHSASGRGLLPLVRTLVRSGADS----SLKNCHNDTPLMVARSRRV 222

Query: 485 TQL 487
             +
Sbjct: 223 IDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (151), Expect = 2e-11
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query: 6   VVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAA 65
           +V+ LL  GA+++A+   G   LH+A   G   +VR L+ + A+ + ++  N TPL  A 
Sbjct: 159 MVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 218

Query: 66  AKGKTDV 72
           ++   D+
Sbjct: 219 SRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (140), Expect = 6e-10
 Identities = 39/216 (18%), Positives = 65/216 (30%), Gaps = 33/216 (15%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHI---VNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGA 459
           L  A   G++  V RL++        ++  +   +  TPLH A      +VV  L+  GA
Sbjct: 7   LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ--TPLHLAVITTLPSVVRLLVTAGA 64

Query: 460 DVHSKDNATDKWGFTPLH----EAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLT 515
              + D                   +      +       +   D L  L  A       
Sbjct: 65  SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 124

Query: 516 KVKKLVNPQTVNARDTAGRKSTPLHFAA------------------------GLVPLHNA 551
            V+ L+               +PL  A                         G   LH+A
Sbjct: 125 TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSA 184

Query: 552 CSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAK 587
              G   +   LV+ GA+ ++ +    TPL  A ++
Sbjct: 185 SGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 220

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (131), Expect = 7e-09
 Identities = 35/247 (14%), Positives = 71/247 (28%), Gaps = 32/247 (12%)

Query: 214 GLVPLHNACSYGHFEVTEMLIK----AGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSE 269
           G  PLH A   G+      L+      G  ++  +  + TPLH A   +           
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITT----------- 51

Query: 270 GADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFK 329
                      +  +    +     R                   + +       +    
Sbjct: 52  ------LPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA 105

Query: 330 HPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKL 389
             Y G T L   +  +     +  +    ++         +G+S    A++    +  +L
Sbjct: 106 RNYDGLTALHVAVNTECQETVQLLLERGADID---AVDIKSGRSPLIHAVENNSLSMVQL 162

Query: 390 LQE-----PPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAG 444
           L +        +    S L  AS  G + +V  L+ S     + ++      TPL  A  
Sbjct: 163 LLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS-SLKNCHND--TPLMVARS 219

Query: 445 YNRVAVV 451
              + ++
Sbjct: 220 RRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (127), Expect = 3e-08
 Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 6/211 (2%)

Query: 924  RKLWERYVHRRAEV--ADENGGQA-HERMLFHGSPFINAIVQKGFDERHAIRYVHRRAEV 980
             +L   +     E+   +       H  ++      +  +V  G       R+    A +
Sbjct: 20   HRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL 79

Query: 981  ADENGGQAHER-MLFHGSPFINAIVQKGFDERHAYIGGMFGAGKRVWLGDVKQGVDQLSM 1039
            A E+      R +L   +P    +  + +D   A    +    +      +++G D  ++
Sbjct: 80   ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAV 139

Query: 1040 AGGLETGTKKKKKNMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH 1099
                              ++    ++HGANVN       + LH A+ +G   +VR L++ 
Sbjct: 140  DIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRS 199

Query: 1100 GADPSKKNRDGATPLDLVREGDQDVSDLLRG 1130
            GAD S KN    TPL + R   + V D+LRG
Sbjct: 200  GADSSLKNCHNDTPLMVARS--RRVIDILRG 228

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (123), Expect = 9e-08
 Identities = 43/240 (17%), Positives = 78/240 (32%), Gaps = 38/240 (15%)

Query: 59  TPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKN 118
           TPLH A  +G       +                            + +   G +  + N
Sbjct: 5   TPLHIAVVQGNLPAVHRLV---------------------------NLFQQGGRELDIYN 37

Query: 119 QEGQTPLDLTVAEDVRSLLQDAMAQYPGA-------PSCAETASVPPPSQYSNTSCGDNV 171
              QTPL L V   + S+++  +              + A  A                 
Sbjct: 38  NLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAA 97

Query: 172 SLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSG----QAVALGLVPLHNACSYGHF 227
                 +     G +      +      ++ ++          +  G  PL +A      
Sbjct: 98  PGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 157

Query: 228 EVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
            + ++L++ GANVNA      + LH A+ +  L +   L+  GAD +L NCH+ + + VA
Sbjct: 158 SMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA 217

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (122), Expect = 1e-07
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVR 41
            G   +V  L+ SGA    ++     PL  A S    D++R
Sbjct: 187 RGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (111), Expect = 3e-06
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 1079 TPLHEAAAKGKADIVRLLL----QHGADPSKKNRDGATPLDL 1116
            TPLH A  +G    V  L+    Q G +    N    TPL L
Sbjct: 5    TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHL 46

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (93), Expect = 5e-04
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 3/118 (2%)

Query: 24  GLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSS 83
           GL  LH A +    + V+LLLE  A+ +  D  +       A +  +   + +     ++
Sbjct: 110 GLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN 169

Query: 84  KSNQYVYGIGGGTGCPMHKDRSCY---LAHGADPFLKNQEGQTPLDLTVAEDVRSLLQ 138
            + Q   G                   +  GAD  LKN    TPL +  +  V  +L+
Sbjct: 170 VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (90), Expect = 0.001
 Identities = 23/111 (20%), Positives = 34/111 (30%), Gaps = 4/111 (3%)

Query: 1   YGRKDVVEYLL----ASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNW 56
            G    V  L+      G  +   ++    PLH A       VVRLL+ A A+P   D  
Sbjct: 13  QGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRH 72

Query: 57  NFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCY 107
             T  H A           +  +      +       G T   +  +  C 
Sbjct: 73  GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ 123

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (211), Expect = 3e-19
 Identities = 45/217 (20%), Positives = 68/217 (31%), Gaps = 60/217 (27%)

Query: 439 LHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAA 498
            + A       + E +LA  +        TD+   T LH A   G T++   L       
Sbjct: 8   CNLAYSGKLEELKESILADKSLA----TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 63

Query: 499 NDPLRELFEACKGGDLTKVKK-----LVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACS 553
           ND     +            +     L     VNA +  G             PLH A S
Sbjct: 64  NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGC-----------TPLHYAAS 112

Query: 554 YGHYEVTEMLVKHGANVNVADLWKFTPLH------------------------------- 582
              +E+  ML++ GAN +  D ++ T +H                               
Sbjct: 113 KNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTP 172

Query: 583 ---------EAAAKALLQHGADINLKNTDGKTALDLA 610
                       AK L+  GA I ++N + KT L +A
Sbjct: 173 LHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 209

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.6 bits (200), Expect = 9e-18
 Identities = 43/250 (17%), Positives = 74/250 (29%), Gaps = 40/250 (16%)

Query: 28  LHNACSFGHADVVRLLLEAD-ANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSN 86
           + N    G  + ++  + AD +     D  + T LH A + G T++   +          
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 87  QYVYGIGGGTGCPMHKDRSCY--LAHGADPFLKNQEGQTPLDLTVAED----VRSLLQDA 140
                          +D      L  GA     NQ G TPL    +++       LL   
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL--- 123

Query: 141 MAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLAL 200
                                 +N    D+       + +  G         +      L
Sbjct: 124 -------------------EGGANPDAKDHYEATAMHRAAAKG---------NLKMIHIL 155

Query: 201 ETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRL 260
                 +      G  PLH AC     E  ++L+  GA++   +  + TPL   A     
Sbjct: 156 LYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQ-VAKGGLG 214

Query: 261 EVCSLLLSEG 270
            +   ++ EG
Sbjct: 215 LILKRMV-EG 223

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.2 bits (194), Expect = 5e-17
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 5/138 (3%)

Query: 6   VVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAA 65
           +V+ LL  GA ++A +  G  PLH A S    ++  +LLE  ANP+ +D++  T +H AA
Sbjct: 85  IVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAA 144

Query: 66  AKGKTDVCIGIYFAEHS-SKSNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQT 123
           AKG   +   + + + S +  +                + +  L + GA  +++N+E +T
Sbjct: 145 AKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKT 204

Query: 124 PLDLTVA---EDVRSLLQ 138
           PL +        ++ +++
Sbjct: 205 PLQVAKGGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (182), Expect = 2e-15
 Identities = 52/239 (21%), Positives = 81/239 (33%), Gaps = 56/239 (23%)

Query: 358 EEMQATVREHRDN---GQSGGYTALQVAGEN--------SKKLLQEPPSVVDLESQLLEA 406
           EE++ ++   +           TAL  A             +L        D     L  
Sbjct: 17  EELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHI 76

Query: 407 SKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDN 466
           +       + + L      VN  + +G   TPLH+AA  NR  +   LL  GA+     +
Sbjct: 77  AASAGRDEIVKALLGKGAQVNAVNQNGC--TPLHYAASKNRHEIAVMLLEGGANP----D 130

Query: 467 ATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTV 526
           A D +  T +H AA KG  ++  +L                                 + 
Sbjct: 131 AKDHYEATAMHRAAAKGNLKMIHILL----------------------------YYKAST 162

Query: 527 NARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA 585
           N +DT G             PLH AC     E  ++LV  GA++ + +  + TPL  A 
Sbjct: 163 NIQDTEGNT-----------PLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK 210

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (179), Expect = 5e-15
 Identities = 35/215 (16%), Positives = 66/215 (30%), Gaps = 13/215 (6%)

Query: 583 EAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYT 642
           E   +++L   +     + D +TAL  A        +G  +  E L    +         
Sbjct: 17  EELKESILADKSLATRTDQDSRTALHWAC------SAGHTEIVEFLLQLGVPVNDKDDAG 70

Query: 643 WPLGTTDIGWCSCCCKMELMFM---PRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNF 699
           W                 L+         ++     L  A  +         L       
Sbjct: 71  WSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD 130

Query: 700 KHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDT 759
              +   T +H A      K   I   L+   A  N ++ E   P+HLA D   ++    
Sbjct: 131 AKDHYEATAMHRAAAKGNLKMIHI---LLYYKASTNIQDTEGNTPLHLACDEERVEEAKL 187

Query: 760 LLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL 794
           L+  GA + + +   +T L   A+      ++ ++
Sbjct: 188 LVSQGASIYIENKEEKTPLQ-VAKGGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.2 bits (168), Expect = 1e-13
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 16/135 (11%)

Query: 1053 NMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGAT 1112
            +     +    +  GA VN  +    TPLH AA+K + +I  +LL+ GA+P  K+   AT
Sbjct: 79   SAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEAT 138

Query: 1113 PL-------------DLVREGDQDVSDLLRGNSALLDAAKKGNLGRVQKLLTAD-NINCR 1158
             +              L+            GN+ L  A  +  +   + L++   +I   
Sbjct: 139  AMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIE 198

Query: 1159 DAQGRNSTPLHLAAG 1173
            + + +  TPL +A G
Sbjct: 199  NKEEK--TPLQVAKG 211

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (150), Expect = 3e-11
 Identities = 51/275 (18%), Positives = 75/275 (27%), Gaps = 61/275 (22%)

Query: 218 LHNACSYGHFE-VTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
           + N    G  E + E ++   +     D    T LH A S    E+   LL  G      
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 277 NCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDT 336
           +                           L  A   G    VK  L            G T
Sbjct: 67  DDA---------------------GWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCT 105

Query: 337 PLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSV 396
           P    L      +  E   +  E  A   + +D+      TA+  A              
Sbjct: 106 P----LHYAASKNRHEIAVMLLEGGANP-DAKDH---YEATAMHRAAAK----------- 146

Query: 397 VDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLA 456
                             +  +L       N +D +G   TPLH A    RV   + L++
Sbjct: 147 --------------GNLKMIHILLYYKASTNIQDTEGN--TPLHLACDEERVEEAKLLVS 190

Query: 457 HGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
            GA +       +K   TPL  A       L  ++
Sbjct: 191 QGASI----YIENKEEKTPLQVAKGGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (137), Expect = 2e-09
 Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 33/154 (21%)

Query: 676 LLEACRQGDPSRVKKFLTSD--VVNFKHPYTGDTPLHCAVTS------------------ 715
           +      G    +K+ + +D  +          T LH A ++                  
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQD-SRTALHWACSAGHTEIVEFLLQLGVPVND 65

Query: 716 ------------PYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL 763
                           R  IV++L+ KGA +N  N+    P+H AA     ++   LL  
Sbjct: 66  KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 125

Query: 764 GAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN 797
           GA  +  D    TA+HR A     + + +LL + 
Sbjct: 126 GANPDAKDHYEATAMHRAAAKGNLKMIHILLYYK 159

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (130), Expect = 1e-08
 Identities = 17/63 (26%), Positives = 32/63 (50%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDLVREGDQDVS 1125
            + A+ N+ D    TPLH A  + + +  +LL+  GA    +N++  TPL + + G   + 
Sbjct: 158  YKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLIL 217

Query: 1126 DLL 1128
              +
Sbjct: 218  KRM 220

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (128), Expect = 2e-08
 Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 33/107 (30%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKS--------------- 258
           G  PLH A S    E+  ML++ GAN +A D ++ T +H AA+K                
Sbjct: 103 GCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAST 162

Query: 259 ------------------RLEVCSLLLSEGADPTLHNCHSKSAIDVA 287
                             R+E   LL+S+GA   + N   K+ + VA
Sbjct: 163 NIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA 209

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 5e-07
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLE 45
             R +  + L++ GASI+  +     PL  A   G   +++ ++E
Sbjct: 179 EERVEEAKLLVSQGASIYIENKEEKTPLQVAKG-GLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.8 bits (115), Expect = 1e-06
 Identities = 29/68 (42%), Positives = 42/68 (61%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH 276
           PLH A S G  E+ + L+  GA VNA++    TPLH AASK+R E+  +LL  GA+P   
Sbjct: 73  PLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAK 132

Query: 277 NCHSKSAI 284
           + +  +A+
Sbjct: 133 DHYEATAM 140

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (95), Expect = 3e-04
 Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 1064 VKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQ 1098
            V  GA++ + +  + TPL   A  G   I++ +++
Sbjct: 189  VSQGASIYIENKEEKTPLQ-VAKGGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 5e-04
 Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 4/53 (7%)

Query: 1131 NSALLDAAKKGNLGRVQKLLTAD--NINCRDAQGRNSTPLHLAAGEKRHLLMC 1181
            N  + + A  G L  +++ + AD       D   R  T LH A       ++ 
Sbjct: 4    NLMVCNLAYSGKLEELKESILADKSLATRTDQDSR--TALHWACSAGHTEIVE 54

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 0.002
 Identities = 7/35 (20%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 1081 LHEAAAKGKADIVR-LLLQHGADPSKKNRDGATPL 1114
            +   A  GK + ++  +L   +  ++ ++D  T L
Sbjct: 7    VCNLAYSGKLEELKESILADKSLATRTDQDSRTAL 41

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 80.2 bits (196), Expect = 3e-17
 Identities = 38/256 (14%), Positives = 72/256 (28%), Gaps = 33/256 (12%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTA 606
           PLH AC    +   + L                         L    + +  K+ DG+  
Sbjct: 3   PLHQACMENEFFKVQEL-------------------------LHSKPSLLLQKDQDGRIP 37

Query: 607 LDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPR 666
           L  +V      ++     +                 + +  +           +    P 
Sbjct: 38  LHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD 97

Query: 667 IKDEFKGH--CLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIV 724
           +         CL  A  +      +  + +             PLH    +     K I 
Sbjct: 98  LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHR--AASVGSLKLIE 155

Query: 725 ESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLL-RLGAKVNLVDVLGQTALHRTAR 783
                  + +N ++K+   P+  A   GH D    L+ + GA+ +LVD  G  A      
Sbjct: 156 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 215

Query: 784 DDKTQAVRVLLSHNAD 799
           +      +  L++  D
Sbjct: 216 EQ---VKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.4 bits (186), Expect = 5e-16
 Identities = 34/252 (13%), Positives = 65/252 (25%), Gaps = 32/252 (12%)

Query: 27  PLHNACSFGHADVVRLLLEAD-ANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKS 85
           PLH AC       V+ LL +  +    +D     PLH + +    ++   +     +   
Sbjct: 3   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 62

Query: 86  NQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYP 145
           + Y    G           +  +                             +       
Sbjct: 63  DDYPDDSGWTPFHIACSVGNLEVVKSLYD-----------------------RPLKPDLN 99

Query: 146 GAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIM 205
              +   T       +         +      +              S      +E +  
Sbjct: 100 KITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 159

Query: 206 PSGQAV----ALGLVPLHNACSYGHFEVTEMLI-KAGANVNAMDLWQFTPLHEAASKSRL 260
               AV      G  PL +A + GH +   +L+ K GA  + +D         A ++   
Sbjct: 160 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE--- 216

Query: 261 EVCSLLLSEGAD 272
           +V    L+   D
Sbjct: 217 QVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.4 bits (186), Expect = 6e-16
 Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 16/218 (7%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVH 462
           L +A    +   V  LL S P ++  +D DGR   PLH++  +    +  +LL+   +V+
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGR--IPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 463 SKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVN 522
             D   D          +      + +L         + +      C    + K    V+
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 523 PQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHG-ANVNVADLWKFTPL 581
              +    +   K          +PLH A S G  ++ E+L   G + VN  D   +TPL
Sbjct: 122 QFLIENGASVRIKDKF-----NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPL 176

Query: 582 HEAAAKA--------LLQHGADINLKNTDGKTALDLAV 611
             A A+         + ++GA+ +L +  G  A D+A+
Sbjct: 177 FHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 214

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.5 bits (163), Expect = 6e-13
 Identities = 43/273 (15%), Positives = 64/273 (23%), Gaps = 56/273 (20%)

Query: 217 PLHNACSYGHFE-VTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTL 275
           PLH AC    F  V E+L    + +   D     PLH + S    E+ S LLS+      
Sbjct: 3   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM----- 57

Query: 276 HNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGD 335
            N +     D +         S            R   P   K                 
Sbjct: 58  ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW 117

Query: 336 TPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPS 395
             +   L+ +                                 L  A             
Sbjct: 118 FEVSQFLIEN-------------------GASVRIKDKFNQIPLHRAASVG--------- 149

Query: 396 VVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLL 455
                           + ++  L       VN +D  G   TPL  A           L+
Sbjct: 150 ---------------SLKLIELLCGLGKSAVNWQDKQGW--TPLFHALAEGHGDAAVLLV 192

Query: 456 -AHGADVHSKDNATDKWGFTPLHEAAQKGRTQL 487
             +GA+     +  D  G      A  +   + 
Sbjct: 193 EKYGAEY----DLVDNKGAKAEDVALNEQVKKF 221

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.8 bits (117), Expect = 5e-07
 Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 1053 NMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLL-QHGADPSKKNRDGA 1111
                  +        + VN  D   +TPL  A A+G  D   LL+ ++GA+    +  GA
Sbjct: 148  VGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA 207

Query: 1112 TPLDLVREGDQDVSDLLRGNSALLDA 1137
               D+    ++ V      N    DA
Sbjct: 208  KAEDVAL--NEQVKKFFLNNVV--DA 229

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.7 bits (114), Expect = 1e-06
 Identities = 41/251 (16%), Positives = 76/251 (30%), Gaps = 43/251 (17%)

Query: 59  TPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKN 118
            PLH+A  + +                                  +    +  +    K+
Sbjct: 2   YPLHQACMENEFFKV------------------------------QELLHSKPSLLLQKD 31

Query: 119 QEGQTPLDLTVA-----------EDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSC 167
           Q+G+ PL  +V+             + ++  D      G        SV       +   
Sbjct: 32  QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD 91

Query: 168 GDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHF 227
                        G     +++          L               +PLH A S G  
Sbjct: 92  RPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 151

Query: 228 EVTEMLIKAGAN-VNAMDLWQFTPLHEAASKSRLEVCSLLLSE-GADPTLHNCHSKSAID 285
           ++ E+L   G + VN  D   +TPL  A ++   +   LL+ + GA+  L +     A D
Sbjct: 152 KLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAED 211

Query: 286 VAPTRELQQRL 296
           VA   ++++  
Sbjct: 212 VALNEQVKKFF 222

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.9 bits (112), Expect = 2e-06
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 1079 TPLHEAAAKGKADIVRLLL-QHGADPSKKNRDGATPLDL 1116
             PLH+A  + +   V+ LL    +   +K++DG  PL  
Sbjct: 2    YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHW 40

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.4 bits (103), Expect = 3e-05
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 1131 NSALLDAAKKGNLGRVQKLLTA--DNINCRDAQGRNSTPLHLAAGEKRHLLMC 1181
            N  L  A  +    +VQ+LL +    +  +D  GR   PLH +   + H +  
Sbjct: 1    NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGR--IPLHWSVSFQAHEITS 51

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.0 bits (102), Expect = 4e-05
 Identities = 24/133 (18%), Positives = 40/133 (30%), Gaps = 8/133 (6%)

Query: 1   YGRKDVVEYLLAS-GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
                 V+ LL S  + +  +D  G  PLH + SF   ++   LL    N N  D  + +
Sbjct: 10  ENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDS 69

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCY-------LAHGA 112
                           +                  G  C        +       + +GA
Sbjct: 70  GWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGA 129

Query: 113 DPFLKNQEGQTPL 125
              +K++  Q PL
Sbjct: 130 SVRIKDKFNQIPL 142

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.0 bits (102), Expect = 5e-05
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 17  IHARDDGGLHPLHNACSFGHADVVRLLLEAD-ANPNTRDNWNFTPLHEAAAK 67
           ++ +D  G  PL +A + GH D   LL+E   A  +  DN        A  +
Sbjct: 165 VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 216

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.3 bits (95), Expect = 4e-04
 Identities = 10/50 (20%), Positives = 15/50 (30%), Gaps = 4/50 (8%)

Query: 1   YGRKDVVEYLL-ASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN 49
            G  D    L+   GA     D+ G      A    +  V +  L    +
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.9 bits (187), Expect = 4e-16
 Identities = 40/192 (20%), Positives = 61/192 (31%), Gaps = 18/192 (9%)

Query: 432 DGRHSTPLHFAAGYNRVA----VVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQL 487
           DG   + LH A  +   A    V+  +    A +    N  +    TPLH A    + ++
Sbjct: 1   DGD--SFLHLAIIHEEKALTMEVIRQVKGDLAFL----NFQNNLQQTPLHLAVITNQPEI 54

Query: 488 SALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVP 547
           +  L  +                          V   T +                G   
Sbjct: 55  AEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTC 114

Query: 548 LHNACSYGHYEVTEMLVKHGANVNVADLWK-FTPLH-------EAAAKALLQHGADINLK 599
           LH A  +G+  + E+LV  GA+VN  +     T LH             LL+ GAD+N  
Sbjct: 115 LHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 174

Query: 600 NTDGKTALDLAV 611
              G +   L  
Sbjct: 175 TYQGYSPYQLTW 186

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (158), Expect = 2e-12
 Identities = 39/260 (15%), Positives = 66/260 (25%), Gaps = 62/260 (23%)

Query: 544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDG 603
           G   LH A  +    +T  +++                       +    A +N +N   
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQ----------------------VKGDLAFLNFQNNLQ 39

Query: 604 KTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKM---E 660
           +T L LAV   +  ++            R   G    +                      
Sbjct: 40  QTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPH 99

Query: 661 LMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYT-GDTPLHCAVTSPYPK 719
           L  + +  +     CL  A   G    V+  ++            G T LH AV      
Sbjct: 100 LHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ--- 156

Query: 720 RKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALH 779
                                            + D++  LL+ GA VN V   G +   
Sbjct: 157 ---------------------------------NPDLVSLLLKCGADVNRVTYQGYSPYQ 183

Query: 780 RTARDDKTQAVRVLLSHNAD 799
            T     T+  + L     +
Sbjct: 184 LTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (130), Expect = 1e-08
 Identities = 29/244 (11%), Positives = 59/244 (24%), Gaps = 42/244 (17%)

Query: 59  TPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKN 118
           + LH A    +  + + +                                   A    +N
Sbjct: 4   SFLHLAIIHEEKALTMEVI---------------------------RQVKGDLAFLNFQN 36

Query: 119 QEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSN------TSCGDNVS 172
              QTPL L V  +   + +  +             + P                  + +
Sbjct: 37  NLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCT 96

Query: 173 LPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQ-------AVALGLVPLHNACSYG 225
            P       +   +             L  V +               G   LH A    
Sbjct: 97  TPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 156

Query: 226 HFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADP--TLHNCHSKSA 283
           + ++  +L+K GA+VN +    ++P      +    +   L     +    L     + +
Sbjct: 157 NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEES 216

Query: 284 IDVA 287
            D  
Sbjct: 217 YDTE 220

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (124), Expect = 6e-08
 Identities = 29/225 (12%), Positives = 54/225 (24%), Gaps = 22/225 (9%)

Query: 24  GLHPLHNACSFGHAD----VVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFA 79
           G   LH A           V+R +    A  N ++N   TPLH A    + ++   +  A
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61

Query: 80  EHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQD 139
               +   +          P+H               ++        +  A +       
Sbjct: 62  GCDPELRDFRG------NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCL 115

Query: 140 AMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLA 199
            +A   G     E          +   C    +L            S+ L   +    + 
Sbjct: 116 HLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT 175

Query: 200 LETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMD 244
            +            G  P           + + L +       M 
Sbjct: 176 YQ------------GYSPYQLTWGRPSTRIQQQLGQLTLENLQML 208

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (113), Expect = 2e-06
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 6/86 (6%)

Query: 406 ASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD 465
           AS  G + +V  L+S    +      +GR  T LH A       +V  LL  GAD     
Sbjct: 118 ASIHGYLGIVELLVSLGADVNAQEPCNGR--TALHLAVDLQNPDLVSLLLKCGAD----V 171

Query: 466 NATDKWGFTPLHEAAQKGRTQLSALL 491
           N     G++P      +  T++   L
Sbjct: 172 NRVTYQGYSPYQLTWGRPSTRIQQQL 197

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (112), Expect = 2e-06
 Identities = 8/44 (18%), Positives = 16/44 (36%)

Query: 1066 HGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRD 1109
             GA+VN      ++P      +    I + L Q   +  +   +
Sbjct: 167  CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPE 210

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (108), Expect = 7e-06
 Identities = 23/216 (10%), Positives = 48/216 (22%), Gaps = 20/216 (9%)

Query: 249 TPLHEAASKSRLEVC----SLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHC 304
           + LH A       +       +  + A     N   ++ + +A      +         C
Sbjct: 4   SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63

Query: 305 LLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATV 364
             E       + +        +      T     P    I   ++      +        
Sbjct: 64  DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 123

Query: 365 REHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPH 424
               +   S G         N +  L     + + +   L    G D+            
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV------------ 171

Query: 425 IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD 460
             N     G   +P     G     + + L     +
Sbjct: 172 --NRVTYQGY--SPYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (107), Expect = 9e-06
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 1   YGRKDVVEYLLASGASI-HARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
           +G   +VE L++ GA +       G   LH A    + D+V LLL+  A+ N      ++
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180

Query: 60  PLHEAAAKGKTDV 72
           P      +  T +
Sbjct: 181 PYQLTWGRPSTRI 193

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (103), Expect = 3e-05
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 214 GLVPLHNACSYGHFEVTEMLIK----AGANVNAMDLWQFTPLHEA 254
           G   LH A  +    +T  +I+      A +N  +  Q TPLH A
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA 46

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (102), Expect = 4e-05
 Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 1079 TPLHEAAAKGKAD----IVRLLLQHGADPSKKNRDGATPL 1114
            + LH A    +      ++R +    A  + +N    TPL
Sbjct: 4    SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPL 43

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (101), Expect = 5e-05
 Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 5/63 (7%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADAN-----PNTRDN 55
               D+V  LL  GA ++     G  P           + + L +         P + D 
Sbjct: 155 LQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDE 214

Query: 56  WNF 58
            ++
Sbjct: 215 ESY 217

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (99), Expect = 1e-04
 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 1076 WKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VREGDQDVSDLL 1128
               T LH A      D+V LLL+ GAD ++    G +P  L        +   L
Sbjct: 144  NGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQL 197

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (92), Expect = 7e-04
 Identities = 28/185 (15%), Positives = 50/185 (27%), Gaps = 45/185 (24%)

Query: 4   KDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNF----- 58
            +V+  +    A ++ +++    PLH A      ++   LL A  +P  RD         
Sbjct: 19  MEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL 78

Query: 59  ----------------------------------TPLHEAAAKGKTDVCIGIYFAEHSSK 84
                                             T LH A+  G   +   +        
Sbjct: 79  ACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN 138

Query: 85  SNQYVYG---IGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVA---EDVRSLLQ 138
           + +   G   +            S  L  GAD      +G +P  LT       ++  L 
Sbjct: 139 AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLG 198

Query: 139 DAMAQ 143
               +
Sbjct: 199 QLTLE 203

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 72.9 bits (177), Expect = 5e-15
 Identities = 40/197 (20%), Positives = 63/197 (31%), Gaps = 38/197 (19%)

Query: 450 VVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEAC 509
           V+  LLA GA++++     DK G T LH AA+  R   +  L  + + AN          
Sbjct: 4   VISDLLAQGAELNAT---MDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPL 60

Query: 510 KGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAA-------------------------- 543
                     +      N       +                                  
Sbjct: 61  HAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAAD 120

Query: 544 --GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLH-------EAAAKALLQHGA 594
             G   LH A +  + E   +L+ H AN +  D    TPL          A+KALL + A
Sbjct: 121 NSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFA 180

Query: 595 DINLKNTDGKTALDLAV 611
           +  + +   +   D+A 
Sbjct: 181 NREITDHMDRLPRDVAS 197

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 70.6 bits (171), Expect = 4e-14
 Identities = 34/231 (14%), Positives = 54/231 (23%), Gaps = 25/231 (10%)

Query: 37  ADVVRLLLEADANPN-TRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGG 95
           A V+  LL   A  N T D    T LH AA   + D    +  A   + S          
Sbjct: 2   AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLH 61

Query: 96  TGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETAS 155
                       +         N                            A    E   
Sbjct: 62  AAVAADAMGVFQILLRNRATNLNARMH---------------DGTTPLILAARLAIEGMV 106

Query: 156 VPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGL 215
               +  ++ +  DN         +                    +     +        
Sbjct: 107 EDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDET-------- 158

Query: 216 VPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLL 266
            PL  A   G +E ++ L+   AN    D     P   A+ +   ++  LL
Sbjct: 159 -PLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 69.8 bits (169), Expect = 8e-14
 Identities = 32/209 (15%), Positives = 56/209 (26%), Gaps = 9/209 (4%)

Query: 558 EVTEMLVKHGANVNV-ADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRA 616
           +V   L+  GA +N   D    T LH AA  A       +     D  +  +       A
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 617 VLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFM-----PRIKDEF 671
            ++ D      +           R         +        M    +         D  
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 672 KGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKG 731
               L  A    +   V   L             +TPL     +         ++L+   
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFL---AAREGSYEASKALLDNF 179

Query: 732 AHLNEKNKELLAPIHLAADLGHLDVLDTL 760
           A+    +     P  +A++  H D++  L
Sbjct: 180 ANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 62.9 bits (151), Expect = 2e-11
 Identities = 34/212 (16%), Positives = 64/212 (30%), Gaps = 14/212 (6%)

Query: 587 KALLQHGADINLK-NTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPL 645
             LL  GA++N   +  G+T+L LA               + L  A              
Sbjct: 6   SDLLAQGAELNATMDKTGETSLHLAA------RFARADAAKRLLDAGADANSQDNTGRTP 59

Query: 646 GTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVK---KFLTSDVVNFKHP 702
               +   +      L+         + H             ++   + L +   +    
Sbjct: 60  LHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAA 119

Query: 703 -YTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLL 761
             +G T LH    +        V  L+   A+ + ++ +   P+ LAA  G  +    LL
Sbjct: 120 DNSGKTALHW---AAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALL 176

Query: 762 RLGAKVNLVDVLGQTALHRTARDDKTQAVRVL 793
              A   + D + +      +       VR+L
Sbjct: 177 DNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 56.0 bits (133), Expect = 4e-09
 Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 4/126 (3%)

Query: 4   KDVVEYLLASGASIHAR-DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLH 62
             V+  LLA GA ++A  D  G   LH A  F  AD  + LL+A A+ N++DN   TPLH
Sbjct: 2   AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLH 61

Query: 63  EAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCY---LAHGADPFLKNQ 119
            A A     V   +     ++ + +   G                   +   AD    + 
Sbjct: 62  AAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADN 121

Query: 120 EGQTPL 125
            G+T L
Sbjct: 122 SGKTAL 127

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 54.8 bits (130), Expect = 1e-08
 Identities = 36/228 (15%), Positives = 56/228 (24%), Gaps = 23/228 (10%)

Query: 228 EVTEMLIKAGANVNA-MDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDV 286
           +V   L+  GA +NA MD    T LH AA  +R +    L             +      
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL------LDAGADANSQDNTG 56

Query: 287 APTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDL 346
                             LL        +R+    T  ++  +    G      T   D+
Sbjct: 57  RTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADI 116

Query: 347 LSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEA 406
            + D    T      A       N     +       +  +  L         E      
Sbjct: 117 NAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYE------ 170

Query: 407 SKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYL 454
                      LL +  +     D   R   P   A+      +V  L
Sbjct: 171 -------ASKALLDNFANR-EITDHMDR--LPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 52.9 bits (125), Expect = 4e-08
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 1061 PHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGATPLDL-VRE 1119
               + H AN +  D    TPL  AA +G  +  + LL + A+    +     P D+    
Sbjct: 140  NILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASER 199

Query: 1120 GDQDVSDLL 1128
               D+  LL
Sbjct: 200  LHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 52.1 bits (123), Expect = 6e-08
 Identities = 19/73 (26%), Positives = 30/73 (41%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
               + V  LL   A+  A+DD    PL  A   G  +  + LL+  AN    D+ +  P
Sbjct: 133 VNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLP 192

Query: 61  LHEAAAKGKTDVC 73
              A+ +   D+ 
Sbjct: 193 RDVASERLHHDIV 205

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 51.7 bits (122), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLL 43
            G  +  + LL + A+    D     P   A    H D+VRLL
Sbjct: 166 EGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 47.9 bits (112), Expect = 2e-06
 Identities = 37/188 (19%), Positives = 63/188 (33%), Gaps = 8/188 (4%)

Query: 108 LAHGADPFLK-NQEGQTPLDLTVA---EDVRSLLQDAMAQYPGAPSCAETASVPPPSQYS 163
           LA GA+     ++ G+T L L       D    L DA A      +   T      +  +
Sbjct: 9   LAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADA 68

Query: 164 NTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAV----ALGLVPLH 219
                  +        +     +  L   +      +   ++ +   +      G   LH
Sbjct: 69  MGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALH 128

Query: 220 NACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCH 279
            A +  + E   +L+   AN +A D    TPL  AA +   E    LL   A+  + +  
Sbjct: 129 WAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHM 188

Query: 280 SKSAIDVA 287
            +   DVA
Sbjct: 189 DRLPRDVA 196

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 43.6 bits (101), Expect = 6e-05
 Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 2/104 (1%)

Query: 26  HPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTD-VCIGIYFAEHSSK 84
            PL  A       +V  L+ ADA+ N  DN   T LH AAA   T+ V I +    +   
Sbjct: 92  TPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDA 151

Query: 85  SNQYVYGIGGGTGCPMHKDRSCYL-AHGADPFLKNQEGQTPLDL 127
            +                + S  L  + A+  + +   + P D+
Sbjct: 152 QDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDV 195

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 39.4 bits (90), Expect = 0.001
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 1064 VKHGANVNV-ADLWKFTPLHEAAAKGKADIVRLLLQH 1099
            +  GA +N   D    T LH AA   +AD  + LL  
Sbjct: 9    LAQGAELNATMDKTGETSLHLAARFARADAAKRLLDA 45

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 38.6 bits (88), Expect = 0.002
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 1090 ADIVRLLLQHGADP-SKKNRDGATPLDL-VREGDQDVSDLL 1128
            A ++  LL  GA+  +  ++ G T L L  R    D +  L
Sbjct: 2    AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.9 bits (136), Expect = 6e-10
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 6/132 (4%)

Query: 674 HCLLEACRQGDPSRVKKFLTSDV-VNFKHPYT-----GDTPLHCAVTSPYPKRKAIVESL 727
           H L EA +  D   + +     V +  K P        +T LH AV S       IV+ L
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 728 IRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKT 787
           ++   +L+++  +    +H      + + L  LLR  A + + +  G+T L    R    
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127

Query: 788 QAVRVLLSHNAD 799
               +L    + 
Sbjct: 128 HCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.8 bits (128), Expect = 7e-09
 Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 5/135 (3%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKD--NATDKWGFTPLHEAAQKGRTQLSALLPLS 494
             L  A     +  +    A G D+  K       +   T LH A +        ++   
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 495 PSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSY 554
              + +  ++  +         +        +  R  A  +   +   +G  PL  A   
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE---IANESGETPLDIAKRL 124

Query: 555 GHYEVTEMLVKHGAN 569
            H    E+L +  + 
Sbjct: 125 KHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.9 bits (123), Expect = 3e-08
 Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 22/127 (17%)

Query: 499 NDPLRELFEACKGGDLTKVKKLVN-------PQTVNARDTAGRKSTPLHFAAGLVPLHNA 551
              L  L EA K  D+  + +             +          T LH A        +
Sbjct: 4   AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDE--TALHLAV------RS 55

Query: 552 CSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAK-------ALLQHGADINLKNTDGK 604
                  + + LV++  N++       T LH             LL+  A I + N  G+
Sbjct: 56  VDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGE 115

Query: 605 TALDLAV 611
           T LD+A 
Sbjct: 116 TPLDIAK 122

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.1 bits (108), Expect = 3e-06
 Identities = 21/138 (15%), Positives = 37/138 (26%), Gaps = 14/138 (10%)

Query: 19  ARDDGGLHPLHNACSFGHADVVRLLLEADANPNTR------DNWNFTPLHEAAAKGKTDV 72
           A     LH L  A        +        +   +         + T LH A        
Sbjct: 1   ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS 60

Query: 73  -----CIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDL 127
                 +         ++ +    +         +     L   A   + N+ G+TPLD+
Sbjct: 61  LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 120

Query: 128 TVA---EDVRSLLQDAMA 142
                 E    LL  A++
Sbjct: 121 AKRLKHEHCEELLTQALS 138

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.3 bits (98), Expect = 6e-05
 Identities = 9/51 (17%), Positives = 16/51 (31%)

Query: 1053 NMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADP 1103
                       ++  A++ +A+    TPL  A          LL Q  +  
Sbjct: 90   LTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 140

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.9 bits (97), Expect = 1e-04
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 14  GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANP-NTRDNWNF 58
            ASI   ++ G  PL  A    H     LL +A +   N+  +  +
Sbjct: 104 KASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEY 149

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.7 bits (94), Expect = 2e-04
 Identities = 15/73 (20%), Positives = 29/73 (39%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
                +V++L+ +  ++  +   G   LH  C   +A+ ++LLL   A+    +    TP
Sbjct: 58  RTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETP 117

Query: 61  LHEAAAKGKTDVC 73
           L  A         
Sbjct: 118 LDIAKRLKHEHCE 130

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.8 bits (89), Expect = 0.001
 Identities = 12/61 (19%), Positives = 22/61 (36%)

Query: 219 HNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNC 278
           H  C   + E  ++L++  A++   +    TPL  A          LL    +     + 
Sbjct: 86  HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHV 145

Query: 279 H 279
           H
Sbjct: 146 H 146

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (133), Expect = 8e-10
 Identities = 19/127 (14%), Positives = 38/127 (29%), Gaps = 8/127 (6%)

Query: 25  LHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSK 84
           L  L ++   G  D+V+ ++    +P+  ++   T LH A   G T++   +     +  
Sbjct: 2   LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61

Query: 85  SNQYVYGIGGGTGCPMHKD--RSCYLAHGADPFLKN-QEGQTPLDLTVA-----EDVRSL 136
           +               +        +  GA  F     + QT  D               
Sbjct: 62  AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121

Query: 137 LQDAMAQ 143
           L     +
Sbjct: 122 LYGVQEK 128

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 3e-06
 Identities = 14/116 (12%), Positives = 34/116 (29%), Gaps = 4/116 (3%)

Query: 501 PLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVT 560
           PL  L ++   G+   V++++         +             +   H        +  
Sbjct: 1   PLALLLDSSLEGEFDLVQRIIY---EVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFG 57

Query: 561 EMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKN-TDGKTALDLAVPCTR 615
             +    ++         +  +    K L++ GA +     +D +TA D       
Sbjct: 58  VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEE 113

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 16/135 (11%), Positives = 38/135 (28%), Gaps = 9/135 (6%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPS 496
             L  ++      +V+ ++    D    ++         +     +    L        +
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 497 AANDPLRELFEACKGGDLTKVKKLV-NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYG 555
           A +D    L  A    ++   K LV +   V A   +  + T                 G
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQ-TAAD-------KCEEMEEG 114

Query: 556 HYEVTEMLVKHGANV 570
           + + ++ L      +
Sbjct: 115 YTQCSQFLYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (96), Expect = 8e-05
 Identities = 29/119 (24%), Positives = 42/119 (35%), Gaps = 31/119 (26%)

Query: 403 LLEASKGGDMTVVTRLLSSCPHI------------------------------VNCRDLD 432
           LL++S  G+  +V R++                                    VN    D
Sbjct: 5   LLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD 64

Query: 433 GRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALL 491
               TPLH AA  N V V ++L+  GA V +    +D        E  ++G TQ S  L
Sbjct: 65  SDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTY-SDMQTAADKCEEMEEGYTQCSQFL 122

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (94), Expect = 1e-04
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAM---DLWQFTPLHEAASKSRLEVCSLLLSEG 270
           G  PLH A S  + +V + L+++GA V AM   D+       E   +   +    L    
Sbjct: 67  GWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ 126

Query: 271 A 271
            
Sbjct: 127 E 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 8/38 (21%), Positives = 17/38 (44%)

Query: 215 LVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLH 252
           L  L ++   G F++ + +I    + +  +    T LH
Sbjct: 2   LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALH 39

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.003
 Identities = 8/41 (19%), Positives = 13/41 (31%), Gaps = 3/41 (7%)

Query: 1064 VKHGANVNV---ADLWKFTPLHEAAAKGKADIVRLLLQHGA 1101
            V+ GA V     +D+       E   +G     + L     
Sbjct: 87   VESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 11/127 (8%), Positives = 28/127 (22%), Gaps = 33/127 (25%)

Query: 674 HCLLEACRQGDPSRVKKFL------------------------------TSDVVNFKHPY 703
             LL++  +G+   V++ +                                         
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 704 TGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNK---ELLAPIHLAADLGHLDVLDTL 760
                      +       + + L+  GA +        +  A      + G+      L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 761 LRLGAKV 767
             +  K+
Sbjct: 123 YGVQEKM 129

>d2f3na1 a.60.1.2 (A:2-65) Sh3 and multiple ankyrin repeat domains 3 (Shank3) {Rat(Rattus norvegicus) [TaxId: 10116]} Length = 64

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Sh3 and multiple ankyrin repeat domains 3 (Shank3)
species: Rat(Rattus norvegicus) [TaxId: 10116]

 Score = 50.6 bits (121), Expect = 9e-09
 Identities = 12/49 (24%), Positives = 24/49 (48%)

Query: 815 LGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           + L    + FE  +I    L  +  ED  ++GV+  G+R  + + + +L
Sbjct: 16  IHLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRENIERALRQL 64

>d1ucva_ a.60.1.2 (A:) Ephrin type-A receptor 8, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 81

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Ephrin type-A receptor 8, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (122), Expect = 1e-08
 Identities = 13/81 (16%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 795 SHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYR 853
           S ++  ++   L       ++ +    + F     + L ++  MN +D++ +G++  G++
Sbjct: 3   SGSSGLTVGDWL------DSIRMGRYRDHFAAGGYSSLGMVLRMNAQDVRALGITLMGHQ 56

Query: 854 HKLLKGIEKLCSSPSFSQPGT 874
            K+L  I+ + +  + +Q   
Sbjct: 57  KKILGSIQTMRAQLTSTQGSG 77

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (124), Expect = 2e-08
 Identities = 24/154 (15%), Positives = 37/154 (24%), Gaps = 23/154 (14%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPS 496
             L  AA    +  +  LL +  +V++++               +  R  L         
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 497 AANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLV---------- 546
                      A  G   T    L     VN  D  G     L    G +          
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 547 -------------PLHNACSYGHYEVTEMLVKHG 567
                            A  YG  EV  ++  +G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (122), Expect = 4e-08
 Identities = 31/161 (19%), Positives = 52/161 (32%), Gaps = 15/161 (9%)

Query: 579 TPLHEAAA-------KALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAA 631
             L  AAA        +LLQ+  ++N +N  G+TAL +       +      +    +  
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 632 RMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKF 691
              G  +       G       +    +E      I+D      L  A ++G    V+  
Sbjct: 63  DRTGFAVIHDAARAGF----LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 118

Query: 692 LTSDVVNFKHP-YTGDTPLHCAVTSPYPKRKAIVESLIRKG 731
           +     N  H  + GDT    A       R  +V  +   G
Sbjct: 119 VKHTASNVGHRNHKGDTACDLARLY---GRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (104), Expect = 8e-06
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKNRDG 1110
              L  AAA+G  + +  LLQ+  + + +N  G
Sbjct: 3    NELASAAARGDLEQLTSLLQNNVNVNAQNGFG 34

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 3e-05
 Identities = 33/158 (20%), Positives = 54/158 (34%), Gaps = 4/158 (2%)

Query: 302 GHCLLEACRQGDPSRVKKFLTSDV-VNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEM 360
           G+ L  A  +GD  ++   L ++V VN ++ + G T L    L +     +  +  A   
Sbjct: 2   GNELASAAARGDLEQLTSLLQNNVNVNAQNGF-GRTALQVMKLGNPEIARRLLLRGANPD 60

Query: 361 QATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLS 420
                       +     L       +          +    L  A+K G + VV  L+ 
Sbjct: 61  LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 120

Query: 421 SCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHG 458
                V  R+  G   T    A  Y R  VV  + A+G
Sbjct: 121 HTASNVGHRNHKGD--TACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (99), Expect = 4e-05
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 27 PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLH 62
           L +A + G  + +  LL+ + N N ++ +  T L 
Sbjct: 4  ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ 39

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (96), Expect = 1e-04
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMD 244
            L +A + G  E    L++   NVNA +
Sbjct: 4   ELASAAARGDLEQLTSLLQNNVNVNAQN 31

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (94), Expect = 2e-04
 Identities = 8/40 (20%), Positives = 15/40 (37%)

Query: 1061 PHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHG 1100
                   +NV   +    T    A   G+ ++V L+  +G
Sbjct: 117  FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (90), Expect = 6e-04
 Identities = 24/145 (16%), Positives = 41/145 (28%), Gaps = 5/145 (3%)

Query: 1   YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTP 60
            G  + +  LL +  +++A++  G   L            RLLL                
Sbjct: 11  RGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKDRTGFAVI 70

Query: 61  LHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPF--LKN 118
              A A     +   + F    +  +              H     +L          +N
Sbjct: 71  HDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRN 130

Query: 119 QEGQTPLDLTVA---EDVRSLLQDA 140
            +G T  DL       +V SL+Q  
Sbjct: 131 HKGDTACDLARLYGRNEVVSLMQAN 155

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.4 bits (121), Expect = 5e-08
 Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 11/151 (7%)

Query: 437 TPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPS 496
             L  AA   +   V  L+A+GA        TD  G +PLH AAQ G    + +L  +  
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFT-----TDWLGTSPLHLAAQYGHFSTTEVLLRAGV 58

Query: 497 AANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGH 556
           + +   +                +V     +  D              +  LH A  + H
Sbjct: 59  SRDARTKVDRTPLHMAASEGHANIVEVLLKHGAD------VNAKDMLKMTALHWATEHNH 112

Query: 557 YEVTEMLVKHGANVNVADLWKFTPLHEAAAK 587
            EV E+L+K+GA+V+    +  T    +   
Sbjct: 113 QEVVELLIKYGADVHTQSKFCKTAFDISIDN 143

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.4 bits (108), Expect = 3e-06
 Identities = 17/60 (28%), Positives = 30/60 (50%)

Query: 14  GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVC 73
           GA ++A+D   +  LH A    H +VV LL++  A+ +T+  +  T    +   G  D+ 
Sbjct: 90  GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA 149

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.7 bits (101), Expect = 2e-05
 Identities = 27/189 (14%), Positives = 49/189 (25%), Gaps = 47/189 (24%)

Query: 579 TPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAA 631
             L EAA        + L+ +GA                                     
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFT---------------------------------T 30

Query: 632 RMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKF 691
             +G          G            +      ++              +G  + V+  
Sbjct: 31  DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMA----ASEGHANIVEVL 86

Query: 692 LTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADL 751
           L              T LH A        + +VE LI+ GA ++ ++K       ++ D 
Sbjct: 87  LKHGADVNAKDMLKMTALHWA---TEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDN 143

Query: 752 GHLDVLDTL 760
           G+ D+ + L
Sbjct: 144 GNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.7 bits (101), Expect = 2e-05
 Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 1053 NMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQHGADPSKKNRDGAT 1112
            +  +  +    +KHGA+VN  D+ K T LH A      ++V LL+++GAD   +++   T
Sbjct: 76   SEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT 135

Query: 1113 PLDL-VREGDQDVSDLLR 1129
              D+ +  G++D++++L+
Sbjct: 136  AFDISIDNGNEDLAEILQ 153

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.5 bits (98), Expect = 5e-05
 Identities = 19/100 (19%), Positives = 28/100 (28%), Gaps = 1/100 (1%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNTRDN-WNFTPLHEAAAKGKTDVCIGIYFAEHSSKS 85
            L  A   G  D VR+L+   A   T     +   L        T   +        +++
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64

Query: 86  NQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                 +               L HGAD   K+    T L
Sbjct: 65  KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTAL 104

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.2 bits (97), Expect = 7e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 1079 TPLHEAAAKGKADIVRLLLQHGADPSKKN 1107
              L EAA  G+ D VR+L+ +GA  +   
Sbjct: 4    KKLLEAARAGQDDEVRILMANGAPFTTDW 32

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.8 bits (96), Expect = 9e-05
 Identities = 26/153 (16%), Positives = 44/153 (28%), Gaps = 3/153 (1%)

Query: 302 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQ 361
           G  LLEA R G    V+  + +    F   + G +PL         S  +  +       
Sbjct: 3   GKKLLEAARAGQDDEVRILMANG-APFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61

Query: 362 ATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSS 421
           A  +  R               E   K   +  +   L+   L  +   +   V  LL  
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIK 121

Query: 422 CPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYL 454
               V+ +    +  T    +       + E L
Sbjct: 122 YGADVHTQSKFCK--TAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.0 bits (94), Expect = 2e-04
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 422 CPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQ 481
             H  +    D    T LH+A  +N   VVE L+ +GADV    +   K+  T    +  
Sbjct: 87  LKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADV----HTQSKFCKTAFDISID 142

Query: 482 KGRTQLSALL 491
            G   L+ +L
Sbjct: 143 NGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.6 bits (93), Expect = 2e-04
 Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 4/142 (2%)

Query: 1   YGRKDVVEYLLASGASIHARDDGG-LHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
            G+ D V  L+A+GA       G     L           V L      +  T+ +    
Sbjct: 12  AGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPL 71

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
            +  +         +  + A+ ++K    +  +   T     +     + +GAD   +++
Sbjct: 72  HMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131

Query: 120 EGQTPLDLTVA---EDVRSLLQ 138
             +T  D+++    ED+  +LQ
Sbjct: 132 FCKTAFDISIDNGNEDLAEILQ 153

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.8 bits (91), Expect = 5e-04
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLL 266
            +  LH A  + H EV E+LIK GA+V+    +  T    +      ++  +L
Sbjct: 100 KMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.8 bits (91), Expect = 5e-04
 Identities = 20/182 (10%), Positives = 41/182 (22%), Gaps = 35/182 (19%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTA 606
            L  A   G  +   +L+ +GA                               +  G + 
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPFT---------------------------TDWLGTSP 37

Query: 607 LDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPR 666
           L LA        +    +  +   AR         T        G  +    +       
Sbjct: 38  LHLAAQYGHFSTTEVLLRAGVSRDARTK----VDRTPLHMAASEGHANIVEVLLKHGADV 93

Query: 667 IKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHP-YTGDTPLHCAVTSPYPKRKAIVE 725
              +      L    + +   V + L     +         T    ++ +     + + E
Sbjct: 94  NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDN---GNEDLAE 150

Query: 726 SL 727
            L
Sbjct: 151 IL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.3 bits (87), Expect = 0.002
 Identities = 6/28 (21%), Positives = 9/28 (32%)

Query: 217 PLHNACSYGHFEVTEMLIKAGANVNAMD 244
            L  A   G  +   +L+  GA      
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPFTTDW 32

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.9 bits (117), Expect = 9e-08
 Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 2/114 (1%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHS--SK 84
               A   G  D V+  +    + N        PLH AA  G+ ++   +        + 
Sbjct: 5   EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP 64

Query: 85  SNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQ 138
              ++  +               L+ GAD  +K  +G T L+ T  + +++LLQ
Sbjct: 65  DKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALLQ 118

>d1v38a_ a.60.1.2 (A:) Sam-domain protein samsn-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 78

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Sam-domain protein samsn-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.5 bits (115), Expect = 9e-08
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 815 LGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPS 868
           + L+             LD L ++    L ++ ++    R +LL   E L S PS
Sbjct: 22  IHLQEYTSTLLLNGYETLDDLKDIKESHLIELNIADPEDRARLLSAAESLLSGPS 76

>d1x40a1 a.60.1.2 (A:8-85) Centaurin-delta 1 (Arap2) {Human(Homo sapiens) [TaxId: 9606]} Length = 78

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Centaurin-delta 1 (Arap2)
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 3e-07
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 795 SHNADTSIVSLLVIFSCSTNLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYR 853
               +  I   L       ++ L+  L  F      T+   A +N   L+++G+S  G+R
Sbjct: 4   VSEVNVDIKDFL------MSINLEQYLLHFHESGFTTVKDCAAINDSLLQKIGISPTGHR 57

Query: 854 HKLLKGIEKL 863
            ++LK ++ +
Sbjct: 58  RRILKQLQII 67

>d1dxsa_ a.60.1.2 (A:) C-terminal domain of p73 {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: C-terminal domain of p73
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (109), Expect = 4e-07
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 8/64 (12%)

Query: 801 SIVSLLVIFSCSTNLGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKG 859
           S+VS L      T LG  + +E F  + + ++  L  +  EDL  + +    YR  + +G
Sbjct: 1   SLVSFL------TGLGCPNCIEYFTSQGLQSIYHLQNLTIEDLGALKIPE-QYRMTIWRG 53

Query: 860 IEKL 863
           ++ L
Sbjct: 54  LQDL 57

>d1pk3a1 a.60.1.2 (A:17-79) Polycomb protein Scm {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 63

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Polycomb protein Scm
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 45.7 bits (108), Expect = 6e-07
 Identities = 11/55 (20%), Positives = 22/55 (40%)

Query: 809 FSCSTNLGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           +  S +  L    +LF + +I    L  +N E + +      G   K+   + K+
Sbjct: 9   YIESNDNSLAVHGDLFRKHEIDGKALLRLNSEMMMKYMGLKLGPALKICNLVNKV 63

>d1gs0a2 d.166.1.2 (A:341-557) Poly(ADP-ribose) polymerase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 217

class: Alpha and beta proteins (a+b)
fold: ADP-ribosylation
superfamily: ADP-ribosylation
family: Poly(ADP-ribose) polymerase, C-terminal domain
domain: Poly(ADP-ribose) polymerase, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.3 bits (117), Expect = 7e-07
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 19/95 (20%)

Query: 876 LIDLLSDDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRA 935
           L  L  +  EF  +++ +Q+T                  ++ + +V+     E +     
Sbjct: 5   LRPLDHESNEFKVISQYLQSTHAPTH-------KDYTMTLLDVFEVEKEGEKEAFREDLP 57

Query: 936 EVADENGGQAHERMLFHGSPFIN--AIVQKGFDER 968
                        +L+HGS   N   I+  G    
Sbjct: 58  N----------RMLLWHGSRLSNWVGILSHGLRVA 82

>d1gs0a2 d.166.1.2 (A:341-557) Poly(ADP-ribose) polymerase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 217

class: Alpha and beta proteins (a+b)
fold: ADP-ribosylation
superfamily: ADP-ribosylation
family: Poly(ADP-ribose) polymerase, C-terminal domain
domain: Poly(ADP-ribose) polymerase, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (93), Expect = 8e-04
 Identities = 18/89 (20%), Positives = 23/89 (25%), Gaps = 31/89 (34%)

Query: 1172 AGEKRHLLMCRVTLGKSFLQFNAIKMAHAPP-GHHSVMGR-------------------- 1210
                  LL+  V LG+      A   A     G HS  G                     
Sbjct: 115  LKNTGLLLLSEVALGQCNELLEANPKAQGLLRGKHSTKGMGKMAPSPAHFITLNGSTVPL 174

Query: 1211 ----------PSSGGLYFPEYVVYRGEQV 1229
                      P    L + E++VY   QV
Sbjct: 175  GPASDTGILNPEGYTLNYNEFIVYSPNQV 203

>d1gs0a2 d.166.1.2 (A:341-557) Poly(ADP-ribose) polymerase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 217

class: Alpha and beta proteins (a+b)
fold: ADP-ribosylation
superfamily: ADP-ribosylation
family: Poly(ADP-ribose) polymerase, C-terminal domain
domain: Poly(ADP-ribose) polymerase, C-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 5/54 (9%)

Query: 974  VHRRAEVADENGGQAHERMLFHGSPFIN--AIVQKGFDER---HAYIGGMFGAG 1022
            V +  E         +  +L+HGS   N   I+  G           G MFG G
Sbjct: 43   VEKEGEKEAFREDLPNRMLLWHGSRLSNWVGILSHGLRVAPPEAPITGYMFGKG 96

>d1b0xa_ a.60.1.2 (A:) EphA4 receptor tyrosine kinases {Mouse (Mus musculus) [TaxId: 10090]} Length = 72

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: EphA4 receptor tyrosine kinases
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.7 bits (108), Expect = 7e-07
 Identities = 10/50 (20%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 815 LGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           + +    + F     T L+ +  M+ +DL ++G++A  +++K+L  ++ +
Sbjct: 14  IKMDRYKDNFTAAGYTTLEAVVHMSQDDLARIGITAITHQNKILSSVQAM 63

>d1efya2 d.166.1.2 (A:797-1011) Poly(ADP-ribose) polymerase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 215

class: Alpha and beta proteins (a+b)
fold: ADP-ribosylation
superfamily: ADP-ribosylation
family: Poly(ADP-ribose) polymerase, C-terminal domain
domain: Poly(ADP-ribose) polymerase, C-terminal domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 48.9 bits (116), Expect = 8e-07
 Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 17/89 (19%)

Query: 882 DDKEFITVAEEMQATVREHRDNGQSGGIFSRYNIIRIQKVQNRKLWERYVHRRAEVADEN 941
           D +E   + + ++ T         +        ++ I +++     +RY           
Sbjct: 11  DSEEAKIIKQYVKNT-------HAATHNAYDLKVVEIFRIEREGESQRY--------KPF 55

Query: 942 GGQAHERMLFHGSPFIN--AIVQKGFDER 968
               + ++L+HGS   N   I+ +G    
Sbjct: 56  KQLHNRQLLWHGSRTTNFAGILSQGLRIA 84

>d1efya2 d.166.1.2 (A:797-1011) Poly(ADP-ribose) polymerase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 215

class: Alpha and beta proteins (a+b)
fold: ADP-ribosylation
superfamily: ADP-ribosylation
family: Poly(ADP-ribose) polymerase, C-terminal domain
domain: Poly(ADP-ribose) polymerase, C-terminal domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 42.4 bits (99), Expect = 1e-04
 Identities = 20/85 (23%), Positives = 27/85 (31%), Gaps = 27/85 (31%)

Query: 1172 AGEKRHLLMCRVTLGKSFLQFNAIKMAHAPPGHHSVMGRPSS------------------ 1213
            A     +L+  V LG  +   NA  +   P G HSV G   +                  
Sbjct: 117  ADPIGLILLGEVALGNMYELKNASHITKLPKGKHSVKGLGKTAPDPTATTTLDGVEVPLG 176

Query: 1214 ---------GGLYFPEYVVYRGEQV 1229
                       L + EY+VY   QV
Sbjct: 177  NGISTGINDTCLLYNEYIVYDVAQV 201

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (112), Expect = 9e-07
 Identities = 23/165 (13%), Positives = 49/165 (29%), Gaps = 14/165 (8%)

Query: 402 QLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADV 461
           +L  A+  GD+  V RLL       +  +  G+ +  +           +    A     
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64

Query: 462 HSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLV 521
            +   +              K   +  A + +       P+    +      ++ +    
Sbjct: 65  DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES 124

Query: 522 NPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKH 566
           +   ++ RD  G   TPL  A            G  ++ ++L  H
Sbjct: 125 D---LHRRDARGL--TPLELAL---------QRGAQDLVDILQGH 155

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (110), Expect = 2e-06
 Identities = 30/167 (17%), Positives = 43/167 (25%), Gaps = 20/167 (11%)

Query: 434 RHSTPLHFAAGYNRVAVVEYLL-AHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLP 492
           R    L  AA    V  V  LL        + +          +  +       L     
Sbjct: 1   RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGAS 60

Query: 493 LSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNAC 552
            +    +        A  G   T    + +   VN  D  G             P+H A 
Sbjct: 61  PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGAL-----------PIHLAV 109

Query: 553 SYGHYEVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQH 592
             GH  V   L    ++++  D    TPL  A           L  H
Sbjct: 110 QEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (104), Expect = 1e-05
 Identities = 11/47 (23%), Positives = 19/47 (40%)

Query: 1053 NMYYGTLTPHNVKHGANVNVADLWKFTPLHEAAAKGKADIVRLLLQH 1099
                 T     +   ++++  D    TPL  A  +G  D+V +L  H
Sbjct: 109  VQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 3e-05
 Identities = 25/182 (13%), Positives = 48/182 (26%), Gaps = 33/182 (18%)

Query: 547 PLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTA 606
            L  A + G  +    L                         L +     +  N  GKTA
Sbjct: 5   RLSGAAARGDVQEVRRL-------------------------LHRELVHPDALNRFGKTA 39

Query: 607 LDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPR 666
           L + +  + A+     K+                             +    +E      
Sbjct: 40  LQVMMFGSTAIALELLKQGASPNVQDTS----GTSPVHDAARTGFLDTLKVLVEHGADVN 95

Query: 667 IKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVES 726
           + D      +  A ++G  + V        ++ +    G TPL  A+       + +V+ 
Sbjct: 96  VPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDAR-GLTPLELALQR---GAQDLVDI 151

Query: 727 LI 728
           L 
Sbjct: 152 LQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (92), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 15  ASIHARDDGGLHPLHNACSFGHADVVRLLLE 45
           + +H RD  GL PL  A   G  D+V +L  
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (91), Expect = 4e-04
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 29/137 (21%)

Query: 504 ELFEACKGGDLTKVKKLV--NPQTVNARDTAGR---------------------KSTPLH 540
            L  A   GD+ +V++L+       +A +  G+                      S  + 
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64

Query: 541 FAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQ------HGA 594
             +G  P+H+A   G  +  ++LV+HGA+VNV D     P+H A  +            +
Sbjct: 65  DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES 124

Query: 595 DINLKNTDGKTALDLAV 611
           D++ ++  G T L+LA+
Sbjct: 125 DLHRRDARGLTPLELAL 141

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (91), Expect = 6e-04
 Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 4/145 (2%)

Query: 1   YGRKDVVEYLLAS-GASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFT 59
            G    V  LL        A +  G   L        A  + LL +  +      +    
Sbjct: 12  RGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDTSGTSP 71

Query: 60  PLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQ 119
               A       + + +      +  +              H     +LA  +D   ++ 
Sbjct: 72  VHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDA 131

Query: 120 EGQTPLDLTVA---EDVRSLLQDAM 141
            G TPL+L +    +D+  +LQ  M
Sbjct: 132 RGLTPLELALQRGAQDLVDILQGHM 156

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (89), Expect = 8e-04
 Identities = 23/156 (14%), Positives = 45/156 (28%), Gaps = 3/156 (1%)

Query: 302 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQ 361
           G  L  A  +GD   V++ L  ++V+              ++    +   E +       
Sbjct: 3   GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPN 62

Query: 362 ATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSS 421
                          T      +   +   +        +  +  +     T V   L++
Sbjct: 63  VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA 122

Query: 422 CPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAH 457
              + + RD  G   TPL  A       +V+ L  H
Sbjct: 123 ESDL-HRRDARGL--TPLELALQRGAQDLVDILQGH 155

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 0.001
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 1079 TPLHEAAAKGKADIVRLLL-QHGADPSKKNRDGATP 1113
              L  AAA+G    VR LL +    P   NR G T 
Sbjct: 4    DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA 39

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 0.001
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 2/101 (1%)

Query: 27  PLHNACSFGHADVVRLLLEAD-ANPNTRDNWNFTPLHEA-AAKGKTDVCIGIYFAEHSSK 84
            L  A + G    VR LL  +  +P+  + +  T L           + +    A  + +
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64

Query: 85  SNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPL 125
                  +               + HGAD  + +  G  P+
Sbjct: 65  DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPI 105

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 0.001
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLS 268
           G +P+H A   GH  V   L  A ++++  D    TPL  A  +   ++  +L  
Sbjct: 101 GALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1kw4a_ a.60.1.2 (A:) Polyhomeotic {Drosophila melanogaster [TaxId: 7227]} Length = 70

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Polyhomeotic
species: Drosophila melanogaster [TaxId: 7227]

 Score = 44.5 bits (105), Expect = 2e-06
 Identities = 8/48 (16%), Positives = 20/48 (41%)

Query: 816 GLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           G +  ++ F +++I    L  +  + L        G   K++  +E +
Sbjct: 22  GCQDYVDDFIQQEIDGQALLRLKEKHLVNAMGMKLGPALKIVAKVESI 69

>d1ow5a_ a.60.1.2 (A:) Serine/threonine-protein kinase ste11 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 60

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Serine/threonine-protein kinase ste11
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 815 LGLKHLLELF-EREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           +G    L+ F +   +T + +  ++ + L  +GV+  G R K+L+  +  
Sbjct: 10  IGCTQYLDSFIQCNLVTEEEIKYLDKDILIALGVNKIGDRLKILRKSKSF 59

>d1b4fa_ a.60.1.2 (A:) EphB2 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: EphB2 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 3e-06
 Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 815 LGLKHLLELFEREQI-TLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           + +    E F      + D++++M  ED+ +VGV+  G++ K+L  I+ +
Sbjct: 16  IKMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKILNSIQVM 65

>d1oxja1 a.60.1.2 (A:594-655) RNA-binding protein Smaug {Drosophila melanogaster [TaxId: 7227]} Length = 62

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: RNA-binding protein Smaug
species: Drosophila melanogaster [TaxId: 7227]

 Score = 40.3 bits (94), Expect = 5e-05
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 815 LGLKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL 863
           L L   +ELF+   +T + +  +  + L+ VGV+  G  HKL   I+KL
Sbjct: 15  LRLHKYIELFK--NMTYEEMLLITEDFLQSVGVTK-GASHKLALCIDKL 60

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (95), Expect = 8e-05
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 5/119 (4%)

Query: 27  PLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSN 86
            L  A + G  + VR LLEA ANPN  +++   P+            + +      + ++
Sbjct: 6   WLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCAD 65

Query: 87  QYVYGIGGGTGCPMHKDRSCYLAHGADPF--LKNQEGQTPLDLTVAE---DVRSLLQDA 140
                             +  + H A     +++  G+ P+DL       DV   L+ A
Sbjct: 66  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (89), Expect = 4e-04
 Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 10/128 (7%)

Query: 436 STPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSP 495
           +  L  AA   RV  V  LL  GA+ ++ ++   +     +  +A+              
Sbjct: 4   ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELL--------- 54

Query: 496 SAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYG 555
              +       +                               +  A G +P+  A   G
Sbjct: 55  -LLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG 113

Query: 556 HYEVTEML 563
           H +V   L
Sbjct: 114 HRDVARYL 121

>d1wwva1 a.60.1.2 (A:8-85) Connector enhancer of kinase suppressor of Ras 1, CNK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 78

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Connector enhancer of kinase suppressor of Ras 1, CNK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 11/49 (22%), Positives = 24/49 (48%)

Query: 817 LKHLLELFEREQITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCS 865
                  FE  Q+    L ++  + L+ + V + G++  +L G+E+L +
Sbjct: 21  DSLQDYPFEDWQLPGKNLLQLCPQSLEALAVRSLGHQELILGGVEQLQA 69

>d2d8ca1 a.60.1.2 (A:7-91) Sphingomyelin synthase 1, SMS1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 85

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Sphingomyelin synthase 1, SMS1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.7 bits (82), Expect = 0.003
 Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 4/55 (7%)

Query: 811 CSTNLGLKHLLELFEREQITLDILAEMNHEDLKQ--VGVSAYGYRHKLLKGIEKL 863
                 +    E  E    T   L  +  ED K+  +   +     +LL  IE L
Sbjct: 22  WLLENAMPEYCEPLE--HFTGQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIETL 74

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	1236
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.98
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.97
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.97
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.96
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.96
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.96
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.96
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.96
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.96
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.95
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.94
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.93
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.92
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.92
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.92
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.89
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.89
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.89
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.88
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.88
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.88
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.87
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.86
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.86
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.86
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.84
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.83
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.83
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.81
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.75
d1dxsa_	57	C-terminal domain of p73 {Human (Homo sapiens) [Ta	84.68
d1ow5a_	60	Serine/threonine-protein kinase ste11 {Baker's yea	83.45
d1v38a_	78	Sam-domain protein samsn-1 {Mouse (Mus musculus) [	82.65

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-46  Score=438.02  Aligned_cols=383  Identities=31%  Similarity=0.378  Sum_probs=278.0

Q ss_pred             cchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcch
Q psy8898          25 LHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDR  104 (1236)
Q Consensus        25 ~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v  104 (1236)
                      .||||+||..|+.++|++|+++|+++|..|..|+||||+|+..|+.++|++                             
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~-----------------------------   51 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKY-----------------------------   51 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHH-----------------------------
T ss_pred             CChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH-----------------------------
Confidence            499999999999999999999999999999999999999999999999988                             


Q ss_pred             hHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCCC
Q psy8898         105 SCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGG  184 (1236)
Q Consensus       105 ~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (1236)
                        |+++|++++.++.+|+|||++|+..|+.++++.++..........                                 
T Consensus        52 --Ll~~gadi~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~---------------------------------   96 (408)
T d1n11a_          52 --LLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLAT---------------------------------   96 (408)
T ss_dssp             --HHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC---------------------------------
T ss_pred             --HHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccc---------------------------------
Confidence              999999999999999999999999999999988887642111100                                 


Q ss_pred             CcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHH
Q psy8898         185 DSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCS  264 (1236)
Q Consensus       185 ~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~  264 (1236)
                                                 ....+++..+...+...........+...+..+..+.++|+.|+..++.++++
T Consensus        97 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~  149 (408)
T d1n11a_          97 ---------------------------TAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE  149 (408)
T ss_dssp             ---------------------------TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             ---------------------------ccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHH
Confidence                                       12445788888888888888888888888888888888888888888888888


Q ss_pred             HHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHH
Q psy8898         265 LLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLI  344 (1236)
Q Consensus       265 ~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~  344 (1236)
                      +|+++|++++..+.+|.+|                                                             
T Consensus       150 ~ll~~~~~~~~~~~~~~~~-------------------------------------------------------------  168 (408)
T d1n11a_         150 LLLERDAHPNAAGKNGLTP-------------------------------------------------------------  168 (408)
T ss_dssp             HHHHTTCCTTCCCSSCCCH-------------------------------------------------------------
T ss_pred             HHHHcCCCCCcCCCcCchH-------------------------------------------------------------
Confidence            8888888776555433332                                                             


Q ss_pred             HHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCC
Q psy8898         345 DLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPH  424 (1236)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~  424 (1236)
                                                                                |+.|+..|+.+++++|++. +.
T Consensus       169 ----------------------------------------------------------L~~A~~~~~~~~~~~Ll~~-g~  189 (408)
T d1n11a_         169 ----------------------------------------------------------LHVAVHHNNLDIVKLLLPR-GG  189 (408)
T ss_dssp             ----------------------------------------------------------HHHHHHTTCHHHHHHHGGG-TC
T ss_pred             ----------------------------------------------------------HHHHHHcCCHHHHHHHHhc-CC
Confidence                                                                      2333334444444444444 33


Q ss_pred             cccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhH
Q psy8898         425 IVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRE  504 (1236)
Q Consensus       425 ~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~  504 (1236)
                      +++..+..+  .||+|+++...+.++..+|+..+.....    .+..                                 
T Consensus       190 ~~~~~~~~~--~t~l~~~~~~~~~~~~~~l~~~~~~~~~----~~~~---------------------------------  230 (408)
T d1n11a_         190 SPHSPAWNG--YTPLHIAAKQNQVEVARSLLQYGGSANA----ESVQ---------------------------------  230 (408)
T ss_dssp             CSCCCCTTC--CCHHHHHHHTTCHHHHHHHHHTTCCTTC----CCTT---------------------------------
T ss_pred             cccccCCCC--CCcchhhhccchhhhhhhhhhccccccc----cCCC---------------------------------
Confidence            334333333  2555555555555555555554443321    1123                                 


Q ss_pred             HHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHH
Q psy8898         505 LFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEA  584 (1236)
Q Consensus       505 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a  584 (1236)
                                                             +.|||++|+..++.++++++++.+..++..+..|.|     
T Consensus       231 ---------------------------------------~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----  266 (408)
T d1n11a_         231 ---------------------------------------GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLT-----  266 (408)
T ss_dssp             ---------------------------------------CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCC-----
T ss_pred             ---------------------------------------CCCHHHHHHHhCcHhHhhhhhccccccccccCCCCC-----
Confidence                                                   344555555555555555555554444333322222     


Q ss_pred             HHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCccccccccccccc
Q psy8898         585 AAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFM  664 (1236)
Q Consensus       585 ~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  664 (1236)
                                                                                                      
T Consensus       267 --------------------------------------------------------------------------------  266 (408)
T d1n11a_         267 --------------------------------------------------------------------------------  266 (408)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchH
Q psy8898         665 PRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAP  744 (1236)
Q Consensus       665 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~  744 (1236)
                                ||+.|+..++.+++++|++++......+..+.||||.++..   ++.+++++++++|+++|.+|.+|+||
T Consensus       267 ----------~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~---~~~~~~~~ll~~g~~in~~d~~G~T~  333 (408)
T d1n11a_         267 ----------PLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHY---GNIKLVKFLLQHQADVNAKTKLGYSP  333 (408)
T ss_dssp             ----------HHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHS---SCSHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             ----------hhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhccc---CcceeeeeeccccccccccCCCCCCH
Confidence                      22223344455555555555444444444467777777776   67899999999999999999999999


Q ss_pred             HHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy8898         745 IHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLL  794 (1236)
Q Consensus       745 Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll  794 (1236)
                      ||+|++.|+.++|++|+++||++|.+|++|+||||+|+++|+.++|++|.
T Consensus       334 Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~  383 (408)
T d1n11a_         334 LHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLK  383 (408)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998664

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-44  Score=418.86  Aligned_cols=384  Identities=31%  Similarity=0.429  Sum_probs=296.6

Q ss_pred             CCcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898           1 YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      +|+.++|++|+++|+++|.+|..|+||||+||..|+.++|++|+++|+++|..|..|.||||+|+..|+.+++++     
T Consensus        10 ~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~~~~~-----   84 (408)
T d1n11a_          10 MGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKL-----   84 (408)
T ss_dssp             HTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHH-----
T ss_pred             CcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHH-----
Confidence            599999999999999999999999999999999999999999999999999999999999999999999999987     


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPS  160 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~  160 (1236)
                                                |+..+.+.........+++..+...+...............             
T Consensus        85 --------------------------Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  125 (408)
T d1n11a_          85 --------------------------LLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ-------------  125 (408)
T ss_dssp             --------------------------HHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-------------
T ss_pred             --------------------------HHHhhhccccccccccchhhhhhhhcccccccccccccccc-------------
Confidence                                      99999999888888899999998887776665544332110             


Q ss_pred             cccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCC
Q psy8898         161 QYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANV  240 (1236)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~  240 (1236)
                                                                     ......+.++|+.|+..++.+++++|+++|+++
T Consensus       126 -----------------------------------------------~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~  158 (408)
T d1n11a_         126 -----------------------------------------------ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP  158 (408)
T ss_dssp             -----------------------------------------------CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             -----------------------------------------------cccccccchHHHHHHHcCCHHHHHHHHHcCCCC
Confidence                                                           001114778999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHh
Q psy8898         241 NAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKF  320 (1236)
Q Consensus       241 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~l  320 (1236)
                      +..+.+|.+|||+|+..|+.+++++|+++|++++..+..|.||+                                    
T Consensus       159 ~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l------------------------------------  202 (408)
T d1n11a_         159 NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPL------------------------------------  202 (408)
T ss_dssp             TCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHH------------------------------------
T ss_pred             CcCCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcc------------------------------------
Confidence            99999999999999999999999999999999998887776663                                    


Q ss_pred             hhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchh
Q psy8898         321 LTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLE  400 (1236)
Q Consensus       321 l~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~  400 (1236)
                                                                                                      
T Consensus       203 --------------------------------------------------------------------------------  202 (408)
T d1n11a_         203 --------------------------------------------------------------------------------  202 (408)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHH
Q psy8898         401 SQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAA  480 (1236)
Q Consensus       401 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~  480 (1236)
                         +.++.....+....++.. .......+..+  .|||++|+..++.++++++++.+...+..+.    .         
T Consensus       203 ---~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~--~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~----~---------  263 (408)
T d1n11a_         203 ---HIAAKQNQVEVARSLLQY-GGSANAESVQG--VTPLHLAAQEGHAEMVALLLSKQANGNLGNK----S---------  263 (408)
T ss_dssp             ---HHHHHTTCHHHHHHHHHT-TCCTTCCCTTC--CCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT----T---------
T ss_pred             ---hhhhccchhhhhhhhhhc-cccccccCCCC--CCHHHHHHHhCcHhHhhhhhccccccccccC----C---------
Confidence               223334444555555544 22223333333  4888888888888888888888776643322    2         


Q ss_pred             hcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHH
Q psy8898         481 QKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVT  560 (1236)
Q Consensus       481 ~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv  560 (1236)
                                                                                     |.|||+.|+..++.+++
T Consensus       264 ---------------------------------------------------------------g~~~l~~a~~~~~~~i~  280 (408)
T d1n11a_         264 ---------------------------------------------------------------GLTPLHLVAQEGHVPVA  280 (408)
T ss_dssp             ---------------------------------------------------------------CCCHHHHHHHHTCHHHH
T ss_pred             ---------------------------------------------------------------CCChhhhhhhcCcHHHH
Confidence                                                                           44556666666777777


Q ss_pred             HHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCccc
Q psy8898         561 EMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHR  640 (1236)
Q Consensus       561 ~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  640 (1236)
                      ++|+++|++++..+..+.||||.+                                                        
T Consensus       281 ~~Ll~~g~~~~~~~~~~~t~L~~~--------------------------------------------------------  304 (408)
T d1n11a_         281 DVLIKHGVMVDATTRMGYTPLHVA--------------------------------------------------------  304 (408)
T ss_dssp             HHHHHHTCCTTCCCSSCCCHHHHH--------------------------------------------------------
T ss_pred             HHHHHCCCccccccccccccchhh--------------------------------------------------------
Confidence            777777766655544443333332                                                        


Q ss_pred             ccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCCh
Q psy8898         641 YTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKR  720 (1236)
Q Consensus       641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~  720 (1236)
                                                             +..++.++++++++.+......+..|+||||+|++.   |+
T Consensus       305 ---------------------------------------~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~---g~  342 (408)
T d1n11a_         305 ---------------------------------------SHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ---GH  342 (408)
T ss_dssp             ---------------------------------------HHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT---TC
T ss_pred             ---------------------------------------cccCcceeeeeeccccccccccCCCCCCHHHHHHHc---CC
Confidence                                                   334445555555555555555555577888888876   78


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHH---HCCCCccccC
Q psy8898         721 KAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLL---RLGAKVNLVD  771 (1236)
Q Consensus       721 ~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll---~~ga~~n~~d  771 (1236)
                      .++|++|+++|||+|.+|.+|+||||+|++.|+.++|++|.   +++++....|
T Consensus       343 ~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~~  396 (408)
T d1n11a_         343 TDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSD  396 (408)
T ss_dssp             HHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHCCCCSSCC---
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHHHhccccccccc
Confidence            99999999999999999999999999999999999998764   4455555444

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4.8e-31  Score=292.17  Aligned_cols=277  Identities=29%  Similarity=0.347  Sum_probs=212.3

Q ss_pred             CchHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhH
Q psy8898         214 GLVPLHNACSYGHFEVTEMLIKAGANVNAMD-LWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTREL  292 (1236)
Q Consensus       214 g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d-~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~  292 (1236)
                      +.|+||.|+++|+.++|++|+++|+++|.++ ..|+||||+|+..|+.+++++|++.|.+++..+..+.+|         
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~---------   75 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATP---------   75 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH---------
T ss_pred             CcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchh---------
Confidence            6799999999999999999999999999775 579999999999999999999999998887766554444         


Q ss_pred             HHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCC
Q psy8898         293 QQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQ  372 (1236)
Q Consensus       293 ~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (1236)
                                                                                                      
T Consensus        76 --------------------------------------------------------------------------------   75 (285)
T d1wdya_          76 --------------------------------------------------------------------------------   75 (285)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHH
Q psy8898         373 SGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVE  452 (1236)
Q Consensus       373 ~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~  452 (1236)
                                                    .+.++..+..+....+++.. ......+  ..+.+++++|+..++..+++
T Consensus        76 ------------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~l~~a~~~~~~~~~~  122 (285)
T d1wdya_          76 ------------------------------FLLAAIAGSVKLLKLFLSKG-ADVNECD--FYGFTAFMEAAVYGKVKALK  122 (285)
T ss_dssp             ------------------------------HHHHHHHTCHHHHHHHHHTT-CCTTCBC--TTCCBHHHHHHHTTCHHHHH
T ss_pred             ------------------------------hHHHhhcCCccccchhhhhc-ccccccc--cCCCchhHHHHHhcchhhhh
Confidence                                          22333444555555555542 2222222  23459999999999999999


Q ss_pred             HHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCccccccc
Q psy8898         453 YLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTA  532 (1236)
Q Consensus       453 ~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  532 (1236)
                      .++....+++.....      ......                                                 ..  
T Consensus       123 ~~~~~~~~~~~~~~~------~~~~~~-------------------------------------------------~~--  145 (285)
T d1wdya_         123 FLYKRGANVNLRRKT------KEDQER-------------------------------------------------LR--  145 (285)
T ss_dssp             HHHHTTCCTTCCCCC------CHHHHH-------------------------------------------------TT--
T ss_pred             hhhhhcccccccccc------hhhhhh-------------------------------------------------hc--
Confidence            999988776433220      000000                                                 00  


Q ss_pred             CCCCchhhhhccchhHHHHHhcCcHHHHHHHHhC-CCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhc
Q psy8898         533 GRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKH-GANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAV  611 (1236)
Q Consensus       533 ~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~  611 (1236)
                               ..|.||||+|+.+|+.+++++|+++ |++++..+..|.++                          +..+.
T Consensus       146 ---------~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~--------------------------~~~~~  190 (285)
T d1wdya_         146 ---------KGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA--------------------------LIHAL  190 (285)
T ss_dssp             ---------CCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCH--------------------------HHHHH
T ss_pred             ---------ccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCcc--------------------------ccccc
Confidence                     0278999999999999999999975 66665555444333                          33221


Q ss_pred             ccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHh
Q psy8898         612 PCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKF  691 (1236)
Q Consensus       612 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~L  691 (1236)
                                                                                                      
T Consensus       191 --------------------------------------------------------------------------------  190 (285)
T d1wdya_         191 --------------------------------------------------------------------------------  190 (285)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHC-CCCcccc
Q psy8898         692 LTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRL-GAKVNLV  770 (1236)
Q Consensus       692 l~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~-ga~~n~~  770 (1236)
                                         .++.  ..+..+++++|+++|++++.+|..|.||||+|++.|+.++|++|+++ |+++|.+
T Consensus       191 -------------------~~~~--~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~  249 (285)
T d1wdya_         191 -------------------LSSD--DSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT  249 (285)
T ss_dssp             -------------------HCSC--TTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCC
T ss_pred             -------------------cccc--chHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCC
Confidence                               0000  12567899999999999999999999999999999999999999984 9999999


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccc
Q psy8898         771 DVLGQTALHRTARDDKTQAVRVLLSHNADTSIVSL  805 (1236)
Q Consensus       771 d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~  805 (1236)
                      |.+|+||||+|+++|+.++|++||++||+++.++.
T Consensus       250 d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         250 DSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence            99999999999999999999999999999998763

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-30  Score=276.46  Aligned_cols=218  Identities=24%  Similarity=0.311  Sum_probs=176.0

Q ss_pred             hHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHH
Q psy8898         401 SQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAA  480 (1236)
Q Consensus       401 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~  480 (1236)
                      +.++.++..|+++.|+.+++..+..++..|.+|+  ||||+|+..|+.+++++|++.+.+......    .         
T Consensus         5 ~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~--TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~----~---------   69 (223)
T d1uoha_           5 LMVCNLAYSGKLEELKESILADKSLATRTDQDSR--TALHWACSAGHTEIVEFLLQLGVPVNDKDD----A---------   69 (223)
T ss_dssp             SHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSC--CHHHHHHHHTCHHHHHHHHHHTCCSCCCCT----T---------
T ss_pred             HHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCC--CHHHHHHHhhhhcccccccccccccccccc----c---------
Confidence            4677888889999888888887778887777664  999999999999999998888776633322    2         


Q ss_pred             hcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHH
Q psy8898         481 QKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVT  560 (1236)
Q Consensus       481 ~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv  560 (1236)
                                                                                     +.++++.++..++.+++
T Consensus        70 ---------------------------------------------------------------~~~~~~~~~~~~~~~i~   86 (223)
T d1uoha_          70 ---------------------------------------------------------------GWSPLHIAASAGRDEIV   86 (223)
T ss_dssp             ---------------------------------------------------------------CCCHHHHHHHHTCHHHH
T ss_pred             ---------------------------------------------------------------ccccccccccccccchh
Confidence                                                                           44567777777888888


Q ss_pred             HHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCccc
Q psy8898         561 EMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHR  640 (1236)
Q Consensus       561 ~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  640 (1236)
                      ++|+++|++++..|..|.||||+                                                         
T Consensus        87 ~~Ll~~~~d~~~~d~~g~tpL~~---------------------------------------------------------  109 (223)
T d1uoha_          87 KALLGKGAQVNAVNQNGCTPLHY---------------------------------------------------------  109 (223)
T ss_dssp             HHHHHTTCCTTCCCTTCCCHHHH---------------------------------------------------------
T ss_pred             HHHhccCceeEeeCCCCCchhhH---------------------------------------------------------
Confidence            88888777665555444433333                                                         


Q ss_pred             ccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCCh
Q psy8898         641 YTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKR  720 (1236)
Q Consensus       641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~  720 (1236)
                                                            |+..|+.+++++|++.+.+....+..|.||||+|+..   ++
T Consensus       110 --------------------------------------A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~---~~  148 (223)
T d1uoha_         110 --------------------------------------AASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAK---GN  148 (223)
T ss_dssp             --------------------------------------HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT---TC
T ss_pred             --------------------------------------HHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhc---CC
Confidence                                                  3455667777777777666555666688888888886   78


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8898         721 KAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLS  795 (1236)
Q Consensus       721 ~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~  795 (1236)
                      .+++++|++.|++++.+|..|+||||+|++.|+.++|++|+++|++++.+|.+|+||||+| ..|+.+++++||+
T Consensus       149 ~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         149 LKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             cchhhhhccccceeeeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence            9999999999999999999999999999999999999999999999999999999999998 5799999999986

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=4.6e-31  Score=286.88  Aligned_cols=240  Identities=24%  Similarity=0.246  Sum_probs=182.5

Q ss_pred             cccCCCCcchhhHHhhcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCC
Q psy8898          18 HARDDGGLHPLHNACSFGHADVVRLLLEADAN---PNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGG   94 (1236)
Q Consensus        18 n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~---~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~   94 (1236)
                      +-.|++|+||||+||++|+.++|++|+++|++   ++..|..|+||||+|+..|+.+++++                   
T Consensus         3 ~~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~-------------------   63 (255)
T d1oy3d_           3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK-------------------   63 (255)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHH-------------------
T ss_pred             ccCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccc-------------------
Confidence            34578999999999999999999999999988   67888999999999999999999988                   


Q ss_pred             CCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCC
Q psy8898          95 GTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLP  174 (1236)
Q Consensus        95 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (1236)
                                  |+++|++++.+|.+|.||||+|+..++.++++.+++.............. ....    .+.      
T Consensus        64 ------------Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~~~~----~~~------  120 (255)
T d1oy3d_          64 ------------LYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYL-TQSQ----DCT------  120 (255)
T ss_dssp             ------------HHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------
T ss_pred             ------------cccccccccccccccchhhhhhhccCchHHHHHHHhhccchhcccchhhh-hHHh----hhc------
Confidence                        99999999999999999999999999999999998764322211111000 0000    000      


Q ss_pred             CCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc----CCchHHHHHHhcCcHHHHHHHHhcCCCCCCC-CCCCCc
Q psy8898         175 PPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA----LGLVPLHNACSYGHFEVTEMLIKAGANVNAM-DLWQFT  249 (1236)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~----~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~-d~~g~T  249 (1236)
                            ...........................+.+++    .|.||||+||..|+.++|++|++.+++.+.. +..|.|
T Consensus       121 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~T  194 (255)
T d1oy3d_         121 ------PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRT  194 (255)
T ss_dssp             -----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCC
T ss_pred             ------ccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccccccc
Confidence                  00000000000000111112333344444444    8999999999999999999999999998864 678999


Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccc
Q psy8898         250 PLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVV  326 (1236)
Q Consensus       250 pL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~  326 (1236)
                      |||+|+..|+.++|++|+++|++++.+|.+|+||                     |+.|+..++.+++++|++.+..
T Consensus       195 pL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~---------------------L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         195 PLHLAVEAQAASVLELLLKAGADPTARMYGGRTP---------------------LGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH---------------------HHHHHTSSCHHHHHHHHHTTCC
T ss_pred             cccccccccHHHHHHHHHHCCCCCCCCCCCCCCH---------------------HHHHHHCCCHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999998                     6778999999999999998764

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.9e-31  Score=277.20  Aligned_cols=209  Identities=26%  Similarity=0.380  Sum_probs=188.2

Q ss_pred             CCcHHHHHHHHH-cCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeecc
Q psy8898           1 YGRKDVVEYLLA-SGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFA   79 (1236)
Q Consensus         1 ~G~~~~v~~Ll~-~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~   79 (1236)
                      .|+++.|+.+++ .+.+++.+|.+|+||||+||..|+.+++++|++.+.+....+..+.++++.|+..|+.+++++    
T Consensus        13 ~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----   88 (223)
T d1uoha_          13 SGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKA----   88 (223)
T ss_dssp             TTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTCHHHHHH----
T ss_pred             hCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccccccccccccccccccccccccccchhHH----
Confidence            489999977765 578999999999999999999999999999999999999999999999999999999999988    


Q ss_pred             ccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy8898          80 EHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPP  159 (1236)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~  159 (1236)
                                                 |+++|++++..|..|.||||+|+..|+.++++.|++......           
T Consensus        89 ---------------------------Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~-----------  130 (223)
T d1uoha_          89 ---------------------------LLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD-----------  130 (223)
T ss_dssp             ---------------------------HHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-----------
T ss_pred             ---------------------------HhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCC-----------
Confidence                                       999999999999999999999999999999999886531100           


Q ss_pred             CcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCC
Q psy8898         160 SQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGAN  239 (1236)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~  239 (1236)
                                                                       .....|.||||+|+..|+.+++++|++.|++
T Consensus       131 -------------------------------------------------~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~  161 (223)
T d1uoha_         131 -------------------------------------------------AKDHYEATAMHRAAAKGNLKMIHILLYYKAS  161 (223)
T ss_dssp             -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             -------------------------------------------------CcCCCCCccchhhhhcCCcchhhhhccccce
Confidence                                                             0011488999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHH
Q psy8898         240 VNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKK  319 (1236)
Q Consensus       240 ~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~  319 (1236)
                      ++.+|.+|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|                      ..|+.+++++
T Consensus       162 i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A----------------------~~~~~~i~~~  219 (223)
T d1uoha_         162 TNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA----------------------KGGLGLILKR  219 (223)
T ss_dssp             SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC----------------------CTTHHHHHHH
T ss_pred             eeeccCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH----------------------HCCCHHHHhc
Confidence            999999999999999999999999999999999999999999996654                      4678888888


Q ss_pred             hhh
Q psy8898         320 FLT  322 (1236)
Q Consensus       320 ll~  322 (1236)
                      |++
T Consensus       220 Ll~  222 (223)
T d1uoha_         220 MVE  222 (223)
T ss_dssp             HHC
T ss_pred             ccC
Confidence            874

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=3.6e-30  Score=279.72  Aligned_cols=100  Identities=32%  Similarity=0.361  Sum_probs=91.9

Q ss_pred             cccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCC-CCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCC
Q psy8898         697 VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEK-NKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQ  775 (1236)
Q Consensus       697 ~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~-d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~  775 (1236)
                      .....+..|+||||+|+..   ++.+++++|++++++.+.. +..|.||||+|++.|+.++|++|+++|+++|.+|..|+
T Consensus       150 ~in~~d~~g~TpLh~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~  226 (255)
T d1oy3d_         150 QLEAENYDGHTPLHVAVIH---KDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGR  226 (255)
T ss_dssp             GTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             ccccccccCcccccccccc---cccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCC
Confidence            3444566799999999997   7899999999999998864 67899999999999999999999999999999999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCC
Q psy8898         776 TALHRTARDDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       776 tpL~~A~~~~~~~iv~~Ll~~ga~  799 (1236)
                      ||||+|+.+++.+++++|+++||+
T Consensus       227 t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         227 TPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             CHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             CHHHHHHHCCCHHHHHHHHHcCCC
Confidence            999999999999999999999996

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.9e-29  Score=279.19  Aligned_cols=263  Identities=28%  Similarity=0.331  Sum_probs=216.9

Q ss_pred             CCcHHHHHHHHHcCCCccccCC-CCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeecc
Q psy8898           1 YGRKDVVEYLLASGASIHARDD-GGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFA   79 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~ga~~n~~d~-~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~   79 (1236)
                      +|++++|++|+++|+++|.++. .|+||||+|+..|+.+++++|++.|.+++..+..+.+|.++|+..+..+....    
T Consensus        15 ~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   90 (285)
T d1wdya_          15 NEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKL----   90 (285)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHH----
T ss_pred             cCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCCccccch----
Confidence            5899999999999999997764 79999999999999999999999999999999999999999999998888776    


Q ss_pred             ccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCC
Q psy8898          80 EHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPP  159 (1236)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~  159 (1236)
                                                 ++++..+....+..+.+++++|+..++..++..++...........       
T Consensus        91 ---------------------------~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~-------  136 (285)
T d1wdya_          91 ---------------------------FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK-------  136 (285)
T ss_dssp             ---------------------------HHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCC-------
T ss_pred             ---------------------------hhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhccccccccc-------
Confidence                                       8888888888888999999999999999998888865321110000       


Q ss_pred             CcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhc-CC
Q psy8898         160 SQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKA-GA  238 (1236)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~-ga  238 (1236)
                                                        ...         ........|.||||+||.+|+.+++++|++. |+
T Consensus       137 ----------------------------------~~~---------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~  173 (285)
T d1wdya_         137 ----------------------------------TKE---------DQERLRKGGATALMDAAEKGHVEVLKILLDEMGA  173 (285)
T ss_dssp             ----------------------------------CCH---------HHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCC
T ss_pred             ----------------------------------chh---------hhhhhcccCchHHHHHHHcCCHHHHHHHHhccCC
Confidence                                              000         0001122589999999999999999999965 89


Q ss_pred             CCCCCCCCCCcHHHHHHHc----CcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCCh
Q psy8898         239 NVNAMDLWQFTPLHEAASK----SRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDP  314 (1236)
Q Consensus       239 ~~n~~d~~g~TpL~~A~~~----g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~  314 (1236)
                      +++..+..|.++++.+...    +..+++++|+++|++++.++..|.||                               
T Consensus       174 ~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~-------------------------------  222 (285)
T d1wdya_         174 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP-------------------------------  222 (285)
T ss_dssp             CTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCH-------------------------------
T ss_pred             CcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCc-------------------------------
Confidence            9999999999998887654    34579999999999998877666655                               


Q ss_pred             HHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCC
Q psy8898         315 SRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPP  394 (1236)
Q Consensus       315 ~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~  394 (1236)
                                                                                                      
T Consensus       223 --------------------------------------------------------------------------------  222 (285)
T d1wdya_         223 --------------------------------------------------------------------------------  222 (285)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CcCchhhHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCC
Q psy8898         395 SVVDLESQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKD  465 (1236)
Q Consensus       395 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~  465 (1236)
                              ||.|++.|+.++|++|++..+.+++..+.+|  .||||+|++.|+.++|++|+++|||+|.++
T Consensus       223 --------L~~a~~~~~~~~v~~lL~~~g~din~~d~~G--~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         223 --------LILAVEKKHLGLVQRLLEQEHIEINDTDSDG--KTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             --------HHHHHHTTCHHHHHHHHHSSSCCTTCCCTTS--CCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             --------cchhhhcCcHHHHHHHHHcCCCCCcCCCCCC--CCHHHHHHHcCCHHHHHHHHHCCCCCCccc
Confidence                    5566777888899999987788888887766  499999999999999999999999997765

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=6.4e-29  Score=264.83  Aligned_cols=225  Identities=25%  Similarity=0.319  Sum_probs=169.4

Q ss_pred             hHHHHHHhCCCHHHHHHHHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHH
Q psy8898         401 SQLLEASKGGDMTVVTRLLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAA  480 (1236)
Q Consensus       401 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~  480 (1236)
                      +|||.||..|+.+.|+.|++..+..++.++.+|  +||||+|+..|+.++|++|+++|++++..+. .+..         
T Consensus         2 ~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G--~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~~~---------   69 (229)
T d1ixva_           2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDG--RIPLHWSVSFQAHEITSFLLSKMENVNLDDY-PDDS---------   69 (229)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTS--CCHHHHHHHTTCHHHHHHHHTTCTTCCGGGC-CCTT---------
T ss_pred             HhHHHHHHcCCHHHHHHHHHcCCCcccccCCCC--CCHHHHHHHcCCccccchhhhhhcccccccc-cccc---------
Confidence            578888888888888888887777777777665  4888888888888888888888888754421 2333         


Q ss_pred             hcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHH
Q psy8898         481 QKGRTQLSALLPLSPSAANDPLRELFEACKGGDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVT  560 (1236)
Q Consensus       481 ~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv  560 (1236)
                                                                                     |.+|+++++..+..+++
T Consensus        70 ---------------------------------------------------------------~~~~~~~~~~~~~~~~~   86 (229)
T d1ixva_          70 ---------------------------------------------------------------GWTPFHIACSVGNLEVV   86 (229)
T ss_dssp             ---------------------------------------------------------------SCCHHHHHHHHTCHHHH
T ss_pred             ---------------------------------------------------------------ccccccccccccccccc
Confidence                                                                           44455555555555666


Q ss_pred             HHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCccc
Q psy8898         561 EMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHR  640 (1236)
Q Consensus       561 ~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  640 (1236)
                      +.++..+...+..                        ..+.                                       
T Consensus        87 ~~~~~~~~~~~~~------------------------~~~~---------------------------------------  103 (229)
T d1ixva_          87 KSLYDRPLKPDLN------------------------KITN---------------------------------------  103 (229)
T ss_dssp             HHHHSSSSCCCTT------------------------CCCT---------------------------------------
T ss_pred             ccccccccccccc------------------------cccc---------------------------------------
Confidence            6555554432211                        1111                                       


Q ss_pred             ccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCCh
Q psy8898         641 YTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKR  720 (1236)
Q Consensus       641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~  720 (1236)
                                                    .+.++++.++..++.+++++|+..+......+..|+||||+|+..   ++
T Consensus       104 ------------------------------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~---~~  150 (229)
T d1ixva_         104 ------------------------------QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASV---GS  150 (229)
T ss_dssp             ------------------------------TSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH---TC
T ss_pred             ------------------------------ccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhc---cc
Confidence                                          123344444556666666666666665555666688999999986   78


Q ss_pred             HHHHHHHHHcC-CCCCCCCCCCchHHHHHHHhCCHHHHHHHHH-CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8898         721 KAIVESLIRKG-AHLNEKNKELLAPIHLAADLGHLDVLDTLLR-LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNA  798 (1236)
Q Consensus       721 ~~iv~~Ll~~g-adin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~-~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga  798 (1236)
                      .+++++|++.| .++|.+|..|+||||+|++.|+.++|++|++ .|++++.+|.+|+||||+|+.   .+++++|+++|+
T Consensus       151 ~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~  227 (229)
T d1ixva_         151 LKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVV  227 (229)
T ss_dssp             HHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCC
T ss_pred             ccccccccccccccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcCC
Confidence            99999999986 7889999999999999999999999999997 599999999999999999984   589999999998


Q ss_pred             C
Q psy8898         799 D  799 (1236)
Q Consensus       799 ~  799 (1236)
                      |
T Consensus       228 d  228 (229)
T d1ixva_         228 D  228 (229)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.96  E-value=5.2e-29  Score=276.42  Aligned_cols=221  Identities=32%  Similarity=0.385  Sum_probs=187.1

Q ss_pred             CCcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898           1 YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      +|++++|++||++|+|+|.+|.+|+||||+|+.+|+.++|++|+++|++++..+..+.|||++|+..|+.++++.     
T Consensus        50 ~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~~~~~-----  124 (291)
T d1s70b_          50 SGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEY-----  124 (291)
T ss_dssp             HTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH-----
T ss_pred             cCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccccccchhhc-----
Confidence            489999999999999999999999999999999999999999999999999999999999999999999999987     


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPS  160 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~  160 (1236)
                                                |+++|+..+..+..|.+|+++|+..+..+.++.++............       
T Consensus       125 --------------------------l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~-------  171 (291)
T d1s70b_         125 --------------------------LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARK-------  171 (291)
T ss_dssp             --------------------------HHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHH-------
T ss_pred             --------------------------ccccCcccccccccCccccccccccccchhccccccccccccccccc-------
Confidence                                      99999999999999999999999999999999888642110000000       


Q ss_pred             cccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcC----CccccCCchHHHHHHhcCcHHHHHHHHhc
Q psy8898         161 QYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPS----GQAVALGLVPLHNACSYGHFEVTEMLIKA  236 (1236)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~----g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~  236 (1236)
                                                    ....+........+...    ......|.||||+|+..|+.+++++|++.
T Consensus       172 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~  221 (291)
T d1s70b_         172 ------------------------------EEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA  221 (291)
T ss_dssp             ------------------------------HHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred             ------------------------------cccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccc
Confidence                                          00001111112222222    22223799999999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q psy8898         237 GANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPT  289 (1236)
Q Consensus       237 ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~  289 (1236)
                      |+++|.++.+|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|..
T Consensus       222 g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e  274 (291)
T d1s70b_         222 RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE  274 (291)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999853

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=3.6e-29  Score=275.63  Aligned_cols=217  Identities=25%  Similarity=0.279  Sum_probs=175.3

Q ss_pred             cchhHHHHHhcCcHHHHHHH--------HhCCCCCccCCCCCCCHHHHHH-------HHHHHhcCCCCcccCCCCCChhh
Q psy8898         544 GLVPLHNACSYGHYEVTEML--------VKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALD  608 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~L--------l~~g~~v~~~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~~~~g~t~L~  608 (1236)
                      |+||||+||..|+.++|++|        ++.|++||.+|.+|+||||+|+       +++|+++|++++.+|.+|+||++
T Consensus        33 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~  112 (277)
T d2fo1e1          33 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALH  112 (277)
T ss_dssp             CCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHH
T ss_pred             CccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeecccccccccccccccccccccccccccccccccc
Confidence            88999999999999988776        5679999999999999999997       67999999999999999999999


Q ss_pred             hhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHH--
Q psy8898         609 LAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPS--  686 (1236)
Q Consensus       609 ~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~--  686 (1236)
                      +|+      ..++..+...+....                           ......+..+..+.++.+.+...+..+  
T Consensus       113 ~a~------~~~~~~~~~~l~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (277)
T d2fo1e1         113 QAA------ANRDFGMMVYMLNST---------------------------KLKGDIEELDRNGMTALMIVAHNEGRDQV  159 (277)
T ss_dssp             HHH------HTTCHHHHHHHTTSH---------------------------HHHHTTSCCCTTSCCHHHHHHHSCSTTHH
T ss_pred             chh------hhcchhhhhhhhhcc---------------------------cccccccccccccchhHHHHHhccccccc
Confidence            996      555555555543211                           011223344566677888888777544  


Q ss_pred             -HHHHhhccCC--------cccCCCCCCChHHHHHhhCCCCChHHHHHHHH-HcCCCCCCCCCCCchHHHHHHHhCCHHH
Q psy8898         687 -RVKKFLTSDV--------VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLI-RKGAHLNEKNKELLAPIHLAADLGHLDV  756 (1236)
Q Consensus       687 -~v~~Ll~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll-~~gadin~~d~~G~T~Lh~A~~~g~~~i  756 (1236)
                       .+..+.....        .....+..|+||||+++..   ++.+++++++ ..+.+++.+|..|+||||+|++.|+.++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~---~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~i  236 (277)
T d2fo1e1         160 ASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQV---SNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEV  236 (277)
T ss_dssp             HHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSS---CCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred             ccccccccccccccccccccccccccCCCCcccccccc---ccccccccccccccccccccCCCCCCHHHHHHHcCCHHH
Confidence             3333333221        1222344599999999987   7888988755 5689999999999999999999999999


Q ss_pred             HHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8898         757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSH  796 (1236)
Q Consensus       757 v~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~  796 (1236)
                      |++|+++|+|+|.+|.+|+||||+|+++|+.++|++|++.
T Consensus       237 v~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~c  276 (277)
T d2fo1e1         237 VMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC  276 (277)
T ss_dssp             HHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred             HHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            9999999999999999999999999999999999999864

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.96  E-value=5e-29  Score=276.59  Aligned_cols=236  Identities=24%  Similarity=0.321  Sum_probs=175.0

Q ss_pred             chHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCCCCCCCCCchhHHHHHHhcCChH
Q psy8898         436 STPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPLSPSAANDPLRELFEACKGGDLT  515 (1236)
Q Consensus       436 ~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~L~~A~~~g~~~  515 (1236)
                      .|||+.|+..|+.++|++|+++|++++    ..|.+|+||||+|+..|+.+++++|++.+.....               
T Consensus        41 ~t~l~~A~~~G~~~~v~~Ll~~Gadvn----~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~---------------  101 (291)
T d1s70b_          41 GAVFLAACSSGDTEEVLRLLERGADIN----YANVDGLTALHQACIDDNVDMVKFLVENGANINQ---------------  101 (291)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHCCCTT----CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC---------------
T ss_pred             chHHHHHHHcCCHHHHHHHHHCCCCCC----ccCCCCCcHHHHHHhcCCceeeeeeccccccccc---------------
Confidence            489999999999999999999999995    4555899999999988888888877654432211               


Q ss_pred             HHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHH-------HH
Q psy8898         516 KVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAA-------KA  588 (1236)
Q Consensus       516 ~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~-------~~  588 (1236)
                                   ...           .+.|||++|+..++.++++.|+++|+..+..|..+.+|+++|+.       +.
T Consensus       102 -------------~~~-----------~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  157 (291)
T d1s70b_         102 -------------PDN-----------EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQN  157 (291)
T ss_dssp             -------------CCT-----------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHH
T ss_pred             -------------ccc-----------cccccccccccccccchhhcccccCcccccccccCccccccccccccchhccc
Confidence                         000           26678888999999999999998888888888788777777642       12


Q ss_pred             HH-hcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccc
Q psy8898         589 LL-QHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRI  667 (1236)
Q Consensus       589 Ll-~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  667 (1236)
                      ++ ..+.++......+..                                                              
T Consensus       158 ll~~~~~~~~~~~~~~~~--------------------------------------------------------------  175 (291)
T d1s70b_         158 EVNRQGVDIEAARKEEER--------------------------------------------------------------  175 (291)
T ss_dssp             HHHHHTCCHHHHHHHHHH--------------------------------------------------------------
T ss_pred             cccccccccccccccccc--------------------------------------------------------------
Confidence            22 222221111000000                                                              


Q ss_pred             hhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHH
Q psy8898         668 KDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHL  747 (1236)
Q Consensus       668 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~  747 (1236)
                             +       ........+..........+..|.||||+|+..   ++.+++++|+++|+|+|.+|..|+||||+
T Consensus       176 -------~-------~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~---~~~~~~~~Ll~~g~din~~~~~g~TpL~~  238 (291)
T d1s70b_         176 -------I-------MLRDARQWLNSGHINDVRHAKSGGTALHVAAAK---GYTEVLKLLIQARYDVNIKDYDGWTPLHA  238 (291)
T ss_dssp             -------H-------HHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH---TCHHHHHHHHTTTCCTTCCCTTCCCHHHH
T ss_pred             -------c-------ccccchhhhcccccccccccCCCCChhhHHHHc---CChhhhcccccceecccccccCCCCHHHH
Confidence                   0       001122222233333444555699999999997   78999999999999999999999999999


Q ss_pred             HHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8898         748 AADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHN  797 (1236)
Q Consensus       748 A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~g  797 (1236)
                      |++.|+.++|++|+++|||+|.+|+.|+||||+|++    +++++|.+.+
T Consensus       239 A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e----~~~~~L~~~~  284 (291)
T d1s70b_         239 AAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE----DILGYLEELQ  284 (291)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS----GGGHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH----HHHHHHHHHh
Confidence            999999999999999999999999999999999976    5777776644

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=8e-29  Score=272.81  Aligned_cols=268  Identities=20%  Similarity=0.205  Sum_probs=198.0

Q ss_pred             cchhhHHhh-cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcc
Q psy8898          25 LHPLHNACS-FGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKD  103 (1236)
Q Consensus        25 ~t~L~~A~~-~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (1236)
                      .||||+|+. .|+.++++.|.+.++++... +.|+||||+|+..|+.++|+.|+...                       
T Consensus         1 ~~p~~~~~~~~~~~~~~~~l~~~~~n~~~~-~~g~T~Lh~A~~~g~~~~v~~Ll~~~-----------------------   56 (277)
T d2fo1e1           1 ESPIKLHTEAAGSYAITEPITRESVNIIDP-RHNRTVLHWIASNSSAEKSEDLIVHE-----------------------   56 (277)
T ss_dssp             CCCCHHHHHHHSSSCCCSCCSTTTTTTCCC-SSCCCHHHHHHCTTCCSCCTTHHHHH-----------------------
T ss_pred             CChHHHHHHhCCCHHHHHHHHhcCCCcCCC-CCCccHHHHHHHcCCHHHHHHHHhcc-----------------------
Confidence            489996665 57788888888887654332 35999999999999999999864332                       


Q ss_pred             hhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCC
Q psy8898         104 RSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSG  183 (1236)
Q Consensus       104 v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (1236)
                      ++.++++|||++.+|.+                                                               
T Consensus        57 ~~~~l~~Gadvn~~d~~---------------------------------------------------------------   73 (277)
T d2fo1e1          57 AKECIAAGADVNAMDCD---------------------------------------------------------------   73 (277)
T ss_dssp             HHHHHHTCCCTTCCCTT---------------------------------------------------------------
T ss_pred             hhHHHHcCCCccccCCC---------------------------------------------------------------
Confidence            23478889999877665                                                               


Q ss_pred             CCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q psy8898         184 GDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVC  263 (1236)
Q Consensus       184 ~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv  263 (1236)
                                                    |+||||+||..|+.++|++|+++|++++.+|.+|.|||++|+..++.+++
T Consensus        74 ------------------------------G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~  123 (277)
T d2fo1e1          74 ------------------------------ENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMM  123 (277)
T ss_dssp             ------------------------------SCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHH
T ss_pred             ------------------------------CCeeeccccccccccccccccccccccccccccccccccchhhhcchhhh
Confidence                                          55677778888999999999999999999999999999999999999999


Q ss_pred             HHHHhCC---CCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHH---hhhcccccCCCCCCCCCC
Q psy8898         264 SLLLSEG---ADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKK---FLTSDVVNFKHPYTGDTP  337 (1236)
Q Consensus       264 ~~Ll~~g---a~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~---ll~~~~~~~~~~~~~~t~  337 (1236)
                      +++...+   ..++..+..+.++.                     ..+...+..+.+..   +.........        
T Consensus       124 ~~l~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  174 (277)
T d2fo1e1         124 VYMLNSTKLKGDIEELDRNGMTAL---------------------MIVAHNEGRDQVASAKLLVEKGAKVDY--------  174 (277)
T ss_dssp             HHHTTSHHHHHTTSCCCTTSCCHH---------------------HHHHHSCSTTHHHHHHHHHHHTCCSSC--------
T ss_pred             hhhhhcccccccccccccccchhH---------------------HHHHhcccccccccccccccccccccc--------
Confidence            9988764   34555555555553                     33333333222211   1111000000        


Q ss_pred             CchhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHH
Q psy8898         338 LPGTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTR  417 (1236)
Q Consensus       338 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~  417 (1236)
                                                                       ............+.++|+.++..++.+++++
T Consensus       175 -------------------------------------------------~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~  205 (277)
T d2fo1e1         175 -------------------------------------------------DGAARKDSEKYKGRTALHYAAQVSNMPIVKY  205 (277)
T ss_dssp             -------------------------------------------------CSGGGTSSSSCCCCCTHHHHHSSCCHHHHHH
T ss_pred             -------------------------------------------------cccccccccccCCCCcccccccccccccccc
Confidence                                                             0000112223456677888999999999999


Q ss_pred             HHhhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCCccCCCChHHHHHhcCchHHHhhcCC
Q psy8898         418 LLSSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGADVHSKDNATDKWGFTPLHEAAQKGRTQLSALLPL  493 (1236)
Q Consensus       418 Ll~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~d~~g~t~L~~A~~~~~~~iv~~L~~  493 (1236)
                      ++...+.+.+..+..+  +||||+|+..|+.++|++|+++|++++    .+|.+|+||||+|+++|+.+++++|.+
T Consensus       206 ~l~~~~~~~~~~d~~g--~tpL~~A~~~g~~~iv~~Ll~~gadin----~~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         206 LVGEKGSNKDKQDEDG--KTPIMLAAQEGRIEVVMYLIQQGASVE----AVDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             HHHHSCCCTTCCCTTC--CCHHHHHHHHTCHHHHHHHHHTTCCSS----CCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             ccccccccccccCCCC--CCHHHHHHHcCCHHHHHHHHHCcCCCC----CcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            8888788777777665  599999999999999999999999995    456699999999999999999999864

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=3.8e-28  Score=258.81  Aligned_cols=223  Identities=22%  Similarity=0.247  Sum_probs=181.8

Q ss_pred             cchhhHHhhcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcc
Q psy8898          25 LHPLHNACSFGHADVVRLLLE-ADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKD  103 (1236)
Q Consensus        25 ~t~L~~A~~~g~~~iv~~Ll~-~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (1236)
                      +||||+||.+|+.++|+.|++ .+.+++.+|.+|+||||+|+..|+.+++++                            
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~----------------------------   52 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSF----------------------------   52 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHH----------------------------
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccch----------------------------
Confidence            489999999999999999888 467899999999999999999999999988                            


Q ss_pred             hhHHHhcCCCCCC---cccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccC
Q psy8898         104 RSCYLAHGADPFL---KNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYS  180 (1236)
Q Consensus       104 v~~Ll~~ga~~~~---~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (1236)
                         |+++|++++.   .+..|.+|+++++..+..++++.++........                               
T Consensus        53 ---Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------   98 (229)
T d1ixva_          53 ---LLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-------------------------------   98 (229)
T ss_dssp             ---HHTTCTTCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCT-------------------------------
T ss_pred             ---hhhhhccccccccccccccccccccccccccccccccccccccccc-------------------------------
Confidence               9999999864   567788999999999999888877654211000                               


Q ss_pred             CCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q psy8898         181 GSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRL  260 (1236)
Q Consensus       181 ~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~  260 (1236)
                                                 ......+.|+|+.++..++.+++++|++.|.+.+..|.+|+||||+|+..|+.
T Consensus        99 ---------------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~  151 (229)
T d1ixva_          99 ---------------------------NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL  151 (229)
T ss_dssp             ---------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCH
T ss_pred             ---------------------------cccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccc
Confidence                                       00111367899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCc
Q psy8898         261 EVCSLLLSEG-ADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLP  339 (1236)
Q Consensus       261 ~iv~~Ll~~g-a~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~  339 (1236)
                      +++++|++.| .+++.+|.+|.||                                                        
T Consensus       152 ~~~~~Ll~~~~~~in~~d~~g~Tp--------------------------------------------------------  175 (229)
T d1ixva_         152 KLIELLCGLGKSAVNWQDKQGWTP--------------------------------------------------------  175 (229)
T ss_dssp             HHHHHHHTTTCCCSCCCCTTSCCH--------------------------------------------------------
T ss_pred             cccccccccccccccccccccCCc--------------------------------------------------------
Confidence            9999999987 5666666555554                                                        


Q ss_pred             hhHHHHHhhcChhHHHHHHHHHHHhhhhccCCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHH
Q psy8898         340 GTLLIDLLSDDKEFITVAEEMQATVREHRDNGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLL  419 (1236)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll  419 (1236)
                                                                                     ||.|++.|+.+++++|+
T Consensus       176 ---------------------------------------------------------------Lh~A~~~~~~~~v~~Ll  192 (229)
T d1ixva_         176 ---------------------------------------------------------------LFHALAEGHGDAAVLLV  192 (229)
T ss_dssp             ---------------------------------------------------------------HHHHHHTTCHHHHHHHH
T ss_pred             ---------------------------------------------------------------hhhhcccccHHHHHHHH
Confidence                                                                           55566778888888888


Q ss_pred             hhCCCcccccCCCCCCchHHHHHHhcCCHHHHHHHHhcCCC
Q psy8898         420 SSCPHIVNCRDLDGRHSTPLHFAAGYNRVAVVEYLLAHGAD  460 (1236)
Q Consensus       420 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~  460 (1236)
                      ++.|.+++..+.+|  +||||+|+.   .+++++|+++|+|
T Consensus       193 ~~~gad~~~~d~~g--~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         193 EKYGAEYDLVDNKG--AKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             HHHCCCSCCCCTTS--CCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             HhcCCCCCCcCCCC--CCHHHHHhh---HHHHHHHHHcCCC
Confidence            76678888877655  599998873   5788999998886

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.1e-27  Score=248.72  Aligned_cols=198  Identities=24%  Similarity=0.240  Sum_probs=166.6

Q ss_pred             CCcchhhHHhhcCCH----HHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCC
Q psy8898          23 GGLHPLHNACSFGHA----DVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGC   98 (1236)
Q Consensus        23 ~g~t~L~~A~~~g~~----~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~   98 (1236)
                      +|+||||+|+..|+.    ++++.|...|+++|..|.+|+||||+|+..|+.+++++                       
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~-----------------------   57 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEA-----------------------   57 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHC-----------------------
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCccccccccccccccccc-----------------------
Confidence            699999999999995    55667778899999999999999999999999999998                       


Q ss_pred             CCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCc
Q psy8898          99 PMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQ  178 (1236)
Q Consensus        99 ~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (1236)
                              |+++|++++..|..|.|||++|+..++.++++.++..........                           
T Consensus        58 --------L~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~---------------------------  102 (221)
T d1iknd_          58 --------LLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHS---------------------------  102 (221)
T ss_dssp             --------CCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSC---------------------------
T ss_pred             --------cccccccccccccccccccccccccccccccchhhhhcccccccc---------------------------
Confidence                    999999999999999999999999999999999987532110000                           


Q ss_pred             cCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHc
Q psy8898         179 YSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMD-LWQFTPLHEAASK  257 (1236)
Q Consensus       179 ~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d-~~g~TpL~~A~~~  257 (1236)
                                                 ........|.||||.|+..|+.+++++|++.|+.++..+ .+|+||||+|+..
T Consensus       103 ---------------------------~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~  155 (221)
T d1iknd_         103 ---------------------------ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL  155 (221)
T ss_dssp             ---------------------------GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred             ---------------------------cccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCcccccccc
Confidence                                       000111148899999999999999999999999988765 6799999999999


Q ss_pred             CcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccc
Q psy8898         258 SRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVV  326 (1236)
Q Consensus       258 g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~  326 (1236)
                      |+.+++++|+++|+|++.+|.+|+||||+|                     +..++.+++++|+.....
T Consensus       156 g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A---------------------~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         156 QNPDLVSLLLKCGADVNRVTYQGYSPYQLT---------------------WGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             TCHHHHHHHHTTTCCSCCCCTTCCCGGGGC---------------------TTSSCHHHHHHHHTTSCG
T ss_pred             ccHHHHHHHHhcCCcccccCCCCCCHHHHH---------------------HHCCCHHHHHHHHHcCCc
Confidence            999999999999999999999999997775                     678899999999876543

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.5e-26  Score=241.79  Aligned_cols=206  Identities=25%  Similarity=0.357  Sum_probs=171.2

Q ss_pred             CCCcchhhHHhhcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCC
Q psy8898          22 DGGLHPLHNACSFGHADVVRLLLE----ADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTG   97 (1236)
Q Consensus        22 ~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~   97 (1236)
                      ++|+||||+||..|+.++|+.|++    .|+++|..|..|+||||+|+..|+.+++++                      
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~----------------------   58 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRL----------------------   58 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHH----------------------
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccc----------------------
Confidence            479999999999999999998874    899999999999999999999999999988                      


Q ss_pred             CCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCC
Q psy8898          98 CPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPA  177 (1236)
Q Consensus        98 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (1236)
                               |+++|++.+.....|.++++.|...++.++++.............+...                      
T Consensus        59 ---------Ll~~ga~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  107 (228)
T d1k1aa_          59 ---------LVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARN----------------------  107 (228)
T ss_dssp             ---------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCC----------------------
T ss_pred             ---------cccccccccccccccccccccccccccccchhhhhhccccccccccccc----------------------
Confidence                     9999999999999999999999999999999887765422211111100                      


Q ss_pred             ccCCCCCCcccCCCCCCChhhhH-------HHhcCcCCcccc-----CCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCC
Q psy8898         178 QYSGSGGDSVSLPPTSPPQPLAL-------ETVIMPSGQAVA-----LGLVPLHNACSYGHFEVTEMLIKAGANVNAMDL  245 (1236)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~l~~~~-------~~~Ll~~g~~~~-----~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~  245 (1236)
                                  .....+++...       .+.|.....+..     .|.++|+.|+..+..++++.+++.|.+++.+|.
T Consensus       108 ------------~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~  175 (228)
T d1k1aa_         108 ------------YDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMY  175 (228)
T ss_dssp             ------------TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCT
T ss_pred             ------------cccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccccccccc
Confidence                        00113333322       444444443333     789999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhH
Q psy8898         246 WQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTREL  292 (1236)
Q Consensus       246 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~  292 (1236)
                      .|.||||+|+..|+.+++++|+++|+|++.+|.+|.||||+|...+.
T Consensus       176 ~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~  222 (228)
T d1k1aa_         176 SGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV  222 (228)
T ss_dssp             TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHH
T ss_pred             cCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCC
Confidence            99999999999999999999999999999999999999998865543

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.93  E-value=6.8e-26  Score=237.29  Aligned_cols=201  Identities=29%  Similarity=0.338  Sum_probs=164.7

Q ss_pred             HHHHHHHHHcCCCccc-cCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccC
Q psy8898           4 KDVVEYLLASGASIHA-RDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHS   82 (1236)
Q Consensus         4 ~~~v~~Ll~~ga~~n~-~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~   82 (1236)
                      .|+|++|+++|+|+|. .|.+|+||||+||+.|+.++|++|+++|+++|..+..+.++++.++..++......       
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~-------   74 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQI-------   74 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH-------
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhccccccccccccccccccccccccccccc-------
Confidence            4899999999999997 58999999999999999999999999999999999999999999999998776654       


Q ss_pred             ccccccccccCCCCCCCCCcchhHHHhcCC-CCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCc
Q psy8898          83 SKSNQYVYGIGGGTGCPMHKDRSCYLAHGA-DPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQ  161 (1236)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~  161 (1236)
                                              ...... ........|.++.+.+.......+.+.+...                  
T Consensus        75 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~------------------  112 (209)
T d1ot8a_          75 ------------------------LLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITA------------------  112 (209)
T ss_dssp             ------------------------HHTCTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHT------------------
T ss_pred             ------------------------cccccccccccccccccccccccccccchhhhhhhhhh------------------
Confidence                                    333322 2233445566777766666655555555442                  


Q ss_pred             ccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccc----cCCchHHHHHHhcCcHHHHHHHHhcC
Q psy8898         162 YSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAV----ALGLVPLHNACSYGHFEVTEMLIKAG  237 (1236)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~----~~g~T~L~~Aa~~g~~~iv~~Ll~~g  237 (1236)
                                                                    ++++    ..|.|||++|+..|..++++.|++.+
T Consensus       113 ----------------------------------------------~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~  146 (209)
T d1ot8a_         113 ----------------------------------------------DADINAADNSGKTALHWAAAVNNTEAVNILLMHH  146 (209)
T ss_dssp             ----------------------------------------------TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred             ----------------------------------------------cccccccCCCCCCcchhhcccCcceeeeeecccc
Confidence                                                          2221    15788999999999999999999999


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccchhHHHHhhhccCcchHHHHHHcCChHHH
Q psy8898         238 ANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPTRELQQRLSNEFKGHCLLEACRQGDPSRV  317 (1236)
Q Consensus       238 a~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v  317 (1236)
                      .+++..|..|.||||+|+..|+.++|++|+++|+|++.+|..|+||                     |+.|++.|+.++|
T Consensus       147 ~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tp---------------------l~~A~~~~~~~iv  205 (209)
T d1ot8a_         147 ANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLP---------------------RDVASERLHHDIV  205 (209)
T ss_dssp             CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH---------------------HHHHHHTTCHHHH
T ss_pred             ccccccccccccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCH---------------------HHHHHHcCCHHHH
Confidence            9999999999999999999999999999999999999989888888                     6668899999998


Q ss_pred             HHh
Q psy8898         318 KKF  320 (1236)
Q Consensus       318 ~~l  320 (1236)
                      ++|
T Consensus       206 ~lL  208 (209)
T d1ot8a_         206 RLL  208 (209)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            864

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-25  Score=236.83  Aligned_cols=213  Identities=23%  Similarity=0.245  Sum_probs=179.5

Q ss_pred             cchhHHHHHhcCcHHHHHHHHh----CCCCCccCCCCCCCHHHHHH-------HHHHHhcCCCCcccCCCCCChhhhhcc
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVK----HGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVP  612 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~----~g~~v~~~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~~~~g~t~L~~a~~  612 (1236)
                      |+||||+||..|+.++|+.|++    .|+++|.+|.+|+||||+|+       +++|+++|++.+..+..|.++++.|. 
T Consensus         3 G~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~-   81 (228)
T d1k1aa_           3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC-   81 (228)
T ss_dssp             TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH-
T ss_pred             CccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccccccccccccccccccccccccc-
Confidence            8999999999999999998875    79999999999999999997       67999999999999999999999996 


Q ss_pred             cCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhh
Q psy8898         613 CTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFL  692 (1236)
Q Consensus       613 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll  692 (1236)
                           .................                          .....+.......++|+.+...........|.
T Consensus        82 -----~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~  130 (228)
T d1k1aa_          82 -----EHRSPTCLRALLDSAAP--------------------------GTLDLEARNYDGLTALHVAVNTECQETVQLLL  130 (228)
T ss_dssp             -----HTTCHHHHHHHHHHSCT--------------------------TSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             -----ccccccchhhhhhcccc--------------------------ccccccccccccccccccccccccchhhhhhh
Confidence                 33444444433331100                          00111233445678999999999999999988


Q ss_pred             ccCCc-ccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccC
Q psy8898         693 TSDVV-NFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVD  771 (1236)
Q Consensus       693 ~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d  771 (1236)
                      ..... .......|.+||+.|+..   +..++++.++++|.+++.+|..|+||||+|+..|+.++|++|+++|+|+|.+|
T Consensus       131 ~~~~~~~~~~~~~~~~~l~~a~~~---~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d  207 (228)
T d1k1aa_         131 ERGADIDAVDIKSGRSPLIHAVEN---NSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN  207 (228)
T ss_dssp             HTTCCTTCCCTTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred             ccccccccccccchhhHHHHHHHh---hhhhhhhhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence            77553 333444599999999997   78999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHcCCHHHHH
Q psy8898         772 VLGQTALHRTARDDKTQAVR  791 (1236)
Q Consensus       772 ~~G~tpL~~A~~~~~~~iv~  791 (1236)
                      .+|+||||+|+++|+.++||
T Consensus       208 ~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         208 CHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             TTSCCTTTTCSSHHHHHHHT
T ss_pred             CCCCCHHHHHHhCCCccccC
Confidence            99999999999999999985

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4e-26  Score=241.04  Aligned_cols=184  Identities=33%  Similarity=0.337  Sum_probs=153.0

Q ss_pred             cchhHHHHHhcCcH----HHHHHHHhCCCCCccCCCCCCCHHHHHH-------HHHHHhcCCCCcccCCCCCChhhhhcc
Q psy8898         544 GLVPLHNACSYGHY----EVTEMLVKHGANVNVADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVP  612 (1236)
Q Consensus       544 g~t~L~~A~~~g~~----~iv~~Ll~~g~~v~~~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~~~~g~t~L~~a~~  612 (1236)
                      |.||||+|+..|+.    ++++++...|+++|..|.+|+||||+|+       +++|++.|++++..|..|.|||+.+  
T Consensus         2 G~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~--   79 (221)
T d1iknd_           2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLA--   79 (221)
T ss_dssp             CCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHH--
T ss_pred             CChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCccccccccccccccccccccccccccccccccccccccc--
Confidence            88999999999985    5556677789999999999999999987       4678888888888888877777665  


Q ss_pred             cCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhh
Q psy8898         613 CTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFL  692 (1236)
Q Consensus       613 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll  692 (1236)
                                                                                         +..++.++++.|+
T Consensus        80 -------------------------------------------------------------------~~~~~~~~~~~l~   92 (221)
T d1iknd_          80 -------------------------------------------------------------------CEQGCLASVGVLT   92 (221)
T ss_dssp             -------------------------------------------------------------------HHHTCHHHHHHHH
T ss_pred             -------------------------------------------------------------------cccccccccchhh
Confidence                                                                               5566777777777


Q ss_pred             ccCC------cccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCC-CCCchHHHHHHHhCCHHHHHHHHHCCC
Q psy8898         693 TSDV------VNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKN-KELLAPIHLAADLGHLDVLDTLLRLGA  765 (1236)
Q Consensus       693 ~~~~------~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d-~~G~T~Lh~A~~~g~~~iv~~Ll~~ga  765 (1236)
                      ..+.      ........|.||||.|+..   ++.+++++|++.|++++..+ ..|+||||+|++.|+.++|++|+++|+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~ga  169 (221)
T d1iknd_          93 QSCTTPHLHSILKATNYNGHTCLHLASIH---GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA  169 (221)
T ss_dssp             HSTTTTSSSCGGGCCCTTCCCHHHHHHHT---TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred             hhcccccccccccccccccchhhhHHhhc---CChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCC
Confidence            6532      2223334489999999997   78999999999999998775 579999999999999999999999999


Q ss_pred             CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8898         766 KVNLVDVLGQTALHRTARDDKTQAVRVLLSHNAD  799 (1236)
Q Consensus       766 ~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~  799 (1236)
                      |+|.+|.+|+||||+|++.++.+++++|++.+.+
T Consensus       170 d~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         170 DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             CSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             cccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence            9999999999999999999999999999998765

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.92  E-value=2.3e-27  Score=267.69  Aligned_cols=151  Identities=16%  Similarity=0.081  Sum_probs=111.9

Q ss_pred             HHHHHHHHHcCCCc-----------cccCCCCcchhhHHhhcCCHHHHHH---HHHCCCCCCCCCCCCCCHHHHHHHhCC
Q psy8898           4 KDVVEYLLASGASI-----------HARDDGGLHPLHNACSFGHADVVRL---LLEADANPNTRDNWNFTPLHEAAAKGK   69 (1236)
Q Consensus         4 ~~~v~~Ll~~ga~~-----------n~~d~~g~t~L~~A~~~g~~~iv~~---Ll~~ga~~n~~d~~g~t~L~~A~~~g~   69 (1236)
                      .++.++|...++++           +.+|..|.||||+||++||.+++++   |++.|+++|..|..|+||||+|+++||
T Consensus        59 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~  138 (346)
T d2ajaa1          59 EQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGH  138 (346)
T ss_dssp             HHHHHHHHHHHHHTTTTCTTHHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHcchhhccchhhhhhHHHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCC
Confidence            44556665554433           4567788999999999999877665   788899999999999999999999999


Q ss_pred             CceEEeeeccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCC
Q psy8898          70 TDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPS  149 (1236)
Q Consensus        70 ~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~  149 (1236)
                      .++|++                               |+++|++++..+..                             
T Consensus       139 ~~~v~~-------------------------------Ll~~g~~~~~~~~~-----------------------------  158 (346)
T d2ajaa1         139 LHVLNR-------------------------------LCELAPTEIMAMIQ-----------------------------  158 (346)
T ss_dssp             HHHHHH-------------------------------HHHSCTTTHHHHHS-----------------------------
T ss_pred             HHHHHH-------------------------------HHHcCCCccccccc-----------------------------
Confidence            999988                               88999887744321                             


Q ss_pred             CCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHH
Q psy8898         150 CAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEV  229 (1236)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~i  229 (1236)
                                                                                    .+|+||||+||++||.++
T Consensus       159 --------------------------------------------------------------~~g~t~L~~Aa~~g~~~i  176 (346)
T d2ajaa1         159 --------------------------------------------------------------AENYHAFRLAAENGHLHV  176 (346)
T ss_dssp             --------------------------------------------------------------HHHHHHHHHHHHTTCHHH
T ss_pred             --------------------------------------------------------------cCCCChhHHHHHHhhHHH
Confidence                                                                          026788888888888888


Q ss_pred             HHHHHhcCCCC---CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC
Q psy8898         230 TEMLIKAGANV---NAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLH  276 (1236)
Q Consensus       230 v~~Ll~~ga~~---n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~  276 (1236)
                      |++|++.|++.   +..+.+|.|||+.|+.+|+.++|++|++.|++++..
T Consensus       177 v~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~  226 (346)
T d2ajaa1         177 LNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYA  226 (346)
T ss_dssp             HHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHH
T ss_pred             HHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchH
Confidence            88888888764   333455677888888888888999888888776543

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.92  E-value=8.1e-25  Score=228.99  Aligned_cols=199  Identities=26%  Similarity=0.251  Sum_probs=165.6

Q ss_pred             HHHHHHHHhCCCCCcc-CCCCCCCHHHHHH-------HHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhHHHH
Q psy8898         557 YEVTEMLVKHGANVNV-ADLWKFTPLHEAA-------AKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKEELL  628 (1236)
Q Consensus       557 ~~iv~~Ll~~g~~v~~-~d~~g~tpL~~a~-------~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~~~l  628 (1236)
                      .|+|++|+++|+++|. .|.+|+||||+||       +++|++.|++++.++..+.++++.++.      ..........
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~------~~~~~~~~~~   75 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVA------ADAMGVFQIL   75 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHH
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccc------cccccccccc
Confidence            4789999999999987 5889999999997       578999999999999999999998862      2222222111


Q ss_pred             HHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChH
Q psy8898         629 EAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTP  708 (1236)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~  708 (1236)
                      ..                             ............+.++.+.+.........+.|...+......+..|+||
T Consensus        76 ~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~  126 (209)
T d1ot8a_          76 LR-----------------------------NRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTA  126 (209)
T ss_dssp             HT-----------------------------CTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBH
T ss_pred             cc-----------------------------ccccccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCc
Confidence            11                             0001111233456778888899999999999998887766677779999


Q ss_pred             HHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHH
Q psy8898         709 LHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQ  788 (1236)
Q Consensus       709 L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~  788 (1236)
                      |++++..   +..++++.|++++.+++.+|..|.||||+|+..|+.++|++|+++|+|+|.+|..|+||||+|+++|+.+
T Consensus       127 l~~~~~~---~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~  203 (209)
T d1ot8a_         127 LHWAAAV---NNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHD  203 (209)
T ss_dssp             HHHHHHT---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             chhhccc---CcceeeeeeccccccccccccccccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence            9999997   7899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q psy8898         789 AVRVL  793 (1236)
Q Consensus       789 iv~~L  793 (1236)
                      +|++|
T Consensus       204 iv~lL  208 (209)
T d1ot8a_         204 IVRLL  208 (209)
T ss_dssp             HHHHH
T ss_pred             HHhhc
Confidence            99986

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.7e-24  Score=209.72  Aligned_cols=153  Identities=27%  Similarity=0.319  Sum_probs=137.9

Q ss_pred             chhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcchh
Q psy8898          26 HPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRS  105 (1236)
Q Consensus        26 t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~  105 (1236)
                      +|||+||..|+.++|++|+++|+|+|.+|..|.||||+|+ .|+.+++++                              
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~------------------------------   51 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARR------------------------------   51 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHH------------------------------
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-ccccccccc------------------------------
Confidence            7999999999999999999999999999999999999886 789999887                              


Q ss_pred             HHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCCCC
Q psy8898         106 CYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGGD  185 (1236)
Q Consensus       106 ~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (1236)
                       |+++|++++..+..|.+|++.++..+..+.+..++......                                      
T Consensus        52 -Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~--------------------------------------   92 (156)
T d1ihba_          52 -LLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV--------------------------------------   92 (156)
T ss_dssp             -HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT--------------------------------------
T ss_pred             -ccccccccccccccCcccccccccccccccccccccccccc--------------------------------------
Confidence             99999999999999999999999999999999888653211                                      


Q ss_pred             cccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHHcCcHHHHH
Q psy8898         186 SVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGA-NVNAMDLWQFTPLHEAASKSRLEVCS  264 (1236)
Q Consensus       186 ~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga-~~n~~d~~g~TpL~~A~~~g~~~iv~  264 (1236)
                                            ......|.+|||+|+..|+.+++++|+++|+ +++.+|.+|+||||+|+..|+.++|+
T Consensus        93 ----------------------~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~  150 (156)
T d1ihba_          93 ----------------------NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVS  150 (156)
T ss_dssp             ----------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             ----------------------cccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHH
Confidence                                  0011148899999999999999999999986 89999999999999999999999999


Q ss_pred             HHHhCC
Q psy8898         265 LLLSEG  270 (1236)
Q Consensus       265 ~Ll~~g  270 (1236)
                      +|+++|
T Consensus       151 ~Ll~~G  156 (156)
T d1ihba_         151 LMQANG  156 (156)
T ss_dssp             HHHHTC
T ss_pred             HHHhcC
Confidence            999987

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.8e-23  Score=203.30  Aligned_cols=153  Identities=24%  Similarity=0.283  Sum_probs=133.7

Q ss_pred             hhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHHHHHHhcCCCCcccCCCCCChhhhhcccCcccccCCchhH
Q psy8898         546 VPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAAKALLQHGADINLKNTDGKTALDLAVPCTRAVLSGDHKKE  625 (1236)
Q Consensus       546 t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~~~Ll~~g~d~~~~~~~g~t~L~~a~~~~~~~~~~~~~~~  625 (1236)
                      +|||+||..|+.++|++|+++|+++|.+|.+|.||||+                          |+              
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~--------------------------A~--------------   42 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQV--------------------------MK--------------   42 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHH--------------------------CC--------------
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccc--------------------------cc--------------
Confidence            79999999999999999999998887766555555443                          31              


Q ss_pred             HHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhhccCCcccCCCCCC
Q psy8898         626 ELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTG  705 (1236)
Q Consensus       626 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g  705 (1236)
                                                                              .|+.+++++|++.+......+..|
T Consensus        43 --------------------------------------------------------~~~~ei~~~Ll~~~a~~~~~~~~~   66 (156)
T d1ihba_          43 --------------------------------------------------------LGNPEIARRLLLRGANPDLKDRTG   66 (156)
T ss_dssp             --------------------------------------------------------SSCHHHHHHHHHTTCCTTCCCTTS
T ss_pred             --------------------------------------------------------cccccccccccccccccccccccC
Confidence                                                                    356677888888777666666678


Q ss_pred             ChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCC-CccccCCCCCcHHHHHHHc
Q psy8898         706 DTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGA-KVNLVDVLGQTALHRTARD  784 (1236)
Q Consensus       706 ~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga-~~n~~d~~G~tpL~~A~~~  784 (1236)
                      .++|+.++..   ++.+.+++|++.+.+++..|..|.+|||+|+..++.+++++|+++|+ +++.+|.+|+||||+|++.
T Consensus        67 ~~~l~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~  143 (156)
T d1ihba_          67 FAVIHDAARA---GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY  143 (156)
T ss_dssp             CCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHT
T ss_pred             cccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHc
Confidence            8888888886   78999999999999999999999999999999999999999999986 8999999999999999999


Q ss_pred             CCHHHHHHHHhCC
Q psy8898         785 DKTQAVRVLLSHN  797 (1236)
Q Consensus       785 ~~~~iv~~Ll~~g  797 (1236)
                      ++.+++++|+++|
T Consensus       144 ~~~~iv~~Ll~~G  156 (156)
T d1ihba_         144 GRNEVVSLMQANG  156 (156)
T ss_dssp             TCHHHHHHHHHTC
T ss_pred             CCHHHHHHHHhcC
Confidence            9999999999987

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.1e-22  Score=200.75  Aligned_cols=110  Identities=24%  Similarity=0.317  Sum_probs=100.8

Q ss_pred             CCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHH
Q psy8898         683 GDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLR  762 (1236)
Q Consensus       683 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~  762 (1236)
                      |+.+++++|++++......+..|.+||+.++..   ++.+++++++++|+++|.+|..|+||||+|++.|+.+++++|+ 
T Consensus        46 ~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-  121 (156)
T d1bd8a_          46 GSTAIALELLKQGASPNVQDTSGTSPVHDAART---GFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-  121 (156)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-
T ss_pred             ccccccccccccccccccccccccccccccccc---ccccccccccccccccccccCCCCeeecccccccccccccccc-
Confidence            566788888888776666666799999999997   7899999999999999999999999999999999999999887 


Q ss_pred             CCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8898         763 LGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSH  796 (1236)
Q Consensus       763 ~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~  796 (1236)
                      .|++++.+|.+|+||||+|++.|+.+++++|++|
T Consensus       122 ~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         122 AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            7899999999999999999999999999999986

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=1.3e-22  Score=200.09  Aligned_cols=114  Identities=25%  Similarity=0.378  Sum_probs=102.0

Q ss_pred             HHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHH
Q psy8898         677 LEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGHLDV  756 (1236)
Q Consensus       677 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~i  756 (1236)
                      |+|+..++.+.+..++............+.++++.++..   .+.+++++++.+|++++.+|..|+||||+|+..|+.++
T Consensus        39 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~i  115 (153)
T d1awcb_          39 HLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASE---GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV  115 (153)
T ss_dssp             HHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHH---TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccc---ccceeeecccccCCccccccccCchHHHhhhhcchhhe
Confidence            334566777888888877766666666688999999886   78999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy8898         757 LDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVL  793 (1236)
Q Consensus       757 v~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~L  793 (1236)
                      |++|+++|+++|.+|.+|.||||+|+.+|+.|++++|
T Consensus       116 v~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_         116 VELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            9999999999999999999999999999999999987

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.4e-22  Score=199.98  Aligned_cols=151  Identities=23%  Similarity=0.344  Sum_probs=125.8

Q ss_pred             chhhHHhhcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcch
Q psy8898          26 HPLHNACSFGHADVVRLLLEA-DANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDR  104 (1236)
Q Consensus        26 t~L~~A~~~g~~~iv~~Ll~~-ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v  104 (1236)
                      ++|+.||..|+.++|+.|++. ++++|..|..|+||||+|+. |+.++++.                             
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~~-~~~~~v~~-----------------------------   53 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALE-----------------------------   53 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCT-TCHHHHHH-----------------------------
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCcccccccc-cccccccc-----------------------------
Confidence            458888888888888888875 67888888888888888864 77787776                             


Q ss_pred             hHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCCC
Q psy8898         105 SCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGG  184 (1236)
Q Consensus       105 ~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (1236)
                        |++++++++..+..|.+|++.++..++.++++.+++.....                  +                  
T Consensus        54 --Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~------------------n------------------   95 (156)
T d1bd8a_          54 --LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV------------------N------------------   95 (156)
T ss_dssp             --HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS------------------C------------------
T ss_pred             --ccccccccccccccccccccccccccccccccccccccccc------------------c------------------
Confidence              88888888888888888888888888888888877653110                  0                  


Q ss_pred             CcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHH
Q psy8898         185 DSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVCS  264 (1236)
Q Consensus       185 ~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~  264 (1236)
                                              .....|.||||+||..|+.+++++|+ .|++++.+|.+|+||||+|+..|+.++++
T Consensus        96 ------------------------~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~  150 (156)
T d1bd8a_          96 ------------------------VPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVD  150 (156)
T ss_dssp             ------------------------CCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred             ------------------------cccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHH
Confidence                                    00114889999999999999999888 68999999999999999999999999999


Q ss_pred             HHHhC
Q psy8898         265 LLLSE  269 (1236)
Q Consensus       265 ~Ll~~  269 (1236)
                      +|+++
T Consensus       151 ~Ll~h  155 (156)
T d1bd8a_         151 ILQGH  155 (156)
T ss_dssp             HHHTT
T ss_pred             HHHhh
Confidence            99986

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.88  E-value=2.1e-24  Score=243.15  Aligned_cols=230  Identities=15%  Similarity=0.115  Sum_probs=154.3

Q ss_pred             CCchHHHHHHhcCcHHHHHH---HHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCccccccc
Q psy8898         213 LGLVPLHNACSYGHFEVTEM---LIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAPT  289 (1236)
Q Consensus       213 ~g~T~L~~Aa~~g~~~iv~~---Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~~  289 (1236)
                      .|.||||+||++|+.+++++   |++.|+++|.+|.+|+||||+|++.|+.++|++|+++|++++..+..          
T Consensus        89 ~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~----------  158 (346)
T d2ajaa1          89 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQ----------  158 (346)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHS----------
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccc----------
Confidence            68999999999999887775   78999999999999999999999999999999999999987643310          


Q ss_pred             hhHHHHhhhccCcchHHHHHHcCChHHHHHhhhcccccCCCCCCCCCCCchhHHHHHhhcChhHHHHHHHHHHHhhhhcc
Q psy8898         290 RELQQRLSNEFKGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLPGTLLIDLLSDDKEFITVAEEMQATVREHRD  369 (1236)
Q Consensus       290 ~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (1236)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (346)
T d2ajaa1         159 --------------------------------------------------------------------------------  158 (346)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccHHHHhhhhhhhhhcCCCCcCchhhHHHHHHhCCCHHHHHHHHhhCCCc--ccccCCCCCCchHHHHHHhcCC
Q psy8898         370 NGQSGGYTALQVAGENSKKLLQEPPSVVDLESQLLEASKGGDMTVVTRLLSSCPHI--VNCRDLDGRHSTPLHFAAGYNR  447 (1236)
Q Consensus       370 ~~~~~g~t~l~~a~~~~~~~l~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~~~g~t~L~~A~~~g~  447 (1236)
                                                 .++.||||.|++.|+.++|++|++.++..  .+..+.++  .||++.|+..|+
T Consensus       159 ---------------------------~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~--~t~l~~A~~~g~  209 (346)
T d2ajaa1         159 ---------------------------AENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENY--YAFRWAAVGRGH  209 (346)
T ss_dssp             ---------------------------HHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHH--HHHHHHHSTTCC
T ss_pred             ---------------------------cCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCC--cchhhHHhhcCH
Confidence                                       12334555666666666666666653221  12222222  367777778888


Q ss_pred             HHHHHHHHhcCCCCCCCCC---CCccCCCChHHHHHhcCchHHHhhcCCCCCCCC-------------CchhHHHHHHhc
Q psy8898         448 VAVVEYLLAHGADVHSKDN---ATDKWGFTPLHEAAQKGRTQLSALLPLSPSAAN-------------DPLRELFEACKG  511 (1236)
Q Consensus       448 ~~iv~~Ll~~ga~~~~~~~---~~d~~g~t~L~~A~~~~~~~iv~~L~~~~~~~~-------------~~~~~L~~A~~~  511 (1236)
                      .++|++|+++|++++..+.   .....+.++++.+...+..+....+........             ...++++.++..
T Consensus       210 ~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~  289 (346)
T d2ajaa1         210 HNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDE  289 (346)
T ss_dssp             HHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCG
T ss_pred             HHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcC
Confidence            8888888888776542211   112234456666666666665555543322111             124678888899


Q ss_pred             CChHHHHHHhCCCCcccccccCCCCchhhhhccchhHHHHHhcCcHHHHHHHHhC
Q psy8898         512 GDLTKVKKLVNPQTVNARDTAGRKSTPLHFAAGLVPLHNACSYGHYEVTEMLVKH  566 (1236)
Q Consensus       512 g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~~~g~t~L~~A~~~g~~~iv~~Ll~~  566 (1236)
                      +..+++++|++..........+.  ++   ..|.||||+||+.|+.++|++|++.
T Consensus       290 ~~ld~v~~Ll~~~~~~~~~~~~~--~~---~~g~T~LhlA~~~Gn~e~v~lLL~~  339 (346)
T d2ajaa1         290 VLLDDIRFLLSIPGIKALAPTAT--IP---GDANELLRLALRLGNQGACALLLSI  339 (346)
T ss_dssp             GGHHHHHHHHTSTTTGGGSSCCS--ST---TCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred             ChHHHHHHHHhCcChhhhccccc--CC---CCCCcHHHHHHHcCcHHHHHHHhCC
Confidence            99999999998765432221110  00   0278999999999999999999964

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=1.5e-22  Score=199.45  Aligned_cols=151  Identities=25%  Similarity=0.285  Sum_probs=134.0

Q ss_pred             CcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcc
Q psy8898          24 GLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKD  103 (1236)
Q Consensus        24 g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (1236)
                      ..||||.||+.|+.++|++||++|++++ .|..|+||||+|+..++.++++.                            
T Consensus         2 ~~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~----------------------------   52 (153)
T d1awcb_           2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEV----------------------------   52 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHH----------------------------
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCccccccccccccccccc----------------------------
Confidence            3599999999999999999999999988 68999999999999999999877                            


Q ss_pred             hhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCC
Q psy8898         104 RSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSG  183 (1236)
Q Consensus       104 v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (1236)
                         ++.........+..+.++++.++...+.+.++.++......                                    
T Consensus        53 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------------------------------   93 (153)
T d1awcb_          53 ---LLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADV------------------------------------   93 (153)
T ss_dssp             ---HHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT------------------------------------
T ss_pred             ---cccccccccccccccccccccccccccceeeecccccCCcc------------------------------------
Confidence               88888888888889999999999999999998887542110                                    


Q ss_pred             CCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q psy8898         184 GDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVC  263 (1236)
Q Consensus       184 ~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv  263 (1236)
                                              ......|+||||+||..|+.++|++|+++|++++.+|.+|+||||+|+.+|+.|++
T Consensus        94 ------------------------~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv  149 (153)
T d1awcb_          94 ------------------------NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA  149 (153)
T ss_dssp             ------------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             ------------------------ccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHH
Confidence                                    01112589999999999999999999999999999999999999999999999999


Q ss_pred             HHH
Q psy8898         264 SLL  266 (1236)
Q Consensus       264 ~~L  266 (1236)
                      ++|
T Consensus       150 ~lL  152 (153)
T d1awcb_         150 EIL  152 (153)
T ss_dssp             HHH
T ss_pred             HhC
Confidence            976

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=1e-22  Score=225.27  Aligned_cols=188  Identities=19%  Similarity=0.146  Sum_probs=128.1

Q ss_pred             HcCCCcccc-CCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCC---CceEEeeeccccCccccc
Q psy8898          12 ASGASIHAR-DDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGK---TDVCIGIYFAEHSSKSNQ   87 (1236)
Q Consensus        12 ~~ga~~n~~-d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~---~~iv~~Ll~~~~~~~~~~   87 (1236)
                      ..++++|.. |.+|+||||+||..|+.++|++|+++||+++.+|..|+||||.|+..++   .+.+..            
T Consensus        94 ~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~------------  161 (301)
T d1sw6a_          94 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEA------------  161 (301)
T ss_dssp             TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHH------------
T ss_pred             ccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHH------------
Confidence            357889976 9999999999999999999999999999999999999999999998875   222221            


Q ss_pred             cccccCCCCCCCCCcchhHHHh-cCCCCCCcccCCCCcchhhcccCh----HHHHHHHHhcCCCCCCCCCCCCCCCCCcc
Q psy8898          88 YVYGIGGGTGCPMHKDRSCYLA-HGADPFLKNQEGQTPLDLTVAEDV----RSLLQDAMAQYPGAPSCAETASVPPPSQY  162 (1236)
Q Consensus        88 ~~~~~~~~~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~~~----~~~v~~l~~~~~~~~~~~~~~~~~~~~~~  162 (1236)
                                         +++ .+.++...|..|+||||+++..+.    ..+++..++                    
T Consensus       162 -------------------ll~~l~~~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~--------------------  202 (301)
T d1sw6a_         162 -------------------LLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLD--------------------  202 (301)
T ss_dssp             -------------------HHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHH--------------------
T ss_pred             -------------------HHHHHhhhhhhcccccCCHHHHHHHHhCccccHHHHHHHHH--------------------
Confidence                               222 234466778899999998886432    222221111                    


Q ss_pred             cccccCCCCCCCCCCccCCCCCCcccCCCCCCChhhhHHHhcCcCCcccc-----CCchHHHHHHhcCcHHHHH-----H
Q psy8898         163 SNTSCGDNVSLPPPAQYSGSGGDSVSLPPTSPPQPLALETVIMPSGQAVA-----LGLVPLHNACSYGHFEVTE-----M  232 (1236)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~-----~g~T~L~~Aa~~g~~~iv~-----~  232 (1236)
                                                          .++.++++.+....     .+.++++.+........+.     .
T Consensus       203 ------------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (301)
T d1sw6a_         203 ------------------------------------ILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKW  246 (301)
T ss_dssp             ------------------------------------HHHHHHHHGGGCCEEEC----------------CHHHHHCSHHH
T ss_pred             ------------------------------------HHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHH
Confidence                                                01112222221111     2334444444433333322     2


Q ss_pred             HHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCcccccc
Q psy8898         233 LIKAGANVNAMDLWQFTPLHEAASKSRLEVCSLLLSEGADPTLHNCHSKSAIDVAP  288 (1236)
Q Consensus       233 Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~a~  288 (1236)
                      ++.  ..+|.+|..|+||||+|+++|+.++|++|+++||+++.+|..|.|||++|+
T Consensus       247 ~~~--~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         247 IIA--NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             HHH--HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             HHh--cCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHcC
Confidence            333  237889999999999999999999999999999999999999999999984

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-22  Score=191.32  Aligned_cols=121  Identities=29%  Similarity=0.415  Sum_probs=108.2

Q ss_pred             CcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcc
Q psy8898          24 GLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKD  103 (1236)
Q Consensus        24 g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (1236)
                      +.++||+||..|+.++|++|+++|+++|..|..|.||||.|+ .|+.+++++                            
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~----------------------------   53 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAEL----------------------------   53 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHH----------------------------
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccc----------------------------
Confidence            568999999999999999999999999999999999998765 688888877                            


Q ss_pred             hhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCC
Q psy8898         104 RSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSG  183 (1236)
Q Consensus       104 v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (1236)
                         |+++|++++.++..|                                                              
T Consensus        54 ---Ll~~ga~~~~~~~~~--------------------------------------------------------------   68 (125)
T d1bi7b_          54 ---LLLHGAEPNCADPAT--------------------------------------------------------------   68 (125)
T ss_dssp             ---HHTTTCCCCCCCTTT--------------------------------------------------------------
T ss_pred             ---ccccccccccccccc--------------------------------------------------------------
Confidence               999999887665432                                                              


Q ss_pred             CCcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q psy8898         184 GDSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDLWQFTPLHEAASKSRLEVC  263 (1236)
Q Consensus       184 ~~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~~g~TpL~~A~~~g~~~iv  263 (1236)
                                                    +.||||+||+.|+.++|++|+++|++++.+|.+|+||||+|++.|+.+++
T Consensus        69 ------------------------------~~~~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v  118 (125)
T d1bi7b_          69 ------------------------------LTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVA  118 (125)
T ss_dssp             ------------------------------CCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHH
T ss_pred             ------------------------------cccccccccccccccccccccccccccccccCCCCCHHHHHHHcCCHHHH
Confidence                                          34689999999999999999999999999999999999999999999999


Q ss_pred             HHHHh
Q psy8898         264 SLLLS  268 (1236)
Q Consensus       264 ~~Ll~  268 (1236)
                      ++|++
T Consensus       119 ~~Lls  123 (125)
T d1bi7b_         119 RYLRA  123 (125)
T ss_dssp             HHHSS
T ss_pred             HHHHh
Confidence            99986

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.5e-22  Score=187.92  Aligned_cols=120  Identities=24%  Similarity=0.326  Sum_probs=112.4

Q ss_pred             cccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCc-hHHHHHHH
Q psy8898         672 KGHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELL-APIHLAAD  750 (1236)
Q Consensus       672 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~-T~Lh~A~~  750 (1236)
                      +.++||.|+..|+.++|++|++++......+..|+||||+|+.    ++.+++++|+++|+++|.+|..|. ||||+|++
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~~----g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~   78 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM----GSARVAELLLLHGAEPNCADPATLTRPVHDAAR   78 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSCT----TCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCcccccccccccccccccc----ccccccccccccccccccccccccccccccccc
Confidence            4579999999999999999999988777777789999997764    789999999999999999998876 69999999


Q ss_pred             hCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8898         751 LGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLS  795 (1236)
Q Consensus       751 ~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~  795 (1236)
                      .|+.++|++|+++|++++.+|..|+||||+|+++|+.+++++|++
T Consensus        79 ~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          79 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             cccccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999999999999999999999999999999999986

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=6e-21  Score=185.19  Aligned_cols=128  Identities=21%  Similarity=0.215  Sum_probs=113.9

Q ss_pred             cHHHHHHHcCCHHHHHHhhccCCcccC------CCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHH
Q psy8898         674 HCLLEACRQGDPSRVKKFLTSDVVNFK------HPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHL  747 (1236)
Q Consensus       674 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~------~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~  747 (1236)
                      ..|..|++.+++..+..++..+.+...      .+..|+||||+|+..+..++.++|++|+++|+|+|.+|..|+||||+
T Consensus         8 ~~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~   87 (154)
T d1dcqa1           8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY   87 (154)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhcccccc
Confidence            367889999999999999887643222      24459999999998655578999999999999999999999999999


Q ss_pred             HHHhCCHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q psy8898         748 AADLGHLDVLDTLLRLGAKVNLVDVLGQTALHRTARDDKTQAVRVLLSHNADTS  801 (1236)
Q Consensus       748 A~~~g~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~~~~~~~iv~~Ll~~ga~~~  801 (1236)
                      ||+.|+.++|++|+++|++++.+|.+|+||||+|++.|+.+++++|++.++...
T Consensus        88 A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~~  141 (154)
T d1dcqa1          88 CCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF  141 (154)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred             ccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence            999999999999999999999999999999999999999999999999876543

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=3.1e-22  Score=185.96  Aligned_cols=107  Identities=29%  Similarity=0.370  Sum_probs=99.4

Q ss_pred             ccHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhC
Q psy8898         673 GHCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLG  752 (1236)
Q Consensus       673 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g  752 (1236)
                      .|||++|++.|+.++|++|++++......+..|+||||+|+..   ++.+++++|+++|+|+|.+|..|+||||+|++.|
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~---~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~   79 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADC---GQLEILEFLLLKGADINAPDKHHITPLLSAVYEG   79 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHH---STTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTT
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccc---cccccccccccccceeeecccccccchhhhhhcC
Confidence            4799999999999999999999887777777899999999997   7889999999999999999999999999999999


Q ss_pred             CHHHHHHHHHCCCCccccCCCCCcHHHHHH
Q psy8898         753 HLDVLDTLLRLGAKVNLVDVLGQTALHRTA  782 (1236)
Q Consensus       753 ~~~iv~~Ll~~ga~~n~~d~~G~tpL~~A~  782 (1236)
                      +.++|++|+++|+|+|.+|.+|+||||+|.
T Consensus        80 ~~~~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          80 HVSCVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             CCHHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             chhhhhhhhcccccceeeCCCCCCHHHHHh
Confidence            999999999999999999999999999883

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=2.6e-21  Score=213.72  Aligned_cols=177  Identities=21%  Similarity=0.223  Sum_probs=112.1

Q ss_pred             cchhHHHHHhcCcHHHHHHHHhCCCCCccCCCCCCCHHHHHHH----------HHHHh-cCCCCcccCCCCCChhhhhcc
Q psy8898         544 GLVPLHNACSYGHYEVTEMLVKHGANVNVADLWKFTPLHEAAA----------KALLQ-HGADINLKNTDGKTALDLAVP  612 (1236)
Q Consensus       544 g~t~L~~A~~~g~~~iv~~Ll~~g~~v~~~d~~g~tpL~~a~~----------~~Ll~-~g~d~~~~~~~g~t~L~~a~~  612 (1236)
                      |+||||+||..|+.++|++|+++|++++.+|..|+||||.|+.          ..+++ ...+++..|..|+||||.++.
T Consensus       107 G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d~~g~t~lh~~~~  186 (301)
T d1sw6a_         107 GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIII  186 (301)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhcccccCCHHHHHHH
Confidence            7788888888899999999999999999999999999998873          12222 244567778888888887751


Q ss_pred             cCcccccCCchhHHHHHHHHHhCCCcccccCCCCCCCCCcccccccccccccccchhhccccHHHHHHHcCCHHHHHHhh
Q psy8898         613 CTRAVLSGDHKKEELLEAARMMGGGLHRYTWPLGTTDIGWCSCCCKMELMFMPRIKDEFKGHCLLEACRQGDPSRVKKFL  692 (1236)
Q Consensus       613 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll  692 (1236)
                      ...  ...                                                       ...+++.....++.+++
T Consensus       187 ~~~--~~~-------------------------------------------------------~~~~~~~~~~~~~~~l~  209 (301)
T d1sw6a_         187 TSG--MTG-------------------------------------------------------CSAAAKYYLDILMGWIV  209 (301)
T ss_dssp             HHT--STT-------------------------------------------------------CHHHHHHHHHHHHHHHH
T ss_pred             HhC--ccc-------------------------------------------------------cHHHHHHHHHHHHHHHH
Confidence            110  000                                                       00111111112334444


Q ss_pred             ccCC-cccCCCCCCChHHHHHhhCCCCChHHH-----HHHHHHcCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHHCCCC
Q psy8898         693 TSDV-VNFKHPYTGDTPLHCAVTSPYPKRKAI-----VESLIRKGAHLNEKNKELLAPIHLAADLGHLDVLDTLLRLGAK  766 (1236)
Q Consensus       693 ~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~i-----v~~Ll~~gadin~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~ga~  766 (1236)
                      ..+. ........+.++++.+...   .....     +..++.  ..+|.+|..|+||||+|++.|+.++|++|+++||+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd  284 (301)
T d1sw6a_         210 KKQNRPIQSGTNEKESKPNDKNGE---RKDSILENLDLKWIIA--NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD  284 (301)
T ss_dssp             HGGGCCEEEC-------------------CHHHHHCSHHHHHH--HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC
T ss_pred             hcCCcchhcccccccchhHHHHhc---chHHHHHHHhhHHHHh--cCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            4433 2222223355566555543   11111     122333  34789999999999999999999999999999999


Q ss_pred             ccccCCCCCcHHHHHH
Q psy8898         767 VNLVDVLGQTALHRTA  782 (1236)
Q Consensus       767 ~n~~d~~G~tpL~~A~  782 (1236)
                      ++.+|+.|+|||++|+
T Consensus       285 ~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         285 PFIANKSGLRPVDFGA  300 (301)
T ss_dssp             TTCCCTTSCCGGGGTC
T ss_pred             CCCCCCCCCCHHHHcC
Confidence            9999999999999985

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=8.1e-21  Score=179.68  Aligned_cols=121  Identities=25%  Similarity=0.262  Sum_probs=110.7

Q ss_pred             cHHHHHHHcCCHHHHHHhhccCCcccCCCCCCChHHHHHhhCCCCChHHHHHHHHHcCCCCCCCCCCCchHHHHHHHhCC
Q psy8898         674 HCLLEACRQGDPSRVKKFLTSDVVNFKHPYTGDTPLHCAVTSPYPKRKAIVESLIRKGAHLNEKNKELLAPIHLAADLGH  753 (1236)
Q Consensus       674 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~iv~~Ll~~gadin~~d~~G~T~Lh~A~~~g~  753 (1236)
                      +.|+.||..|+.++|++|++++.+....+..|+||||+|+..   ++.+++++|+++|+++|.+|.+|+||||+|+.+|+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~---~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~   79 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA---GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNN   79 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH---TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCcccccccccccccccccc---ccccccccccccccccccccccCcccccccchhhH
Confidence            579999999999999999999988777888899999999997   88999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCccccCC-CCCcHHHHH--HHcCCHHHHHHHHhCC
Q psy8898         754 LDVLDTLLRLGAKVNLVDV-LGQTALHRT--ARDDKTQAVRVLLSHN  797 (1236)
Q Consensus       754 ~~iv~~Ll~~ga~~n~~d~-~G~tpL~~A--~~~~~~~iv~~Ll~~g  797 (1236)
                      .++|++|+++|++++..+. .|.||++++  +++|+.+++++|++.+
T Consensus        80 ~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1          80 VQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhHH
Confidence            9999999999999998774 588887776  5778999999998754

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=3.4e-21  Score=178.77  Aligned_cols=100  Identities=31%  Similarity=0.465  Sum_probs=96.8

Q ss_pred             CCcHHHHHHHHHcCCCccccCCCCcchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccc
Q psy8898           1 YGRKDVVEYLLASGASIHARDDGGLHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAE   80 (1236)
Q Consensus         1 ~G~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~   80 (1236)
                      +|++++|++|+++|+++|.+|.+|+||||+||..|+.+++++|+++|+++|.+|..|+||||+|+.+|+.+++++     
T Consensus        12 ~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~~v~~-----   86 (118)
T d1myoa_          12 NGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKL-----   86 (118)
T ss_dssp             TTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCHHHHH-----
T ss_pred             CCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchhhhhh-----
Confidence            599999999999999999999999999999999999999999999999999999999999999999999999988     


Q ss_pred             cCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhccc
Q psy8898          81 HSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAE  131 (1236)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~  131 (1236)
                                                |+++|+|++.+|.+|+||||+|...
T Consensus        87 --------------------------Ll~~Gad~~~~d~~G~t~l~~a~~~  111 (118)
T d1myoa_          87 --------------------------LLSKGADKTVKGPDGLTALEATDNQ  111 (118)
T ss_dssp             --------------------------HHTTCCCSSSSSSSTCCCCCTCSST
T ss_pred             --------------------------hhcccccceeeCCCCCCHHHHHhHH
Confidence                                      9999999999999999999999653

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.5e-20  Score=177.88  Aligned_cols=121  Identities=23%  Similarity=0.325  Sum_probs=107.0

Q ss_pred             cchhhHHhhcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCceEEeeeccccCccccccccccCCCCCCCCCcch
Q psy8898          25 LHPLHNACSFGHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDVCIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDR  104 (1236)
Q Consensus        25 ~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v  104 (1236)
                      .++||.||..|+.++|++|+++|+|+|.+|.+|+||||+|+..|+.+++++                             
T Consensus         2 l~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~-----------------------------   52 (130)
T d1ycsb1           2 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKF-----------------------------   52 (130)
T ss_dssp             HHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHH-----------------------------
T ss_pred             hHHHHHHHHcCCHHHHHHHHHcCCCcccccccccccccccccccccccccc-----------------------------
Confidence            368999999999999999999999999999999999999999999999988                             


Q ss_pred             hHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCccCCCCC
Q psy8898         105 SCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYPGAPSCAETASVPPPSQYSNTSCGDNVSLPPPAQYSGSGG  184 (1236)
Q Consensus       105 ~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (1236)
                        |+++|++++.+|.+                                                                
T Consensus        53 --ll~~g~~~~~~d~~----------------------------------------------------------------   66 (130)
T d1ycsb1          53 --LVQFGVNVNAADSD----------------------------------------------------------------   66 (130)
T ss_dssp             --HHHHTCCTTCCCTT----------------------------------------------------------------
T ss_pred             --cccccccccccccc----------------------------------------------------------------
Confidence              99999998876654                                                                


Q ss_pred             CcccCCCCCCChhhhHHHhcCcCCccccCCchHHHHHHhcCcHHHHHHHHhcCCCCCCCCC-CCCcHHHHH--HHcCcHH
Q psy8898         185 DSVSLPPTSPPQPLALETVIMPSGQAVALGLVPLHNACSYGHFEVTEMLIKAGANVNAMDL-WQFTPLHEA--ASKSRLE  261 (1236)
Q Consensus       185 ~~~~~~~~~~~l~~~~~~~Ll~~g~~~~~g~T~L~~Aa~~g~~~iv~~Ll~~ga~~n~~d~-~g~TpL~~A--~~~g~~~  261 (1236)
                                                   |+||||+||.+|+.++|++|+++|++++..+. .|+||++++  +.+|+.+
T Consensus        67 -----------------------------g~tpLh~A~~~g~~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~e  117 (130)
T d1ycsb1          67 -----------------------------GWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQ  117 (130)
T ss_dssp             -----------------------------CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCC
T ss_pred             -----------------------------CcccccccchhhHHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHH
Confidence                                         55678888888999999999999999998764 588887765  5778899


Q ss_pred             HHHHHHhC
Q psy8898         262 VCSLLLSE  269 (1236)
Q Consensus       262 iv~~Ll~~  269 (1236)
                      ++++|++.
T Consensus       118 iv~~L~~~  125 (130)
T d1ycsb1         118 CSQFLYGV  125 (130)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhH
Confidence            99999875

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=7.7e-19  Score=170.14  Aligned_cols=113  Identities=17%  Similarity=0.140  Sum_probs=104.9

Q ss_pred             CcHHHHHHHHHcCCCcccc------CCCCcchhhHHhhc---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCCCce
Q psy8898           2 GRKDVVEYLLASGASIHAR------DDGGLHPLHNACSF---GHADVVRLLLEADANPNTRDNWNFTPLHEAAAKGKTDV   72 (1236)
Q Consensus         2 G~~~~v~~Ll~~ga~~n~~------d~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~~n~~d~~g~t~L~~A~~~g~~~i   72 (1236)
                      +++..+..++..|+|++.+      +..|+||||+|++.   |+.++|++|+++|+++|.+|..|+||||+|+..|+.++
T Consensus        17 ~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~   96 (154)
T d1dcqa1          17 RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAEC   96 (154)
T ss_dssp             TCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             CCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhccccccccccccccc
Confidence            5677888899999998765      78899999999975   68899999999999999999999999999999999999


Q ss_pred             EEeeeccccCccccccccccCCCCCCCCCcchhHHHhcCCCCCCcccCCCCcchhhcccChHHHHHHHHhcCC
Q psy8898          73 CIGIYFAEHSSKSNQYVYGIGGGTGCPMHKDRSCYLAHGADPFLKNQEGQTPLDLTVAEDVRSLLQDAMAQYP  145 (1236)
Q Consensus        73 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~l~~~~~  145 (1236)
                      +++                               |+++|++++.+|.+|+||||+|++.|+.++++.|++...
T Consensus        97 v~~-------------------------------Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1          97 LKL-------------------------------LLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             HHH-------------------------------HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             ccc-------------------------------ccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            988                               999999999999999999999999999999999998653

>d1dxsa_ a.60.1.2 (A:) C-terminal domain of p73 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: C-terminal domain of p73
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.68  E-value=0.44  Score=34.59  Aligned_cols=52  Identities=25%  Similarity=0.466  Sum_probs=44.0

Q ss_pred             HHHhhhchHHHHHHHHHhcCC-HHHHhhcChhhhhhhCcccchhhhhhHHHHHH
Q psy8898         810 SCSTNLGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEK  862 (1236)
Q Consensus       810 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  862 (1236)
                      ..-...+..++.+.|.+.++. ++.+..+..+|+..+|+.. +++.++++.+..
T Consensus         4 ~wL~~lgL~~Y~~~F~~~G~~~l~~l~~lt~eDL~~lGI~~-~hr~kilk~i~~   56 (57)
T d1dxsa_           4 SFLTGLGCPNCIEYFTSQGLQSIYHLQNLTIEDLGALKIPE-QYRMTIWRGLQD   56 (57)
T ss_dssp             HHHHHTTCTTSHHHHHTTTCCCHHHHHTCCHHHHHHTTCCT-TTHHHHHHHHHH
T ss_pred             HHHHHCCcHHHHHHHHHccCCcHHHHHHhhHHHHHHcCCCH-HHHHHHHHHHHh
Confidence            344566777888999999986 9999999999999999975 899999998764

>d1ow5a_ a.60.1.2 (A:) Serine/threonine-protein kinase ste11 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Serine/threonine-protein kinase ste11
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.45  E-value=0.86  Score=33.43  Aligned_cols=54  Identities=20%  Similarity=0.329  Sum_probs=46.7

Q ss_pred             HHHhhhchHHHHHHHHHhc-CCHHHHhhcChhhhhhhCcccchhhhhhHHHHHHh
Q psy8898         810 SCSTNLGLKHLLELFEREQ-ITLDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKL  863 (1236)
Q Consensus       810 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  863 (1236)
                      .+-...+..++.+.|.+.+ ++.+.+..+..+++..+|++..+++.++++.++.+
T Consensus         5 ~wL~~lgL~~Y~~~F~~~~~i~~~~l~~l~~~dL~~lGI~~~ghr~ril~~i~~L   59 (60)
T d1ow5a_           5 LFLEEIGCTQYLDSFIQCNLVTEEEIKYLDKDILIALGVNKIGDRLKILRKSKSF   59 (60)
T ss_dssp             HHHHHHSCTHHHHHHHHHTCCCHHHHHHCCHHHHHHHTCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHCcCHHHHHHHHHcCCCcHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence            3445667788899998876 89999999999999999999999999999988764

>d1v38a_ a.60.1.2 (A:) Sam-domain protein samsn-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: SAM (sterile alpha motif) domain
domain: Sam-domain protein samsn-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.65  E-value=1.3  Score=34.57  Aligned_cols=62  Identities=23%  Similarity=0.278  Sum_probs=53.1

Q ss_pred             chhHHHhhhchHHHHHHHHHhcCC-HHHHhhcChhhhhhhCcccchhhhhhHHHHHHhhcCCC
Q psy8898         807 VIFSCSTNLGLKHLLELFEREQIT-LDILAEMNHEDLKQVGVSAYGYRHKLLKGIEKLCSSPS  868 (1236)
Q Consensus       807 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  868 (1236)
                      .+...-...++.++.+.|.+.++. ++.+..+..++++.+|+...+++.++++.+..+...++
T Consensus        14 ~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~l~~~dL~~lGI~~~~hr~kil~ai~~L~~~~s   76 (78)
T d1v38a_          14 TIQEFLERIHLQEYTSTLLLNGYETLDDLKDIKESHLIELNIADPEDRARLLSAAESLLSGPS   76 (78)
T ss_dssp             BHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHHHTTTCCHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHCCHHHHHHHHHHcCccchHHHccCCHHHHhHcCCCCHHHHHHHHHHHHHhhcCCC
Confidence            345556677888899999999885 78899999999999999999999999999999887654